Query 016820
Match_columns 382
No_of_seqs 229 out of 2790
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 04:20:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016820.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016820hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vdc_A NTR, NADPH dependent th 100.0 3.2E-46 1.1E-50 345.6 31.1 322 57-378 7-332 (333)
2 3itj_A Thioredoxin reductase 1 100.0 3.9E-46 1.3E-50 345.5 29.5 314 56-371 20-337 (338)
3 4a5l_A Thioredoxin reductase; 100.0 6.7E-46 2.3E-50 340.6 29.8 309 58-370 4-313 (314)
4 2q7v_A Thioredoxin reductase; 100.0 7.2E-44 2.5E-48 328.8 34.0 308 57-375 7-318 (325)
5 3r9u_A Thioredoxin reductase; 100.0 2E-44 6.7E-49 330.7 29.2 302 57-371 3-314 (315)
6 4gcm_A TRXR, thioredoxin reduc 100.0 4.7E-44 1.6E-48 328.2 31.4 305 57-372 5-309 (312)
7 2a87_A TRXR, TR, thioredoxin r 100.0 1E-44 3.6E-49 335.8 27.0 307 57-374 13-321 (335)
8 3f8d_A Thioredoxin reductase ( 100.0 7.5E-44 2.6E-48 327.9 31.8 304 57-373 14-321 (323)
9 2q0l_A TRXR, thioredoxin reduc 100.0 1.2E-43 4.1E-48 325.2 29.8 302 59-370 2-310 (311)
10 1trb_A Thioredoxin reductase; 100.0 1.5E-43 5.1E-48 325.8 26.8 307 57-373 4-318 (320)
11 3cty_A Thioredoxin reductase; 100.0 3.4E-43 1.2E-47 323.4 28.4 303 57-371 15-318 (319)
12 1fl2_A Alkyl hydroperoxide red 100.0 1.7E-42 5.8E-47 317.4 30.0 303 58-372 1-308 (310)
13 3lzw_A Ferredoxin--NADP reduct 100.0 1.5E-41 5.1E-46 313.8 25.9 304 57-374 6-320 (332)
14 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.3E-40 4.5E-45 325.1 32.5 305 56-373 210-520 (521)
15 2zbw_A Thioredoxin reductase; 100.0 9.2E-40 3.1E-44 302.5 30.5 310 57-379 4-327 (335)
16 3fbs_A Oxidoreductase; structu 100.0 8.5E-40 2.9E-44 297.3 24.4 288 58-372 2-295 (297)
17 3ab1_A Ferredoxin--NADP reduct 100.0 1.7E-38 5.8E-43 297.0 29.0 307 57-376 13-335 (360)
18 4fk1_A Putative thioredoxin re 100.0 5.8E-39 2E-43 293.2 22.8 293 56-372 4-303 (304)
19 4a9w_A Monooxygenase; baeyer-v 100.0 2.9E-38 9.8E-43 294.5 21.0 292 58-370 3-353 (357)
20 4eqs_A Coenzyme A disulfide re 100.0 5.7E-39 1.9E-43 307.0 15.8 287 59-365 1-309 (437)
21 3oc4_A Oxidoreductase, pyridin 100.0 1E-37 3.5E-42 300.2 21.1 288 59-366 3-313 (452)
22 3dk9_A Grase, GR, glutathione 100.0 4.9E-36 1.7E-40 290.6 29.2 294 56-366 18-355 (478)
23 1zmd_A Dihydrolipoyl dehydroge 100.0 1.8E-36 6.3E-41 293.3 25.8 295 57-366 5-344 (474)
24 3urh_A Dihydrolipoyl dehydroge 100.0 3.3E-36 1.1E-40 292.6 27.3 295 57-366 24-362 (491)
25 3dgz_A Thioredoxin reductase 2 100.0 5.4E-36 1.8E-40 290.8 26.2 299 57-366 5-351 (488)
26 1ebd_A E3BD, dihydrolipoamide 100.0 1E-35 3.4E-40 286.6 27.0 289 58-366 3-332 (455)
27 4g6h_A Rotenone-insensitive NA 100.0 3.6E-37 1.2E-41 298.7 16.9 295 56-367 40-399 (502)
28 3l8k_A Dihydrolipoyl dehydroge 100.0 3.3E-36 1.1E-40 290.7 22.8 291 58-366 4-332 (466)
29 3dgh_A TRXR-1, thioredoxin red 100.0 6.6E-36 2.3E-40 289.9 24.9 297 57-365 8-350 (483)
30 2qae_A Lipoamide, dihydrolipoy 100.0 8E-36 2.7E-40 288.3 25.1 293 58-366 2-339 (468)
31 1xdi_A RV3303C-LPDA; reductase 100.0 7.4E-36 2.5E-40 290.6 24.5 289 58-366 2-341 (499)
32 3qfa_A Thioredoxin reductase 1 100.0 1.8E-35 6.2E-40 288.8 27.3 299 56-365 30-378 (519)
33 3d1c_A Flavin-containing putat 100.0 4.3E-35 1.5E-39 274.7 28.7 291 58-369 4-339 (369)
34 2r9z_A Glutathione amide reduc 100.0 1.3E-35 4.3E-40 286.2 25.4 285 57-366 3-326 (463)
35 1v59_A Dihydrolipoamide dehydr 100.0 2.2E-35 7.4E-40 286.1 26.8 294 57-366 4-349 (478)
36 2wpf_A Trypanothione reductase 100.0 1.5E-35 5.1E-40 287.7 24.9 290 58-365 7-353 (495)
37 1fec_A Trypanothione reductase 100.0 1.7E-35 5.9E-40 287.1 25.1 291 58-366 3-350 (490)
38 1mo9_A ORF3; nucleotide bindin 100.0 2.5E-35 8.5E-40 288.2 26.4 292 57-366 42-377 (523)
39 2a8x_A Dihydrolipoyl dehydroge 100.0 1.8E-35 6E-40 285.6 24.9 289 58-366 3-333 (464)
40 3lxd_A FAD-dependent pyridine 100.0 5.9E-36 2E-40 284.9 20.6 289 57-366 8-320 (415)
41 2vdc_G Glutamate synthase [NAD 100.0 1.3E-36 4.3E-41 291.2 15.8 291 57-374 121-449 (456)
42 1ges_A Glutathione reductase; 100.0 7.5E-36 2.6E-40 286.8 21.3 284 58-366 4-327 (450)
43 3lad_A Dihydrolipoamide dehydr 100.0 6E-35 2E-39 282.9 27.7 294 57-365 2-341 (476)
44 1dxl_A Dihydrolipoamide dehydr 100.0 1.1E-35 3.9E-40 287.5 22.6 294 57-366 5-341 (470)
45 1ojt_A Surface protein; redox- 100.0 3.8E-35 1.3E-39 284.4 26.3 290 58-366 6-348 (482)
46 3iwa_A FAD-dependent pyridine 100.0 6.6E-36 2.3E-40 289.2 20.7 292 58-365 3-327 (472)
47 2eq6_A Pyruvate dehydrogenase 100.0 2E-35 6.9E-40 284.9 23.4 289 58-366 6-333 (464)
48 2hqm_A GR, grase, glutathione 100.0 3.4E-35 1.2E-39 284.4 25.1 289 57-366 10-346 (479)
49 1zk7_A HGII, reductase, mercur 100.0 1.3E-34 4.4E-39 279.8 29.0 286 58-366 4-333 (467)
50 3ef6_A Toluene 1,2-dioxygenase 100.0 7.3E-36 2.5E-40 283.6 19.3 284 59-366 3-308 (410)
51 2v3a_A Rubredoxin reductase; a 100.0 3.3E-35 1.1E-39 276.9 23.6 284 58-365 4-304 (384)
52 3o0h_A Glutathione reductase; 100.0 4.6E-35 1.6E-39 284.0 25.1 287 57-367 25-351 (484)
53 4b1b_A TRXR, thioredoxin reduc 100.0 7.9E-36 2.7E-40 290.2 19.6 295 57-366 41-383 (542)
54 2cdu_A NADPH oxidase; flavoenz 100.0 7.9E-36 2.7E-40 287.1 19.4 290 59-366 1-316 (452)
55 3kd9_A Coenzyme A disulfide re 100.0 6.4E-36 2.2E-40 287.5 18.7 285 58-365 3-313 (449)
56 3fg2_P Putative rubredoxin red 100.0 7.4E-36 2.5E-40 283.2 18.5 286 59-366 2-309 (404)
57 3ntd_A FAD-dependent pyridine 100.0 7.9E-36 2.7E-40 295.2 19.1 291 59-365 2-336 (565)
58 2bc0_A NADH oxidase; flavoprot 100.0 8.1E-36 2.8E-40 289.6 18.7 290 58-366 35-360 (490)
59 4dna_A Probable glutathione re 100.0 3.7E-35 1.3E-39 283.2 23.2 286 57-366 4-330 (463)
60 1onf_A GR, grase, glutathione 100.0 7.1E-35 2.4E-39 283.6 25.2 285 58-366 2-370 (500)
61 3ic9_A Dihydrolipoamide dehydr 100.0 4.5E-35 1.5E-39 284.3 23.4 291 57-367 7-338 (492)
62 3sx6_A Sulfide-quinone reducta 100.0 4.5E-36 1.5E-40 287.5 15.2 299 58-376 4-351 (437)
63 3ics_A Coenzyme A-disulfide re 100.0 5.6E-36 1.9E-40 297.3 16.2 292 56-366 34-352 (588)
64 2xve_A Flavin-containing monoo 100.0 1.5E-34 5.3E-39 278.4 25.5 278 59-365 3-337 (464)
65 2yqu_A 2-oxoglutarate dehydrog 100.0 4.7E-35 1.6E-39 281.9 21.5 286 59-366 2-326 (455)
66 1xhc_A NADH oxidase /nitrite r 100.0 6.5E-36 2.2E-40 279.6 14.7 279 58-366 8-296 (367)
67 3klj_A NAD(FAD)-dependent dehy 100.0 7.8E-37 2.7E-41 287.2 8.0 274 56-366 7-293 (385)
68 1q1r_A Putidaredoxin reductase 100.0 7.7E-35 2.6E-39 278.1 19.5 287 58-366 4-318 (431)
69 2gqw_A Ferredoxin reductase; f 100.0 6.1E-35 2.1E-39 277.0 18.6 279 57-366 6-307 (408)
70 1nhp_A NADH peroxidase; oxidor 100.0 8.8E-35 3E-39 279.4 19.5 289 59-366 1-315 (447)
71 1lvl_A Dihydrolipoamide dehydr 100.0 4.7E-34 1.6E-38 274.9 24.2 283 57-366 4-329 (458)
72 2x8g_A Thioredoxin glutathione 100.0 7.7E-34 2.6E-38 282.4 26.0 298 57-366 106-458 (598)
73 3cgb_A Pyridine nucleotide-dis 100.0 1.5E-34 5.1E-39 280.0 18.4 290 58-366 36-352 (480)
74 3vrd_B FCCB subunit, flavocyto 100.0 4.1E-35 1.4E-39 278.0 13.6 298 59-377 3-332 (401)
75 3hyw_A Sulfide-quinone reducta 100.0 3E-35 1E-39 281.0 10.0 296 59-374 3-338 (430)
76 3h8l_A NADH oxidase; membrane 100.0 2.2E-33 7.5E-38 266.8 15.6 296 59-378 2-346 (409)
77 2gv8_A Monooxygenase; FMO, FAD 100.0 4.1E-32 1.4E-36 260.8 24.4 281 57-366 5-359 (447)
78 3h28_A Sulfide-quinone reducta 100.0 4.6E-34 1.6E-38 273.1 9.5 295 58-374 2-338 (430)
79 1lqt_A FPRA; NADP+ derivative, 100.0 7.7E-33 2.6E-37 265.4 16.7 286 58-371 3-389 (456)
80 1cjc_A Protein (adrenodoxin re 100.0 7.4E-33 2.5E-37 265.8 16.5 291 57-372 5-398 (460)
81 1gte_A Dihydropyrimidine dehyd 100.0 5E-32 1.7E-36 282.9 20.2 290 57-370 186-509 (1025)
82 1m6i_A Programmed cell death p 100.0 9.5E-33 3.3E-37 267.9 13.5 297 57-366 10-351 (493)
83 2gag_A Heterotetrameric sarcos 100.0 4.4E-31 1.5E-35 274.0 22.8 287 57-369 127-444 (965)
84 3s5w_A L-ornithine 5-monooxyge 100.0 1.4E-30 4.8E-35 251.4 22.7 304 57-368 29-448 (463)
85 3gwf_A Cyclohexanone monooxyge 100.0 6.2E-30 2.1E-34 249.9 24.9 294 57-370 7-458 (540)
86 3k30_A Histamine dehydrogenase 100.0 9.3E-32 3.2E-36 271.0 11.5 279 56-378 389-684 (690)
87 1o94_A Tmadh, trimethylamine d 100.0 1.2E-31 4.1E-36 271.3 11.1 275 57-371 388-702 (729)
88 3uox_A Otemo; baeyer-villiger 100.0 6E-28 2.1E-32 236.1 26.7 294 57-370 8-467 (545)
89 1ps9_A 2,4-dienoyl-COA reducta 100.0 4.8E-29 1.6E-33 250.7 18.5 256 57-364 372-671 (671)
90 1y56_A Hypothetical protein PH 100.0 1.3E-29 4.5E-34 245.8 13.2 257 57-368 107-376 (493)
91 4ap3_A Steroid monooxygenase; 100.0 1.7E-27 5.9E-32 233.1 25.9 178 57-240 20-226 (549)
92 1w4x_A Phenylacetone monooxyge 100.0 5.5E-27 1.9E-31 230.1 29.0 296 57-371 15-468 (542)
93 4b63_A L-ornithine N5 monooxyg 99.9 4E-22 1.4E-26 193.5 26.3 307 57-369 38-488 (501)
94 2ywl_A Thioredoxin reductase r 99.9 7.6E-21 2.6E-25 159.4 15.0 155 207-374 3-176 (180)
95 3fpz_A Thiazole biosynthetic e 99.8 7.3E-22 2.5E-26 181.6 -9.5 255 56-369 63-325 (326)
96 2gqf_A Hypothetical protein HI 99.7 1.1E-17 3.9E-22 157.5 9.5 113 58-175 4-169 (401)
97 2e5v_A L-aspartate oxidase; ar 99.7 1.8E-18 6.1E-23 166.6 1.7 279 60-368 1-368 (472)
98 2cul_A Glucose-inhibited divis 99.7 2.1E-16 7.1E-21 137.8 13.0 116 58-181 3-132 (232)
99 2ywl_A Thioredoxin reductase r 99.6 2.8E-14 9.6E-19 119.1 14.0 111 59-176 2-112 (180)
100 3ces_A MNMG, tRNA uridine 5-ca 99.6 1.5E-13 5.2E-18 134.6 20.6 158 57-236 27-221 (651)
101 2zxi_A TRNA uridine 5-carboxym 99.5 4E-13 1.4E-17 131.1 19.5 159 57-237 26-221 (637)
102 3cp8_A TRNA uridine 5-carboxym 99.5 9.2E-13 3.1E-17 129.0 15.5 159 57-236 20-215 (641)
103 3v76_A Flavoprotein; structura 99.3 6.9E-12 2.4E-16 118.4 13.2 116 56-175 25-188 (417)
104 4b1b_A TRXR, thioredoxin reduc 99.2 3.5E-11 1.2E-15 117.0 10.5 129 27-178 191-323 (542)
105 3nix_A Flavoprotein/dehydrogen 99.2 1.6E-10 5.4E-15 109.5 12.7 121 57-177 4-169 (421)
106 3fmw_A Oxygenase; mithramycin, 99.2 2.4E-10 8.3E-15 112.2 13.1 120 57-176 48-209 (570)
107 1rp0_A ARA6, thiazole biosynth 99.1 4.1E-10 1.4E-14 100.9 13.4 118 56-177 37-194 (284)
108 2bry_A NEDD9 interacting prote 99.1 2.2E-10 7.4E-15 110.9 12.0 121 57-181 91-237 (497)
109 3oz2_A Digeranylgeranylglycero 99.1 2.3E-10 7.8E-15 107.1 11.6 120 57-176 3-164 (397)
110 1rp0_A ARA6, thiazole biosynth 99.1 1.6E-10 5.3E-15 103.6 9.9 165 206-372 40-278 (284)
111 2x3n_A Probable FAD-dependent 99.1 2.4E-10 8.1E-15 107.6 11.6 120 57-176 5-168 (399)
112 2i0z_A NAD(FAD)-utilizing dehy 99.1 2.3E-10 7.8E-15 109.4 11.2 114 57-174 25-191 (447)
113 1ryi_A Glycine oxidase; flavop 99.1 2.4E-10 8.2E-15 106.8 10.9 58 117-174 161-219 (382)
114 3k7m_X 6-hydroxy-L-nicotine ox 99.1 9.7E-12 3.3E-16 118.3 1.1 90 244-343 207-306 (431)
115 3e1t_A Halogenase; flavoprotei 99.1 7.7E-10 2.6E-14 107.5 14.1 121 57-177 6-175 (512)
116 3cgv_A Geranylgeranyl reductas 99.1 4.2E-10 1.4E-14 105.6 11.6 119 57-175 3-163 (397)
117 3ihg_A RDME; flavoenzyme, anth 99.1 4.8E-10 1.6E-14 109.7 11.9 120 57-176 4-185 (535)
118 2yqu_A 2-oxoglutarate dehydrog 99.1 5.9E-10 2E-14 106.8 11.6 101 57-178 166-268 (455)
119 3rp8_A Flavoprotein monooxygen 99.1 4.5E-10 1.5E-14 106.0 10.5 120 56-177 21-184 (407)
120 2qa2_A CABE, polyketide oxygen 99.1 1E-09 3.6E-14 106.1 13.2 120 56-175 10-167 (499)
121 3i3l_A Alkylhalidase CMLS; fla 99.1 7.7E-10 2.6E-14 108.9 12.3 119 57-175 22-189 (591)
122 2xdo_A TETX2 protein; tetracyc 99.1 1.1E-09 3.7E-14 103.1 12.6 121 56-178 24-186 (398)
123 2qa1_A PGAE, polyketide oxygen 99.1 1E-09 3.5E-14 106.2 12.6 120 56-175 9-166 (500)
124 2eq6_A Pyruvate dehydrogenase 99.0 9.3E-10 3.2E-14 105.6 11.8 101 57-178 168-275 (464)
125 1y56_B Sarcosine oxidase; dehy 99.0 2.3E-09 7.9E-14 100.1 13.9 57 118-174 147-205 (382)
126 3nlc_A Uncharacterized protein 99.0 2.1E-09 7.1E-14 104.5 13.9 119 57-175 106-278 (549)
127 3alj_A 2-methyl-3-hydroxypyrid 99.0 5.6E-10 1.9E-14 104.3 9.6 118 57-177 10-163 (379)
128 1y0p_A Fumarate reductase flav 99.0 1.6E-09 5.5E-14 106.7 12.9 119 57-175 125-318 (571)
129 1ebd_A E3BD, dihydrolipoamide 99.0 1.3E-09 4.3E-14 104.5 11.8 101 57-178 169-274 (455)
130 2gmh_A Electron transfer flavo 99.0 3.2E-09 1.1E-13 104.6 14.5 119 57-175 34-218 (584)
131 2vou_A 2,6-dihydroxypyridine h 99.0 1.4E-09 4.9E-14 102.1 11.5 118 57-176 4-155 (397)
132 3oc4_A Oxidoreductase, pyridin 99.0 5.4E-09 1.9E-13 99.9 15.3 103 57-179 146-249 (452)
133 3pl8_A Pyranose 2-oxidase; sub 99.0 5.5E-13 1.9E-17 132.2 -12.9 61 251-311 270-330 (623)
134 1zk7_A HGII, reductase, mercur 99.0 1.6E-09 5.3E-14 104.2 11.5 99 57-177 175-274 (467)
135 3dme_A Conserved exported prot 99.0 3.6E-09 1.2E-13 98.0 13.3 57 118-174 148-209 (369)
136 1k0i_A P-hydroxybenzoate hydro 99.0 1.5E-09 5.1E-14 101.9 10.4 120 58-177 2-166 (394)
137 3nyc_A D-arginine dehydrogenas 99.0 1.7E-09 5.7E-14 100.8 10.5 57 118-174 152-209 (381)
138 1yvv_A Amine oxidase, flavin-c 99.0 4.4E-09 1.5E-13 96.3 13.1 107 58-173 2-161 (336)
139 3dje_A Fructosyl amine: oxygen 99.0 4.8E-09 1.6E-13 99.9 13.7 56 119-174 160-221 (438)
140 3atr_A Conserved archaeal prot 99.0 2.4E-09 8.3E-14 102.4 11.6 121 57-177 5-165 (453)
141 2uzz_A N-methyl-L-tryptophan o 99.0 2.8E-09 9.7E-14 99.0 11.7 55 120-174 149-204 (372)
142 1nhp_A NADH peroxidase; oxidor 99.0 3.2E-09 1.1E-13 101.4 12.2 104 57-180 148-252 (447)
143 1qo8_A Flavocytochrome C3 fuma 99.0 5.3E-09 1.8E-13 102.8 14.0 119 57-175 120-313 (566)
144 1zmd_A Dihydrolipoyl dehydroge 99.0 3.1E-09 1.1E-13 102.3 12.1 102 57-178 177-286 (474)
145 3qj4_A Renalase; FAD/NAD(P)-bi 99.0 1E-09 3.6E-14 100.9 8.0 110 59-172 2-163 (342)
146 2a8x_A Dihydrolipoyl dehydroge 99.0 3.4E-09 1.2E-13 101.7 11.7 101 57-178 170-275 (464)
147 2r9z_A Glutathione amide reduc 99.0 2.7E-09 9.2E-14 102.3 11.0 100 57-177 165-267 (463)
148 1lvl_A Dihydrolipoamide dehydr 99.0 1.5E-09 5.1E-14 104.0 9.2 99 57-178 170-272 (458)
149 2oln_A NIKD protein; flavoprot 98.9 6.8E-09 2.3E-13 97.5 13.4 54 120-173 153-207 (397)
150 1ges_A Glutathione reductase; 98.9 3.6E-09 1.2E-13 101.1 11.6 100 57-177 166-268 (450)
151 1onf_A GR, grase, glutathione 98.9 4.3E-09 1.5E-13 102.0 12.2 99 58-177 176-278 (500)
152 2gf3_A MSOX, monomeric sarcosi 98.9 5E-09 1.7E-13 97.9 12.1 56 119-174 149-205 (389)
153 1v59_A Dihydrolipoamide dehydr 98.9 3.9E-09 1.3E-13 101.7 11.3 100 57-177 182-290 (478)
154 1ojt_A Surface protein; redox- 98.9 2.3E-09 7.8E-14 103.4 9.4 100 57-177 184-289 (482)
155 2qae_A Lipoamide, dihydrolipoy 98.9 5.7E-09 1.9E-13 100.3 11.9 101 57-178 173-280 (468)
156 1xdi_A RV3303C-LPDA; reductase 98.9 7.5E-09 2.6E-13 100.2 12.8 101 57-178 181-283 (499)
157 2hqm_A GR, grase, glutathione 98.9 4.8E-09 1.6E-13 101.1 11.3 99 57-176 184-287 (479)
158 3ps9_A TRNA 5-methylaminomethy 98.9 1.2E-08 4E-13 102.6 14.4 57 118-174 415-473 (676)
159 3pvc_A TRNA 5-methylaminomethy 98.9 1.3E-08 4.4E-13 102.5 14.7 57 118-174 410-469 (689)
160 3c96_A Flavin-containing monoo 98.9 5.2E-09 1.8E-13 98.8 10.9 117 58-176 4-171 (410)
161 3ic9_A Dihydrolipoamide dehydr 98.9 6E-09 2.1E-13 100.7 11.4 100 57-178 173-278 (492)
162 1fec_A Trypanothione reductase 98.9 8.9E-09 3E-13 99.4 12.6 100 57-177 186-291 (490)
163 4at0_A 3-ketosteroid-delta4-5a 98.9 1.4E-08 4.9E-13 98.5 14.1 54 121-174 203-264 (510)
164 2v3a_A Rubredoxin reductase; a 98.9 9.1E-09 3.1E-13 96.2 12.2 100 58-177 145-246 (384)
165 3urh_A Dihydrolipoyl dehydroge 98.9 8.8E-09 3E-13 99.6 12.3 101 57-178 197-304 (491)
166 1dxl_A Dihydrolipoamide dehydr 98.9 4.4E-09 1.5E-13 101.1 10.1 101 57-178 176-283 (470)
167 2gag_B Heterotetrameric sarcos 98.9 1.9E-08 6.6E-13 94.5 14.1 56 119-174 173-230 (405)
168 1mo9_A ORF3; nucleotide bindin 98.9 8E-09 2.7E-13 100.6 11.6 98 59-177 215-319 (523)
169 3lad_A Dihydrolipoamide dehydr 98.9 1.1E-08 3.7E-13 98.6 12.2 101 57-178 179-284 (476)
170 2r0c_A REBC; flavin adenine di 98.9 1.7E-08 5.9E-13 98.8 13.5 118 56-176 24-198 (549)
171 2bc0_A NADH oxidase; flavoprot 98.9 1.3E-08 4.5E-13 98.3 12.5 101 57-177 193-294 (490)
172 2wpf_A Trypanothione reductase 98.9 1.1E-08 3.6E-13 99.0 11.8 100 57-177 190-295 (495)
173 3dk9_A Grase, GR, glutathione 98.9 1.3E-08 4.5E-13 98.0 12.2 101 57-178 186-297 (478)
174 3o0h_A Glutathione reductase; 98.9 1.9E-08 6.5E-13 97.0 13.3 101 57-178 190-292 (484)
175 3jsk_A Cypbp37 protein; octame 98.9 1.9E-08 6.6E-13 91.3 12.4 115 57-175 78-252 (344)
176 1d4d_A Flavocytochrome C fumar 98.8 3.2E-08 1.1E-12 97.3 14.4 115 57-175 125-318 (572)
177 2cdu_A NADPH oxidase; flavoenz 98.8 1.6E-08 5.5E-13 96.6 11.9 101 57-177 148-250 (452)
178 3c4n_A Uncharacterized protein 98.8 5.1E-09 1.8E-13 98.6 8.1 56 119-174 171-236 (405)
179 3cgb_A Pyridine nucleotide-dis 98.8 1.3E-08 4.6E-13 98.0 10.8 100 57-177 185-285 (480)
180 2qcu_A Aerobic glycerol-3-phos 98.8 4E-08 1.4E-12 95.2 13.8 57 118-174 147-210 (501)
181 4dna_A Probable glutathione re 98.8 1.9E-08 6.5E-13 96.5 11.4 101 57-178 169-272 (463)
182 2pyx_A Tryptophan halogenase; 98.8 5.6E-08 1.9E-12 94.7 14.6 59 118-176 173-235 (526)
183 2aqj_A Tryptophan halogenase, 98.8 2.9E-08 1E-12 97.0 12.5 58 119-176 164-224 (538)
184 3dgz_A Thioredoxin reductase 2 98.8 1.9E-08 6.4E-13 97.2 10.8 100 57-178 184-291 (488)
185 3qfa_A Thioredoxin reductase 1 98.8 2.4E-08 8E-13 97.2 11.5 100 57-178 209-319 (519)
186 3lxd_A FAD-dependent pyridine 98.8 4.7E-08 1.6E-12 92.3 13.3 100 58-177 152-254 (415)
187 1xhc_A NADH oxidase /nitrite r 98.8 1.2E-08 4.1E-13 94.7 8.9 94 58-177 143-237 (367)
188 3dgh_A TRXR-1, thioredoxin red 98.8 1.5E-08 5.3E-13 97.6 9.9 99 57-177 186-292 (483)
189 3da1_A Glycerol-3-phosphate de 98.8 5.1E-08 1.7E-12 95.6 13.5 57 118-174 168-232 (561)
190 3ka7_A Oxidoreductase; structu 98.8 5.1E-08 1.7E-12 92.3 12.9 51 123-173 199-251 (425)
191 3nrn_A Uncharacterized protein 98.8 2.6E-08 9E-13 94.2 10.5 48 125-173 194-242 (421)
192 2gjc_A Thiazole biosynthetic e 98.8 4.9E-08 1.7E-12 88.1 11.4 115 57-175 64-240 (326)
193 2weu_A Tryptophan 5-halogenase 98.8 4.9E-08 1.7E-12 94.8 12.2 60 117-176 170-232 (511)
194 2gqw_A Ferredoxin reductase; f 98.8 5.8E-08 2E-12 91.5 12.2 96 58-177 145-242 (408)
195 3ef6_A Toluene 1,2-dioxygenase 98.7 2.3E-08 8E-13 94.3 9.0 100 58-177 143-244 (410)
196 3fg2_P Putative rubredoxin red 98.7 6.6E-08 2.3E-12 91.0 11.9 99 58-176 142-243 (404)
197 1q1r_A Putidaredoxin reductase 98.7 7.4E-08 2.5E-12 91.4 11.9 100 58-177 149-253 (431)
198 3iwa_A FAD-dependent pyridine 98.7 9E-08 3.1E-12 92.0 12.3 100 58-177 159-261 (472)
199 2dkh_A 3-hydroxybenzoate hydro 98.7 6.3E-08 2.2E-12 96.5 11.4 120 57-176 31-213 (639)
200 2e4g_A Tryptophan halogenase; 98.7 1.5E-07 5.2E-12 92.1 13.9 60 117-176 191-254 (550)
201 4hb9_A Similarities with proba 98.7 4.7E-08 1.6E-12 91.9 9.9 115 59-176 2-168 (412)
202 3kd9_A Coenzyme A disulfide re 98.7 1.3E-07 4.5E-12 90.2 12.3 99 58-177 148-247 (449)
203 4eqs_A Coenzyme A disulfide re 98.7 5.9E-08 2E-12 92.2 9.8 96 58-177 147-243 (437)
204 3ntd_A FAD-dependent pyridine 98.7 1.3E-07 4.3E-12 93.1 12.3 100 57-177 150-270 (565)
205 4gde_A UDP-galactopyranose mut 98.6 2.1E-08 7.2E-13 97.3 6.0 40 57-100 9-49 (513)
206 1kf6_A Fumarate reductase flav 98.6 1.9E-07 6.5E-12 92.2 12.7 119 57-175 4-198 (602)
207 1m6i_A Programmed cell death p 98.6 1.4E-07 4.7E-12 91.1 11.4 100 58-177 180-285 (493)
208 1pj5_A N,N-dimethylglycine oxi 98.6 1.9E-07 6.4E-12 96.0 13.0 57 118-174 149-207 (830)
209 3ics_A Coenzyme A-disulfide re 98.6 1.1E-07 3.8E-12 93.9 10.6 99 57-177 186-285 (588)
210 3kkj_A Amine oxidase, flavin-c 98.6 2.7E-08 9.3E-13 87.7 5.6 41 58-102 2-42 (336)
211 1trb_A Thioredoxin reductase; 98.6 1.9E-07 6.5E-12 84.7 11.1 99 57-178 144-251 (320)
212 3l8k_A Dihydrolipoyl dehydroge 98.6 1E-07 3.4E-12 91.5 9.5 98 57-177 171-275 (466)
213 1pn0_A Phenol 2-monooxygenase; 98.6 3.5E-07 1.2E-11 91.4 13.0 34 57-90 7-45 (665)
214 3c4a_A Probable tryptophan hyd 98.6 2.6E-08 8.9E-13 93.0 4.2 106 59-175 1-144 (381)
215 3axb_A Putative oxidoreductase 98.6 1.4E-07 4.8E-12 90.0 9.3 56 119-174 180-254 (448)
216 2x8g_A Thioredoxin glutathione 98.6 1.7E-07 5.8E-12 92.8 10.2 99 57-177 285-398 (598)
217 3oz2_A Digeranylgeranylglycero 98.6 1E-06 3.5E-11 82.1 15.0 94 207-305 6-162 (397)
218 3nks_A Protoporphyrinogen oxid 98.6 2.5E-07 8.7E-12 88.8 11.0 50 123-172 237-288 (477)
219 3klj_A NAD(FAD)-dependent dehy 98.6 1.9E-08 6.4E-13 94.0 2.7 88 58-177 146-234 (385)
220 2wdq_A Succinate dehydrogenase 98.5 8.5E-07 2.9E-11 87.3 14.0 56 119-174 142-206 (588)
221 3i6d_A Protoporphyrinogen oxid 98.5 2.9E-07 9.8E-12 88.2 10.2 38 135-172 248-287 (470)
222 2zbw_A Thioredoxin reductase; 98.5 3.5E-07 1.2E-11 83.5 10.1 98 57-177 151-255 (335)
223 2bs2_A Quinol-fumarate reducta 98.5 7.9E-07 2.7E-11 88.5 13.1 50 319-369 372-429 (660)
224 2h88_A Succinate dehydrogenase 98.5 8.1E-07 2.8E-11 87.8 12.7 56 119-174 154-217 (621)
225 2rgh_A Alpha-glycerophosphate 98.5 1.2E-06 4E-11 86.1 13.5 34 57-90 31-64 (571)
226 3d1c_A Flavin-containing putat 98.5 8.7E-07 3E-11 82.0 12.1 106 58-177 166-275 (369)
227 1chu_A Protein (L-aspartate ox 98.5 4.3E-07 1.5E-11 88.5 10.1 50 319-369 354-411 (540)
228 4g6h_A Rotenone-insensitive NA 98.5 3.4E-07 1.2E-11 88.4 9.2 96 59-175 218-333 (502)
229 2bry_A NEDD9 interacting prote 98.5 2.9E-08 1E-12 95.9 1.3 145 162-307 37-232 (497)
230 3ab1_A Ferredoxin--NADP reduct 98.5 6.5E-07 2.2E-11 82.7 10.3 98 57-177 162-266 (360)
231 2cul_A Glucose-inhibited divis 98.4 8.5E-07 2.9E-11 76.7 9.2 152 206-368 4-231 (232)
232 3g5s_A Methylenetetrahydrofola 98.4 6.2E-07 2.1E-11 82.1 7.8 49 328-378 322-371 (443)
233 2q7v_A Thioredoxin reductase; 98.4 9.4E-07 3.2E-11 80.3 8.4 95 57-177 151-252 (325)
234 3jsk_A Cypbp37 protein; octame 98.3 1.3E-06 4.4E-11 79.3 8.8 167 206-374 80-340 (344)
235 3cty_A Thioredoxin reductase; 98.3 1.7E-06 5.8E-11 78.4 9.6 93 58-177 155-255 (319)
236 3itj_A Thioredoxin reductase 1 98.3 1.9E-06 6.6E-11 78.5 9.8 94 57-177 172-274 (338)
237 3f8d_A Thioredoxin reductase ( 98.3 2.8E-06 9.5E-11 76.8 10.6 94 57-176 153-253 (323)
238 3r9u_A Thioredoxin reductase; 98.3 8.8E-07 3E-11 79.9 7.2 96 57-178 146-248 (315)
239 3s5w_A L-ornithine 5-monooxyge 98.3 4.3E-07 1.5E-11 86.9 5.2 119 57-175 226-378 (463)
240 2q0l_A TRXR, thioredoxin reduc 98.3 2.3E-06 7.7E-11 77.2 9.7 95 57-177 142-244 (311)
241 4a9w_A Monooxygenase; baeyer-v 98.3 3.1E-06 1.1E-10 77.6 10.5 90 206-304 4-131 (357)
242 3gyx_A Adenylylsulfate reducta 98.3 3.3E-06 1.1E-10 84.0 11.2 45 328-372 447-492 (662)
243 1jnr_A Adenylylsulfate reducta 98.3 7.9E-06 2.7E-10 81.3 13.7 35 57-91 21-59 (643)
244 1fl2_A Alkyl hydroperoxide red 98.3 4E-06 1.4E-10 75.5 10.4 94 57-177 143-245 (310)
245 3h8l_A NADH oxidase; membrane 98.3 2.7E-06 9.2E-11 80.0 9.4 98 206-311 2-119 (409)
246 1vdc_A NTR, NADPH dependent th 98.2 2.8E-06 9.5E-11 77.4 8.5 96 57-178 158-263 (333)
247 3fbs_A Oxidoreductase; structu 98.2 5.3E-06 1.8E-10 74.0 10.1 94 206-309 3-116 (297)
248 3hyw_A Sulfide-quinone reducta 98.2 2.8E-06 9.4E-11 80.5 8.4 90 206-306 3-110 (430)
249 3lzw_A Ferredoxin--NADP reduct 98.2 9E-06 3.1E-10 73.8 11.2 95 206-308 8-129 (332)
250 2a87_A TRXR, TR, thioredoxin r 98.2 3.4E-06 1.2E-10 77.0 8.1 97 57-179 154-257 (335)
251 2e1m_A L-glutamate oxidase; L- 98.2 1.9E-06 6.4E-11 79.7 6.3 78 57-138 43-130 (376)
252 4dgk_A Phytoene dehydrogenase; 98.2 1E-06 3.6E-11 85.1 4.8 51 124-174 225-278 (501)
253 3k30_A Histamine dehydrogenase 98.2 2.2E-06 7.6E-11 86.1 7.2 98 58-177 523-627 (690)
254 2gjc_A Thiazole biosynthetic e 98.2 6.1E-06 2.1E-10 74.4 9.2 162 207-369 67-325 (326)
255 1ps9_A 2,4-dienoyl-COA reducta 98.2 3.6E-06 1.2E-10 84.4 8.3 119 57-177 493-631 (671)
256 4gcm_A TRXR, thioredoxin reduc 98.1 5.5E-06 1.9E-10 74.7 8.5 95 57-177 144-246 (312)
257 4a5l_A Thioredoxin reductase; 98.1 5.6E-06 1.9E-10 74.6 8.4 97 57-179 151-255 (314)
258 3sx6_A Sulfide-quinone reducta 98.1 8.3E-06 2.8E-10 77.4 9.5 95 206-311 5-118 (437)
259 1hyu_A AHPF, alkyl hydroperoxi 98.1 1.5E-05 5.2E-10 77.3 11.3 94 57-177 354-456 (521)
260 4gut_A Lysine-specific histone 98.1 2E-05 6.7E-10 79.8 11.7 33 57-89 335-367 (776)
261 1s3e_A Amine oxidase [flavin-c 98.1 4.5E-06 1.6E-10 81.1 6.7 42 58-103 4-45 (520)
262 2b9w_A Putative aminooxidase; 98.1 3.6E-06 1.2E-10 79.4 5.9 43 57-103 5-48 (424)
263 1rsg_A FMS1 protein; FAD bindi 98.1 2.8E-06 9.7E-11 82.4 5.2 40 57-100 7-47 (516)
264 3v76_A Flavoprotein; structura 98.1 1.8E-05 6E-10 74.5 10.3 93 205-306 27-188 (417)
265 3vrd_B FCCB subunit, flavocyto 98.0 7.1E-06 2.4E-10 76.9 7.5 96 205-311 2-114 (401)
266 2xve_A Flavin-containing monoo 98.0 3.6E-05 1.2E-09 73.6 11.7 135 206-343 3-207 (464)
267 2bcg_G Secretory pathway GDP d 98.0 5.7E-06 1.9E-10 78.9 5.9 43 57-103 10-52 (453)
268 2yg5_A Putrescine oxidase; oxi 98.0 4.8E-06 1.7E-10 79.3 5.3 42 57-102 4-45 (453)
269 3h28_A Sulfide-quinone reducta 98.0 1.2E-05 4.3E-10 76.0 7.9 92 206-308 3-112 (430)
270 3nlc_A Uncharacterized protein 98.0 1.6E-05 5.4E-10 77.2 8.5 95 205-306 107-278 (549)
271 1v0j_A UDP-galactopyranose mut 98.0 6.6E-06 2.2E-10 77.1 5.6 42 58-103 7-49 (399)
272 2ivd_A PPO, PPOX, protoporphyr 98.0 5.5E-06 1.9E-10 79.5 5.0 46 53-102 11-56 (478)
273 2gag_A Heterotetrameric sarcos 97.9 2.1E-05 7.2E-10 81.9 9.2 88 59-176 285-385 (965)
274 4fk1_A Putative thioredoxin re 97.9 4.6E-05 1.6E-09 68.4 10.3 97 206-310 7-122 (304)
275 3hdq_A UDP-galactopyranose mut 97.9 9.2E-06 3.1E-10 75.7 5.7 43 57-103 28-70 (397)
276 2jae_A L-amino acid oxidase; o 97.9 9.1E-06 3.1E-10 78.3 5.5 41 57-101 10-50 (489)
277 4ap3_A Steroid monooxygenase; 97.9 5.5E-05 1.9E-09 73.8 11.0 97 206-308 22-164 (549)
278 2gv8_A Monooxygenase; FMO, FAD 97.9 0.00011 3.6E-09 69.9 12.5 101 205-308 6-182 (447)
279 3ihm_A Styrene monooxygenase A 97.9 7.3E-06 2.5E-10 77.6 4.2 34 57-90 21-54 (430)
280 2vvm_A Monoamine oxidase N; FA 97.9 1.1E-05 3.9E-10 77.7 5.2 41 58-102 39-79 (495)
281 1i8t_A UDP-galactopyranose mut 97.8 1.3E-05 4.4E-10 74.2 5.1 41 59-103 2-42 (367)
282 4dsg_A UDP-galactopyranose mut 97.8 1.7E-05 5.7E-10 76.3 5.9 44 56-103 7-51 (484)
283 1o94_A Tmadh, trimethylamine d 97.8 9.3E-06 3.2E-10 82.1 4.3 97 58-177 528-649 (729)
284 1c0p_A D-amino acid oxidase; a 97.8 1.3E-05 4.4E-10 74.0 4.9 34 57-90 5-38 (363)
285 2vdc_G Glutamate synthase [NAD 97.8 1.8E-05 6.1E-10 75.4 6.0 95 57-176 263-380 (456)
286 2gqf_A Hypothetical protein HI 97.8 7.8E-05 2.7E-09 69.7 10.2 93 206-307 5-170 (401)
287 3lov_A Protoporphyrinogen oxid 97.8 1.3E-05 4.4E-10 76.8 4.9 40 58-101 4-45 (475)
288 3alj_A 2-methyl-3-hydroxypyrid 97.8 6.3E-05 2.2E-09 69.8 9.5 91 205-306 11-161 (379)
289 2x3n_A Probable FAD-dependent 97.8 9.5E-05 3.2E-09 69.1 10.5 93 206-306 7-167 (399)
290 2bi7_A UDP-galactopyranose mut 97.8 1.8E-05 6.1E-10 73.7 5.1 42 58-103 3-44 (384)
291 3i3l_A Alkylhalidase CMLS; fla 97.8 0.00012 4E-09 72.0 11.1 98 205-306 23-189 (591)
292 1sez_A Protoporphyrinogen oxid 97.8 1.7E-05 5.9E-10 76.6 4.9 41 58-102 13-53 (504)
293 1yvv_A Amine oxidase, flavin-c 97.8 9.8E-05 3.4E-09 67.0 9.7 90 206-304 3-161 (336)
294 2iid_A L-amino-acid oxidase; f 97.8 2E-05 6.8E-10 76.1 5.1 42 57-102 32-73 (498)
295 3e1t_A Halogenase; flavoprotei 97.8 0.00015 5.1E-09 70.2 11.2 97 206-305 8-172 (512)
296 3gwf_A Cyclohexanone monooxyge 97.7 0.00012 4E-09 71.3 10.0 97 206-308 9-152 (540)
297 2vou_A 2,6-dihydroxypyridine h 97.7 0.00015 5.2E-09 67.7 10.5 94 205-306 5-154 (397)
298 1cjc_A Protein (adrenodoxin re 97.7 0.0001 3.5E-09 70.3 9.4 32 58-89 145-197 (460)
299 3cgv_A Geranylgeranyl reductas 97.7 0.00011 3.9E-09 68.3 9.6 96 206-305 5-162 (397)
300 3uox_A Otemo; baeyer-villiger 97.7 0.00013 4.4E-09 71.1 10.1 97 206-308 10-152 (545)
301 3atr_A Conserved archaeal prot 97.7 0.0002 6.8E-09 68.1 11.3 98 206-305 7-162 (453)
302 3g3e_A D-amino-acid oxidase; F 97.7 4.9E-05 1.7E-09 69.7 6.7 32 59-90 1-38 (351)
303 3nix_A Flavoprotein/dehydrogen 97.7 0.0001 3.4E-09 69.3 8.8 95 206-305 6-166 (421)
304 4hb9_A Similarities with proba 97.7 0.00029 1E-08 65.7 11.5 35 206-240 2-36 (412)
305 3qj4_A Renalase; FAD/NAD(P)-bi 97.7 0.00012 4.2E-09 66.8 8.7 89 207-303 3-163 (342)
306 3rp8_A Flavoprotein monooxygen 97.7 0.00027 9.1E-09 66.2 11.2 93 204-306 22-182 (407)
307 1lqt_A FPRA; NADP+ derivative, 97.6 0.00018 6E-09 68.5 9.8 116 57-176 146-328 (456)
308 1gte_A Dihydropyrimidine dehyd 97.6 0.00023 7.9E-09 74.6 11.5 93 58-175 332-443 (1025)
309 1d5t_A Guanine nucleotide diss 97.6 5.8E-05 2E-09 71.5 5.8 42 58-103 6-47 (433)
310 3p1w_A Rabgdi protein; GDI RAB 97.5 7.4E-05 2.5E-09 71.0 5.5 42 57-102 19-60 (475)
311 1y0p_A Fumarate reductase flav 97.5 0.00055 1.9E-08 67.1 11.5 99 205-305 126-317 (571)
312 1b37_A Protein (polyamine oxid 97.5 8.2E-05 2.8E-09 71.2 5.3 33 57-89 3-36 (472)
313 1k0i_A P-hydroxybenzoate hydro 97.5 0.00039 1.3E-08 64.7 9.8 97 206-306 3-164 (394)
314 2z3y_A Lysine-specific histone 97.5 8.2E-05 2.8E-09 74.3 5.3 41 56-100 105-145 (662)
315 1qo8_A Flavocytochrome C3 fuma 97.5 0.00045 1.5E-08 67.7 10.5 98 206-305 122-312 (566)
316 2i0z_A NAD(FAD)-utilizing dehy 97.5 0.00036 1.2E-08 66.3 9.3 93 206-305 27-191 (447)
317 2qa1_A PGAE, polyketide oxygen 97.5 0.00072 2.5E-08 65.1 11.4 97 204-305 10-165 (500)
318 2xag_A Lysine-specific histone 97.5 9.5E-05 3.2E-09 75.4 5.4 44 330-373 790-834 (852)
319 2qa2_A CABE, polyketide oxygen 97.5 0.00073 2.5E-08 65.0 11.3 97 204-305 11-166 (499)
320 3dme_A Conserved exported prot 97.4 0.00043 1.5E-08 63.5 9.1 33 206-238 5-37 (369)
321 1y56_A Hypothetical protein PH 97.4 0.00021 7.1E-09 68.8 7.0 97 206-309 109-223 (493)
322 2xdo_A TETX2 protein; tetracyc 97.4 0.00065 2.2E-08 63.3 10.2 35 205-239 26-60 (398)
323 3fmw_A Oxygenase; mithramycin, 97.4 0.00041 1.4E-08 68.0 8.3 94 206-305 50-207 (570)
324 3ihg_A RDME; flavoenzyme, anth 97.3 0.00085 2.9E-08 65.2 10.2 99 206-305 6-183 (535)
325 3ces_A MNMG, tRNA uridine 5-ca 97.3 0.0009 3.1E-08 65.8 10.2 92 206-305 29-181 (651)
326 1ryi_A Glycine oxidase; flavop 97.3 0.00065 2.2E-08 62.8 8.9 33 206-238 18-50 (382)
327 1d4d_A Flavocytochrome C fumar 97.3 0.0018 6.1E-08 63.5 12.2 99 205-305 126-317 (572)
328 2zxi_A TRNA uridine 5-carboxym 97.3 0.00085 2.9E-08 65.7 9.5 92 206-305 28-180 (637)
329 1kdg_A CDH, cellobiose dehydro 97.3 0.00021 7.2E-09 69.7 5.3 34 57-90 6-39 (546)
330 2uzz_A N-methyl-L-tryptophan o 97.3 0.00077 2.6E-08 62.0 8.7 32 207-238 4-35 (372)
331 4dgk_A Phytoene dehydrogenase; 97.3 0.00056 1.9E-08 65.8 7.9 34 206-239 2-35 (501)
332 3c96_A Flavin-containing monoo 97.2 0.00099 3.4E-08 62.3 9.4 35 206-240 5-40 (410)
333 4at0_A 3-ketosteroid-delta4-5a 97.2 0.0019 6.4E-08 62.4 11.3 50 253-305 214-264 (510)
334 3nyc_A D-arginine dehydrogenas 97.2 0.001 3.4E-08 61.3 8.9 33 205-238 9-41 (381)
335 3ps9_A TRNA 5-methylaminomethy 97.2 0.0015 5.3E-08 65.3 10.7 34 205-238 272-305 (676)
336 1y56_B Sarcosine oxidase; dehy 97.2 0.0022 7.4E-08 59.2 10.7 33 206-238 6-38 (382)
337 1w4x_A Phenylacetone monooxyge 97.2 0.0025 8.7E-08 61.9 11.6 93 206-304 17-153 (542)
338 3cp8_A TRNA uridine 5-carboxym 97.1 0.0021 7.2E-08 63.1 9.9 91 206-304 22-173 (641)
339 3da1_A Glycerol-3-phosphate de 97.1 0.0031 1.1E-07 61.6 11.1 51 253-305 182-232 (561)
340 2gag_B Heterotetrameric sarcos 97.1 0.0016 5.3E-08 60.7 8.7 33 206-238 22-56 (405)
341 3ayj_A Pro-enzyme of L-phenyla 97.0 0.00035 1.2E-08 69.6 4.0 32 58-89 56-95 (721)
342 3pvc_A TRNA 5-methylaminomethy 97.0 0.0028 9.7E-08 63.5 10.2 34 205-238 264-297 (689)
343 3q9t_A Choline dehydrogenase a 97.0 0.00044 1.5E-08 67.6 4.1 34 57-90 5-39 (577)
344 1ju2_A HydroxynitrIle lyase; f 97.0 0.00035 1.2E-08 67.9 3.3 33 57-90 25-57 (536)
345 2gmh_A Electron transfer flavo 96.9 0.0039 1.3E-07 61.2 10.6 100 206-306 36-218 (584)
346 3t37_A Probable dehydrogenase; 96.9 0.00047 1.6E-08 66.9 3.9 33 57-89 16-49 (526)
347 2gf3_A MSOX, monomeric sarcosi 96.9 0.0042 1.4E-07 57.4 10.3 33 206-238 4-36 (389)
348 3qvp_A Glucose oxidase; oxidor 96.8 0.00092 3.1E-08 65.4 4.7 34 57-90 18-52 (583)
349 2qcu_A Aerobic glycerol-3-phos 96.8 0.009 3.1E-07 57.4 11.5 33 206-238 4-36 (501)
350 2oln_A NIKD protein; flavoprot 96.8 0.0064 2.2E-07 56.4 10.2 33 206-238 5-37 (397)
351 1coy_A Cholesterol oxidase; ox 96.7 0.0015 5E-08 63.1 5.0 34 57-90 10-43 (507)
352 1n4w_A CHOD, cholesterol oxida 96.7 0.0014 4.8E-08 63.2 4.8 34 57-90 4-37 (504)
353 2r0c_A REBC; flavin adenine di 96.7 0.012 4.2E-07 57.2 11.6 35 206-240 27-61 (549)
354 1kf6_A Fumarate reductase flav 96.6 0.014 4.8E-07 57.4 11.8 50 253-304 146-196 (602)
355 3c4n_A Uncharacterized protein 96.6 0.0042 1.4E-07 58.0 7.6 32 206-237 37-70 (405)
356 2dkh_A 3-hydroxybenzoate hydro 96.6 0.0062 2.1E-07 60.4 9.1 34 206-239 33-67 (639)
357 2wdq_A Succinate dehydrogenase 96.6 0.016 5.4E-07 56.9 11.6 49 254-303 156-204 (588)
358 1gpe_A Protein (glucose oxidas 96.5 0.0027 9.1E-08 62.4 5.9 34 57-90 23-57 (587)
359 2e5v_A L-aspartate oxidase; ar 96.5 0.0079 2.7E-07 57.3 9.0 31 207-237 1-31 (472)
360 3fim_B ARYL-alcohol oxidase; A 96.5 0.0011 3.7E-08 64.7 2.7 33 58-90 2-35 (566)
361 1chu_A Protein (L-aspartate ox 96.4 0.013 4.5E-07 56.8 10.0 52 254-305 152-208 (540)
362 2jbv_A Choline oxidase; alcoho 96.4 0.0022 7.5E-08 62.4 4.5 34 57-90 12-46 (546)
363 3dfz_A SIRC, precorrin-2 dehyd 96.4 0.0021 7.3E-08 54.4 3.6 34 55-88 28-61 (223)
364 4b63_A L-ornithine N5 monooxyg 96.4 0.014 4.7E-07 56.1 9.8 56 253-308 157-217 (501)
365 2h88_A Succinate dehydrogenase 96.3 0.034 1.2E-06 54.8 12.4 50 253-304 167-216 (621)
366 3fwz_A Inner membrane protein 96.3 0.0053 1.8E-07 47.9 5.4 32 57-88 6-37 (140)
367 2rgh_A Alpha-glycerophosphate 96.3 0.029 1E-06 54.8 11.5 33 206-238 33-65 (571)
368 2aqj_A Tryptophan halogenase, 96.2 0.02 6.9E-07 55.5 9.9 34 205-238 5-41 (538)
369 3lk7_A UDP-N-acetylmuramoylala 96.0 0.0051 1.7E-07 58.3 4.7 81 57-178 8-88 (451)
370 3llv_A Exopolyphosphatase-rela 96.0 0.0076 2.6E-07 46.9 5.0 31 58-88 6-36 (141)
371 1pj5_A N,N-dimethylglycine oxi 96.0 0.021 7.3E-07 58.5 9.5 33 206-238 5-38 (830)
372 3kkj_A Amine oxidase, flavin-c 95.9 0.0057 1.9E-07 52.9 4.3 34 207-240 4-37 (336)
373 1vg0_A RAB proteins geranylger 95.9 0.0083 2.8E-07 59.0 5.8 42 57-102 7-48 (650)
374 1pn0_A Phenol 2-monooxygenase; 95.9 0.02 6.9E-07 57.0 8.7 35 206-240 9-48 (665)
375 1id1_A Putative potassium chan 95.8 0.011 3.8E-07 46.8 5.1 31 58-88 3-33 (153)
376 2g1u_A Hypothetical protein TM 95.7 0.011 3.7E-07 47.0 4.7 33 57-89 18-50 (155)
377 1lss_A TRK system potassium up 95.7 0.011 3.7E-07 45.7 4.5 30 59-88 5-34 (140)
378 2bs2_A Quinol-fumarate reducta 95.6 0.059 2E-06 53.5 10.5 50 254-305 171-220 (660)
379 2hmt_A YUAA protein; RCK, KTN, 95.4 0.017 5.8E-07 44.8 4.9 31 59-89 7-37 (144)
380 3eag_A UDP-N-acetylmuramate:L- 95.4 0.028 9.6E-07 50.7 6.8 132 58-233 4-139 (326)
381 4gut_A Lysine-specific histone 95.3 0.099 3.4E-06 52.9 11.1 34 205-238 336-369 (776)
382 3ic5_A Putative saccharopine d 95.2 0.018 6E-07 43.0 4.2 32 58-89 5-37 (118)
383 3eag_A UDP-N-acetylmuramate:L- 95.2 0.032 1.1E-06 50.3 6.5 79 205-311 4-84 (326)
384 1jnr_A Adenylylsulfate reducta 95.0 0.13 4.3E-06 51.0 10.8 50 255-304 166-217 (643)
385 3lk7_A UDP-N-acetylmuramoylala 94.9 0.035 1.2E-06 52.5 6.2 83 203-311 7-90 (451)
386 3c85_A Putative glutathione-re 94.7 0.036 1.2E-06 45.2 4.9 31 58-88 39-70 (183)
387 1f0y_A HCDH, L-3-hydroxyacyl-C 94.5 0.033 1.1E-06 49.6 4.6 31 59-89 16-46 (302)
388 3l4b_C TRKA K+ channel protien 94.5 0.036 1.2E-06 46.7 4.6 30 59-88 1-30 (218)
389 3ado_A Lambda-crystallin; L-gu 94.2 0.043 1.5E-06 49.1 4.6 31 58-88 6-36 (319)
390 4g65_A TRK system potassium up 93.9 0.064 2.2E-06 50.8 5.5 32 58-89 3-34 (461)
391 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.14 4.9E-06 43.1 6.9 80 203-310 29-108 (223)
392 3ihm_A Styrene monooxygenase A 93.8 0.047 1.6E-06 51.3 4.2 34 205-238 22-55 (430)
393 3nrn_A Uncharacterized protein 93.7 0.055 1.9E-06 50.4 4.7 35 206-240 1-35 (421)
394 1kyq_A Met8P, siroheme biosynt 93.7 0.04 1.4E-06 48.1 3.5 33 57-89 12-44 (274)
395 3gyx_A Adenylylsulfate reducta 93.7 0.073 2.5E-06 52.8 5.7 35 56-90 20-60 (662)
396 2x5o_A UDP-N-acetylmuramoylala 93.7 0.049 1.7E-06 51.3 4.3 32 58-89 5-36 (439)
397 4dio_A NAD(P) transhydrogenase 93.6 0.058 2E-06 49.8 4.5 33 57-89 189-221 (405)
398 3ka7_A Oxidoreductase; structu 93.6 0.06 2.1E-06 50.2 4.6 34 206-239 1-34 (425)
399 1pzg_A LDH, lactate dehydrogen 93.5 0.064 2.2E-06 48.4 4.6 31 58-88 9-40 (331)
400 3p2y_A Alanine dehydrogenase/p 93.2 0.067 2.3E-06 48.9 4.2 33 57-89 183-215 (381)
401 3i83_A 2-dehydropantoate 2-red 93.2 0.072 2.5E-06 47.8 4.3 30 59-88 3-32 (320)
402 3c4a_A Probable tryptophan hyd 93.1 0.071 2.4E-06 49.0 4.3 35 206-240 1-37 (381)
403 2iid_A L-amino-acid oxidase; f 93.1 0.085 2.9E-06 50.4 5.0 37 204-240 32-68 (498)
404 2dpo_A L-gulonate 3-dehydrogen 93.1 0.084 2.9E-06 47.3 4.6 32 58-89 6-37 (319)
405 1c0p_A D-amino acid oxidase; a 93.1 0.11 3.9E-06 47.2 5.6 33 205-237 6-38 (363)
406 2g1u_A Hypothetical protein TM 93.1 0.12 4.1E-06 40.8 5.1 37 203-239 17-53 (155)
407 4ffl_A PYLC; amino acid, biosy 93.0 0.085 2.9E-06 48.2 4.6 32 59-90 2-33 (363)
408 3ghy_A Ketopantoate reductase 92.9 0.097 3.3E-06 47.3 4.8 31 58-88 3-33 (335)
409 3nks_A Protoporphyrinogen oxid 92.9 0.083 2.8E-06 50.1 4.6 35 206-240 3-39 (477)
410 4e12_A Diketoreductase; oxidor 92.9 0.095 3.2E-06 46.1 4.5 31 59-89 5-35 (283)
411 3hn2_A 2-dehydropantoate 2-red 92.8 0.083 2.8E-06 47.2 4.2 30 59-88 3-32 (312)
412 1jw9_B Molybdopterin biosynthe 92.7 0.09 3.1E-06 45.3 4.1 33 57-89 30-63 (249)
413 2b9w_A Putative aminooxidase; 92.7 0.098 3.4E-06 48.7 4.7 36 205-240 6-42 (424)
414 3g17_A Similar to 2-dehydropan 92.7 0.1 3.6E-06 46.1 4.6 31 59-89 3-33 (294)
415 2a9f_A Putative malic enzyme ( 92.7 0.098 3.4E-06 47.8 4.4 33 57-89 187-220 (398)
416 2e1m_A L-glutamate oxidase; L- 92.6 0.13 4.3E-06 47.3 5.2 37 204-240 43-80 (376)
417 1lld_A L-lactate dehydrogenase 92.6 0.098 3.4E-06 46.8 4.4 31 58-88 7-39 (319)
418 3k7m_X 6-hydroxy-L-nicotine ox 92.6 0.087 3E-06 49.2 4.1 34 207-240 3-36 (431)
419 4gde_A UDP-galactopyranose mut 92.6 0.091 3.1E-06 50.3 4.3 35 206-240 11-46 (513)
420 2jae_A L-amino acid oxidase; o 92.5 0.13 4.4E-06 49.0 5.3 37 204-240 10-46 (489)
421 3vtf_A UDP-glucose 6-dehydroge 92.5 0.12 3.9E-06 48.5 4.7 32 57-88 20-51 (444)
422 2ivd_A PPO, PPOX, protoporphyr 92.4 0.098 3.4E-06 49.6 4.4 39 202-240 13-51 (478)
423 1kyq_A Met8P, siroheme biosynt 92.4 0.14 4.7E-06 44.7 4.9 36 204-239 12-47 (274)
424 3g5s_A Methylenetetrahydrofola 92.4 0.11 3.6E-06 47.9 4.2 33 206-238 2-34 (443)
425 1x13_A NAD(P) transhydrogenase 92.4 0.11 3.8E-06 48.2 4.5 32 58-89 172-203 (401)
426 2bcg_G Secretory pathway GDP d 92.3 0.12 4.2E-06 48.8 4.8 37 205-241 11-47 (453)
427 2y0c_A BCEC, UDP-glucose dehyd 92.3 0.11 3.7E-06 49.4 4.4 32 58-89 8-39 (478)
428 3tl2_A Malate dehydrogenase; c 92.1 0.14 4.9E-06 45.7 4.7 32 57-88 7-39 (315)
429 2ew2_A 2-dehydropantoate 2-red 92.0 0.12 4.2E-06 45.8 4.3 31 59-89 4-34 (316)
430 3gg2_A Sugar dehydrogenase, UD 92.0 0.12 4.2E-06 48.6 4.4 31 59-89 3-33 (450)
431 1s3e_A Amine oxidase [flavin-c 92.0 0.12 4.1E-06 49.7 4.4 36 205-240 4-39 (520)
432 3l9w_A Glutathione-regulated p 92.0 0.16 5.3E-06 47.3 5.0 32 58-89 4-35 (413)
433 1l7d_A Nicotinamide nucleotide 91.9 0.13 4.6E-06 47.4 4.5 33 57-89 171-203 (384)
434 1ks9_A KPA reductase;, 2-dehyd 91.9 0.15 5.3E-06 44.6 4.8 30 60-89 2-31 (291)
435 1y6j_A L-lactate dehydrogenase 91.9 0.14 4.9E-06 45.8 4.5 31 58-88 7-39 (318)
436 2bi7_A UDP-galactopyranose mut 91.9 0.16 5.6E-06 46.7 5.0 36 206-241 4-39 (384)
437 3d0o_A L-LDH 1, L-lactate dehy 91.9 0.13 4.6E-06 46.0 4.3 32 57-88 5-38 (317)
438 2v6b_A L-LDH, L-lactate dehydr 91.9 0.14 4.7E-06 45.6 4.3 29 60-88 2-32 (304)
439 3k96_A Glycerol-3-phosphate de 91.7 0.16 5.3E-06 46.3 4.6 33 57-89 28-60 (356)
440 1id1_A Putative potassium chan 91.7 0.21 7.2E-06 39.2 4.9 34 205-238 3-36 (153)
441 3e8x_A Putative NAD-dependent 91.7 0.17 5.7E-06 42.9 4.6 33 57-89 20-53 (236)
442 3i6d_A Protoporphyrinogen oxid 91.7 0.078 2.7E-06 50.0 2.7 35 206-240 6-46 (470)
443 3fwz_A Inner membrane protein 91.7 0.2 6.7E-06 38.8 4.6 35 204-238 6-40 (140)
444 1pjc_A Protein (L-alanine dehy 91.7 0.16 5.4E-06 46.4 4.6 32 58-89 167-198 (361)
445 3g3e_A D-amino-acid oxidase; F 91.6 0.13 4.3E-06 46.7 3.9 32 207-238 2-39 (351)
446 4hv4_A UDP-N-acetylmuramate--L 91.5 0.13 4.6E-06 49.1 4.2 78 204-311 21-99 (494)
447 2hjr_A Malate dehydrogenase; m 91.5 0.16 5.6E-06 45.6 4.5 30 59-88 15-45 (328)
448 1vl6_A Malate oxidoreductase; 91.5 0.16 5.5E-06 46.3 4.4 33 57-89 191-224 (388)
449 2eez_A Alanine dehydrogenase; 91.4 0.17 6E-06 46.3 4.6 32 57-88 165-196 (369)
450 1bg6_A N-(1-D-carboxylethyl)-L 91.3 0.16 5.6E-06 46.1 4.4 31 59-89 5-35 (359)
451 3hwr_A 2-dehydropantoate 2-red 91.3 0.16 5.6E-06 45.4 4.3 31 57-87 18-48 (318)
452 3gpi_A NAD-dependent epimerase 91.3 0.22 7.6E-06 43.5 5.1 33 58-90 3-35 (286)
453 3dje_A Fructosyl amine: oxygen 91.3 0.22 7.4E-06 46.6 5.3 35 205-239 6-41 (438)
454 2raf_A Putative dinucleotide-b 91.3 0.19 6.3E-06 42.0 4.3 33 57-89 18-50 (209)
455 1sez_A Protoporphyrinogen oxid 91.3 0.18 6.3E-06 48.1 4.9 36 205-240 13-48 (504)
456 3fpz_A Thiazole biosynthetic e 91.3 0.15 5.1E-06 45.7 4.0 36 205-240 65-102 (326)
457 1rsg_A FMS1 protein; FAD bindi 91.3 0.14 4.8E-06 49.2 4.0 36 205-240 8-44 (516)
458 1lss_A TRK system potassium up 91.2 0.2 7E-06 38.2 4.3 34 205-238 4-37 (140)
459 3pqe_A L-LDH, L-lactate dehydr 91.2 0.18 6.3E-06 45.2 4.4 31 58-88 5-37 (326)
460 2vns_A Metalloreductase steap3 91.0 0.26 8.8E-06 41.3 5.0 32 58-89 28-59 (215)
461 3llv_A Exopolyphosphatase-rela 91.0 0.2 6.9E-06 38.6 4.0 34 205-238 6-39 (141)
462 3oj0_A Glutr, glutamyl-tRNA re 91.0 0.08 2.7E-06 41.2 1.6 31 58-88 21-51 (144)
463 2qyt_A 2-dehydropantoate 2-red 91.0 0.15 5.2E-06 45.4 3.7 31 58-88 8-44 (317)
464 2vhw_A Alanine dehydrogenase; 90.9 0.21 7.1E-06 45.9 4.6 32 57-88 167-198 (377)
465 3ego_A Probable 2-dehydropanto 90.9 0.19 6.5E-06 44.7 4.2 30 59-89 3-32 (307)
466 2ewd_A Lactate dehydrogenase,; 90.9 0.19 6.5E-06 44.9 4.2 30 59-88 5-35 (317)
467 2x5o_A UDP-N-acetylmuramoylala 90.9 0.28 9.6E-06 46.1 5.6 52 204-261 4-55 (439)
468 2yg5_A Putrescine oxidase; oxi 90.8 0.18 6.1E-06 47.4 4.2 35 206-240 6-40 (453)
469 1v0j_A UDP-galactopyranose mut 90.8 0.22 7.6E-06 46.1 4.7 37 205-241 7-44 (399)
470 3hdq_A UDP-galactopyranose mut 90.7 0.19 6.6E-06 46.4 4.2 37 205-241 29-65 (397)
471 3doj_A AT3G25530, dehydrogenas 90.7 0.23 7.8E-06 44.3 4.6 32 58-89 21-52 (310)
472 1t2d_A LDH-P, L-lactate dehydr 90.7 0.22 7.7E-06 44.6 4.6 30 59-88 5-35 (322)
473 1ur5_A Malate dehydrogenase; o 90.7 0.21 7.3E-06 44.5 4.4 30 59-88 3-33 (309)
474 3phh_A Shikimate dehydrogenase 90.7 0.27 9.1E-06 42.8 4.8 32 58-89 118-149 (269)
475 3hn7_A UDP-N-acetylmuramate-L- 90.6 0.37 1.3E-05 46.3 6.3 81 203-311 17-98 (524)
476 3gvi_A Malate dehydrogenase; N 90.6 0.23 7.8E-06 44.5 4.5 31 58-88 7-38 (324)
477 1z82_A Glycerol-3-phosphate de 90.5 0.22 7.7E-06 44.8 4.4 33 57-89 13-45 (335)
478 3orq_A N5-carboxyaminoimidazol 90.5 0.3 1E-05 44.8 5.4 33 57-89 11-43 (377)
479 3ic5_A Putative saccharopine d 90.5 0.21 7.2E-06 36.8 3.6 34 205-238 5-39 (118)
480 1i8t_A UDP-galactopyranose mut 90.5 0.22 7.5E-06 45.6 4.4 34 207-240 3-36 (367)
481 3lov_A Protoporphyrinogen oxid 90.5 0.2 7E-06 47.3 4.3 35 206-240 5-41 (475)
482 2e4g_A Tryptophan halogenase; 90.4 0.27 9.1E-06 47.7 5.1 34 205-238 25-61 (550)
483 3pid_A UDP-glucose 6-dehydroge 90.4 0.2 6.9E-06 46.7 4.0 32 57-89 35-66 (432)
484 3ius_A Uncharacterized conserv 90.4 0.23 7.9E-06 43.3 4.3 31 59-89 6-36 (286)
485 1mv8_A GMD, GDP-mannose 6-dehy 90.4 0.18 6.3E-06 47.3 3.8 30 60-89 2-31 (436)
486 4hy3_A Phosphoglycerate oxidor 90.3 0.91 3.1E-05 41.3 8.2 37 202-238 173-209 (365)
487 4a7p_A UDP-glucose dehydrogena 90.2 0.28 9.5E-06 46.1 4.9 32 58-89 8-39 (446)
488 3g0o_A 3-hydroxyisobutyrate de 90.1 0.26 8.9E-06 43.7 4.4 32 58-89 7-38 (303)
489 2vvm_A Monoamine oxidase N; FA 90.0 0.51 1.8E-05 44.8 6.7 54 120-173 255-311 (495)
490 3g79_A NDP-N-acetyl-D-galactos 90.0 0.22 7.5E-06 47.2 4.0 32 58-89 18-51 (478)
491 3p7m_A Malate dehydrogenase; p 90.0 0.28 9.7E-06 43.9 4.6 31 58-88 5-36 (321)
492 4huj_A Uncharacterized protein 90.0 0.22 7.5E-06 41.9 3.6 31 58-88 23-54 (220)
493 3qsg_A NAD-binding phosphogluc 90.0 0.24 8.2E-06 44.2 4.1 33 57-89 23-56 (312)
494 1ldn_A L-lactate dehydrogenase 90.0 0.28 9.5E-06 43.9 4.5 31 58-88 6-38 (316)
495 1zej_A HBD-9, 3-hydroxyacyl-CO 89.9 0.26 9E-06 43.5 4.2 32 57-89 11-42 (293)
496 1guz_A Malate dehydrogenase; o 89.9 0.27 9.2E-06 43.8 4.3 29 60-88 2-32 (310)
497 2weu_A Tryptophan 5-halogenase 89.9 0.2 6.8E-06 48.0 3.7 33 206-238 3-38 (511)
498 1nyt_A Shikimate 5-dehydrogena 89.9 0.28 9.7E-06 42.7 4.4 32 58-89 119-150 (271)
499 1pjq_A CYSG, siroheme synthase 89.8 0.27 9.1E-06 46.5 4.5 33 57-89 11-43 (457)
500 3qha_A Putative oxidoreductase 89.8 0.25 8.7E-06 43.6 4.1 32 58-89 15-46 (296)
No 1
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=3.2e-46 Score=345.59 Aligned_cols=322 Identities=84% Similarity=1.323 Sum_probs=264.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+||+|||||++|+++|+.|++.|++|+|||++.......|+.+.......+++.++..+...++.+++.+.+.+.+++
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 86 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTT 86 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCE
Confidence 45899999999999999999999999999999643335567787776655566777776677889999999999999999
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCcc----ccCCCcceeeeccCCCCCCCCCcEEEEc
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDA----FWNRGISACAVCDGAAPIFRDKPLAVIG 212 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~v~VvG 212 (382)
++.++|..++.+++.+.+.+++.+++||+||+|+|.+|..|++||.+. ++.+.++.+...+.......+++++|||
T Consensus 87 ~~~~~v~~i~~~~~~~~v~~~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG 166 (333)
T 1vdc_A 87 IFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIG 166 (333)
T ss_dssp EECCCCCEEECSSSSEEEECSSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEEC
T ss_pred EEEeEEEEEEEcCCEEEEEECCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEEC
Confidence 998889999988888888776778999999999999999999998765 5445555555545442125689999999
Q ss_pred CCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEE
Q 016820 213 GGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDL 292 (382)
Q Consensus 213 ~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~ 292 (382)
+|.+|+|+|..|.+.+.+|+++++.+.+.....+.++++++.||++++++++.++..++++..+..+.+.+..+++..++
T Consensus 167 ~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i 246 (333)
T 1vdc_A 167 GGDSAMEEANFLTKYGSKVYIIHRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDL 246 (333)
T ss_dssp CSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEE
T ss_pred CChHHHHHHHHHHhcCCeEEEEecCCcCCccHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEE
Confidence 99999999999999999999999999887767766677788999999999999999876421255577765334555789
Q ss_pred ecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHcc
Q 016820 293 KVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIG 372 (382)
Q Consensus 293 ~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~~ 372 (382)
++|.+++++|++|+..++..++.++++|++.||+++++|+.|+|||+|||+..+++++..|+.+|+.+|.+|.++|.+++
T Consensus 247 ~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 326 (333)
T 1vdc_A 247 KVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEIG 326 (333)
T ss_dssp ECSEEEECSCEEESCGGGTTSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ecCEEEEEeCCccchHHhhccccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHHHHHhcc
Confidence 99999999999999988876777888999999997689999999999999986568899999999999999999999988
Q ss_pred Cccccc
Q 016820 373 SQEDKS 378 (382)
Q Consensus 373 ~~~~~~ 378 (382)
+++.+.
T Consensus 327 ~~~~~~ 332 (333)
T 1vdc_A 327 SQEGKS 332 (333)
T ss_dssp ------
T ss_pred ccccCC
Confidence 887765
No 2
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=3.9e-46 Score=345.47 Aligned_cols=314 Identities=65% Similarity=1.075 Sum_probs=272.0
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
...+||+|||||++|+++|..|++.|++|+|||+........||.+.......++|+++......++.+++.+.+.++++
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 99 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGT 99 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999999999999999975444667899988877777788888878889999999999999999
Q ss_pred EEEEeeEEEEEecCCcEEEEE----CCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEE
Q 016820 136 QIFTETVSKVDFKSRPFKVFT----DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVI 211 (382)
Q Consensus 136 ~~~~~~v~~i~~~~~~~~v~~----~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv 211 (382)
+++.++|.+++.+++.+.+.+ ++..+.||+||+|+|.+|+.|.+||.+.++...++.+...+.......+++++||
T Consensus 100 ~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vv 179 (338)
T 3itj_A 100 EIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVI 179 (338)
T ss_dssp EEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEE
T ss_pred EEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEE
Confidence 999999999999988888876 4466999999999999999999999877766667666655555435568999999
Q ss_pred cCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEE
Q 016820 212 GGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSD 291 (382)
Q Consensus 212 G~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~ 291 (382)
|+|.+|+|+|..|.+.+.+|+++++.+.+.....+.+++.+..||++++++.+.+++.++++ +..+++.+..++++.+
T Consensus 180 G~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~--~~~v~~~~~~~g~~~~ 257 (338)
T 3itj_A 180 GGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDGKL--LNALRIKNTKKNEETD 257 (338)
T ss_dssp CSSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHHCTTEEEECSEEEEEEEESSSS--EEEEEEEETTTTEEEE
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEEcCCccCCCHHHHHHHHhcCCeEEeecceeEEEEcccCc--EEEEEEEECCCCceEE
Confidence 99999999999999999999999999988777777666556679999999999999987753 5567777655566678
Q ss_pred EecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHc
Q 016820 292 LKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 371 (382)
Q Consensus 292 ~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~ 371 (382)
+++|.|++++|++|+..++..++.++++|++.+++.+++|+.|||||+|||+...++.+..|+.+|+.||.+|.++|.++
T Consensus 258 i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 337 (338)
T 3itj_A 258 LPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL 337 (338)
T ss_dssp EECSEEEECSCEEECCGGGBTTBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeCEEEEEeCCCCChhHhhCceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHHHHhcC
Confidence 99999999999999999887778888999999755589999999999999998667899999999999999999999864
No 3
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=6.7e-46 Score=340.58 Aligned_cols=309 Identities=60% Similarity=1.022 Sum_probs=264.8
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.+||+||||||||++||..|+++|++|+|||+....+..++|.+......+++|+++..+...++.+++.+.+.+.++.+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~ 83 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTI 83 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEE
Confidence 48999999999999999999999999999997544445667777777777888999988999999999999999999999
Q ss_pred EEeeEEEEEecCCcEEEEE-CCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCch
Q 016820 138 FTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDS 216 (382)
Q Consensus 138 ~~~~v~~i~~~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~ 216 (382)
...++..+....+.+.+.+ ++.++.||+||+|||++|+.|++||.+..+...+..+...........+++++|||+|.+
T Consensus 84 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~i 163 (314)
T 4a5l_A 84 ITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDA 163 (314)
T ss_dssp ECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHH
T ss_pred EEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChH
Confidence 8888888877776665555 446799999999999999999999988766666777766666654567899999999999
Q ss_pred HHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCe
Q 016820 217 AMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSG 296 (382)
Q Consensus 217 a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~ 296 (382)
|+|+|..|.++|.+||+++|.+.+........+.....+++.+....+.++...... ...+.+.....+++..+++|.
T Consensus 164 g~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~i~~d~ 241 (314)
T 4a5l_A 164 AMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDL--LNGAKIHNLVSGEYKVVPVAG 241 (314)
T ss_dssp HHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEESSSS--EEEEEEEETTTCCEEEEECSE
T ss_pred HHHHHHHHHHhCCeeeeecccccccccchhhhhhhcccceeeEeeeeeEEEEeeeec--cceeEEeecccccceeecccc
Confidence 999999999999999999998888776666667778889999999999998876543 455777766667778999999
Q ss_pred EEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHH
Q 016820 297 LFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQE 370 (382)
Q Consensus 297 vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~ 370 (382)
+++++|.+|++.++...+..+++|++ +|+ .++|+.|||||+|||++.+.+++..|+.+|+.||.+|.+||+.
T Consensus 242 vi~a~G~~pn~~~l~~~~~~~~~G~i-v~~-~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 242 LFYAIGHSPNSKFLGGQVKTADDGYI-LTE-GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp EEECSCEEESCGGGTTSSCBCTTSCB-CCB-TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEecccccChhHhcccceEcCCeeE-eCC-CCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999877788888887 777 6899999999999999876778999999999999999999963
No 4
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=7.2e-44 Score=328.76 Aligned_cols=308 Identities=44% Similarity=0.764 Sum_probs=253.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+||+|||||++|+++|..|++.|++|+|||+ . ..||.+........+++++..+...++.+++.+.+++++++
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~----~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 81 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEK----G-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAK 81 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES----S-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeC----C-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 358999999999999999999999999999995 3 57888876666666777766677889999999999999999
Q ss_pred EEEeeEEEEEec--CCc-EEEEE-CCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEc
Q 016820 137 IFTETVSKVDFK--SRP-FKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIG 212 (382)
Q Consensus 137 ~~~~~v~~i~~~--~~~-~~v~~-~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG 212 (382)
++.++|.+++.+ ++. +.+.+ ++..+.||+||+|+|.+|+.|++||.+.+....++.+...+.. ...+++++|||
T Consensus 82 ~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~--~~~~~~v~VvG 159 (325)
T 2q7v_A 82 VEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGF--FYKGKKVVVIG 159 (325)
T ss_dssp EEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG--GGTTCEEEEEC
T ss_pred EEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHH--HcCCCEEEEEC
Confidence 988889999887 443 55543 5567999999999999999999999876555555554444443 45679999999
Q ss_pred CCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEE
Q 016820 213 GGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDL 292 (382)
Q Consensus 213 ~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~ 292 (382)
+|.+|+|+|..|.+.+.+|+++++.+.+.....+.++++++.||++++++++.++..++. +.++.+.+..+++..++
T Consensus 160 ~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~---v~~v~~~~~~~g~~~~i 236 (325)
T 2q7v_A 160 GGDAAVEEGMFLTKFADEVTVIHRRDTLRANKVAQARAFANPKMKFIWDTAVEEIQGADS---VSGVKLRNLKTGEVSEL 236 (325)
T ss_dssp CSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEESSS---EEEEEEEETTTCCEEEE
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCcCCcchHHHHHHHhcCCceEecCCceEEEccCCc---EEEEEEEECCCCcEEEE
Confidence 999999999999999999999999988876666666666678999999999999998642 44577764334555689
Q ss_pred ecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHcc
Q 016820 293 KVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIG 372 (382)
Q Consensus 293 ~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~~ 372 (382)
++|.+++++|++|+.+++...+.++++|++.||+ +++|++|+||++|||+...++.+..|+.||+.+|.+|..+|.+++
T Consensus 237 ~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 315 (325)
T 2q7v_A 237 ATDGVFIFIGHVPNTAFVKDTVSLRDDGYVDVRD-EIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQLAALE 315 (325)
T ss_dssp ECSEEEECSCEEESCGGGTTTSCBCTTSCBCCBT-TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EcCEEEEccCCCCChHHHhhhcccCCCccEecCC-CCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998887336677899999999 688999999999999976568999999999999999999999876
Q ss_pred Ccc
Q 016820 373 SQE 375 (382)
Q Consensus 373 ~~~ 375 (382)
+..
T Consensus 316 ~~~ 318 (325)
T 2q7v_A 316 VEG 318 (325)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 5
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=2e-44 Score=330.71 Aligned_cols=302 Identities=39% Similarity=0.674 Sum_probs=261.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEE-EecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPIL-FEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~l-ie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
.++||+|||||++|+++|..|++.|++|+| +|+ ..+||.+........+|+++......++..++.+.++++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-----~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 77 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-----GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGL 77 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-----SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-----CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCc
Confidence 357999999999999999999999999999 994 35688888777777788887778899999999999999999
Q ss_pred EEEEeeEEEEEecC--CcEE--EEECCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEE
Q 016820 136 QIFTETVSKVDFKS--RPFK--VFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVI 211 (382)
Q Consensus 136 ~~~~~~v~~i~~~~--~~~~--v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv 211 (382)
+++.++|..+ .++ +.+. +.+++ ++.||+||+|||..|+.|.+||.+.+....++.+.+.... ...+++++|+
T Consensus 78 ~~~~~~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~v~vi 153 (315)
T 3r9u_A 78 KHEMVGVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGF--FYKNKEVAVL 153 (315)
T ss_dssp EEECCCEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGG--GGTTSEEEEE
T ss_pred EEEEEEEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeeccccc--ccCcCEEEEE
Confidence 9999999999 666 6787 55555 8999999999999999999999887766666666665555 5568999999
Q ss_pred cCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEE
Q 016820 212 GGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSD 291 (382)
Q Consensus 212 G~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~ 291 (382)
|+|.+++|+|..|.+.+.+|+++++.+.+.....+.++++++.||++++++.+.++..++++ +.++++. ..+++..+
T Consensus 154 G~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~--~~~v~~~-~~~g~~~~ 230 (315)
T 3r9u_A 154 GGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMG--VAGVKVK-LKDGSIRD 230 (315)
T ss_dssp CCBHHHHHHHHHHHTTSSEEEEECSSSSCBSCHHHHHHHHHCTTEEEECSCEEEEEEEETTE--EEEEEEE-CTTSCEEE
T ss_pred CCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCCHHHHHHHHhcCCeEEEeCcEEEEEEcCCCc--EEEEEEE-cCCCCeEE
Confidence 99999999999999999999999999988776667677778899999999999999887642 5557776 22355568
Q ss_pred EecCeEEEeeCCCCChhhhcc-----cccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 292 LKVSGLFFAIGHEPATKFVDG-----QLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 292 ~~~D~vi~~~G~~p~~~~~~~-----~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
+++|.+++++|++|+..++.. ++.++++|++.||+ +++|+.|||||+|||++..++.+..|+.+|+.+|.+|.+
T Consensus 231 ~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~-~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 231 LNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDL-KMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp ECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCT-TCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred eecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCC-CcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHH
Confidence 999999999999999998874 38888899999999 889999999999999875678999999999999999999
Q ss_pred HHHHc
Q 016820 367 YLQEI 371 (382)
Q Consensus 367 ~l~~~ 371 (382)
+|.++
T Consensus 310 ~l~~~ 314 (315)
T 3r9u_A 310 YIESL 314 (315)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99875
No 6
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.7e-44 Score=328.17 Aligned_cols=305 Identities=43% Similarity=0.695 Sum_probs=249.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
.++||+||||||||++||.+|+++|++|+|||+. .+||++....+.+++|.++ .....++.........+.+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-----~~gG~~~~~~~i~~~p~~~-~~~~~~~~~~~~~~~~~~~~~ 78 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-----IPGGQMANTEEVENFPGFE-MITGPDLSTKMFEHAKKFGAV 78 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-----CTTGGGGGCSCBCCSTTCS-SBCHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-----CCCCeeecccccCCcCCcc-ccchHHHHHHHHHHHhhcccc
Confidence 5699999999999999999999999999999952 6788888777777777764 456788888888888888888
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCch
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDS 216 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~ 216 (382)
+..+.............+..++.++.||+||+|||++|+.|++||.+.+..+.++.+...+.. ...+++++|||+|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~--~~~~k~vvViGgG~i 156 (312)
T 4gcm_A 79 YQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--FFKNKRLFVIGGGDS 156 (312)
T ss_dssp EEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG--GGTTCEEEEECCSHH
T ss_pred ccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCcc--ccCCCEEEEECCCHH
Confidence 877744344334444556667788999999999999999999999988777777776666655 567899999999999
Q ss_pred HHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCe
Q 016820 217 AMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSG 296 (382)
Q Consensus 217 a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~ 296 (382)
|+|+|..|.++|.+||++++.+.+........+.++..++.......+..+...+.. ...........++...+++|.
T Consensus 157 g~E~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~ 234 (312)
T 4gcm_A 157 AVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGK--VGSVTLTSTKDGSEETHEADG 234 (312)
T ss_dssp HHHHHHHHTTTCSEEEEECSSSSCCSCHHHHHHHHHCTTEEEECSEEEEEEEEETTE--EEEEEEEETTTCCEEEEECSE
T ss_pred HHHHHHHHHhcCCEEEEEecccccCcchhHHHHHHHhcCcceeeecceeeeeccccc--cccceeeeecCCceeEEeeee
Confidence 999999999999999999999988766665566778889988888877777766542 222333333445668899999
Q ss_pred EEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHcc
Q 016820 297 LFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIG 372 (382)
Q Consensus 297 vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~~ 372 (382)
+++++|.+|+..++......+++|+|.||+ +++|++|||||+|||++..+++++.|+.+|+.||.+|.++|....
T Consensus 235 v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~-~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~l~ 309 (312)
T 4gcm_A 235 VFIYIGMKPLTAPFKDLGITNDVGYIVTKD-DMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLN 309 (312)
T ss_dssp EEECSCEEESCGGGGGGTCBCTTSCBCCCT-TSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCCcCchhHHhcceecCCCeEeeCC-CCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999998877333356789999998 889999999999999976678899999999999999999998643
No 7
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-44 Score=335.83 Aligned_cols=307 Identities=51% Similarity=0.850 Sum_probs=256.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+||+|||||++|+++|..|++.|++|+|||+. ..||.+........+|.++..+...++.+++.+.+.+++++
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-----~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 87 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-----SFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGAD 87 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-----SCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-----CCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 4589999999999999999999999999999942 56777766555566777776678889999999999999999
Q ss_pred EEEeeEEEEEecCCcEEE-EEC-CeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCC
Q 016820 137 IFTETVSKVDFKSRPFKV-FTD-SKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGG 214 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v-~~~-~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G 214 (382)
++.+++..++. .+.+.+ .++ +.++.||+||+|+|.+|+.|++||.+.+....++.+...+.. ...+++++|||+|
T Consensus 88 ~~~~~v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~--~~~~~~v~ViG~G 164 (335)
T 2a87_A 88 LRMEDVESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGF--FFRDQDIAVIGGG 164 (335)
T ss_dssp EECCCEEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGG--GGTTCEEEEECSS
T ss_pred EEEeeEEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchh--hcCCCEEEEECCC
Confidence 99889989987 555666 554 457999999999999999999998766555555555444444 3568999999999
Q ss_pred chHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEec
Q 016820 215 DSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKV 294 (382)
Q Consensus 215 ~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~ 294 (382)
.+|+|+|..|.+.+.+|+++++.+.+.....+.++++++.||++++++++.+++.+++ +..+.+.+..+++..++++
T Consensus 165 ~~g~e~a~~l~~~g~~V~l~~~~~~~~~~~~~~~~~~~~~gV~v~~~~~v~~i~~~~~---~~~v~~~~~~~g~~~~i~~ 241 (335)
T 2a87_A 165 DSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGDTT---VTGLRVRDTNTGAETTLPV 241 (335)
T ss_dssp HHHHHHHHHHTTTCSEEEEECSSSSCSSCTTHHHHHHHCTTEEEECSEEEEEEECSSS---CCEEEEEEETTSCCEEECC
T ss_pred HHHHHHHHHHHHhCCeEEEEEcCCcCCccHHHHHHHhccCCcEEEeCceeEEEecCCc---EeEEEEEEcCCCceEEeec
Confidence 9999999999999999999999988876666655667789999999999999987753 3447776433344468999
Q ss_pred CeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHccCc
Q 016820 295 SGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIGSQ 374 (382)
Q Consensus 295 D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~~~~ 374 (382)
|.|++++|++|++.++..++.++++|++.||+.+++|+.|+|||+|||+...++++..|+.+|+.+|.+|.++|.+++..
T Consensus 242 D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~~~~~~ 321 (335)
T 2a87_A 242 TGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAEHAAT 321 (335)
T ss_dssp SCEEECSCEEECCTTTBTTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEccCCccChhHhhcccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhhcCcCc
Confidence 99999999999998887677788899999999778999999999999998666889999999999999999999987654
No 8
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=7.5e-44 Score=327.88 Aligned_cols=304 Identities=38% Similarity=0.657 Sum_probs=256.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+||+|||||++|+++|..|++.|++|+|||+ . .||.+........++.++. ....++.+++.+.+.+++++
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~----~--~gg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~ 86 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGE----T--PGGQLTEAGIVDDYLGLIE-IQASDMIKVFNKHIEKYEVP 86 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES----S--TTGGGGGCCEECCSTTSTT-EEHHHHHHHHHHHHHTTTCC
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEec----c--CCCeecccccccccCCCCC-CCHHHHHHHHHHHHHHcCCE
Confidence 358999999999999999999999999999995 3 7888776655556666643 56789999999999999999
Q ss_pred EEEeeEEEEEecCCcEEEEECC-eEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCc
Q 016820 137 IFTETVSKVDFKSRPFKVFTDS-KSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGD 215 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~-~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~ 215 (382)
++..+|.+++.+++.+.+.+++ .++.||+||+|+|..|+.|+++|.+.+....++.+...+.. ...+++++|+|+|.
T Consensus 87 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~--~~~~~~v~vvG~G~ 164 (323)
T 3f8d_A 87 VLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAP--LFKNRVVAVIGGGD 164 (323)
T ss_dssp EEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGG--GGTTCEEEEECCSH
T ss_pred EEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHh--HcCCCEEEEECCCH
Confidence 9888899999988888888766 67999999999999999999999887666666555554444 55689999999999
Q ss_pred hHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecC
Q 016820 216 SAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVS 295 (382)
Q Consensus 216 ~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D 295 (382)
+++|+|..|.+.+.+|+++++.+.+.....+.++++++.||+++.++++.++..++. +..+++.+..+++...+++|
T Consensus 165 ~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~---~~~v~~~~~~~g~~~~~~~D 241 (323)
T 3f8d_A 165 SALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKV---VKQVVVENLKTGEIKELNVN 241 (323)
T ss_dssp HHHHHHHHHHHHSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEESSS---EEEEEEEETTTCCEEEEECS
T ss_pred HHHHHHHHHHHhCCeEEEEEeCCCCCcCHHHHHHHHhCCCcEEEeCCEEEEEeccCc---eeEEEEEECCCCceEEEEcC
Confidence 999999999999999999999998877666666777777999999999999998753 45577776444555689999
Q ss_pred eEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc--hhhHHHHHHhhHHHHHHHHHHHHHHcc
Q 016820 296 GLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK--KYRQAVTAAGTGCMAALEAEHYLQEIG 372 (382)
Q Consensus 296 ~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~--~~~~~~~a~~~g~~aa~~i~~~l~~~~ 372 (382)
.+++++|++|+.+++. .++.++++|++.||+ +++|+.||||++|||+.. .++.+..|+.+|+.+|.+|.++|.+++
T Consensus 242 ~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 320 (323)
T 3f8d_A 242 GVFIEIGFDPPTDFAKSNGIETDTNGYIKVDE-WMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKK 320 (323)
T ss_dssp EEEECCCEECCHHHHHHTTCCBCTTSSBCCCT-TCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEECCCCChhHHhhcCeeecCCCcEecCC-CceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHHhh
Confidence 9999999999988776 567888999999998 888999999999999975 378999999999999999999999876
Q ss_pred C
Q 016820 373 S 373 (382)
Q Consensus 373 ~ 373 (382)
.
T Consensus 321 ~ 321 (323)
T 3f8d_A 321 G 321 (323)
T ss_dssp -
T ss_pred c
Confidence 4
No 9
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=1.2e-43 Score=325.18 Aligned_cols=302 Identities=37% Similarity=0.637 Sum_probs=251.1
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCC-CeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAEL-KPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
+||+|||||++|+++|..|++.|+ +|+|||+. ..||.+........+++++......++.+++.+.+.++++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-----~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~ 76 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-----MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKH 76 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-----STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEE
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-----CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 689999999999999999999999 99999952 567777666555667777667788999999999999999999
Q ss_pred EEeeEEEEEecCCcEEEEE-CCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCch
Q 016820 138 FTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDS 216 (382)
Q Consensus 138 ~~~~v~~i~~~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~ 216 (382)
+..+|..++.+++.+.+.+ ++.++.||+||+|+|++|+.|+++|.+.+....++.+...+.. ...+++++|||+|.+
T Consensus 77 ~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~v~VvG~G~~ 154 (311)
T 2q0l_A 77 EMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGF--FYKNKEVAVLGGGDT 154 (311)
T ss_dssp ECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGG--GGTTSEEEEECCSHH
T ss_pred EEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCChh--hcCCCEEEEECCCHH
Confidence 8888999998888777755 4457999999999999999999998766544445444444443 446799999999999
Q ss_pred HHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCe
Q 016820 217 AMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSG 296 (382)
Q Consensus 217 a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~ 296 (382)
|+|+|..|.+.+.+|+++++.+.+.....+.+++.++.||++++++.+.++..++++ +..+.+....+++..++++|.
T Consensus 155 g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~--v~~v~~~~~~~g~~~~i~~D~ 232 (311)
T 2q0l_A 155 AVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDASG--VSSLSIKNTATNEKRELVVPG 232 (311)
T ss_dssp HHHHHHHHHTTSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEETTEEEEEEEEETTE--EEEEEEEETTTCCEEEEECSE
T ss_pred HHHHHHHHHhcCCEEEEEeeCCccCCCHHHHHHHhhCCCeEEEeCCEEEEEECCCCc--EeEEEEEecCCCceEEEecCE
Confidence 999999999999999999999888766666655556689999999999999987432 445777643335556799999
Q ss_pred EEEeeCCCCChhhhcc-c----ccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHH
Q 016820 297 LFFAIGHEPATKFVDG-Q----LDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQE 370 (382)
Q Consensus 297 vi~~~G~~p~~~~~~~-~----~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~ 370 (382)
+++++|++|+++++.. + +.++++|++.||+ +++|+.|||||+|||+...++.+..|+.||+.+|.+|.++|.+
T Consensus 233 vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 233 FFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDF-SMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp EEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCT-TCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCccChhhhhcccccceeEeccCCCEEeCC-ccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHHHhh
Confidence 9999999999988762 2 6778899999998 7889999999999999765789999999999999999999874
No 10
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.5e-43 Score=325.84 Aligned_cols=307 Identities=47% Similarity=0.801 Sum_probs=252.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+||+|||||++|+++|..|++.|++|+|+|+. .+||.+........+|.++..+...++.+++.+.+.+.+++
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-----~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-----EKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETE 78 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-----STTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-----CCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCE
Confidence 3589999999999999999999999999999942 57777766665566777777778889999999999999999
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCch
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDS 216 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~ 216 (382)
++.+++..++.+++.+.+..++.++.||+||+|+|.+|..|++||.+.+....++.+...+.. ...+++++|||+|.+
T Consensus 79 ~~~~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~v~ViG~G~~ 156 (320)
T 1trb_A 79 IIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGF--FYRNQKVAVIGGGNT 156 (320)
T ss_dssp EECCCEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGG--GGTTSEEEEECSSHH
T ss_pred EEEeeeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCcc--ccCCCeEEEECCCHH
Confidence 999999999988888877446678999999999999999888888765555555554444444 456899999999999
Q ss_pred HHHHHHHHhhcCCEEEEEEeCCCCcchHHHH---HHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccC-CceEEE
Q 016820 217 AMEEANFLTKYGSKVYIIHRRDSFRASKIMQ---NRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVT-GQVSDL 292 (382)
Q Consensus 217 a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~---~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~-~~~~~~ 292 (382)
|+|+|..|.+.+.+|+++++.+.+.....+. .+.+++.||++++++++.++..++++ +.++.+.+..+ +++.++
T Consensus 157 g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--v~~v~~~~~~~~g~~~~i 234 (320)
T 1trb_A 157 AVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMG--VTGVRLRDTQNSDNIESL 234 (320)
T ss_dssp HHHHHHHHTTTSSEEEEECSSSSCCCCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSS--EEEEEEECCTTCCCCEEE
T ss_pred HHHHHHHHHhcCCeEEEEEeCCccccCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCc--eEEEEEEeccCCCceEEE
Confidence 9999999999999999999998875443332 24456789999999999999987642 55577765322 344679
Q ss_pred ecCeEEEeeCCCCChhhhcccccccCCCceeeCCCC----CcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHH
Q 016820 293 KVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGT----THTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYL 368 (382)
Q Consensus 293 ~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~----~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l 368 (382)
++|.+++|+|++|++.++..++.++ +|++.+|+.+ ++|+.|+||++|||+..+++++..|+.+|+.||.+|.++|
T Consensus 235 ~~D~vv~a~G~~p~~~~~~~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 313 (320)
T 1trb_A 235 DVAGLFVAIGHSPNTAIFEGQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYL 313 (320)
T ss_dssp ECSEEEECSCEEESCGGGTTTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EcCEEEEEeCCCCChHHhccccccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHH
Confidence 9999999999999998887677778 9999999953 4899999999999998667899999999999999999999
Q ss_pred HHccC
Q 016820 369 QEIGS 373 (382)
Q Consensus 369 ~~~~~ 373 (382)
.+++.
T Consensus 314 ~~~~~ 318 (320)
T 1trb_A 314 DGLAD 318 (320)
T ss_dssp TC---
T ss_pred Hhccc
Confidence 87653
No 11
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=3.4e-43 Score=323.45 Aligned_cols=303 Identities=30% Similarity=0.516 Sum_probs=248.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+||+|||||++|+++|..|++.|++|+|||+. ..||.+........++++ ..+...++.+++.+.+.+.+++
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-----~~gg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~ 88 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-----VAGGLTAEAPLVENYLGF-KSIVGSELAKLFADHAANYAKI 88 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-----STTGGGGGCSCBCCBTTB-SSBCHHHHHHHHHHHHHTTSEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-----CCCccccccchhhhcCCC-cccCHHHHHHHHHHHHHHcCCE
Confidence 3589999999999999999999999999999952 467777655554555554 3456788899999999999999
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCch
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDS 216 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~ 216 (382)
++.+++..++.+++.+.+.+++.++.||+||+|+|++|+.|+++|.+.+....++.+...+.. ...+++++|||+|.+
T Consensus 89 ~~~~~v~~i~~~~~~~~v~~~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~--~~~~~~v~viG~G~~ 166 (319)
T 3cty_A 89 REGVEVRSIKKTQGGFDIETNDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGY--LFKGKRVVTIGGGNS 166 (319)
T ss_dssp EETCCEEEEEEETTEEEEEESSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGG--GGBTSEEEEECCSHH
T ss_pred EEEeeEEEEEEeCCEEEEEECCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchh--hcCCCeEEEECCCHH
Confidence 888889999988887778777778999999999999999999998766544444444333333 345789999999999
Q ss_pred HHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCe
Q 016820 217 AMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSG 296 (382)
Q Consensus 217 a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~ 296 (382)
|+|+|..|.+.+.+|+++++.+.+.....+.+ .+.+.||++++++++.++..+++. +.++.+.+..+++...+++|.
T Consensus 167 g~e~a~~l~~~g~~V~~i~~~~~~~~~~~l~~-~l~~~gv~i~~~~~v~~i~~~~~~--v~~v~~~~~~~g~~~~i~~D~ 243 (319)
T 3cty_A 167 GAIAAISMSEYVKNVTIIEYMPKYMCENAYVQ-EIKKRNIPYIMNAQVTEIVGDGKK--VTGVKYKDRTTGEEKLIETDG 243 (319)
T ss_dssp HHHHHHHHTTTBSEEEEECSSSSCCSCHHHHH-HHHHTTCCEECSEEEEEEEESSSS--EEEEEEEETTTCCEEEECCSE
T ss_pred HHHHHHHHHhhCCcEEEEEcCCccCCCHHHHH-HHhcCCcEEEcCCeEEEEecCCce--EEEEEEEEcCCCceEEEecCE
Confidence 99999999999999999999988766555553 455789999999999999987531 445777643335456799999
Q ss_pred EEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHc
Q 016820 297 LFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 371 (382)
Q Consensus 297 vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~ 371 (382)
|++++|++|+.+++. .++.++++|++.||+ .++|+.|+|||+|||+..+++.+..|+.+|+.+|.+|.++|.++
T Consensus 244 vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 244 VFIYVGLIPQTSFLKDSGVKLDERGYIVVDS-RQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp EEECCCEEECCGGGTTSCCCBCTTSCBCCCT-TCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EEEeeCCccChHHHhhccccccCCccEeCCC-CCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999998876 457788899999998 58899999999999997656889999999999999999999765
No 12
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.7e-42 Score=317.38 Aligned_cols=303 Identities=32% Similarity=0.549 Sum_probs=244.5
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
++||+|||||++|+++|..|++.|++|+|||+ ..||.+.......+++..+ .....++.+++.+.++++++++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~------~~gG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~ 73 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE------RFGGQILDTVDIENYISVP-KTEGQKLAGALKVHVDEYDVDV 73 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS------STTGGGGGCCEECCBTTBS-SEEHHHHHHHHHHHHHTSCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC------CCCceeccccccccccCcC-CCCHHHHHHHHHHHHHHcCCeE
Confidence 37999999999999999999999999999984 3577665443333333322 2356788899999999999999
Q ss_pred EEe-eEEEEEecCC---cEEEEECCe-EEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEc
Q 016820 138 FTE-TVSKVDFKSR---PFKVFTDSK-SVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIG 212 (382)
Q Consensus 138 ~~~-~v~~i~~~~~---~~~v~~~~~-~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG 212 (382)
+.+ +|..++.+.+ .+.+.++++ ++.||+||+|+|++|..|++||.+.+....++.+...... ...+++++|||
T Consensus 74 ~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~v~VvG 151 (310)
T 1fl2_A 74 IDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGP--LFKGKRVAVIG 151 (310)
T ss_dssp ECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG--GGBTCEEEEEC
T ss_pred EccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHh--hcCCCEEEEEC
Confidence 999 8999987532 677777544 7999999999999999889999876655555554443333 44689999999
Q ss_pred CCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEE
Q 016820 213 GGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDL 292 (382)
Q Consensus 213 ~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~ 292 (382)
+|.+|+|+|..|.+.+.+|+++++.+.+.....+.+++.+..||++++++++.++..+++. +..+++.+..+++..++
T Consensus 152 ~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~--v~~v~~~~~~~g~~~~i 229 (310)
T 1fl2_A 152 GGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGDGSK--VVGLEYRDRVSGDIHNI 229 (310)
T ss_dssp CSHHHHHHHHHHHTTBSEEEEECSSSSCCSCHHHHHHHHTCTTEEEESSEEEEEEEESSSS--EEEEEEEETTTCCEEEE
T ss_pred CCHHHHHHHHHHHHhCCEEEEEEeCcccCccHHHHHHHhhCCCeEEecCCceEEEEcCCCc--EEEEEEEECCCCcEEEE
Confidence 9999999999999999999999999988666555544333379999999999999976432 55577775434555689
Q ss_pred ecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHcc
Q 016820 293 KVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIG 372 (382)
Q Consensus 293 ~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~~ 372 (382)
++|.+++++|++|+.+++...+.++++|++.||+ .++|+.|+|||+|||+..+++++..|+.+|+.+|.+|.++|.++.
T Consensus 230 ~~D~vi~a~G~~p~~~~l~~~l~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 308 (310)
T 1fl2_A 230 ELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDA-KCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTK 308 (310)
T ss_dssp ECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCT-TCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred EcCEEEEeeCCccCchHHhccccccCCCcEEcCC-CCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 9999999999999998876447778899999999 678999999999999986667899999999999999999998764
No 13
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.5e-41 Score=313.84 Aligned_cols=304 Identities=27% Similarity=0.405 Sum_probs=248.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecC---CCcccCCCCCCCCChHHHHHHHHHHHHHc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTT---SDVENFPGFPQGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
..+||+|||||++|+++|..|++.|++|+||| +....||.+... .....++.++ .....++..++.+.+.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie----~~~~~gG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 80 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIE----SLPQLGGQLSALYPEKYIYDVAGFP-KIRAQELINNLKEQMAKF 80 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCHHHHHHCTTSEECCSTTCS-SEEHHHHHHHHHHHHTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEE----cCCCCCceehhcCCCceEeccCCCC-CCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999999999 555677776321 1112344443 235789999999999999
Q ss_pred CcEEEEe-eEEEEEecCC-cEEEEECCeEEEcCEEEEccCC---CCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcE
Q 016820 134 GTQIFTE-TVSKVDFKSR-PFKVFTDSKSVLADTVIVATGA---VAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPL 208 (382)
Q Consensus 134 gi~~~~~-~v~~i~~~~~-~~~v~~~~~~~~~d~lvlA~G~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v 208 (382)
+++++.+ +|..++.+++ .|.+.++++++.||+||+|+|. .|+.|++||.+.+....++. .+.+.. ...++++
T Consensus 81 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~--~~~~~~v 157 (332)
T 3lzw_A 81 DQTICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQ--KFAGRRV 157 (332)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEESSEEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCGG--GGBTCEE
T ss_pred CCcEEccCEEEEEEECCCCcEEEEECCCEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCHH--HcCCCEE
Confidence 9999876 7999998876 7888888888999999999999 88989999988765555444 332222 4458999
Q ss_pred EEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCc
Q 016820 209 AVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQ 288 (382)
Q Consensus 209 ~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~ 288 (382)
+|||+|.+|+|+|..|.+.+.+|+++++.+.+.......+ .+++.||+++.++++.+++.+++ ...+.+.+...++
T Consensus 158 ~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~-~l~~~gv~~~~~~~v~~i~~~~~---~~~v~~~~~~~g~ 233 (332)
T 3lzw_A 158 AILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVE-NLHASKVNVLTPFVPAELIGEDK---IEQLVLEEVKGDR 233 (332)
T ss_dssp EEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSCHHHHH-HHHHSSCEEETTEEEEEEECSSS---CCEEEEEETTSCC
T ss_pred EEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCccHHHHH-HHhcCCeEEEeCceeeEEecCCc---eEEEEEEecCCCc
Confidence 9999999999999999999999999999998866555543 46778999999999999998764 3457777655556
Q ss_pred eEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc--hhhHHHHHHhhHHHHHHHHH
Q 016820 289 VSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK--KYRQAVTAAGTGCMAALEAE 365 (382)
Q Consensus 289 ~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~--~~~~~~~a~~~g~~aa~~i~ 365 (382)
+.++++|.+++++|++|+.+++. .++.. ++|++.||+ +++|+.|||||+|||+.. .++.+..|+.+|+.+|.+|.
T Consensus 234 ~~~~~~D~vv~a~G~~p~~~~~~~~~~~~-~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 311 (332)
T 3lzw_A 234 KEILEIDDLIVNYGFVSSLGPIKNWGLDI-EKNSIVVKS-TMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAK 311 (332)
T ss_dssp EEEEECSEEEECCCEECCCGGGGGSSCCE-ETTEEECCT-TSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEECCEEEEeeccCCCchHHhhcCccc-cCCeEEeCC-CCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHH
Confidence 67899999999999999998876 45666 689999998 788999999999999842 37889999999999999999
Q ss_pred HHHHHccCc
Q 016820 366 HYLQEIGSQ 374 (382)
Q Consensus 366 ~~l~~~~~~ 374 (382)
+++.+++..
T Consensus 312 ~~l~~~~~~ 320 (332)
T 3lzw_A 312 AYMDPKARV 320 (332)
T ss_dssp HHHCTTSCS
T ss_pred HhhChhhcc
Confidence 999876543
No 14
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.3e-40 Score=325.10 Aligned_cols=305 Identities=32% Similarity=0.543 Sum_probs=250.3
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
...+||+|||||++|+++|..|++.|++|+|+|+ ..||.+.......+++..+ .....++.+++.+.++++|+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~------~~GG~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~gv 282 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE------RFGGQVLDTVDIENYISVP-KTEGQKLAGALKAHVSDYDV 282 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS------STTGGGTTCSCBCCBTTBS-SBCHHHHHHHHHHHHHTSCE
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC------CCCCcccccccccccCCCC-CCCHHHHHHHHHHHHHHcCC
Confidence 3468999999999999999999999999999994 4677766544444444433 34678899999999999999
Q ss_pred EEEEe-eEEEEEecC---CcEEEEECC-eEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEE
Q 016820 136 QIFTE-TVSKVDFKS---RPFKVFTDS-KSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAV 210 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~---~~~~v~~~~-~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~V 210 (382)
+++.+ +|..++++. +.+.+.+++ .++.||+||+|||.+|+.+++||.+.+....++.+..++.. ...+++|+|
T Consensus 283 ~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~--~~~~k~V~V 360 (521)
T 1hyu_A 283 DVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGP--LFKGKRVAV 360 (521)
T ss_dssp EEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGG--GGBTSEEEE
T ss_pred EEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchh--hcCCCeEEE
Confidence 99999 899998653 367777654 47999999999999999999999877666555555444333 456899999
Q ss_pred EcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccC-CCcEEEcCceeEEEEecCCceeeeeEEEEeccCCce
Q 016820 211 IGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTN-PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQV 289 (382)
Q Consensus 211 vG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~ 289 (382)
||+|.+|+|+|..|.+.+.+|+++.+.+.+.....+. +.+.+ .||++++++.+.++..+++. +.++.+.+..+++.
T Consensus 361 iGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~~~l~-~~l~~~~gV~v~~~~~v~~i~~~~~~--v~~v~~~~~~~g~~ 437 (521)
T 1hyu_A 361 IGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQ-DKVRSLKNVDIILNAQTTEVKGDGSK--VVGLEYRDRVSGDI 437 (521)
T ss_dssp ECCSHHHHHHHHHHHHHBSEEEEECSSSSCCSCHHHH-HHHTTCTTEEEECSEEEEEEEECSSS--EEEEEEEETTTCCE
T ss_pred ECCCHHHHHHHHHHHhhCCEEEEEEeCcccCcCHHHH-HHHhcCCCcEEEeCCEEEEEEcCCCc--EEEEEEEeCCCCce
Confidence 9999999999999999999999999999887665555 44555 79999999999999886432 55577765444555
Q ss_pred EEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHH
Q 016820 290 SDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQ 369 (382)
Q Consensus 290 ~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~ 369 (382)
..+++|.+++++|++|++.++...+.++++|++.||+ .++|+.|+|||+|||+..+++++..|+.+|..||.+|..+|.
T Consensus 438 ~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~I~Vd~-~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L~ 516 (521)
T 1hyu_A 438 HSVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDA-KCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLI 516 (521)
T ss_dssp EEEECSEEEECCCEEESCGGGTTTSCBCTTSCBCCCT-TCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCEEEECcCCCCCchHHhhhhccCCCCcEEeCC-CCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHHH
Confidence 6899999999999999998887457778899999998 788999999999999987678999999999999999999998
Q ss_pred HccC
Q 016820 370 EIGS 373 (382)
Q Consensus 370 ~~~~ 373 (382)
+++.
T Consensus 517 ~~~~ 520 (521)
T 1hyu_A 517 RTKI 520 (521)
T ss_dssp HHSC
T ss_pred hhhc
Confidence 7653
No 15
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=9.2e-40 Score=302.50 Aligned_cols=310 Identities=26% Similarity=0.339 Sum_probs=239.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCC---cccCCCCCCCCChHHHHHHHHHHHHHc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSD---VENFPGFPQGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
.++||+|||||++|+++|..|++.|++|+||| +....||.+..... ...++.++ .....++.+++.+.+.++
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie----~~~~~gg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 78 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVD----PLPEPGGQLTALYPEKYIYDVAGFP-KVYAKDLVKGLVEQVAPF 78 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----SSSSSCHHHHHTCTTSEECCSTTCS-SEEHHHHHHHHHHHHGGG
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEe----CCCCCCCeeeccCCCceeeccCCCC-CCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999999999999 44456776642211 12223332 245678889999999999
Q ss_pred CcEEEEe-eEEEEEecCCcEEEEECCe-EEEcCEEEEccCC---CCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcE
Q 016820 134 GTQIFTE-TVSKVDFKSRPFKVFTDSK-SVLADTVIVATGA---VAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPL 208 (382)
Q Consensus 134 gi~~~~~-~v~~i~~~~~~~~v~~~~~-~~~~d~lvlA~G~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v 208 (382)
+++++.+ +|..++.+++.+.+.++++ ++.||+||+|+|. .|+.++++|.+.+....++.+ +.+.. ...++++
T Consensus 79 ~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~-~~~~~--~~~~~~v 155 (335)
T 2zbw_A 79 NPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYA-VKSKA--EFQGKRV 155 (335)
T ss_dssp CCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESS-CSCGG--GGTTCEE
T ss_pred CCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEe-cCchh--hcCCCEE
Confidence 9999877 7999998877787877554 7999999999999 577778888766544333222 11111 3357999
Q ss_pred EEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHH---HHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEecc
Q 016820 209 AVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKI---MQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLV 285 (382)
Q Consensus 209 ~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~---~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~ 285 (382)
+|||+|.+|+|+|..|.+.+.+|+++.+.+.+..... .+++.+++.||+++.++.+.+++.++. +..+.+....
T Consensus 156 ~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~---~~~v~~~~~~ 232 (335)
T 2zbw_A 156 LIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVKELMKAHEEGRLEVLTPYELRRVEGDER---VRWAVVFHNQ 232 (335)
T ss_dssp EEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSCHHHHHHHHHHHHTTSSEEETTEEEEEEEESSS---EEEEEEEETT
T ss_pred EEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCccHHHHHHHHhccccCCeEEecCCcceeEccCCC---eeEEEEEECC
Confidence 9999999999999999999999999999987743222 224556778999999999999998532 4457776432
Q ss_pred CCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc--hhhHHHHHHhhHHHHHH
Q 016820 286 TGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK--KYRQAVTAAGTGCMAAL 362 (382)
Q Consensus 286 ~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~--~~~~~~~a~~~g~~aa~ 362 (382)
+++..++++|.+++++|++|+.+++. .++..+ +|++.||+ +++|+.|||||+|||+.. .++.+..|+.+|..+|.
T Consensus 233 ~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~ 310 (335)
T 2zbw_A 233 TQEELALEVDAVLILAGYITKLGPLANWGLALE-KNKIKVDT-TMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAAN 310 (335)
T ss_dssp TCCEEEEECSEEEECCCEEEECGGGGGSCCCEE-TTEEECCT-TCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCEEEEeecCCCCchHhhhcceecc-CCeeeeCC-CCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHH
Confidence 35557899999999999999988776 356665 78999998 788999999999999853 25789999999999999
Q ss_pred HHHHHHHHccCcccccc
Q 016820 363 EAEHYLQEIGSQEDKSE 379 (382)
Q Consensus 363 ~i~~~l~~~~~~~~~~~ 379 (382)
+|..+|.+....+....
T Consensus 311 ~i~~~l~~~~~~~~~~~ 327 (335)
T 2zbw_A 311 HAAAYANPALKVNPGHS 327 (335)
T ss_dssp HHHHHHCTTSCSSCCCG
T ss_pred HHHHHhhhhhccCCccc
Confidence 99999987766554433
No 16
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=8.5e-40 Score=297.30 Aligned_cols=288 Identities=22% Similarity=0.311 Sum_probs=232.9
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHc-CcE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRF-GTQ 136 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gi~ 136 (382)
++||+|||||++|+++|..|++.|++|+|||+. .. .+.+.. ....++.. ......++.+++.+.+.++ +++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~----~~-~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~ 73 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAG----ER-RNRFAS--HSHGFLGQ-DGKAPGEIIAEARRQIERYPTIH 73 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECC----CC-GGGGCS--CCCSSTTC-TTCCHHHHHHHHHHHHTTCTTEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCC----Cc-ccccch--hhcCCcCC-CCCCHHHHHHHHHHHHHhcCCeE
Confidence 379999999999999999999999999999952 11 121111 11223333 2467789999999999887 789
Q ss_pred EEEeeEEEEEecCCcEEEEECC-eEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCc
Q 016820 137 IFTETVSKVDFKSRPFKVFTDS-KSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGD 215 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~-~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~ 215 (382)
++.++|+.++.+++.+.+.+++ .++.||+||+|+|.+|+.|.+||.+.++....+.+.+.+.. ...+++++|||+|.
T Consensus 74 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~v~vvG~G~ 151 (297)
T 3fbs_A 74 WVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGY--ELDQGKIGVIAASP 151 (297)
T ss_dssp EEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTG--GGTTCEEEEECCST
T ss_pred EEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcch--hhcCCEEEEEecCc
Confidence 8888999999988888888755 46999999999999999999999887766666666655554 55689999999999
Q ss_pred hHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecC
Q 016820 216 SAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVS 295 (382)
Q Consensus 216 ~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D 295 (382)
+|+|+|..|.+.+ +|+++.+.+. .....+ .+.+++.||+++. +++.++..++ .+.+.+ + .++++|
T Consensus 152 ~~~e~a~~l~~~g-~v~~v~~~~~-~~~~~~-~~~l~~~gv~i~~-~~v~~i~~~~------~v~~~~---g--~~~~~D 216 (297)
T 3fbs_A 152 MAIHHALMLPDWG-ETTFFTNGIV-EPDADQ-HALLAARGVRVET-TRIREIAGHA------DVVLAD---G--RSIALA 216 (297)
T ss_dssp THHHHHHHGGGTS-EEEEECTTTC-CCCHHH-HHHHHHTTCEEEC-SCEEEEETTE------EEEETT---S--CEEEES
T ss_pred cHHHHHHHhhhcC-cEEEEECCCC-CCCHHH-HHHHHHCCcEEEc-ceeeeeecCC------eEEeCC---C--CEEEEE
Confidence 9999999999998 9999998776 334444 4667889999995 8899998654 166543 3 579999
Q ss_pred eEEEeeCCCCChhhhc-cccccc--CCC-ceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHc
Q 016820 296 GLFFAIGHEPATKFVD-GQLDLH--SDG-YIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 371 (382)
Q Consensus 296 ~vi~~~G~~p~~~~~~-~~~~~~--~~g-~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~ 371 (382)
.+++++|++|+.+++. .++..+ +.| ++.+|+ +++|+.|||||+|||+.. ++.+..|+.+|+.+|.+|.++|.+.
T Consensus 217 ~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~-~~~t~~~~vya~GD~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 217 GLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDP-MKQTTARGIFACGDVARP-AGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp EEEECCEEECCCSCHHHHTCCEEEETTEEEECCCT-TCBCSSTTEEECSGGGCT-TCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEccCcccCchhHHhcCCccccCCCCceEEeCC-CCccCCCCEEEEeecCCc-hHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 9999999999988776 455555 467 899998 688999999999999974 7899999999999999999999865
Q ss_pred c
Q 016820 372 G 372 (382)
Q Consensus 372 ~ 372 (382)
.
T Consensus 295 ~ 295 (297)
T 3fbs_A 295 E 295 (297)
T ss_dssp -
T ss_pred h
Confidence 4
No 17
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.7e-38 Score=296.98 Aligned_cols=307 Identities=24% Similarity=0.324 Sum_probs=232.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCC---cccCCCCCCCCChHHHHHHHHHHHHHc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSD---VENFPGFPQGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
..+||+|||||++|+++|..|++.|++|+||| +....||.+..... ...++.++ .....++.+++.+.+.++
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie----~~~~~gg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 87 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIE----SMPQLGGQLAALYPEKHIYDVAGFP-EVPAIDLVESLWAQAERY 87 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCHHHHHTCTTSEECCSTTCS-SEEHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEe----cCCCCCCcccccCCCcccccCCCCC-CCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999999999999999 44456776642211 12233332 245688899999999999
Q ss_pred CcEEEEe-eEEEEEecCC-cEEEEECCe-EEEcCEEEEccCC---CCcCCCCCC-CccccCCCcceeeeccCCCCCCCCC
Q 016820 134 GTQIFTE-TVSKVDFKSR-PFKVFTDSK-SVLADTVIVATGA---VAKKLQFPG-SDAFWNRGISACAVCDGAAPIFRDK 206 (382)
Q Consensus 134 gi~~~~~-~v~~i~~~~~-~~~v~~~~~-~~~~d~lvlA~G~---~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (382)
+++++.+ +|+.++.+++ .+.+.++++ ++.||+||+|+|. .|..++++| .+.+....++.+ +.+.. ...++
T Consensus 88 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~-~~~~~--~~~~~ 164 (360)
T 3ab1_A 88 NPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYA-VKSVE--DFKGK 164 (360)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESS-CSCGG--GGTTC
T ss_pred CCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEe-cCCHH--HcCCC
Confidence 9999877 7999998765 677777554 7999999999999 566677888 554443333322 11111 34579
Q ss_pred cEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHH---HHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEe
Q 016820 207 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQ---NRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKN 283 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~---~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~ 283 (382)
+++|||+|.+|+|+|..|.+.+.+|+++++.+.+....... .+.+++.||+++.++++.++..++++ +..+.+..
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--v~~v~~~~ 242 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAHEVERARANGTIDVYLETEVASIEESNGV--LTRVHLRS 242 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCSHHHHSSHHHHHHTSEEEESSEEEEEEEEETTE--EEEEEEEE
T ss_pred cEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCHHHHHHHHHHhhcCceEEEcCcCHHHhccCCCc--eEEEEEEe
Confidence 99999999999999999999999999999988764332221 23455678999999999999987542 44566652
Q ss_pred ccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc--hhhHHHHHHhhHHHH
Q 016820 284 LVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK--KYRQAVTAAGTGCMA 360 (382)
Q Consensus 284 ~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~--~~~~~~~a~~~g~~a 360 (382)
.+++...+++|.+++++|++|+.+++. .++.++ +|++.||+ +++|+.|+|||+|||+.. .++.+..|+.||..+
T Consensus 243 -~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~a 319 (360)
T 3ab1_A 243 -SDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMA 319 (360)
T ss_dssp -TTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEE-TTEEECCT-TSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHH
T ss_pred -cCCCeEEEeCCEEEECCCCCCCHHHHHhhccccc-cCeeeecC-CCcCCCCCEEEecCccCCCCccceeehhHHHHHHH
Confidence 224446899999999999999988776 356665 79999999 788999999999999853 367899999999999
Q ss_pred HHHHHHHHHHccCccc
Q 016820 361 ALEAEHYLQEIGSQED 376 (382)
Q Consensus 361 a~~i~~~l~~~~~~~~ 376 (382)
|.+|..++.+....++
T Consensus 320 a~~i~~~l~~~~~~~~ 335 (360)
T 3ab1_A 320 VRHSLSYIKPGEKIRN 335 (360)
T ss_dssp HHHHHHHHSCC-----
T ss_pred HHHHHhhcCCccccCc
Confidence 9999999987665444
No 18
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=5.8e-39 Score=293.17 Aligned_cols=293 Identities=21% Similarity=0.376 Sum_probs=224.7
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCC--CCCChHHHHHHHHHHHHHc
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFP--QGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 133 (382)
+..+||+||||||||++||..|++.|++|+|||+. ..||.+. .++++++ ..+...++.+...+.+.++
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-----~~gg~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-----TNRNRVT-----QNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-----CCGGGGS-----SCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-----CCCCeee-----eecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 45699999999999999999999999999999952 3455442 1233332 3467788888777777766
Q ss_pred C-cEEEEeeEEEEEec-CCcEEEEE-CCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEE
Q 016820 134 G-TQIFTETVSKVDFK-SRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAV 210 (382)
Q Consensus 134 g-i~~~~~~v~~i~~~-~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~V 210 (382)
+ +.++..++..++.. .+.+.+.+ ++.++.||+||+|||++|+.|++||.+.++...+..+...+.. ...+++++|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~--~~~~~~~~V 151 (304)
T 4fk1_A 74 PSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGW--ELKDQPLII 151 (304)
T ss_dssp TTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSG--GGTTSCEEE
T ss_pred CCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchh--HhcCCceee
Confidence 5 55666677777654 44566665 4567999999999999999999999887777777777666665 556788999
Q ss_pred EcCCch-HHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCce
Q 016820 211 IGGGDS-AMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQV 289 (382)
Q Consensus 211 vG~G~~-a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~ 289 (382)
||+|.. ++++|..+.+.+.+|+++.+.+.+. ..+. +.+++.|+.++.+ .+..+..+++ .+..+++. ++
T Consensus 152 IggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~--~~~~-~~l~~~g~~~~~~-~v~~~~~~~~--~~~~v~~~-----~g 220 (304)
T 4fk1_A 152 ISENEDHTLHMTKLVYNWSTDLVIATNGNELS--QTIM-DELSNKNIPVITE-SIRTLQGEGG--YLKKVEFH-----SG 220 (304)
T ss_dssp ECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC--HHHH-HHHHTTTCCEECS-CEEEEESGGG--CCCEEEET-----TS
T ss_pred ecCCCchhhhHHHHHHhCCceEEEEeccccch--hhhh-hhhhccceeEeee-eEEEeecCCC--eeeeeecc-----cc
Confidence 988865 6788999999999999998876653 3333 4577889999866 4777776543 24445543 33
Q ss_pred EEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHH
Q 016820 290 SDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYL 368 (382)
Q Consensus 290 ~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l 368 (382)
.++++|.++++.|.+|+..++. .++.++++|+|.||+ +++|+.|||||+|||++..++++..|+.+|+.||.+|.++|
T Consensus 221 ~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~-~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 221 LRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDD-FGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp CEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSST-TCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeecceeeeeccccCChhhhhcCeEECCCCCEEECc-CCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 6788998888887776665554 678899999999998 78999999999999987667789999999999999999999
Q ss_pred HHcc
Q 016820 369 QEIG 372 (382)
Q Consensus 369 ~~~~ 372 (382)
.+++
T Consensus 300 ~~e~ 303 (304)
T 4fk1_A 300 TDER 303 (304)
T ss_dssp HHHH
T ss_pred hhcC
Confidence 8754
No 19
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.9e-38 Score=294.54 Aligned_cols=292 Identities=18% Similarity=0.298 Sum_probs=219.5
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecC---------CCcccCCCCC------CCCChHHH
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTT---------SDVENFPGFP------QGILGGDL 122 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~---------~~~~~~~~~~------~~~~~~~~ 122 (382)
.+||+|||||++|+++|..|++.|++|+||| +...+||.|... .....+++++ ......++
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie----~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILD----AEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEV 78 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEEC----CSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEE----CCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHH
Confidence 4799999999999999999999999999999 444566665421 1112222222 12345789
Q ss_pred HHHHHHHHHHcCcEEEEe-eEEEEEecCCcEE-EEECCeEEEcCEEEEccCC--CCcCCCCCCCccccCCCcceeeeccC
Q 016820 123 MDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFK-VFTDSKSVLADTVIVATGA--VAKKLQFPGSDAFWNRGISACAVCDG 198 (382)
Q Consensus 123 ~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~-v~~~~~~~~~d~lvlA~G~--~~~~~~~~g~~~~~~~~~~~~~~~~~ 198 (382)
.+++.+.+++++++++.+ +|++++.+++.|. +.++++++.||+||+|+|. .|+.|.++|...+....++.+.+...
T Consensus 79 ~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (357)
T 4a9w_A 79 LAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTP 158 (357)
T ss_dssp HHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCS
T ss_pred HHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCCh
Confidence 999999999999999888 7999999998888 8888889999999999996 67778999988766666666555555
Q ss_pred CCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC-CCcch----HHH----HHHhcc-----------------
Q 016820 199 AAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD-SFRAS----KIM----QNRALT----------------- 252 (382)
Q Consensus 199 ~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~-~~~~~----~~~----~~~~l~----------------- 252 (382)
. ...+++++|||+|.+|+|+|..|.+.+ +|+++.+.. .+... ..+ .+++.+
T Consensus 159 ~--~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (357)
T 4a9w_A 159 A--PFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDI 235 (357)
T ss_dssp G--GGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CB
T ss_pred h--hcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCc
Confidence 4 556899999999999999999999998 699998874 33211 111 111111
Q ss_pred ----------CCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCc
Q 016820 253 ----------NPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGY 321 (382)
Q Consensus 253 ----------~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~ 321 (382)
+.|+ +..+..+.+++.+. +.+. ++.++++|.|++++|++|+++++. .++. +++|+
T Consensus 236 ~~~~~~~~~~~~g~-i~~~~~v~~~~~~~-------v~~~-----~g~~i~~D~vi~a~G~~p~~~~l~~~gl~-~~~G~ 301 (357)
T 4a9w_A 236 VMVPPVLDARARGV-LAAVPPPARFSPTG-------MQWA-----DGTERAFDAVIWCTGFRPALSHLKGLDLV-TPQGQ 301 (357)
T ss_dssp CCCHHHHHHHHTTC-CCEECCCSEEETTE-------EECT-----TSCEEECSEEEECCCBCCCCGGGTTTTCB-CTTSC
T ss_pred ccChhHHHHHhcCc-eEEecCcceEeCCe-------eEEC-----CCCEecCCEEEECCCcCCCCcccCccccc-CCCCC
Confidence 1222 23334444444322 4433 236799999999999999988886 4666 78899
Q ss_pred eeeCCC-CCcCCCCceEEec--ccCCchhhHHHHHHhhHHHHHHHHHHHHHH
Q 016820 322 IITKPG-TTHTSVPGVFAAG--DVQDKKYRQAVTAAGTGCMAALEAEHYLQE 370 (382)
Q Consensus 322 i~vd~~-~~~t~~~~vya~G--D~~~~~~~~~~~a~~~g~~aa~~i~~~l~~ 370 (382)
+.||+. +++|+.|||||+| ||....++.+..|+.+|+.+|.+|.++|.+
T Consensus 302 i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 302 VEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred ccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 999994 3899999999999 666545678888999999999999999987
No 20
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=5.7e-39 Score=307.03 Aligned_cols=287 Identities=19% Similarity=0.207 Sum_probs=214.4
Q ss_pred ccEEEECCcHHHHHHHHHHHHcC--CCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAE--LKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
++|||||||+||+++|..|+++| .+|+|||+.. ...+..+..+... ...... ....+......+.++.+++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~---~~~~~~~~l~~~~---~~~~~~-~~~~~~~~~~~~~~~~~i~ 73 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR---DMSFANCALPYVI---GEVVED-RRYALAYTPEKFYDRKQIT 73 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS---CSSBCGGGHHHHH---TTSSCC-GGGTBCCCHHHHHHHHCCE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC---CCCCCcchhHHHH---cCCccc-hhhhhhcCHHHHHHhcCCE
Confidence 36999999999999999999998 5799999532 1111111100000 000000 0000111122345667999
Q ss_pred EEEe-eEEEEEecCCcEEEEECC----eEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEE
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTDS----KSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVI 211 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~~----~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv 211 (382)
++.+ +|+.|+.+.+.+.+.... .++.||+||+|||++|+.|+++|...+..+.+.++..+........+++++||
T Consensus 74 ~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvVi 153 (437)
T 4eqs_A 74 VKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVV 153 (437)
T ss_dssp EEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEE
Confidence 9887 799999988877766432 35899999999999999999999777666666655544433223347899999
Q ss_pred cCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccC
Q 016820 212 GGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVT 286 (382)
Q Consensus 212 G~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~ 286 (382)
|+|.+|+|+|..+.++|.+||++++.+.+.. ......+.+++.||+++.++.+++++.+. +.+++
T Consensus 154 GgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~-------v~~~~--- 223 (437)
T 4eqs_A 154 GAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE-------ITFKS--- 223 (437)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETTE-------EEETT---
T ss_pred CCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCCe-------eeecC---
Confidence 9999999999999999999999999987732 22333467888999999999999887654 55543
Q ss_pred CceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCch---------hhHHHHHHhh
Q 016820 287 GQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKK---------YRQAVTAAGT 356 (382)
Q Consensus 287 ~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~---------~~~~~~a~~~ 356 (382)
+ ..+++|.+++++|.+|++.+++ .++.++++|+|.||+ +++|++|||||+|||+..+ ++.++.|..|
T Consensus 224 g--~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~-~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~ 300 (437)
T 4eqs_A 224 G--KVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVND-KFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRA 300 (437)
T ss_dssp S--CEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCT-TCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHH
T ss_pred C--eEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCC-CccCCCCCEEEEEEccCcccccCCccccchhHHHHHHH
Confidence 3 5789999999999999998876 578889999999998 7899999999999998532 3568999999
Q ss_pred HHHHHHHHH
Q 016820 357 GCMAALEAE 365 (382)
Q Consensus 357 g~~aa~~i~ 365 (382)
|+.+|+||+
T Consensus 301 g~~~a~ni~ 309 (437)
T 4eqs_A 301 ASIVAEQIA 309 (437)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999999986
No 21
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=1e-37 Score=300.17 Aligned_cols=288 Identities=20% Similarity=0.221 Sum_probs=210.3
Q ss_pred ccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 59 TKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
+||+|||||++|+++|..|++. |.+|+|||+........++..... .+ ......++.....+.+.+++++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~gi~ 74 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYF------NH--TINELHEARYITEEELRRQKIQ 74 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------CCCCHHHHHHTTEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhh------cC--CCCCHHHhhcCCHHHHHHCCCE
Confidence 6999999999999999999999 899999995422111111111100 00 0001122222244556778999
Q ss_pred EEEe-eEEEEEecCCcEEEEE--CCeEEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCCCCCCCcEEE
Q 016820 137 IFTE-TVSKVDFKSRPFKVFT--DSKSVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAPIFRDKPLAV 210 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~--~~~~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~v~V 210 (382)
++.+ +|..++.+++.+.+.. ++.++.||+||+|||++|..|++||.+. +..+........... ...+++++|
T Consensus 75 ~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~--~~~~~~vvV 152 (452)
T 3oc4_A 75 LLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPL--LENSQTVAV 152 (452)
T ss_dssp EECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHH--HHTCSEEEE
T ss_pred EEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHH--HhcCCEEEE
Confidence 9876 7999999988877742 3456999999999999999999998764 111111111111111 235789999
Q ss_pred EcCCchHHHHHHHHhhcCCEEEEEEeCCCCcch------HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEec
Q 016820 211 IGGGDSAMEEANFLTKYGSKVYIIHRRDSFRAS------KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNL 284 (382)
Q Consensus 211 vG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~ 284 (382)
||+|.+|+|+|..|.+.|.+|+++.+.+.+... .....+.+++.||+++.++++.+++..+++ +.+..
T Consensus 153 iGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-----v~v~~- 226 (452)
T 3oc4_A 153 IGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANG-----IVLET- 226 (452)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSC-----EEEEE-
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCe-----EEEEE-
Confidence 999999999999999999999999998876421 223346788899999999999999965543 33333
Q ss_pred cCCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCch---------hhHHHHHHh
Q 016820 285 VTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKK---------YRQAVTAAG 355 (382)
Q Consensus 285 ~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~---------~~~~~~a~~ 355 (382)
+++ ++++|.|++|+|++|++.++...+.++++|++.||+ +++|+.|+|||+|||+..+ ++.+..|..
T Consensus 227 --~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~ 302 (452)
T 3oc4_A 227 --SEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDA-YLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVR 302 (452)
T ss_dssp --SSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCT-TCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHH
T ss_pred --CCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECc-CccCCCCCEEEEEeeEEeccccCCceeecchHHHHHH
Confidence 223 799999999999999999887557788899999998 7899999999999999743 258899999
Q ss_pred hHHHHHHHHHH
Q 016820 356 TGCMAALEAEH 366 (382)
Q Consensus 356 ~g~~aa~~i~~ 366 (382)
||+.+|.+|..
T Consensus 303 ~g~~aa~~i~g 313 (452)
T 3oc4_A 303 TGLVVANNLEE 313 (452)
T ss_dssp HHHHHTTSSSS
T ss_pred HHHHHHHHhcC
Confidence 99999999864
No 22
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=4.9e-36 Score=290.58 Aligned_cols=294 Identities=21% Similarity=0.180 Sum_probs=217.1
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCc------------------c--cCCCCCC
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDV------------------E--NFPGFPQ 115 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~------------------~--~~~~~~~ 115 (382)
+..+||+|||||++|+++|..|+++|++|+|||+ . ..||.|....+. . .++....
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~----~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 92 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVES----H-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEG 92 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEES----S-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEec----C-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 4568999999999999999999999999999994 2 567765432110 0 1111111
Q ss_pred CCChHHHHHH-----------HHHHHHHcCcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCC---CCCC
Q 016820 116 GILGGDLMDR-----------CRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKL---QFPG 181 (382)
Q Consensus 116 ~~~~~~~~~~-----------~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~---~~~g 181 (382)
......+.++ +...+++.+++++.+++..++... +.+..++.++.||+||+|||++|..| ++||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~--~~v~~~g~~~~~d~lviAtG~~p~~p~~~~i~G 170 (478)
T 3dk9_A 93 KFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK--PTIEVSGKKYTAPHILIATGGMPSTPHESQIPG 170 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSS--CEEEETTEEEECSCEEECCCEEECCCCTTTSTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCe--EEEEECCEEEEeeEEEEccCCCCCCCCcCCCCC
Confidence 2333333333 344456679999999877776543 45556778899999999999999998 8898
Q ss_pred CccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCc
Q 016820 182 SDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKI 256 (382)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv 256 (382)
.+... .+...... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+.+.. ......+.+++.||
T Consensus 171 ~~~~~-----~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv 243 (478)
T 3dk9_A 171 ASLGI-----TSDGFFQL--EELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGV 243 (478)
T ss_dssp GGGSB-----CHHHHTTC--CSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTC
T ss_pred CceeE-----chHHhhch--hhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCC
Confidence 76211 11111112 23478999999999999999999999999999999887532 12223466788999
Q ss_pred EEEcCceeEEEEecCCceeeeeEEEEeccCCc--eEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcC
Q 016820 257 DVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQ--VSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHT 331 (382)
Q Consensus 257 ~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~--~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t 331 (382)
+++.++.+.+++.++++.. ..+.+.+...++ +..+++|.|++++|++|++..+ . .++.++++|++.||+ +++|
T Consensus 244 ~i~~~~~v~~i~~~~~~~~-~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~t 321 (478)
T 3dk9_A 244 EVLKFSQVKEVKKTLSGLE-VSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDE-FQNT 321 (478)
T ss_dssp EEETTEEEEEEEECSSSEE-EEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCT-TCBC
T ss_pred EEEeCCEEEEEEEcCCCcE-EEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCC-Cccc
Confidence 9999999999998765411 123343211122 2679999999999999999843 2 578888999999998 7899
Q ss_pred CCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 332 SVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 332 ~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
+.|||||+|||++ .++.++.|..||+.+|.+|..
T Consensus 322 ~~~~IyA~GD~~~-~~~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 322 NVKGIYAVGDVCG-KALLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp SSTTEEECGGGGC-SSCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEEecCC-CCccHhHHHHHHHHHHHHHcC
Confidence 9999999999996 367899999999999999874
No 23
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.8e-36 Score=293.27 Aligned_cols=295 Identities=19% Similarity=0.216 Sum_probs=217.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc-----------------cC--CCCC---
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE-----------------NF--PGFP--- 114 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~-----------------~~--~~~~--- 114 (382)
.++||+|||||++|+++|..|+++|++|+||| +...+||.|....... .+ .+++
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE----~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~ 80 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIE----KNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSE 80 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----CSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEe----CCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCC
Confidence 45899999999999999999999999999999 4446777654321100 00 0110
Q ss_pred CCCChHHHHH-----------HHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcCCCCC
Q 016820 115 QGILGGDLMD-----------RCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKLQFP 180 (382)
Q Consensus 115 ~~~~~~~~~~-----------~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~~~~~ 180 (382)
......++.. .+.+.+++.+++++.+++..++ .+.+.+.+.+ .++.||+||+|||++|..|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~--~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~ 158 (474)
T 1zmd_A 81 VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITG--KNQVTATKADGGTQVIDTKNILIATGSEVTPFPGI 158 (474)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEE--TTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEec--CCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCC
Confidence 0122333322 2345567789999999876665 4567776543 4699999999999999999888
Q ss_pred CCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---h---HHHHHHhccCC
Q 016820 181 GSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---S---KIMQNRALTNP 254 (382)
Q Consensus 181 g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---~---~~~~~~~l~~~ 254 (382)
|.+.. .+......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . .....+.+++.
T Consensus 159 g~~~~---~v~t~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 233 (474)
T 1zmd_A 159 TIDED---TIVSSTGALSL--KKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQ 233 (474)
T ss_dssp CCCSS---SEECHHHHTTC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHT
T ss_pred CCCcC---cEEcHHHHhhc--cccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHC
Confidence 86541 11122111122 23468999999999999999999999999999999887633 1 22234567788
Q ss_pred CcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhh--hc-ccccccCCCceeeCCCCCcC
Q 016820 255 KIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKF--VD-GQLDLHSDGYIITKPGTTHT 331 (382)
Q Consensus 255 gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~--~~-~~~~~~~~g~i~vd~~~~~t 331 (382)
||++++++++.+++.++++. ..+.+.....+++.++++|.|++++|++|++.+ ++ .++.++++|++.||+ .++|
T Consensus 234 Gv~i~~~~~v~~i~~~~~~~--~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~t 310 (474)
T 1zmd_A 234 GFKFKLNTKVTGATKKSDGK--IDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNT-RFQT 310 (474)
T ss_dssp TCEEECSEEEEEEEECTTSC--EEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCT-TCBC
T ss_pred CCEEEeCceEEEEEEcCCce--EEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECc-CCcc
Confidence 99999999999999876531 123443222244568999999999999999986 33 477788889999999 6889
Q ss_pred CCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 332 SVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 332 ~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
+.|+|||+|||+.. ++.++.|..||+.+|.+|..
T Consensus 311 ~~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 311 KIPNIYAIGDVVAG-PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp SSTTEEECGGGSSS-CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeecCCC-CccHHHHHHHHHHHHHHhcC
Confidence 99999999999974 57888999999999999974
No 24
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.3e-36 Score=292.61 Aligned_cols=295 Identities=23% Similarity=0.264 Sum_probs=217.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCc-------------------ccC--CCCCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDV-------------------ENF--PGFPQ 115 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~-------------------~~~--~~~~~ 115 (382)
.++||+|||||++|+++|..|++.|++|+||| +....||.|....+. ..+ .....
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liE----k~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 99 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVE----KRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP 99 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEE----SSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEe----cCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC
Confidence 45899999999999999999999999999999 445678875432111 000 00001
Q ss_pred CCChHHHH-----------HHHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcCCCCCC
Q 016820 116 GILGGDLM-----------DRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKLQFPG 181 (382)
Q Consensus 116 ~~~~~~~~-----------~~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~~~~~g 181 (382)
......+. ..+...+++.+++++.+++..++ .+.+.+.+.+ .++.||+||+|||++| +.+||
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~--~~~~~v~~~~g~~~~~~~d~lViATGs~p--~~ipg 175 (491)
T 3urh_A 100 KLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLG--QGKVSVTNEKGEEQVLEAKNVVIATGSDV--AGIPG 175 (491)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECS--SSEEEEECTTSCEEEEECSEEEECCCEEC--CCBTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEec--CCEEEEEeCCCceEEEEeCEEEEccCCCC--CCCCC
Confidence 12222222 22344556779999999876654 4456666544 3699999999999986 45677
Q ss_pred Ccc-ccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCC
Q 016820 182 SDA-FWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPK 255 (382)
Q Consensus 182 ~~~-~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~g 255 (382)
.+. +....++.+...... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~g 253 (491)
T 3urh_A 176 VEVAFDEKTIVSSTGALAL--EKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQG 253 (491)
T ss_dssp BCCCCCSSSEECHHHHTSC--SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTT
T ss_pred cccccCCeeEEehhHhhhh--hhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHhCC
Confidence 653 222333444433433 44579999999999999999999999999999999887642 1222345677889
Q ss_pred cEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCC
Q 016820 256 IDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTS 332 (382)
Q Consensus 256 v~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~ 332 (382)
|+++.++++.+++.++++ ..+.+.+...++..++++|.|++|+|++|+..++ . .++.++++|++.||+ .++|+
T Consensus 254 V~v~~~~~v~~i~~~~~~---~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~t~ 329 (491)
T 3urh_A 254 IDFKLGAKVTGAVKSGDG---AKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDR-HFQTS 329 (491)
T ss_dssp CEEECSEEEEEEEEETTE---EEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCT-TCBCS
T ss_pred CEEEECCeEEEEEEeCCE---EEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECC-CCCCC
Confidence 999999999999987763 2355554222444689999999999999999864 2 578888999999998 78899
Q ss_pred CCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 333 VPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 333 ~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
.|+|||+|||++. ++.+..|..||+.+|.+|..
T Consensus 330 ~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 330 IAGVYAIGDVVRG-PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp STTEEECGGGSSS-CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEecCCC-ccchhHHHHHHHHHHHHHcC
Confidence 9999999999964 58899999999999999874
No 25
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=5.4e-36 Score=290.83 Aligned_cols=299 Identities=18% Similarity=0.174 Sum_probs=217.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccC----CCCCCCcceecCCCc------------------ccC--CC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMA----NDIAPGGQLTTTSDV------------------ENF--PG 112 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~----~~~~~gg~~~~~~~~------------------~~~--~~ 112 (382)
.++||+|||||++|+++|..|+++|.+|+|||+... .....||.|....+. ..+ ..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 468999999999999999999999999999995211 134678876533211 011 00
Q ss_pred -CCCCCChHHHHHHH-----------HHHHHHcCcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcCC
Q 016820 113 -FPQGILGGDLMDRC-----------RNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 113 -~~~~~~~~~~~~~~-----------~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~~ 177 (382)
.+.......+.++. ...+++.+++++.+++..++ .+.+.+.+++ .++.||+||+|||++|+.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~--~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p 162 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVD--EHTVRGVDKGGKATLLSAEHIVIATGGRPRYP 162 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESS--SSEEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcc--CCeEEEEeCCCceEEEECCEEEEcCCCCCCCC
Confidence 01234444444443 23345678999888877665 3455665543 3699999999999999999
Q ss_pred C-CCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc----hHHHHHHhcc
Q 016820 178 Q-FPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA----SKIMQNRALT 252 (382)
Q Consensus 178 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~----~~~~~~~~l~ 252 (382)
+ +||.+.... .+...... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+...++. ......+.++
T Consensus 163 ~~i~G~~~~~~----~~~~~~~~--~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~ 236 (488)
T 3dgz_A 163 TQVKGALEYGI----TSDDIFWL--KESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHME 236 (488)
T ss_dssp SSCBTHHHHCB----CHHHHTTC--SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCcccccC----cHHHHHhh--hhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccccCCHHHHHHHHHHHH
Confidence 8 999754211 11111222 33578999999999999999999999999999998764432 1222345677
Q ss_pred CCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc---cccccc-CCCceeeCCCC
Q 016820 253 NPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD---GQLDLH-SDGYIITKPGT 328 (382)
Q Consensus 253 ~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~---~~~~~~-~~g~i~vd~~~ 328 (382)
+.||++++++.+.++...+++. ..+.+.+...++..++++|.|++++|++|++.++. .++.++ ++|++.||+ +
T Consensus 237 ~~gv~~~~~~~v~~i~~~~~~~--~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~-~ 313 (488)
T 3dgz_A 237 SHGTQFLKGCVPSHIKKLPTNQ--LQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDA-Q 313 (488)
T ss_dssp HTTCEEEETEEEEEEEECTTSC--EEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCT-T
T ss_pred HCCCEEEeCCEEEEEEEcCCCc--EEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECC-C
Confidence 8999999999999998855442 22445442224334689999999999999998742 577888 789999998 7
Q ss_pred CcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 329 THTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 329 ~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
++|+.|||||+|||+...+..++.|..||+.+|.+|..
T Consensus 314 ~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 314 EATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp SBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcC
Confidence 88999999999999854567889999999999999873
No 26
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1e-35 Score=286.64 Aligned_cols=289 Identities=21% Similarity=0.239 Sum_probs=213.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc---------------cCC--CCC---CCC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE---------------NFP--GFP---QGI 117 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~---------------~~~--~~~---~~~ 117 (382)
++||+|||||++|+++|..|++.|++|+|||+ . ..||.+....... .+. +.+ ...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~----~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 77 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEK----G-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTI 77 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEES----S-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEC----C-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCcc
Confidence 47999999999999999999999999999995 3 4666553221100 000 110 011
Q ss_pred ChHH-----------HHHHHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECCe--EEEcCEEEEccCCCCcCCCCCCCcc
Q 016820 118 LGGD-----------LMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSK--SVLADTVIVATGAVAKKLQFPGSDA 184 (382)
Q Consensus 118 ~~~~-----------~~~~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~--~~~~d~lvlA~G~~~~~~~~~g~~~ 184 (382)
.... +.+.+.+.+++.+++++.+++..++ .+.+.+.+.++ ++.||+||+|||++|..|+++|.+.
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id--~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~ 155 (455)
T 1ebd_A 78 DFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVD--ANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSN 155 (455)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEE--TTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcc--CCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccc
Confidence 2222 2333456667789999999766655 45677766544 6999999999999999888888653
Q ss_pred ccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEEE
Q 016820 185 FWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDVI 259 (382)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~~ 259 (382)
. +......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||+++
T Consensus 156 ~----v~~~~~~~~~--~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 229 (455)
T 1ebd_A 156 R----ILDSTGALNL--GEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVV 229 (455)
T ss_dssp S----EECHHHHHTC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred e----EecHHHHhcc--ccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 1 1111111112 23478999999999999999999999999999999887632 11223456777899999
Q ss_pred cCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCCCce
Q 016820 260 WNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSVPGV 336 (382)
Q Consensus 260 ~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~~~v 336 (382)
.++++.+++.++++ ..+.+.. .+++.++++|.+++++|++|++.++ + .++.++++|++.||+ +++|+.|+|
T Consensus 230 ~~~~v~~i~~~~~~---~~v~~~~--~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~-~~~t~~~~I 303 (455)
T 1ebd_A 230 TNALAKGAEEREDG---VTVTYEA--NGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQ-QCRTSVPNI 303 (455)
T ss_dssp ESEEEEEEEEETTE---EEEEEEE--TTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCT-TCBCSSTTE
T ss_pred eCCEEEEEEEeCCe---EEEEEEe--CCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCC-CcccCCCCE
Confidence 99999999987653 1233332 2345789999999999999999873 3 467788889999999 688999999
Q ss_pred EEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 337 FAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 337 ya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
||+|||++. ++.++.|..||+.+|.+|..
T Consensus 304 ya~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 304 FAIGDIVPG-PALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp EECGGGSSS-CCCHHHHHHHHHHHHHHHTS
T ss_pred EEEeccCCC-cccHHHHHHHHHHHHHHHcC
Confidence 999999974 57888999999999999974
No 27
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=3.6e-37 Score=298.67 Aligned_cols=295 Identities=16% Similarity=0.140 Sum_probs=206.9
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHH--HHc
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQS--LRF 133 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 133 (382)
..+++|||||||+||+++|..|++.+++|+|||++.. ..+....+... -..++..++...++... .+.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~--------~~~~PlL~~va--~G~l~~~~i~~p~~~~~~~~~~ 109 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY--------FLFTPLLPSAP--VGTVDEKSIIEPIVNFALKKKG 109 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE--------EECGGGGGGTT--TTSSCGGGGEEEHHHHHTTCSS
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC--------cccccchhHHh--hccccHHHhhhhHHHHHHhhcC
Confidence 3457899999999999999999999999999996311 00000000000 01122333333333333 345
Q ss_pred CcEEEEeeEEEEEecCCcEEEEE-------------------CCeEEEcCEEEEccCCCCcCCCCCCCcc--ccCCCcce
Q 016820 134 GTQIFTETVSKVDFKSRPFKVFT-------------------DSKSVLADTVIVATGAVAKKLQFPGSDA--FWNRGISA 192 (382)
Q Consensus 134 gi~~~~~~v~~i~~~~~~~~v~~-------------------~~~~~~~d~lvlA~G~~~~~~~~~g~~~--~~~~~~~~ 192 (382)
+++++.++|++||++++.+++.. ++.++.||+||+|||+.|+.+++||.++ +..+++.+
T Consensus 110 ~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~d 189 (502)
T 4g6h_A 110 NVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPN 189 (502)
T ss_dssp CEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHH
T ss_pred CeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHH
Confidence 79999999999999998887653 3457999999999999999999999765 22233222
Q ss_pred eeecc--------------CCC-CCCCCCcEEEEcCCchHHHHHHHHhhcC--------------CEEEEEEeCCCCcc-
Q 016820 193 CAVCD--------------GAA-PIFRDKPLAVIGGGDSAMEEANFLTKYG--------------SKVYIIHRRDSFRA- 242 (382)
Q Consensus 193 ~~~~~--------------~~~-~~~~~~~v~VvG~G~~a~e~a~~l~~~g--------------~~v~~~~~~~~~~~- 242 (382)
..... ... ......+++|||+|++|+|+|..|.+++ .+|++++..+.+..
T Consensus 190 A~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~ 269 (502)
T 4g6h_A 190 SLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM 269 (502)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT
T ss_pred HHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC
Confidence 11100 000 0011247999999999999999887542 68999999987632
Q ss_pred ----hHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEec-cCC--ceEEEecCeEEEeeCCCCChhhhc----
Q 016820 243 ----SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNL-VTG--QVSDLKVSGLFFAIGHEPATKFVD---- 311 (382)
Q Consensus 243 ----~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~-~~~--~~~~~~~D~vi~~~G~~p~~~~~~---- 311 (382)
.....++.|++.||++++++++.+++++. +.+... .++ .+.++++|.+|||+|.+|++....
T Consensus 270 ~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~-------~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~ 342 (502)
T 4g6h_A 270 FEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQ-------LLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKK 342 (502)
T ss_dssp SCHHHHHHHHHHHHHTTCEEETTEEEEEECSSE-------EEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcceeeecCceEEEEeCCc-------eEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHh
Confidence 12233567888999999999999998765 333321 112 235799999999999999853222
Q ss_pred ccccccCCCceeeCCCCCcCCCCceEEecccCCc-hhhHHHHHHhhHHHHHHHHHHH
Q 016820 312 GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK-KYRQAVTAAGTGCMAALEAEHY 367 (382)
Q Consensus 312 ~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~-~~~~~~~a~~~g~~aa~~i~~~ 367 (382)
.+...+.+|+|.||++++.+++|||||+|||+.. .++.+..|++||..+|+||.+.
T Consensus 343 ~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 343 IPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp SGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 3455678899999994444489999999999853 3788999999999999999763
No 28
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=3.3e-36 Score=290.67 Aligned_cols=291 Identities=23% Similarity=0.231 Sum_probs=214.1
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc---------------cCCCCCCCCChHHH
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE---------------NFPGFPQGILGGDL 122 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~---------------~~~~~~~~~~~~~~ 122 (382)
.+||+|||||++|+++|..|++.|++|+||| +....||.|....+.. .++..+.......+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liE----k~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~ 79 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMAD----PKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTV 79 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----TTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEE----CCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHH
Confidence 5899999999999999999999999999999 4557888766432211 00111122333333
Q ss_pred H------------HHHHHHHHHcCcEEEEeeEEEEEecCCcEEEEEC-CeE--EEcCEEEEccCCCCcCCCCCCCccccC
Q 016820 123 M------------DRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTD-SKS--VLADTVIVATGAVAKKLQFPGSDAFWN 187 (382)
Q Consensus 123 ~------------~~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~-~~~--~~~d~lvlA~G~~~~~~~~~g~~~~~~ 187 (382)
. ..+...+++.+++++.+++..++. +.+.+.++ +.. +.||+||+|||++|+.|++||.+.++.
T Consensus 80 ~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~--~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~t 157 (466)
T 3l8k_A 80 QDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDP--THVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLT 157 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEET--TEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGGGSBC
T ss_pred HHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecC--CeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCccceEe
Confidence 3 334444456799999888888874 45666654 345 899999999999999999999773211
Q ss_pred CCcceee-eccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---hHHHHHHhccCCCcEEEcCce
Q 016820 188 RGISACA-VCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---SKIMQNRALTNPKIDVIWNSV 263 (382)
Q Consensus 188 ~~~~~~~-~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---~~~~~~~~l~~~gv~~~~~~~ 263 (382)
..... +.... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+.+.. ...+.+.+.+...|+++.+++
T Consensus 158 --~~~~~~~~~~l--~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~v~i~~~~~ 233 (466)
T 3l8k_A 158 --SDDIFGYKTSF--RKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILKLNIKFNSP 233 (466)
T ss_dssp --HHHHHSTTCSC--CSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHCCCEECSCC
T ss_pred --HHHHHHHHHHH--hhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCEEEEEECCE
Confidence 11111 11122 33578999999999999999999999999999999887642 223322222222299999999
Q ss_pred eEEEEecC-CceeeeeEEEEecc-CCceEEEecCeEEEeeCCCCChhh-h-cccccccCCCceeeCCCCCcCCCCceEEe
Q 016820 264 VLEAYGEG-DKKVLGGLKVKNLV-TGQVSDLKVSGLFFAIGHEPATKF-V-DGQLDLHSDGYIITKPGTTHTSVPGVFAA 339 (382)
Q Consensus 264 v~~i~~~~-~g~~~~~v~~~~~~-~~~~~~~~~D~vi~~~G~~p~~~~-~-~~~~~~~~~g~i~vd~~~~~t~~~~vya~ 339 (382)
+.+++.++ ++ +.+.... +++..++++|.+++++|++|++.+ + ..++.++++| +.||+ +++|+.|||||+
T Consensus 234 v~~i~~~~~~~-----v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~-~~~t~~~~Iya~ 306 (466)
T 3l8k_A 234 VTEVKKIKDDE-----YEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDE-TMKTNIPNVFAT 306 (466)
T ss_dssp EEEEEEEETTE-----EEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCT-TCBCSSTTEEEC
T ss_pred EEEEEEcCCCc-----EEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECC-CccCCCCCEEEE
Confidence 99999866 43 3333311 244457999999999999999983 2 3578888899 99998 889999999999
Q ss_pred cccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 340 GDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 340 GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|||++. ++.+..|+.||+.+|.+|..
T Consensus 307 GD~~~~-~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 307 GDANGL-APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp GGGTCS-CCSHHHHHHHHHHHHHHHHT
T ss_pred EecCCC-CccHhHHHHHHHHHHHHHhC
Confidence 999975 68899999999999999974
No 29
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=6.6e-36 Score=289.94 Aligned_cols=297 Identities=19% Similarity=0.163 Sum_probs=218.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEeccc-----CCCCCCCcceecCCCcc------------------cC--C
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWM-----ANDIAPGGQLTTTSDVE------------------NF--P 111 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~-----~~~~~~gg~~~~~~~~~------------------~~--~ 111 (382)
..+||+|||||++|+++|..|+++|++|+|||+.. ......||.|....+.+ .+ .
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 46899999999999999999999999999999421 11224788775432111 11 1
Q ss_pred C-CCCCCChHHHHHHHHH-----------HHHHcCcEEEEeeEEEEEecCCcEEEEECCe--EEEcCEEEEccCCCCcCC
Q 016820 112 G-FPQGILGGDLMDRCRN-----------QSLRFGTQIFTETVSKVDFKSRPFKVFTDSK--SVLADTVIVATGAVAKKL 177 (382)
Q Consensus 112 ~-~~~~~~~~~~~~~~~~-----------~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~--~~~~d~lvlA~G~~~~~~ 177 (382)
. .+.......+.++..+ .+++.+++++.+.+..++ .+.+.+.++++ ++.||+||+|||++|+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~--~~~v~v~~~~g~~~~~~d~lviATGs~p~~p 165 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVD--SHTLLAKLKSGERTITAQTFVIAVGGRPRYP 165 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEE--TTEEEEECTTCCEEEEEEEEEECCCEEECCC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEcc--CCEEEEEeCCCeEEEEcCEEEEeCCCCcCCC
Confidence 0 0113345555444333 345568999988877666 34566655433 599999999999999999
Q ss_pred CCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc----hHHHHHHhccC
Q 016820 178 QFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA----SKIMQNRALTN 253 (382)
Q Consensus 178 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~----~~~~~~~~l~~ 253 (382)
++||.+.... .+...... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+...++. ......+.+++
T Consensus 166 ~i~G~~~~~~----~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~ 239 (483)
T 3dgh_A 166 DIPGAVEYGI----TSDDLFSL--DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEE 239 (483)
T ss_dssp SSTTHHHHCB----CHHHHTTC--SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTTSCHHHHHHHHHHHHH
T ss_pred CCCCcccccC----cHHHHhhh--hhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcccCHHHHHHHHHHHHh
Confidence 9999754211 11111122 33478999999999999999999999999999998644322 12223466778
Q ss_pred CCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc---ccccccCCCceeeCCCCCc
Q 016820 254 PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD---GQLDLHSDGYIITKPGTTH 330 (382)
Q Consensus 254 ~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~---~~~~~~~~g~i~vd~~~~~ 330 (382)
.||++++++.+.+++.++++. ..+.+.+...++..++++|.|++++|++|++.++. .++.+++ |++.||+ .++
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~~~--~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~-~~~ 315 (483)
T 3dgh_A 240 RGIPFLRKTVPLSVEKQDDGK--LLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDS-QEA 315 (483)
T ss_dssp TTCCEEETEEEEEEEECTTSC--EEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCT-TCB
T ss_pred CCCEEEeCCEEEEEEEcCCCc--EEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECc-CCc
Confidence 999999999999999866542 23556553334456799999999999999998763 4678888 9999998 688
Q ss_pred CCCCceEEecccCCchhhHHHHHHhhHHHHHHHHH
Q 016820 331 TSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAE 365 (382)
Q Consensus 331 t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~ 365 (382)
|+.|+|||+|||+...++.++.|..||+.+|.+|.
T Consensus 316 t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 350 (483)
T 3dgh_A 316 TNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLY 350 (483)
T ss_dssp CSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHc
Confidence 99999999999985457889999999999999986
No 30
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=8e-36 Score=288.33 Aligned_cols=293 Identities=22% Similarity=0.258 Sum_probs=214.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCccc----------------C--CCCC----C
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVEN----------------F--PGFP----Q 115 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~----------------~--~~~~----~ 115 (382)
++||+|||||++|+++|..|++.|++|+||| +...+||.|........ + .+++ .
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie----~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~ 77 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVE----KRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGV 77 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEE----SSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEe----CCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 4799999999999999999999999999999 44457776542211000 0 0000 0
Q ss_pred CCChHHHH-----------HHHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcCCCCCC
Q 016820 116 GILGGDLM-----------DRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKLQFPG 181 (382)
Q Consensus 116 ~~~~~~~~-----------~~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~~~~~g 181 (382)
......+. ..+...+++.+++++.+++..++ .+.+.+.+++ .++.||+||+|||++|..|+++|
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~--~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g 155 (468)
T 2qae_A 78 TMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFET--AHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLP 155 (468)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEE--TTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee--CCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCC
Confidence 11223322 22345566789999999876665 4566776543 46999999999999999888888
Q ss_pred CccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhc-cCCC
Q 016820 182 SDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRAL-TNPK 255 (382)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l-~~~g 255 (382)
.+. ..+......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+ ++.|
T Consensus 156 ~~~---~~v~t~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~g 230 (468)
T 2qae_A 156 FDE---KVVLSSTGALAL--PRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEK 230 (468)
T ss_dssp CCS---SSEECHHHHHTC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTC
T ss_pred CCc---CceechHHHhhc--ccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCC
Confidence 653 112222222222 23578999999999999999999999999999999887642 122234567 7889
Q ss_pred cEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhh--hc-ccccccCCCceeeCCCCCcCC
Q 016820 256 IDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKF--VD-GQLDLHSDGYIITKPGTTHTS 332 (382)
Q Consensus 256 v~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~--~~-~~~~~~~~g~i~vd~~~~~t~ 332 (382)
|++++++++.+++.++++ ..+.+.. .+++..++++|.|++|+|++|++.+ ++ .++.++++|+|.||+ +++|+
T Consensus 231 v~i~~~~~v~~i~~~~~~---~~v~~~~-~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~-~~~t~ 305 (468)
T 2qae_A 231 MKFMTSTKVVGGTNNGDS---VSLEVEG-KNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGD-HFETS 305 (468)
T ss_dssp CEEECSCEEEEEEECSSS---EEEEEEC-C---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCT-TSBCS
T ss_pred cEEEeCCEEEEEEEcCCe---EEEEEEc-CCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECC-CcccC
Confidence 999999999999987653 1234431 1133367999999999999999987 33 467788889999998 68899
Q ss_pred CCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 333 VPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 333 ~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
.|+|||+|||++..++.++.|..||+.+|.+|..
T Consensus 306 ~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 306 IPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp STTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcC
Confidence 9999999999972357889999999999999974
No 31
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.4e-36 Score=290.64 Aligned_cols=289 Identities=23% Similarity=0.264 Sum_probs=216.3
Q ss_pred cccEEEECCcHHHHHHHHHHHHc---CCCeEEEecccCCCCCCCcceecCCCc---------------ccCC--CCC---
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARA---ELKPILFEGWMANDIAPGGQLTTTSDV---------------ENFP--GFP--- 114 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~---g~~v~lie~~~~~~~~~gg~~~~~~~~---------------~~~~--~~~--- 114 (382)
.+||+|||||++|+++|..|++. |++|+|||+ .. .||.+...... ..+. +++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~----~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~ 76 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDC----DG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDF 76 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEES----SC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC---
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeC----CC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 47999999999999999999999 999999995 33 67765432110 0111 111
Q ss_pred --CCCChHHHH-----------HHHHHHHHHcCcEEEEeeEEEEEec----CCcEEEEEC-Ce--EEEcCEEEEccCCCC
Q 016820 115 --QGILGGDLM-----------DRCRNQSLRFGTQIFTETVSKVDFK----SRPFKVFTD-SK--SVLADTVIVATGAVA 174 (382)
Q Consensus 115 --~~~~~~~~~-----------~~~~~~~~~~gi~~~~~~v~~i~~~----~~~~~v~~~-~~--~~~~d~lvlA~G~~~ 174 (382)
.......+. ..+.+.+++.+++++.+++..++.+ ++.+.+.++ +. .+.||+||+|||++|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 77 DDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp ---CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 012333333 3345666788999999988777762 245666553 33 699999999999999
Q ss_pred cCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHH
Q 016820 175 KKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNR 249 (382)
Q Consensus 175 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~ 249 (382)
..|+++|.+.. .+......... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+.+.. ......+
T Consensus 157 ~~p~i~g~~~~---~v~~~~~~~~~--~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~ 231 (499)
T 1xdi_A 157 RILPSAQPDGE---RILTWRQLYDL--DALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEE 231 (499)
T ss_dssp CCCGGGCCCSS---SEEEGGGGGGC--SSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHH
T ss_pred CCCCCCCCCcC---cEEehhHhhhh--hccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHH
Confidence 98888886542 11121111122 23468999999999999999999999999999999887632 1222345
Q ss_pred hccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhh--hc-ccccccCCCceeeCC
Q 016820 250 ALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKF--VD-GQLDLHSDGYIITKP 326 (382)
Q Consensus 250 ~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~--~~-~~~~~~~~g~i~vd~ 326 (382)
.+++.||++++++++.+++.++++ +.+.. +++.++++|.|++++|.+|+..+ ++ .++.++++|+|.||+
T Consensus 232 ~l~~~GV~i~~~~~V~~i~~~~~~-----v~v~~---~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 303 (499)
T 1xdi_A 232 SFAERGVRLFKNARAASVTRTGAG-----VLVTM---TDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDR 303 (499)
T ss_dssp HHHHTTCEEETTCCEEEEEECSSS-----EEEEE---TTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCS
T ss_pred HHHHCCCEEEeCCEEEEEEEeCCE-----EEEEE---CCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECC
Confidence 677889999999999999987653 44544 33457999999999999999987 43 477888889999998
Q ss_pred CCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 327 GTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 327 ~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
.++|+.|+|||+|||++. +..+..|+.||+.+|.+|..
T Consensus 304 -~~~t~~~~IyA~GD~~~~-~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 304 -VSRTLATGIYAAGDCTGL-LPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp -SSBCSSTTEEECSGGGTS-CSCHHHHHHHHHHHHHHHTT
T ss_pred -CcccCCCCEEEEeccCCC-cccHHHHHHHHHHHHHHhcC
Confidence 688999999999999974 56788999999999999973
No 32
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.8e-35 Score=288.76 Aligned_cols=299 Identities=17% Similarity=0.174 Sum_probs=214.0
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEeccc----CCCCCCCcceecCCCcc------------------cC--C
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWM----ANDIAPGGQLTTTSDVE------------------NF--P 111 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~----~~~~~~gg~~~~~~~~~------------------~~--~ 111 (382)
+.++||+|||||++|+.+|..|+++|.+|+|||+.. ......||.|....+.+ .+ .
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 356899999999999999999999999999999632 11226788765332110 01 0
Q ss_pred C-CCCCCChHHHHHHHH-----------HHHHHcCcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcC
Q 016820 112 G-FPQGILGGDLMDRCR-----------NQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 112 ~-~~~~~~~~~~~~~~~-----------~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~ 176 (382)
. .+.......+.++.+ ..+++.+++++.+++..+++. .+.+.+.+ .++.||+||+|||++|+.
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~--~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPH--RIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETT--EEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC--EEEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 0 111334444444433 234567999999988887743 55665533 269999999999999999
Q ss_pred CCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc----hHHHHHHhcc
Q 016820 177 LQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA----SKIMQNRALT 252 (382)
Q Consensus 177 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~----~~~~~~~~l~ 252 (382)
|++||.+.+... ....... ...+++++|||+|.+|+|+|..|.++|.+|+++.+...++. ......+.++
T Consensus 188 p~i~G~~~~~~t----~~~~~~l--~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~~~~~~~~~~l~ 261 (519)
T 3qfa_A 188 LGIPGDKEYCIS----SDDLFSL--PYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHME 261 (519)
T ss_dssp CCCTTHHHHCBC----HHHHTTC--SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCccCceEc----HHHHhhh--hhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccccCCHHHHHHHHHHHH
Confidence 999996542111 1111112 33467899999999999999999999999999998643322 1222245677
Q ss_pred CCCcEEEcCceeEEEEecCC---ceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-cccccc-CCCceeeC
Q 016820 253 NPKIDVIWNSVVLEAYGEGD---KKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLH-SDGYIITK 325 (382)
Q Consensus 253 ~~gv~~~~~~~v~~i~~~~~---g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~-~~g~i~vd 325 (382)
+.||+++++..+.++....+ +. ..+.+.....++..++++|.|++++|++|++..+ . .++.++ ++|++.||
T Consensus 262 ~~GV~v~~~~~v~~v~~~~~~~~~~--~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd 339 (519)
T 3qfa_A 262 EHGIKFIRQFVPIKVEQIEAGTPGR--LRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVT 339 (519)
T ss_dssp HTTCEEEESEEEEEEEEEECCTTCE--EEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCC
T ss_pred HCCCEEEeCCeEEEEEEccCCCCce--EEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeC
Confidence 89999999988888876432 21 1233333222222568999999999999999864 2 467787 58999999
Q ss_pred CCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHH
Q 016820 326 PGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAE 365 (382)
Q Consensus 326 ~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~ 365 (382)
+ +++|+.|||||+|||+...++.+..|..||+.+|.+|.
T Consensus 340 ~-~~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~ 378 (519)
T 3qfa_A 340 D-EEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY 378 (519)
T ss_dssp T-TSBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHH
T ss_pred C-CCccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHc
Confidence 8 78899999999999984457889999999999999987
No 33
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.3e-35 Score=274.69 Aligned_cols=291 Identities=19% Similarity=0.193 Sum_probs=211.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC-CeEEEecccCCCCCCCcceecCCCcc---------cCCCC--------------
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL-KPILFEGWMANDIAPGGQLTTTSDVE---------NFPGF-------------- 113 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie~~~~~~~~~gg~~~~~~~~~---------~~~~~-------------- 113 (382)
.+||+|||||++|+++|..|++.|+ +|+|||+. . +|+.|....... ...++
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~----~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 78 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKG----T-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAF 78 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSS----S-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecC----C-CCCccccCcccccccCcchhcccCCchhhhhccccccccc
Confidence 5799999999999999999999999 99999953 2 555443211000 00000
Q ss_pred ---CCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccccCCC
Q 016820 114 ---PQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRG 189 (382)
Q Consensus 114 ---~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~ 189 (382)
...+...++.+++.+.++++|++++.+ +|.+++.+++.+.+.++++++.||+||+|+|..+. |.+|+ . ..
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~-p~ip~-~----~~ 152 (369)
T 3d1c_A 79 TFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDYNF-PKKPF-K----YG 152 (369)
T ss_dssp HHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEEECCCSTTS-BCCCS-S----SC
T ss_pred cccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEEECCCCCCc-cCCCC-C----ce
Confidence 112345778889999999999999888 69999988778888877778999999999999865 55665 1 22
Q ss_pred cceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---------h---HHHHHHhccCCC-c
Q 016820 190 ISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---------S---KIMQNRALTNPK-I 256 (382)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---------~---~~~~~~~l~~~g-v 256 (382)
.+...+.... ...+++|+|||+|.+|+|+|..|.+.+.+|+++++.+.+.. . ....++.+++.| |
T Consensus 153 ~~~~~~~~~~--~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v 230 (369)
T 3d1c_A 153 IHYSEIEDFD--NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARI 230 (369)
T ss_dssp EEGGGCSCGG--GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCE
T ss_pred echhhcCChh--hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcE
Confidence 2222222221 33568999999999999999999999999999999876541 1 123345677786 9
Q ss_pred EEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCc
Q 016820 257 DVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPG 335 (382)
Q Consensus 257 ~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~ 335 (382)
+++.+..+.+++.++++ ..+.+.+ ++ ....+|.+++++|++|+..++. ..+. +++|++.||+.+++|++|+
T Consensus 231 ~~~~~~~v~~i~~~~~~---~~v~~~~---g~-~~~~~d~vi~a~G~~~~~~~~~~~~~~-~~~g~i~v~~~~~~t~~~~ 302 (369)
T 3d1c_A 231 EMNVHYTVKDIDFNNGQ---YHISFDS---GQ-SVHTPHEPILATGFDATKNPIVQQLFV-TTNQDIKLTTHDESTRYPN 302 (369)
T ss_dssp EEECSCCEEEEEEETTE---EEEEESS---SC-CEEESSCCEECCCBCGGGSHHHHHHSC-CTTSCCCBCTTSBBSSSTT
T ss_pred EEecCcEEEEEEecCCc---eEEEecC---Ce-EeccCCceEEeeccCCccchhhhhhcc-CCCCCEEechhhcccCCCC
Confidence 99999999999865542 1233332 32 2235699999999999996554 3455 7789999999778999999
Q ss_pred eEEecccCCch---hhHHHHHHhhHHHHHHHHHHHHH
Q 016820 336 VFAAGDVQDKK---YRQAVTAAGTGCMAALEAEHYLQ 369 (382)
Q Consensus 336 vya~GD~~~~~---~~~~~~a~~~g~~aa~~i~~~l~ 369 (382)
||++|||+... ...+..+.+||+.+|.+|...+.
T Consensus 303 v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 303 IFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREG 339 (369)
T ss_dssp EEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTT
T ss_pred eEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccC
Confidence 99999998632 22345678899999999987664
No 34
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.3e-35 Score=286.16 Aligned_cols=285 Identities=20% Similarity=0.246 Sum_probs=209.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCc------------------c--cCCCCCCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDV------------------E--NFPGFPQG 116 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~------------------~--~~~~~~~~ 116 (382)
.++||+|||||++|+++|..|++.|++|+|||+ . ..||.|....+. . .+......
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~----~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~ 77 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIES----K-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGT 77 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEES----S-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcC----C-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCC
Confidence 358999999999999999999999999999995 3 467765422100 0 01100012
Q ss_pred CChHHHHHH-----------HHHHHHHcCcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccc
Q 016820 117 ILGGDLMDR-----------CRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAF 185 (382)
Q Consensus 117 ~~~~~~~~~-----------~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~ 185 (382)
.....+.++ +...+.+.+++++.+++..++. +.+.+ ++.++.||+||+|||++|..|++||.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~--~g~~~~~d~lviAtGs~p~~p~i~G~~~~ 153 (463)
T 2r9z_A 78 LDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDA--HTIEV--EGQRLSADHIVIATGGRPIVPRLPGAELG 153 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEE--TTEEEEEEEEEECCCEEECCCSCTTGGGS
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccC--CEEEE--CCEEEEcCEEEECCCCCCCCCCCCCccce
Confidence 333433333 3334466799999998777763 33443 66779999999999999999999987421
Q ss_pred cCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEEEc
Q 016820 186 WNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDVIW 260 (382)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~~~ 260 (382)
. .+...... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||+++.
T Consensus 154 ~-----~~~~~~~~--~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 226 (463)
T 2r9z_A 154 I-----TSDGFFAL--QQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHL 226 (463)
T ss_dssp B-----CHHHHHHC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEES
T ss_pred e-----cHHHHhhh--hccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 1 11111111 22468999999999999999999999999999999876531 112234567788999999
Q ss_pred CceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCCCceE
Q 016820 261 NSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSVPGVF 337 (382)
Q Consensus 261 ~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~~~vy 337 (382)
++++.+++.++++ +.+.. .+++. ++++|.|++|+|++|+...+ . .++.++++|++.||+ +++|+.||||
T Consensus 227 ~~~v~~i~~~~~~-----~~v~~-~~G~~-~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~-~~~t~~~~Iy 298 (463)
T 2r9z_A 227 EFAVAALERDAQG-----TTLVA-QDGTR-LEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDA-YQNTNVPGVY 298 (463)
T ss_dssp SCCEEEEEEETTE-----EEEEE-TTCCE-EEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCT-TSBCSSTTEE
T ss_pred CCEEEEEEEeCCe-----EEEEE-eCCcE-EEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECC-CCccCCCCEE
Confidence 9999999987653 33333 12321 79999999999999999743 2 478888899999998 6789999999
Q ss_pred EecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 338 AAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 338 a~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|+|||++. +..+..|..||+.+|.+|..
T Consensus 299 a~GD~~~~-~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 299 ALGDITGR-DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp ECGGGGTS-CCCHHHHHHHHHHHHHHHHS
T ss_pred EEeecCCC-cccHHHHHHHHHHHHHHHcC
Confidence 99999864 56888999999999999863
No 35
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=2.2e-35 Score=286.09 Aligned_cols=294 Identities=21% Similarity=0.227 Sum_probs=211.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc----------------cCC--CCC----
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE----------------NFP--GFP---- 114 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~----------------~~~--~~~---- 114 (382)
..+||+|||||++|+++|..|++.|++|+|||+ ....||.+....... .+. +++
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~----~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~ 79 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEK----RGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGD 79 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES----SSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEec----CCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 358999999999999999999999999999994 345666543211000 000 110
Q ss_pred CCCChHHHHH-----------HHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECC---eE------EEcCEEEEccCCCC
Q 016820 115 QGILGGDLMD-----------RCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KS------VLADTVIVATGAVA 174 (382)
Q Consensus 115 ~~~~~~~~~~-----------~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~------~~~d~lvlA~G~~~ 174 (382)
......++.. .+.+.+++.+++++.++...+ +.+.+.+.+.+ .+ +.||+||+|||++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 80 IKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE--DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES--SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc--cCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 0122333322 244556678999999865443 45567776533 35 99999999999988
Q ss_pred cCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHH
Q 016820 175 KKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNR 249 (382)
Q Consensus 175 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~ 249 (382)
. .+||.+. ....+..+...... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+
T Consensus 158 ~--~~~g~~~-~~~~v~~~~~~~~~--~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~ 232 (478)
T 1v59_A 158 T--PFPGIEI-DEEKIVSSTGALSL--KEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQK 232 (478)
T ss_dssp C--CCTTCCC-CSSSEECHHHHTTC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHH
T ss_pred C--CCCCCCC-CCceEEcHHHHHhh--hccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHH
Confidence 4 3555432 11122222222222 22479999999999999999999999999999999887632 1222345
Q ss_pred hccCCCcEEEcCceeEEEEe--cCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChh--hhc-ccccccCCCceee
Q 016820 250 ALTNPKIDVIWNSVVLEAYG--EGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATK--FVD-GQLDLHSDGYIIT 324 (382)
Q Consensus 250 ~l~~~gv~~~~~~~v~~i~~--~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~--~~~-~~~~~~~~g~i~v 324 (382)
.+++.||++++++++.++.. +++ ...+.+.+..++++..+++|.|++++|.+|++. ++. .++.++++|+|.|
T Consensus 233 ~l~~~gv~i~~~~~v~~i~~~~~~~---~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~v 309 (478)
T 1v59_A 233 FLKKQGLDFKLSTKVISAKRNDDKN---VVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVI 309 (478)
T ss_dssp HHHHTTCEEECSEEEEEEEEETTTT---EEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCC
T ss_pred HHHHCCCEEEeCCEEEEEEEecCCC---eEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeE
Confidence 67788999999999999987 443 223555432234557899999999999999997 444 5778888999999
Q ss_pred CCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 325 KPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 325 d~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|+ .++|+.|+|||+|||+.. ++.++.|..||+.+|.+|..
T Consensus 310 d~-~~~t~~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 310 DD-QFNSKFPHIKVVGDVTFG-PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp CT-TSBCSSTTEEECGGGSSS-CCCHHHHHHHHHHHHHHHHH
T ss_pred Cc-CCccCCCCEEEeeccCCC-cccHHHHHHHHHHHHHHHcC
Confidence 98 688999999999999974 57888999999999999975
No 36
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.5e-35 Score=287.72 Aligned_cols=290 Identities=20% Similarity=0.205 Sum_probs=212.9
Q ss_pred cccEEEECCcHHHHHHHHHHHH-cCCCeEEEec----ccCCCCCCCcceecCCCcc---------------cCC--CCCC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAAR-AELKPILFEG----WMANDIAPGGQLTTTSDVE---------------NFP--GFPQ 115 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~-~g~~v~lie~----~~~~~~~~gg~~~~~~~~~---------------~~~--~~~~ 115 (382)
.+||+|||||++|+++|..|++ .|++|+|||+ ...+....||.|....+.+ ..+ ++..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5899999999999999999999 9999999992 1111235788765322110 000 1110
Q ss_pred -----CCChHHHHHHH-----------HHHHHHc-CcEEEEeeEEEEEecCCcEEEEE--C-----CeEEEcCEEEEccC
Q 016820 116 -----GILGGDLMDRC-----------RNQSLRF-GTQIFTETVSKVDFKSRPFKVFT--D-----SKSVLADTVIVATG 171 (382)
Q Consensus 116 -----~~~~~~~~~~~-----------~~~~~~~-gi~~~~~~v~~i~~~~~~~~v~~--~-----~~~~~~d~lvlA~G 171 (382)
.....++.++. ...+++. +++++.+++..++ .+.+.+.. + +..+.||+||+|||
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~--~~~v~v~~~~~~~~~~~~~~~~d~lViATG 164 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLES--KNVVVVRETADPKSAVKERLQADHILLATG 164 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEE--TTEEEEESSSSTTSCEEEEEEEEEEEECCC
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEee--CCEEEEeecCCccCCCCeEEEcCEEEEeCC
Confidence 22344444433 3334567 9999999887776 34455541 2 45699999999999
Q ss_pred CCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhc---CCEEEEEEeCCCCcc-----h
Q 016820 172 AVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKY---GSKVYIIHRRDSFRA-----S 243 (382)
Q Consensus 172 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---g~~v~~~~~~~~~~~-----~ 243 (382)
++|+.|++||.+.. ..+...... ...+++++|||+|.+|+|+|..|.++ |.+|+++++.+.+.. .
T Consensus 165 s~p~~p~i~G~~~~-----~~~~~~~~~--~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~ 237 (495)
T 2wpf_A 165 SWPQMPAIPGIEHC-----ISSNEAFYL--PEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETI 237 (495)
T ss_dssp EEECCCCCTTGGGC-----EEHHHHTTC--SSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHH
T ss_pred CCcCCCCCCCcccc-----ccHHHHHhh--hhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHH
Confidence 99999999987431 111111122 23478999999999999999999999 999999999887532 1
Q ss_pred HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCC
Q 016820 244 KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDG 320 (382)
Q Consensus 244 ~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g 320 (382)
.....+.+++.||++++++++.+++.++++. ..+.+.+ + .++++|.|++++|++|++..+ + .++.++++|
T Consensus 238 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~--~~v~~~~---G--~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G 310 (495)
T 2wpf_A 238 REEVTKQLTANGIEIMTNENPAKVSLNTDGS--KHVTFES---G--KTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKG 310 (495)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEECTTSC--EEEEETT---S--CEEEESEEEECSCEEECCGGGTGGGTTCCBCTTS
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCce--EEEEECC---C--cEEEcCEEEECCCCcccccccchhhcCccCCCCC
Confidence 2223456778899999999999999875431 1233322 3 479999999999999999743 3 577888899
Q ss_pred ceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHH
Q 016820 321 YIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAE 365 (382)
Q Consensus 321 ~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~ 365 (382)
+|.||+ +++|+.|+|||+|||++. ++.+..|+.||+.+|.+|.
T Consensus 311 ~i~Vd~-~~~t~~~~IyA~GD~~~~-~~l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 311 GVQVDE-FSRTNVPNIYAIGDITDR-LMLTPVAINEGAALVDTVF 353 (495)
T ss_dssp SBCCCT-TCBCSSTTEEECGGGGCS-CCCHHHHHHHHHHHHHHHH
T ss_pred CEEECC-CCccCCCCEEEEeccCCC-ccCHHHHHHHHHHHHHHhc
Confidence 999998 788999999999999973 5788999999999999986
No 37
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.7e-35 Score=287.10 Aligned_cols=291 Identities=18% Similarity=0.181 Sum_probs=213.9
Q ss_pred cccEEEECCcHHHHHHHHHHHH-cCCCeEEEecc----cCCCCCCCcceecCCCcc---------------cCC--CCCC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAAR-AELKPILFEGW----MANDIAPGGQLTTTSDVE---------------NFP--GFPQ 115 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~-~g~~v~lie~~----~~~~~~~gg~~~~~~~~~---------------~~~--~~~~ 115 (382)
++||+|||||++|+++|+.|++ .|++|+|||+. ..+....||.|....+.+ ... ++..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5899999999999999999999 99999999920 011235677764322110 000 1100
Q ss_pred -----CCChHHHHH-----------HHHHHHHHc-CcEEEEeeEEEEEecCCcEEEEE----CC---eEEEcCEEEEccC
Q 016820 116 -----GILGGDLMD-----------RCRNQSLRF-GTQIFTETVSKVDFKSRPFKVFT----DS---KSVLADTVIVATG 171 (382)
Q Consensus 116 -----~~~~~~~~~-----------~~~~~~~~~-gi~~~~~~v~~i~~~~~~~~v~~----~~---~~~~~d~lvlA~G 171 (382)
.....++.+ .+.+.+++. +++++.+++..++. +.+.+.. ++ ..+.||+||+|||
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~lviAtG 160 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDN--HTVLVRESADPNSAVLETLDTEYILLATG 160 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEECCC
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeC--CEEEEEeeccCCCCceEEEEcCEEEEeCC
Confidence 123333333 333445667 99999998888763 4566653 44 5699999999999
Q ss_pred CCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhc---CCEEEEEEeCCCCcc-----h
Q 016820 172 AVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKY---GSKVYIIHRRDSFRA-----S 243 (382)
Q Consensus 172 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---g~~v~~~~~~~~~~~-----~ 243 (382)
++|..|++||.+... .+...... ...+++++|||+|.+|+|+|..|.++ |.+|+++++.+.+.. .
T Consensus 161 s~p~~p~i~g~~~~~-----~~~~~~~~--~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~ 233 (490)
T 1fec_A 161 SWPQHLGIEGDDLCI-----TSNEAFYL--DEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSEL 233 (490)
T ss_dssp EEECCCCSBTGGGCB-----CHHHHTTC--SSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHH
T ss_pred CCCCCCCCCCcccee-----cHHHHhhh--hhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHH
Confidence 999999998874321 11111112 23478999999999999999999999 999999999987532 1
Q ss_pred HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCC
Q 016820 244 KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDG 320 (382)
Q Consensus 244 ~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g 320 (382)
.....+.+++.||++++++++.+++.++++. +.+.. .++.++++|.|++++|++|++..+ . .++.++++|
T Consensus 234 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~----~~v~~---~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G 306 (490)
T 1fec_A 234 RKQLTEQLRANGINVRTHENPAKVTKNADGT----RHVVF---ESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNG 306 (490)
T ss_dssp HHHHHHHHHHTTEEEEETCCEEEEEECTTSC----EEEEE---TTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTS
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE----EEEEE---CCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCC
Confidence 2223456778899999999999999875432 33332 122479999999999999999743 3 578888899
Q ss_pred ceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 321 YIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 321 ~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
+|.||+ +++|+.|+|||+|||++. ++.+..|+.||+.+|.+|..
T Consensus 307 ~I~Vd~-~~~t~~~~IyA~GD~~~~-~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 307 AIKVDA-YSKTNVDNIYAIGDVTDR-VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CBCCCT-TCBCSSTTEEECGGGGCS-CCCHHHHHHHHHHHHHHHHS
T ss_pred CEEECC-CCccCCCCEEEEeccCCC-ccCHHHHHHHHHHHHHHhcC
Confidence 999998 688999999999999973 57899999999999999863
No 38
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=2.5e-35 Score=288.20 Aligned_cols=292 Identities=20% Similarity=0.296 Sum_probs=216.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc------------------c---CCCCCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE------------------N---FPGFPQ 115 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~------------------~---~~~~~~ 115 (382)
..+||+|||||++|+++|..|++.|++|+|||+ ....||.+....... . ++....
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~----~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 117 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDR----WPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTE 117 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEES----SSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeC----CCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHh
Confidence 458999999999999999999999999999994 444677654321110 0 111111
Q ss_pred -CCChHHHHHHHH-------HHH-----HHcCcEEE-EeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCC
Q 016820 116 -GILGGDLMDRCR-------NQS-----LRFGTQIF-TETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPG 181 (382)
Q Consensus 116 -~~~~~~~~~~~~-------~~~-----~~~gi~~~-~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g 181 (382)
.+...++.+++. ..+ ++.+++++ .+++..++. +. +..++..+.||+||+|||++|..|+++|
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~--v~~~g~~~~~d~lViATGs~p~~p~i~G 193 (523)
T 1mo9_A 118 KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HT--VEAAGKVFKAKNLILAVGAGPGTLDVPG 193 (523)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TE--EEETTEEEEBSCEEECCCEECCCCCSTT
T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CE--EEECCEEEEeCEEEECCCCCCCCCCCCC
Confidence 122556666554 344 67799998 668888874 33 4345667999999999999999999998
Q ss_pred CccccCCCcceeeecc-CCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc--h---HHHHHHhccCCC
Q 016820 182 SDAFWNRGISACAVCD-GAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA--S---KIMQNRALTNPK 255 (382)
Q Consensus 182 ~~~~~~~~~~~~~~~~-~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~--~---~~~~~~~l~~~g 255 (382)
.+. ..+....... ... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . ...+.+.+++.|
T Consensus 194 ~~~---~~v~~~~~~~~~l~-~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~G 269 (523)
T 1mo9_A 194 VNA---KGVFDHATLVEELD-YEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQG 269 (523)
T ss_dssp TTS---BTEEEHHHHHHHCC-SCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTT
T ss_pred ccc---CcEeeHHHHHHHHH-hcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHHHHhCC
Confidence 764 1122221111 110 12238999999999999999999999999999999887632 1 122345677889
Q ss_pred cEEEcCceeEEEEecCCceeeeeEEEEeccCCceE-EEecCeEEEeeCCCCChh-hhc-ccccccCCCceeeCCCCCcCC
Q 016820 256 IDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVS-DLKVSGLFFAIGHEPATK-FVD-GQLDLHSDGYIITKPGTTHTS 332 (382)
Q Consensus 256 v~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~-~~~~D~vi~~~G~~p~~~-~~~-~~~~~~~~g~i~vd~~~~~t~ 332 (382)
|+++.++++.++..+++++ ++.+.+.. .++. ++++|.|++|+|.+|++. ++. .++.++++|++.||+ +++|+
T Consensus 270 V~i~~~~~V~~i~~~~~~~-v~~~~v~~---~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~-~~~t~ 344 (523)
T 1mo9_A 270 MEIISGSNVTRIEEDANGR-VQAVVAMT---PNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNE-YLQTS 344 (523)
T ss_dssp CEEESSCEEEEEEECTTSB-EEEEEEEE---TTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCT-TSBCS
T ss_pred cEEEECCEEEEEEEcCCCc-eEEEEEEE---CCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECC-CCccC
Confidence 9999999999999865542 32233443 2334 799999999999999998 565 578888899999998 78899
Q ss_pred CCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 333 VPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 333 ~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
.|+|||+|||++. ++.++.|..||+.+|.+|..
T Consensus 345 ~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 345 VPNVYAVGDLIGG-PMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp STTEEECGGGGCS-SCSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeecCCC-cccHHHHHHHHHHHHHHHcC
Confidence 9999999999974 47888999999999999973
No 39
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1.8e-35 Score=285.62 Aligned_cols=289 Identities=20% Similarity=0.178 Sum_probs=211.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc----------------cCC--CCC--CCC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE----------------NFP--GFP--QGI 117 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~----------------~~~--~~~--~~~ 117 (382)
.+||+|||||++|+++|..|++.|++|+|||+. ..||.+....... .+. +++ ...
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-----~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~ 77 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-----YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTF 77 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-----CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-----CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Confidence 479999999999999999999999999999952 4565543211000 000 000 011
Q ss_pred ChHH-----------HHHHHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcCCCCCCCc
Q 016820 118 LGGD-----------LMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKLQFPGSD 183 (382)
Q Consensus 118 ~~~~-----------~~~~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~~~~~g~~ 183 (382)
.... +...+.+.+++.+++++.++...+ +.+.+.+.+.+ .++.||+||+|||++|+.|+++|.+
T Consensus 78 ~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~i--d~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~ 155 (464)
T 2a8x_A 78 DYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFA--DANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLS 155 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEES--SSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCC
Confidence 2222 223345566778999998875443 45567776643 4699999999999999988888865
Q ss_pred cccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEE
Q 016820 184 AFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDV 258 (382)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~ 258 (382)
.. +......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||++
T Consensus 156 ~~----~~~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i 229 (464)
T 2a8x_A 156 AN----VVTYEEQILS--RELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTI 229 (464)
T ss_dssp TT----EECHHHHHTC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEE
T ss_pred ce----EEecHHHhhc--cccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEE
Confidence 31 1111111122 22478999999999999999999999999999999887632 1122345677889999
Q ss_pred EcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCCCc
Q 016820 259 IWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSVPG 335 (382)
Q Consensus 259 ~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~~~ 335 (382)
++++++.+++.++++ ..+.+. .+++..++++|.+++++|++|++.++ + .++.++++|+|.||+ .++|+.|+
T Consensus 230 ~~~~~v~~i~~~~~~---~~v~~~--~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~-~~~t~~~~ 303 (464)
T 2a8x_A 230 LTATKVESIADGGSQ---VTVTVT--KDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDD-YMRTNVGH 303 (464)
T ss_dssp ECSCEEEEEEECSSC---EEEEEE--SSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCT-TSBCSSTT
T ss_pred EeCcEEEEEEEcCCe---EEEEEE--cCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECc-CCccCCCC
Confidence 999999999987643 123333 12444679999999999999999873 3 467788889999999 68899999
Q ss_pred eEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 336 VFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 336 vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|||+|||++. ++.++.|..||+.+|.+|..
T Consensus 304 IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 304 IYAIGDVNGL-LQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp EEECGGGGCS-SCSHHHHHHHHHHHHHHHHT
T ss_pred EEEeECcCCC-ccCHHHHHHHHHHHHHHhcC
Confidence 9999999974 57888999999999999973
No 40
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=5.9e-36 Score=284.95 Aligned_cols=289 Identities=18% Similarity=0.169 Sum_probs=211.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCC--eEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELK--PILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFG 134 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~--v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 134 (382)
..+||||||||++|+++|..|++.|++ |+|||+.. ..+.... .....+ +.......++..+..+.+.+.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~----~~~y~~~--~l~~~~--~~~~~~~~~~~~~~~~~~~~~~ 79 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP----EIPYERP--PLSKEY--LAREKTFERICIRPAQFWEDKA 79 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS----SCCBCSG--GGGTTT--TTTSSCSGGGBSSCHHHHHHTT
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC----CCCcCcc--cCCHHH--HcCCCCHHHhccCCHHHHHHCC
Confidence 458999999999999999999999987 99999532 1111110 000001 1111122333334455667789
Q ss_pred cEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCCCCC-CCcEE
Q 016820 135 TQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAPIFR-DKPLA 209 (382)
Q Consensus 135 i~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~-~~~v~ 209 (382)
++++.+ +|..++.+.+.+.+. ++..+.||+||+|||++|+.|++||.+. +..+....+...... ... +++++
T Consensus 80 i~~~~~~~v~~id~~~~~v~~~-~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~--~~~~~~~vv 156 (415)
T 3lxd_A 80 VEMKLGAEVVSLDPAAHTVKLG-DGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAE--LDAGAKNAV 156 (415)
T ss_dssp EEEEETCCEEEEETTTTEEEET-TSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHH--HHTTCCEEE
T ss_pred cEEEeCCEEEEEECCCCEEEEC-CCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHH--hhhcCCeEE
Confidence 999999 899999887654442 4567999999999999999999998763 222222222222221 223 78999
Q ss_pred EEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc------hHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEe
Q 016820 210 VIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA------SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKN 283 (382)
Q Consensus 210 VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~ 283 (382)
|||+|.+|+|+|..+.+.|.+|+++++.+.+.. ......+.+++.||++++++.+.+++.++++ +..+++.+
T Consensus 157 ViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~v~l~d 234 (415)
T 3lxd_A 157 VIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTK--VTGVRMQD 234 (415)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSB--EEEEEESS
T ss_pred EECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCc--EEEEEeCC
Confidence 999999999999999999999999999887632 1222346677899999999999999986542 44455543
Q ss_pred ccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCchhh----------HHHH
Q 016820 284 LVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYR----------QAVT 352 (382)
Q Consensus 284 ~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~----------~~~~ 352 (382)
+ ..+++|.|++++|.+|++.++. .++..+ + .+.||+ +++|++|+|||+|||+..+.. .+..
T Consensus 235 ---G--~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~-gi~vd~-~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~ 306 (415)
T 3lxd_A 235 ---G--SVIPADIVIVGIGIVPCVGALISAGASGG-N-GVDVDE-FCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQN 306 (415)
T ss_dssp ---S--CEEECSEEEECSCCEESCHHHHHTTCCCS-S-SEECCT-TCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHH
T ss_pred ---C--CEEEcCEEEECCCCccChHHHHhCCCCcC-C-CEEECC-CCCcCCCCEEEEEeeeeecCcccCCcceeechHHH
Confidence 3 5799999999999999998876 456555 3 499998 788999999999999865421 3689
Q ss_pred HHhhHHHHHHHHHH
Q 016820 353 AAGTGCMAALEAEH 366 (382)
Q Consensus 353 a~~~g~~aa~~i~~ 366 (382)
|..||+.+|.+|..
T Consensus 307 A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 307 ANDMATAAAKDICG 320 (415)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999973
No 41
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=1.3e-36 Score=291.25 Aligned_cols=291 Identities=24% Similarity=0.278 Sum_probs=215.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+||+|||||++|+++|..|++.|++|+||| .....||.+.+ ++|......++.++..+.++++|++
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e----~~~~~GG~l~~--------gip~~~~~~~~~~~~~~~l~~~gv~ 188 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYD----RYDRMGGLLVY--------GIPGFKLEKSVVERRVKLLADAGVI 188 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEC----SSSSCSTHHHH--------TSCTTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEe----ccCCCCCeeee--------cCCCccCCHHHHHHHHHHHHHCCcE
Confidence 45799999999999999999999999999999 45567777653 2222333467788888888999999
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCC-CcCCCCCCCccccCCCccee-ee--------ccCC-------
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAV-AKKLQFPGSDAFWNRGISAC-AV--------CDGA------- 199 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~-~~~~~~~g~~~~~~~~~~~~-~~--------~~~~------- 199 (382)
++.++... ..+ ..++..+.||+||+|||+. |+.+++||.+. ..++.. .+ ....
T Consensus 189 ~~~~~~v~-----~~v--~~~~~~~~~d~vvlAtG~~~~~~~~ipG~~~---~gv~~a~~~l~~~~~~~~~~~~~~~~~g 258 (456)
T 2vdc_G 189 YHPNFEVG-----RDA--SLPELRRKHVAVLVATGVYKARDIKAPGSGL---GNIVAALDYLTTSNKVSLGDTVEAYENG 258 (456)
T ss_dssp EETTCCBT-----TTB--CHHHHHSSCSEEEECCCCCEECCTTCSCCTT---TTEEEHHHHHHHHHHHHCTTTCSSCCTT
T ss_pred EEeCCEec-----cEE--EhhHhHhhCCEEEEecCCCCCCCCCCCCCcC---CCcEEHHHHHHHhhhhhccccccccccc
Confidence 98875321 111 1122336799999999996 77788888653 111110 00 0000
Q ss_pred CCCCCCCcEEEEcCCchHHHHHHHHhhcCC-EEEEEEeCCCC--cchHHHHHHhccCCCcEEEcCceeEEEEecCCceee
Q 016820 200 APIFRDKPLAVIGGGDSAMEEANFLTKYGS-KVYIIHRRDSF--RASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVL 276 (382)
Q Consensus 200 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~-~v~~~~~~~~~--~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~ 276 (382)
.....+++|+|||+|.+|+|+|..+.+.|. +|++++|++.. +...... +.++++||+++++..+.++..+ |+ +
T Consensus 259 ~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~-~~~~~~Gv~~~~~~~~~~i~~~--g~-v 334 (456)
T 2vdc_G 259 SLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREV-AHAEEEGVEFIWQAAPEGFTGD--TV-V 334 (456)
T ss_dssp CSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHH-HHHHHTTCEEECCSSSCCEEEE--EE-E
T ss_pred ccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHH-HHHHHCCCEEEeCCCceEEeCC--Cc-E
Confidence 012468999999999999999999999987 59999998864 3223222 3466689999999999998763 21 3
Q ss_pred eeEEEEecc---------------CCceEEEecCeEEEeeCCCCChh--hhc-ccccccCCCceeeCCCCCcCCCCceEE
Q 016820 277 GGLKVKNLV---------------TGQVSDLKVSGLFFAIGHEPATK--FVD-GQLDLHSDGYIITKPGTTHTSVPGVFA 338 (382)
Q Consensus 277 ~~v~~~~~~---------------~~~~~~~~~D~vi~~~G~~p~~~--~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya 338 (382)
.++++.... ++++.++++|.||+++|++|+.. ++. .++.++++|++.||+.+++|+.|+|||
T Consensus 335 ~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA 414 (456)
T 2vdc_G 335 TGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFA 414 (456)
T ss_dssp ETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEE
T ss_pred EEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEE
Confidence 334443110 23446799999999999999875 444 577888999999999658899999999
Q ss_pred ecccCCchhhHHHHHHhhHHHHHHHHHHHHHHccCc
Q 016820 339 AGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIGSQ 374 (382)
Q Consensus 339 ~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~~~~ 374 (382)
+|||+.. ++++..|+.+|+.||.+|..+|.++...
T Consensus 415 ~GD~~~g-~~~v~~A~~~G~~aA~~i~~~L~~~~~~ 449 (456)
T 2vdc_G 415 AGDIVRG-ASLVVWAIRDGRDAAEGIHAYAKAKAEA 449 (456)
T ss_dssp CGGGGSS-CCSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eccccCC-chHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999864 5789999999999999999999986644
No 42
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=7.5e-36 Score=286.84 Aligned_cols=284 Identities=20% Similarity=0.243 Sum_probs=209.4
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCc---------------c-cCC--CCC---CC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDV---------------E-NFP--GFP---QG 116 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~---------------~-~~~--~~~---~~ 116 (382)
++||+|||||++|+++|..|++.|++|+|||+ . ..||.|....+. . ..+ +++ ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~----~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~ 78 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEA----K-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINK 78 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEES----S-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcC----C-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCc
Confidence 58999999999999999999999999999995 3 467765421100 0 000 110 01
Q ss_pred CChHHHHH-----------HHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccc
Q 016820 117 ILGGDLMD-----------RCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAF 185 (382)
Q Consensus 117 ~~~~~~~~-----------~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~ 185 (382)
.....+.+ .+...+.+.+++++.+++..++. +.+.+ ++.++.||+||+|||++|..|++||.+..
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~~--~g~~~~~d~lviAtGs~p~~p~i~g~~~~ 154 (450)
T 1ges_A 79 FNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA--KTLEV--NGETITADHILIATGGRPSHPDIPGVEYG 154 (450)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEET--TEEEE--TTEEEEEEEEEECCCEEECCCCSTTGGGS
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEE--CCEEEEeCEEEECCCCCCCCCCCCCccce
Confidence 22333332 23344466799999998777763 34444 66779999999999999999999987431
Q ss_pred cCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEEEc
Q 016820 186 WNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDVIW 260 (382)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~~~ 260 (382)
. ... .. ... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||+++.
T Consensus 155 ~--~~~--~~-~~~--~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~ 227 (450)
T 1ges_A 155 I--DSD--GF-FAL--PALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHT 227 (450)
T ss_dssp B--CHH--HH-HHC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEEC
T ss_pred e--cHH--Hh-hhh--hhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEe
Confidence 1 111 11 111 22478999999999999999999999999999999876531 122234567778999999
Q ss_pred CceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCCCceE
Q 016820 261 NSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSVPGVF 337 (382)
Q Consensus 261 ~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~~~vy 337 (382)
++++.+++.++++. ..+.+.+ + ..+++|.|++|+|++|++..+ + .++.++++|++.||+ +++|+.|+||
T Consensus 228 ~~~v~~i~~~~~~~--~~v~~~~---g--~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~-~~~t~~~~Iy 299 (450)
T 1ges_A 228 NAIPKAVVKNTDGS--LTLELED---G--RSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDK-YQNTNIEGIY 299 (450)
T ss_dssp SCCEEEEEECTTSC--EEEEETT---S--CEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCT-TSBCSSTTEE
T ss_pred CCEEEEEEEeCCcE--EEEEECC---C--cEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECC-CCccCCCCEE
Confidence 99999999865431 1233322 3 479999999999999999743 3 478888899999999 6789999999
Q ss_pred EecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 338 AAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 338 a~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|+|||++. +..+..|..||+.+|.+|..
T Consensus 300 A~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 300 AVGDNTGA-VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp ECSGGGTS-CCCHHHHHHHHHHHHHHHHT
T ss_pred EEeccCCC-CccHHHHHHHHHHHHHHHcC
Confidence 99999864 56888999999999999974
No 43
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=6e-35 Score=282.86 Aligned_cols=294 Identities=22% Similarity=0.262 Sum_probs=213.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEeccc--CCCCCCCcceecCCCc-------------------ccC--CCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWM--ANDIAPGGQLTTTSDV-------------------ENF--PGF 113 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~--~~~~~~gg~~~~~~~~-------------------~~~--~~~ 113 (382)
.++||+|||||++|+++|..|++.|++|+|||+.. ......||.|....+. ..+ ...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 35899999999999999999999999999999632 1112356655332111 000 000
Q ss_pred CCCCChHHHHH-----------HHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcCCCC
Q 016820 114 PQGILGGDLMD-----------RCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKLQF 179 (382)
Q Consensus 114 ~~~~~~~~~~~-----------~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~~~~ 179 (382)
........+.. .+....++.+++++.+++..++ .+.+.+..++ ..+.||+||+|||++|..|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~--~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~ 159 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLA--GKKVEVTAADGSSQVLDTENVILASGSKPVEIPP 159 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECS--TTCEEEECTTSCEEEECCSCEEECCCEEECCCTT
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEec--CCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCC
Confidence 11122333222 2334456679999999876654 4556676544 369999999999999887655
Q ss_pred CCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCC
Q 016820 180 PGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNP 254 (382)
Q Consensus 180 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~ 254 (382)
++.+. ..+..+...... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.
T Consensus 160 ~~~~~---~~v~~~~~~~~~--~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~ 234 (476)
T 3lad_A 160 APVDQ---DVIVDSTGALDF--QNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQ 234 (476)
T ss_dssp SCCCS---SSEEEHHHHTSC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHT
T ss_pred CCCCc---ccEEechhhhcc--ccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhC
Confidence 54322 222223222222 34578999999999999999999999999999999987642 122234567789
Q ss_pred CcEEEcCceeEEEEecCCceeeeeEEEEeccCCc-eEEEecCeEEEeeCCCCChhhh---cccccccCCCceeeCCCCCc
Q 016820 255 KIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQ-VSDLKVSGLFFAIGHEPATKFV---DGQLDLHSDGYIITKPGTTH 330 (382)
Q Consensus 255 gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~-~~~~~~D~vi~~~G~~p~~~~~---~~~~~~~~~g~i~vd~~~~~ 330 (382)
||++++++++.+++.++++ ..+.+.+ ++ ...+++|.|++++|++|++..+ ..++.++++|++.||+ .++
T Consensus 235 Gv~v~~~~~v~~i~~~~~~---~~v~~~~---~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~-~~~ 307 (476)
T 3lad_A 235 GLKILLGARVTGTEVKNKQ---VTVKFVD---AEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDD-YCA 307 (476)
T ss_dssp TEEEEETCEEEEEEECSSC---EEEEEES---SSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCT-TSB
T ss_pred CCEEEECCEEEEEEEcCCE---EEEEEEe---CCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCC-Ccc
Confidence 9999999999999987653 1244443 22 3679999999999999999854 2578888899999998 688
Q ss_pred CCCCceEEecccCCchhhHHHHHHhhHHHHHHHHH
Q 016820 331 TSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAE 365 (382)
Q Consensus 331 t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~ 365 (382)
|+.|||||+|||++. +..++.|+.||+.+|.+|.
T Consensus 308 t~~~~Iya~GD~~~~-~~~~~~A~~~g~~aa~~i~ 341 (476)
T 3lad_A 308 TSVPGVYAIGDVVRG-AMLAHKASEEGVVVAERIA 341 (476)
T ss_dssp CSSTTEEECGGGSSS-CCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEccCCC-cccHHHHHHHHHHHHHHhc
Confidence 999999999999963 5789999999999999996
No 44
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.1e-35 Score=287.54 Aligned_cols=294 Identities=23% Similarity=0.208 Sum_probs=214.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCccc----------------C--CCCC---C
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVEN----------------F--PGFP---Q 115 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~----------------~--~~~~---~ 115 (382)
.++||+|||||++|+++|..|++.|++|+||| +...+||.+........ + .+++ .
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE----~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 80 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIE----KRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNV 80 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEE----CSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEe----CCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 35899999999999999999999999999999 44456766532211000 0 0000 0
Q ss_pred CCChHH-----------HHHHHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcCCCCCC
Q 016820 116 GILGGD-----------LMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKLQFPG 181 (382)
Q Consensus 116 ~~~~~~-----------~~~~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~~~~~g 181 (382)
...... +...+...+++.+++++.+++..++ .+.+.+.+++ .+++||+||+|||++|..|+++|
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~--~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g 158 (470)
T 1dxl_A 81 EIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVS--PSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVT 158 (470)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEE--TTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEec--CCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCC
Confidence 112222 2223455666789999999765554 4566665433 46999999999999999988888
Q ss_pred CccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCc
Q 016820 182 SDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKI 256 (382)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv 256 (382)
.+. ..+......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||
T Consensus 159 ~~~---~~v~~~~~~~~~--~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv 233 (470)
T 1dxl_A 159 IDE---KKIVSSTGALAL--SEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGM 233 (470)
T ss_dssp CCS---SSEECHHHHTTC--SSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSC
T ss_pred CCc---ccEEeHHHhhhh--hhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCC
Confidence 653 111111111122 23478999999999999999999999999999999887632 12223456778899
Q ss_pred EEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCC
Q 016820 257 DVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSV 333 (382)
Q Consensus 257 ~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~ 333 (382)
+++.++++.+++.++++ ..+.+.+..++++.++++|.|++++|++|++.++ + .++.++++|++.||+ +++|+.
T Consensus 234 ~i~~~~~v~~i~~~~~~---~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~-~~~t~~ 309 (470)
T 1dxl_A 234 KFKLKTKVVGVDTSGDG---VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNE-RFSTNV 309 (470)
T ss_dssp CEECSEEEEEEECSSSS---EEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCT-TCBCSS
T ss_pred EEEeCCEEEEEEEcCCe---EEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECc-CCccCC
Confidence 99999999999987643 1244442112434679999999999999999873 3 467788889999999 688999
Q ss_pred CceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 334 PGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 334 ~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|+|||+|||++. ++.++.|..||+.+|.+|..
T Consensus 310 ~~Iya~GD~~~~-~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 310 SGVYAIGDVIPG-PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp TTEEECSTTSSS-CCCHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeccCCC-CccHHHHHHHHHHHHHHHcC
Confidence 999999999974 57888999999999999974
No 45
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=3.8e-35 Score=284.43 Aligned_cols=290 Identities=19% Similarity=0.219 Sum_probs=210.3
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCc--------------------ccCCCCCCCC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDV--------------------ENFPGFPQGI 117 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~--------------------~~~~~~~~~~ 117 (382)
.+||+|||||++|+++|..|++.|++|+|||+ ....||.+...... ..++......
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~----~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~ 81 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVER----YKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPEL 81 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES----SSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeC----CCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCcc
Confidence 58999999999999999999999999999994 34566654321100 0011111123
Q ss_pred ChHHHHH-----------HHHHHHHHcCcEEEEeeEEEEEecCCcEEEEEC-C------------eEEEcCEEEEccCCC
Q 016820 118 LGGDLMD-----------RCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTD-S------------KSVLADTVIVATGAV 173 (382)
Q Consensus 118 ~~~~~~~-----------~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~-~------------~~~~~d~lvlA~G~~ 173 (382)
....+.. .+...+++.+++++.+++..++ ++.+.+.+. + .+++||+||+|||++
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~--~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 82 DIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLD--PHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEE--TTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEcc--CCEEEEEecCCcccccccccCcceEEEcCEEEECCCCC
Confidence 3333332 2345567789999998755543 456666532 3 469999999999999
Q ss_pred CcCCC-CCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHH
Q 016820 174 AKKLQ-FPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQ 247 (382)
Q Consensus 174 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~ 247 (382)
|..|+ ++. +. . +......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .....
T Consensus 160 p~~~~~i~~-~~---~-v~~~~~~~~~--~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l 232 (482)
T 1ojt_A 160 VTKLPFIPE-DP---R-IIDSSGALAL--KEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVW 232 (482)
T ss_dssp ECCCSSCCC-CT---T-EECHHHHTTC--CCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHH
T ss_pred CCCCCCCCc-cC---c-EEcHHHHhcc--cccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHH
Confidence 98876 552 21 1 1122111222 23478999999999999999999999999999999887632 12233
Q ss_pred HHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceee
Q 016820 248 NRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIIT 324 (382)
Q Consensus 248 ~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~v 324 (382)
.+.+++.||++++++++.+++.++++ ..+++.+. .+.+.++++|.|++++|++|++.++ + .++.++++|+|.|
T Consensus 233 ~~~l~~~gV~i~~~~~v~~i~~~~~~---~~v~~~~~-~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~v 308 (482)
T 1ojt_A 233 QKQNEYRFDNIMVNTKTVAVEPKEDG---VYVTFEGA-NAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEV 308 (482)
T ss_dssp HHHHGGGEEEEECSCEEEEEEEETTE---EEEEEESS-SCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCC
T ss_pred HHHHHhcCCEEEECCEEEEEEEcCCe---EEEEEecc-CCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEee
Confidence 46678899999999999999987653 22444321 1113468899999999999999874 3 4677888899999
Q ss_pred CCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 325 KPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 325 d~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|+ +++|+.|+|||+|||++. ++.++.|..||+.+|.+|..
T Consensus 309 d~-~~~t~~~~IyA~GD~~~~-~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 309 DK-QMRTNVPHIYAIGDIVGQ-PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp CT-TSBCSSTTEEECGGGTCS-SCCHHHHHHHHHHHHHHHTT
T ss_pred CC-CcccCCCCEEEEEcccCC-CccHHHHHHHHHHHHHHHcC
Confidence 99 788999999999999974 57889999999999999974
No 46
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=6.6e-36 Score=289.19 Aligned_cols=292 Identities=17% Similarity=0.198 Sum_probs=201.5
Q ss_pred cccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecCCCccc-CCCC-C--CCC--ChHHHHHHHHHH
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTTSDVEN-FPGF-P--QGI--LGGDLMDRCRNQ 129 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~-~~~~-~--~~~--~~~~~~~~~~~~ 129 (382)
++||+|||||++|+++|..|++. |++|+|||+.. ..+... . .... +.+. + ..+ ...++..+...+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~----~~~~~~--~-gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 75 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS----RISYGG--C-GIPYYVSGEVSNIESLQATPYNVVRDPEFF 75 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC----cccccc--c-ccchhhcCCCCchHHhccccchhccCHHHH
Confidence 46999999999999999999999 99999999632 211000 0 0000 0000 0 000 011244555556
Q ss_pred HHHcCcEEEEe-eEEEEEecCCcEEEEE--CCe--EEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCC
Q 016820 130 SLRFGTQIFTE-TVSKVDFKSRPFKVFT--DSK--SVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAP 201 (382)
Q Consensus 130 ~~~~gi~~~~~-~v~~i~~~~~~~~v~~--~~~--~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~ 201 (382)
.++.+++++.+ +|+.++.+++.+.+.. ++. .+.||+||+|||++|..|++||.+. +................
T Consensus 76 ~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~ 155 (472)
T 3iwa_A 76 RINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAIS 155 (472)
T ss_dssp -----CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCC
T ss_pred hhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhh
Confidence 66789998776 7999999988888775 233 6999999999999999999998752 11111111111111111
Q ss_pred CCCCCcEEEEcCCchHHHHHHHHhhc-CCEEEEEEeCCCCcc------hHHHHHHhccCCCcEEEcCceeEEEEecCCce
Q 016820 202 IFRDKPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRDSFRA------SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKK 274 (382)
Q Consensus 202 ~~~~~~v~VvG~G~~a~e~a~~l~~~-g~~v~~~~~~~~~~~------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~ 274 (382)
...+++++|||+|.+|+|+|..|.+. |.+|+++.+.+.+.. ......+.+++.||+++.++++.+++.++++
T Consensus 156 ~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~- 234 (472)
T 3iwa_A 156 AGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGK- 234 (472)
T ss_dssp TTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSB-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCe-
Confidence 13478999999999999999999999 999999999887643 1222345677899999999999999985543
Q ss_pred eeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc--------
Q 016820 275 VLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK-------- 345 (382)
Q Consensus 275 ~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~-------- 345 (382)
+. +.+.+ + .++++|.|++|+|++|++.++. .++.++++|++.||+ +++|+.|||||+|||+..
T Consensus 235 -v~-v~~~~---g--~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~g~~ 306 (472)
T 3iwa_A 235 -VA-RVITD---K--RTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDT-RMRTSDPDIFAGGDCVTIPNLVTGKP 306 (472)
T ss_dssp -EE-EEEES---S--CEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCT-TCBCSSTTEEECGGGEEEEBTTTSSE
T ss_pred -EE-EEEeC---C--CEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECC-CcccCCCCEEEeccceecccccCCce
Confidence 21 33332 3 4799999999999999988765 578888999999998 788999999999999831
Q ss_pred -hhhHHHHHHhhHHHHHHHHH
Q 016820 346 -KYRQAVTAAGTGCMAALEAE 365 (382)
Q Consensus 346 -~~~~~~~a~~~g~~aa~~i~ 365 (382)
.++.+..|..||+.+|.||.
T Consensus 307 ~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 307 GFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp ECCCCTTHHHHHHHHHHHHHT
T ss_pred eecchHHHHHHHHHHHHHHhc
Confidence 13577899999999999987
No 47
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2e-35 Score=284.91 Aligned_cols=289 Identities=23% Similarity=0.271 Sum_probs=208.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCccc-----------------CCCCC--CCCC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVEN-----------------FPGFP--QGIL 118 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~-----------------~~~~~--~~~~ 118 (382)
++||+|||||++|+++|..|++.|++|+|||+. . .||.|......+. ..+++ ....
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~----~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 80 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAG----E-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELD 80 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS----C-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC----C-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcC
Confidence 589999999999999999999999999999953 2 6776533211100 00110 1123
Q ss_pred hHHHHHH-----------HHHHHHHcCcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCC-CCCCcccc
Q 016820 119 GGDLMDR-----------CRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQ-FPGSDAFW 186 (382)
Q Consensus 119 ~~~~~~~-----------~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~-~~g~~~~~ 186 (382)
...+..+ +...+++.+++++.+++..++ .+.+.+ ++.++.||+||+|||++|+.|+ +++...
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~--~~~v~v--~g~~~~~d~lViATGs~p~~p~gi~~~~~-- 154 (464)
T 2eq6_A 81 LKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVG--PKEVEV--GGERYGAKSLILATGSEPLELKGFPFGED-- 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE--TTEEEE--TTEEEEEEEEEECCCEEECCBTTBCCSSS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcc--CCEEEE--ccEEEEeCEEEEcCCCCCCCCCCCCCCCc--
Confidence 3333222 344556789999999766665 344444 3567999999999999998876 666321
Q ss_pred CCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEEEcC
Q 016820 187 NRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDVIWN 261 (382)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~~~~ 261 (382)
+......... ....+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||+++++
T Consensus 155 ---v~~~~~~~~l-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~ 230 (464)
T 2eq6_A 155 ---VWDSTRALKV-EEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTK 230 (464)
T ss_dssp ---EECHHHHTCG-GGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred ---EEcHHHHHhh-hhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcC
Confidence 1111111111 011468999999999999999999999999999999887632 1222345677889999999
Q ss_pred ceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCCCceEE
Q 016820 262 SVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSVPGVFA 338 (382)
Q Consensus 262 ~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~~~vya 338 (382)
+++.+++.++++ ..+.+....+++..++++|.|++|+|.+|+..++ + .++.++++|++.||+ .++|+.|+|||
T Consensus 231 ~~v~~i~~~~~~---~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~t~~~~Iya 306 (464)
T 2eq6_A 231 TKAVGYEKKKDG---LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNA-RMETSVPGVYA 306 (464)
T ss_dssp EEEEEEEEETTE---EEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCT-TCBCSSTTEEE
T ss_pred CEEEEEEEeCCE---EEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECC-CcccCCCCEEE
Confidence 999999987653 1244432111333479999999999999999864 2 467788899999998 68899999999
Q ss_pred ecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 339 AGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 339 ~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
+|||++. +..++.|..||+.+|.+|..
T Consensus 307 ~GD~~~~-~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 307 IGDAARP-PLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CGGGTCS-SCCHHHHHHHHHHHHHHHTT
T ss_pred EeccCCC-cccHHHHHHHHHHHHHHhcC
Confidence 9999974 57888999999999999974
No 48
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-35 Score=284.44 Aligned_cols=289 Identities=18% Similarity=0.163 Sum_probs=211.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCc---------------ccCC--CCC-----
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDV---------------ENFP--GFP----- 114 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~---------------~~~~--~~~----- 114 (382)
.++||+|||||++|+++|..|++.|++|+|||+ . ..||.|....+. .... ++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~----~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 84 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEA----K-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPL 84 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEES----S-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeC----C-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccc
Confidence 358999999999999999999999999999995 2 467765421100 0000 110
Q ss_pred ----CCCChHHHHH-----------HHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECC-e--EEEcCEEEEccCCCCcC
Q 016820 115 ----QGILGGDLMD-----------RCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDS-K--SVLADTVIVATGAVAKK 176 (382)
Q Consensus 115 ----~~~~~~~~~~-----------~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~-~--~~~~d~lvlA~G~~~~~ 176 (382)
.......+.+ .+...+++.+++++.+++..++ .+.+.+.+.+ . ++.||+||+|||++|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~ 162 (479)
T 2hqm_A 85 DKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNK--DGNVEVQKRDNTTEVYSANHILVATGGKAIF 162 (479)
T ss_dssp SGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECT--TSCEEEEESSSCCEEEEEEEEEECCCEEECC
T ss_pred ccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEee--CCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC
Confidence 1223333332 2344556779999999877664 3456666533 3 69999999999999999
Q ss_pred C-CCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHh
Q 016820 177 L-QFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRA 250 (382)
Q Consensus 177 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~ 250 (382)
| ++||.+... .+...... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+.+.. ......+.
T Consensus 163 p~~i~g~~~~~-----~~~~~~~l--~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~ 235 (479)
T 2hqm_A 163 PENIPGFELGT-----DSDGFFRL--EEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDH 235 (479)
T ss_dssp CTTSTTGGGSB-----CHHHHHHC--SSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHH
T ss_pred CCCCCCccccc-----chHHHhcc--cccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHH
Confidence 8 899874311 11111111 23478999999999999999999999999999999887532 12223456
Q ss_pred ccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhh-hc-ccccccCCCceeeCCCC
Q 016820 251 LTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKF-VD-GQLDLHSDGYIITKPGT 328 (382)
Q Consensus 251 l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~-~~-~~~~~~~~g~i~vd~~~ 328 (382)
+++.||++++++++.+++.++++. +..+.+++ ++ ..+++|.|++++|++|++.+ ++ .++.++++|++.||+ +
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~~~~~-~~~v~~~~---G~-~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~-~ 309 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKNVETD-KLKIHMND---SK-SIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADE-Y 309 (479)
T ss_dssp HHHHTCEEECSCCEEEEEECC-CC-CEEEEETT---SC-EEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCT-T
T ss_pred HHhCCeEEEeCCEEEEEEEcCCCc-EEEEEECC---Cc-EEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECC-C
Confidence 777899999999999998865431 12243322 32 57999999999999999955 33 578888899999999 6
Q ss_pred CcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 329 THTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 329 ~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
++|+.|+|||+|||++. +..+..|..||+.+|.+|..
T Consensus 310 ~~t~~~~IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVVGK-VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CBCSSTTEEECGGGTTS-SCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEecCCC-cccHHHHHHHHHHHHHHhcC
Confidence 78999999999999864 56889999999999999874
No 49
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.3e-34 Score=279.78 Aligned_cols=286 Identities=24% Similarity=0.283 Sum_probs=211.4
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCc-----------------ccCC-CCC---CC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDV-----------------ENFP-GFP---QG 116 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~-----------------~~~~-~~~---~~ 116 (382)
++||+|||||++|+++|..|++.|++|+|||+ . ..||.|....+. ..+. +++ ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~----~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 78 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIER----G-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPT 78 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES----S-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeC----C-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCc
Confidence 58999999999999999999999999999994 3 567765432110 0111 111 12
Q ss_pred CChHHHHH-------HH-----HHHHHHc-CcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcCCCCC
Q 016820 117 ILGGDLMD-------RC-----RNQSLRF-GTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKLQFP 180 (382)
Q Consensus 117 ~~~~~~~~-------~~-----~~~~~~~-gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~~~~~ 180 (382)
.....+.. ++ .+.+++. +++++.+++..++. +.+.+.+++ .++.||+||+|||++|+.|++|
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~--~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~ 156 (467)
T 1zk7_A 79 IDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDD--QSLTVRLNEGGERVVMFDRCLVATGASPAVPPIP 156 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEET--TEEEEEETTSSEEEEECSEEEECCCEEECCCCCT
T ss_pred cCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccC--CEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCC
Confidence 23333332 22 2344556 99999998877773 456666544 4699999999999999999999
Q ss_pred CCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-h---HHHHHHhccCCCc
Q 016820 181 GSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-S---KIMQNRALTNPKI 256 (382)
Q Consensus 181 g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-~---~~~~~~~l~~~gv 256 (382)
|.+.... . ........ ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . .....+.+++.||
T Consensus 157 G~~~~~~--~-~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~Gv 231 (467)
T 1zk7_A 157 GLKESPY--W-TSTEALAS--DTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFREDPAIGEAVTAAFRAEGI 231 (467)
T ss_dssp TTTTSCC--B-CHHHHHHC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCcCce--e-cHHHHhcc--cccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCCCCHHHHHHHHHHHHhCCC
Confidence 8764211 1 11111111 23478999999999999999999999999999999887532 1 1223456777899
Q ss_pred EEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh---cccccccCCCceeeCCCCCcCCC
Q 016820 257 DVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV---DGQLDLHSDGYIITKPGTTHTSV 333 (382)
Q Consensus 257 ~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~---~~~~~~~~~g~i~vd~~~~~t~~ 333 (382)
+++.++++.+++.+++. +.+.. +. .++++|.|++|+|.+|+...+ ..++.++++|++.||+ .++|+.
T Consensus 232 ~i~~~~~v~~i~~~~~~-----~~v~~---~~-~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~-~~~t~~ 301 (467)
T 1zk7_A 232 EVLEHTQASQVAHMDGE-----FVLTT---TH-GELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQ-GMRTSN 301 (467)
T ss_dssp EEETTCCEEEEEEETTE-----EEEEE---TT-EEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCT-TCBCSS
T ss_pred EEEcCCEEEEEEEeCCE-----EEEEE---CC-cEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECC-CcccCC
Confidence 99999999999886542 23333 22 479999999999999998753 2467778889999998 788999
Q ss_pred CceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 334 PGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 334 ~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|+|||+|||+.. +..+..|+.||+.+|.+|..
T Consensus 302 ~~iya~GD~~~~-~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 302 PNIYAAGDCTDQ-PQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp TTEEECSTTBSS-CCCHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeccCCC-cccHHHHHHHHHHHHHHHcC
Confidence 999999999974 56788999999999999964
No 50
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=7.3e-36 Score=283.65 Aligned_cols=284 Identities=22% Similarity=0.255 Sum_probs=206.7
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCC--eEEEecccCCCCCCCcce-ecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELK--PILFEGWMANDIAPGGQL-TTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~--v~lie~~~~~~~~~gg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
++|+|||||++|+++|..|++.|++ |+|||+.. ..+... ...... +.+ .....++ .+..+.+.+.++
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~----~~~y~~~~l~~~~--~~g---~~~~~~~-~~~~~~~~~~~i 72 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP----HLPYDRPSLSKAV--LDG---SLERPPI-LAEADWYGEARI 72 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS----SSSBCSGGGGTHH--HHT---SSSSCCB-SSCTTHHHHTTC
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC----CCCcCCccccHHH--hCC---CCCHHHh-cCCHHHHHHCCC
Confidence 5899999999999999999999988 99999532 111110 000000 000 0000111 112334466799
Q ss_pred EEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCCCCCCCcEEEE
Q 016820 136 QIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAPIFRDKPLAVI 211 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~v~Vv 211 (382)
+++.+ +|+.++.+.+.+.+. ++.++.||+||+|||++|+.|++||.+. +..+........... ...+++++||
T Consensus 73 ~~~~~~~v~~id~~~~~v~~~-~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~--~~~~~~vvVi 149 (410)
T 3ef6_A 73 DMLTGPEVTALDVQTRTISLD-DGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDS--WTSATRLLIV 149 (410)
T ss_dssp EEEESCCEEEEETTTTEEEET-TSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHH--CCTTCEEEEE
T ss_pred EEEeCCEEEEEECCCCEEEEC-CCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHH--hccCCeEEEE
Confidence 99999 899999887654442 4557999999999999999999998763 222222222222222 3457999999
Q ss_pred cCCchHHHHHHHHhhcCCEEEEEEeCCCCcc------hHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEecc
Q 016820 212 GGGDSAMEEANFLTKYGSKVYIIHRRDSFRA------SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLV 285 (382)
Q Consensus 212 G~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~ 285 (382)
|+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||++++++.+.+++.++. +..+++.+
T Consensus 150 GgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~---~~~v~~~d-- 224 (410)
T 3ef6_A 150 GGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQ---LEQVMASD-- 224 (410)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSS---CCEEEETT--
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCc---EEEEEECC--
Confidence 9999999999999999999999999987642 122234567788999999999999988653 33455543
Q ss_pred CCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCch--------hhHHHHHHhh
Q 016820 286 TGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKK--------YRQAVTAAGT 356 (382)
Q Consensus 286 ~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~--------~~~~~~a~~~ 356 (382)
+ .++++|.|++++|.+|++.++. .++..+ +++.||+ .++|++|+|||+|||+..+ +..+..|..|
T Consensus 225 -g--~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~--~gi~vd~-~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~q 298 (410)
T 3ef6_A 225 -G--RSFVADSALICVGAEPADQLARQAGLACD--RGVIVDH-CGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQ 298 (410)
T ss_dssp -S--CEEECSEEEECSCEEECCHHHHHTTCCBS--SSEECCT-TSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHH
T ss_pred -C--CEEEcCEEEEeeCCeecHHHHHhCCCccC--CeEEEcc-CeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHH
Confidence 3 5799999999999999998776 466665 4599998 7789999999999998643 2347899999
Q ss_pred HHHHHHHHHH
Q 016820 357 GCMAALEAEH 366 (382)
Q Consensus 357 g~~aa~~i~~ 366 (382)
|+.+|.+|..
T Consensus 299 g~~aa~~i~g 308 (410)
T 3ef6_A 299 AAAVAAAILG 308 (410)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999999974
No 51
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=3.3e-35 Score=276.93 Aligned_cols=284 Identities=15% Similarity=0.176 Sum_probs=208.8
Q ss_pred cccEEEECCcHHHHHHHHHHHHcC--CCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHH-HHHHHHHHcC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAE--LKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMD-RCRNQSLRFG 134 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g 134 (382)
++||+|||||++|+++|..|++.| .+|+|+|++. |..+..+. .... ++......++.. ++.+.+++.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~------g~~~~~~~-l~~~--~~~~~~~~~~~~~~~~~~~~~~~ 74 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD------GRSYSKPM-LSTG--FSKNKDADGLAMAEPGAMAEQLN 74 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC------CCEECGGG-GGGT--TTTTCCHHHHEEECHHHHHHHTT
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC------CCccCccc-ccHH--HhCCCCHHHhhccCHHHHHHhCC
Confidence 479999999999999999999998 5689999531 22221111 1111 112233444433 4566667889
Q ss_pred cEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCCCCCCCcEEE
Q 016820 135 TQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAPIFRDKPLAV 210 (382)
Q Consensus 135 i~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~v~V 210 (382)
++++.+ ++..++.+++. +..+++++.||+||+|||++|..|++||.+. +..+....+...... ...+++++|
T Consensus 75 v~~~~~~~v~~i~~~~~~--v~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~--~~~~~~v~V 150 (384)
T 2v3a_A 75 ARILTHTRVTGIDPGHQR--IWIGEEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQA--AAGKRRVLL 150 (384)
T ss_dssp CEEECSCCCCEEEGGGTE--EEETTEEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHH--HTTCCEEEE
T ss_pred cEEEeCCEEEEEECCCCE--EEECCcEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHh--hccCCeEEE
Confidence 999877 68999877654 4446678999999999999999999988652 222333222222111 234799999
Q ss_pred EcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---h---HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEec
Q 016820 211 IGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---S---KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNL 284 (382)
Q Consensus 211 vG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---~---~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~ 284 (382)
||+|.+|+|+|..|.+.|.+|+++++.+.+.. . .....+.+++.||+++.++++.+++.++++ +.+..
T Consensus 151 iGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-----~~v~~- 224 (384)
T 2v3a_A 151 LGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEG-----LEAHL- 224 (384)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTE-----EEEEE-
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCE-----EEEEE-
Confidence 99999999999999999999999999887532 1 223346677899999999999999987653 33333
Q ss_pred cCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc---hhhHHHHHHhhHHHH
Q 016820 285 VTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK---KYRQAVTAAGTGCMA 360 (382)
Q Consensus 285 ~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~---~~~~~~~a~~~g~~a 360 (382)
.++.++++|.+++|+|.+|+..+++ .++..+ +| +.||+ +++|+.|+|||+|||+.. ....+..|..||+.+
T Consensus 225 --~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~-~g-i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~ 299 (384)
T 2v3a_A 225 --SDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN-RG-IVVDR-SLRTSHANIYALGDCAEVDGLNLLYVMPLMACARAL 299 (384)
T ss_dssp --TTSCEEEESEEEECSCEEECCHHHHHTTCCBS-SS-EEECT-TCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHH
T ss_pred --CCCCEEECCEEEECcCCCcCHHHHHHCCCCCC-CC-EEECC-CCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHH
Confidence 2235799999999999999998765 467666 57 99998 688999999999999842 233567789999999
Q ss_pred HHHHH
Q 016820 361 ALEAE 365 (382)
Q Consensus 361 a~~i~ 365 (382)
|.+|.
T Consensus 300 a~~i~ 304 (384)
T 2v3a_A 300 AQTLA 304 (384)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99986
No 52
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=4.6e-35 Score=284.00 Aligned_cols=287 Identities=20% Similarity=0.215 Sum_probs=212.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc------------------cC--CCCCCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE------------------NF--PGFPQG 116 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~------------------~~--~~~~~~ 116 (382)
..+||+|||||++|+++|+.|++.|++|+|||+ ...||.+....+.. .+ ......
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-----~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~ 99 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-----YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPI 99 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-----SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-----CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCc
Confidence 468999999999999999999999999999994 35777654321100 01 000011
Q ss_pred CChH-----------HHHHHHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCc-CCCCCCCcc
Q 016820 117 ILGG-----------DLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAK-KLQFPGSDA 184 (382)
Q Consensus 117 ~~~~-----------~~~~~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~-~~~~~g~~~ 184 (382)
.... .+...+...+.+.+++++.+++..++. ..+.+..++..+.||++|+|||++|. .|+++|.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~ 177 (484)
T 3o0h_A 100 FNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDE--HTLELSVTGERISAEKILIATGAKIVSNSAIKGSDL 177 (484)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccc
Confidence 2222 233344555667799999998888863 33333225677999999999999998 888998764
Q ss_pred ccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEEE
Q 016820 185 FWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDVI 259 (382)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~~ 259 (382)
.... ...... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+.+.. ......+.+++.||+++
T Consensus 178 ~~~~-----~~~~~~--~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 250 (484)
T 3o0h_A 178 CLTS-----NEIFDL--EKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISII 250 (484)
T ss_dssp SBCT-----TTGGGC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred cccH-----HHHHhH--HhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 2211 111111 23478999999999999999999999999999999886532 12222456777899999
Q ss_pred cCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc---ccccccCCCceeeCCCCCcCCCCce
Q 016820 260 WNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD---GQLDLHSDGYIITKPGTTHTSVPGV 336 (382)
Q Consensus 260 ~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~---~~~~~~~~g~i~vd~~~~~t~~~~v 336 (382)
.++++.+++.++++ +.+.. .++.++++|.|++|+|++|+..++. .++.++++|++.||+ .++|+.|+|
T Consensus 251 ~~~~V~~i~~~~~~-----v~v~~---~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~t~~~~I 321 (484)
T 3o0h_A 251 YEATVSQVQSTENC-----YNVVL---TNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDE-KMTTNVSHI 321 (484)
T ss_dssp SSCCEEEEEECSSS-----EEEEE---TTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCT-TSBCSSTTE
T ss_pred eCCEEEEEEeeCCE-----EEEEE---CCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECC-CCCCCCCCE
Confidence 99999999987654 33433 2235799999999999999998642 578889999999998 788999999
Q ss_pred EEecccCCchhhHHHHHHhhHHHHHHHHHHH
Q 016820 337 FAAGDVQDKKYRQAVTAAGTGCMAALEAEHY 367 (382)
Q Consensus 337 ya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~ 367 (382)
||+|||++ .++.+..|..||+.+|.+|...
T Consensus 322 ya~GD~~~-~~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 322 WAVGDVTG-HIQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp EECGGGGT-SCCCHHHHHHHHHHHHHHHHC-
T ss_pred EEEEecCC-CCcCHHHHHHHHHHHHHHHcCC
Confidence 99999997 3678999999999999999853
No 53
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=7.9e-36 Score=290.19 Aligned_cols=295 Identities=16% Similarity=0.127 Sum_probs=212.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccC----CCCCCCcceecCCCcc----------------cC--CCCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMA----NDIAPGGQLTTTSDVE----------------NF--PGFP 114 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~----~~~~~gg~~~~~~~~~----------------~~--~~~~ 114 (382)
.+|||+|||+|++|+.+|..++++|.+|+|||+... .....||+|....+.+ .. .++.
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~ 120 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWK 120 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcc
Confidence 368999999999999999999999999999995321 1235788765433211 00 0110
Q ss_pred ---CCCChHHHHHHH-----------HHHHHHcCcEEEEeeEEEEEecCCcEEEEE-----CCeEEEcCEEEEccCCCCc
Q 016820 115 ---QGILGGDLMDRC-----------RNQSLRFGTQIFTETVSKVDFKSRPFKVFT-----DSKSVLADTVIVATGAVAK 175 (382)
Q Consensus 115 ---~~~~~~~~~~~~-----------~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~-----~~~~~~~d~lvlA~G~~~~ 175 (382)
...++..+.++. ...+++.+|+++.+....+++ +.+.+.. +..+++++++|+|||++|.
T Consensus 121 ~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~--~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~ 198 (542)
T 4b1b_A 121 FDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDK--NTVSYYLKGDLSKEETVTGKYILIATGCRPH 198 (542)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEET--TEEEEEEC--CCCEEEEEEEEEEECCCEEEC
T ss_pred cCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCC--CcceEeecccCCceEEEeeeeEEeccCCCCC
Confidence 012344444332 233456799999888777663 3444432 2245999999999999999
Q ss_pred CCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcch----HHHHHHhc
Q 016820 176 KLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRAS----KIMQNRAL 251 (382)
Q Consensus 176 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~----~~~~~~~l 251 (382)
.|+.++...- .....+..... ...+++++|||+|.+|+|+|..+.++|.+||++.+...++.. ....++.|
T Consensus 199 ~P~~~~~~~~---~~~ts~~~l~l--~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~D~ei~~~l~~~l 273 (542)
T 4b1b_A 199 IPDDVEGAKE---LSITSDDIFSL--KKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYM 273 (542)
T ss_dssp CCSSSBTHHH---HCBCHHHHTTC--SSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTSCHHHHHHHHHHH
T ss_pred CCCcccCCCc---cccCchhhhcc--ccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccccchhHHHHHHHHH
Confidence 8865443320 01111111222 345899999999999999999999999999999886655321 22234678
Q ss_pred cCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc---ccccccCCCceeeCCCC
Q 016820 252 TNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD---GQLDLHSDGYIITKPGT 328 (382)
Q Consensus 252 ~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~---~~~~~~~~g~i~vd~~~ 328 (382)
++.||+++.+..+.++...+++ +.+.. .++..+.+|.|++++|++||++.+. .++.++..+++.+++++
T Consensus 274 ~~~gi~~~~~~~v~~~~~~~~~-----~~v~~---~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~ 345 (542)
T 4b1b_A 274 EEQGVMFKNGILPKKLTKMDDK-----ILVEF---SDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHL 345 (542)
T ss_dssp HHTTCEEEETCCEEEEEEETTE-----EEEEE---TTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTT
T ss_pred HhhcceeecceEEEEEEecCCe-----EEEEE---cCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEecccc
Confidence 8899999999999999998864 45544 2335678999999999999999776 36677777776544448
Q ss_pred CcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 329 THTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 329 ~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
++|+.|||||+|||++..+..++.|..+|+.++.++..
T Consensus 346 ~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g 383 (542)
T 4b1b_A 346 SCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFK 383 (542)
T ss_dssp SBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHS
T ss_pred ccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhc
Confidence 99999999999999976678999999999999999863
No 54
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=7.9e-36 Score=287.12 Aligned_cols=290 Identities=19% Similarity=0.215 Sum_probs=209.3
Q ss_pred ccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecCCCcccC-CCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 59 TKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTTSDVENF-PGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
+||+|||||++|+++|..|++. |.+|+|||+.. ..+... .....+ .+........++...+.+.+++.++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~----~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv 73 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND----NISFLS---CGIALYLGKEIKNNDPRGLFYSSPEELSNLGA 73 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS----CCCBCG---GGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC----CCCccc---ccchhhhcCCcccCCHHHhhhcCHHHHHHcCC
Confidence 4899999999999999999999 99999999632 111100 000000 0000000122222233445567899
Q ss_pred EEEEe-eEEEEEecCCcEEEEEC----CeEEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCCCCCCCc
Q 016820 136 QIFTE-TVSKVDFKSRPFKVFTD----SKSVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAPIFRDKP 207 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~~~v~~~----~~~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 207 (382)
+++.+ ++..++.+++.+.+... +.++.||+||+|||++|+.|++||.+. +..+........... ...+++
T Consensus 74 ~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~--~~~~~~ 151 (452)
T 2cdu_A 74 NVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEE--APKAKT 151 (452)
T ss_dssp EEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHH--GGGCSE
T ss_pred EEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHH--hccCCe
Confidence 99888 59999988887777641 346999999999999999999998753 111111111111111 235789
Q ss_pred EEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---h---HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEE
Q 016820 208 LAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---S---KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKV 281 (382)
Q Consensus 208 v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---~---~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~ 281 (382)
++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . .....+.+++.||++++++++.+++.++++ +..+
T Consensus 152 vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~--v~~v-- 227 (452)
T 2cdu_A 152 ITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDE--IITK-- 227 (452)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTE--EEEE--
T ss_pred EEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCe--EEEE--
Confidence 99999999999999999999999999999887533 1 122345677899999999999999874432 2212
Q ss_pred EeccCCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCch---------hhHHHH
Q 016820 282 KNLVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKK---------YRQAVT 352 (382)
Q Consensus 282 ~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~---------~~~~~~ 352 (382)
.. ++ .++++|.|++++|++|++.+++..+.++++|++.||+ +++|+.|+|||+|||+... +..+..
T Consensus 228 ~~--~g--~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~ 302 (452)
T 2cdu_A 228 TL--DG--KEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDE-YMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATN 302 (452)
T ss_dssp ET--TS--CEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCT-TSBCSSTTEEECSTTBCEEETTTTEEECCCCHHH
T ss_pred Ee--CC--CEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECC-CcCcCCCCEEEcceEEEeccccCCCeeecchHHH
Confidence 21 23 5799999999999999998876336777899999999 7899999999999999742 357899
Q ss_pred HHhhHHHHHHHHHH
Q 016820 353 AAGTGCMAALEAEH 366 (382)
Q Consensus 353 a~~~g~~aa~~i~~ 366 (382)
|..||+.+|.+|..
T Consensus 303 A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 303 AVRQGRLVGLNLTE 316 (452)
T ss_dssp HHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999973
No 55
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.4e-36 Score=287.50 Aligned_cols=285 Identities=21% Similarity=0.234 Sum_probs=203.8
Q ss_pred cccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecCCCcccCCCCCC-CCChHHHHHHHHH-HHHHc
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQ-GILGGDLMDRCRN-QSLRF 133 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~ 133 (382)
++||+|||||++|+++|..|++. |++|+|||+.. ..+.... .+|.+.. .....++..+..+ +.++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~----~~~~~~~------~~p~~~~~~~~~~~~~~~~~~~~~~~~ 72 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE----WVSHAPC------GIPYVVEGLSTPDKLMYYPPEVFIKKR 72 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS----CCC------------------------------CTHHHHT
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC----ccccCCc------CCccccCCCCCHHHhhhcCHHHHHHhc
Confidence 47999999999999999999998 88999999532 2221100 0111111 1122334443333 33678
Q ss_pred CcEEEEe-eEEEEEecCCcEEEEECCe--EEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCCCCCCCc
Q 016820 134 GTQIFTE-TVSKVDFKSRPFKVFTDSK--SVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAPIFRDKP 207 (382)
Q Consensus 134 gi~~~~~-~v~~i~~~~~~~~v~~~~~--~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 207 (382)
+++++.+ +|..++.+. +.+.++++ ++.||+||+|||++|+.|++||.+. +.......+...........+++
T Consensus 73 gi~v~~~~~v~~i~~~~--~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 150 (449)
T 3kd9_A 73 GIDLHLNAEVIEVDTGY--VRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVEN 150 (449)
T ss_dssp TCEEETTCEEEEECSSE--EEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCE
T ss_pred CcEEEecCEEEEEecCC--CEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCe
Confidence 9999999 799997654 34555443 6999999999999999999998764 22222222222222211225789
Q ss_pred EEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcch------HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEE
Q 016820 208 LAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRAS------KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKV 281 (382)
Q Consensus 208 v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~ 281 (382)
++|||+|.+|+|+|..|.+.|.+|+++++.+.+... .....+.+++. |+++.++.+.+++.++. +..+ +
T Consensus 151 vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~---v~~v-~ 225 (449)
T 3kd9_A 151 VVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEER---VEKV-V 225 (449)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSSS---CCEE-E
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccCc---EEEE-E
Confidence 999999999999999999999999999998876421 22234567777 99999999999987652 2212 2
Q ss_pred EeccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc---------hhhHHH
Q 016820 282 KNLVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK---------KYRQAV 351 (382)
Q Consensus 282 ~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~---------~~~~~~ 351 (382)
.+ + .++++|.|++++|++|++.++. .++.++++|++.||+ +++|+.|+|||+|||+.. .++.+.
T Consensus 226 ~~---g--~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~ 299 (449)
T 3kd9_A 226 TD---A--GEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNE-KMQTSVENVYAAGDVAETRHVITGRRVWVPLAP 299 (449)
T ss_dssp ET---T--EEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCT-TCBCSSTTEEECSTTBCEEBTTTCSEECCCCHH
T ss_pred eC---C--CEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECC-CCccCCCCEEEeeeeeeeccccCCceEEeccHH
Confidence 21 3 5799999999999999998776 578888999999998 788999999999999842 146889
Q ss_pred HHHhhHHHHHHHHH
Q 016820 352 TAAGTGCMAALEAE 365 (382)
Q Consensus 352 ~a~~~g~~aa~~i~ 365 (382)
.|..||+.+|.+|.
T Consensus 300 ~A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 300 AGNKMGYVAGSNIA 313 (449)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999987
No 56
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.4e-36 Score=283.22 Aligned_cols=286 Identities=19% Similarity=0.210 Sum_probs=209.4
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCC--CeEEEecccCCCCCCCcc-eecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAEL--KPILFEGWMANDIAPGGQ-LTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~--~v~lie~~~~~~~~~gg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
++|+|||||++|+++|..|++.|+ +|+|||+.. ..... ....... +. ......++..+..+.+.+.++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~----~~~y~~~~l~~~~--l~---~~~~~~~~~~~~~~~~~~~~i 72 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK----HLPYQRPPLSKAY--LK---SGGDPNSLMFRPEKFFQDQAI 72 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS----SSSBCSGGGGTGG--GG---SCCCTTSSBSSCHHHHHHTTE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC----CCCCCCccCCHHH--HC---CCCCHHHccCCCHHHHHhCCC
Confidence 689999999999999999999998 899999532 11111 1110000 00 011112222233445567899
Q ss_pred EEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCCCCCCCcEEEEc
Q 016820 136 QIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAPIFRDKPLAVIG 212 (382)
Q Consensus 136 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~v~VvG 212 (382)
+++..+|+.++.+.+.+.+. ++.++.||+||+|||++|+.|++||.+. +..+....+...... ...+++++|||
T Consensus 73 ~~~~~~v~~id~~~~~v~~~-~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~--~~~~~~vvViG 149 (404)
T 3fg2_P 73 ELISDRMVSIDREGRKLLLA-SGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQR--MPDKKHVVVIG 149 (404)
T ss_dssp EEECCCEEEEETTTTEEEES-SSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHH--GGGCSEEEEEC
T ss_pred EEEEEEEEEEECCCCEEEEC-CCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHH--hhcCCeEEEEC
Confidence 99887899999887755443 4567999999999999999999998653 222333333333222 33578999999
Q ss_pred CCchHHHHHHHHhhcCCEEEEEEeCCCCcc------hHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccC
Q 016820 213 GGDSAMEEANFLTKYGSKVYIIHRRDSFRA------SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVT 286 (382)
Q Consensus 213 ~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~ 286 (382)
+|.+|+|+|..+.+.|.+|+++++.+.+.. ......+.+++.||++++++.+.+++.+++. +..+++.+
T Consensus 150 gG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~V~~~d--- 224 (404)
T 3fg2_P 150 AGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDR--VTGVVLSD--- 224 (404)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTE--EEEEEETT---
T ss_pred CCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCc--EEEEEeCC---
Confidence 999999999999999999999999887632 1223345677899999999999999987642 44455543
Q ss_pred CceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCchh---------hHHHHHHhh
Q 016820 287 GQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKY---------RQAVTAAGT 356 (382)
Q Consensus 287 ~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~---------~~~~~a~~~ 356 (382)
+ .++++|.|++|+|.+|+..++. .++..+ +| +.||+ +++|+.|+|||+|||+..+. ..+..|..|
T Consensus 225 G--~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~G-i~vd~-~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~q 299 (404)
T 3fg2_P 225 G--NTLPCDLVVVGVGVIPNVEIAAAAGLPTA-AG-IIVDQ-QLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQ 299 (404)
T ss_dssp S--CEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EEECT-TSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHH
T ss_pred C--CEEEcCEEEECcCCccCHHHHHhCCCCCC-CC-EEECC-CcccCCCCEEEeecceeecCccCCceeeehHHHHHHHH
Confidence 3 5799999999999999998776 466665 44 99998 78899999999999986432 247899999
Q ss_pred HHHHHHHHHH
Q 016820 357 GCMAALEAEH 366 (382)
Q Consensus 357 g~~aa~~i~~ 366 (382)
|+.+|.+|..
T Consensus 300 g~~aa~~i~g 309 (404)
T 3fg2_P 300 ARCVAARLTG 309 (404)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHhCC
Confidence 9999999873
No 57
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=7.9e-36 Score=295.18 Aligned_cols=291 Identities=21% Similarity=0.211 Sum_probs=212.5
Q ss_pred ccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecCCCccc-CCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 59 TKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTTSDVEN-FPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
++|+|||||++|+++|..|++. +++|+|||+.. ..+.. .. .... +.+. .......+.+++..+.+++++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~----~~~~~--~~-~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~i 73 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGE----YVSFA--NC-GLPYHISGE-IAQRSALVLQTPESFKARFNV 73 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSS----CSSBC--GG-GHHHHHTSS-SCCGGGGBCCCHHHHHHHHCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC----Ccccc--cc-CchHHhcCC-cCChHHhhccCHHHHHHhcCc
Confidence 5899999999999999999999 89999999532 22210 00 0000 0010 011222344455666667899
Q ss_pred EEEEe-eEEEEEecCCcEEEEE--CC--eEEEcCEEEEccCCCCcCCCCCCCcccc---CCCcceeeeccCCCCCCCCCc
Q 016820 136 QIFTE-TVSKVDFKSRPFKVFT--DS--KSVLADTVIVATGAVAKKLQFPGSDAFW---NRGISACAVCDGAAPIFRDKP 207 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~~~v~~--~~--~~~~~d~lvlA~G~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~ 207 (382)
+++.+ +|+.++.+.+.+.+.. ++ .++.||+||+|||++|+.|++||.+... .+....+...........+++
T Consensus 74 ~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~ 153 (565)
T 3ntd_A 74 EVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEH 153 (565)
T ss_dssp EEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSE
T ss_pred EEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCE
Confidence 99776 7999999988888775 12 2699999999999999999999986421 122221111111000234789
Q ss_pred EEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEEEcCceeEEEEec------------
Q 016820 208 LAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDVIWNSVVLEAYGE------------ 270 (382)
Q Consensus 208 v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~~~~~~v~~i~~~------------ 270 (382)
++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||++++++.+.+++.+
T Consensus 154 vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~ 233 (565)
T 3ntd_A 154 ATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGE 233 (565)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTC
T ss_pred EEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccccccccc
Confidence 99999999999999999999999999999887632 1222345677899999999999999874
Q ss_pred ------CCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccC
Q 016820 271 ------GDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQ 343 (382)
Q Consensus 271 ------~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~ 343 (382)
.++. +.+.. .++.++++|.|++|+|++|++.++. .++.++++|++.||+ +++|+.|+|||+|||+
T Consensus 234 ~~~~~~~~~~----~~v~~---~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~-~~~t~~~~IyA~GD~~ 305 (565)
T 3ntd_A 234 DTAHQHIKGH----LSLTL---SNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNA-MMQTSDPAIYAVGDAV 305 (565)
T ss_dssp CCTTCCTTCE----EEEEE---TTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCT-TCBCSSTTEEECGGGB
T ss_pred ccccccCCCc----EEEEE---cCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECC-CcccCCCCEEEeeeeE
Confidence 2221 33333 2235799999999999999988765 478888999999998 7889999999999998
Q ss_pred Cc---------hhhHHHHHHhhHHHHHHHHH
Q 016820 344 DK---------KYRQAVTAAGTGCMAALEAE 365 (382)
Q Consensus 344 ~~---------~~~~~~~a~~~g~~aa~~i~ 365 (382)
.. .++.++.|..||+.+|.+|.
T Consensus 306 ~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 306 EEQDFVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp CEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred eeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 31 13578999999999999997
No 58
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=8.1e-36 Score=289.62 Aligned_cols=290 Identities=20% Similarity=0.272 Sum_probs=209.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcC---CCeEEEecccCCCCCCCcceecCCCcc-cCCCCCCCCChHHHHHHHHHHHHHc
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAE---LKPILFEGWMANDIAPGGQLTTTSDVE-NFPGFPQGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g---~~v~lie~~~~~~~~~gg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
.+||+|||||++|+++|..|++.| .+|+|||+.. ..+.... ... ...+. .....++.....+.+++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~----~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 105 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS----NISFLGA---GMALWIGEQ--IAGPEGLFYSDKEELESL 105 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS----CCSBCGG---GHHHHHTTS--SSCSGGGBSCCHHHHHHT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC----CCCcccc---ccchhhcCc--cCCHHHhhhcCHHHHHhC
Confidence 489999999999999999999998 9999999632 1111000 000 00000 001111222223445678
Q ss_pred CcEEEEe-eEEEEEecCCcEEEEEC--CeEEEcCEEEEccCCCCcCCCCCCCc------ccc--CCCccee------eec
Q 016820 134 GTQIFTE-TVSKVDFKSRPFKVFTD--SKSVLADTVIVATGAVAKKLQFPGSD------AFW--NRGISAC------AVC 196 (382)
Q Consensus 134 gi~~~~~-~v~~i~~~~~~~~v~~~--~~~~~~d~lvlA~G~~~~~~~~~g~~------~~~--~~~~~~~------~~~ 196 (382)
+++++.+ +|..++.+++.+.+..+ +.++.||+||+|||++|+.|++||.+ .|. ...+..+ ...
T Consensus 106 gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~ 185 (490)
T 2bc0_A 106 GAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADV 185 (490)
T ss_dssp TCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHH
T ss_pred CCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHH
Confidence 9999777 69999988887777522 24699999999999999999999876 111 1112211 111
Q ss_pred cCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---h---HHHHHHhccCCCcEEEcCceeEEEEec
Q 016820 197 DGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---S---KIMQNRALTNPKIDVIWNSVVLEAYGE 270 (382)
Q Consensus 197 ~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---~---~~~~~~~l~~~gv~~~~~~~v~~i~~~ 270 (382)
........+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . .....+.+++.||++++++++.+++.+
T Consensus 186 ~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 265 (490)
T 2bc0_A 186 IAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGN 265 (490)
T ss_dssp HHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECS
T ss_pred HHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC
Confidence 1110014589999999999999999999999999999999887632 1 122346678899999999999999874
Q ss_pred CCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCch----
Q 016820 271 GDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKK---- 346 (382)
Q Consensus 271 ~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~---- 346 (382)
+. +..+.+ + + .++++|.|++|+|++|++++++..+.++++|++.||+ +++|+.|+|||+|||+...
T Consensus 266 ~~---v~~v~~-~---g--~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~~G~I~Vd~-~~~t~~~~IyA~GD~~~~~~~~~ 335 (490)
T 2bc0_A 266 GK---VEKIIT-D---K--NEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLVNK-RQETSIPGVYAIGDCATIYDNAT 335 (490)
T ss_dssp SS---CCEEEE-S---S--CEEECSEEEECCCEEECCGGGTTCSCBCTTSCBCCCT-TCBCSSTTEEECGGGBCEEETTT
T ss_pred Cc---EEEEEE-C---C--cEEECCEEEECCCCCcChHHHHhhhccCCCCCEEECC-CcccCCCCEEEeeeeEEeccccC
Confidence 32 222333 1 3 4799999999999999999876336677899999999 7899999999999999742
Q ss_pred -----hhHHHHHHhhHHHHHHHHHH
Q 016820 347 -----YRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 347 -----~~~~~~a~~~g~~aa~~i~~ 366 (382)
+..+..|..||+.+|.+|..
T Consensus 336 g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 336 RDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp TEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CceeecccHHHHHHHHHHHHHHhcC
Confidence 35789999999999999973
No 59
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.7e-35 Score=283.18 Aligned_cols=286 Identities=19% Similarity=0.256 Sum_probs=213.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc---------------cCCCC-----CCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE---------------NFPGF-----PQG 116 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~---------------~~~~~-----~~~ 116 (382)
..+||+|||||++|+++|+.|++.|++|+|||+ ..+||.|....+.. .++.+ ...
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-----~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 78 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-----FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESR 78 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-----SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCE
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-----CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 358999999999999999999999999999994 35777654321100 01111 011
Q ss_pred CChH-----------HHHHHHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCc-CCCCCCCcc
Q 016820 117 ILGG-----------DLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAK-KLQFPGSDA 184 (382)
Q Consensus 117 ~~~~-----------~~~~~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~-~~~~~g~~~ 184 (382)
.... .+...+...+++.+++++.+++..++. ..+.+..++..+.||++|+|||++|. .|+++|.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~ 156 (463)
T 4dna_A 79 FDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGP--NTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHEL 156 (463)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSS--SEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC--CEEEEecCCeEEEeCEEEEecCCCcccCCCCCCccc
Confidence 2233 233334455566799999998777652 33333225677999999999999999 899998764
Q ss_pred ccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEEE
Q 016820 185 FWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDVI 259 (382)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~~ 259 (382)
.+ ........ ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+.+.. ......+.+++.||+++
T Consensus 157 ~~-----~~~~~~~~--~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~ 229 (463)
T 4dna_A 157 CI-----TSNEAFDL--PALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRIL 229 (463)
T ss_dssp CB-----CHHHHTTC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred cc-----cHHHHhhh--hcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 21 11111122 33478999999999999999999999999999999886532 12223456788999999
Q ss_pred cCceeEEEEecCCceeeeeEEEE-eccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCCCc
Q 016820 260 WNSVVLEAYGEGDKKVLGGLKVK-NLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSVPG 335 (382)
Q Consensus 260 ~~~~v~~i~~~~~g~~~~~v~~~-~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~~~ 335 (382)
.++.+.+++.++++. +.+. . .++. +++|.|++|+|++|+..++ . .++.++++|++.||+ .++|+.||
T Consensus 230 ~~~~v~~i~~~~~~~----~~v~~~---~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~-~~~t~~~~ 300 (463)
T 4dna_A 230 CEDIIQSVSADADGR----RVATTM---KHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDA-FSRTSTPG 300 (463)
T ss_dssp CSCCEEEEEECTTSC----EEEEES---SSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCT-TCBCSSTT
T ss_pred CCCEEEEEEEcCCCE----EEEEEc---CCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECc-CCCCCCCC
Confidence 999999999876542 2333 2 2234 9999999999999999863 2 578888999999998 67899999
Q ss_pred eEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 336 VFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 336 vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|||+|||++ .++.++.|..||+.+|.+|..
T Consensus 301 iya~GD~~~-~~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 301 IYALGDVTD-RVQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp EEECSGGGS-SCCCHHHHHHHHHHHHHHHHS
T ss_pred EEEEEecCC-CCCChHHHHHHHHHHHHHHcC
Confidence 999999997 467899999999999999973
No 60
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.1e-35 Score=283.57 Aligned_cols=285 Identities=19% Similarity=0.228 Sum_probs=201.1
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc---------------c--CCCCC--CCCC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE---------------N--FPGFP--QGIL 118 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~---------------~--~~~~~--~~~~ 118 (382)
++||+|||||++|+++|..|++.|++|+|||+. ..||.|....+.. . ..++. ....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-----~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 76 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-----RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFN 76 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-----STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCC
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-----CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccC
Confidence 479999999999999999999999999999953 3677654321100 0 00111 1233
Q ss_pred hHHHH-----------HHHHHHHHHcCcEEEEeeEEEEEecCCcEEEEE------------CCeEEEcCEEEEccCCCCc
Q 016820 119 GGDLM-----------DRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT------------DSKSVLADTVIVATGAVAK 175 (382)
Q Consensus 119 ~~~~~-----------~~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~------------~~~~~~~d~lvlA~G~~~~ 175 (382)
..++. ..+.+.+++.+++++.+++..++. +.+.+.. ++.++.||+||+|||++|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~ 154 (500)
T 1onf_A 77 LPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPV 154 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC----------------------------CBSSEEECCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCC
Confidence 33332 233445567899999987666553 3455532 1346899999999999999
Q ss_pred CCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHh
Q 016820 176 KLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRA 250 (382)
Q Consensus 176 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~ 250 (382)
.|++||.+.. ..+...... .. +++++|||+|.+|+|+|..|.++|.+|+++++.+.+.. ......+.
T Consensus 155 ~p~i~G~~~~-----~~~~~~~~~--~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~ 226 (500)
T 1onf_A 155 FPPVKGIENT-----ISSDEFFNI--KE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLEND 226 (500)
T ss_dssp CCSCTTGGGC-----EEHHHHTTC--CC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHH
T ss_pred CCCCCCCCcc-----cCHHHHhcc--CC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHH
Confidence 9999987421 111111122 12 78999999999999999999999999999999887532 12223466
Q ss_pred ccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEE-EecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCC
Q 016820 251 LTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSD-LKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKP 326 (382)
Q Consensus 251 l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~-~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~ 326 (382)
+++.||++++++++.+++.++++. ..+.+.+ + .+ +++|.|++++|++|+++.+ . .++.+ ++|++.||+
T Consensus 227 l~~~gv~i~~~~~v~~i~~~~~~~--~~v~~~~---g--~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~ 298 (500)
T 1onf_A 227 MKKNNINIVTFADVVEIKKVSDKN--LSIHLSD---G--RIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDE 298 (500)
T ss_dssp HHHTTCEEECSCCEEEEEESSTTC--EEEEETT---S--CEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECT
T ss_pred HHhCCCEEEECCEEEEEEEcCCce--EEEEECC---C--cEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECC
Confidence 778999999999999999865431 1233322 3 34 9999999999999999643 3 46777 789999999
Q ss_pred CCCcCCCCceEEecccCC---------------------------------chhhHHHHHHhhHHHHHHHHHH
Q 016820 327 GTTHTSVPGVFAAGDVQD---------------------------------KKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 327 ~~~~t~~~~vya~GD~~~---------------------------------~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
+++|+.|+|||+|||+. ..+..+..|+.||+.+|.||..
T Consensus 299 -~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 299 -NQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp -TCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred -CcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 67899999999999981 2456789999999999999974
No 61
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=4.5e-35 Score=284.30 Aligned_cols=291 Identities=21% Similarity=0.234 Sum_probs=210.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCC---------------cccCCCC--C---CC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSD---------------VENFPGF--P---QG 116 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~---------------~~~~~~~--~---~~ 116 (382)
..+||+|||||++|+++|..|+++|++|+|||+. ..||.|....+ ..+++.+ + ..
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-----~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~ 81 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-----AYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRIS 81 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-----CSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-----CCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCc
Confidence 3589999999999999999999999999999952 37877642111 0111111 1 12
Q ss_pred CChHHHHHHHHHHHHH-----------c-CcEEEEeeEEEEEecCCcEEEEE-CCeEEEcCEEEEccCCCCcCCCCCCCc
Q 016820 117 ILGGDLMDRCRNQSLR-----------F-GTQIFTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSD 183 (382)
Q Consensus 117 ~~~~~~~~~~~~~~~~-----------~-gi~~~~~~v~~i~~~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~~~~g~~ 183 (382)
....++.+++.+...+ . +++++.++....+ .. .+.. ++.++.||+||+|||++|..|++++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~--~~--~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~ 157 (492)
T 3ic9_A 82 VNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD--EH--TLQVDDHSQVIAKRIVIATGSRPNYPEFLAAA 157 (492)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE--TT--EEEETTTEEEEEEEEEECCCEECCCCHHHHTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec--CC--EEEEcCCcEEEeCEEEEccCCCCcCCCCCCcc
Confidence 3555555555443322 1 4556666655554 22 3444 566799999999999999988765532
Q ss_pred cccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCcEE
Q 016820 184 AFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKIDV 258 (382)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv~~ 258 (382)
. ..+..+...... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++. |++
T Consensus 158 ~---~~v~t~~~~~~~--~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i 231 (492)
T 3ic9_A 158 G---SRLLTNDNLFEL--NDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYF 231 (492)
T ss_dssp G---GGEECHHHHTTC--SSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEE
T ss_pred C---CcEEcHHHHhhh--hhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEE
Confidence 2 222223322333 34579999999999999999999999999999999987632 122223556666 999
Q ss_pred EcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCCCc
Q 016820 259 IWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSVPG 335 (382)
Q Consensus 259 ~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~~~ 335 (382)
++++.+.+++.++++ + .+.+.+ .+++..++++|.|++++|++|++.++ . .++.++++|++.||+.+++|+.|+
T Consensus 232 ~~~~~v~~i~~~~~~--v-~v~~~~-~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~ 307 (492)
T 3ic9_A 232 DAKARVISTIEKEDA--V-EVIYFD-KSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDH 307 (492)
T ss_dssp ETTCEEEEEEECSSS--E-EEEEEC-TTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTT
T ss_pred EECCEEEEEEEcCCE--E-EEEEEe-CCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCC
Confidence 999999999987654 1 133331 12434689999999999999999874 3 578889999999994488999999
Q ss_pred eEEecccCCchhhHHHHHHhhHHHHHHHHHHH
Q 016820 336 VFAAGDVQDKKYRQAVTAAGTGCMAALEAEHY 367 (382)
Q Consensus 336 vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~ 367 (382)
|||+|||++. ++.++.|+.||+.+|.+|..+
T Consensus 308 IyA~GD~~~~-~~~~~~A~~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 308 IFVAGDANNT-LTLLHEAADDGKVAGTNAGAY 338 (492)
T ss_dssp EEECGGGGTS-SCSHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCC-CccHHHHHHHHHHHHHHHcCC
Confidence 9999999974 578899999999999999854
No 62
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=4.5e-36 Score=287.54 Aligned_cols=299 Identities=17% Similarity=0.157 Sum_probs=214.2
Q ss_pred cccEEEECCcHHHHHHHHHHHH---cCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAAR---AELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFG 134 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~---~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 134 (382)
.+||||||||++|+++|..|++ .|++|+|||+.. .+........+. .......++...+.+.+++.|
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~--------~~~~~~~~~~~~--~g~~~~~~~~~~l~~~~~~~g 73 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND--------YFQFVPSNPWVG--VGWKERDDIAFPIRHYVERKG 73 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS--------EEECGGGHHHHH--HTSSCHHHHEEECHHHHHTTT
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC--------CCcccCCccccc--cCccCHHHHHHHHHHHHHHCC
Confidence 3699999999999999999999 799999999531 111000000000 012345666667788888899
Q ss_pred cEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccccCC-----CcceeeeccC-CCCCCCCCcE
Q 016820 135 TQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNR-----GISACAVCDG-AAPIFRDKPL 208 (382)
Q Consensus 135 i~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~-----~~~~~~~~~~-~~~~~~~~~v 208 (382)
++++.++|+.++.+++.+.+. ++.++.||+||+|+|++|+.+.+||.+..... .......... ......++++
T Consensus 74 v~~~~~~v~~id~~~~~V~~~-~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 152 (437)
T 3sx6_A 74 IHFIAQSAEQIDAEAQNITLA-DGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGP 152 (437)
T ss_dssp CEEECSCEEEEETTTTEEEET-TSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeEEEEEEcCCCEEEEC-CCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCE
Confidence 999988999999887744432 34569999999999999999999998753211 1111111100 0001113457
Q ss_pred EEEcCCch----H--HHHH----HHHhhcCCE-----EEEEEeCCCC--------cchHHHHHHhccCCCcEEEcCceeE
Q 016820 209 AVIGGGDS----A--MEEA----NFLTKYGSK-----VYIIHRRDSF--------RASKIMQNRALTNPKIDVIWNSVVL 265 (382)
Q Consensus 209 ~VvG~G~~----a--~e~a----~~l~~~g~~-----v~~~~~~~~~--------~~~~~~~~~~l~~~gv~~~~~~~v~ 265 (382)
+|||+|+. | +|+| ..+.+.|.+ |+++++.+.+ .......++.+++.||+++.++.+.
T Consensus 153 vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~ 232 (437)
T 3sx6_A 153 IVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVT 232 (437)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEE
T ss_pred EEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 88998654 3 7777 555566754 9999998865 1234444577888999999999999
Q ss_pred EEEecCCceeeeeEEEEecc-CCc---eEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcC-CCCceEEe
Q 016820 266 EAYGEGDKKVLGGLKVKNLV-TGQ---VSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHT-SVPGVFAA 339 (382)
Q Consensus 266 ~i~~~~~g~~~~~v~~~~~~-~~~---~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t-~~~~vya~ 339 (382)
+++.+. +.+.+.. +++ +.++++|.+++++|++++..+.. .++ .+++|++.||+ ++++ ++|||||+
T Consensus 233 ~v~~~~-------v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl-~~~~G~i~Vd~-~l~t~~~~~Ifa~ 303 (437)
T 3sx6_A 233 KVEDNK-------MYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDE-HQRSKKYANIFAA 303 (437)
T ss_dssp EEETTE-------EEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT-BCTTSCBCBCT-TSBBSSCTTEEEC
T ss_pred EEECCe-------EEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc-cCCCCcEEeCh-hccCCCCCCEEEE
Confidence 998653 5554321 121 57899999999999998876654 355 67899999999 5666 89999999
Q ss_pred cccCCc-----------hhhHHHHHHhhHHHHHHHHHHHHHHccCccc
Q 016820 340 GDVQDK-----------KYRQAVTAAGTGCMAALEAEHYLQEIGSQED 376 (382)
Q Consensus 340 GD~~~~-----------~~~~~~~a~~~g~~aa~~i~~~l~~~~~~~~ 376 (382)
|||+.. .++++..|+.||+.+|.||..+|.++++.++
T Consensus 304 GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~~ 351 (437)
T 3sx6_A 304 GIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQT 351 (437)
T ss_dssp GGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCCC
T ss_pred EEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 999863 2678999999999999999999999876653
No 63
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=5.6e-36 Score=297.33 Aligned_cols=292 Identities=20% Similarity=0.224 Sum_probs=216.9
Q ss_pred cccccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecCCCccc-CCCCCCCCChHHHHHHHHHHHHH
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTTSDVEN-FPGFPQGILGGDLMDRCRNQSLR 132 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 132 (382)
+.+++|+|||||++|+++|..|++. |++|+|||+.. ..+. ... .... +.+. .......+..++.++.++
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~----~~~~--~~~-~lp~~~~g~-~~~~~~~~~~~~~~~~~~ 105 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE----YISF--ANC-GLPYYIGGV-ITERQKLLVQTVERMSKR 105 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS----CSSB--CGG-GHHHHHTTS-SCCGGGGBSSCHHHHHHH
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC----Cccc--cCC-CCchhhcCc-CCChHHhhccCHHHHHHh
Confidence 3457999999999999999999999 89999999532 2210 000 0000 0111 001122345567777788
Q ss_pred cCcEEEEe-eEEEEEecCCcEEEEE--CCe--EEEcCEEEEccCCCCcCCCCCCCcc----ccCCCcceeeeccCCCCCC
Q 016820 133 FGTQIFTE-TVSKVDFKSRPFKVFT--DSK--SVLADTVIVATGAVAKKLQFPGSDA----FWNRGISACAVCDGAAPIF 203 (382)
Q Consensus 133 ~gi~~~~~-~v~~i~~~~~~~~v~~--~~~--~~~~d~lvlA~G~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~ 203 (382)
++++++.+ +|+.++.+++.+.+.. ++. .+.||+||+|||++|+.|++||.+. +..+....+..........
T Consensus 106 ~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~ 185 (588)
T 3ics_A 106 FNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEK 185 (588)
T ss_dssp TTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHH
T ss_pred cCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhc
Confidence 89999876 7999999988888764 344 6899999999999999999998732 1122222221111110013
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcch-----HHHHHHhccCCCcEEEcCceeEEEEecCCceeeee
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRAS-----KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGG 278 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~-----~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~ 278 (382)
.+++++|||+|.+|+|+|..|.+.|.+|+++.+.+.+... .....+.+++.||+++.++.+.+++.++++
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~----- 260 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAV----- 260 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE-----
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE-----
Confidence 4789999999999999999999999999999998876331 222346677899999999999999886542
Q ss_pred EEEEeccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc---------hhh
Q 016820 279 LKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK---------KYR 348 (382)
Q Consensus 279 v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~---------~~~ 348 (382)
+.+.+ + .++++|.|++|+|++|++.+++ .++.++++|++.||+ +++|+.|+|||+|||+.. .++
T Consensus 261 v~~~~---g--~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~ 334 (588)
T 3ics_A 261 VRLKS---G--SVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNE-KFQTSDPHIYAIGDAIEVKDFVTETETMIP 334 (588)
T ss_dssp EEETT---S--CEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCT-TSBCSSTTEEECGGGBCEEBTTTCCEECCC
T ss_pred EEECC---C--CEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECC-ccccCCCCEEEeeeeeecccccCCcccccc
Confidence 55533 3 5799999999999999998775 578888899999998 789999999999999841 146
Q ss_pred HHHHHHhhHHHHHHHHHH
Q 016820 349 QAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 349 ~~~~a~~~g~~aa~~i~~ 366 (382)
.++.|..||+.+|.+|..
T Consensus 335 ~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 335 LAWPANRQGRMLADIIHG 352 (588)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHhcC
Confidence 889999999999999873
No 64
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=1.5e-34 Score=278.39 Aligned_cols=278 Identities=21% Similarity=0.217 Sum_probs=210.6
Q ss_pred ccEEEECCcHHHHHHHHHHHH---cCCC---eEEEecccCCCCCCCcceecCCC-------------------------c
Q 016820 59 TKVCIIGSGPAAHTAAIYAAR---AELK---PILFEGWMANDIAPGGQLTTTSD-------------------------V 107 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~---~g~~---v~lie~~~~~~~~~gg~~~~~~~-------------------------~ 107 (382)
+||+|||||++|+++|..|++ .|++ |+||| +...+||.|..... .
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E----~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~ 78 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFE----KQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKEC 78 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEEC----SSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEE----cCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhh
Confidence 689999999999999999999 9999 99999 44556776653210 0
Q ss_pred ccCCCC----------CCCCChHHHHHHHHHHHHHcCcE--EEEe-eEEEEEecCC--cEEEEEC----C--eEEEcCEE
Q 016820 108 ENFPGF----------PQGILGGDLMDRCRNQSLRFGTQ--IFTE-TVSKVDFKSR--PFKVFTD----S--KSVLADTV 166 (382)
Q Consensus 108 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~gi~--~~~~-~v~~i~~~~~--~~~v~~~----~--~~~~~d~l 166 (382)
..++.+ +..+...++.++++++++++++. ++.+ +|+.++.+++ .|.+... + .++.||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~V 158 (464)
T 2xve_A 79 LEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYV 158 (464)
T ss_dssp TCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEE
T ss_pred cccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEE
Confidence 011111 23456688999999999999987 7666 7999988766 5666543 2 46899999
Q ss_pred EEccC--CCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchH
Q 016820 167 IVATG--AVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASK 244 (382)
Q Consensus 167 vlA~G--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~ 244 (382)
|+||| +.|+.|.+||.+.+....++...+.+.. ...+++|+|||+|.+|+|+|..|.+.+++|+++.+++.+....
T Consensus 159 VvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~--~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~ 236 (464)
T 2xve_A 159 VCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDAL--EFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYK 236 (464)
T ss_dssp EECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGG--GGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCC
T ss_pred EECCCCCCCCccCCCCCcccCCceEEehhhhCCHh--HcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCC
Confidence 99999 7899999999877655556655554443 4568999999999999999999999999999999987653211
Q ss_pred HHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhcc--cccccCCCce
Q 016820 245 IMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVDG--QLDLHSDGYI 322 (382)
Q Consensus 245 ~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~--~~~~~~~g~i 322 (382)
+ ..||+++ ..|.+++.+ + |.+.+ + ..+++|.||+|||++|+.+++.. ++..+++|++
T Consensus 237 ------~-~~~V~~~--~~V~~i~~~--~-----V~~~d---G--~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v 295 (464)
T 2xve_A 237 ------W-PENWDER--PNLVRVDTE--N-----AYFAD---G--SSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP 295 (464)
T ss_dssp ------C-CTTEEEC--SCEEEECSS--E-----EEETT---S--CEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC
T ss_pred ------C-CCceEEc--CCeEEEeCC--E-----EEECC---C--CEEeCCEEEECCCCCCCCCCcCcccccccCCCccc
Confidence 1 3588876 678888643 1 66653 4 46899999999999999998863 4555555565
Q ss_pred -eeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHH
Q 016820 323 -ITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAE 365 (382)
Q Consensus 323 -~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~ 365 (382)
....+.++|+.|+||++||+... .....|..||+.+|.++.
T Consensus 296 ~~~~~~~~~t~~p~i~aiGd~~~~--~~~~~a~~qa~~~a~~l~ 337 (464)
T 2xve_A 296 LNLYKGVVWEDNPKFFYIGMQDQW--YSFNMFDAQAWYARDVIM 337 (464)
T ss_dssp SSEETTTEESSSTTEEECSCSCCS--SCHHHHHHHHHHHHHHHT
T ss_pred ccccceEecCCCCCEEEEeCcccc--cchHHHHHHHHHHHHHHc
Confidence 23344567899999999999863 356778888888888775
No 65
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=4.7e-35 Score=281.92 Aligned_cols=286 Identities=21% Similarity=0.218 Sum_probs=210.2
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc----------------cCCCCC---CCCCh
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE----------------NFPGFP---QGILG 119 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~----------------~~~~~~---~~~~~ 119 (382)
+||+|||||++|+++|..|++.|++|+||| +...+||.+....... ...+++ .....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie----~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~ 77 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVE----KEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDL 77 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEE----SSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEe----CCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCH
Confidence 799999999999999999999999999999 4445677654221100 000110 01222
Q ss_pred HHHHH-----------HHHHHHHHcCcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccccCC
Q 016820 120 GDLMD-----------RCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNR 188 (382)
Q Consensus 120 ~~~~~-----------~~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~ 188 (382)
.++.. .+.+.+++.+++++.+++..++ .+.+.+.+++.++.||+||+|||++|..|+++|.+. .
T Consensus 78 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~--~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~---~ 152 (455)
T 2yqu_A 78 PALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLS--ERKVLVEETGEELEARYILIATGSAPLIPPWAQVDY---E 152 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCS---S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEec--CCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCc---C
Confidence 33322 2345566779999998765543 445555434567999999999999999888887543 1
Q ss_pred CcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc------hHHHHHHhccCCCcEEEcCc
Q 016820 189 GISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA------SKIMQNRALTNPKIDVIWNS 262 (382)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~l~~~gv~~~~~~ 262 (382)
.+......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ...+ .+.+++.||+++.++
T Consensus 153 ~v~~~~~~~~~--~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l-~~~l~~~Gv~i~~~~ 229 (455)
T 2yqu_A 153 RVVTSTEALSF--PEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAA-ERVFKKQGLTIRTGV 229 (455)
T ss_dssp SEECHHHHTCC--SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHH-HHHHHHHTCEEECSC
T ss_pred cEechHHhhcc--ccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHH-HHHHHHCCCEEEECC
Confidence 11111111112 23468999999999999999999999999999999887532 2223 455677899999999
Q ss_pred eeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCCCceEEe
Q 016820 263 VVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSVPGVFAA 339 (382)
Q Consensus 263 ~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~~~vya~ 339 (382)
++.+++.++++ +.+.. .++.++++|.+++|+|.+|+..++ + .++.++++|++.||+ .++|+.|+||++
T Consensus 230 ~V~~i~~~~~~-----v~v~~---~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~-~~~t~~~~iya~ 300 (455)
T 2yqu_A 230 RVTAVVPEAKG-----ARVEL---EGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDE-HLRTRVPHIYAI 300 (455)
T ss_dssp CEEEEEEETTE-----EEEEE---TTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCT-TSBCSSTTEEEC
T ss_pred EEEEEEEeCCE-----EEEEE---CCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECC-CcccCCCCEEEE
Confidence 99999987653 44443 223579999999999999998763 3 467777789999999 688999999999
Q ss_pred cccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 340 GDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 340 GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|||+.. ++.+..|..||+.+|.+|..
T Consensus 301 GD~~~~-~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 301 GDVVRG-PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp GGGSSS-CCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCC-ccCHHHHHHhHHHHHHHHcC
Confidence 999974 57888999999999999985
No 66
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.5e-36 Score=279.56 Aligned_cols=279 Identities=23% Similarity=0.222 Sum_probs=201.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
..||+|||||+||+++|..|++.| +|+|||+.. ..+. . ......+ .......+++..+..+.+++.++++
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~----~~~~--~-~~~l~~~--~~g~~~~~~~~~~~~~~~~~~~v~~ 77 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEP----VPYY--S-KPMLSHY--IAGFIPRNRLFPYSLDWYRKRGIEI 77 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSS----SCCC--C-STTHHHH--HTTSSCGGGGCSSCHHHHHHHTEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCC----CCcc--c-cchhHHH--HhCCCCHHHhccCCHHHHHhCCcEE
Confidence 368999999999999999999999 999999632 1110 0 0000000 0011223333333445567789999
Q ss_pred EEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccc-cCCCcceeeeccCCCCCCCCCcEEEEcCCc
Q 016820 138 FTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAF-WNRGISACAVCDGAAPIFRDKPLAVIGGGD 215 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~ 215 (382)
+.+ +|+.++++...+. .++.++.||+||+|||++|+.|++||.+.. ..+........... ...+++++|||+|.
T Consensus 78 ~~g~~v~~id~~~~~V~--~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~--~~~~~~vvViGgG~ 153 (367)
T 1xhc_A 78 RLAEEAKLIDRGRKVVI--TEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKES--IENSGEAIIIGGGF 153 (367)
T ss_dssp ECSCCEEEEETTTTEEE--ESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHH--HHHHSEEEEEECSH
T ss_pred EECCEEEEEECCCCEEE--ECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHH--hhcCCcEEEECCCH
Confidence 998 6999998765443 566789999999999999999999984321 11122111111111 11358999999999
Q ss_pred hHHHHHHHHhhcCCEEEEEEeCCCCcc----hHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEE
Q 016820 216 SAMEEANFLTKYGSKVYIIHRRDSFRA----SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSD 291 (382)
Q Consensus 216 ~a~e~a~~l~~~g~~v~~~~~~~~~~~----~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~ 291 (382)
+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||++++++++.+++.+ .+.+++ +.
T Consensus 154 ~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-------~v~~~~-----g~- 220 (367)
T 1xhc_A 154 IGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLNSELLEANEE-------GVLTNS-----GF- 220 (367)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEEECSCCEEEECSS-------EEEETT-----EE-
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHCCCEEEcCCEEEEEEee-------EEEECC-----CE-
Confidence 999999999999999999999887532 1222345677889999999999999832 155532 34
Q ss_pred EecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc---hhhHHHHHHhhHHHHHHHHHH
Q 016820 292 LKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK---KYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 292 ~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~---~~~~~~~a~~~g~~aa~~i~~ 366 (382)
+++|.+++++|++|++.+++ .++..+ + ++.||+ +++|+.|||||+|||+.. .++.+..|..||+.+|.+|..
T Consensus 221 i~~D~vi~a~G~~p~~~ll~~~gl~~~-~-gi~Vd~-~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 296 (367)
T 1xhc_A 221 IEGKVKICAIGIVPNVDLARRSGIHTG-R-GILIDD-NFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKG 296 (367)
T ss_dssp EECSCEEEECCEEECCHHHHHTTCCBS-S-SEECCT-TSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTT
T ss_pred EEcCEEEECcCCCcCHHHHHhCCCCCC-C-CEEECC-CcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcC
Confidence 99999999999999998765 456554 3 499998 788999999999999742 246889999999999999973
No 67
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=7.8e-37 Score=287.20 Aligned_cols=274 Identities=19% Similarity=0.194 Sum_probs=202.6
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCc-ceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcC
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGG-QLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFG 134 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 134 (382)
.++.+|||||||+||+++|..|...+.+|+|||++ ...+. ....+ .+ +......+++..+..+++++++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~----~~~~y~~~~l~----~~--l~g~~~~~~l~~~~~~~~~~~~ 76 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSE----KYLPYYRPRLN----EI--IAKNKSIDDILIKKNDWYEKNN 76 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSS----SSCCBCGGGHH----HH--HHSCCCGGGTBSSCHHHHHHTT
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECC----CCCCcccChhh----HH--HcCCCCHHHccCCCHHHHHHCC
Confidence 35689999999999999999998789999999953 22221 10000 00 0011223344445556667889
Q ss_pred cEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCcc-ccCCCcceeeeccCCCCCCCCCcEEEEc
Q 016820 135 TQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDA-FWNRGISACAVCDGAAPIFRDKPLAVIG 212 (382)
Q Consensus 135 i~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~v~VvG 212 (382)
++++.+ +|+.|+++++.+++. ++.++.||+||+|||++|+.|++||.+. +..+........... ...+++++|||
T Consensus 77 i~~~~~~~V~~id~~~~~v~~~-~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~--l~~~~~vvVIG 153 (385)
T 3klj_A 77 IKVITSEFATSIDPNNKLVTLK-SGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDE--CKNKGKAFIIG 153 (385)
T ss_dssp CEEECSCCEEEEETTTTEEEET-TSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHH--HHHHSCEEEEC
T ss_pred CEEEeCCEEEEEECCCCEEEEC-CCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHH--hhcCCeEEEEC
Confidence 999988 799999988755443 4567999999999999999999999762 111222222111111 12268999999
Q ss_pred CCchHHHHHHHHhhcCCEEEEEEeCCCCcch------HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccC
Q 016820 213 GGDSAMEEANFLTKYGSKVYIIHRRDSFRAS------KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVT 286 (382)
Q Consensus 213 ~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~ 286 (382)
+|.+|+|+|..|.+.|.+|+++++.+.+... ....++.+++.||+++.+..+.++
T Consensus 154 gG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------------- 214 (385)
T 3klj_A 154 GGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------------- 214 (385)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------------
T ss_pred CCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------------
Confidence 9999999999999999999999998876321 223356678899999998877554
Q ss_pred CceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCc---hhhHHHHHHhhHHHHHH
Q 016820 287 GQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK---KYRQAVTAAGTGCMAAL 362 (382)
Q Consensus 287 ~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~---~~~~~~~a~~~g~~aa~ 362 (382)
+.++++|.|++++|++|++.++. .++..+ +.+.||+ +++|+.|+|||+|||+.. .++.+..|..||+.+|.
T Consensus 215 --g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~--~gi~vd~-~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~ 289 (385)
T 3klj_A 215 --GDLIRSSCVITAVGVKPNLDFIKDTEIASK--RGILVND-HMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGL 289 (385)
T ss_dssp --HHHHHHSEEEECCCEEECCGGGTTSCCCBS--SSEEECT-TCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHH
T ss_pred --CeEEecCeEEECcCcccChhhhhhcCCCcC--CCEEECC-CcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHH
Confidence 13588999999999999998876 355554 4499998 788999999999999863 25688999999999999
Q ss_pred HHHH
Q 016820 363 EAEH 366 (382)
Q Consensus 363 ~i~~ 366 (382)
+|..
T Consensus 290 ~i~g 293 (385)
T 3klj_A 290 NACG 293 (385)
T ss_dssp HHTT
T ss_pred HhcC
Confidence 9974
No 68
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=7.7e-35 Score=278.15 Aligned_cols=287 Identities=17% Similarity=0.171 Sum_probs=203.9
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC--CeEEEecccCCCCCCCc-ceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcC
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL--KPILFEGWMANDIAPGG-QLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFG 134 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~--~v~lie~~~~~~~~~gg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 134 (382)
.+||+|||||++|+++|..|++.|. +|+|||+.. .... ...... .+.. ......++.....+.+++.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~----~~~~~~~~l~~---~~~~--~~~~~~~~~~~~~~~~~~~g 74 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT----VIPHHLPPLSK---AYLA--GKATAESLYLRTPDAYAAQN 74 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC----SCCBCSGGGGT---TTTT--TCSCSGGGBSSCHHHHHHTT
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC----CCCCcCCCCcH---HHhC--CCCChHHhcccCHHHHHhCC
Confidence 4799999999999999999999998 799999531 1111 000000 0100 00111122112234456789
Q ss_pred cEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCcccc------CCCcceeeeccCCCCCCCCCc
Q 016820 135 TQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFW------NRGISACAVCDGAAPIFRDKP 207 (382)
Q Consensus 135 i~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~ 207 (382)
++++.+ +|..++.+++.+.+. ++.++.||+||+|||++|+.|++||.+... .+....+...... ...+++
T Consensus 75 v~~~~~~~v~~i~~~~~~v~~~-~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~--l~~~~~ 151 (431)
T 1q1r_A 75 IQLLGGTQVTAINRDRQQVILS-DGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQ--LIADNR 151 (431)
T ss_dssp EEEECSCCEEEEETTTTEEEET-TSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHT--CCTTCE
T ss_pred CEEEeCCEEEEEECCCCEEEEC-CCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHH--hhcCCe
Confidence 999988 689999876644432 455799999999999999999998865211 1122222122222 335799
Q ss_pred EEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---h---HHHHHHhccCCCcEEEcCceeEEEEe--cCCceeeeeE
Q 016820 208 LAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---S---KIMQNRALTNPKIDVIWNSVVLEAYG--EGDKKVLGGL 279 (382)
Q Consensus 208 v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---~---~~~~~~~l~~~gv~~~~~~~v~~i~~--~~~g~~~~~v 279 (382)
++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . .....+.+++.||++++++.+.+++. ++++ +..+
T Consensus 152 vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~--v~~v 229 (431)
T 1q1r_A 152 LVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQK--VTAV 229 (431)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCC--EEEE
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCc--EEEE
Confidence 99999999999999999999999999999876532 1 12234567778999999999999987 3332 3334
Q ss_pred EEEeccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCchh---------hH
Q 016820 280 KVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKY---------RQ 349 (382)
Q Consensus 280 ~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~---------~~ 349 (382)
.+.+ + ..+++|.|++++|.+|++.++. .++..+ +| +.||+ +++|+.|+|||+|||+..+. ..
T Consensus 230 ~~~~---G--~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~-~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~ 301 (431)
T 1q1r_A 230 LCED---G--TRLPADLVIAGIGLIPNCELASAAGLQVD-NG-IVINE-HMQTSDPLIMAVGDCARFHSQLYDRWVRIES 301 (431)
T ss_dssp EETT---S--CEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EECCT-TSBCSSTTEEECGGGEEEEETTTTEEEECCS
T ss_pred EeCC---C--CEEEcCEEEECCCCCcCcchhhccCCCCC-CC-EEECC-CcccCCCCEEEEEeEEEEccccCCceEeeCH
Confidence 4432 3 5799999999999999988776 456664 44 99998 78899999999999986431 25
Q ss_pred HHHHHhhHHHHHHHHHH
Q 016820 350 AVTAAGTGCMAALEAEH 366 (382)
Q Consensus 350 ~~~a~~~g~~aa~~i~~ 366 (382)
+..|..||+.+|.+|..
T Consensus 302 ~~~A~~qg~~aa~~i~g 318 (431)
T 1q1r_A 302 VPNALEQARKIAAILCG 318 (431)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 78899999999999963
No 69
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=6.1e-35 Score=277.00 Aligned_cols=279 Identities=18% Similarity=0.222 Sum_probs=200.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC--CeEEEecccCCCCCCCcc-eecCCCcccCCCCCCCCChHHHHHHHHHHHHHc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL--KPILFEGWMANDIAPGGQ-LTTTSDVENFPGFPQGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~--~v~lie~~~~~~~~~gg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
..+||+|||||++|+++|..|++.|. +|+|||+.. ..+.. ........ .+ .. .+++ ++. .+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~----~~~~~~~~~~~~~~--~~---~~-~~~~--~~~-~~~~~ 72 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA----ERPYDRPPLSKDFM--AH---GD-AEKI--RLD-CKRAP 72 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC----SCCBCSGGGGTHHH--HH---CC-GGGS--BCC-CTTSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC----CCcccCCCCCHHHh--CC---Cc-hhhh--hHH-HHHHC
Confidence 45799999999999999999999998 499999531 11100 00000000 00 00 0000 011 34567
Q ss_pred CcEEEEee-EEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCC-CCCcc--ccCCCcceeeeccCCCCCCCCCcEE
Q 016820 134 GTQIFTET-VSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQF-PGSDA--FWNRGISACAVCDGAAPIFRDKPLA 209 (382)
Q Consensus 134 gi~~~~~~-v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~-~g~~~--~~~~~~~~~~~~~~~~~~~~~~~v~ 209 (382)
+++++.++ |+.++.+.+.+.+. ++.++.||+||+|||++|+.|++ ||.+. +..+........... ...+++++
T Consensus 73 ~v~~~~~~~v~~i~~~~~~v~~~-~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~--~~~~~~vv 149 (408)
T 2gqw_A 73 EVEWLLGVTAQSFDPQAHTVALS-DGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAG--LRPQSRLL 149 (408)
T ss_dssp SCEEEETCCEEEEETTTTEEEET-TSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTT--CCTTCEEE
T ss_pred CCEEEcCCEEEEEECCCCEEEEC-CCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHH--hhcCCeEE
Confidence 99999994 99999876544432 45579999999999999999988 88652 111222222222222 33579999
Q ss_pred EEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---h---HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEe
Q 016820 210 VIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---S---KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKN 283 (382)
Q Consensus 210 VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---~---~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~ 283 (382)
|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . .....+.+++.||+++.++++.+++ ++ .+++.+
T Consensus 150 ViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~------~v~~~~ 222 (408)
T 2gqw_A 150 IVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-DG------VVLLDD 222 (408)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-TT------EEEETT
T ss_pred EECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-CC------EEEECC
Confidence 999999999999999999999999999887632 1 2223456778899999999999998 32 265543
Q ss_pred ccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCchh---------hHHHHH
Q 016820 284 LVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKY---------RQAVTA 353 (382)
Q Consensus 284 ~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~---------~~~~~a 353 (382)
+ .++++|.+++++|.+|++.++. .++..+ +| +.||+ +++|+.|+|||+|||+..+. ..+..|
T Consensus 223 ---g--~~i~~D~vi~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A 294 (408)
T 2gqw_A 223 ---G--TRIAADMVVVGIGVLANDALARAAGLACD-DG-IFVDA-YGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNA 294 (408)
T ss_dssp ---S--CEEECSEEEECSCEEECCHHHHHHTCCBS-SS-EECCT-TCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHH
T ss_pred ---C--CEEEcCEEEECcCCCccHHHHHhCCCCCC-CC-EEECC-CCccCCCCEEEEEEEEEecCccCCceeeccHHHHH
Confidence 3 5799999999999999988776 466665 45 99998 78899999999999986431 267899
Q ss_pred HhhHHHHHHHHHH
Q 016820 354 AGTGCMAALEAEH 366 (382)
Q Consensus 354 ~~~g~~aa~~i~~ 366 (382)
+.||+.+|.+|..
T Consensus 295 ~~~g~~aa~~i~g 307 (408)
T 2gqw_A 295 QNQGIAVARHLVD 307 (408)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999974
No 70
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=8.8e-35 Score=279.40 Aligned_cols=289 Identities=22% Similarity=0.245 Sum_probs=207.2
Q ss_pred ccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecCCCcccC-CCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 59 TKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTTSDVENF-PGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
+||+|||||++|+++|..|+++ |.+|+|||+.. ..+.. ......+ .+. .....++..++.+.+++.|+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~----~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~gv 71 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD----FISFL---SAGMQLYLEGK--VKDVNSVRYMTGEKMESRGV 71 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS----SSSBC---GGGHHHHHTTS--SCCGGGSBSCCHHHHHHTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC----ccCcc---cccchhhhcCc--cCCHHHhhcCCHHHHHHCCC
Confidence 4899999999999999999998 99999999632 22210 0000000 000 01122223333445567799
Q ss_pred EEEEe-eEEEEEecCCcEEEEE--CCe--EEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCCCCCCCc
Q 016820 136 QIFTE-TVSKVDFKSRPFKVFT--DSK--SVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAPIFRDKP 207 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~~~v~~--~~~--~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 207 (382)
+++.+ .+..++.+++.+.+.. ++. ++.||+||+|||++|+.|++||.+. +..+................+++
T Consensus 72 ~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~ 151 (447)
T 1nhp_A 72 NVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNN 151 (447)
T ss_dssp EEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCE
T ss_pred EEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCe
Confidence 99777 6889998888777765 233 4899999999999999999998753 11111111110111100115789
Q ss_pred EEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---h---HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEE
Q 016820 208 LAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---S---KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKV 281 (382)
Q Consensus 208 v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---~---~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~ 281 (382)
++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . .....+.+++.||++++++.+.+++.++. +..+.+
T Consensus 152 vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~---v~~v~~ 228 (447)
T 1nhp_A 152 VVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGR---VQKVVT 228 (447)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSB---CCEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCc---EEEEEE
Confidence 99999999999999999999999999999886532 1 12234567789999999999999987632 222332
Q ss_pred EeccCCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCch---------hhHHHH
Q 016820 282 KNLVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKK---------YRQAVT 352 (382)
Q Consensus 282 ~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~---------~~~~~~ 352 (382)
+ + .++++|.|++|+|.+|+..++...+.++++|++.||+ +++|+.|+|||+|||+... +..+..
T Consensus 229 -~---~--~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~-~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~ 301 (447)
T 1nhp_A 229 -D---K--NAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDE-YMRTSEPDVFAVGDATLIKYNPADTEVNIALATN 301 (447)
T ss_dssp -S---S--CEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCT-TCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHH
T ss_pred -C---C--CEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECc-cccCCCCCEEEeeeEEEeeccCCCCceechhHHH
Confidence 1 3 4699999999999999998776336677889999999 7889999999999999632 357899
Q ss_pred HHhhHHHHHHHHHH
Q 016820 353 AAGTGCMAALEAEH 366 (382)
Q Consensus 353 a~~~g~~aa~~i~~ 366 (382)
|..||+.+|.+|..
T Consensus 302 A~~qg~~aa~~i~g 315 (447)
T 1nhp_A 302 ARKQGRFAVKNLEE 315 (447)
T ss_dssp HHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHhhcC
Confidence 99999999999863
No 71
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.7e-34 Score=274.92 Aligned_cols=283 Identities=23% Similarity=0.286 Sum_probs=206.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcc---------------cC-----CCCC--
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVE---------------NF-----PGFP-- 114 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~---------------~~-----~~~~-- 114 (382)
.++||+|||||++|+++|..|++.|++|+|||+ ...||+|....+.. .+ .+++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-----~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~ 78 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-----QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA 78 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-----SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-----CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC
Confidence 458999999999999999999999999999994 35777654221100 00 1111
Q ss_pred -CCCChHHHHHH-----------HHHHHHHcCcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCC-CCC
Q 016820 115 -QGILGGDLMDR-----------CRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQ-FPG 181 (382)
Q Consensus 115 -~~~~~~~~~~~-----------~~~~~~~~gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~-~~g 181 (382)
......++..+ +...+++.+++++.+++..++ .+. +..++.++.||+||+|||++|+.|+ ++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~--~~~--v~v~~~~~~~d~lviATGs~p~~~~~~~~ 154 (458)
T 1lvl_A 79 SPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLD--GKQ--VEVDGQRIQCEHLLLATGSSSVELPMLPL 154 (458)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEE--TTE--EEETTEEEECSEEEECCCEEECCBTTBCC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEcc--CCE--EEEeeEEEEeCEEEEeCCCCCCCCCCCCc
Confidence 12344444433 335567789999999766654 343 4444577999999999999987765 442
Q ss_pred CccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-----hHHHHHHhccCCCc
Q 016820 182 SDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-----SKIMQNRALTNPKI 256 (382)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~l~~~gv 256 (382)
+. . +......... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||
T Consensus 155 -~~---~-v~~~~~~~~~--~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv 227 (458)
T 1lvl_A 155 -GG---P-VISSTEALAP--KALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGI 227 (458)
T ss_dssp -BT---T-EECHHHHTCC--SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTC
T ss_pred -cC---c-EecHHHHhhh--hccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCC
Confidence 21 1 1111111112 23478999999999999999999999999999999887632 11222456777899
Q ss_pred EEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh--c-ccccccCCCceeeCCCCCcCCC
Q 016820 257 DVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV--D-GQLDLHSDGYIITKPGTTHTSV 333 (382)
Q Consensus 257 ~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~--~-~~~~~~~~g~i~vd~~~~~t~~ 333 (382)
+++.++++.+++. ++ +.+.. .+++..++++|.+++++|.+|+..++ + .++.++++ ++.||+ .++|+.
T Consensus 228 ~i~~~~~v~~i~~-~~------v~v~~-~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~-~~~t~~ 297 (458)
T 1lvl_A 228 ALHLGHSVEGYEN-GC------LLAND-GKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDE-RCQTSM 297 (458)
T ss_dssp EEETTCEEEEEET-TE------EEEEC-SSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCT-TCBCSS
T ss_pred EEEECCEEEEEEe-CC------EEEEE-CCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECC-CCcCCC
Confidence 9999999999987 32 44442 12333579999999999999998863 3 46777777 999998 688999
Q ss_pred CceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 334 PGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 334 ~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
|+|||+|||+.. ++.+..|..||+.+|.+|..
T Consensus 298 ~~Iya~GD~~~~-~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 298 HNVWAIGDVAGE-PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp TTEEECGGGGCS-SCCHHHHHHHHHHHHHHHTT
T ss_pred CCEEEeeccCCC-cccHHHHHHHHHHHHHHhcC
Confidence 999999999974 57889999999999999973
No 72
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=7.7e-34 Score=282.40 Aligned_cols=298 Identities=18% Similarity=0.187 Sum_probs=209.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEeccc----CCCCCCCcceecCCCcc------------------cCC-CC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWM----ANDIAPGGQLTTTSDVE------------------NFP-GF 113 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~----~~~~~~gg~~~~~~~~~------------------~~~-~~ 113 (382)
..+||+|||||+||+++|..|+++|++|+|||+.. ...+..||.+......+ .+. .+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~ 185 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSL 185 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccc
Confidence 46899999999999999999999999999999521 11224677643222110 000 01
Q ss_pred C---CCCChHHHHHHHHHH-----------HHHcCcEEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcC
Q 016820 114 P---QGILGGDLMDRCRNQ-----------SLRFGTQIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 114 ~---~~~~~~~~~~~~~~~-----------~~~~gi~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~ 176 (382)
+ ......++.++++.. +.+.+++++.+.+..++. ..+.+.+++ .++.||+||+|||++|+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~--~~v~v~~~~g~~~~~~~d~lviAtGs~p~~ 263 (598)
T 2x8g_A 186 DRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISP--HEVQITDKNQKVSTITGNKIILATGERPKY 263 (598)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET--TEEEEECTTCCEEEEEEEEEEECCCEEECC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCC--CEEEEEeCCCCeEEEEeCEEEEeCCCCCCC
Confidence 1 134455665554433 345689998887777763 344554433 358999999999999999
Q ss_pred CCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc----hHHHHHHhcc
Q 016820 177 LQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA----SKIMQNRALT 252 (382)
Q Consensus 177 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~----~~~~~~~~l~ 252 (382)
|++||.+.+.. ........ ...+++++|||+|.+|+|+|..|.+.|.+||++++...++. ......+.++
T Consensus 264 p~i~G~~~~~~----~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~~~~~l~ 337 (598)
T 2x8g_A 264 PEIPGAVEYGI----TSDDLFSL--PYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYME 337 (598)
T ss_dssp CSSTTHHHHCE----EHHHHTTC--SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCcccceE----cHHHHhhC--ccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcCcCCHHHHHHHHHHHH
Confidence 99999754211 11111111 23468999999999999999999999999999998732221 1222245677
Q ss_pred CCCcEEEcCceeEEEEec-----CC---ceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc---ccccccCCCc
Q 016820 253 NPKIDVIWNSVVLEAYGE-----GD---KKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD---GQLDLHSDGY 321 (382)
Q Consensus 253 ~~gv~~~~~~~v~~i~~~-----~~---g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~---~~~~~~~~g~ 321 (382)
+.||+++++..+.++... .+ +. + .+.+.. .+++...+++|.|++++|++|++.++. .++.++++|+
T Consensus 338 ~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~-~-~v~~~~-~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~ 414 (598)
T 2x8g_A 338 NHGVKFAKLCVPDEIKQLKVVDTENNKPGL-L-LVKGHY-TDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGR 414 (598)
T ss_dssp HTTCEEEETEEEEEEEEEECCBTTTTBCCE-E-EEEEEE-TTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSC
T ss_pred hCCCEEEECCeEEEEEeccccccccCCCce-E-EEEEEe-CCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCc
Confidence 789999999988888643 11 21 1 122222 124334566999999999999998642 4677888999
Q ss_pred eeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 322 IITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 322 i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
+.||+ .++|+.|+|||+|||+...+..+..|+.+|+.+|.+|..
T Consensus 415 i~vd~-~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 415 VVCTD-DEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp BCCCT-TSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEeCC-CCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhc
Confidence 99999 688999999999999654467889999999999999874
No 73
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.5e-34 Score=280.02 Aligned_cols=290 Identities=20% Similarity=0.249 Sum_probs=207.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCc-ceecCCCcccCCCCCCCCChHHHHHHHHHHH-HHc
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGG-QLTTTSDVENFPGFPQGILGGDLMDRCRNQS-LRF 133 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 133 (382)
.+||+|||||++|+++|..|++. |.+|+|||+.. ..+. .+..+. ...+. .....++..+..+.+ ++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~----~~~~~~~~~~~---~~~~~--~~~~~~l~~~~~~~~~~~~ 106 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE----IYSYAQCGLPY---VISGA--IASTEKLIARNVKTFRDKY 106 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS----CCSBCGGGHHH---HHTTS--SSCGGGGBSSCHHHHHHTT
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC----CCCCCCCCcch---hhcCC--cCCHHHhhhcCHHHHHhhc
Confidence 36999999999999999999997 89999999532 2211 110000 00000 011223222222333 456
Q ss_pred CcEEEEe-eEEEEEecCCcEEEEE--CCe--EEEcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeeccCCCCCCCC
Q 016820 134 GTQIFTE-TVSKVDFKSRPFKVFT--DSK--SVLADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVCDGAAPIFRD 205 (382)
Q Consensus 134 gi~~~~~-~v~~i~~~~~~~~v~~--~~~--~~~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~ 205 (382)
+++++.+ +|..++.+++.+.+.. ++. ++.||+||+|||++|+.|++||.+. +...................+
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~ 186 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKV 186 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCC
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCC
Confidence 9999886 7999998888888775 244 6999999999999999999998753 111111111111110001157
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc--h---HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEE
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA--S---KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLK 280 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~--~---~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~ 280 (382)
++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. . .....+.+++.||+++.++.+.+++.++. +..+.
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~---v~~v~ 263 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNER---VEAVE 263 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSB---EEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCc---EEEEE
Confidence 9999999999999999999999999999998876532 1 12224567778999999999999987642 22232
Q ss_pred EEeccCCceEEEecCeEEEeeCCCCChhhhc-ccccccCCCceeeCCCCCcCCCCceEEecccCCch---------hhHH
Q 016820 281 VKNLVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKK---------YRQA 350 (382)
Q Consensus 281 ~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~---------~~~~ 350 (382)
+ ++ .++++|.|++|+|++|++.++. .++.++++|++.||+ +++|+.|+|||+|||+... +..+
T Consensus 264 ~-----~~-~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~-~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~ 336 (480)
T 3cgb_A 264 T-----DK-GTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNA-YMQTNVQDVYAAGDCATHYHVIKEIHDHIPIG 336 (480)
T ss_dssp E-----TT-EEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCT-TSBCSSTTEEECGGGBCEEBTTTCSEECCCCH
T ss_pred E-----CC-CEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECC-CccCCCCCEEEeeeEEEecCCCCCcceecchH
Confidence 2 22 4799999999999999988776 467788899999998 7889999999999998532 2468
Q ss_pred HHHHhhHHHHHHHHHH
Q 016820 351 VTAAGTGCMAALEAEH 366 (382)
Q Consensus 351 ~~a~~~g~~aa~~i~~ 366 (382)
..|..||+.+|.+|..
T Consensus 337 ~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 337 TTANKQGRLAGLNMLD 352 (480)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999973
No 74
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=4.1e-35 Score=278.03 Aligned_cols=298 Identities=17% Similarity=0.119 Sum_probs=202.4
Q ss_pred ccEEEECCcHHHHHHHHHHHHcC--CCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAE--LKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
++|||||||+||+++|.+|++++ .+|+|||+.......+....... .....+++...+. .+.+.|++
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~----------g~~~~~~~~~~~~-~~~~~gv~ 71 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIG----------GDRELASLRVGYD-GLRAHGIQ 71 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHH----------TSSCGGGGEECSH-HHHHTTCE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhc----------CCCCHHHHhhCHH-HHHHCCCE
Confidence 68999999999999999999886 68999996321111111110000 0011112211122 23457999
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccccCC-Cccee------eeccCCCCCCCCCcEE
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNR-GISAC------AVCDGAAPIFRDKPLA 209 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~-~~~~~------~~~~~~~~~~~~~~v~ 209 (382)
++.++|+.||++++.+.+. ++.++.||+||+|+|++++.+.+||.++.... ..+.. ...............+
T Consensus 72 ~i~~~v~~id~~~~~v~~~-~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 150 (401)
T 3vrd_B 72 VVHDSALGIDPDKKLVKTA-GGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVV 150 (401)
T ss_dssp EECSCEEEEETTTTEEEET-TSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEE
T ss_pred EEEeEEEEEEccCcEEEec-ccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcE
Confidence 9999999999988755442 55679999999999999999999998763221 11111 1111100011223344
Q ss_pred EEcCCc-----------hHHHHHHHHhhcC--CEEEEEEeCCCCcch----H---HHHHHhccCCCcEEEcCceeEEEEe
Q 016820 210 VIGGGD-----------SAMEEANFLTKYG--SKVYIIHRRDSFRAS----K---IMQNRALTNPKIDVIWNSVVLEAYG 269 (382)
Q Consensus 210 VvG~G~-----------~a~e~a~~l~~~g--~~v~~~~~~~~~~~~----~---~~~~~~l~~~gv~~~~~~~v~~i~~ 269 (382)
|++.+. .+++++.++.+.+ .+|+++++.+.+... . ....+.+++.||+++.+.++..++.
T Consensus 151 v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~ 230 (401)
T 3vrd_B 151 IIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKT 230 (401)
T ss_dssp EEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEE
T ss_pred EEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEe
Confidence 443332 3456666666654 689999988876322 1 1123346778999999999999988
Q ss_pred cCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCC-cCCCCceEEecccCCc--h
Q 016820 270 EGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTT-HTSVPGVFAAGDVQDK--K 346 (382)
Q Consensus 270 ~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~-~t~~~~vya~GD~~~~--~ 346 (382)
+.++ ..+.. ++++++++|.+++++|.+|+..+...++ .+++|||.||++++ .+++|||||+|||+.. .
T Consensus 231 ~~~~-----~~v~~---~~g~~i~~D~vi~~~g~~~~~~~~~~gl-~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~ 301 (401)
T 3vrd_B 231 DTEA-----MTVET---SFGETFKAAVINLIPPQRAGKIAQSASL-TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPM 301 (401)
T ss_dssp ETTT-----TEEEE---TTSCEEECSEEEECCCEEECHHHHHTTC-CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTS
T ss_pred cccc-----eEEEc---CCCcEEEeeEEEEecCcCCchhHhhccc-cccCCCEEECCCcceecCCCCEEEecccccCCCC
Confidence 7764 23333 3346799999999999999855444566 57899999999754 5899999999999853 3
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHHHccCcccc
Q 016820 347 YRQAVTAAGTGCMAALEAEHYLQEIGSQEDK 377 (382)
Q Consensus 347 ~~~~~~a~~~g~~aa~~i~~~l~~~~~~~~~ 377 (382)
+++++.|..||+.+|+||...|.++++.+..
T Consensus 302 pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~~ 332 (401)
T 3vrd_B 302 PKSAYSANSQAKVAAAAVVALLKGEEPGTPS 332 (401)
T ss_dssp CBSHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred CchHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Confidence 7899999999999999999999998765543
No 75
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=3e-35 Score=281.03 Aligned_cols=296 Identities=15% Similarity=0.116 Sum_probs=200.1
Q ss_pred ccEEEECCcHHHHHHHHHHHHcC--CCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAE--LKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
++|||||||+||+++|..|++++ ++|+|||++......++...... .....+++...+++.+++.|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~----------g~~~~~~i~~~~~~~~~~~gv~ 72 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAM----------GWRKFEDISVPLAPLLPKFNIE 72 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHH----------TCSCGGGSEEESTTTGGGGTEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhc----------CCCCHHHhhhcHHHHHHHCCcE
Confidence 57999999999999999999875 88999995311100000000000 0112233333344556678999
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccc--cCCCcceeeeccCC-CCCCCCCcEEEEcC
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAF--WNRGISACAVCDGA-APIFRDKPLAVIGG 213 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~--~~~~~~~~~~~~~~-~~~~~~~~v~VvG~ 213 (382)
++.++|+.||++++.+++. ++.++.||+||+|||+++. +++||.++. ...++.+.....+. ......+.++|+|+
T Consensus 73 ~i~~~v~~Id~~~~~V~~~-~g~~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg 150 (430)
T 3hyw_A 73 FINEKAESIDPDANTVTTQ-SGKKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGA 150 (430)
T ss_dssp EECSCEEEEETTTTEEEET-TCCEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEE
T ss_pred EEEeEEEEEECCCCEEEEC-CCCEEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeC
Confidence 9999999999998865543 4567999999999999865 468886541 11222222111110 00112344566655
Q ss_pred Cc------hHHHHH----HHHhhcC----CEEEEEEeCCCCc--------chHHHHHHhccCCCcEEEcCceeEEEEecC
Q 016820 214 GD------SAMEEA----NFLTKYG----SKVYIIHRRDSFR--------ASKIMQNRALTNPKIDVIWNSVVLEAYGEG 271 (382)
Q Consensus 214 G~------~a~e~a----~~l~~~g----~~v~~~~~~~~~~--------~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~ 271 (382)
+. .+.|++ ..+.+.+ .+|+++...+.+. ......++.+++.||++++++.+++++++.
T Consensus 151 ~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~ 230 (430)
T 3hyw_A 151 IPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDK 230 (430)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSE
T ss_pred CCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeCCc
Confidence 42 233443 3444444 4788888766542 223445677888999999999999997654
Q ss_pred CceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhccc--ccccCCCceeeCCCCCcCCCCceEEecccCCc----
Q 016820 272 DKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVDGQ--LDLHSDGYIITKPGTTHTSVPGVFAAGDVQDK---- 345 (382)
Q Consensus 272 ~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~~--~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~---- 345 (382)
+.+++ .++++.++++|.++|++|.+|+..+...+ +..+.+|++.||+.++.+++|||||+|||+..
T Consensus 231 -------~~~~~-~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~ 302 (430)
T 3hyw_A 231 -------VIYED-LNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIE 302 (430)
T ss_dssp -------EEEEC-TTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSS
T ss_pred -------eEEEe-eCCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcc
Confidence 66665 23556789999999999999986555444 33455678889985455899999999999853
Q ss_pred -------hhhHHHHHHhhHHHHHHHHHHHHHHccCc
Q 016820 346 -------KYRQAVTAAGTGCMAALEAEHYLQEIGSQ 374 (382)
Q Consensus 346 -------~~~~~~~a~~~g~~aa~~i~~~l~~~~~~ 374 (382)
.|++++.|.+||+.+|+||...+.++++.
T Consensus 303 ~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~ 338 (430)
T 3hyw_A 303 KTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp CCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 26789999999999999999999987654
No 76
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=2.2e-33 Score=266.78 Aligned_cols=296 Identities=18% Similarity=0.094 Sum_probs=206.4
Q ss_pred ccEEEECCcHHHHHHHHHHHH---cCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 59 TKVCIIGSGPAAHTAAIYAAR---AELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~---~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
++|+|||||++|+++|..|++ .|++|+|||+.. ..+ ........ ........++...+.+.+++.++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~----~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~gv 71 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR----FSY----FRPALPHV--AIGVRDVDELKVDLSEALPEKGI 71 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS----EEE----ECCSSCCC--CSSCCCCCCEEEEHHHHTGGGTC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC----Cce----eccchhhc--ccCCcCHHHHHHHHHHHHhhCCe
Confidence 589999999999999999999 899999999532 111 11111111 01122334455566777788899
Q ss_pred EEEEeeEEEEEecCCcEEEEECC---eEEEcCEEEEccCCCCcCCCCCCCccc--cCCCcceeeeccCCCCCCCCCcEEE
Q 016820 136 QIFTETVSKVDFKSRPFKVFTDS---KSVLADTVIVATGAVAKKLQFPGSDAF--WNRGISACAVCDGAAPIFRDKPLAV 210 (382)
Q Consensus 136 ~~~~~~v~~i~~~~~~~~v~~~~---~~~~~d~lvlA~G~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~v~V 210 (382)
+++.++|+.++.+++.+.+.... .++.||+||+|+|.+|+.+.+||.+.. ............+.. ....++++|
T Consensus 72 ~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l-~~~~~~~vV 150 (409)
T 3h8l_A 72 QFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKL-ESFQGGNIA 150 (409)
T ss_dssp EEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHH-HHCCSEEEE
T ss_pred EEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHH-HHhcCCeEE
Confidence 99999999999888776665432 238999999999999998889987641 111111111111100 001256779
Q ss_pred EcCCc-------------------------hHHHHH----HHHhhcC----CEEEEEEeCCCCcc----hHHHHHHhccC
Q 016820 211 IGGGD-------------------------SAMEEA----NFLTKYG----SKVYIIHRRDSFRA----SKIMQNRALTN 253 (382)
Q Consensus 211 vG~G~-------------------------~a~e~a----~~l~~~g----~~v~~~~~~~~~~~----~~~~~~~~l~~ 253 (382)
||+|. .++|++ ..+.+.| .+|+++++.+.+.. ......+.+++
T Consensus 151 iG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~ 230 (409)
T 3h8l_A 151 IGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQ 230 (409)
T ss_dssp EEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSSSSTTBCHHHHHHHHHHHHH
T ss_pred EEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCccccccCHHHHHHHHHHHHH
Confidence 99991 356666 4556677 48999998873321 12223466778
Q ss_pred CCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhccccc-ccCCCceeeCCCCCcC-
Q 016820 254 PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVDGQLD-LHSDGYIITKPGTTHT- 331 (382)
Q Consensus 254 ~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~-~~~~g~i~vd~~~~~t- 331 (382)
.||+++++++|++++.+. +.+++ + .++++|.+++++|++|+..+...+.. .+++|++.||+ ++++
T Consensus 231 ~gV~~~~~~~v~~i~~~~-------v~~~~---g--~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~-~~~~~ 297 (409)
T 3h8l_A 231 LGIKLVHNFKIKEIREHE-------IVDEK---G--NTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDL-NMVSI 297 (409)
T ss_dssp HTCEEECSCCEEEECSSE-------EEETT---S--CEEECSEEEEECCEECCHHHHTSCGGGSCTTSCBCBBT-TSBBS
T ss_pred CCCEEEcCCceEEECCCe-------EEECC---C--CEEeeeEEEECCCCCccHHHHhccccCcCCCCCEEeCc-ccccC
Confidence 899999999999997653 65543 3 57999999999999998644444223 46789999999 5666
Q ss_pred CCCceEEecccCCc-hhhHHHHHHhhHHHHHHHHHHHHHHcc-Cccccc
Q 016820 332 SVPGVFAAGDVQDK-KYRQAVTAAGTGCMAALEAEHYLQEIG-SQEDKS 378 (382)
Q Consensus 332 ~~~~vya~GD~~~~-~~~~~~~a~~~g~~aa~~i~~~l~~~~-~~~~~~ 378 (382)
++||||++|||+.. .++.+..|..||+.+|.+|...+.+.. ..++.+
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~~~~~~~~~~~ 346 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGVPTKVDKYYP 346 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTTCCCCCCCCCC
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCccccCC
Confidence 89999999999963 478899999999999999999994333 244444
No 77
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=4.1e-32 Score=260.82 Aligned_cols=281 Identities=17% Similarity=0.156 Sum_probs=204.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC--CeEEEecccCCCCCCCcceecCCCc---------------------------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL--KPILFEGWMANDIAPGGQLTTTSDV--------------------------- 107 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~--~v~lie~~~~~~~~~gg~~~~~~~~--------------------------- 107 (382)
..+||+|||||++|+++|..|++.|. +|+|||+ ...+||.|......
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~----~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~ 80 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFER----RGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVY 80 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECS----SSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEec----CCCCCCeecCCCCCCcccccccccccccccccccccccCCc
Confidence 45899999999999999999999999 9999995 33445554432110
Q ss_pred ----------------ccCCCC------CCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEEC----Ce-
Q 016820 108 ----------------ENFPGF------PQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTD----SK- 159 (382)
Q Consensus 108 ----------------~~~~~~------~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~----~~- 159 (382)
..++.+ +......++.+++++++++++..++.+ +|+.++.+++.|.+.+. +.
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~ 160 (447)
T 2gv8_A 81 PSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSP 160 (447)
T ss_dssp CCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCC
T ss_pred cCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCe
Confidence 001111 122346788999999998888777777 79999988877777653 34
Q ss_pred --EEEcCEEEEccCC--CCcCCCCCCCccc----cCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCE-
Q 016820 160 --SVLADTVIVATGA--VAKKLQFPGSDAF----WNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSK- 230 (382)
Q Consensus 160 --~~~~d~lvlA~G~--~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~- 230 (382)
++.||+||+|+|. .|+.|.+||.+.+ .....+...+.+.. ...+++|+|||+|.+|+|+|..|.+.+.+
T Consensus 161 ~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~--~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~ 238 (447)
T 2gv8_A 161 ISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPE--LFVGESVLVVGGASSANDLVRHLTPVAKHP 238 (447)
T ss_dssp EEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGG--GGTTCCEEEECSSHHHHHHHHHHTTTSCSS
T ss_pred eEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChh--hcCCCEEEEEccCcCHHHHHHHHHHHhCCc
Confidence 6999999999999 7888899997653 22334444444333 44689999999999999999999999999
Q ss_pred EEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhh-
Q 016820 231 VYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKF- 309 (382)
Q Consensus 231 v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~- 309 (382)
|+++.|.+.+ +...||.+ +..|.++..++. .|++.+ + ...+++|.||+|||++|++++
T Consensus 239 V~l~~r~~~~----------l~~~~i~~--~~~v~~~~~~~~-----~v~~~d---G-~~~~~~D~vi~atG~~~~~~~l 297 (447)
T 2gv8_A 239 IYQSLLGGGD----------IQNESLQQ--VPEITKFDPTTR-----EIYLKG---G-KVLSNIDRVIYCTGYLYSVPFP 297 (447)
T ss_dssp EEEECTTCCS----------CBCSSEEE--ECCEEEEETTTT-----EEEETT---T-EEECCCSEEEECCCBCCCCCCH
T ss_pred EEEEeCCCCc----------CCCCCeEE--ecCeEEEecCCC-----EEEECC---C-CEeccCCEEEECCCCCcCCCCC
Confidence 9999998765 55668875 577888875443 266653 4 234799999999999999988
Q ss_pred ----hcc-cccccCCCceeeCC--CCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHH
Q 016820 310 ----VDG-QLDLHSDGYIITKP--GTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 310 ----~~~-~~~~~~~g~i~vd~--~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~ 366 (382)
+.. +..+..++.+.++. +.+.+++|+||++||+... ..+..|..||+.+|.++..
T Consensus 298 ~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~--~~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 298 SLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHV--VPFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp HHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSS--CHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCceecCCCcccccccccccCCCCcEEEEeccccc--cCchHHHHHHHHHHHHHcC
Confidence 652 11222234444443 1223789999999999864 3678899999999988863
No 78
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=4.6e-34 Score=273.07 Aligned_cols=295 Identities=15% Similarity=0.099 Sum_probs=202.2
Q ss_pred cccEEEECCcHHHHHHHHHHHH--cCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 58 KTKVCIIGSGPAAHTAAIYAAR--AELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~--~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
++||+|||||++|+++|..|++ .|++|+|||+. ...+..... ..+. .......++...+.+.+++.|+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~----~~~~~~~~~----~~~~--~g~~~~~~~~~~~~~~~~~~gv 71 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR----PYFGFTPAF----PHLA--MGWRKFEDISVPLAPLLPKFNI 71 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS----SEEECGGGH----HHHH--HTCSCGGGSEEESTTTGGGGTE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC----CCCCcCCCc----chhc--cCccCHHHHHHHHHHHHHhcCC
Confidence 3689999999999999999999 68999999953 111111000 0000 0012223333444555667899
Q ss_pred EEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCcc--ccCCCcceeeeccC-CCCCCCCCcEEEEc
Q 016820 136 QIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDA--FWNRGISACAVCDG-AAPIFRDKPLAVIG 212 (382)
Q Consensus 136 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~--~~~~~~~~~~~~~~-~~~~~~~~~v~VvG 212 (382)
+++.++++.++++++.+.+. ++.++.||+||+|+|++|..|.+.. .. .............. .......++++|||
T Consensus 72 ~~~~~~v~~id~~~~~v~~~-~g~~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVG 149 (430)
T 3h28_A 72 EFINEKAESIDPDANTVTTQ-SGKKIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQELYANPGPVVIG 149 (430)
T ss_dssp EEECSCEEEEETTTTEEEET-TCCEEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred EEEEEEEEEEECCCCEEEEC-CCcEEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 99988999999887644332 4456999999999999987663321 11 11111111111000 00011134568889
Q ss_pred CCchH------HHHHH----HHhhcC----CEEEEEEeCCCCc--------chHHHHHHhccCCCcEEEcCceeEEEEec
Q 016820 213 GGDSA------MEEAN----FLTKYG----SKVYIIHRRDSFR--------ASKIMQNRALTNPKIDVIWNSVVLEAYGE 270 (382)
Q Consensus 213 ~G~~a------~e~a~----~l~~~g----~~v~~~~~~~~~~--------~~~~~~~~~l~~~gv~~~~~~~v~~i~~~ 270 (382)
+|+.+ +|+|. .+.+.| .+|+++++.+.+. .......+.+++.||++++++.+++++.+
T Consensus 150 gG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~ 229 (430)
T 3h28_A 150 AIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPD 229 (430)
T ss_dssp ECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSS
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeCC
Confidence 87653 77774 445556 4799999887551 12344457788899999999999999765
Q ss_pred CCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc--ccccccCCC-ceeeCCCCCcC-CCCceEEecccCCc-
Q 016820 271 GDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD--GQLDLHSDG-YIITKPGTTHT-SVPGVFAAGDVQDK- 345 (382)
Q Consensus 271 ~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~--~~~~~~~~g-~i~vd~~~~~t-~~~~vya~GD~~~~- 345 (382)
+ +++++.. +++.++++|.+++++|++|+..+.. .++ .+++| ++.||+ ++++ ++|||||+|||+..
T Consensus 230 ~-------v~~~~~~-~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl-~~~~G~~i~Vd~-~l~t~~~~~Ifa~GD~~~~~ 299 (430)
T 3h28_A 230 K-------VIYEDLN-GNTHEVPAKFTMFMPSFQGPEVVASAGDKV-ANPANKMVIVNR-CFQNPTYKNIFGVGVVTAIP 299 (430)
T ss_dssp E-------EEEECTT-SCEEEEECSEEEEECEEECCHHHHTTCTTT-BCTTTCCBCCCT-TSBCSSSTTEEECSTTBCCC
T ss_pred e-------EEEEecC-CCceEEeeeEEEECCCCccchhHhhccccC-cCCCCCEEecCc-cccCCCCCCEEEEEeeeccC
Confidence 4 6665432 3467899999999999999865544 255 67889 999999 5666 99999999999864
Q ss_pred ----------hhhHHHHHHhhHHHHHHHHHHHHHHccCc
Q 016820 346 ----------KYRQAVTAAGTGCMAALEAEHYLQEIGSQ 374 (382)
Q Consensus 346 ----------~~~~~~~a~~~g~~aa~~i~~~l~~~~~~ 374 (382)
.++++..|+.||+.+|.||..+|.++++.
T Consensus 300 ~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~ 338 (430)
T 3h28_A 300 PIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp CSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 26789999999999999999999987654
No 79
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=100.00 E-value=7.7e-33 Score=265.39 Aligned_cols=286 Identities=19% Similarity=0.197 Sum_probs=208.3
Q ss_pred cccEEEECCcHHHHHHHHHHHH-c------CCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHH
Q 016820 58 KTKVCIIGSGPAAHTAAIYAAR-A------ELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQS 130 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~-~------g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (382)
++||+|||||++|+++|..|++ . |++|+|||+ ...++|.+... ..|......++..++.+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~----~~~~gg~~~~g-------v~p~~~~~~~~~~~~~~~~ 71 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEM----LPTPWGLVRSG-------VAPDHPKIKSISKQFEKTA 71 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEES----SSSCSTHHHHT-------SCTTCTGGGGGHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEec----CCCCCCccccc-------cCCCCCCHHHHHHHHHHHH
Confidence 5799999999999999999999 7 999999994 34466666421 1233445667888888888
Q ss_pred HHcCcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCC-CcCCCCCCCccccCCCcceeee----------c-cC
Q 016820 131 LRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAV-AKKLQFPGSDAFWNRGISACAV----------C-DG 198 (382)
Q Consensus 131 ~~~gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~-~~~~~~~g~~~~~~~~~~~~~~----------~-~~ 198 (382)
++.+++++.+. .+ ++.+.+ ++..+.||+||+|||+. |+.+++||.+. ..++.+.. + ..
T Consensus 72 ~~~~v~~~~~v--~v---~~~v~~--~~~~~~~d~lViAtG~~~~~~~~ipG~~~---~gv~~~~~~~~~~~~~~d~~~~ 141 (456)
T 1lqt_A 72 EDPRFRFFGNV--VV---GEHVQP--GELSERYDAVIYAVGAQSDRMLNIPGEDL---PGSIAAVDFVGWYNAHPHFEQV 141 (456)
T ss_dssp TSTTEEEEESC--CB---TTTBCH--HHHHHHSSEEEECCCCCEECCCCCTTTTS---TTEEEHHHHHHHHTTCGGGTTC
T ss_pred hcCCCEEEeeE--EE---CCEEEE--CCCeEeCCEEEEeeCCCCCCCCCCCCCCC---CCcEEHHHHHhhhhcCcccccc
Confidence 88999998772 12 223332 23357899999999997 78888998762 11111110 0 11
Q ss_pred CCCCCCCCcEEEEcCCchHHHHHHHHhhc--------------------C-CEEEEEEeCCCCcch--------------
Q 016820 199 AAPIFRDKPLAVIGGGDSAMEEANFLTKY--------------------G-SKVYIIHRRDSFRAS-------------- 243 (382)
Q Consensus 199 ~~~~~~~~~v~VvG~G~~a~e~a~~l~~~--------------------g-~~v~~~~~~~~~~~~-------------- 243 (382)
. ....+++++|||+|++|+|+|..|.+. + .+|+++.|++.+...
T Consensus 142 ~-~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~ 220 (456)
T 1lqt_A 142 S-PDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDG 220 (456)
T ss_dssp C-CCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTT
T ss_pred h-hhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCC
Confidence 1 123579999999999999999999874 4 599999998754210
Q ss_pred ----------------------------HHHHHHhccC------CCcEEEcCceeEEEEecCCceeeeeEEEEec-----
Q 016820 244 ----------------------------KIMQNRALTN------PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNL----- 284 (382)
Q Consensus 244 ----------------------------~~~~~~~l~~------~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~----- 284 (382)
..++.+.+.+ .||+++++..+.++..++. +.++++...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~---v~~v~~~~~~~~~~ 297 (456)
T 1lqt_A 221 VDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRK---VERIVLGRNELVSD 297 (456)
T ss_dssp EEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSS---CCEEEEEEEEEEEC
T ss_pred ceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCc---EeEEEEEEEEecCC
Confidence 0112233444 7899999999999987632 444665421
Q ss_pred --------cCCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhh
Q 016820 285 --------VTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGT 356 (382)
Q Consensus 285 --------~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~ 356 (382)
.+++..+++||.|++++|++|++ + . ++.++++|++.+|+..+.++.|+|||+|||...+...+..|+.+
T Consensus 298 ~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l-~-gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~ 374 (456)
T 1lqt_A 298 GSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T-P-GLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKD 374 (456)
T ss_dssp SSSSEEEEEEEEEEEEECSEEEECSCEECCC-C-T-TSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSCTTHHHHH
T ss_pred CcccccccCCCceEEEEcCEEEEccccccCC-C-C-CCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchhHHHHHHH
Confidence 12333579999999999999988 2 3 77888899999998544489999999999985443456689999
Q ss_pred HHHHHHHHHHHHHHc
Q 016820 357 GCMAALEAEHYLQEI 371 (382)
Q Consensus 357 g~~aa~~i~~~l~~~ 371 (382)
|..+|.+|..++.+.
T Consensus 375 g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 375 AQDTVDTLIKNLGNA 389 (456)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999999864
No 80
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=7.4e-33 Score=265.79 Aligned_cols=291 Identities=17% Similarity=0.234 Sum_probs=208.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcC--CCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAE--LKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFG 134 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 134 (382)
.+++|+|||||++|+++|..|++.| ++|+|||+ ...++|.+... ..|......++..++.+.+++.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~----~~~~gg~~~~g-------~~p~~~~~~~~~~~~~~~~~~~g 73 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEK----QLVPFGLVRFG-------VAPDHPEVKNVINTFTQTARSDR 73 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECS----SSSSCTHHHHT-------SCTTCGGGGGHHHHHHHHHTSTT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeC----CCcCCceeecc-------cCCCCccHHHHHHHHHHHHHhCC
Confidence 3579999999999999999999998 99999994 44456655321 11222344677888888888899
Q ss_pred cEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCC-cCCCCCCCccccCCCcceeee----------ccCCCCCC
Q 016820 135 TQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVA-KKLQFPGSDAFWNRGISACAV----------CDGAAPIF 203 (382)
Q Consensus 135 i~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~-~~~~~~g~~~~~~~~~~~~~~----------~~~~~~~~ 203 (382)
++++.+... .+.+.+ ++..+.||+||+|||+.| +.|++||.+. ..++.+.. ........
T Consensus 74 v~~~~~~~v-----~~~V~~--~~~~~~~d~lVlAtGs~~~~~~~ipG~~~---~gv~~~~~~~~~~~~~~d~~~~~~~~ 143 (460)
T 1cjc_A 74 CAFYGNVEV-----GRDVTV--QELQDAYHAVVLSYGAEDHQALDIPGEEL---PGVFSARAFVGWYNGLPENRELAPDL 143 (460)
T ss_dssp EEEEBSCCB-----TTTBCH--HHHHHHSSEEEECCCCCEECCCCCTTTTS---TTEEEHHHHHHHHTTCGGGTTCCCCT
T ss_pred cEEEeeeEE-----eeEEEe--ccceEEcCEEEEecCcCCCCCCCCCCCCC---CcEEEHHHHHHHhhcCccccccccCC
Confidence 999887421 122222 223478999999999995 7788999753 12222211 11111022
Q ss_pred CCCcEEEEcCCchHHHHHHHHh--------------------hcCC-EEEEEEeCCCCcc--------------------
Q 016820 204 RDKPLAVIGGGDSAMEEANFLT--------------------KYGS-KVYIIHRRDSFRA-------------------- 242 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~--------------------~~g~-~v~~~~~~~~~~~-------------------- 242 (382)
.+++++|||+|++|+|+|..|. +.+. +|+++.|++.+..
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~ 223 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPML 223 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEe
Confidence 5799999999999999999998 5565 7999998875410
Q ss_pred ---------------------hHHHHHHhccC--------------CCcEEEcCceeEEEEecCCceeeeeEEEEecc--
Q 016820 243 ---------------------SKIMQNRALTN--------------PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLV-- 285 (382)
Q Consensus 243 ---------------------~~~~~~~~l~~--------------~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~-- 285 (382)
...++.+.+.+ .||+++++..+.+|..++++..+.++++....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~ 303 (460)
T 1cjc_A 224 DPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLE 303 (460)
T ss_dssp CGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEE
T ss_pred chhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEc
Confidence 00111122333 78999999999999876422014456654211
Q ss_pred ----------CCceEEEecCeEEEeeCCCCChhhhcccc-cccCCCceeeCCCCCcCC-CCceEEecccCCchhhHHHHH
Q 016820 286 ----------TGQVSDLKVSGLFFAIGHEPATKFVDGQL-DLHSDGYIITKPGTTHTS-VPGVFAAGDVQDKKYRQAVTA 353 (382)
Q Consensus 286 ----------~~~~~~~~~D~vi~~~G~~p~~~~~~~~~-~~~~~g~i~vd~~~~~t~-~~~vya~GD~~~~~~~~~~~a 353 (382)
+++...+++|.|++++|++|++ + .++ .++++|++.+|+ .++|+ .|+|||+|||+..+...+..|
T Consensus 304 ~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l--~gl~~~d~~g~i~vn~-~~rt~~~p~vya~Gd~~~g~~~~i~~a 379 (460)
T 1cjc_A 304 GIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I--DPSVPFDPKLGVVPNM-EGRVVDVPGLYCSGWVKRGPTGVITTT 379 (460)
T ss_dssp SSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C--CTTSCCBTTTTBCCEE-TTEETTCTTEEECTHHHHCTTCCHHHH
T ss_pred cccCCCcccCCCceEEEEcCEEEECCCCCCCC-C--CCCcccccCCCeeECC-CCcCcCCCCEEEEEeCCcCCCccHHHH
Confidence 2344689999999999999998 3 477 888889999998 67787 799999999985444457799
Q ss_pred HhhHHHHHHHHHHHHHHcc
Q 016820 354 AGTGCMAALEAEHYLQEIG 372 (382)
Q Consensus 354 ~~~g~~aa~~i~~~l~~~~ 372 (382)
+.+|+.+|.+|..++.+..
T Consensus 380 ~~~g~~aa~~i~~~l~~~~ 398 (460)
T 1cjc_A 380 MTDSFLTGQILLQDLKAGH 398 (460)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhCc
Confidence 9999999999999998754
No 81
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.98 E-value=5e-32 Score=282.92 Aligned_cols=290 Identities=20% Similarity=0.258 Sum_probs=209.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC-CeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL-KPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
..+||+|||||+||+++|..|+++|+ +|+||| +....||.+.. ..|.+ ....++.++..+.+++.|+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E----~~~~~GG~~~~-----~ip~~---~~~~~~~~~~~~~~~~~gv 253 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFE----KQEYVGGLSTS-----EIPQF---RLPYDVVNFEIELMKDLGV 253 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEE----SSSSCSTHHHH-----TSCTT---TSCHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEe----CCCCCCccccc-----cCCcc---cCCHHHHHHHHHHHHHCCc
Confidence 46899999999999999999999999 799999 44567777543 12222 2235667777788888999
Q ss_pred EEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCC-CCcCCCC-CCCccccCCCccee-e--------------eccC
Q 016820 136 QIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGA-VAKKLQF-PGSDAFWNRGISAC-A--------------VCDG 198 (382)
Q Consensus 136 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~-~~~~~~~-~g~~~~~~~~~~~~-~--------------~~~~ 198 (382)
+++.++.... +.+++. +...+.||+||+|||+ .|+.+++ +|.+.. ..++.. . ..+.
T Consensus 254 ~~~~~~~v~~----~~v~~~-~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~--~gv~~a~~~L~~~~~~~~~~~~~~~~ 326 (1025)
T 1gte_A 254 KIICGKSLSE----NEITLN-TLKEEGYKAAFIGIGLPEPKTDDIFQGLTQD--QGFYTSKDFLPLVAKSSKAGMCACHS 326 (1025)
T ss_dssp EEEESCCBST----TSBCHH-HHHHTTCCEEEECCCCCEECCCGGGTTCCTT--TTEEEHHHHHHHHHHHHCBTTBSCCC
T ss_pred EEEcccEecc----ceEEhh-hcCccCCCEEEEecCCCCCCCCCCCCCCCCC--CCEEEhHHHHHHHHhhcccccccccc
Confidence 9998854321 222221 1234789999999999 5876654 354311 111110 0 0111
Q ss_pred CCCCCCCCcEEEEcCCchHHHHHHHHhhcCC-EEEEEEeCCC-C-cchHHHHHHhccCCCcEEEcCceeEEEEecCCcee
Q 016820 199 AAPIFRDKPLAVIGGGDSAMEEANFLTKYGS-KVYIIHRRDS-F-RASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKV 275 (382)
Q Consensus 199 ~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~-~v~~~~~~~~-~-~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~ 275 (382)
.. ...+++|+|||+|.+|+|+|..+.++|. +||++++.+. . +...... +.++++||+++.+..+.++..+++ .
T Consensus 327 ~~-~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~-~~~~~~Gv~~~~~~~~~~i~~~~g--~ 402 (1025)
T 1gte_A 327 PL-PSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV-ELAKEEKCEFLPFLSPRKVIVKGG--R 402 (1025)
T ss_dssp CC-CCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH-HHHHHTTCEEECSEEEEEEEEETT--E
T ss_pred cc-cccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH-HHHHHcCCEEEeCCCceEEEccCC--e
Confidence 11 2236799999999999999999999996 8999999873 2 2223332 346678999999999999987533 2
Q ss_pred eeeEEEEecc----------CCceEEEecCeEEEeeCCCCC-hhhhc--ccccccCCCceeeCCCCCcCCCCceEEeccc
Q 016820 276 LGGLKVKNLV----------TGQVSDLKVSGLFFAIGHEPA-TKFVD--GQLDLHSDGYIITKPGTTHTSVPGVFAAGDV 342 (382)
Q Consensus 276 ~~~v~~~~~~----------~~~~~~~~~D~vi~~~G~~p~-~~~~~--~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~ 342 (382)
+.++++.... ++++.++++|.|++++|++|+ ..++. .++.++++|++.||+.+++|+.|+|||+|||
T Consensus 403 v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~ 482 (1025)
T 1gte_A 403 IVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDI 482 (1025)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGG
T ss_pred EEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCC
Confidence 5555554210 123357999999999999864 55554 3688888999999986789999999999999
Q ss_pred CCchhhHHHHHHhhHHHHHHHHHHHHHH
Q 016820 343 QDKKYRQAVTAAGTGCMAALEAEHYLQE 370 (382)
Q Consensus 343 ~~~~~~~~~~a~~~g~~aa~~i~~~l~~ 370 (382)
+.. +.++..|+.+|+.||.+|..+|..
T Consensus 483 ~~~-~~~~~~A~~~G~~aA~~i~~~L~~ 509 (1025)
T 1gte_A 483 VGM-ANTTVESVNDGKQASWYIHKYIQA 509 (1025)
T ss_dssp GCS-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-chHHHHHHHHHHHHHHHHHHHHHh
Confidence 974 578899999999999999999984
No 82
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.98 E-value=9.5e-33 Score=267.89 Aligned_cols=297 Identities=18% Similarity=0.177 Sum_probs=196.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCC---CCCcceecCCCc-----ccCCCCCCC-----CChHH
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDI---APGGQLTTTSDV-----ENFPGFPQG-----ILGGD 121 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~---~~gg~~~~~~~~-----~~~~~~~~~-----~~~~~ 121 (382)
..+||||||||+||+++|..|++. |.+|+|||+...... .++..+...... ..++.++.. ....+
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 458999999999999999999888 899999996421110 001111000000 000000000 00000
Q ss_pred HHHHHHH--HHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCcc-------ccCCCcc
Q 016820 122 LMDRCRN--QSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDA-------FWNRGIS 191 (382)
Q Consensus 122 ~~~~~~~--~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~-------~~~~~~~ 191 (382)
+...... ...+.+++++.+ +|..|+.+++.+.+. ++.++.||+||+|||++|+.+++++... +..+...
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~-~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~ 168 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLN-DGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIG 168 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEET-TSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHH
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEEC-CCCEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHH
Confidence 0000000 013568999998 799999877655442 4567999999999999998776654211 1111111
Q ss_pred eeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhh----cCCEEEEEEeCCCCc----c--hHHHHHHhccCCCcEEEcC
Q 016820 192 ACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTK----YGSKVYIIHRRDSFR----A--SKIMQNRALTNPKIDVIWN 261 (382)
Q Consensus 192 ~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~----~g~~v~~~~~~~~~~----~--~~~~~~~~l~~~gv~~~~~ 261 (382)
++..+... ...+++++|||+|.+|+|+|..|.+ .|.+|+++.+.+.+. . ......+.+++.||+++++
T Consensus 169 d~~~l~~~--~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~ 246 (493)
T 1m6i_A 169 DFRSLEKI--SREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPN 246 (493)
T ss_dssp HHHHHHHH--HHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECS
T ss_pred HHHHHHHH--hhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeC
Confidence 11111111 2247899999999999999999876 478999998875431 1 1222346678899999999
Q ss_pred ceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc-ccccccC-CCceeeCCCCCcCCCCceEEe
Q 016820 262 SVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD-GQLDLHS-DGYIITKPGTTHTSVPGVFAA 339 (382)
Q Consensus 262 ~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~-~~~~~~~-~g~i~vd~~~~~t~~~~vya~ 339 (382)
+.+.+++.+++. ..+++. ++.++++|.|++++|.+|++.++. .++.+++ +|++.||+ +++| .|+|||+
T Consensus 247 ~~V~~i~~~~~~---~~v~l~-----dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~-~l~t-~~~IyA~ 316 (493)
T 1m6i_A 247 AIVQSVGVSSGK---LLIKLK-----DGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNA-ELQA-RSNIWVA 316 (493)
T ss_dssp CCEEEEEEETTE---EEEEET-----TSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCT-TCEE-ETTEEEC
T ss_pred CEEEEEEecCCe---EEEEEC-----CCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECC-Cccc-CCCeeEe
Confidence 999999876542 123332 235799999999999999998775 4677775 68999998 5677 6999999
Q ss_pred cccCCch--------hhHHHHHHhhHHHHHHHHHH
Q 016820 340 GDVQDKK--------YRQAVTAAGTGCMAALEAEH 366 (382)
Q Consensus 340 GD~~~~~--------~~~~~~a~~~g~~aa~~i~~ 366 (382)
|||+..+ ...+..|+.||+.+|.||..
T Consensus 317 GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g 351 (493)
T 1m6i_A 317 GDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTG 351 (493)
T ss_dssp GGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTS
T ss_pred eeeEeccCcccCccccchHHHHHHHHHHHHHHhcC
Confidence 9998632 12466899999999999973
No 83
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=4.4e-31 Score=274.05 Aligned_cols=287 Identities=22% Similarity=0.261 Sum_probs=210.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHc-Cc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRF-GT 135 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gi 135 (382)
..+||+|||||+||+++|..|++.|++|+||| ....+||++.. .....++ .....++...+.+.+.++ ++
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie----~~~~~GG~~~~-~~k~~i~----~~~~~~~~~~~~~~l~~~~~v 197 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLD----ERAEAGGTLLD-TAGEQID----GMDSSAWIEQVTSELAEAEET 197 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSSGGGGG-SSCCEET----TEEHHHHHHHHHHHHHHSTTE
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEe----CCCCCCceecc-CCccccC----CCCHHHHHHHHHHHHhhcCCc
Confidence 46899999999999999999999999999999 55567777763 1101111 223456666666666665 89
Q ss_pred EEEEe-eEEEEEecCCc---------EEEEE-------CCeEEEcCEEEEccCCCCcCCCCCCCccccCCCccee----e
Q 016820 136 QIFTE-TVSKVDFKSRP---------FKVFT-------DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISAC----A 194 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~---------~~v~~-------~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~----~ 194 (382)
+++.+ +|..++.++.. +.+.+ +..++.||+||+|||+.|+.+++||.+. ..+..+ .
T Consensus 198 ~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~---~gv~~~~~~~~ 274 (965)
T 2gag_A 198 THLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDR---PGIMLAGAVRS 274 (965)
T ss_dssp EEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCS---TTEEEHHHHHH
T ss_pred EEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCC---CCEEEhHHHHH
Confidence 99887 68887754321 11111 1125899999999999999999998764 122211 1
Q ss_pred eccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEec-CCc
Q 016820 195 VCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGE-GDK 273 (382)
Q Consensus 195 ~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~-~~g 273 (382)
+.... ....+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+... .+.+++.||+++.+..+.++..+ +++
T Consensus 275 ~l~~~-~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~----~~~l~~~GV~v~~~~~v~~i~~~~~~~ 349 (965)
T 2gag_A 275 YLNRY-GVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAA----AAQAVADGVQVISGSVVVDTEADENGE 349 (965)
T ss_dssp HHHTT-CEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCHH----HHHHHHTTCCEEETEEEEEEEECTTSC
T ss_pred HHHhc-CCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccchh----HHHHHhCCeEEEeCCEeEEEeccCCCC
Confidence 12211 1234689999999999999999999999999999999877543 34577889999999999999984 221
Q ss_pred eeeeeEEEEecc----CCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCC----cCCCCceEEecccCCc
Q 016820 274 KVLGGLKVKNLV----TGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTT----HTSVPGVFAAGDVQDK 345 (382)
Q Consensus 274 ~~~~~v~~~~~~----~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~----~t~~~~vya~GD~~~~ 345 (382)
+..|++.+.. .++..++++|.|++++|++|++.++. ...+++.+|+... .|+.|+|||+|||++.
T Consensus 350 --v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~-----~~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~ 422 (965)
T 2gag_A 350 --LSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHS-----QRQGKLDWDTTIHAFVPADAVANQHLAGAMTGR 422 (965)
T ss_dssp --EEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHH-----HTTCCEEEETTTTEEEECSCCTTEEECGGGGTC
T ss_pred --EEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHH-----hCCCcEEEcCcccccccCCCCCCEEEEEecCCc
Confidence 5557776410 13336899999999999999998765 1257888888433 2899999999999975
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHHH
Q 016820 346 KYRQAVTAAGTGCMAALEAEHYLQ 369 (382)
Q Consensus 346 ~~~~~~~a~~~g~~aa~~i~~~l~ 369 (382)
. ....|+.||+.+|.+|...+.
T Consensus 423 ~--~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 423 L--DTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp C--SHHHHHHHHHHHHHHHHHHTT
T ss_pred h--hHHHHHHHHHHHHHHHHHHcC
Confidence 3 345899999999999999875
No 84
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=1.4e-30 Score=251.42 Aligned_cols=304 Identities=15% Similarity=0.133 Sum_probs=198.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcC-----CCeEEEecccCCCCCCCcceecCCCcc----------cCCCC--------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAE-----LKPILFEGWMANDIAPGGQLTTTSDVE----------NFPGF-------- 113 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g-----~~v~lie~~~~~~~~~gg~~~~~~~~~----------~~~~~-------- 113 (382)
..+||+|||||++|+++|..|++.| .+|+|||+....++..+..+. ..... ..|..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVS-QSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCS-SCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCC-CCcCCcchhhccccccCCCCCCChhHhh
Confidence 3579999999999999999999999 999999964322222111100 00000 00000
Q ss_pred -------------CCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEec---CCc--EEEEEC-Ce----EEEcCEEEEc
Q 016820 114 -------------PQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFK---SRP--FKVFTD-SK----SVLADTVIVA 169 (382)
Q Consensus 114 -------------~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~---~~~--~~v~~~-~~----~~~~d~lvlA 169 (382)
.......++.+++++.+++++++++.+ +|+.|+.+ ++. +.+.+. +. ++.||+||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 012346788899999999999999888 69999876 443 245442 22 7999999999
Q ss_pred cCCCCcCCCCCCCccccC--CCcceeeeccCCCCC----CCCCcEEEEcCCchHHHHHHHHhhc--CCEEEEEEeCCCCc
Q 016820 170 TGAVAKKLQFPGSDAFWN--RGISACAVCDGAAPI----FRDKPLAVIGGGDSAMEEANFLTKY--GSKVYIIHRRDSFR 241 (382)
Q Consensus 170 ~G~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~----~~~~~v~VvG~G~~a~e~a~~l~~~--g~~v~~~~~~~~~~ 241 (382)
||..|..|+. .+.+.. ..++...+....... ..+++|+|||+|.+|+|+|..|.+. +.+|+++.|.+.+.
T Consensus 188 tG~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~ 265 (463)
T 3s5w_A 188 PGGTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALK 265 (463)
T ss_dssp CCCEECCCGG--GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCC
T ss_pred CCCCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCc
Confidence 9998877652 112222 223333333321111 1578999999999999999999998 89999999998652
Q ss_pred ch--------------------------HHHHH-------------------------HhccCCCcEEEcCceeEEEEec
Q 016820 242 AS--------------------------KIMQN-------------------------RALTNPKIDVIWNSVVLEAYGE 270 (382)
Q Consensus 242 ~~--------------------------~~~~~-------------------------~~l~~~gv~~~~~~~v~~i~~~ 270 (382)
.. ..+.+ +.....||+++.++.++++..+
T Consensus 266 p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~ 345 (463)
T 3s5w_A 266 PADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATAT 345 (463)
T ss_dssp BCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEE
T ss_pred CccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEec
Confidence 10 01111 1112269999999999999987
Q ss_pred CCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCC--hhhhcccccccCCCceeeCCCCCcCC----CCceEEecccCC
Q 016820 271 GDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPA--TKFVDGQLDLHSDGYIITKPGTTHTS----VPGVFAAGDVQD 344 (382)
Q Consensus 271 ~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~--~~~~~~~~~~~~~g~i~vd~~~~~t~----~~~vya~GD~~~ 344 (382)
+++ ..+.+.+..+++..++++|.||+|||++|+ .+++. ++.... |++.||++++... .|+||++|||..
T Consensus 346 ~~~---~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~-~l~~~~-g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~ 420 (463)
T 3s5w_A 346 AQG---IELALRDAGSGELSVETYDAVILATGYERQLHRQLLE-PLAEYL-GDHEIGRDYRLQTDERCKVAIYAQGFSQA 420 (463)
T ss_dssp TTE---EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTG-GGGGGB-C--CCCTTSBCCBCTTBCSEEEESSCCHH
T ss_pred CCE---EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhH-HHHHHh-CCcccCcccccccCCCCCCeEEEcCCCcc
Confidence 753 335666443465667999999999999999 55655 332222 8899998544332 467999999974
Q ss_pred c----hhhHHHHHHhhHHHHHHHHHHHH
Q 016820 345 K----KYRQAVTAAGTGCMAALEAEHYL 368 (382)
Q Consensus 345 ~----~~~~~~~a~~~g~~aa~~i~~~l 368 (382)
. .+.....|.+++..++....+..
T Consensus 421 ~~g~~~~~l~~~a~r~~~i~~~~~~~~~ 448 (463)
T 3s5w_A 421 SHGLSDTLLSVLPVRAEEISGSLYQHLK 448 (463)
T ss_dssp HHCTTTTSSTTHHHHHHHHHHHHHHHHC
T ss_pred cCCcCccchhHHHHHHHHHHHHHHhhcC
Confidence 2 13345566666665554444443
No 85
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.97 E-value=6.2e-30 Score=249.91 Aligned_cols=294 Identities=16% Similarity=0.204 Sum_probs=212.8
Q ss_pred ccccEEEECCcHHHHHHHHHHH-HcCCCeEEEecccCCCCCCCcceecCC----------CcccCC---------CCC-C
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAA-RAELKPILFEGWMANDIAPGGQLTTTS----------DVENFP---------GFP-Q 115 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~-~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~---------~~~-~ 115 (382)
..+||+|||||++|+++|..|+ +.|++|+|||+ ....||.|.... ....+. .+. .
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~----~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~ 82 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDK----ADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTT 82 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEES----SSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEEC----CCCCCCcccccCCCCceecCCcceeeeccccccccCCCCccc
Confidence 4579999999999999999999 89999999994 445666554210 000000 010 1
Q ss_pred CCChHHHHHHHHHHHHHcCc--EEEEe-eEEEEEecCC--cEEEEECCe-EEEcCEEEEccC--CCCcCCCCCCCccccC
Q 016820 116 GILGGDLMDRCRNQSLRFGT--QIFTE-TVSKVDFKSR--PFKVFTDSK-SVLADTVIVATG--AVAKKLQFPGSDAFWN 187 (382)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~gi--~~~~~-~v~~i~~~~~--~~~v~~~~~-~~~~d~lvlA~G--~~~~~~~~~g~~~~~~ 187 (382)
.....++.+++.+.++++++ +++.+ +|++++.+++ .|.+.++++ ++.||+||+|+| +.|+.|++||.+.+..
T Consensus 83 ~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g 162 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEG 162 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCC
Confidence 23467899999999999998 77777 7999987765 688877554 599999999999 5899999999987766
Q ss_pred CCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc-------chHHH---HH---------
Q 016820 188 RGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR-------ASKIM---QN--------- 248 (382)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~-------~~~~~---~~--------- 248 (382)
..++...+.+.. ...+++|+|||+|.+|+|+|..|.+.+.+|+++.|.+.+. ..... .+
T Consensus 163 ~~~~~~~~~~~~--~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~ 240 (540)
T 3gwf_A 163 ETIHTAAWPEGK--SLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWER 240 (540)
T ss_dssp EEEEGGGCCSSC--CCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHH
T ss_pred CEEEeecCCCcc--ccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHH
Confidence 667777666655 5678999999999999999999999999999999998741 00000 00
Q ss_pred --------------------------------------------------------------------------------
Q 016820 249 -------------------------------------------------------------------------------- 248 (382)
Q Consensus 249 -------------------------------------------------------------------------------- 248 (382)
T Consensus 241 ~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l 320 (540)
T 3gwf_A 241 AKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKL 320 (540)
T ss_dssp HHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHH
T ss_pred HHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhC
Confidence
Q ss_pred -----------------HhccCCCcEEEc--CceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhh
Q 016820 249 -----------------RALTNPKIDVIW--NSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKF 309 (382)
Q Consensus 249 -----------------~~l~~~gv~~~~--~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~ 309 (382)
+.+.+.+|+++. ...|++|++++ |++.+ + .++++|.||+|||++++..+
T Consensus 321 ~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~g-------v~~~d---G--~~~~~DvIV~ATGf~~~~~~ 388 (540)
T 3gwf_A 321 MPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKG-------VVTED---G--VLHELDVLVFATGFDAVDGN 388 (540)
T ss_dssp CCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSE-------EEETT---C--CEEECSEEEECCCBSCSSHH
T ss_pred CCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCe-------EEcCC---C--CEEECCEEEECCccCccccC
Confidence 012356888875 67888887754 66543 4 67999999999999998754
Q ss_pred hcccccccCC----------CceeeCCCCCcCCCCceEEe-cccCCchhhHHHHHHhhHHHHHHHHHHHHHH
Q 016820 310 VDGQLDLHSD----------GYIITKPGTTHTSVPGVFAA-GDVQDKKYRQAVTAAGTGCMAALEAEHYLQE 370 (382)
Q Consensus 310 ~~~~~~~~~~----------g~i~vd~~~~~t~~~~vya~-GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~ 370 (382)
+. .+.+... +.+.........+.||+|.+ |.... -......+..|+.++++.|.+-..+
T Consensus 389 ~~-~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~-~~s~~~~~e~q~~~i~~~i~~~~~~ 458 (540)
T 3gwf_A 389 YR-RIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP-FTNLPPSIETQVEWISDTIGYAERN 458 (540)
T ss_dssp HH-TSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB-CSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cC-cceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCC-CccHHHHHHHHHHHHHHHHHHHHHC
Confidence 43 2222222 23333333455689999999 87653 2234567778888888877665543
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=9.3e-32 Score=271.04 Aligned_cols=279 Identities=18% Similarity=0.181 Sum_probs=209.0
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHc-C
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRF-G 134 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g 134 (382)
..++||+|||||++|+++|+.|++.|++|+||| +....||.+.... .+|+ .....++.+++...+.++ +
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE----~~~~~GG~~~~~~---~~p~---~~~~~~~~~~~~~~~~~~~g 458 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAE----AGRDLGGRVTQES---ALPG---LSAWGRVKEYREAVLAELPN 458 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC----SSSSSCTHHHHHH---TSTT---CGGGGHHHHHHHHHHHTCTT
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEe----cCCCCCCEeeecc---CCCc---hhHHHHHHHHHHHHHHHcCC
Confidence 356899999999999999999999999999999 5556777765421 2222 234577888888888887 8
Q ss_pred cEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCC--------CcCCCCCCCccccCCCcceeeeccCCCCCCCCC
Q 016820 135 TQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAV--------AKKLQFPGSDAFWNRGISACAVCDGAAPIFRDK 206 (382)
Q Consensus 135 i~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~--------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (382)
++++.++. +.. .+..++.||+||+|||+. |..|++||.+.. ............ ...++
T Consensus 459 v~~~~~~~--v~~--------~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~--~v~~~~~~l~~~--~~~g~ 524 (690)
T 3k30_A 459 VEIYRESP--MTG--------DDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGM--QVLGPDDLFAGR--LPDGK 524 (690)
T ss_dssp EEEESSCC--CCH--------HHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTS--EEECHHHHHTTC--CCSSS
T ss_pred CEEEECCe--ecH--------HHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCC--cEEcHHHHhCCC--CCCCC
Confidence 98877631 110 012347899999999998 446777776531 112222333333 45678
Q ss_pred cEEEEc--CCchHHHHHHHHhhcCCEEEEEEeCCCCcc------hHHHHHHhccCCCcEEEcCceeEEEEecCCceeeee
Q 016820 207 PLAVIG--GGDSAMEEANFLTKYGSKVYIIHRRDSFRA------SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGG 278 (382)
Q Consensus 207 ~v~VvG--~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~ 278 (382)
+++||| +|.+|+|+|..|.+.|.+|+++++.+.+.. ......+.+++.||+++.++++.+++.++
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~------- 597 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGG------- 597 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTE-------
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCe-------
Confidence 899999 999999999999999999999999887632 12333466788999999999999998654
Q ss_pred EEEEeccCCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchhhHHHHHHhhHH
Q 016820 279 LKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGC 358 (382)
Q Consensus 279 v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~ 358 (382)
+.+....++++.++++|.|++|+|++|+..++. .+. ..+. +|+.|+||++|||+. ++.+..|+.||+
T Consensus 598 ~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~-~l~--~~~~--------~t~~~~VyaiGD~~~--~~~~~~A~~~g~ 664 (690)
T 3k30_A 598 VTVRDTYASIERELECDAVVMVTARLPREELYL-DLV--ARRD--------AGEIASVRGIGDAWA--PGTIAAAVWSGR 664 (690)
T ss_dssp EEEEETTTCCEEEEECSEEEEESCEEECCHHHH-HHH--HHHH--------HTSCSEEEECGGGTS--CBCHHHHHHHHH
T ss_pred EEEEEccCCeEEEEECCEEEECCCCCCChHHHH-HHh--hhhc--------ccCCCCEEEEeCCCc--hhhHHHHHHHHH
Confidence 455543345667899999999999999998775 221 1111 678999999999996 356777999999
Q ss_pred HHHHHHHHHHHHccCccccc
Q 016820 359 MAALEAEHYLQEIGSQEDKS 378 (382)
Q Consensus 359 ~aa~~i~~~l~~~~~~~~~~ 378 (382)
.+|.+|...|.+++..++..
T Consensus 665 ~aa~~i~~~l~g~~~~p~~~ 684 (690)
T 3k30_A 665 RAAEEFDAVLPSNDEVPFRR 684 (690)
T ss_dssp HHHHHTTCCCCCTTSCSSCC
T ss_pred HHHHHHHhhccCCCCCCcCh
Confidence 99999999988877665544
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=1.2e-31 Score=271.31 Aligned_cols=275 Identities=21% Similarity=0.218 Sum_probs=195.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHc---
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRF--- 133 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 133 (382)
..+||+|||||++|+++|..|++.|++|+||| +....||.+..... +|+++ ....+.+++...++.+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie----~~~~~GG~~~~~~~---~pg~~---~~~~~~~~~~~~i~~~~~~ 457 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTD----TAEKIGGHLNQVAA---LPGLG---EWSYHRDYRETQITKLLKK 457 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEEC----SSSSTTTTHHHHTT---STTCG---GGHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEe----CCCCcCCeeeeccc---CCChH---HHHHHHHHHHHHHHHhhcc
Confidence 45899999999999999999999999999999 45567887764322 23322 2345555555555443
Q ss_pred ---CcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCC--------CcCCCCCCCccccCCCcceeeeccCCCCC
Q 016820 134 ---GTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAV--------AKKLQFPGSDAFWNRGISACAVCDGAAPI 202 (382)
Q Consensus 134 ---gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~--------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 202 (382)
++++..+ ..+.+. +...+.||+||+|||+. |+.|++||.+.+.........++... .
T Consensus 458 ~~~~v~i~~~---------~~v~~~-~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~--~ 525 (729)
T 1o94_A 458 NKESQLALGQ---------KPMTAD-DVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGK--K 525 (729)
T ss_dssp STTCEEECSC---------CCCCHH-HHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCC--S
T ss_pred cCCceEEEeC---------eEEehh-hccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCC--C
Confidence 3443222 111111 22347899999999997 56678888764322222223333433 4
Q ss_pred CCCCcEEEEc--CCchHHHHHHHHhhcCCEEEEEEeCCCCcc------hHHHHHHhccCCCcEEEcCceeEEEEecCCce
Q 016820 203 FRDKPLAVIG--GGDSAMEEANFLTKYGSKVYIIHRRDSFRA------SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKK 274 (382)
Q Consensus 203 ~~~~~v~VvG--~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~ 274 (382)
..+++|+||| +|.+|+|+|..|.++|.+|+++++.+ +.. ......+.+++.||+++.++.+.+++.+.
T Consensus 526 ~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~--- 601 (729)
T 1o94_A 526 KIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLEYPNMMRRLHELHVEELGDHFCSRIEPGR--- 601 (729)
T ss_dssp CCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTCHHHHHHHHHHTTCEEECSEEEEEEETTE---
T ss_pred CCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccccccHHHHHHHHHhCCCEEEcCcEEEEEECCe---
Confidence 4578999999 99999999999999999999999988 422 12333456778899999999999998542
Q ss_pred eeeeEEEEeccCC------------------ceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCce
Q 016820 275 VLGGLKVKNLVTG------------------QVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGV 336 (382)
Q Consensus 275 ~~~~v~~~~~~~~------------------~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~v 336 (382)
+.+.....+ +...+++|.|++++|.+|++.++. .+.. .+|+ +++|+.|+|
T Consensus 602 ----v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~-~l~~------~vd~-~~~t~~~~V 669 (729)
T 1o94_A 602 ----MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWN-ELKA------RESE-WAENDIKGI 669 (729)
T ss_dssp ----EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHH-HHHH------TGGG-TGGGTCCEE
T ss_pred ----EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHH-HHhh------hccc-ccccCCCCe
Confidence 334321111 123499999999999999998765 3321 2566 678999999
Q ss_pred EEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHc
Q 016820 337 FAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 371 (382)
Q Consensus 337 ya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~ 371 (382)
||+|||+. ++.+..|+.+|+.+|.+|..++...
T Consensus 670 yAiGD~~~--~~~~~~A~~~G~~aA~~i~~~l~~~ 702 (729)
T 1o94_A 670 YLIGDAEA--PRLIADATFTGHRVAREIEEANPQI 702 (729)
T ss_dssp EECGGGTS--CCCHHHHHHHHHHHHHTTTSSCTTS
T ss_pred EEEeCccc--hhhHHHHHHHHHHHHHHhhhhcccC
Confidence 99999986 4678889999999999998876543
No 88
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.96 E-value=6e-28 Score=236.13 Aligned_cols=294 Identities=15% Similarity=0.203 Sum_probs=204.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCc----------------c----cCCCCCCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDV----------------E----NFPGFPQG 116 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~----------------~----~~~~~~~~ 116 (382)
..+||+|||||++|+.+|+.|++.|++|+||| +....||.|...... . .+......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE----~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~ 83 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIE----AGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENF 83 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEe----CCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccC
Confidence 45799999999999999999999999999999 445667765421100 0 00001123
Q ss_pred CChHHHHHHHHHHHHHcCc--EEEEe-eEEEEEecC--CcEEEEECCe-EEEcCEEEEccC--CCCcCCCCCCCccccCC
Q 016820 117 ILGGDLMDRCRNQSLRFGT--QIFTE-TVSKVDFKS--RPFKVFTDSK-SVLADTVIVATG--AVAKKLQFPGSDAFWNR 188 (382)
Q Consensus 117 ~~~~~~~~~~~~~~~~~gi--~~~~~-~v~~i~~~~--~~~~v~~~~~-~~~~d~lvlA~G--~~~~~~~~~g~~~~~~~ 188 (382)
....++.+++++.++++++ ++..+ +|++++.++ +.|.+.++++ ++.||+||+|+| +.|+.|++||.+.+...
T Consensus 84 ~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~ 163 (545)
T 3uox_A 84 ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGE 163 (545)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSE
T ss_pred CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCC
Confidence 4678999999999999987 66666 688887654 4678877554 699999999999 78999999999887666
Q ss_pred CcceeeeccC-------CCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-------hHH----HH---
Q 016820 189 GISACAVCDG-------AAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-------SKI----MQ--- 247 (382)
Q Consensus 189 ~~~~~~~~~~-------~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-------~~~----~~--- 247 (382)
.++...+... . ...+++|+|||+|.+|+|+|..|.+.+.+|+++.|.+.+.. ... +.
T Consensus 164 ~~h~~~~~~~~~~~~~~~--~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~ 241 (545)
T 3uox_A 164 SFHSSRWPTDAEGAPKGV--DFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRY 241 (545)
T ss_dssp EEEGGGCCBCTTSCBSCC--CCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHHHTH
T ss_pred eEEccccccccccccccc--ccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHHhhh
Confidence 6666666554 3 45689999999999999999999999999999999987410 000 00
Q ss_pred --------------------------------------------------------------------------------
Q 016820 248 -------------------------------------------------------------------------------- 247 (382)
Q Consensus 248 -------------------------------------------------------------------------------- 247 (382)
T Consensus 242 p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~ 321 (545)
T 3uox_A 242 PTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPV 321 (545)
T ss_dssp HHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHH
T ss_pred HHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHH
Confidence
Q ss_pred -----------------------HHhccCCCcEEEc--CceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeC
Q 016820 248 -----------------------NRALTNPKIDVIW--NSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIG 302 (382)
Q Consensus 248 -----------------------~~~l~~~gv~~~~--~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G 302 (382)
-+.+.+.+|+++. ...|++|++++ |.+.+ + ++++|.||+|||
T Consensus 322 ~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~g-------v~~~d-----G-~~~~D~IV~ATG 388 (545)
T 3uox_A 322 VAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEG-------IKTAD-----A-AYDLDVIIYATG 388 (545)
T ss_dssp HHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTE-------EEESS-----C-EEECSEEEECCC
T ss_pred HHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCe-------EEeCC-----C-eeecCEEEECCc
Confidence 0112344778775 67788887654 66543 4 799999999999
Q ss_pred CCCChhhhcccccccCCCceeeCC----------CCCcCCCCceEEecccCCc--hhhHHHHHHhhHHHHHHHHHHHHHH
Q 016820 303 HEPATKFVDGQLDLHSDGYIITKP----------GTTHTSVPGVFAAGDVQDK--KYRQAVTAAGTGCMAALEAEHYLQE 370 (382)
Q Consensus 303 ~~p~~~~~~~~~~~~~~g~i~vd~----------~~~~t~~~~vya~GD~~~~--~~~~~~~a~~~g~~aa~~i~~~l~~ 370 (382)
+++.+.++. .+.+...+...+++ .....+.||+|.+.--..+ -......+..|+.++++.|.+-..+
T Consensus 389 f~~~~~~~~-~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~~~ 467 (545)
T 3uox_A 389 FDAVTGSLD-RIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDN 467 (545)
T ss_dssp CBSSSCSCT-TSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCC-CceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHHHHHC
Confidence 998765544 33332222222221 2345689999998543321 1234567778888888877665554
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=4.8e-29 Score=250.66 Aligned_cols=256 Identities=22% Similarity=0.276 Sum_probs=188.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+||+|||||++|+++|..|++.|++|+||| +....||.+..... + |......++.+++.+.+++++++
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie----~~~~~gg~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~gv~ 441 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFD----AHSEIGGQFNIAKQ---I---PGKEEFYETLRYYRRMIEVTGVT 441 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEE----SSSSSCTTHHHHTT---S---TTCTTHHHHHHHHHHHHHHHTCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEe----CCCCCCCeeecccc---C---CCHHHHHHHHHHHHHHHHHcCCE
Confidence 45899999999999999999999999999999 44556776653221 1 22233456677788888889999
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEE-EcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCc
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSV-LADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGD 215 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~-~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~ 215 (382)
++.++.... ..+ .||+||+|||++|+.|++||.+.. ........+... ...+++|+|||+|.
T Consensus 442 ~~~~~~v~~-------------~~~~~~d~lviAtG~~p~~~~i~G~~~~--~v~~~~~~l~~~--~~~~~~VvVIGgG~ 504 (671)
T 1ps9_A 442 LKLNHTVTA-------------DQLQAFDETILASGIVPRTPPIDGIDHP--KVLSYLDVLRDK--APVGNKVAIIGCGG 504 (671)
T ss_dssp EEESCCCCS-------------SSSCCSSEEEECCCEEECCCCCBTTTST--TEEEHHHHHTSC--CCCCSEEEEECCHH
T ss_pred EEeCcEecH-------------HHhhcCCEEEEccCCCcCCCCCCCCCCC--cEeeHHHHhhCC--CCCCCeEEEECCCh
Confidence 988852111 113 899999999999999999987641 122222333333 44689999999999
Q ss_pred hHHHHHHHHhhcCC-------------------------------------EEEEEEeCCCCc------chHHHHHHhcc
Q 016820 216 SAMEEANFLTKYGS-------------------------------------KVYIIHRRDSFR------ASKIMQNRALT 252 (382)
Q Consensus 216 ~a~e~a~~l~~~g~-------------------------------------~v~~~~~~~~~~------~~~~~~~~~l~ 252 (382)
+|+|+|..|.+.|. +|+++.+.+... .......+.++
T Consensus 505 ~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~ 584 (671)
T 1ps9_A 505 IGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLL 584 (671)
T ss_dssp HHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHH
Confidence 99999999998763 566676654321 12233346677
Q ss_pred CCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCC
Q 016820 253 NPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTS 332 (382)
Q Consensus 253 ~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~ 332 (382)
+.||+++.++.+.+++.+. +.+. .+++..++++|.|++++|++|++.++. .+. ..
T Consensus 585 ~~GV~v~~~~~v~~i~~~~-------v~~~--~~G~~~~i~~D~Vi~a~G~~p~~~l~~-~l~---------------~~ 639 (671)
T 1ps9_A 585 SRGVKMIPGVSYQKIDDDG-------LHVV--INGETQVLAVDNVVICAGQEPNRALAQ-PLI---------------DS 639 (671)
T ss_dssp HTTCEEECSCEEEEEETTE-------EEEE--ETTEEEEECCSEEEECCCEEECCTTHH-HHH---------------TT
T ss_pred hcCCEEEeCcEEEEEeCCe-------EEEe--cCCeEEEEeCCEEEECCCccccHHHHH-HHH---------------hc
Confidence 8899999999999998532 5553 125456899999999999999988775 221 12
Q ss_pred CCceEEecccCCchhhHHHHHHhhHHHHHHHH
Q 016820 333 VPGVFAAGDVQDKKYRQAVTAAGTGCMAALEA 364 (382)
Q Consensus 333 ~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i 364 (382)
.++||++|||+...++.+..|++||..+|.+|
T Consensus 640 g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 640 GKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp TCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 37999999998765557999999999999875
No 90
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.96 E-value=1.3e-29 Score=245.82 Aligned_cols=257 Identities=21% Similarity=0.229 Sum_probs=188.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+||+|||||++|+++|.+|++. ++|+||| +....||.+..... .+.+++. ...++...+.+.+ +.+++
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie----~~~~~GG~~~~~~~--~~~g~~~--~~~~~~~~l~~~l-~~~v~ 176 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIE----ERGWLGGDMWLKGI--KQEGFNK--DSRKVVEELVGKL-NENTK 176 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEEC----TTSSSSCSGGGTCS--EETTTTE--EHHHHHHHHHHTC-CTTEE
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEe----CCCCCCCeeecccc--ccCCCCC--CHHHHHHHHHHHH-hcCCE
Confidence 457999999999999999999999 9999999 44556776653221 1122222 3455555555444 56888
Q ss_pred EEEe-eEEEEEecCCcEEEEE--CCe--EEEcCEEEEccCCCCcCCCCCCCccccCCCcceee----eccCCCCCCCCCc
Q 016820 137 IFTE-TVSKVDFKSRPFKVFT--DSK--SVLADTVIVATGAVAKKLQFPGSDAFWNRGISACA----VCDGAAPIFRDKP 207 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~--~~~--~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~ 207 (382)
++.+ +|.+++.+++.+.+.. ++. .+.||+||+|||+.|+.|+++|.+. ..++... +.... ....+++
T Consensus 177 ~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~---~gv~~~~~~~~~~~~~-~~~~~~~ 252 (493)
T 1y56_A 177 IYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDM---PGVFRRDFALEVMNVW-EVAPGRK 252 (493)
T ss_dssp EETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTS---TTEEEHHHHHHHHHTS-CBCSCSE
T ss_pred EEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCC---CCEEEcHHHHHHHHhc-ccCCCCE
Confidence 8776 6888888877665543 333 5899999999999999988988764 1111111 11111 1335689
Q ss_pred EEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCC
Q 016820 208 LAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTG 287 (382)
Q Consensus 208 v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~ 287 (382)
++|+|+|.+++| +.+++.||+++.+..+.++..++. +..+.+ .
T Consensus 253 vvViGgG~~gle-----------------------------~~l~~~GV~v~~~~~v~~i~~~~~---v~~v~~-----~ 295 (493)
T 1y56_A 253 VAVTGSKADEVI-----------------------------QELERWGIDYVHIPNVKRVEGNEK---VERVID-----M 295 (493)
T ss_dssp EEEESTTHHHHH-----------------------------HHHHHHTCEEEECSSEEEEECSSS---CCEEEE-----T
T ss_pred EEEECCCHHHHH-----------------------------HHHHhCCcEEEeCCeeEEEecCCc---eEEEEe-----C
Confidence 999999999988 224457999999999999987653 333443 2
Q ss_pred ceEEEecCeEEEeeCCCCChhhhc-ccc--cccCCCcee-eCCCCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHH
Q 016820 288 QVSDLKVSGLFFAIGHEPATKFVD-GQL--DLHSDGYII-TKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALE 363 (382)
Q Consensus 288 ~~~~~~~D~vi~~~G~~p~~~~~~-~~~--~~~~~g~i~-vd~~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~ 363 (382)
++.++++|.|++++|.+|+..++. .++ .++++|++. +|+ +++ +.|+||++|||++. ..+..|..||+.+|.+
T Consensus 296 ~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~-~~~-s~~~vya~GD~~~~--~~~~~A~~~g~~aa~~ 371 (493)
T 1y56_A 296 NNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDE-YHR-IKDGIYVAGSAVSI--KPHYANYLEGKLVGAY 371 (493)
T ss_dssp TCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCT-TSE-EETTEEECSTTTCC--CCHHHHHHHHHHHHHH
T ss_pred CCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeecccc-ccC-cCCCEEEEeccCCc--cCHHHHHHHHHHHHHH
Confidence 236799999999999999998776 344 346788987 787 566 89999999999974 4788999999999999
Q ss_pred HHHHH
Q 016820 364 AEHYL 368 (382)
Q Consensus 364 i~~~l 368 (382)
|..++
T Consensus 372 i~~~l 376 (493)
T 1y56_A 372 ILKEF 376 (493)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 99876
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.96 E-value=1.7e-27 Score=233.10 Aligned_cols=178 Identities=21% Similarity=0.263 Sum_probs=140.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCC---C-------cccC----------CCCCCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTS---D-------VENF----------PGFPQG 116 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~---~-------~~~~----------~~~~~~ 116 (382)
..+||+|||||++|+++|..|++.|++|+||| +....||.|.... . ...+ ......
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE----~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~ 95 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFE----AASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKY 95 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEe----CCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCC
Confidence 45899999999999999999999999999999 4455666654211 0 0000 000113
Q ss_pred CChHHHHHHHHHHHHHcCc--EEEEe-eEEEEEecCC--cEEEEECCe-EEEcCEEEEccC--CCCcCCCCCCCccccCC
Q 016820 117 ILGGDLMDRCRNQSLRFGT--QIFTE-TVSKVDFKSR--PFKVFTDSK-SVLADTVIVATG--AVAKKLQFPGSDAFWNR 188 (382)
Q Consensus 117 ~~~~~~~~~~~~~~~~~gi--~~~~~-~v~~i~~~~~--~~~v~~~~~-~~~~d~lvlA~G--~~~~~~~~~g~~~~~~~ 188 (382)
....++.+++++.++++++ +++.+ +|++++.+++ .|.+.++++ ++.||+||+|+| +.|+.|++||.+.+...
T Consensus 96 ~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~ 175 (549)
T 4ap3_A 96 ATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGD 175 (549)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSE
T ss_pred CCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCc
Confidence 4568999999999999998 67777 7999987765 678877554 599999999999 78999999999877666
Q ss_pred Ccceeeec-cCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 189 GISACAVC-DGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 189 ~~~~~~~~-~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
.++...+. +.. ...+++|+|||+|.+|+|+|..|.+.+.+|+++.|.+.+
T Consensus 176 ~~~~~~~~~~~~--~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 176 IVHTARWPHDGV--DFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp EEEGGGCCTTCC--CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred eEEecccccccc--ccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 66766665 333 457899999999999999999999999999999999874
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.96 E-value=5.5e-27 Score=230.14 Aligned_cols=296 Identities=15% Similarity=0.198 Sum_probs=206.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecC---C-------CcccCC---------CC-CCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTT---S-------DVENFP---------GF-PQG 116 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~---~-------~~~~~~---------~~-~~~ 116 (382)
..+||+|||||++|+++|+.|++.|++|+|||+ ...+||.|... . ....+. .+ ...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~----~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~ 90 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIET----AGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERY 90 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECS----SSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeC----CCCCCCcccccCCCceeecccccccccccChhhhhccCccccc
Confidence 358999999999999999999999999999994 44556655311 0 000000 01 123
Q ss_pred CChHHHHHHHHHHHHHcC--cEEEEe-eEEEEEecC--CcEEEEECCe-EEEcCEEEEccCC--CCcCCCCCCCccccCC
Q 016820 117 ILGGDLMDRCRNQSLRFG--TQIFTE-TVSKVDFKS--RPFKVFTDSK-SVLADTVIVATGA--VAKKLQFPGSDAFWNR 188 (382)
Q Consensus 117 ~~~~~~~~~~~~~~~~~g--i~~~~~-~v~~i~~~~--~~~~v~~~~~-~~~~d~lvlA~G~--~~~~~~~~g~~~~~~~ 188 (382)
....++.+++...+++++ .+++.+ +|.+++.++ +.|.+.++++ ++.+|+||+|+|. .|+.|.+||.+.+.+.
T Consensus 91 ~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~ 170 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGN 170 (542)
T ss_dssp CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSE
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCc
Confidence 456788999999888876 456667 688888765 3688877554 7999999999995 6888899998776665
Q ss_pred CcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc-------chHHHH--------------
Q 016820 189 GISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR-------ASKIMQ-------------- 247 (382)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~-------~~~~~~-------------- 247 (382)
.++...+..... ...+++|+|||+|.+|++++..|.+.+.+|+++.|.+.+. ......
T Consensus 171 ~~hs~~~~~~~~-~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~ 249 (542)
T 1w4x_A 171 LYHTGNWPHEPV-DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREES 249 (542)
T ss_dssp EEEGGGCCSSCC-CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHH
T ss_pred eEECCCCCCchh-ccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHHHHH
Confidence 566665552211 4568999999999999999999999999999999887551 000000
Q ss_pred ----------------------------------------------------------------H---------------
Q 016820 248 ----------------------------------------------------------------N--------------- 248 (382)
Q Consensus 248 ----------------------------------------------------------------~--------------- 248 (382)
+
T Consensus 250 ~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~ 329 (542)
T 1w4x_A 250 RNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPK 329 (542)
T ss_dssp HTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCC
T ss_pred HhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCC
Confidence 0
Q ss_pred ----------------HhccCCCcEEE--cCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh
Q 016820 249 ----------------RALTNPKIDVI--WNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV 310 (382)
Q Consensus 249 ----------------~~l~~~gv~~~--~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~ 310 (382)
+.+.+.+|+++ .+..|++++++. |.+. + .++++|.||+|||+++++.++
T Consensus 330 ~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~g-------v~~~-----d-~~~~~D~ii~atG~~~~~~~~ 396 (542)
T 1w4x_A 330 GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRG-------VRTS-----E-REYELDSLVLATGFDALTGAL 396 (542)
T ss_dssp SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSE-------EEES-----S-CEEECSEEEECCCCCCTTHHH
T ss_pred CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCe-------EEeC-----C-eEEecCEEEEcCCccccccCc
Confidence 01122456665 355677776433 5543 2 579999999999999987665
Q ss_pred ccccccc-CCCceeeC---------CCCCcCCCCceEEe-cccCCch-hhHHHHHHhhHHHHHHHHHHHHHHc
Q 016820 311 DGQLDLH-SDGYIITK---------PGTTHTSVPGVFAA-GDVQDKK-YRQAVTAAGTGCMAALEAEHYLQEI 371 (382)
Q Consensus 311 ~~~~~~~-~~g~i~vd---------~~~~~t~~~~vya~-GD~~~~~-~~~~~~a~~~g~~aa~~i~~~l~~~ 371 (382)
. .+.+. .+|....+ ......+.||+|++ |+.+... ...+..+..|+..++++|.+...+.
T Consensus 397 ~-~~~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~~~~ 468 (542)
T 1w4x_A 397 F-KIDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNG 468 (542)
T ss_dssp H-TSEEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred C-ceeeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5 34322 23333332 11334578999998 9986432 2345788999999999998887654
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.90 E-value=4e-22 Score=193.48 Aligned_cols=307 Identities=19% Similarity=0.139 Sum_probs=187.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcC--------------CCeEEEecccCCCCCCCcceecCC-------Ccc-------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAE--------------LKPILFEGWMANDIAPGGQLTTTS-------DVE------- 108 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g--------------~~v~lie~~~~~~~~~gg~~~~~~-------~~~------- 108 (382)
..+||||||+||+||++|..|.+.| .....+|+.....+..|..+.... +..
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s 117 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRS 117 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCC
Confidence 4589999999999999999998763 356778865444444333222111 000
Q ss_pred cC---------------CCC-CCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecC--------CcEEEEECC-----
Q 016820 109 NF---------------PGF-PQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKS--------RPFKVFTDS----- 158 (382)
Q Consensus 109 ~~---------------~~~-~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~--------~~~~v~~~~----- 158 (382)
.| +.. ...+...++.+|+++++++++..+.++ +|+++.+.+ +.|+|.+.+
T Consensus 118 ~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~ 197 (501)
T 4b63_A 118 SFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGE 197 (501)
T ss_dssp TTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCC
T ss_pred ccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCce
Confidence 00 000 124577899999999999998888888 688887643 247776521
Q ss_pred -eEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeecc------CCCCCCCCCcEEEEcCCchHHHHHHHHhhc--CC
Q 016820 159 -KSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCD------GAAPIFRDKPLAVIGGGDSAMEEANFLTKY--GS 229 (382)
Q Consensus 159 -~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~--g~ 229 (382)
.++.++.||+|+|..|+.|..++ +..+.+|...+.+ .. ...+|+|+|||+|.+|+|++..|.+. +.
T Consensus 198 ~~~~~ar~vVlatG~~P~iP~~~~---~~g~v~Hss~y~~~~~~~~~~--~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~ 272 (501)
T 4b63_A 198 ISARRTRKVVIAIGGTAKMPSGLP---QDPRIIHSSKYCTTLPALLKD--KSKPYNIAVLGSGQSAAEIFHDLQKRYPNS 272 (501)
T ss_dssp EEEEEEEEEEECCCCEECCCTTSC---CCTTEEEGGGHHHHHHHHSCC--TTSCCEEEEECCSHHHHHHHHHHHHHSTTC
T ss_pred EEEEEeCEEEECcCCCCCCCCCCC---CCcceeeccccccchhhcccc--ccCCcEEEEECCcHHHHHHHHHHHhcCCCc
Confidence 35889999999998877765443 3345566666543 22 46789999999999999999999875 68
Q ss_pred EEEEEEeCCCCcch---------------HH---------------------------HHH--------Hhcc-----CC
Q 016820 230 KVYIIHRRDSFRAS---------------KI---------------------------MQN--------RALT-----NP 254 (382)
Q Consensus 230 ~v~~~~~~~~~~~~---------------~~---------------------------~~~--------~~l~-----~~ 254 (382)
+|+++.|++.+... .. +.+ +.+. ..
T Consensus 273 ~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~ 352 (501)
T 4b63_A 273 RTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQW 352 (501)
T ss_dssp EEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGC
T ss_pred eEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCccccc
Confidence 99999998765110 00 000 0000 01
Q ss_pred CcEEEcCceeEEEEecCCceeeeeEEEEe-------ccCCceEEEecCeEEEeeCCCCChh-hhc---ccccccCCCcee
Q 016820 255 KIDVIWNSVVLEAYGEGDKKVLGGLKVKN-------LVTGQVSDLKVSGLFFAIGHEPATK-FVD---GQLDLHSDGYII 323 (382)
Q Consensus 255 gv~~~~~~~v~~i~~~~~g~~~~~v~~~~-------~~~~~~~~~~~D~vi~~~G~~p~~~-~~~---~~~~~~~~g~i~ 323 (382)
...+..+..+..+........+ .+.+.. ...+++.++++|.||+|||++++.+ ++. ..+..+..|.+.
T Consensus 353 ~~~l~~~~~v~~~~~~~~~~~~-~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~ 431 (501)
T 4b63_A 353 QHRILPERKITRVEHHGPQSRM-RIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWK 431 (501)
T ss_dssp SSEEECSEEEEEEECCSSSSCE-EEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCC
T ss_pred ceeecCCcceeeeeecCCCCeE-EEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCee
Confidence 1245555666666554321101 122111 1123446799999999999998764 222 245567778888
Q ss_pred eCCCCCcC-------CCCceEEecccCC---c-hhhHHHHHHhhHHHHHHHHHHHHH
Q 016820 324 TKPGTTHT-------SVPGVFAAGDVQD---K-KYRQAVTAAGTGCMAALEAEHYLQ 369 (382)
Q Consensus 324 vd~~~~~t-------~~~~vya~GD~~~---~-~~~~~~~a~~~g~~aa~~i~~~l~ 369 (382)
|+.++... ..++||+-|-+-. . .+-....|.+.|.++..-..+.+-
T Consensus 432 v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~~~l~g~~~~ 488 (501)
T 4b63_A 432 PHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMVQSIFGEQLE 488 (501)
T ss_dssp BCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHHHHHHHHHHH
T ss_pred eCCCcEEeecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHHHHHHhcchhh
Confidence 88744321 2467999985421 0 122233455555544333333333
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.86 E-value=7.6e-21 Score=159.40 Aligned_cols=155 Identities=25% Similarity=0.249 Sum_probs=124.2
Q ss_pred cEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc----------------hH---HHHHHhccCCCcEEEcCceeEEE
Q 016820 207 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA----------------SK---IMQNRALTNPKIDVIWNSVVLEA 267 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~----------------~~---~~~~~~l~~~gv~~~~~~~v~~i 267 (382)
+++|||+|++|+++|..|.+.|.+|+++++.+.... .. ....+.+++.|++++.+ ++.++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 699999999999999999999999999998764321 11 22234566789999999 99999
Q ss_pred EecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCchh
Q 016820 268 YGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKY 347 (382)
Q Consensus 268 ~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~~ 347 (382)
+.++++ +.+.. .++ ++++|.+|+|+|.+|+..- ..++.++ +|++.||+ .++|+.|+|||+|||+..+.
T Consensus 82 ~~~~~~-----~~v~~---~~g-~i~ad~vI~A~G~~~~~~~-~~g~~~~-~g~i~vd~-~~~t~~~~i~a~GD~~~~~~ 149 (180)
T 2ywl_A 82 RDMGGV-----FEVET---EEG-VEKAERLLLCTHKDPTLPS-LLGLTRR-GAYIDTDE-GGRTSYPRVYAAGVARGKVP 149 (180)
T ss_dssp EECSSS-----EEEEC---SSC-EEEEEEEEECCTTCCHHHH-HHTCCEE-TTEECCCT-TCBCSSTTEEECGGGGTCCS
T ss_pred EEcCCE-----EEEEE---CCC-EEEECEEEECCCCCCCccc-cCCCCcc-CceEEeCC-CCCcCCCCEEEeecccCcch
Confidence 987654 44443 223 7999999999999986421 2367777 89999998 78899999999999998654
Q ss_pred hHHHHHHhhHHHHHHHHHHHHHHccCc
Q 016820 348 RQAVTAAGTGCMAALEAEHYLQEIGSQ 374 (382)
Q Consensus 348 ~~~~~a~~~g~~aa~~i~~~l~~~~~~ 374 (382)
+++..|+.+|+.+|.+|...+.++...
T Consensus 150 ~~~~~A~~~g~~aa~~i~~~~~~~~~~ 176 (180)
T 2ywl_A 150 GHAIISAGDGAYVAVHLVSDLRGEPYK 176 (180)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred hhHHHHHHhHHHHHHHHHHHhhhcccc
Confidence 588999999999999999999876543
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.77 E-value=7.3e-22 Score=181.59 Aligned_cols=255 Identities=14% Similarity=0.055 Sum_probs=163.4
Q ss_pred cccccEEEECCcHHHHHHHHHHHH--cCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHc
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAAR--AELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~--~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
...+||+||||||||++||++|++ .|++|+||| +...+||.+....... ....+.....+.++++
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viE----k~~~~GG~~~~~~~~~---------~~~~l~~~~~~~~~e~ 129 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE----SSVAPGGGSWLGGQLF---------SAMVMRKPAHLFLQEL 129 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEEC----SSSSCCTTTTCCSTTC---------CCEEEETTTHHHHHHT
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEE----CCCCCCceEEeCCccC---------CHHHHHHHHHHHHHHc
Confidence 356899999999999999999975 499999999 5556777765432111 1111112233445677
Q ss_pred CcEEEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcC
Q 016820 134 GTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGG 213 (382)
Q Consensus 134 gi~~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~ 213 (382)
|+++..+. ......+.++++++..++.+.++|...+.......+...... ...+++++|+|+
T Consensus 130 Gv~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~v~vigg 191 (326)
T 3fpz_A 130 EIPYEDEG----------------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPT--EKGEVTVAGVVT 191 (326)
T ss_dssp TCCCEECS----------------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSC--SSSSCEEEEEEE
T ss_pred CCEEEECC----------------cceecceeEEEEcchhhhccccccceeecccccceeeccCCc--ccCCCEEEEEcc
Confidence 87764321 122344556667777777778888887766666666666666 677899999999
Q ss_pred CchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEe
Q 016820 214 GDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLK 293 (382)
Q Consensus 214 G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~ 293 (382)
|.++++.+..+...+.++++..+......... +.... ..+......+. ..... .....+.
T Consensus 192 g~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~-----~~~~~------~~~~~~~g~~~------~~~~~---~~~~~~~ 251 (326)
T 3fpz_A 192 NWTLVTQAHGTQCAMDPNVIELAGYKNDGTRD-----LSQKH------GVILSTTGHDG------PFGAF---CAKRIVD 251 (326)
T ss_dssp EEHHHHTCTTSSSCCCCEEEEESCBCTTSSBC-----TTSCC------CEEEECCCSCS------SSCSH---HHHHHHH
T ss_pred CceeeehhhhhhhccCcEEEEeeccccccccc-----ceeec------ceEEEEeccee------eEeec---ceeEEEe
Confidence 99999999999999999998887665432111 11100 01111111111 00000 1123456
Q ss_pred cCeEEEeeCCCCChhhhcccccccCCCceeeCCCCCcCCCCceEEecccCCch-----h-hHHHHHHhhHHHHHHHHHHH
Q 016820 294 VSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKK-----Y-RQAVTAAGTGCMAALEAEHY 367 (382)
Q Consensus 294 ~D~vi~~~G~~p~~~~~~~~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~~~-----~-~~~~~a~~~g~~aa~~i~~~ 367 (382)
+|.+....|.++...... .+.+.+|. .++|+.|+||++||++... . +....++.+|+.||+.|.++
T Consensus 252 ~~~~~~~~g~~~~~~~~~-------e~~iv~~~-~~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~ 323 (326)
T 3fpz_A 252 IDQNQKLGGMKGLDMNHA-------EHDVVIHS-GAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp HCTTCCCCCCCCBCHHHH-------HHHHHHHC-EECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHH
T ss_pred cCceeeecceeccccccc-------CCeEEECC-CeEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHH
Confidence 677777777776433222 24455565 6889999999999987411 1 12334567899999999999
Q ss_pred HH
Q 016820 368 LQ 369 (382)
Q Consensus 368 l~ 369 (382)
|.
T Consensus 324 la 325 (326)
T 3fpz_A 324 FA 325 (326)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.72 E-value=1.1e-17 Score=157.50 Aligned_cols=113 Identities=22% Similarity=0.287 Sum_probs=83.5
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCC--------cceecCC--Cc--ccCC--------------
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPG--------GQLTTTS--DV--ENFP-------------- 111 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~g--------g~~~~~~--~~--~~~~-------------- 111 (382)
.+||+|||||++|+++|+.|++.|.+|+|+|+. ..+| +.+.... .. ..++
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~----~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNG----KKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYT 79 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSS----SSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSC
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCC----CCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCC
Confidence 589999999999999999999999999999953 2232 2221000 00 0000
Q ss_pred -----------C-----------CCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEec----CCcEEEEECCeEEEcC
Q 016820 112 -----------G-----------FPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFK----SRPFKVFTDSKSVLAD 164 (382)
Q Consensus 112 -----------~-----------~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~----~~~~~v~~~~~~~~~d 164 (382)
+ +|.. ...++.+.+.+.+++.|++++.+ +|+++..+ ++.+.+.++++++++|
T Consensus 80 ~~~~~~~~~~~Gi~~~~~~~g~~~p~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g~i~ad 158 (401)
T 2gqf_A 80 NWDFISLVAEQGITYHEKELGQLFCDE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCK 158 (401)
T ss_dssp HHHHHHHHHHTTCCEEECSTTEEEETT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTEEEEES
T ss_pred HHHHHHHHHhCCCceEECcCCEEccCC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCCEEECC
Confidence 0 0111 46778888999999999999988 69899866 5668888877789999
Q ss_pred EEEEccCCCCc
Q 016820 165 TVIVATGAVAK 175 (382)
Q Consensus 165 ~lvlA~G~~~~ 175 (382)
+||+|+|..+.
T Consensus 159 ~VVlAtG~~s~ 169 (401)
T 2gqf_A 159 NLIVATGGLSM 169 (401)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999999873
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.70 E-value=1.8e-18 Score=166.56 Aligned_cols=279 Identities=17% Similarity=0.209 Sum_probs=155.0
Q ss_pred cEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCC---CCCcceecCC--C----------------------------
Q 016820 60 KVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDI---APGGQLTTTS--D---------------------------- 106 (382)
Q Consensus 60 ~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~---~~gg~~~~~~--~---------------------------- 106 (382)
||+|||||++|+++|..|++.|.+|+|+|+....+. ..|+...... +
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 799999999999999999999999999997411110 0011000000 0
Q ss_pred ------------------cccCCCC--C-----CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcE---EEEEC
Q 016820 107 ------------------VENFPGF--P-----QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPF---KVFTD 157 (382)
Q Consensus 107 ------------------~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~---~v~~~ 157 (382)
....++. + ......++.+.+.+.+++.|++++.+ .| ++..+++.+ .+.++
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~ 159 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKR 159 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeC
Confidence 0000000 0 01234677888888888889999998 58 987766654 23224
Q ss_pred CeEEEcCEEEEccCCCCcCCCCCCCc-cccCCCccee-----eeccCCCCCCCCC-cEEEEcCCchHHHHHHHHhhcCCE
Q 016820 158 SKSVLADTVIVATGAVAKKLQFPGSD-AFWNRGISAC-----AVCDGAAPIFRDK-PLAVIGGGDSAMEEANFLTKYGSK 230 (382)
Q Consensus 158 ~~~~~~d~lvlA~G~~~~~~~~~g~~-~~~~~~~~~~-----~~~~~~~~~~~~~-~v~VvG~G~~a~e~a~~l~~~g~~ 230 (382)
++++.+|.||+|||..+..+.++... ...+..+..+ ...+.. ..... .++++|+| +++++..+...|..
T Consensus 160 ~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e--~~q~~p~~~~~ggg--~~~~ae~~~~~G~~ 235 (472)
T 2e5v_A 160 GLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADME--FVQFHPTVTSLDGE--VFLLTETLRGEGAQ 235 (472)
T ss_dssp EEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTT--CEEEEEEEECGGGC--CEECCTHHHHTTCE
T ss_pred CCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCc--ceEEEeEEEccCCC--ceeeehhhcCCceE
Confidence 45688999999999988766543221 1112211111 011111 11111 23445665 67777777777877
Q ss_pred EEEEEeCCCCcc--------------hHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEe-cC
Q 016820 231 VYIIHRRDSFRA--------------SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLK-VS 295 (382)
Q Consensus 231 v~~~~~~~~~~~--------------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~-~D 295 (382)
+ +..+.+++.. +..+.++ +++.+. ++.+. .. +.. + ...++ .|
T Consensus 236 ~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~-~~~~~~-v~ld~-------~~----~~~--~-------~~~~~~~~ 292 (472)
T 2e5v_A 236 I-INENGERFLFNYDKRGELAPRDILSRAIYIE-MLKGHK-VFIDL-------SK----IED--F-------ERKFPVVA 292 (472)
T ss_dssp E-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHH-HHHTCC-EEEEC-------TT----CTT--H-------HHHCHHHH
T ss_pred E-ECCCCCCCCccCCcccCcCchhHHHHHHHHH-HHhCCc-EEEec-------cc----hHH--H-------HHHhHHHH
Confidence 7 6666666631 1122222 222221 21111 00 000 0 01233 46
Q ss_pred eEEEeeCCCCChhhhcc-cccccCCCceeeCCCCCcCCCCceEEecccCC-ch---hhHHHHHHhhHHHHHHHHHHHH
Q 016820 296 GLFFAIGHEPATKFVDG-QLDLHSDGYIITKPGTTHTSVPGVFAAGDVQD-KK---YRQAVTAAGTGCMAALEAEHYL 368 (382)
Q Consensus 296 ~vi~~~G~~p~~~~~~~-~~~~~~~g~i~vd~~~~~t~~~~vya~GD~~~-~~---~~~~~~a~~~g~~aa~~i~~~l 368 (382)
.++...|..|+ ..+.. .......|+|.||+ .++|+.|+|||+|||++ .. .+.+..+..++...++.+.+.+
T Consensus 293 ~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~-~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~ 368 (472)
T 2e5v_A 293 KYLARHGHNYK-VKIPIFPAAHFVDGGIRVNI-RGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYV 368 (472)
T ss_dssp HHHHHTTCCTT-SCEECEEEEEEESCEEECCT-TCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTT
T ss_pred HHHHHhCcCcc-cceEeehhhceeCCCeEECC-CCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 66777899998 54441 12233479999999 78999999999999976 21 1334444444444444444443
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.69 E-value=2.1e-16 Score=137.80 Aligned_cols=116 Identities=18% Similarity=0.185 Sum_probs=82.1
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCC-----------CCCChHHHHHHH
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFP-----------QGILGGDLMDRC 126 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 126 (382)
.+||+|||||++|+++|..|+++|.+|+|||+.. ...| +... ..+..+. .+....++.+++
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~---~~~G--~~~~---~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l 74 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL---DAVM--MPFL---PPKPPFPPGSLLERAYDPKDERVWAFHARA 74 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG---GGTT--CCSS---CCCSCCCTTCHHHHHCCTTCCCHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC---CcCC--cccC---ccccccchhhHHhhhccCCCCCHHHHHHHH
Confidence 5899999999999999999999999999999631 1222 1110 0011110 011345778888
Q ss_pred HHHHHHc-CcEEEEeeEEEEEecCCcE-EEEECC-eEEEcCEEEEccCCCCcCCCCCC
Q 016820 127 RNQSLRF-GTQIFTETVSKVDFKSRPF-KVFTDS-KSVLADTVIVATGAVAKKLQFPG 181 (382)
Q Consensus 127 ~~~~~~~-gi~~~~~~v~~i~~~~~~~-~v~~~~-~~~~~d~lvlA~G~~~~~~~~~g 181 (382)
.+.+++. |++++..+|+++..+++.+ .+.+++ .++++|+||+|+|..+.....+|
T Consensus 75 ~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G 132 (232)
T 2cul_A 75 KYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLG 132 (232)
T ss_dssp HHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEET
T ss_pred HHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecC
Confidence 8888887 9999876899998776654 455544 47999999999999765443333
No 99
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.58 E-value=2.8e-14 Score=119.14 Aligned_cols=111 Identities=26% Similarity=0.415 Sum_probs=91.0
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEEE
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIF 138 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~ 138 (382)
+||+|||||++|+++|..|++.|.+|+|+|+.. +.+........++++|......++.+++.+.+++.|++++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~ 74 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR-------SKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVR 74 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-------CTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-------CcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 689999999999999999999999999999532 1111122334456666667789999999999999999999
Q ss_pred EeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcC
Q 016820 139 TETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKK 176 (382)
Q Consensus 139 ~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~ 176 (382)
.++|++++.+++.+.+.++++++.+|.||+|+|.+|+.
T Consensus 75 ~~~v~~i~~~~~~~~v~~~~g~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 75 PGVVKGVRDMGGVFEVETEEGVEKAERLLLCTHKDPTL 112 (180)
T ss_dssp ECCCCEEEECSSSEEEECSSCEEEEEEEEECCTTCCHH
T ss_pred eCEEEEEEEcCCEEEEEECCCEEEECEEEECCCCCCCc
Confidence 88999998877778887766689999999999999854
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.57 E-value=1.5e-13 Score=134.60 Aligned_cols=158 Identities=20% Similarity=0.183 Sum_probs=102.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccC--CC----CCCCccee--cCCCcccCCC----------------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMA--ND----IAPGGQLT--TTSDVENFPG---------------- 112 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~--~~----~~~gg~~~--~~~~~~~~~~---------------- 112 (382)
..+||+|||||+||+++|..|++.|.+|+|||+... .. ...|+... .......+.+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 458999999999999999999999999999996421 00 00011000 0000000000
Q ss_pred ----CC------CCCChHHHHHHHHHHHHH-cCcEEEEeeEEEEEecCCcE-EEEEC-CeEEEcCEEEEccCCCCcCCCC
Q 016820 113 ----FP------QGILGGDLMDRCRNQSLR-FGTQIFTETVSKVDFKSRPF-KVFTD-SKSVLADTVIVATGAVAKKLQF 179 (382)
Q Consensus 113 ----~~------~~~~~~~~~~~~~~~~~~-~gi~~~~~~v~~i~~~~~~~-~v~~~-~~~~~~d~lvlA~G~~~~~~~~ 179 (382)
.+ .......+...+.+.+++ .|++++.++|+++..+++.+ .|.+. +..+.+|.||+|||..+..+.+
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCccc
Confidence 00 012345677888888887 69999777899998766654 45554 4569999999999999887777
Q ss_pred CCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEe
Q 016820 180 PGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHR 236 (382)
Q Consensus 180 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~ 236 (382)
+|...+ .+.+ +| |.++++++..|.+.|.+|+.+..
T Consensus 187 ~G~~~~------------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 187 IGLDNY------------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp CC-----------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred cCcccC------------------CCCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 776531 0122 56 78899999999999999988853
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.53 E-value=4e-13 Score=131.12 Aligned_cols=159 Identities=18% Similarity=0.181 Sum_probs=106.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccC--CC----CCCCcc----ee-----cCCCc--------ccC---
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMA--ND----IAPGGQ----LT-----TTSDV--------ENF--- 110 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~--~~----~~~gg~----~~-----~~~~~--------~~~--- 110 (382)
..+||+|||||+||++||..|++.|.+|+|||+... .. ...|+. +. ....+ ..+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 358999999999999999999999999999996421 00 000110 00 00000 000
Q ss_pred -----CCCC---CCCChHHHHHHHHHHHHH-cCcEEEEeeEEEEEecCCcE-EEEEC-CeEEEcCEEEEccCCCCcCCCC
Q 016820 111 -----PGFP---QGILGGDLMDRCRNQSLR-FGTQIFTETVSKVDFKSRPF-KVFTD-SKSVLADTVIVATGAVAKKLQF 179 (382)
Q Consensus 111 -----~~~~---~~~~~~~~~~~~~~~~~~-~gi~~~~~~v~~i~~~~~~~-~v~~~-~~~~~~d~lvlA~G~~~~~~~~ 179 (382)
+... .......+.+.+.+.+++ .|++++..+|+++..+++.+ .|.+. +..+.++.||+|||..++.+.+
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCEEE
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCcee
Confidence 0000 012446778888888887 59999777899998776654 35554 4579999999999999888777
Q ss_pred CCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeC
Q 016820 180 PGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRR 237 (382)
Q Consensus 180 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~ 237 (382)
+|...+. ..+ + |+..+++++..|.+.|.++..+.+.
T Consensus 186 ~G~~~~~------------------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~tg 221 (637)
T 2zxi_A 186 IGDKMIP------------------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKTG 221 (637)
T ss_dssp ETTEEEE------------------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEEE
T ss_pred ccceecC------------------CCC---C-CchhHHHHHHHHHhcCCceEEecCC
Confidence 7764321 111 2 3667899999999999887766543
No 102
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.45 E-value=9.2e-13 Score=129.02 Aligned_cols=159 Identities=21% Similarity=0.210 Sum_probs=103.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccC--CC----CCCCcc----ee-----cCCCc--------ccC---
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMA--ND----IAPGGQ----LT-----TTSDV--------ENF--- 110 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~--~~----~~~gg~----~~-----~~~~~--------~~~--- 110 (382)
..+||+|||||+||+++|..|++.|.+|+|+|+... .. ...|+. +. ..... ..|
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 458999999999999999999999999999996420 00 000100 00 00000 000
Q ss_pred -----CCCC---CCCChHHHHHHHHHHHHHc-CcEEEEeeEEEEEecCCcEE-EEEC-CeEEEcCEEEEccCCCCcCCCC
Q 016820 111 -----PGFP---QGILGGDLMDRCRNQSLRF-GTQIFTETVSKVDFKSRPFK-VFTD-SKSVLADTVIVATGAVAKKLQF 179 (382)
Q Consensus 111 -----~~~~---~~~~~~~~~~~~~~~~~~~-gi~~~~~~v~~i~~~~~~~~-v~~~-~~~~~~d~lvlA~G~~~~~~~~ 179 (382)
+... .......+...+.+.+++. |++++.++|.++..+++.+. +.+. +..+.+|.||+|||.+++.+.+
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i~ 179 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLIH 179 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCccce
Confidence 0000 0134457888888888875 99998778999887777654 5553 4579999999999998876544
Q ss_pred CCCccccCCCcceeeeccCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEe
Q 016820 180 PGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHR 236 (382)
Q Consensus 180 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~ 236 (382)
+|...+. ..+++ |+..+++++..|.+.|.+|..+..
T Consensus 180 ~G~~~~~------------------~g~~v---G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 180 IGMDHFP------------------GGRST---AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp ETTEEEE------------------CSSST---TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred eeeeeec------------------ccccc---CCchhhhhHHHHHhCCceEEeecC
Confidence 4433210 01111 357788999999999998876644
No 103
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.34 E-value=6.9e-12 Score=118.42 Aligned_cols=116 Identities=26% Similarity=0.328 Sum_probs=84.8
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcc--------eecCC---Cccc----CCCC-------
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQ--------LTTTS---DVEN----FPGF------- 113 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~--------~~~~~---~~~~----~~~~------- 113 (382)
+..+||+|||||++|+++|+.|++.|++|+|+|+. ..+|+. +.... .... .+.+
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~----~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~ 100 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHA----RAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALAR 100 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSS----SSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC----CCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHh
Confidence 34689999999999999999999999999999953 333322 11110 0000 0000
Q ss_pred ---------------C----------CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEE
Q 016820 114 ---------------P----------QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVI 167 (382)
Q Consensus 114 ---------------~----------~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lv 167 (382)
+ ......++.+.+.+.+++.|++++.+ +|+++..+++.+.+.++++++++|+||
T Consensus 101 ~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g~i~ad~VI 180 (417)
T 3v76_A 101 YRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLV 180 (417)
T ss_dssp SCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTEEEEESEEE
T ss_pred cCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCcEEEeeEEE
Confidence 0 01244678888888899999999998 799999888888898888899999999
Q ss_pred EccCCCCc
Q 016820 168 VATGAVAK 175 (382)
Q Consensus 168 lA~G~~~~ 175 (382)
+|+|..+.
T Consensus 181 lAtG~~S~ 188 (417)
T 3v76_A 181 VASGGKSI 188 (417)
T ss_dssp ECCCCSSC
T ss_pred ECCCCccC
Confidence 99999863
No 104
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.21 E-value=3.5e-11 Score=116.99 Aligned_cols=129 Identities=12% Similarity=0.006 Sum_probs=98.3
Q ss_pred cccccccccccccccc--CCCCCCCcccccccccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecC
Q 016820 27 IVTTSSAAAAASFSAT--TAPKISNAMDEIQTLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTT 104 (382)
Q Consensus 27 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~ 104 (382)
++||+.+..|+..... ...+++.... .+..+.+++|||||+.|+++|..++++|.+|+|+++.
T Consensus 191 IATGs~P~~P~~~~~~~~~~~ts~~~l~-l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-------------- 255 (542)
T 4b1b_A 191 IATGCRPHIPDDVEGAKELSITSDDIFS-LKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-------------- 255 (542)
T ss_dssp ECCCEEECCCSSSBTHHHHCBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS--------------
T ss_pred eccCCCCCCCCcccCCCccccCchhhhc-cccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc--------------
Confidence 6799888766544433 2233333222 3346789999999999999999999999999999831
Q ss_pred CCcccCCCCCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEEC-CeEEEcCEEEEccCCCCcCCC
Q 016820 105 SDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTD-SKSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~-~~~~~~d~lvlA~G~~~~~~~ 178 (382)
..+ ....+++.+.+++.+++.|++++.+ .+..+...++.+.+... +..+.+|.|++|+|.+|+...
T Consensus 256 ---~~L-----~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~ 323 (542)
T 4b1b_A 256 ---IVL-----RGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDG 323 (542)
T ss_dssp ---CSS-----TTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGG
T ss_pred ---ccc-----cccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccc
Confidence 011 1235788999999999999999999 68899888888777664 456889999999999998764
No 105
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.17 E-value=1.6e-10 Score=109.50 Aligned_cols=121 Identities=21% Similarity=0.236 Sum_probs=84.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecC------------------------------CC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTT------------------------------SD 106 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~------------------------------~~ 106 (382)
..+||+|||||++|+++|+.|++.|++|+|+|+........|..+... ..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKE 83 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCe
Confidence 358999999999999999999999999999997432111222211000 00
Q ss_pred cc--cC-------CCCCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcE--EEEECCe---EEEcCEEEEccC
Q 016820 107 VE--NF-------PGFPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPF--KVFTDSK---SVLADTVIVATG 171 (382)
Q Consensus 107 ~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~--~v~~~~~---~~~~d~lvlA~G 171 (382)
.. .+ ......+....+...+.+.+.+.|++++.+ +|++++.+++.+ .+.++++ ++++|.||.|+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G 163 (421)
T 3nix_A 84 IADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASG 163 (421)
T ss_dssp EEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCG
T ss_pred eEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCC
Confidence 00 00 011113567788899999999999999998 799998876654 4444443 499999999999
Q ss_pred CCCcCC
Q 016820 172 AVAKKL 177 (382)
Q Consensus 172 ~~~~~~ 177 (382)
..+...
T Consensus 164 ~~s~l~ 169 (421)
T 3nix_A 164 YGRVIP 169 (421)
T ss_dssp GGCHHH
T ss_pred CchhhH
Confidence 876443
No 106
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.15 E-value=2.4e-10 Score=112.21 Aligned_cols=120 Identities=15% Similarity=0.129 Sum_probs=83.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCC-CCc----------------------------c-eec---
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIA-PGG----------------------------Q-LTT--- 103 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~-~gg----------------------------~-~~~--- 103 (382)
..+||+|||||++|+++|+.|++.|++|+|||+....... .+. . +..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 4589999999999999999999999999999974221100 000 0 000
Q ss_pred -CCCcccCC-C--CCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEE--CCe--EEEcCEEEEccCCCC
Q 016820 104 -TSDVENFP-G--FPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFT--DSK--SVLADTVIVATGAVA 174 (382)
Q Consensus 104 -~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~--~~~--~~~~d~lvlA~G~~~ 174 (382)
......+. . +...+....+.+.+.+.+.+.|++++.+ +|++++.+++.+.+.. .++ ++++|+||.|+|.++
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 00000000 0 1123567888899999998899999888 7999988888877766 444 699999999999976
Q ss_pred cC
Q 016820 175 KK 176 (382)
Q Consensus 175 ~~ 176 (382)
..
T Consensus 208 ~v 209 (570)
T 3fmw_A 208 TV 209 (570)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 107
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.15 E-value=4.1e-10 Score=100.86 Aligned_cols=118 Identities=17% Similarity=0.204 Sum_probs=78.1
Q ss_pred cccccEEEECCcHHHHHHHHHHHHc-CCCeEEEecccCCCCCCCcceecCCCc-ccC------------CCCCC------
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARA-ELKPILFEGWMANDIAPGGQLTTTSDV-ENF------------PGFPQ------ 115 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~-g~~v~lie~~~~~~~~~gg~~~~~~~~-~~~------------~~~~~------ 115 (382)
...+||+|||||++|+++|..|++. |.+|+|+|+. ..+|+........ ..+ .+.+.
T Consensus 37 ~~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~----~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~ 112 (284)
T 1rp0_A 37 YAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQS----VSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTY 112 (284)
T ss_dssp HTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESS----SSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSE
T ss_pred ccccCEEEECccHHHHHHHHHHHHcCCCeEEEEECC----CCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCE
Confidence 3468999999999999999999997 9999999963 2222211100000 000 00110
Q ss_pred --CCChHHHHHHHHHHHHH-cCcEEEEe-eEEEEEecCCcE-EEEE----------CC-----eEEEcCEEEEccCCCCc
Q 016820 116 --GILGGDLMDRCRNQSLR-FGTQIFTE-TVSKVDFKSRPF-KVFT----------DS-----KSVLADTVIVATGAVAK 175 (382)
Q Consensus 116 --~~~~~~~~~~~~~~~~~-~gi~~~~~-~v~~i~~~~~~~-~v~~----------~~-----~~~~~d~lvlA~G~~~~ 175 (382)
.....++...+.+.+.+ .|++++.+ +|+++..+++.+ .+.. ++ .++++|.||+|+|..+.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 113 VVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp EEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred EEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 11446677777776665 69999998 799998776643 2222 11 56999999999999876
Q ss_pred CC
Q 016820 176 KL 177 (382)
Q Consensus 176 ~~ 177 (382)
..
T Consensus 193 ~~ 194 (284)
T 1rp0_A 193 FG 194 (284)
T ss_dssp TT
T ss_pred HH
Confidence 54
No 108
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.14 E-value=2.2e-10 Score=110.88 Aligned_cols=121 Identities=19% Similarity=0.114 Sum_probs=83.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceec-CCC--------------cccCCC-CCCCCChH
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTT-TSD--------------VENFPG-FPQGILGG 120 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~-~~~--------------~~~~~~-~~~~~~~~ 120 (382)
..+||+|||||++|+++|..|++.|++|+|||+. ...|+.... ... ...+.. ....+...
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~----~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 166 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKR----IKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIR 166 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC----SSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEec----cccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHH
Confidence 4689999999999999999999999999999953 222221000 000 000000 00113447
Q ss_pred HHHHHHHHHHHHcCcEEEEe-eEEEEEec---CCcEEEEE--C-Ce---EEEcCEEEEccCCCCcCCCCCC
Q 016820 121 DLMDRCRNQSLRFGTQIFTE-TVSKVDFK---SRPFKVFT--D-SK---SVLADTVIVATGAVAKKLQFPG 181 (382)
Q Consensus 121 ~~~~~~~~~~~~~gi~~~~~-~v~~i~~~---~~~~~v~~--~-~~---~~~~d~lvlA~G~~~~~~~~~g 181 (382)
++.+.+.+.+++.|++++.+ +|+++..+ ++.+.+.+ . ++ ++++|+||+|+|..+....+.+
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccccccc
Confidence 88888988888899999998 79999864 34566655 2 33 5899999999999887654433
No 109
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.13 E-value=2.3e-10 Score=107.14 Aligned_cols=120 Identities=21% Similarity=0.202 Sum_probs=81.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCC--CCCCCcceecC--------CCc-----------ccCCC---
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMAN--DIAPGGQLTTT--------SDV-----------ENFPG--- 112 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~--~~~~gg~~~~~--------~~~-----------~~~~~--- 112 (382)
..+||+||||||+|+++|+.|++.|++|+|+|+.... ...+|+.+... ... ...+.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCce
Confidence 4599999999999999999999999999999974321 12223322100 000 00000
Q ss_pred ------------CCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEE---EECC--eEEEcCEEEEccCCCC
Q 016820 113 ------------FPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKV---FTDS--KSVLADTVIVATGAVA 174 (382)
Q Consensus 113 ------------~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v---~~~~--~~~~~d~lvlA~G~~~ 174 (382)
....+....+...+.+.+.+.|++++.+ +++++..+++.+.. ..++ .++++|.||.|.|..+
T Consensus 83 ~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp CEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 0012356788888999999999999988 68888777765432 2233 3489999999999876
Q ss_pred cC
Q 016820 175 KK 176 (382)
Q Consensus 175 ~~ 176 (382)
..
T Consensus 163 ~v 164 (397)
T 3oz2_A 163 EF 164 (397)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 110
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.13 E-value=1.6e-10 Score=103.63 Aligned_cols=165 Identities=15% Similarity=0.124 Sum_probs=111.6
Q ss_pred CcEEEEcCCchHHHHHHHHhhc-CCEEEEEEeCCCCc----------------------------------------chH
Q 016820 206 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRDSFR----------------------------------------ASK 244 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~-g~~v~~~~~~~~~~----------------------------------------~~~ 244 (382)
.+|+|||+|.+|+.+|..|.+. |.+|+++++.+.+. ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 99999999876431 111
Q ss_pred ----HHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEec---------cCCceEEEecCeEEEeeCCCCChhhhc
Q 016820 245 ----IMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNL---------VTGQVSDLKVSGLFFAIGHEPATKFVD 311 (382)
Q Consensus 245 ----~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~---------~~~~~~~~~~D~vi~~~G~~p~~~~~~ 311 (382)
.+.++..++.|++++.++.+.++..+++. +.++.+... ..++...+.+|.+|+|+|..+......
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~--v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNR--VGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTE--EEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCe--EEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 23333344579999999999999876542 445666421 012236799999999999887654322
Q ss_pred ------cc--ccccCCCceeeCC------CCCcCCCCceEEecccCCc------hhhHHHHHHhhHHHHHHHHHHHHHHc
Q 016820 312 ------GQ--LDLHSDGYIITKP------GTTHTSVPGVFAAGDVQDK------KYRQAVTAAGTGCMAALEAEHYLQEI 371 (382)
Q Consensus 312 ------~~--~~~~~~g~i~vd~------~~~~t~~~~vya~GD~~~~------~~~~~~~a~~~g~~aa~~i~~~l~~~ 371 (382)
.+ +.+.....+.++. ....+..|++|++||+... ..+....+..+|+.+|.+|.++|...
T Consensus 198 ~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~~ 277 (284)
T 1rp0_A 198 VKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLP 277 (284)
T ss_dssp HHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhhh
Confidence 01 1122222333331 0124567999999998631 11235678899999999999998644
Q ss_pred c
Q 016820 372 G 372 (382)
Q Consensus 372 ~ 372 (382)
+
T Consensus 278 ~ 278 (284)
T 1rp0_A 278 N 278 (284)
T ss_dssp C
T ss_pred h
Confidence 3
No 111
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.13 E-value=2.4e-10 Score=107.57 Aligned_cols=120 Identities=15% Similarity=0.090 Sum_probs=84.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCC-CCCccee-----------------------------cC-C
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDI-APGGQLT-----------------------------TT-S 105 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~-~~gg~~~-----------------------------~~-~ 105 (382)
.++||+|||||++|+++|..|++.|++|+|+|+...... ..+..+. .. .
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g 84 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDG 84 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCC
Confidence 458999999999999999999999999999997422110 0111000 00 0
Q ss_pred -CcccCC-------CCCCCCChHHHHHHHHHHHHHc-CcEEEEe-eEEEEEecCCcE--EEEECC-eEEEcCEEEEccCC
Q 016820 106 -DVENFP-------GFPQGILGGDLMDRCRNQSLRF-GTQIFTE-TVSKVDFKSRPF--KVFTDS-KSVLADTVIVATGA 172 (382)
Q Consensus 106 -~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-gi~~~~~-~v~~i~~~~~~~--~v~~~~-~~~~~d~lvlA~G~ 172 (382)
....++ .+...+...++.+.+.+.+.+. |++++.+ +|++++.+++.+ .+.+.+ .++++|.||.|+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCT
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCC
Confidence 000000 0011356678899999999888 9999988 799999887777 777654 47999999999999
Q ss_pred CCcC
Q 016820 173 VAKK 176 (382)
Q Consensus 173 ~~~~ 176 (382)
++..
T Consensus 165 ~s~v 168 (399)
T 2x3n_A 165 ASYV 168 (399)
T ss_dssp TCHH
T ss_pred ChHH
Confidence 7653
No 112
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.12 E-value=2.3e-10 Score=109.37 Aligned_cols=114 Identities=23% Similarity=0.375 Sum_probs=81.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcc--------eecCC--Cc----ccCC-----------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQ--------LTTTS--DV----ENFP----------- 111 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~--------~~~~~--~~----~~~~----------- 111 (382)
..+||+|||||++|+++|+.|++.|.+|+|+|+.. .+|+. +.... .. ..++
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~----~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN----KLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFS 100 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS----SSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC----CCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHH
Confidence 45899999999999999999999999999999632 22221 10000 00 0000
Q ss_pred --------------C-----------CCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCc-EEEEECCe-EEEc
Q 016820 112 --------------G-----------FPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRP-FKVFTDSK-SVLA 163 (382)
Q Consensus 112 --------------~-----------~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~-~~v~~~~~-~~~~ 163 (382)
+ +|.......+.+.+.+.+++.|++++.+ +|+++..+++. +.+.++++ ++++
T Consensus 101 ~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~A 180 (447)
T 2i0z_A 101 IFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLET 180 (447)
T ss_dssp HSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEEC
T ss_pred hcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEEC
Confidence 0 0111134678888888888999999988 69999876665 66776555 4999
Q ss_pred CEEEEccCCCC
Q 016820 164 DTVIVATGAVA 174 (382)
Q Consensus 164 d~lvlA~G~~~ 174 (382)
|.||+|+|..+
T Consensus 181 d~VVlAtGg~s 191 (447)
T 2i0z_A 181 NHVVIAVGGKS 191 (447)
T ss_dssp SCEEECCCCSS
T ss_pred CEEEECCCCCc
Confidence 99999999977
No 113
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.12 E-value=2.4e-10 Score=106.76 Aligned_cols=58 Identities=22% Similarity=0.249 Sum_probs=49.6
Q ss_pred CChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCC
Q 016820 117 ILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVA 174 (382)
Q Consensus 117 ~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~ 174 (382)
+...++.+.+.+.+.+.|++++.+ +|+++..+++.+.+.++++++.+|.||+|+|..+
T Consensus 161 ~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 161 VEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGVWS 219 (382)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTEEEEEEEEEECCGGGT
T ss_pred EcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCceEEcCEEEECCChhH
Confidence 345778888999999999999988 6999988877788887777899999999999864
No 114
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.11 E-value=9.7e-12 Score=118.29 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=64.9
Q ss_pred HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeC--------CCCChhhhcc-cc
Q 016820 244 KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIG--------HEPATKFVDG-QL 314 (382)
Q Consensus 244 ~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G--------~~p~~~~~~~-~~ 314 (382)
..+.+.++++.| +++++++|++|+.++++ +.+.. .++..+.+|.||+++| +.|+.+.... .+
T Consensus 207 ~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~-----v~v~~---~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~ 277 (431)
T 3k7m_X 207 ADLVDAMSQEIP-EIRLQTVVTGIDQSGDV-----VNVTV---KDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVI 277 (431)
T ss_dssp HHHHHHHHTTCS-CEESSCCEEEEECSSSS-----EEEEE---TTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHH
T ss_pred HHHHHHHHhhCC-ceEeCCEEEEEEEcCCe-----EEEEE---CCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHH
Confidence 344556677778 99999999999987765 55554 2334699999999999 8887765441 22
Q ss_pred c-ccCCCceeeCCCCCcCCCCceEEecccC
Q 016820 315 D-LHSDGYIITKPGTTHTSVPGVFAAGDVQ 343 (382)
Q Consensus 315 ~-~~~~g~i~vd~~~~~t~~~~vya~GD~~ 343 (382)
. ......+.|+. .+++..+++|++||+.
T Consensus 278 ~~~~~~~~~kv~~-~~~~~~~~i~~~~d~~ 306 (431)
T 3k7m_X 278 EEGHGGQGLKILI-HVRGAEAGIECVGDGI 306 (431)
T ss_dssp HHCCCCCEEEEEE-EEESCCTTEEEEBSSS
T ss_pred HhCCCcceEEEEE-EECCCCcCceEcCCCC
Confidence 2 12234578887 6778889999999984
No 115
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.10 E-value=7.7e-10 Score=107.54 Aligned_cols=121 Identities=20% Similarity=0.205 Sum_probs=84.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecC-------------------------------C
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTT-------------------------------S 105 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~-------------------------------~ 105 (382)
.++||+|||||++|+++|+.|++.|++|+|||+........|..+... .
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 458999999999999999999999999999997532221222211000 0
Q ss_pred Cc----ccCC-------CCCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCc---EEEEEC-C--eEEEcCEEE
Q 016820 106 DV----ENFP-------GFPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRP---FKVFTD-S--KSVLADTVI 167 (382)
Q Consensus 106 ~~----~~~~-------~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~---~~v~~~-~--~~~~~d~lv 167 (382)
.. ..+. .....+....+.+.+.+.+.+.|++++.+ +|+++..+++. +.+... + .++++|.||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI 165 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIV 165 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEE
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEE
Confidence 00 0000 00112567788899999999999999988 79999887764 344443 3 269999999
Q ss_pred EccCCCCcCC
Q 016820 168 VATGAVAKKL 177 (382)
Q Consensus 168 lA~G~~~~~~ 177 (382)
.|+|.++...
T Consensus 166 ~AdG~~S~vr 175 (512)
T 3e1t_A 166 DASGNRTRVS 175 (512)
T ss_dssp ECCCTTCSSG
T ss_pred ECCCcchHHH
Confidence 9999987544
No 116
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.10 E-value=4.2e-10 Score=105.58 Aligned_cols=119 Identities=20% Similarity=0.212 Sum_probs=82.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCC--CCCCccee--------c--C----------------CCc-
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMAND--IAPGGQLT--------T--T----------------SDV- 107 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~--~~~gg~~~--------~--~----------------~~~- 107 (382)
..+||+|||||++|+++|+.|++.|++|+|+|+..... ...++.+. . . ...
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCE
Confidence 35899999999999999999999999999999743211 12222111 0 0 000
Q ss_pred -ccCCC------CCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEE-EEE----CCeEEEcCEEEEccCCCC
Q 016820 108 -ENFPG------FPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFK-VFT----DSKSVLADTVIVATGAVA 174 (382)
Q Consensus 108 -~~~~~------~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~-v~~----~~~~~~~d~lvlA~G~~~ 174 (382)
..+.. ....+....+.+.+.+.+.+.|++++.+ +|+++..+++.+. +.+ ++.++++|.||.|+|.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp CEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 00000 0012355678888999888899999988 7999988877665 554 234699999999999876
Q ss_pred c
Q 016820 175 K 175 (382)
Q Consensus 175 ~ 175 (382)
.
T Consensus 163 ~ 163 (397)
T 3cgv_A 163 E 163 (397)
T ss_dssp H
T ss_pred H
Confidence 3
No 117
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.09 E-value=4.8e-10 Score=109.67 Aligned_cols=120 Identities=14% Similarity=0.104 Sum_probs=84.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcc-------------------------------e---e
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQ-------------------------------L---T 102 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~-------------------------------~---~ 102 (382)
..+||+|||||++|+++|+.|+++|++|+|||+.........+. + .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 45899999999999999999999999999999743211100000 0 0
Q ss_pred c-C--C-Cc--------------cc-CCCCCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCC----cEEEEECC
Q 016820 103 T-T--S-DV--------------EN-FPGFPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSR----PFKVFTDS 158 (382)
Q Consensus 103 ~-~--~-~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~----~~~v~~~~ 158 (382)
. . . .. .. .+.....+....+...+.+.+.+.|++++.+ +|+++..+++ .+.+...+
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~ 163 (535)
T 3ihg_A 84 AESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAG 163 (535)
T ss_dssp ESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEE
T ss_pred EeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEc
Confidence 0 0 0 00 00 1111224567888999999999999999988 7999988877 77665533
Q ss_pred ----eEEEcCEEEEccCCCCcC
Q 016820 159 ----KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 159 ----~~~~~d~lvlA~G~~~~~ 176 (382)
.++++|+||.|+|.++..
T Consensus 164 ~~~~~~i~a~~vV~AdG~~S~v 185 (535)
T 3ihg_A 164 PDGEYDLRAGYLVGADGNRSLV 185 (535)
T ss_dssp TTEEEEEEEEEEEECCCTTCHH
T ss_pred CCCeEEEEeCEEEECCCCcchH
Confidence 569999999999998643
No 118
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.07 E-value=5.9e-10 Score=106.76 Aligned_cols=101 Identities=18% Similarity=0.169 Sum_probs=81.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||||++|+++|..|++.|.+|+++|+.. . .+| ....++.+.+.+.+++.|++
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~----~------------~l~-----~~~~~~~~~l~~~l~~~Gv~ 224 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD----R------------ILP-----TMDLEVSRAAERVFKKQGLT 224 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS----S------------SCT-----TSCHHHHHHHHHHHHHHTCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC----c------------ccc-----ccCHHHHHHHHHHHHHCCCE
Confidence 35789999999999999999999999999999410 0 011 13467888888888999999
Q ss_pred EEEe-eEEEEEecCCcEEEEE-CCeEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ +|.+++.+++.+.+.+ ++.++.+|.||+|+|.+|+.+.
T Consensus 225 i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 225 IRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTT
T ss_pred EEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCC
Confidence 9998 7999998777777765 4557999999999999988754
No 119
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.07 E-value=4.5e-10 Score=105.95 Aligned_cols=120 Identities=15% Similarity=0.141 Sum_probs=80.9
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee------------------------------cCC
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT------------------------------TTS 105 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~------------------------------~~~ 105 (382)
..++||+|||||++|+++|+.|++.|++|+|||+.........+... ...
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 100 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFR 100 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECC
Confidence 35689999999999999999999999999999974321111001000 000
Q ss_pred --C-cccC---------CCCCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECC-eEEEcCEEEEccC
Q 016820 106 --D-VENF---------PGFPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDS-KSVLADTVIVATG 171 (382)
Q Consensus 106 --~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~-~~~~~d~lvlA~G 171 (382)
. ...+ ......+....+.+.+.+.+.+ ++++.+ +|++++.+++.+.+.+.+ .++.+|.||.|+|
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 101 SGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp TCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCC
T ss_pred CCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCC
Confidence 0 0000 0111123556777888887766 778888 699999888888887754 5699999999999
Q ss_pred CCCcCC
Q 016820 172 AVAKKL 177 (382)
Q Consensus 172 ~~~~~~ 177 (382)
.++...
T Consensus 179 ~~S~vr 184 (407)
T 3rp8_A 179 SHSALR 184 (407)
T ss_dssp TTCSSH
T ss_pred cChHHH
Confidence 976543
No 120
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.07 E-value=1e-09 Score=106.13 Aligned_cols=120 Identities=16% Similarity=0.150 Sum_probs=83.7
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcc-ee-----------------c--CCC---------
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQ-LT-----------------T--TSD--------- 106 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~-~~-----------------~--~~~--------- 106 (382)
...+||+|||||++|+++|..|++.|++|+|||+.........+. +. . ...
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 89 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPV 89 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceec
Confidence 356899999999999999999999999999999743221111110 00 0 000
Q ss_pred -cccCC-CCC--CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCe----EEEcCEEEEccCCCCc
Q 016820 107 -VENFP-GFP--QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSK----SVLADTVIVATGAVAK 175 (382)
Q Consensus 107 -~~~~~-~~~--~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~----~~~~d~lvlA~G~~~~ 175 (382)
...+. .++ ..+....+.+.+.+.+.+.|++++.+ +|++++.+++.+++...++ ++++|+||.|.|.++.
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 00000 011 12345778888888888899999998 7999988888777765332 6999999999999764
No 121
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.06 E-value=7.7e-10 Score=108.91 Aligned_cols=119 Identities=22% Similarity=0.247 Sum_probs=82.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee------------------------------cCCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT------------------------------TTSD 106 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~------------------------------~~~~ 106 (382)
..+||+|||||++|+++|+.|++.|++|+|||+........|..+. ....
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 101 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQD 101 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCC
Confidence 4689999999999999999999999999999974222222221100 0000
Q ss_pred c----ccCC-------CCC--CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEec-CCcEEEEE--CC--eEEEcCEEE
Q 016820 107 V----ENFP-------GFP--QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFK-SRPFKVFT--DS--KSVLADTVI 167 (382)
Q Consensus 107 ~----~~~~-------~~~--~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~-~~~~~v~~--~~--~~~~~d~lv 167 (382)
. ..+. ..+ ..+....+...+.+.+.+.|++++.+ +|+++..+ ++.+.+.+ ++ .++++|.||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 102 QAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEE
T ss_pred CccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEE
Confidence 0 0000 001 13567788899999999999999988 79999875 44555554 34 469999999
Q ss_pred EccCCCCc
Q 016820 168 VATGAVAK 175 (382)
Q Consensus 168 lA~G~~~~ 175 (382)
.|+|..+.
T Consensus 182 ~AdG~~S~ 189 (591)
T 3i3l_A 182 DAGGSGGP 189 (591)
T ss_dssp ECCGGGCH
T ss_pred ECCCCcch
Confidence 99999764
No 122
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.06 E-value=1.1e-09 Score=103.08 Aligned_cols=121 Identities=20% Similarity=0.185 Sum_probs=80.3
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCC-CCCcceecCCCc---------------------------
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDI-APGGQLTTTSDV--------------------------- 107 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~-~~gg~~~~~~~~--------------------------- 107 (382)
+.++||+|||||++|+++|..|++.|++|+|+|+...... ..|+.+......
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 103 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIAD 103 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEEC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEEC
Confidence 3568999999999999999999999999999997532111 123332211000
Q ss_pred ------ccC--C----CCCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECC-eEEEcCEEEEccCCC
Q 016820 108 ------ENF--P----GFPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDS-KSVLADTVIVATGAV 173 (382)
Q Consensus 108 ------~~~--~----~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~-~~~~~d~lvlA~G~~ 173 (382)
... + .....+...++.+.+.+.+.+ ++++.+ +|++++.+++.+.+...+ .++++|.||.|+|..
T Consensus 104 ~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 104 EKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGM 181 (398)
T ss_dssp SSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTT
T ss_pred CCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcc
Confidence 000 0 000123455666666665443 567777 799999887778887654 469999999999998
Q ss_pred CcCCC
Q 016820 174 AKKLQ 178 (382)
Q Consensus 174 ~~~~~ 178 (382)
+..-.
T Consensus 182 S~vR~ 186 (398)
T 2xdo_A 182 SKVRK 186 (398)
T ss_dssp CSCCT
T ss_pred hhHHh
Confidence 75543
No 123
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.06 E-value=1e-09 Score=106.23 Aligned_cols=120 Identities=15% Similarity=0.143 Sum_probs=82.9
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCC-Cccee-----------------c--CCCccc------
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAP-GGQLT-----------------T--TSDVEN------ 109 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~-gg~~~-----------------~--~~~~~~------ 109 (382)
...+||+|||||++|+++|..|++.|++|+|||+........ +..+. . ......
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 456899999999999999999999999999999743221111 10000 0 000000
Q ss_pred ----CC-CCC--CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCe----EEEcCEEEEccCCCCc
Q 016820 110 ----FP-GFP--QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSK----SVLADTVIVATGAVAK 175 (382)
Q Consensus 110 ----~~-~~~--~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~----~~~~d~lvlA~G~~~~ 175 (382)
+. .++ ..+....+.+.+.+.+.+.|++++.+ +|++++.+++.+++...++ ++++|+||.|.|.++.
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 00 001 12345678888888888899999998 7999988888777665322 6999999999999764
No 124
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.05 E-value=9.3e-10 Score=105.61 Aligned_cols=101 Identities=18% Similarity=0.146 Sum_probs=81.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
.+++++|||||++|+++|..|++.|.+|+|+|+. .. -+ .....++.+.+.+.+++.|++
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----~~------------~l-----~~~~~~~~~~l~~~l~~~gV~ 226 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYM----PE------------IL-----PQGDPETAALLRRALEKEGIR 226 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----SS------------SS-----TTSCHHHHHHHHHHHHHTTCE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcC----Cc------------cc-----cccCHHHHHHHHHHHHhcCCE
Confidence 4579999999999999999999999999999941 00 00 113467888888999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEE--C--Ce--EEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFT--D--SK--SVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~--~--~~--~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ ++.+++.+++.+.+.. + +. ++.+|.||+|+|.+|+...
T Consensus 227 i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 227 VRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred EEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 9998 7999987776655553 3 44 7999999999999988754
No 125
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.04 E-value=2.3e-09 Score=100.07 Aligned_cols=57 Identities=18% Similarity=0.137 Sum_probs=48.7
Q ss_pred ChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEE-EEECCeEEEcCEEEEccCCCC
Q 016820 118 LGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFK-VFTDSKSVLADTVIVATGAVA 174 (382)
Q Consensus 118 ~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~-v~~~~~~~~~d~lvlA~G~~~ 174 (382)
....+...+.+.+.+.|++++.+ +|++++.+++.+. +.++++++++|.||+|+|..+
T Consensus 147 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 147 DPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKGIIKTGIVVNATNAWA 205 (382)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTEEEECSEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCcEEECCEEEECcchhH
Confidence 45677888888889999999998 7999998877777 777777899999999999864
No 126
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.04 E-value=2.1e-09 Score=104.46 Aligned_cols=119 Identities=18% Similarity=0.332 Sum_probs=79.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCC--------------------CC--CCCcc--e-----ecCCCc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMAN--------------------DI--APGGQ--L-----TTTSDV 107 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~--------------------~~--~~gg~--~-----~~~~~~ 107 (382)
..+||+|||||++|+++|+.|++.|++|+|+|+...- .. ..+|. + ......
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~ 185 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD 185 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecc
Confidence 4589999999999999999999999999999963110 00 00110 0 000000
Q ss_pred c------------c--------CCCCCC--CCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEE-EEECC-eEEE
Q 016820 108 E------------N--------FPGFPQ--GILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFK-VFTDS-KSVL 162 (382)
Q Consensus 108 ~------------~--------~~~~~~--~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~-v~~~~-~~~~ 162 (382)
. . +...+. .....++.+.+.+.+.+.|++++.+ +|+++..+++.+. +.+++ .++.
T Consensus 186 ~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIK 265 (549)
T ss_dssp TTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEE
T ss_pred ccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEE
Confidence 0 0 000000 0112567778888888899999999 6999988776543 66554 4699
Q ss_pred cCEEEEccCCCCc
Q 016820 163 ADTVIVATGAVAK 175 (382)
Q Consensus 163 ~d~lvlA~G~~~~ 175 (382)
+|.||+|+|.+++
T Consensus 266 Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 266 SRHVVLAVGHSAR 278 (549)
T ss_dssp CSCEEECCCTTCH
T ss_pred CCEEEECCCCChh
Confidence 9999999999874
No 127
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.04 E-value=5.6e-10 Score=104.27 Aligned_cols=118 Identities=20% Similarity=0.157 Sum_probs=79.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecC---------C----------C-----------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTT---------S----------D----------- 106 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~---------~----------~----------- 106 (382)
..+||+|||||++|+++|..|++.|++|+|||+.........+..... . .
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 89 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNK 89 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCc
Confidence 357999999999999999999999999999996422211101100000 0 0
Q ss_pred -cccCC--CCC-CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEE-CCeEEEcCEEEEccCCCCcCC
Q 016820 107 -VENFP--GFP-QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 107 -~~~~~--~~~-~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~ 177 (382)
...++ +.+ ..+...++.+.+.+.+.+.|++++.+ +|++++. ++ .+.+ ++.++++|.||.|+|..+...
T Consensus 90 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~--~v~~~~g~~~~ad~vV~AdG~~s~vr 163 (379)
T 3alj_A 90 SVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-VG--RLTLQTGEVLEADLIVGADGVGSKVR 163 (379)
T ss_dssp EEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-TT--EEEETTSCEEECSEEEECCCTTCHHH
T ss_pred eeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC--EEEECCCCEEEcCEEEECCCccHHHH
Confidence 00000 000 12345788889999998899999988 6999987 33 5554 345799999999999987543
No 128
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.03 E-value=1.6e-09 Score=106.72 Aligned_cols=119 Identities=24% Similarity=0.223 Sum_probs=79.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCC---CCCCcceecCCCc--------------------------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMAND---IAPGGQLTTTSDV-------------------------- 107 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~---~~~gg~~~~~~~~-------------------------- 107 (382)
..+||+|||||++|+++|+.|++.|++|+|+|+..... ...++.+......
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 35899999999999999999999999999999642111 0111111100000
Q ss_pred -----------------------ccC------CCC--C-----CC--CChHHHHHHHHHHHHHcCcEEEEe-eEEEEEec
Q 016820 108 -----------------------ENF------PGF--P-----QG--ILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFK 148 (382)
Q Consensus 108 -----------------------~~~------~~~--~-----~~--~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~ 148 (382)
..+ .+. + .. .....+...|.+.+++.|++++.+ +|+++..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 284 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKD 284 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEc
Confidence 000 000 0 00 234678888999999999999998 69998876
Q ss_pred C-Cc---EEEEE-CCe--EEEcCEEEEccCCCCc
Q 016820 149 S-RP---FKVFT-DSK--SVLADTVIVATGAVAK 175 (382)
Q Consensus 149 ~-~~---~~v~~-~~~--~~~~d~lvlA~G~~~~ 175 (382)
+ +. +.+.. ++. ++.+|.||+|+|..+.
T Consensus 285 ~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 285 DKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp TTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 5 44 34444 444 5899999999999653
No 129
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.03 E-value=1.3e-09 Score=104.46 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=80.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|++|+++|..|++.|.+|+|+|+. ..+ ++ ....++.+.+.+.+++.|++
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----~~~------------l~-----~~~~~~~~~l~~~l~~~gv~ 227 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGA----GEI------------LS-----GFEKQMAAIIKKRLKKKGVE 227 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS----SSS------------ST-----TSCHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC----Ccc------------cc-----ccCHHHHHHHHHHHHHCCCE
Confidence 4579999999999999999999999999999941 000 11 13467888888889999999
Q ss_pred EEEe-eEEEEEecCCcEEEEE----CCeEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFT----DSKSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~----~~~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ ++.+++.+++.+.+.. ++.++.+|.||+|+|.+|+...
T Consensus 228 i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 228 VVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDE 274 (455)
T ss_dssp EEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCSS
T ss_pred EEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCc
Confidence 9998 7999987766555543 2346999999999999987653
No 130
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.01 E-value=3.2e-09 Score=104.62 Aligned_cols=119 Identities=23% Similarity=0.304 Sum_probs=81.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc------CCCeEEEecccCCCC--CCCcceec-------------------------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA------ELKPILFEGWMANDI--APGGQLTT------------------------- 103 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~------g~~v~lie~~~~~~~--~~gg~~~~------------------------- 103 (382)
..+||+|||||++|+++|+.|++. |++|+|||+...-.. ..|+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~ 113 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDR 113 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhh
Confidence 458999999999999999999999 999999997422111 11221100
Q ss_pred ----CC-CcccCCCCC---------CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCC-cEE-EEEC---------
Q 016820 104 ----TS-DVENFPGFP---------QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSR-PFK-VFTD--------- 157 (382)
Q Consensus 104 ----~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~-~~~-v~~~--------- 157 (382)
.. ....++..+ ..+...++.+.|.+.+++.|++++.+ +|+++..+++ .+. +.+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~ 193 (584)
T 2gmh_A 114 FGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGA 193 (584)
T ss_dssp EEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSC
T ss_pred eeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCC
Confidence 00 000111111 12355688899999999999999998 6999887653 343 5443
Q ss_pred -------CeEEEcCEEEEccCCCCc
Q 016820 158 -------SKSVLADTVIVATGAVAK 175 (382)
Q Consensus 158 -------~~~~~~d~lvlA~G~~~~ 175 (382)
+.++++|+||+|+|.++.
T Consensus 194 ~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 194 PKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEEEECCCEEECSEEEECCCTTCH
T ss_pred cccccCCceEEECCEEEEeeCCCch
Confidence 257999999999999764
No 131
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.01 E-value=1.4e-09 Score=102.14 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=78.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCC---------Cc----cc-------C----CC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTS---------DV----EN-------F----PG 112 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~---------~~----~~-------~----~~ 112 (382)
.++||+|||||++|+++|..|++.|++|+|+|+........|..+.... .. .. + .+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCC
Confidence 4579999999999999999999999999999975321111122111000 00 00 0 00
Q ss_pred -------CCC-CCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECC-eEEEcCEEEEccCCCCcC
Q 016820 113 -------FPQ-GILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDS-KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 113 -------~~~-~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~-~~~~~d~lvlA~G~~~~~ 176 (382)
.+. ......+.+.+.+.+ .+++++.+ +|++++.+++.+.+...+ .++++|.||.|+|.++..
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred CccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhH
Confidence 000 122345666666554 47888888 699998888888887754 469999999999997643
No 132
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.00 E-value=5.4e-09 Score=99.94 Aligned_cols=103 Identities=15% Similarity=0.179 Sum_probs=84.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|++.|.+|+++++.. .+.......++.+.+.+.+++.|++
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--------------------~~l~~~~d~~~~~~l~~~l~~~GV~ 205 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE--------------------NLLPKYFDKEMVAEVQKSLEKQAVI 205 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS--------------------SSSTTTCCHHHHHHHHHHHHTTTEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC--------------------ccccccCCHHHHHHHHHHHHHcCCE
Confidence 45789999999999999999999999999999410 0001123477888999999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQF 179 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~ 179 (382)
++.+ .|.+++..++.+.+.++++++.+|.||+|+|.+|+...+
T Consensus 206 i~~~~~v~~i~~~~~~v~v~~~~g~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 206 FHFEETVLGIEETANGIVLETSEQEISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp EEETCCEEEEEECSSCEEEEESSCEEEESEEEECSCCBCCCSSC
T ss_pred EEeCCEEEEEEccCCeEEEEECCCEEEeCEEEECcCCCCChHHH
Confidence 9998 699998766677777777799999999999999987644
No 133
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.00 E-value=5.5e-13 Score=132.20 Aligned_cols=61 Identities=10% Similarity=0.184 Sum_probs=49.9
Q ss_pred ccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc
Q 016820 251 LTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD 311 (382)
Q Consensus 251 l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~ 311 (382)
+++.|++++.++.+.+|..+++++.+.+|++.+..+++...+.+|.||+|+|..+++.++.
T Consensus 270 ~~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 270 APEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred ccCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 3445899999999999998765545788988875456667899999999999999988775
No 134
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.00 E-value=1.6e-09 Score=104.19 Aligned_cols=99 Identities=20% Similarity=0.184 Sum_probs=82.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|++.|.+|+++++. +.+ .. ...++.+.+.+.+++.|++
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--------------------~~~-l~-~~~~~~~~l~~~l~~~Gv~ 232 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGSKVTVLARN--------------------TLF-FR-EDPAIGEAVTAAFRAEGIE 232 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS--------------------CTT-TT-SCHHHHHHHHHHHHHTTCE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEEC--------------------Ccc-CC-CCHHHHHHHHHHHHhCCCE
Confidence 4579999999999999999999999999999931 000 01 3467888899999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ +|.+++.+++.+.+.++++++.+|.||+|+|.+|+..
T Consensus 233 i~~~~~v~~i~~~~~~~~v~~~~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 233 VLEHTQASQVAHMDGEFVLTTTHGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp EETTCCEEEEEEETTEEEEEETTEEEEESEEEECSCEEESCT
T ss_pred EEcCCEEEEEEEeCCEEEEEECCcEEEcCEEEECCCCCcCCC
Confidence 9988 7999988777677777778899999999999998764
No 135
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.00 E-value=3.6e-09 Score=97.99 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=47.0
Q ss_pred ChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCc-EEEEECCe---EEEcCEEEEccCCCC
Q 016820 118 LGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRP-FKVFTDSK---SVLADTVIVATGAVA 174 (382)
Q Consensus 118 ~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~-~~v~~~~~---~~~~d~lvlA~G~~~ 174 (382)
....+.+.+.+.+++.|++++.+ +|+++..+++. +.+.++++ ++++|.||+|+|.+.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 35678888888889999999988 79999887655 77777654 799999999999864
No 136
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.98 E-value=1.5e-09 Score=101.86 Aligned_cols=120 Identities=15% Similarity=0.109 Sum_probs=80.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccC---CCCCCCcceecC---------------------CCc------
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMA---NDIAPGGQLTTT---------------------SDV------ 107 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~---~~~~~gg~~~~~---------------------~~~------ 107 (382)
++||+|||||++|+++|..|++.|++|+|+|+... .....++.+... ...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 47999999999999999999999999999997431 011111111000 000
Q ss_pred --c--cC-----CCCCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecC-CcEEEEE--CCe--EEEcCEEEEccCC
Q 016820 108 --E--NF-----PGFPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKS-RPFKVFT--DSK--SVLADTVIVATGA 172 (382)
Q Consensus 108 --~--~~-----~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~-~~~~v~~--~~~--~~~~d~lvlA~G~ 172 (382)
. .+ ......+...++.+.+.+.+.+.|++++.+ +|+++..++ +.+.+.. ++. ++++|.||.|+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 82 QRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCT
T ss_pred ceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCC
Confidence 0 00 000011245677788888888889999988 799998753 4455543 555 6999999999999
Q ss_pred CCcCC
Q 016820 173 VAKKL 177 (382)
Q Consensus 173 ~~~~~ 177 (382)
++..-
T Consensus 162 ~S~vr 166 (394)
T 1k0i_A 162 HGISR 166 (394)
T ss_dssp TCSTG
T ss_pred CcHHH
Confidence 87654
No 137
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.98 E-value=1.7e-09 Score=100.85 Aligned_cols=57 Identities=18% Similarity=0.103 Sum_probs=48.9
Q ss_pred ChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCC
Q 016820 118 LGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVA 174 (382)
Q Consensus 118 ~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~ 174 (382)
....+...+.+.+++.|++++.+ .|+++..+++.+.+.++++++++|+||+|+|.+.
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSEEEEESEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCCEEEcCEEEECCChhH
Confidence 34677788888888999999987 7999988888888888888999999999999864
No 138
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.98 E-value=4.4e-09 Score=96.28 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=69.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCC--------cccCCC-----------------
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSD--------VENFPG----------------- 112 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~--------~~~~~~----------------- 112 (382)
++||+|||||++|+++|+.|++.|++|+|+|+. ..+|+.+..... ...+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~----~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS----RGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGH 77 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSS----SSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECC----CCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCC
Confidence 369999999999999999999999999999953 334433211000 000000
Q ss_pred ------------------CCC-------CCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeE-E-EcC
Q 016820 113 ------------------FPQ-------GILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKS-V-LAD 164 (382)
Q Consensus 113 ------------------~~~-------~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~-~-~~d 164 (382)
... ......+.+.+ .+ +++++.+ +|++++.+++.|.+.++++. + .+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l----~~-g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~ 152 (336)
T 1yvv_A 78 VAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAM----RG-DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFS 152 (336)
T ss_dssp EEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHH----HT-TCCEECSCCEEEEEECSSCEEEEETTSCEEEEES
T ss_pred eeeccccceeccCcccccCCCCCccEEcCccHHHHHHHH----Hc-cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccC
Confidence 000 00011121111 12 7888888 79999998888988876554 4 489
Q ss_pred EEEEccCCC
Q 016820 165 TVIVATGAV 173 (382)
Q Consensus 165 ~lvlA~G~~ 173 (382)
+||+|+|..
T Consensus 153 ~vV~a~g~~ 161 (336)
T 1yvv_A 153 HVIIATPAP 161 (336)
T ss_dssp EEEECSCHH
T ss_pred EEEEcCCHH
Confidence 999999974
No 139
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.98 E-value=4.8e-09 Score=99.89 Aligned_cols=56 Identities=20% Similarity=0.270 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHHcCcEEEEe----eEEEEEecCCcEE-EEECCe-EEEcCEEEEccCCCC
Q 016820 119 GGDLMDRCRNQSLRFGTQIFTE----TVSKVDFKSRPFK-VFTDSK-SVLADTVIVATGAVA 174 (382)
Q Consensus 119 ~~~~~~~~~~~~~~~gi~~~~~----~v~~i~~~~~~~~-v~~~~~-~~~~d~lvlA~G~~~ 174 (382)
...+...+.+.+++.|++++.+ +|++|..+++.+. +.+.++ ++.+|.||+|+|...
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 4578888888899999999988 5999988887777 877666 799999999999964
No 140
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.98 E-value=2.4e-09 Score=102.42 Aligned_cols=121 Identities=26% Similarity=0.262 Sum_probs=82.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCC---CCCCCccee-----cCC---C-----------cccC----
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMAN---DIAPGGQLT-----TTS---D-----------VENF---- 110 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~---~~~~gg~~~-----~~~---~-----------~~~~---- 110 (382)
..+||+|||||++|+++|+.|++.|++|+|+|+.... ....|..+. ... . ...+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 84 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDM 84 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCC
Confidence 3589999999999999999999999999999974311 111222110 000 0 0000
Q ss_pred ------CCCCCCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEE---EEE--CCe--EEEcCEEEEccCCCCcC
Q 016820 111 ------PGFPQGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFK---VFT--DSK--SVLADTVIVATGAVAKK 176 (382)
Q Consensus 111 ------~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~---v~~--~~~--~~~~d~lvlA~G~~~~~ 176 (382)
+.....+...++.+.+.+.+.+.|++++.+ +|++++.+++.+. +.. ++. ++++|.||.|+|..+..
T Consensus 85 ~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 85 QTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp SCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred ceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 000012456788888999888899999988 6999987776643 333 344 69999999999997655
Q ss_pred C
Q 016820 177 L 177 (382)
Q Consensus 177 ~ 177 (382)
.
T Consensus 165 r 165 (453)
T 3atr_A 165 R 165 (453)
T ss_dssp G
T ss_pred H
Confidence 4
No 141
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.97 E-value=2.8e-09 Score=99.05 Aligned_cols=55 Identities=13% Similarity=0.096 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCC
Q 016820 120 GDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVA 174 (382)
Q Consensus 120 ~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~ 174 (382)
..+...+.+.+.+.|++++.+ +|+++..+++.+.+.++++++.+|.||+|+|.+.
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCEEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCeEEcCEEEEcCCccH
Confidence 467788888888899999988 7999998777788888777899999999999864
No 142
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.97 E-value=3.2e-09 Score=101.42 Aligned_cols=104 Identities=27% Similarity=0.211 Sum_probs=82.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|++|+++|..|++.|.+|+++|+. ..+ . ......++.+.+.+.+++.|++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~----~~~------------l----~~~~~~~~~~~l~~~l~~~gv~ 207 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDIL----DRP------------L----GVYLDKEFTDVLTEEMEANNIT 207 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS----SST------------T----TTTCCHHHHHHHHHHHHTTTEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecC----ccc------------c----cccCCHHHHHHHHHHHHhCCCE
Confidence 4689999999999999999999999999999942 000 0 0123467888899999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFP 180 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~ 180 (382)
++.+ +|.+++.+++.+.+.+++.++.+|.||+|+|.+|+.+.++
T Consensus 208 i~~~~~v~~i~~~~~v~~v~~~~~~i~~d~vi~a~G~~p~~~~~~ 252 (447)
T 1nhp_A 208 IATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPNTAWLK 252 (447)
T ss_dssp EEESCCEEEEECSSBCCEEEESSCEEECSEEEECSCEEESCGGGT
T ss_pred EEcCCEEEEEEccCcEEEEEECCCEEECCEEEECcCCCCChHHHH
Confidence 9998 6999987643334566777899999999999998765443
No 143
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.97 E-value=5.3e-09 Score=102.85 Aligned_cols=119 Identities=20% Similarity=0.250 Sum_probs=79.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCC---CCCcceecCCC---------------------------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDI---APGGQLTTTSD--------------------------- 106 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~---~~gg~~~~~~~--------------------------- 106 (382)
..+||+|||||++|+++|+.|++.|.+|+|||+...... ..++.+.....
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 568999999999999999999999999999996321110 01111110000
Q ss_pred -------------------------c---ccCCCC--C-----C--CCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEec
Q 016820 107 -------------------------V---ENFPGF--P-----Q--GILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFK 148 (382)
Q Consensus 107 -------------------------~---~~~~~~--~-----~--~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~ 148 (382)
+ ..+.+. + . ......+.+.|.+.+.+.|++++.+ +|+++..+
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 279 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN 279 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC
Confidence 0 000000 0 0 0236678888999999999999998 69998876
Q ss_pred C-Cc---EEEEE-CCe--EEEcCEEEEccCCCCc
Q 016820 149 S-RP---FKVFT-DSK--SVLADTVIVATGAVAK 175 (382)
Q Consensus 149 ~-~~---~~v~~-~~~--~~~~d~lvlA~G~~~~ 175 (382)
+ +. +.+.. ++. ++.+|.||+|+|....
T Consensus 280 ~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 280 DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 6 54 34443 343 5899999999999764
No 144
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.97 E-value=3.1e-09 Score=102.26 Aligned_cols=102 Identities=14% Similarity=0.054 Sum_probs=80.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
.+++++|||+|+.|+++|..|++.|.+|+++|+.. . -++ .....++.+.+++.+++.|++
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~----~------------~l~----~~~~~~~~~~l~~~l~~~Gv~ 236 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG----H------------VGG----VGIDMEISKNFQRILQKQGFK 236 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS----S------------SSC----SSCCHHHHHHHHHHHHHTTCE
T ss_pred cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC----c------------cCC----cccCHHHHHHHHHHHHHCCCE
Confidence 45789999999999999999999999999999410 0 001 023467888899999999999
Q ss_pred EEEe-eEEEEEecCCc-EEEEE------CCeEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRP-FKVFT------DSKSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~-~~v~~------~~~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ +|.+++.+++. +.+.. ++.++.+|.||+|+|.+|+...
T Consensus 237 i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~ 286 (474)
T 1zmd_A 237 FKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKN 286 (474)
T ss_dssp EECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTT
T ss_pred EEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCc
Confidence 9998 79999877655 65552 3456999999999999987653
No 145
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.96 E-value=1e-09 Score=100.91 Aligned_cols=110 Identities=14% Similarity=0.256 Sum_probs=72.5
Q ss_pred ccEEEECCcHHHHHHHHHHHH---cCCCeEEEecccCCCCCCCcceecCCC-----------cc----------------
Q 016820 59 TKVCIIGSGPAAHTAAIYAAR---AELKPILFEGWMANDIAPGGQLTTTSD-----------VE---------------- 108 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~---~g~~v~lie~~~~~~~~~gg~~~~~~~-----------~~---------------- 108 (382)
+||+|||||++|+++|+.|++ .|++|+|+|+ ....||.+..... ..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek----~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~ 77 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDK----ADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFY 77 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECS----SSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEEC----CCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHH
Confidence 589999999999999999999 8999999995 3344443321100 00
Q ss_pred ----------cCCCC-------C---CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCe-EEEcCEE
Q 016820 109 ----------NFPGF-------P---QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSK-SVLADTV 166 (382)
Q Consensus 109 ----------~~~~~-------~---~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~-~~~~d~l 166 (382)
.+... . .......+....+..+++.|++++.+ .|++|+.+++.|.+.++++ .+.+|+|
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~v 157 (342)
T 3qj4_A 78 DELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLI 157 (342)
T ss_dssp HHHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEE
T ss_pred HHHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEE
Confidence 00000 0 00001112223333444558999888 6999999888899887654 4899999
Q ss_pred EEccCC
Q 016820 167 IVATGA 172 (382)
Q Consensus 167 vlA~G~ 172 (382)
|+|+..
T Consensus 158 V~A~p~ 163 (342)
T 3qj4_A 158 VLTMPV 163 (342)
T ss_dssp EECSCH
T ss_pred EECCCH
Confidence 999964
No 146
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.96 E-value=3.4e-09 Score=101.74 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=80.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||||+.|+++|..|++.|.+|+++++. . . -++ ....++.+.+.+.+++.|++
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----~----~--------~l~-----~~~~~~~~~l~~~l~~~gv~ 228 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFL----P----R--------ALP-----NEDADVSKEIEKQFKKLGVT 228 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----S----S--------SST-----TSCHHHHHHHHHHHHHHTCE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcC----C----c--------ccc-----ccCHHHHHHHHHHHHHcCCE
Confidence 4579999999999999999999999999999941 0 0 011 13467888888999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEE--CC--eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFT--DS--KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~--~~--~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ ++.+++.+++.+.+.. ++ .++.+|.||+|+|.+|+...
T Consensus 229 i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 229 ILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSS
T ss_pred EEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCC
Confidence 9998 7999987765565553 34 46999999999999987653
No 147
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.95 E-value=2.7e-09 Score=102.35 Aligned_cols=100 Identities=15% Similarity=0.029 Sum_probs=80.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
...+++|||||++|+++|..|++.|.+|+++++. .. .+ .....++.+.+.+.+++.|++
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~----~~------------~l-----~~~~~~~~~~l~~~l~~~gv~ 223 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALE----DR------------LL-----FQFDPLLSATLAENMHAQGIE 223 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----SS------------SS-----TTSCHHHHHHHHHHHHHTTCE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcC----Cc------------cc-----cccCHHHHHHHHHHHHHCCCE
Confidence 3578999999999999999999999999999941 00 00 112357778888888999999
Q ss_pred EEEe-eEEEEEecCCcEEEEEC-Ce-EEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTD-SK-SVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~-~~-~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ +|.+++.+++.+.+.++ +. ++.+|.||+|+|.+|+..
T Consensus 224 i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 224 THLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred EEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 9998 69999876655666664 44 699999999999998874
No 148
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.95 E-value=1.5e-09 Score=104.03 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=78.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||||++|+++|..|++.|.+|+|+|+. ..+ .+ ...+++.+.+.+.+++.|++
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----~~~------------l~-----~~~~~~~~~l~~~l~~~gv~ 228 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEAR----ERI------------LP-----TYDSELTAPVAESLKKLGIA 228 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS----SSS------------ST-----TSCHHHHHHHHHHHHHHTCE
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcC----Ccc------------cc-----ccCHHHHHHHHHHHHHCCCE
Confidence 4578999999999999999999999999999941 000 11 13467888888888999999
Q ss_pred EEEe-eEEEEEecCCcEEEEEC-C--eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTD-S--KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~-~--~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ ++.+++. ++ +.+..+ + .++.+|.||+|+|.+|+.+.
T Consensus 229 i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 229 LHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred EEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 9998 7999987 43 656533 3 46999999999999998764
No 149
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.95 E-value=6.8e-09 Score=97.47 Aligned_cols=54 Identities=19% Similarity=0.154 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCC
Q 016820 120 GDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAV 173 (382)
Q Consensus 120 ~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~ 173 (382)
..+...+.+.+.+.|++++.+ +|+++..+++.+.+.++++++++|.||+|+|.+
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRGTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCCEEEcCEEEEcCCcC
Confidence 456677778888889999998 699998887778888877889999999999986
No 150
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.95 E-value=3.6e-09 Score=101.14 Aligned_cols=100 Identities=19% Similarity=0.159 Sum_probs=79.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||||+.|+++|..|++.|.+|+++|+. .. .++ ....++.+.+.+.+++.|++
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----~~------------~l~-----~~~~~~~~~l~~~l~~~Gv~ 224 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMF----DA------------PLP-----SFDPMISETLVEVMNAEGPQ 224 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----SS------------SST-----TSCHHHHHHHHHHHHHHSCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeC----Cc------------hhh-----hhhHHHHHHHHHHHHHCCCE
Confidence 4579999999999999999999999999999941 00 011 12357888888888999999
Q ss_pred EEEe-eEEEEEecCCc-EEEEEC-CeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRP-FKVFTD-SKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~-~~v~~~-~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ ++.+++.+++. +.+.++ +.++.+|.||+|+|.+|+..
T Consensus 225 i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 225 LHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp EECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 9998 69999876543 566654 44799999999999998875
No 151
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.95 E-value=4.3e-09 Score=101.97 Aligned_cols=99 Identities=17% Similarity=0.165 Sum_probs=79.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++++|||+|+.|+++|..|+++|.+|+++++.. . -+ ....+++.+.+.+.+++.|+++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~--------~--------~l-----~~~d~~~~~~l~~~l~~~gv~i 234 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN--------R--------IL-----RKFDESVINVLENDMKKNNINI 234 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS--------S--------SC-----TTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC--------c--------cC-----cccchhhHHHHHHHHHhCCCEE
Confidence 5799999999999999999999999999999310 0 01 1234678888899999999999
Q ss_pred EEe-eEEEEEecCC-cEEEEEC-CeE-EEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSR-PFKVFTD-SKS-VLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~-~~~v~~~-~~~-~~~d~lvlA~G~~~~~~ 177 (382)
+.+ ++.+++.+++ .+.+..+ +.+ +.+|.||+|+|.+|+..
T Consensus 235 ~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 235 VTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp ECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred EECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 999 6999987643 3556554 445 89999999999999874
No 152
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.94 E-value=5e-09 Score=97.95 Aligned_cols=56 Identities=25% Similarity=0.324 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCC
Q 016820 119 GGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVA 174 (382)
Q Consensus 119 ~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~ 174 (382)
...+...+.+.+++.|++++.+ +|+++..+++.+.+.++++++++|.||+|+|.++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCCEEEeCEEEEecCccH
Confidence 3677788888889999999988 7999998777788888888899999999999864
No 153
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.93 E-value=3.9e-09 Score=101.67 Aligned_cols=100 Identities=14% Similarity=0.129 Sum_probs=79.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||||+.|+++|..|++.|.+|+++|+. .. -+ .....++.+.+.+.+++.|++
T Consensus 182 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----~~------------~l-----~~~~~~~~~~l~~~l~~~gv~ 240 (478)
T 1v59_A 182 IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQ----PQ------------IG-----ASMDGEVAKATQKFLKKQGLD 240 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----SS------------SS-----SSSCHHHHHHHHHHHHHTTCE
T ss_pred cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeC----Cc------------cc-----cccCHHHHHHHHHHHHHCCCE
Confidence 3579999999999999999999999999999941 00 00 123467888899999999999
Q ss_pred EEEe-eEEEEEe--cCCcEEEEEC------CeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDF--KSRPFKVFTD------SKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~--~~~~~~v~~~------~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ ++.+++. +++.+.+... +.++.+|.||+|+|.+|+..
T Consensus 241 i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 241 FKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred EEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 9998 7999987 5554555432 34699999999999998875
No 154
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.93 E-value=2.3e-09 Score=103.43 Aligned_cols=100 Identities=18% Similarity=0.092 Sum_probs=79.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||||+.|+++|..|++.|.+|+|+|+.. . -+ ....+++.+.+.+.+++.||+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~----~------------~l-----~~~~~~~~~~l~~~l~~~gV~ 242 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD----G------------LM-----QGADRDLVKVWQKQNEYRFDN 242 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS----S------------SS-----TTSCHHHHHHHHHHHGGGEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC----c------------cc-----cccCHHHHHHHHHHHHhcCCE
Confidence 36799999999999999999999999999999410 0 01 123467888889999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEEC-----CeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTD-----SKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~-----~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ ++.+++.+++.+.+... +.++.+|.||+|+|.+|+..
T Consensus 243 i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 243 IMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGG
T ss_pred EEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCC
Confidence 9998 79999877665555443 45689999999999998764
No 155
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.92 E-value=5.7e-09 Score=100.27 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=79.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHH-HHcCc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQS-LRFGT 135 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gi 135 (382)
..++++|||+|+.|+++|..|++.|.+|+++++.. . -++ ...+++.+.+.+.+ ++.|+
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--------~--------~l~-----~~d~~~~~~l~~~l~~~~gv 231 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP--------R--------CAP-----TLDEDVTNALVGALAKNEKM 231 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS--------S--------SST-----TSCHHHHHHHHHHHHHHTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC--------c--------ccc-----cCCHHHHHHHHHHHhhcCCc
Confidence 45799999999999999999999999999999410 0 011 13467888888888 89999
Q ss_pred EEEEe-eEEEEEecCCcEEEEE---CC--eEEEcCEEEEccCCCCcCCC
Q 016820 136 QIFTE-TVSKVDFKSRPFKVFT---DS--KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~~~v~~---~~--~~~~~d~lvlA~G~~~~~~~ 178 (382)
+++.+ +|.+++.+++.+.+.. ++ .++.+|.||+|+|.+|+...
T Consensus 232 ~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 280 (468)
T 2qae_A 232 KFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGG 280 (468)
T ss_dssp EEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTT
T ss_pred EEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCC
Confidence 99998 7999987766565553 23 46999999999999987653
No 156
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.92 E-value=7.5e-09 Score=100.25 Aligned_cols=101 Identities=13% Similarity=0.138 Sum_probs=81.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|.+.|.+|+++++.. . .++ ...+++.+.+.+.+++.|++
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~--------~--------~l~-----~~d~~~~~~l~~~l~~~GV~ 239 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD--------H--------VLP-----YEDADAALVLEESFAERGVR 239 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS--------S--------SSC-----CSSHHHHHHHHHHHHHTTCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC--------c--------ccc-----ccCHHHHHHHHHHHHHCCCE
Confidence 45799999999999999999999999999999410 0 011 13467888899999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEEC-CeEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTD-SKSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~-~~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ .|.+++.+++.+.+.++ +.++.+|.||+|+|.+|+...
T Consensus 240 i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 240 LFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp EETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSS
T ss_pred EEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCc
Confidence 9998 79999887666777654 457999999999999988743
No 157
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.92 E-value=4.8e-09 Score=101.05 Aligned_cols=99 Identities=13% Similarity=0.100 Sum_probs=78.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||||+.|+++|..|++.|.+|+++++.. . -+ ....+++.+.+.+.+++.|++
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~----~------------~l-----~~~d~~~~~~l~~~l~~~Gv~ 242 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE----T------------VL-----RKFDECIQNTITDHYVKEGIN 242 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS----S------------SC-----TTSCHHHHHHHHHHHHHHTCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC----c------------cc-----cccCHHHHHHHHHHHHhCCeE
Confidence 45789999999999999999999999999999410 0 01 113467888888889999999
Q ss_pred EEEe-eEEEEEecCCc--EEEEECC--eEEEcCEEEEccCCCCcC
Q 016820 137 IFTE-TVSKVDFKSRP--FKVFTDS--KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~--~~v~~~~--~~~~~d~lvlA~G~~~~~ 176 (382)
++.+ +|.+++.+++. +.+..++ .++.+|.||+|+|.+|+.
T Consensus 243 i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 243 VHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred EEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 9999 69999875443 5666544 469999999999999886
No 158
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.91 E-value=1.2e-08 Score=102.61 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=48.2
Q ss_pred ChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEEC-CeEEEcCEEEEccCCCC
Q 016820 118 LGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTD-SKSVLADTVIVATGAVA 174 (382)
Q Consensus 118 ~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~-~~~~~~d~lvlA~G~~~ 174 (382)
....+...+.+.+.+.|++++.+ +|+++..+++.|.+.+. ++++.+|.||+|+|...
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 34677788888888999999998 79999988888888874 46799999999999964
No 159
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.91 E-value=1.3e-08 Score=102.47 Aligned_cols=57 Identities=16% Similarity=0.124 Sum_probs=47.3
Q ss_pred ChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCe--EEEcCEEEEccCCCC
Q 016820 118 LGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSK--SVLADTVIVATGAVA 174 (382)
Q Consensus 118 ~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~--~~~~d~lvlA~G~~~ 174 (382)
....+...+.+.+.+.|++++.+ +|+++..+++.|.+.++++ ++.+|.||+|+|...
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 34577778888888999999998 7999998888888887654 799999999999964
No 160
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.91 E-value=5.2e-09 Score=98.79 Aligned_cols=117 Identities=17% Similarity=0.180 Sum_probs=77.5
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCC-eEEEecccCCCCCCCcceecC-----------------------CCcc--c--
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELK-PILFEGWMANDIAPGGQLTTT-----------------------SDVE--N-- 109 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~-v~lie~~~~~~~~~gg~~~~~-----------------------~~~~--~-- 109 (382)
.+||+|||||++|+++|..|++.|++ |+|+|+...... .|..+... .... .
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~-~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~ 82 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP-LGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQS 82 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC-CSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc-ceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCC
Confidence 47999999999999999999999999 999997432111 11111000 0000 0
Q ss_pred ------C-----CCC--C-CCCChHHHHHHHHHHHHH-cC-cEEEEe-eEEEEEecCCcEEEEEC----C--eEEEcCEE
Q 016820 110 ------F-----PGF--P-QGILGGDLMDRCRNQSLR-FG-TQIFTE-TVSKVDFKSRPFKVFTD----S--KSVLADTV 166 (382)
Q Consensus 110 ------~-----~~~--~-~~~~~~~~~~~~~~~~~~-~g-i~~~~~-~v~~i~~~~~~~~v~~~----~--~~~~~d~l 166 (382)
. ..+ + ..+...++.+.+.+.+.+ .| ++++.+ +|++++. ++.+.+... + .++++|.|
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~v 161 (410)
T 3c96_A 83 GATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVL 161 (410)
T ss_dssp SCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEE
T ss_pred CCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEE
Confidence 0 000 0 123456788888888776 46 578888 7888887 556665542 4 46999999
Q ss_pred EEccCCCCcC
Q 016820 167 IVATGAVAKK 176 (382)
Q Consensus 167 vlA~G~~~~~ 176 (382)
|.|+|..+..
T Consensus 162 V~AdG~~S~v 171 (410)
T 3c96_A 162 VGADGIHSAV 171 (410)
T ss_dssp EECCCTTCHH
T ss_pred EECCCccchh
Confidence 9999997643
No 161
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.90 E-value=6e-09 Score=100.69 Aligned_cols=100 Identities=14% Similarity=0.047 Sum_probs=79.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|+|||+|+.|+++|..|++.|.+|+++++. .. .......++.+.+.+.+++. ++
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~----~~-----------------~l~~~d~~~~~~l~~~l~~~-V~ 230 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRS----GS-----------------VANLQDEEMKRYAEKTFNEE-FY 230 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCT----TC-----------------CTTCCCHHHHHHHHHHHHTT-SE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEEC----Cc-----------------ccccCCHHHHHHHHHHHhhC-cE
Confidence 4679999999999999999999999999999941 00 01123467888888888877 99
Q ss_pred EEEe-eEEEEEecCCcEEEEE---CC--eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFT---DS--KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~---~~--~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ .+..++.+++.+.+.. ++ .++.+|.||+|+|.+|+...
T Consensus 231 i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 231 FDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred EEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 9988 7899988777776665 34 56999999999999987764
No 162
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.90 E-value=8.9e-09 Score=99.45 Aligned_cols=100 Identities=17% Similarity=0.051 Sum_probs=80.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc---CCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA---ELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~---g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
...+++|||+|+.|+++|..|++. |.+|+++++.. . -++ ...+++.+.+.+.+++.
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~----~------------~l~-----~~d~~~~~~l~~~l~~~ 244 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD----M------------ILR-----GFDSELRKQLTEQLRAN 244 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS----S------------SST-----TSCHHHHHHHHHHHHHT
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC----C------------ccc-----ccCHHHHHHHHHHHHhC
Confidence 457999999999999999999999 99999999410 0 011 12467888889999999
Q ss_pred CcEEEEe-eEEEEEecCC-cEEEEECC-eEEEcCEEEEccCCCCcCC
Q 016820 134 GTQIFTE-TVSKVDFKSR-PFKVFTDS-KSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 134 gi~~~~~-~v~~i~~~~~-~~~v~~~~-~~~~~d~lvlA~G~~~~~~ 177 (382)
|++++.+ +|.+++.+++ .+.+.+++ .++.+|.||+|+|.+|+..
T Consensus 245 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 245 GINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp TEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred CCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCcc
Confidence 9999999 7999987653 36666644 4799999999999998864
No 163
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.90 E-value=1.4e-08 Score=98.48 Aligned_cols=54 Identities=22% Similarity=0.208 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHcCcEEEEe-eEEEEEec-CCc---EEEEECCe--EEEcC-EEEEccCCCC
Q 016820 121 DLMDRCRNQSLRFGTQIFTE-TVSKVDFK-SRP---FKVFTDSK--SVLAD-TVIVATGAVA 174 (382)
Q Consensus 121 ~~~~~~~~~~~~~gi~~~~~-~v~~i~~~-~~~---~~v~~~~~--~~~~d-~lvlA~G~~~ 174 (382)
.+.+.+.+.+++.|++++.+ +|+++..+ ++. +.+..+++ +++++ .||+|+|...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 78889999999999999988 69998876 443 33444443 48895 9999999976
No 164
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.90 E-value=9.1e-09 Score=96.22 Aligned_cols=100 Identities=12% Similarity=0.129 Sum_probs=80.8
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++++|||+|+.|+++|..|++.|.+|+++|+.. .+.......++.+.+.+.+++.|+++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~--------------------~~~~~~~~~~~~~~l~~~l~~~gv~i 204 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE--------------------QVMPGLLHPAAAKAVQAGLEGLGVRF 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS--------------------SSSTTTSCHHHHHHHHHHHHTTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc--------------------chhhcccCHHHHHHHHHHHHHcCCEE
Confidence 6799999999999999999999999999999410 00011234678888889999999999
Q ss_pred EEe-eEEEEEecCCcEEEEEC-CeEEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSRPFKVFTD-SKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~~v~~~-~~~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ +|.+++.+++.+.+..+ +.++.+|.||+|+|.+|+..
T Consensus 205 ~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 246 (384)
T 2v3a_A 205 HLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTE 246 (384)
T ss_dssp EESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCH
T ss_pred EeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHH
Confidence 999 69999887766666654 45799999999999998763
No 165
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.90 E-value=8.8e-09 Score=99.57 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=80.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|+|||||+.|+++|..|++.|.+|+++++.. . + ......++.+.+.+.+++.|++
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~----~-------------~----l~~~d~~~~~~l~~~l~~~gV~ 255 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD----T-------------I----LGGMDGEVAKQLQRMLTKQGID 255 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS----S-------------S----SSSSCHHHHHHHHHHHHHTTCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc----c-------------c----cccCCHHHHHHHHHHHHhCCCE
Confidence 46789999999999999999999999999999310 0 0 0123467888888999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEEC----C--eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTD----S--KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~----~--~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ ++.+++.+++.+.+... + .++.+|.||+|+|.+|+...
T Consensus 256 v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 256 FKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTT
T ss_pred EEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCc
Confidence 9998 69999887766555442 3 46999999999999987753
No 166
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.90 E-value=4.4e-09 Score=101.12 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=80.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|++.|.+|+++++.. . -+ ....+++.+.+.+.+++.|++
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~----~------------~l-----~~~~~~~~~~l~~~l~~~gv~ 234 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS----E------------IV-----PTMDAEIRKQFQRSLEKQGMK 234 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS----S------------SS-----TTSCHHHHHHHHHHHHHSSCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC----c------------cc-----ccccHHHHHHHHHHHHHcCCE
Confidence 45799999999999999999999999999999410 0 01 123467888899999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEE----CC--eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFT----DS--KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~----~~--~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ ++.+++.+++.+.+.. ++ .++.+|.||+|+|.+|+...
T Consensus 235 i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 235 FKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSG 283 (470)
T ss_dssp EECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTT
T ss_pred EEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCC
Confidence 9998 7999987765555543 23 56999999999999987653
No 167
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.89 E-value=1.9e-08 Score=94.46 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCc-EEEEECCeEEEcCEEEEccCCCC
Q 016820 119 GGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRP-FKVFTDSKSVLADTVIVATGAVA 174 (382)
Q Consensus 119 ~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~-~~v~~~~~~~~~d~lvlA~G~~~ 174 (382)
...+.+.+.+.+++.|++++.+ +|+++..+++. +.+.++++++.+|.||+|+|...
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRGTIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTCCEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCceEECCEEEECCchhH
Confidence 4478888888888999999987 79999877654 55777666899999999999864
No 168
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.88 E-value=8e-09 Score=100.59 Aligned_cols=98 Identities=11% Similarity=0.153 Sum_probs=79.8
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEEE
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIF 138 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~ 138 (382)
++++|||+|+.|+++|..|++.|.+|+++++.. . .+ .....++.+.+.+.+++.|++++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~----~------------~l-----~~~~~~~~~~l~~~l~~~GV~i~ 273 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE----P------------LK-----LIKDNETRAYVLDRMKEQGMEII 273 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC----T------------TT-----TCCSHHHHHHHHHHHHHTTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC----c------------cc-----ccccHHHHHHHHHHHHhCCcEEE
Confidence 799999999999999999999999999999410 0 01 11346788889999999999999
Q ss_pred Ee-eEEEEEecCCc----EEEEECCe--EEEcCEEEEccCCCCcCC
Q 016820 139 TE-TVSKVDFKSRP----FKVFTDSK--SVLADTVIVATGAVAKKL 177 (382)
Q Consensus 139 ~~-~v~~i~~~~~~----~~v~~~~~--~~~~d~lvlA~G~~~~~~ 177 (382)
.+ +|++++.+++. +.+.++++ ++.+|.||+|+|.+|+..
T Consensus 274 ~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 274 SGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp SSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred ECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 88 79999875544 66776555 799999999999998764
No 169
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.88 E-value=1.1e-08 Score=98.57 Aligned_cols=101 Identities=19% Similarity=0.195 Sum_probs=80.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|++.|.+|+++++.. . .+ .....++.+.+.+.+++.|++
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~--------~--------~l-----~~~~~~~~~~l~~~l~~~Gv~ 237 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD--------K--------FL-----PAVDEQVAKEAQKILTKQGLK 237 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS--------S--------SS-----TTSCHHHHHHHHHHHHHTTEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC--------C--------cC-----cccCHHHHHHHHHHHHhCCCE
Confidence 45789999999999999999999999999999410 0 01 123467888888999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEEC-C---eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTD-S---KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~-~---~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ .+.+++.+++.+.+... + .++.+|.||+|+|.+|+...
T Consensus 238 v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~ 284 (476)
T 3lad_A 238 ILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTD 284 (476)
T ss_dssp EEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTT
T ss_pred EEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCC
Confidence 9998 79999887766655442 2 46999999999999987753
No 170
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.87 E-value=1.7e-08 Score=98.81 Aligned_cols=118 Identities=16% Similarity=0.134 Sum_probs=77.9
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcc--------------------------------eec
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQ--------------------------------LTT 103 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~--------------------------------~~~ 103 (382)
+..+||+|||||++|+++|..|++.|++|+|||+.........+. ...
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 103 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWV 103 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEe
Confidence 346899999999999999999999999999999743221111000 000
Q ss_pred C---C-Cc--ccCCC---------CC---CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEEC----C--
Q 016820 104 T---S-DV--ENFPG---------FP---QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTD----S-- 158 (382)
Q Consensus 104 ~---~-~~--~~~~~---------~~---~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~----~-- 158 (382)
. . .. ..++. .+ ..+....+.+.+.+.+.+. ++.+ +|++++.+++.+++... +
T Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~ 180 (549)
T 2r0c_A 104 TRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGAT 180 (549)
T ss_dssp SSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCE
T ss_pred ccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCE
Confidence 0 0 00 00000 00 1234567778888888776 6666 79999888777766542 3
Q ss_pred eEEEcCEEEEccCCCCcC
Q 016820 159 KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 159 ~~~~~d~lvlA~G~~~~~ 176 (382)
.++++|+||.|+|.++..
T Consensus 181 ~~i~a~~vVgADG~~S~v 198 (549)
T 2r0c_A 181 RAVHARYLVACDGASSPT 198 (549)
T ss_dssp EEEEEEEEEECCCTTCHH
T ss_pred EEEEeCEEEECCCCCcHH
Confidence 369999999999997643
No 171
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.87 E-value=1.3e-08 Score=98.28 Aligned_cols=101 Identities=23% Similarity=0.191 Sum_probs=80.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|+|||+|+.|+++|..|++.|.+|+++++.. .+.......++.+.+.+.+++.||+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~--------------------~~l~~~~~~~~~~~l~~~l~~~GV~ 252 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD--------------------TCLAGYYDRDLTDLMAKNMEEHGIQ 252 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS--------------------STTTTTSCHHHHHHHHHHHHTTTCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc--------------------chhhhHHHHHHHHHHHHHHHhCCeE
Confidence 46789999999999999999999999999999410 0001123467888899999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ ++.+++.+++...+.+++.++.+|.||+|+|.+|+.+
T Consensus 253 i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 253 LAFGETVKEVAGNGKVEKIITDKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EEETCCEEEEECSSSCCEEEESSCEEECSEEEECCCEEECCG
T ss_pred EEeCCEEEEEEcCCcEEEEEECCcEEECCEEEECCCCCcChH
Confidence 9998 6999986433223555777899999999999998765
No 172
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.87 E-value=1.1e-08 Score=99.02 Aligned_cols=100 Identities=18% Similarity=0.128 Sum_probs=79.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc---CCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA---ELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~---g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
...+++|||+|+.|+++|..|+++ |.+|+++++.. . .+ ....+++.+.+.+.+++.
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~--------~--------~l-----~~~d~~~~~~l~~~l~~~ 248 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN--------L--------IL-----RGFDETIREEVTKQLTAN 248 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS--------S--------SC-----TTSCHHHHHHHHHHHHHT
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC--------c--------cc-----cccCHHHHHHHHHHHHhC
Confidence 457999999999999999999999 99999999410 0 01 113467888888999999
Q ss_pred CcEEEEe-eEEEEEecCC-cEEEEEC-CeEEEcCEEEEccCCCCcCC
Q 016820 134 GTQIFTE-TVSKVDFKSR-PFKVFTD-SKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 134 gi~~~~~-~v~~i~~~~~-~~~v~~~-~~~~~~d~lvlA~G~~~~~~ 177 (382)
||+++.+ +|.+++.+++ .+.+.+. +.++.+|.||+|+|.+|+..
T Consensus 249 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 249 GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 9999999 7999987653 3556554 44799999999999998764
No 173
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.86 E-value=1.3e-08 Score=98.00 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=79.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|+++|.+|+++++.. . .......++.+.+.+.+++.|++
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--------------------~-~l~~~d~~~~~~~~~~l~~~gv~ 244 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD--------------------K-VLRSFDSMISTNCTEELENAGVE 244 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS--------------------S-SCTTSCHHHHHHHHHHHHHTTCE
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC--------------------c-cccccCHHHHHHHHHHHHHCCCE
Confidence 45789999999999999999999999999999310 0 01123467888888999999999
Q ss_pred EEEe-eEEEEEecCCc--EEEEECC--------eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRP--FKVFTDS--------KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~--~~v~~~~--------~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ .+.+++.+++. +.+...+ .++.+|.||+|+|.+|+...
T Consensus 245 i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~ 297 (478)
T 3dk9_A 245 VLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKD 297 (478)
T ss_dssp EETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTT
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCC
Confidence 9998 68899876544 5555432 56899999999999987753
No 174
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.86 E-value=1.9e-08 Score=96.99 Aligned_cols=101 Identities=24% Similarity=0.261 Sum_probs=82.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|++.|.+|+++++.. .+ + .....++.+.+.+.+++.|++
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~--------~~--------l-----~~~~~~~~~~l~~~l~~~Gv~ 248 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD--------LI--------L-----RNFDYDLRQLLNDAMVAKGIS 248 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS--------SS--------S-----TTSCHHHHHHHHHHHHHHTCE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC--------cc--------c-----cccCHHHHHHHHHHHHHCCCE
Confidence 46799999999999999999999999999999410 00 1 112467888888888999999
Q ss_pred EEEe-eEEEEEecCCcEEEEECC-eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTDS-KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~~-~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ .|.+++.+++.+.+.+++ .++.+|.||+|+|.+|+...
T Consensus 249 i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 249 IIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp EESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred EEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCC
Confidence 9997 799998887777777654 47999999999999987654
No 175
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.86 E-value=1.9e-08 Score=91.29 Aligned_cols=115 Identities=19% Similarity=0.244 Sum_probs=73.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecC-CCcc---------------cCC-----CC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTT-SDVE---------------NFP-----GF 113 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~-~~~~---------------~~~-----~~ 113 (382)
..+||+|||||++|+++|+.|++. |++|+|||+.. .+|+..... .... ..+ .+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~----~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~ 153 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV----APGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDY 153 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS----SCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSE
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC----ccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCe
Confidence 468999999999999999999998 99999999632 222211100 0000 000 01
Q ss_pred CCCCChHHHHHHHHHHHHH-cCcEEEEe-eEEEEEecC-----------------C--c---EEEEE-------------
Q 016820 114 PQGILGGDLMDRCRNQSLR-FGTQIFTE-TVSKVDFKS-----------------R--P---FKVFT------------- 156 (382)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~-~gi~~~~~-~v~~i~~~~-----------------~--~---~~v~~------------- 156 (382)
.......++.+.+.+.+.+ .+++++.+ .+.++..++ + . +.+..
T Consensus 154 ~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~ 233 (344)
T 3jsk_A 154 VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAM 233 (344)
T ss_dssp EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCC
T ss_pred EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCccccc
Confidence 0111245667777777777 59999988 577775544 1 1 11110
Q ss_pred CCeEEEcCEEEEccCCCCc
Q 016820 157 DSKSVLADTVIVATGAVAK 175 (382)
Q Consensus 157 ~~~~~~~d~lvlA~G~~~~ 175 (382)
+..++++++||+|||....
T Consensus 234 d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 234 DPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp BCEEEECSEEEECCCSSSS
T ss_pred CceEEEcCEEEECCCCCch
Confidence 1246999999999998653
No 176
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.84 E-value=3.2e-08 Score=97.34 Aligned_cols=115 Identities=30% Similarity=0.363 Sum_probs=77.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcc-------eecCCC-c---------------------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQ-------LTTTSD-V--------------------- 107 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~-------~~~~~~-~--------------------- 107 (382)
..+||+|||+|++|+++|..|++.|++|+|+|+.. ..|+. +..... .
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~----~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g 200 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEP----IPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGG 200 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSS----SSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC----CCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhc
Confidence 45799999999999999999999999999999632 22221 100000 0
Q ss_pred ---------------------------ccC------CCC--CC-----C--CChHHHHHHHHHHHHHcCcEEEEe-eEEE
Q 016820 108 ---------------------------ENF------PGF--PQ-----G--ILGGDLMDRCRNQSLRFGTQIFTE-TVSK 144 (382)
Q Consensus 108 ---------------------------~~~------~~~--~~-----~--~~~~~~~~~~~~~~~~~gi~~~~~-~v~~ 144 (382)
..+ .+. +. . .....+...|.+.+++.|++++.+ +|++
T Consensus 201 ~~~~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~ 280 (572)
T 1d4d_A 201 RNINDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVR 280 (572)
T ss_dssp TTCSCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEE
T ss_pred CCCCCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEE
Confidence 000 000 00 0 125678888999999999999988 6888
Q ss_pred EEecC-Cc---EEEEE-CCe--EEEcCEEEEccCCCCc
Q 016820 145 VDFKS-RP---FKVFT-DSK--SVLADTVIVATGAVAK 175 (382)
Q Consensus 145 i~~~~-~~---~~v~~-~~~--~~~~d~lvlA~G~~~~ 175 (382)
+..++ +. +.+.. ++. ++.+|.||+|+|..+.
T Consensus 281 l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 281 ILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp EEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred EEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 87655 43 34443 343 5899999999999764
No 177
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.84 E-value=1.6e-08 Score=96.64 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=80.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|++.|.+|+++++.. .+.......++.+.+.+.+++.|++
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--------------------~~l~~~~~~~~~~~l~~~l~~~Gv~ 207 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE--------------------RVLYKYFDKEFTDILAKDYEAHGVN 207 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS--------------------STTTTTSCHHHHHHHHHHHHHTTCE
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC--------------------chhhhhhhhhHHHHHHHHHHHCCCE
Confidence 45789999999999999999999999999999410 0001123467888899999999999
Q ss_pred EEEe-eEEEEEecCCcEE-EEECCeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPFK-VFTDSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~-v~~~~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ +|.+++.+++.+. +..++.++.+|.||+|+|.+|+..
T Consensus 208 i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 208 LVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCG
T ss_pred EEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHH
Confidence 9999 7999987555453 555677899999999999998765
No 178
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.83 E-value=5.1e-09 Score=98.64 Aligned_cols=56 Identities=20% Similarity=0.319 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEEe-eEE---------EEEecCCcEEEEECCeEEEcCEEEEccCCCC
Q 016820 119 GGDLMDRCRNQSLRFGTQIFTE-TVS---------KVDFKSRPFKVFTDSKSVLADTVIVATGAVA 174 (382)
Q Consensus 119 ~~~~~~~~~~~~~~~gi~~~~~-~v~---------~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~ 174 (382)
...+...+.+.+.+.|++++.+ +|+ ++..+++.+.+.++++++++|.||+|+|.++
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCcEEECCEEEECCCccH
Confidence 3557788888888899999887 688 7776666676766777899999999999864
No 179
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.83 E-value=1.3e-08 Score=97.96 Aligned_cols=100 Identities=23% Similarity=0.160 Sum_probs=80.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|+|||+|++|+++|..|++.|.+|+++++.. .+ . .....++.+.+.+.+++.|++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~----~~------------l-----~~~~~~~~~~l~~~l~~~Gv~ 243 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND----HI------------G-----TIYDGDMAEYIYKEADKHHIE 243 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG----GT------------T-----SSSCHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC----ch------------h-----hcCCHHHHHHHHHHHHHcCcE
Confidence 46899999999999999999999999999999420 00 0 112467888889999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ ++.+++.+++...+.++++++.+|.||+|+|.+|+..
T Consensus 244 i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 244 ILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EECSCCEEEEEESSBEEEEEETTEEEECSEEEECSCEEESCG
T ss_pred EEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEECcCCCcChH
Confidence 9988 6999987643334666777899999999999998764
No 180
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.82 E-value=4e-08 Score=95.15 Aligned_cols=57 Identities=19% Similarity=0.149 Sum_probs=45.2
Q ss_pred ChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEE----CCe--EEEcCEEEEccCCCC
Q 016820 118 LGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFT----DSK--SVLADTVIVATGAVA 174 (382)
Q Consensus 118 ~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~----~~~--~~~~d~lvlA~G~~~ 174 (382)
.+..+...+.+.+.+.|++++.+ +|+++..+++.+.+.+ ++. ++++|.||+|+|.+.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 35667888888888999999987 7999988776566655 343 699999999999864
No 181
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.81 E-value=1.9e-08 Score=96.47 Aligned_cols=101 Identities=18% Similarity=0.145 Sum_probs=81.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..+++.|.+|+++++.. . .+ .....++.+.+.+.+++.|++
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~--------~--------~l-----~~~~~~~~~~l~~~l~~~Gv~ 227 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK--------E--------IL-----SRFDQDMRRGLHAAMEEKGIR 227 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS--------S--------SS-----TTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC--------c--------cc-----cccCHHHHHHHHHHHHHCCCE
Confidence 46789999999999999999999999999999410 0 01 123467888899999999999
Q ss_pred EEEe-eEEEEEecCCc-EEEE-ECCeEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRP-FKVF-TDSKSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~-~~v~-~~~~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ .|.+++.+++. +.+. ++++++.+|.||+|+|.+|+...
T Consensus 228 i~~~~~v~~i~~~~~~~~~v~~~~~g~i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 228 ILCEDIIQSVSADADGRRVATTMKHGEIVADQVMLALGRMPNTNG 272 (463)
T ss_dssp EECSCCEEEEEECTTSCEEEEESSSCEEEESEEEECSCEEESCTT
T ss_pred EECCCEEEEEEEcCCCEEEEEEcCCCeEEeCEEEEeeCcccCCCC
Confidence 9998 69999876544 5666 65555999999999999987654
No 182
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.81 E-value=5.6e-08 Score=94.72 Aligned_cols=59 Identities=15% Similarity=0.149 Sum_probs=46.4
Q ss_pred ChHHHHHHHHHHHHH-cCcEEEEeeEEEEEecCCc--EEEEEC-CeEEEcCEEEEccCCCCcC
Q 016820 118 LGGDLMDRCRNQSLR-FGTQIFTETVSKVDFKSRP--FKVFTD-SKSVLADTVIVATGAVAKK 176 (382)
Q Consensus 118 ~~~~~~~~~~~~~~~-~gi~~~~~~v~~i~~~~~~--~~v~~~-~~~~~~d~lvlA~G~~~~~ 176 (382)
....+.+.+.+.+.+ .|++++.++|++++.+++. +.+.+. ++++++|+||.|+|.++..
T Consensus 173 ~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 173 NAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp CHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred cHHHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 456778888888888 8999999999999876443 345553 3579999999999997755
No 183
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.80 E-value=2.9e-08 Score=97.00 Aligned_cols=58 Identities=17% Similarity=0.178 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEEeeEEEEEecCCc--EEEEECCe-EEEcCEEEEccCCCCcC
Q 016820 119 GGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRP--FKVFTDSK-SVLADTVIVATGAVAKK 176 (382)
Q Consensus 119 ~~~~~~~~~~~~~~~gi~~~~~~v~~i~~~~~~--~~v~~~~~-~~~~d~lvlA~G~~~~~ 176 (382)
...+...+.+.+.+.|++++.++|++++.+++. +.+.++++ ++.+|.||.|+|.++..
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 366778888888889999998899999875443 45665544 79999999999997655
No 184
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.80 E-value=1.9e-08 Score=97.16 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=77.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
.+.+++|||+|+.|+++|..|++.|.+|+++++. . .+ .....++.+.+.+.+++.||+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~---------~--------~l-----~~~d~~~~~~l~~~l~~~gv~ 241 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS---------I--------PL-----RGFDQQMSSLVTEHMESHGTQ 241 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS---------C--------SS-----TTSCHHHHHHHHHHHHHTTCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC---------c--------cc-----ccCCHHHHHHHHHHHHHCCCE
Confidence 4578999999999999999999999999999931 0 01 112467888899999999999
Q ss_pred EEEe-eEEEEEec-CCcEEEEE-C---Ce--EEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFK-SRPFKVFT-D---SK--SVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~-~~~~~v~~-~---~~--~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ .+..+... ++.+.+.. + +. ++.+|.||+|+|.+|+...
T Consensus 242 ~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 242 FLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRT 291 (488)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGG
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCc
Confidence 9998 68888764 33344433 1 33 3789999999999987653
No 185
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.80 E-value=2.4e-08 Score=97.16 Aligned_cols=100 Identities=17% Similarity=0.144 Sum_probs=75.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
.+.+++|||+|+.|+++|..|+++|.+|+++++. . .+ .....++.+.+.+.+++.||+
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~---------~--------~l-----~~~d~~~~~~~~~~l~~~GV~ 266 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS---------I--------LL-----RGFDQDMANKIGEHMEEHGIK 266 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS---------C--------SS-----TTSCHHHHHHHHHHHHHTTCE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc---------c--------cc-----ccCCHHHHHHHHHHHHHCCCE
Confidence 4568999999999999999999999999999930 0 01 112467888888999999999
Q ss_pred EEEe-eEEEEEecC----CcEEEE--E-CC---eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKS----RPFKVF--T-DS---KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~----~~~~v~--~-~~---~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ .+..+...+ +.+.+. . ++ .++.+|.||+|+|.+|+...
T Consensus 267 v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 267 FIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp EEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSS
T ss_pred EEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCC
Confidence 9988 566665432 333332 2 33 24789999999999987654
No 186
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.79 E-value=4.7e-08 Score=92.34 Aligned_cols=100 Identities=21% Similarity=0.236 Sum_probs=80.4
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++++|||+|+.|+++|..|++.|.+|+++++. +.+.......++.+.+.+.+++.|+++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~--------------------~~~l~~~~~~~~~~~l~~~l~~~GV~i 211 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEAL--------------------PRVLARVAGEALSEFYQAEHRAHGVDL 211 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS--------------------SSTTTTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecC--------------------CchhhhhcCHHHHHHHHHHHHhCCCEE
Confidence 578999999999999999999999999999941 001112235788889999999999999
Q ss_pred EEe-eEEEEEecCCcE-EEEE-CCeEEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSRPF-KVFT-DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~-~v~~-~~~~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ .|.+++.+++.+ .+.+ ++.++.+|.||+|+|.+|+..
T Consensus 212 ~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~ 254 (415)
T 3lxd_A 212 RTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVG 254 (415)
T ss_dssp EETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCH
T ss_pred EECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChH
Confidence 998 699998776554 4555 455799999999999998763
No 187
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.79 E-value=1.2e-08 Score=94.73 Aligned_cols=94 Identities=21% Similarity=0.201 Sum_probs=74.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++++|||+|++|+++|..|++.|.+|+++++.. .+ .+ ..+++.+.+.+.+++.|+++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-----------------~~--l~---~~~~~~~~l~~~l~~~gV~i 200 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-----------------MF--LG---LDEELSNMIKDMLEETGVKF 200 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-----------------CC--TT---CCHHHHHHHHHHHHHTTEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-----------------ee--cc---CCHHHHHHHHHHHHHCCCEE
Confidence 3789999999999999999999999999999410 00 01 34678888999999999999
Q ss_pred EEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ ++.+++ .+. +..+++++.+|.||+|+|.+|+..
T Consensus 201 ~~~~~v~~i~--~~~--v~~~~g~i~~D~vi~a~G~~p~~~ 237 (367)
T 1xhc_A 201 FLNSELLEAN--EEG--VLTNSGFIEGKVKICAIGIVPNVD 237 (367)
T ss_dssp ECSCCEEEEC--SSE--EEETTEEEECSCEEEECCEEECCH
T ss_pred EcCCEEEEEE--eeE--EEECCCEEEcCEEEECcCCCcCHH
Confidence 998 688887 233 333444499999999999998763
No 188
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.79 E-value=1.5e-08 Score=97.62 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=77.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
.+.+++|||+|+.|+++|..|++.|.+|+++++. . .++ ....++.+.+.+.+++.|++
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~---------~--------~l~-----~~d~~~~~~l~~~l~~~Gv~ 243 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS---------I--------VLR-----GFDQQMAELVAASMEERGIP 243 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS---------C--------SST-----TSCHHHHHHHHHHHHHTTCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC---------C--------CCc-----ccCHHHHHHHHHHHHhCCCE
Confidence 4578999999999999999999999999999931 0 011 12467888889999999999
Q ss_pred EEEe-eEEEEEecCC-cEEEEE-CC-----eEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSR-PFKVFT-DS-----KSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~-~~~v~~-~~-----~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ .+.+++.+++ .+.+.. ++ .++.+|.||+|+|.+|+..
T Consensus 244 i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 244 FLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred EEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 9998 6888987543 344433 21 2689999999999998764
No 189
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.78 E-value=5.1e-08 Score=95.59 Aligned_cols=57 Identities=14% Similarity=0.165 Sum_probs=43.2
Q ss_pred ChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcE-EEEEC----C--eEEEcCEEEEccCCCC
Q 016820 118 LGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPF-KVFTD----S--KSVLADTVIVATGAVA 174 (382)
Q Consensus 118 ~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~-~v~~~----~--~~~~~d~lvlA~G~~~ 174 (382)
....+...+.+.+.+.|++++.+ +|+++..+++.+ .+... + ..++++.||+|+|.+.
T Consensus 168 d~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 34567777888888999999997 799998877653 24332 2 4699999999999864
No 190
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.78 E-value=5.1e-08 Score=92.26 Aligned_cols=51 Identities=25% Similarity=0.246 Sum_probs=41.0
Q ss_pred HHHHHHHHHHcCcEEEEe-eEEEEEecCCcEE-EEECCeEEEcCEEEEccCCC
Q 016820 123 MDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFK-VFTDSKSVLADTVIVATGAV 173 (382)
Q Consensus 123 ~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~-v~~~~~~~~~d~lvlA~G~~ 173 (382)
.+.+.+.+.+.|++++.+ .|++|..+++.+. +.++++++.+|.||+|+|..
T Consensus 199 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g~~~~ad~VV~a~~~~ 251 (425)
T 3ka7_A 199 IDALETVISANGGKIHTGQEVSKILIENGKAAGIIADDRIHDADLVISNLGHA 251 (425)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECSCHH
T ss_pred HHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEECCEEEECCEEEECCCHH
Confidence 344455566779999988 6999998887775 77788889999999999984
No 191
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.77 E-value=2.6e-08 Score=94.23 Aligned_cols=48 Identities=15% Similarity=0.195 Sum_probs=39.1
Q ss_pred HHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCC
Q 016820 125 RCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAV 173 (382)
Q Consensus 125 ~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~ 173 (382)
.+.+.+++.|++++.+ .|++|+.+++.+ +.++++++.+|.||+|+|..
T Consensus 194 ~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 194 ELERIIMENKGKILTRKEVVEINIEEKKV-YTRDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp HHHHHHHTTTCEEESSCCEEEEETTTTEE-EETTCCEEECSEEEECSCHH
T ss_pred HHHHHHHHCCCEEEcCCeEEEEEEECCEE-EEeCCcEEEeCEEEECCCHH
Confidence 3444455678999998 699999888888 77777889999999999974
No 192
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.76 E-value=4.9e-08 Score=88.15 Aligned_cols=115 Identities=21% Similarity=0.319 Sum_probs=72.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCc-ceecC---------CCcccC---CCCC-------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGG-QLTTT---------SDVENF---PGFP------- 114 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg-~~~~~---------~~~~~~---~~~~------- 114 (382)
..+||+|||||++|+++|+.|++. |++|+|+|+. ...|+ .+... .....+ .+.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~----~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~ 139 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS----VAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDY 139 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS----SSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSE
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecC----ccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCe
Confidence 456999999999999999999999 9999999953 23332 11000 000000 0000
Q ss_pred -CCCChHHHHHHHHHHHHHc-CcEEEEe-eEEEEEecC----C--cEE-EEE---------------CCeEEEc------
Q 016820 115 -QGILGGDLMDRCRNQSLRF-GTQIFTE-TVSKVDFKS----R--PFK-VFT---------------DSKSVLA------ 163 (382)
Q Consensus 115 -~~~~~~~~~~~~~~~~~~~-gi~~~~~-~v~~i~~~~----~--~~~-v~~---------------~~~~~~~------ 163 (382)
......++...+.+.+.+. |++++.+ +|.++..+. + .+. +.. +..++.+
T Consensus 140 ~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~ 219 (326)
T 2gjc_A 140 VVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKND 219 (326)
T ss_dssp EEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSS
T ss_pred EEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccc
Confidence 0113466777787777775 9999877 688886652 2 221 211 2345889
Q ss_pred ---------CEEEEccCCCCc
Q 016820 164 ---------DTVIVATGAVAK 175 (382)
Q Consensus 164 ---------d~lvlA~G~~~~ 175 (382)
+.||.|||....
T Consensus 220 ~~~~~~~~~~~VV~ATG~~~~ 240 (326)
T 2gjc_A 220 GTRDLSQKHGVILSTTGHDGP 240 (326)
T ss_dssp SCCCSSTTCCEEEECCCCC--
T ss_pred ccccccccCCEEEECcCCCch
Confidence 999999998653
No 193
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.75 E-value=4.9e-08 Score=94.82 Aligned_cols=60 Identities=15% Similarity=0.139 Sum_probs=47.7
Q ss_pred CChHHHHHHHHHHHHHcCcEEEEeeEEEEEecCCc--EEEEECCe-EEEcCEEEEccCCCCcC
Q 016820 117 ILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRP--FKVFTDSK-SVLADTVIVATGAVAKK 176 (382)
Q Consensus 117 ~~~~~~~~~~~~~~~~~gi~~~~~~v~~i~~~~~~--~~v~~~~~-~~~~d~lvlA~G~~~~~ 176 (382)
+....+.+.+.+.+.+.|++++.++|+++..+++. +.+.++++ ++++|.||.|+|.++..
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 35678888898888889999998899999875443 55665544 79999999999997655
No 194
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.75 E-value=5.8e-08 Score=91.50 Aligned_cols=96 Identities=22% Similarity=0.222 Sum_probs=76.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++|+|||+|+.|+++|..|++.|.+|+++++.. .........++.+.+.+.+++.|+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--------------------~~l~~~~~~~~~~~l~~~l~~~GV~i 204 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQP--------------------RLMSRAAPATLADFVARYHAAQGVDL 204 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS--------------------SSSTTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC--------------------cccccccCHHHHHHHHHHHHHcCcEE
Confidence 5789999999999999999999999999999410 00011234678888889999999999
Q ss_pred EEe-eEEEEEecCCcEEEEE-CCeEEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ ++.+++ + + .+.. ++.++.+|.||+|+|.+|+..
T Consensus 205 ~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~~p~~~ 242 (408)
T 2gqw_A 205 RFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGVLANDA 242 (408)
T ss_dssp EESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCEEECCH
T ss_pred EeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCCCccHH
Confidence 999 799998 3 3 3333 456799999999999998753
No 195
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.73 E-value=2.3e-08 Score=94.26 Aligned_cols=100 Identities=21% Similarity=0.246 Sum_probs=78.7
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++++|||+|+.|+++|..|++.|.+|+++++. . .+.......++.+.+.+.+++.|+++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~----~----------------~~l~~~~~~~~~~~l~~~l~~~GV~i 202 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAG----D----------------ELLVRVLGRRIGAWLRGLLTELGVQV 202 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----S----------------SSSHHHHCHHHHHHHHHHHHHHTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecC----C----------------ccchhhcCHHHHHHHHHHHHHCCCEE
Confidence 578999999999999999999999999999931 0 00000123577888888899999999
Q ss_pred EEe-eEEEEEecCCcEEEEE-CCeEEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ .+.+++.+++...+.+ ++.++.+|.||+|+|.+|+..
T Consensus 203 ~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~ 244 (410)
T 3ef6_A 203 ELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQ 244 (410)
T ss_dssp ECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCH
T ss_pred EeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHH
Confidence 988 6999987665445555 456799999999999998753
No 196
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.73 E-value=6.6e-08 Score=90.97 Aligned_cols=99 Identities=17% Similarity=0.222 Sum_probs=79.4
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++++|||+|+.|+++|..|.+.|.+|+++++. +.+.......++.+.+.+.+++.|+++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~--------------------~~~~~~~~~~~~~~~l~~~l~~~GV~i 201 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELA--------------------PRVMARVVTPEISSYFHDRHSGAGIRM 201 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS--------------------SSTTTTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC--------------------CcchhhccCHHHHHHHHHHHHhCCcEE
Confidence 578999999999999999999999999999941 001112234678889999999999999
Q ss_pred EEe-eEEEEEecCCcE-EEEE-CCeEEEcCEEEEccCCCCcC
Q 016820 138 FTE-TVSKVDFKSRPF-KVFT-DSKSVLADTVIVATGAVAKK 176 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~-~v~~-~~~~~~~d~lvlA~G~~~~~ 176 (382)
+.+ .|.+++.+++.+ .+.+ ++.++.+|.||+|+|.+|+.
T Consensus 202 ~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 202 HYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp ECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred EECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCH
Confidence 998 799998776544 3555 44579999999999998876
No 197
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.72 E-value=7.4e-08 Score=91.42 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=78.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++|+|||+|+.|+++|..|++.|.+|+++++.. .........++.+.+.+.+++.|+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~--------------------~~l~~~~~~~~~~~l~~~l~~~GV~i 208 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA--------------------RVLERVTAPPVSAFYEHLHREAGVDI 208 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS--------------------STTTTTSCHHHHHHHHHHHHHHTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC--------------------ccccchhhHHHHHHHHHHHHhCCeEE
Confidence 5789999999999999999999999999999410 00011234678888888889999999
Q ss_pred EEe-eEEEEEe--cCCcE-EEEE-CCeEEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDF--KSRPF-KVFT-DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~--~~~~~-~v~~-~~~~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ .+.+++. +++.+ .+.. ++.++.+|.||+|+|.+|+..
T Consensus 209 ~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~ 253 (431)
T 1q1r_A 209 RTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCE 253 (431)
T ss_dssp ECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCH
T ss_pred EeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcc
Confidence 998 7999986 44444 4555 455799999999999988753
No 198
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.70 E-value=9e-08 Score=91.97 Aligned_cols=100 Identities=19% Similarity=0.196 Sum_probs=80.3
Q ss_pred cccEEEECCcHHHHHHHHHHHHc-CCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARA-ELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~-g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
.++++|||+|+.|+++|..|++. |.+|+++++.. .+.......++.+.+.+.+++.|++
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~--------------------~~l~~~~~~~~~~~l~~~l~~~GV~ 218 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD--------------------QIMPGFTSKSLSQMLRHDLEKNDVV 218 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS--------------------SSSTTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC--------------------cccccccCHHHHHHHHHHHHhcCCE
Confidence 57899999999999999999999 99999999410 0001123467888899999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEE-CCeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ +|.+++.+++.+.+.. ++.++.+|.||+|+|.+|+..
T Consensus 219 i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 261 (472)
T 3iwa_A 219 VHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQ 261 (472)
T ss_dssp EECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCH
T ss_pred EEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHH
Confidence 9998 7999988666665544 556799999999999988753
No 199
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.70 E-value=6.3e-08 Score=96.51 Aligned_cols=120 Identities=19% Similarity=0.198 Sum_probs=80.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHH-cCCCeEEEecccCCCCCCCc-c-----------------------------eecC-
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAAR-AELKPILFEGWMANDIAPGG-Q-----------------------------LTTT- 104 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~-~g~~v~lie~~~~~~~~~gg-~-----------------------------~~~~- 104 (382)
..+||+|||||++|+++|..|++ .|++|+|||+.........+ . +...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 35899999999999999999999 99999999974322111000 0 0000
Q ss_pred ----CCcc---cCC----C---CC-CCCChHHHHHHHHHHHHHcCc--EEEEe-eEEEEEecCC----cEEEEE------
Q 016820 105 ----SDVE---NFP----G---FP-QGILGGDLMDRCRNQSLRFGT--QIFTE-TVSKVDFKSR----PFKVFT------ 156 (382)
Q Consensus 105 ----~~~~---~~~----~---~~-~~~~~~~~~~~~~~~~~~~gi--~~~~~-~v~~i~~~~~----~~~v~~------ 156 (382)
.... .++ . .+ ..+....+.+.|.+.+.+.|+ +++.+ +|+++..+++ .+.+..
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 0000 000 0 00 124567888899999999976 88887 6889887652 455543
Q ss_pred -CC--eEEEcCEEEEccCCCCcC
Q 016820 157 -DS--KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 157 -~~--~~~~~d~lvlA~G~~~~~ 176 (382)
++ .++++|+||.|+|.++..
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~v 213 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNV 213 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHH
T ss_pred CCCCeEEEEeCEEEECCCcchHH
Confidence 23 469999999999997643
No 200
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.70 E-value=1.5e-07 Score=92.11 Aligned_cols=60 Identities=17% Similarity=0.064 Sum_probs=47.1
Q ss_pred CChHHHHHHHHHHHHHc-CcEEEEeeEEEEEecCCc--EEEEECC-eEEEcCEEEEccCCCCcC
Q 016820 117 ILGGDLMDRCRNQSLRF-GTQIFTETVSKVDFKSRP--FKVFTDS-KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 117 ~~~~~~~~~~~~~~~~~-gi~~~~~~v~~i~~~~~~--~~v~~~~-~~~~~d~lvlA~G~~~~~ 176 (382)
+....+.+.+.+.+.+. |++++.++|++++.+++. +.+.+.+ .++.+|.||.|+|.++..
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 34567888899988888 999998899999875443 4566544 469999999999997655
No 201
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.70 E-value=4.7e-08 Score=91.88 Aligned_cols=115 Identities=23% Similarity=0.265 Sum_probs=69.4
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCC-CCcceecCC--------------------------CcccC-
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIA-PGGQLTTTS--------------------------DVENF- 110 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~-~gg~~~~~~--------------------------~~~~~- 110 (382)
++|+|||||++|+++|..|++.|++|+|+|+....... .|..+.... ....+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 57999999999999999999999999999975332222 232211000 00000
Q ss_pred C----------CC-C----------CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecC-CcEEEEE-CCeEEEcCEE
Q 016820 111 P----------GF-P----------QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKS-RPFKVFT-DSKSVLADTV 166 (382)
Q Consensus 111 ~----------~~-~----------~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~-~~~~v~~-~~~~~~~d~l 166 (382)
. .. + ..+...++.+.+. +..+.++..+ ++++++..+ +.+++.. ++.++++|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~---~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlv 158 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILN---KGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVL 158 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHH---TTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHH---hhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEE
Confidence 0 00 0 0011223333332 2334456667 688887644 4577766 4556999999
Q ss_pred EEccCCCCcC
Q 016820 167 IVATGAVAKK 176 (382)
Q Consensus 167 vlA~G~~~~~ 176 (382)
|-|.|.++..
T Consensus 159 VgADG~~S~v 168 (412)
T 4hb9_A 159 VGADGSNSKV 168 (412)
T ss_dssp EECCCTTCHH
T ss_pred EECCCCCcch
Confidence 9999997643
No 202
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.67 E-value=1.3e-07 Score=90.24 Aligned_cols=99 Identities=20% Similarity=0.134 Sum_probs=78.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++++|||+|+.|+++|..|++.|.+|+++++.. .+......+++.+.+.+.+++. +++
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--------------------~~l~~~~~~~~~~~l~~~l~~~-v~i 206 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE--------------------RVLRRSFDKEVTDILEEKLKKH-VNL 206 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS--------------------STTTTTSCHHHHHHHHHHHTTT-SEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC--------------------ccchhhcCHHHHHHHHHHHHhC-cEE
Confidence 4689999999999999999999999999999410 0001113467888888888888 999
Q ss_pred EEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ .+.+++.+++...+..++.++.+|.||+|+|.+|+..
T Consensus 207 ~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~~~ 247 (449)
T 3kd9_A 207 RLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPNIE 247 (449)
T ss_dssp EESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEEECCH
T ss_pred EeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCccCHH
Confidence 988 6888886653334566778899999999999998753
No 203
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.67 E-value=5.9e-08 Score=92.23 Aligned_cols=96 Identities=13% Similarity=0.130 Sum_probs=74.9
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
..+++|||||+.|+++|..++++|.+|+|+++. . . + ......++.+.+.+.+++.||++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~----~----~---------l----l~~~d~~~~~~~~~~l~~~gV~i 205 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS----D----K---------I----NKLMDADMNQPILDELDKREIPY 205 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESS----S----C---------C----STTSCGGGGHHHHHHHHHTTCCE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeee----c----c---------c----cccccchhHHHHHHHhhccceEE
Confidence 568999999999999999999999999999941 0 0 0 11223567778888889999999
Q ss_pred EEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ +|..++. +.+.+ .++.++.+|.|++|+|.+|+..
T Consensus 206 ~~~~~v~~~~~--~~v~~-~~g~~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 206 RLNEEINAING--NEITF-KSGKVEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp EESCCEEEEET--TEEEE-TTSCEEECSEEEECCCEEESCG
T ss_pred EeccEEEEecC--Ceeee-cCCeEEeeeeEEEEeceecCcH
Confidence 999 6887763 33333 3566799999999999998764
No 204
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.67 E-value=1.3e-07 Score=93.06 Aligned_cols=100 Identities=12% Similarity=0.103 Sum_probs=78.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|+|||+|+.|+++|..|++.|.+|+++++.. .+ ......++.+.+.+.+++.|++
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~--------------------~~-l~~~~~~~~~~l~~~l~~~GV~ 208 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD--------------------QV-MTPVDREMAGFAHQAIRDQGVD 208 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS--------------------SS-CTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC--------------------cc-chhcCHHHHHHHHHHHHHCCCE
Confidence 35689999999999999999999999999999410 00 1123467888888889999999
Q ss_pred EEEe-eEEEEEe-------------------cCCcEEEEE-CCeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDF-------------------KSRPFKVFT-DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~-------------------~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ .+.+++. .++.+.+.. ++.++.+|.||+|+|.+|+..
T Consensus 209 i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 270 (565)
T 3ntd_A 209 LRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQ 270 (565)
T ss_dssp EEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCH
T ss_pred EEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchH
Confidence 9998 6888886 344555554 455799999999999998753
No 205
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.65 E-value=2.1e-08 Score=97.31 Aligned_cols=40 Identities=25% Similarity=0.441 Sum_probs=34.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc-CCCeEEEecccCCCCCCCcc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA-ELKPILFEGWMANDIAPGGQ 100 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~-g~~v~lie~~~~~~~~~gg~ 100 (382)
..+||+|||||++||+||+.|++. |++|+|+| +...+||.
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE----~~~~~GG~ 49 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVD----SNETPGGL 49 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEE----SSSSCCGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEE----CCCCCcCC
Confidence 468999999999999999999885 99999999 44555554
No 206
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.64 E-value=1.9e-07 Score=92.19 Aligned_cols=119 Identities=25% Similarity=0.339 Sum_probs=77.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcC--CCeEEEecccCCC----CCCCcceecCC----------------Cc-------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAE--LKPILFEGWMAND----IAPGGQLTTTS----------------DV------- 107 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~~----~~~gg~~~~~~----------------~~------- 107 (382)
..+||+|||||++|+++|+.|++.| .+|+|||+..... ...||...... ..
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 4589999999999999999999999 9999999742110 01122110000 00
Q ss_pred ------------------ccC-------------CCCC-------CCCChHHHHHHHHHHHHHcC-cEEEEe-eEEEEEe
Q 016820 108 ------------------ENF-------------PGFP-------QGILGGDLMDRCRNQSLRFG-TQIFTE-TVSKVDF 147 (382)
Q Consensus 108 ------------------~~~-------------~~~~-------~~~~~~~~~~~~~~~~~~~g-i~~~~~-~v~~i~~ 147 (382)
..| .+.. ....+..+...+.+.+.+.+ ++++.+ .|+++..
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~ 163 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV 163 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE
Confidence 000 0000 00124578888888888888 999988 6888877
Q ss_pred cCCc---EEEEE--CCe--EEEcCEEEEccCCCCc
Q 016820 148 KSRP---FKVFT--DSK--SVLADTVIVATGAVAK 175 (382)
Q Consensus 148 ~~~~---~~v~~--~~~--~~~~d~lvlA~G~~~~ 175 (382)
+++. +.+.. ++. .+.++.||+|+|....
T Consensus 164 ~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 164 DDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp ETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred eCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 6654 22322 343 5899999999999653
No 207
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.64 E-value=1.4e-07 Score=91.11 Aligned_cols=100 Identities=21% Similarity=0.181 Sum_probs=78.0
Q ss_pred cccEEEECCcHHHHHHHHHHHH----cCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHc
Q 016820 58 KTKVCIIGSGPAAHTAAIYAAR----AELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRF 133 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~----~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
.++|+|||||+.|+++|..|++ .|.+|+++++.. .........++.+.+.+.+++.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~--------------------~~~~~~l~~~~~~~~~~~l~~~ 239 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK--------------------GNMGKILPEYLSNWTMEKVRRE 239 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS--------------------STTTTTSCHHHHHHHHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc--------------------ccccccCCHHHHHHHHHHHHhc
Confidence 5789999999999999999987 478999998310 0001122367788888889999
Q ss_pred CcEEEEe-eEEEEEecCCcEEEEE-CCeEEEcCEEEEccCCCCcCC
Q 016820 134 GTQIFTE-TVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 134 gi~~~~~-~v~~i~~~~~~~~v~~-~~~~~~~d~lvlA~G~~~~~~ 177 (382)
|++++.+ .|..++.+++.+.+.+ ++.++.+|.||+|+|.+|+..
T Consensus 240 GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 240 GVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred CCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHH
Confidence 9999999 6999987666555655 445799999999999998764
No 208
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.64 E-value=1.9e-07 Score=96.03 Aligned_cols=57 Identities=16% Similarity=0.112 Sum_probs=47.4
Q ss_pred ChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcE-EEEECCeEEEcCEEEEccCCCC
Q 016820 118 LGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPF-KVFTDSKSVLADTVIVATGAVA 174 (382)
Q Consensus 118 ~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~-~v~~~~~~~~~d~lvlA~G~~~ 174 (382)
....+...+.+.+.+.|++++.+ .|++|..+++.+ .+.++++++.+|.||+|+|.+.
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADGVIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCcEEECCEEEECCccch
Confidence 45578888888889999999987 799998877664 5777778999999999999864
No 209
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.63 E-value=1.1e-07 Score=93.91 Aligned_cols=99 Identities=11% Similarity=0.110 Sum_probs=78.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|++.|.+|+++++.. .+ ......++.+.+.+.+++.|++
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~--------------------~~-l~~~~~~~~~~l~~~l~~~GV~ 244 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN--------------------QV-MPPIDYEMAAYVHEHMKNHDVE 244 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS--------------------SS-CTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC--------------------cc-cccCCHHHHHHHHHHHHHcCCE
Confidence 35789999999999999999999999999999310 00 0113467888888999999999
Q ss_pred EEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ .|.+++.+++.+.+ .++.++.+|.||+|+|.+|+..
T Consensus 245 i~~~~~v~~i~~~~~~v~~-~~g~~i~~D~Vi~a~G~~p~~~ 285 (588)
T 3ics_A 245 LVFEDGVDALEENGAVVRL-KSGSVIQTDMLILAIGVQPESS 285 (588)
T ss_dssp EECSCCEEEEEGGGTEEEE-TTSCEEECSEEEECSCEEECCH
T ss_pred EEECCeEEEEecCCCEEEE-CCCCEEEcCEEEEccCCCCChH
Confidence 9988 69999876554443 2556799999999999988763
No 210
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.63 E-value=2.7e-08 Score=87.75 Aligned_cols=41 Identities=29% Similarity=0.447 Sum_probs=36.3
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT 102 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~ 102 (382)
..||+||||||+|+++|+.|+++|++|+||| +...+||++.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~E----k~~~~GG~~~ 42 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFD----KSRGSGGRMS 42 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEE----CCCCCCCccc
Confidence 4799999999999999999999999999999 4556777654
No 211
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.62 E-value=1.9e-07 Score=84.67 Aligned_cols=99 Identities=20% Similarity=0.210 Sum_probs=76.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
...+|+|||+|+.|+++|..|++.|.+|+++++.. .+ .....+.+.+.+.+++.|++
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~--------------------~~---~~~~~~~~~l~~~l~~~gv~ 200 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD--------------------GF---RAEKILIKRLMDKVENGNII 200 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS--------------------SC---CCCHHHHHHHHHHHHTSSEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC--------------------cc---ccCHHHHHHHHHhcccCCeE
Confidence 35789999999999999999999999999999410 00 11356677777778889999
Q ss_pred EEEe-eEEEEEecCCc---EEEEE--C-C--eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRP---FKVFT--D-S--KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~---~~v~~--~-~--~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ ++.+++.+++. +.+.. + + .++.+|.||+|+|.+|+..-
T Consensus 201 i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 251 (320)
T 1trb_A 201 LHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAI 251 (320)
T ss_dssp EECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGG
T ss_pred EEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHH
Confidence 9988 79999876644 33432 1 2 46999999999999887643
No 212
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.61 E-value=1e-07 Score=91.50 Aligned_cols=98 Identities=16% Similarity=0.147 Sum_probs=73.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|++.|.+|+++++.. .+......+++.+.+++.++ ++
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~--------------------~~l~~~~d~~~~~~l~~~l~---v~ 227 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD--------------------RALITLEDQDIVNTLLSILK---LN 227 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS--------------------SSCTTSCCHHHHHHHHHHHC---CC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC--------------------cCCCCCCCHHHHHHHHhcCE---EE
Confidence 45789999999999999999999999999999310 00001114566666666554 88
Q ss_pred EEEe-eEEEEEecC-CcEEEEEC---Ce--EEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKS-RPFKVFTD---SK--SVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~-~~~~v~~~---~~--~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ .+.+++.++ +.+.+..+ +. ++.+|.||+|+|.+|+..
T Consensus 228 i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 228 IKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp EECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred EEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 8888 688998766 66666554 33 699999999999998876
No 213
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.59 E-value=3.5e-07 Score=91.44 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=31.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHH-----cCCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAAR-----AELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~-----~g~~v~lie~~ 90 (382)
..+||+|||||++|+++|..|++ .|++|+|||+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~ 45 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR 45 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC
Confidence 35799999999999999999999 99999999974
No 214
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.58 E-value=2.6e-08 Score=92.99 Aligned_cols=106 Identities=22% Similarity=0.161 Sum_probs=71.8
Q ss_pred ccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecCC--------------C-cc-c-----------
Q 016820 59 TKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTTS--------------D-VE-N----------- 109 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~--------------~-~~-~----------- 109 (382)
+||+|||||++|+++|..|++. |++|+|+|+..... ..|..+.... . .. .
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE-VLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC-CCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC-cceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe
Confidence 4899999999999999999999 99999999743221 1121111000 0 00 0
Q ss_pred ----CC---CCC-CCCChHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCc
Q 016820 110 ----FP---GFP-QGILGGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAK 175 (382)
Q Consensus 110 ----~~---~~~-~~~~~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~ 175 (382)
+. +.+ ..+...++.+.+.+.+.+.|++++.+ +|++++.. .++.+|.||.|+|.++.
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------CGGGCSEEEECCGGGGG
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------ccccCCEEEECCCCCch
Confidence 00 000 12456788999999998889999888 57666531 12579999999999775
No 215
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.57 E-value=1.4e-07 Score=89.97 Aligned_cols=56 Identities=13% Similarity=0.211 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEEe-eEEEEEe---------------cCCc-EEEEECCeEE--EcCEEEEccCCCC
Q 016820 119 GGDLMDRCRNQSLRFGTQIFTE-TVSKVDF---------------KSRP-FKVFTDSKSV--LADTVIVATGAVA 174 (382)
Q Consensus 119 ~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~---------------~~~~-~~v~~~~~~~--~~d~lvlA~G~~~ 174 (382)
...+...+.+.+.+.|++++.+ +|+++.. +++. +.+.++++++ .+|.||+|+|.+.
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCEEeecCCEEEECCCcCH
Confidence 4477778888888899999997 7999986 4444 3566766688 9999999999864
No 216
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.57 E-value=1.7e-07 Score=92.78 Aligned_cols=99 Identities=15% Similarity=0.081 Sum_probs=73.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
...+|+|||||+.|+++|..|+++|.+|+++++. . -++ ...+++.+.+.+.+++.||+
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~---------~--------~l~-----~~d~~~~~~~~~~l~~~gv~ 342 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLGGDVTVMVRS---------I--------LLR-----GFDQQMAEKVGDYMENHGVK 342 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS---------C--------SST-----TSCHHHHHHHHHHHHHTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC---------c--------CcC-----cCCHHHHHHHHHHHHhCCCE
Confidence 3468999999999999999999999999999931 0 011 12357778888888899999
Q ss_pred EEEe-eEEEEEec------C---CcEEEE--E-CCeEE--EcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFK------S---RPFKVF--T-DSKSV--LADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~------~---~~~~v~--~-~~~~~--~~d~lvlA~G~~~~~~ 177 (382)
++.+ .+..+... + +.+.+. . ++.++ .+|.||+|+|.+|+..
T Consensus 343 i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 343 FAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp EEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGG
T ss_pred EEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccC
Confidence 9988 56666432 1 334333 2 44444 4999999999998764
No 217
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.57 E-value=1e-06 Score=82.06 Aligned_cols=94 Identities=26% Similarity=0.421 Sum_probs=68.2
Q ss_pred cEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc--------------------------------------------
Q 016820 207 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA-------------------------------------------- 242 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~-------------------------------------------- 242 (382)
.|+|||+|+.|+-+|..|++.|.+|+++++++.+..
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 599999999999999999999999999998654300
Q ss_pred -------------------hHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCC
Q 016820 243 -------------------SKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGH 303 (382)
Q Consensus 243 -------------------~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~ 303 (382)
...+ .+...+.|++++.++++..+..+++. +..+.... .++..++.+|+||-|.|.
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L-~~~a~~~G~~~~~~~~v~~~~~~~~~--~~~v~~~~--~~~~~~~~a~~vIgAdG~ 160 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHL-AALAAKAGADVWVKSPALGVIKENGK--VAGAKIRH--NNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHH-HHHHHHHTCEEESSCCEEEEEEETTE--EEEEEEEE--TTEEEEEEEEEEEECCCT
T ss_pred ccccccCCceeEEEEHHHHHHHH-HHHHHhcCcEEeeeeeeeeeeeccce--eeeeeecc--cccceEEEEeEEEeCCcc
Confidence 0111 12234468899999999988877653 33333332 344567899999999997
Q ss_pred CC
Q 016820 304 EP 305 (382)
Q Consensus 304 ~p 305 (382)
..
T Consensus 161 ~S 162 (397)
T 3oz2_A 161 ES 162 (397)
T ss_dssp TC
T ss_pred cc
Confidence 65
No 218
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.57 E-value=2.5e-07 Score=88.85 Aligned_cols=50 Identities=22% Similarity=0.230 Sum_probs=39.5
Q ss_pred HHHHHHHHHHcCcEEEEe-eEEEEEecCCc-EEEEECCeEEEcCEEEEccCC
Q 016820 123 MDRCRNQSLRFGTQIFTE-TVSKVDFKSRP-FKVFTDSKSVLADTVIVATGA 172 (382)
Q Consensus 123 ~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~-~~v~~~~~~~~~d~lvlA~G~ 172 (382)
.+.+.+.+.+.|++++.+ .|+.|..+++. |.|.++++++.+|+||+|++.
T Consensus 237 ~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 237 PQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSCEEEESEEEECSCH
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCeEEEcCEEEECCCH
Confidence 344444555668899998 69999887666 888888888999999999986
No 219
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.56 E-value=1.9e-08 Score=94.02 Aligned_cols=88 Identities=19% Similarity=0.084 Sum_probs=69.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++|+|||+|+.|+++|..|++.|.+|+++|+.. .+......+++.+.+.+.+++.|+++
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~--------------------~~l~~~~~~~~~~~~~~~l~~~gV~~ 205 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILE--------------------YPLERQLDRDGGLFLKDKLDRLGIKI 205 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS--------------------SSCTTTSCHHHHHHHHHHHHTTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC--------------------ccchhhcCHHHHHHHHHHHHhCCCEE
Confidence 5789999999999999999999999999999410 00011234678888888899999999
Q ss_pred EEe-eEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ .+.++ +.++.+|.||+|+|.+|+..
T Consensus 206 ~~~~~v~~i------------g~~~~~D~vv~a~G~~p~~~ 234 (385)
T 3klj_A 206 YTNSNFEEM------------GDLIRSSCVITAVGVKPNLD 234 (385)
T ss_dssp ECSCCGGGC------------HHHHHHSEEEECCCEEECCG
T ss_pred EeCCEEEEc------------CeEEecCeEEECcCcccChh
Confidence 887 45444 34588999999999998764
No 220
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.54 E-value=8.5e-07 Score=87.32 Aligned_cols=56 Identities=21% Similarity=0.277 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEEe-eEEEEEec-CCcE---EEEE--CCe--EEEcCEEEEccCCCC
Q 016820 119 GGDLMDRCRNQSLRFGTQIFTE-TVSKVDFK-SRPF---KVFT--DSK--SVLADTVIVATGAVA 174 (382)
Q Consensus 119 ~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~-~~~~---~v~~--~~~--~~~~d~lvlA~G~~~ 174 (382)
+..+...+.+.+.+.|++++.+ .|+++..+ ++.+ .+.. ++. .+.++.||+|||...
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 3577888888888899999998 68888765 4433 3322 232 589999999999964
No 221
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.53 E-value=2.9e-07 Score=88.17 Aligned_cols=38 Identities=24% Similarity=0.378 Sum_probs=32.0
Q ss_pred cEEEEe-eEEEEEecCCcEEEEECCe-EEEcCEEEEccCC
Q 016820 135 TQIFTE-TVSKVDFKSRPFKVFTDSK-SVLADTVIVATGA 172 (382)
Q Consensus 135 i~~~~~-~v~~i~~~~~~~~v~~~~~-~~~~d~lvlA~G~ 172 (382)
.+++.+ .|++|+.+++.+.+.++++ ++.+|+||+|+..
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCH
Confidence 467777 6999998888888888655 7999999999986
No 222
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.52 E-value=3.5e-07 Score=83.55 Aligned_cols=98 Identities=17% Similarity=0.159 Sum_probs=75.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
...+|+|||+|..|+++|..|++.|.+|+++++.. .+ ....+..+.+++.+++.|++
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~-----------------~~------~~~~~~~~~l~~~l~~~gv~ 207 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP-----------------QF------RAHEASVKELMKAHEEGRLE 207 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-----------------SC------CSCHHHHHHHHHHHHTTSSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC-----------------cc------CccHHHHHHHHhccccCCeE
Confidence 35789999999999999999999999999999410 00 11245667778888888999
Q ss_pred EEEe-eEEEEEecCC--cEEEEE--CC--eEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSR--PFKVFT--DS--KSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~--~~~v~~--~~--~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ .+.+++.+++ .+.+.. ++ .++.+|.||+|+|.+|+..
T Consensus 208 v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (335)
T 2zbw_A 208 VLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLG 255 (335)
T ss_dssp EETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECG
T ss_pred EecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCch
Confidence 9998 7889987544 234432 34 4699999999999998764
No 223
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.51 E-value=7.9e-07 Score=88.47 Aligned_cols=50 Identities=18% Similarity=0.128 Sum_probs=39.8
Q ss_pred CCceeeCCCCCcCCCCceEEecccCC-ch-------hhHHHHHHhhHHHHHHHHHHHHH
Q 016820 319 DGYIITKPGTTHTSVPGVFAAGDVQD-KK-------YRQAVTAAGTGCMAALEAEHYLQ 369 (382)
Q Consensus 319 ~g~i~vd~~~~~t~~~~vya~GD~~~-~~-------~~~~~~a~~~g~~aa~~i~~~l~ 369 (382)
-|.|.+|. ..++..|++||+|+|+. .. -.+...++..|+.|+.++++++.
T Consensus 372 ~GGi~vd~-~~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 372 MGGIRTDY-RGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp CCEEECCT-TSBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEECC-CCceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 58999998 67789999999999752 11 22456788899999999998875
No 224
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.50 E-value=8.1e-07 Score=87.77 Aligned_cols=56 Identities=23% Similarity=0.357 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCc---EEEEE--CCe--EEEcCEEEEccCCCC
Q 016820 119 GGDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRP---FKVFT--DSK--SVLADTVIVATGAVA 174 (382)
Q Consensus 119 ~~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~---~~v~~--~~~--~~~~d~lvlA~G~~~ 174 (382)
+..+...+.+.+.+.|++++.+ .|.++..+++. +.+.. ++. .+.++.||+|||...
T Consensus 154 G~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 4578888888888899999998 68888766553 23332 332 589999999999965
No 225
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.49 E-value=1.2e-06 Score=86.09 Aligned_cols=34 Identities=29% Similarity=0.281 Sum_probs=31.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~ 90 (382)
..+||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~ 64 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQ 64 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4589999999999999999999999999999963
No 226
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.49 E-value=8.7e-07 Score=81.97 Aligned_cols=106 Identities=24% Similarity=0.221 Sum_probs=74.7
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcC-cE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFG-TQ 136 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-i~ 136 (382)
.++|+|||+|..|+.+|..|++.|.+|+++++. ..+... .+ .+.......+.+.+.+.+++.| ++
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~--------~~~~~~----~~--d~~~~~~~~~~~~l~~~l~~~g~v~ 231 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTST--------TGLNDP----DA--DPSVRLSPYTRQRLGNVIKQGARIE 231 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------CTTSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecC--------CCCCCC----CC--CCCccCCHHHHHHHHHHHhhCCcEE
Confidence 358999999999999999999999999999942 011100 00 0011123566677888888886 99
Q ss_pred EEEe-eEEEEEecCCcEEEEEC-CeEEE-cCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPFKVFTD-SKSVL-ADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~v~~~-~~~~~-~d~lvlA~G~~~~~~ 177 (382)
++.+ .+..++.+++.+.+... +..+. +|.+|+|+|.+|+..
T Consensus 232 ~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~ 275 (369)
T 3d1c_A 232 MNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKN 275 (369)
T ss_dssp EECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGS
T ss_pred EecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccc
Confidence 9988 68899766665555553 44454 699999999998763
No 227
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.48 E-value=4.3e-07 Score=88.52 Aligned_cols=50 Identities=20% Similarity=0.262 Sum_probs=38.9
Q ss_pred CCceeeCCCCCcCCCCceEEecccC-Cc-------hhhHHHHHHhhHHHHHHHHHHHHH
Q 016820 319 DGYIITKPGTTHTSVPGVFAAGDVQ-DK-------KYRQAVTAAGTGCMAALEAEHYLQ 369 (382)
Q Consensus 319 ~g~i~vd~~~~~t~~~~vya~GD~~-~~-------~~~~~~~a~~~g~~aa~~i~~~l~ 369 (382)
.|.+.+|. ..++..|++||+|+|+ +. .-.....|+..|+.|++++++++.
T Consensus 354 ~GGi~vd~-~~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~ 411 (540)
T 1chu_A 354 CGGVMVDD-HGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMP 411 (540)
T ss_dssp SCEEECCT-TCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cCcEEECC-CCCCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 58899998 5678999999999987 21 122456788889999999988764
No 228
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.48 E-value=3.4e-07 Score=88.40 Aligned_cols=96 Identities=22% Similarity=0.246 Sum_probs=71.6
Q ss_pred ccEEEECCcHHHHHHHHHHHHc--------------CCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHH
Q 016820 59 TKVCIIGSGPAAHTAAIYAARA--------------ELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMD 124 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~--------------g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (382)
..++|||||++|+++|.+|+++ ..+|+|+|.. +.. .....+++.+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~--------------------~~i-l~~~~~~~~~ 276 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEAL--------------------PIV-LNMFEKKLSS 276 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSS--------------------SSS-STTSCHHHHH
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccc--------------------ccc-ccCCCHHHHH
Confidence 4699999999999999998764 3689999931 000 1123478899
Q ss_pred HHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECC-----eEEEcCEEEEccCCCCc
Q 016820 125 RCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDS-----KSVLADTVIVATGAVAK 175 (382)
Q Consensus 125 ~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~-----~~~~~d~lvlA~G~~~~ 175 (382)
++++.+++.||+++.+ .|.+++.+...+.....+ .++.+|.||+|+|.+|+
T Consensus 277 ~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 277 YAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp HHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred HHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 9999999999999998 688887543322232222 35999999999999875
No 229
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.46 E-value=2.9e-08 Score=95.90 Aligned_cols=145 Identities=12% Similarity=0.056 Sum_probs=90.4
Q ss_pred EcCEEEEccCCCCcCCCCCCCcc---ccCCCcceeeec---------cCCCCCCCCCcEEEEcCCchHHHHHHHHhhcCC
Q 016820 162 LADTVIVATGAVAKKLQFPGSDA---FWNRGISACAVC---------DGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGS 229 (382)
Q Consensus 162 ~~d~lvlA~G~~~~~~~~~g~~~---~~~~~~~~~~~~---------~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~ 229 (382)
.||.++.++|.+|..+++.+.+. +........... ..........+|+|||+|+.|+.+|..|.+.|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~ 116 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGA 116 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCC
Confidence 35678999999987665544322 111111111000 000002345789999999999999999999999
Q ss_pred EEEEEEeCCCCcc----------------------------------h-HH---HHHHhccCCCcEEEcCceeEEEEecC
Q 016820 230 KVYIIHRRDSFRA----------------------------------S-KI---MQNRALTNPKIDVIWNSVVLEAYGEG 271 (382)
Q Consensus 230 ~v~~~~~~~~~~~----------------------------------~-~~---~~~~~l~~~gv~~~~~~~v~~i~~~~ 271 (382)
+|+++++.+.+.. . .. .+.+.+++.|++++.++.+.++..++
T Consensus 117 ~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~ 196 (497)
T 2bry_A 117 RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPP 196 (497)
T ss_dssp EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCC
T ss_pred eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEec
Confidence 9999998765410 0 11 11233445799999999999998752
Q ss_pred -CceeeeeEEEEeccCCceEEEecCeEEEeeCCCCCh
Q 016820 272 -DKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPAT 307 (382)
Q Consensus 272 -~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~ 307 (382)
++. ...+.+....+++...+.+|.||.|+|..+..
T Consensus 197 ~~~~-~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 197 RKGS-GWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp STTC-CBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred CCCC-EEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 111 22344432101222468999999999998754
No 230
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.46 E-value=6.5e-07 Score=82.67 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=74.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
...+|+|||+|..|+.+|..|++.|.+|+++++.. .+. ..+++.+.+.+..++.|++
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~-----------------~~~------~~~~~~~~l~~~~~~~gv~ 218 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH-----------------EFQ------GHGKTAHEVERARANGTID 218 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-----------------SCS------SCSHHHHSSHHHHHHTSEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-----------------CCC------CCHHHHHHHHHHhhcCceE
Confidence 35789999999999999999999999999999410 000 1124566677777888999
Q ss_pred EEEe-eEEEEEecCCc---EEEEE-CC--eEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRP---FKVFT-DS--KSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~---~~v~~-~~--~~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ ++.+++.+++. +.+.. ++ ..+.+|.||+|+|..|+..
T Consensus 219 i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 266 (360)
T 3ab1_A 219 VYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLG 266 (360)
T ss_dssp EESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCG
T ss_pred EEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHH
Confidence 9998 79999877553 33432 34 4699999999999988754
No 231
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.41 E-value=8.5e-07 Score=76.65 Aligned_cols=152 Identities=14% Similarity=0.188 Sum_probs=102.9
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC-----------------C-------------cchHHHHHHhccCC-
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS-----------------F-------------RASKIMQNRALTNP- 254 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~-----------------~-------------~~~~~~~~~~l~~~- 254 (382)
.+|+|||+|+.|+++|..|.+.|.+|+++++... + .....+ .+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l-~~~~~~~~ 82 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARA-KYLLEGLR 82 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHH-HHHHHTCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHH-HHHHHcCC
Confidence 4799999999999999999999999999998621 0 111222 3445565
Q ss_pred CcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChh--------------------hhc---
Q 016820 255 KIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATK--------------------FVD--- 311 (382)
Q Consensus 255 gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~--------------------~~~--- 311 (382)
|++++ +.+++++..++++ +..+.+.+ + ..+.+|.||+|+|..++.. +..
T Consensus 83 gv~i~-~~~v~~i~~~~~~--v~~v~~~~---g--~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~ 154 (232)
T 2cul_A 83 PLHLF-QATATGLLLEGNR--VVGVRTWE---G--PPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLS 154 (232)
T ss_dssp TEEEE-ECCEEEEEEETTE--EEEEEETT---S--CCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHH
T ss_pred CcEEE-EeEEEEEEEeCCE--EEEEEECC---C--CEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHH
Confidence 99998 5799999877642 33344322 3 4799999999999955432 111
Q ss_pred -ccccccCCC--------c-------eeeC-----C-CCCcCCCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHH
Q 016820 312 -GQLDLHSDG--------Y-------IITK-----P-GTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYL 368 (382)
Q Consensus 312 -~~~~~~~~g--------~-------i~vd-----~-~~~~t~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l 368 (382)
.++.++... . ..+. . ....|++|+||++|||+ . ......++.||+.+|.+|.+.|
T Consensus 155 ~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~-~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 155 RLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-R-EGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp HTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-S-CCCHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-c-CccHHHHHHHHHHHHHHHHhhc
Confidence 112111111 0 0010 0 01236899999999999 4 4577889999999999998876
No 232
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.38 E-value=6.2e-07 Score=82.13 Aligned_cols=49 Identities=22% Similarity=0.269 Sum_probs=39.9
Q ss_pred CCcC-CCCceEEecccCCchhhHHHHHHhhHHHHHHHHHHHHHHccCccccc
Q 016820 328 TTHT-SVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIGSQEDKS 378 (382)
Q Consensus 328 ~~~t-~~~~vya~GD~~~~~~~~~~~a~~~g~~aa~~i~~~l~~~~~~~~~~ 378 (382)
++++ ..+|+|++|...+. ..-..|..||..|+.|++..+.++++...+.
T Consensus 322 tle~k~~~~Lf~AGqi~G~--~Gy~eAaa~Gl~AG~naa~~~~g~~p~~l~r 371 (443)
T 3g5s_A 322 TLEFREAEGLYAAGVLAGV--EGYLESAATGFLAGLNAARKALGLPPVAPPE 371 (443)
T ss_dssp TSEETTEEEEEECGGGGTB--CSHHHHHHHHHHHHHHHHHHHTTCCCCCCCT
T ss_pred hceecCCCCEEECcccccc--HHHHHHHHhHHHHHHHHHHHhcCCCCCCCCh
Confidence 5555 58999999999975 3445999999999999999999988665443
No 233
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.35 E-value=9.4e-07 Score=80.31 Aligned_cols=95 Identities=14% Similarity=0.141 Sum_probs=67.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|+|||+|..|+++|..|++.|.+|+++++.. . + . ....+. ++..++.|++
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~----~-------------~---~---~~~~~~---~~l~~~~gv~ 204 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD----T-------------L---R---ANKVAQ---ARAFANPKMK 204 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS----S-------------C---C---SCHHHH---HHHHTCTTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC----c-------------C---C---cchHHH---HHHHhcCCce
Confidence 34789999999999999999999999999999410 0 0 0 012222 2222346999
Q ss_pred EEEe-eEEEEEecCC--cEEEEE--CCe--EEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSR--PFKVFT--DSK--SVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~--~~~v~~--~~~--~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ ++.+++.+++ .+.+.. ++. ++.+|.||+|+|.+|+..
T Consensus 205 i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 252 (325)
T 2q7v_A 205 FIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTA 252 (325)
T ss_dssp EECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred EecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChH
Confidence 9988 6889987543 244442 343 689999999999998764
No 234
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.34 E-value=1.3e-06 Score=79.34 Aligned_cols=167 Identities=16% Similarity=0.219 Sum_probs=108.4
Q ss_pred CcEEEEcCCchHHHHHHHHhhc--CCEEEEEEeCCCCc-----------------------------c-----------h
Q 016820 206 KPLAVIGGGDSAMEEANFLTKY--GSKVYIIHRRDSFR-----------------------------A-----------S 243 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~--g~~v~~~~~~~~~~-----------------------------~-----------~ 243 (382)
..|+|||+|..|+.+|..|.+. |.+|+++++.+.+. + .
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 4799999999999999999997 99999999875431 0 0
Q ss_pred ----HHHHHHhccCCCcEEEcCceeEEEEecCC-----------------ceeeeeEEEEec---cC------CceEEEe
Q 016820 244 ----KIMQNRALTNPKIDVIWNSVVLEAYGEGD-----------------KKVLGGLKVKNL---VT------GQVSDLK 293 (382)
Q Consensus 244 ----~~~~~~~l~~~gv~~~~~~~v~~i~~~~~-----------------g~~~~~v~~~~~---~~------~~~~~~~ 293 (382)
..+.+++.+..|++++.++.+.++..+++ +..+.+|.+... .. .+...+.
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 12222333336999999999999876552 235667776532 01 1346799
Q ss_pred cCeEEEeeCCCCCh-hhhc---cccccc--CCC--ce--------eeCCCCCcCCCCceEEecccCC-----chhhH-HH
Q 016820 294 VSGLFFAIGHEPAT-KFVD---GQLDLH--SDG--YI--------ITKPGTTHTSVPGVFAAGDVQD-----KKYRQ-AV 351 (382)
Q Consensus 294 ~D~vi~~~G~~p~~-~~~~---~~~~~~--~~g--~i--------~vd~~~~~t~~~~vya~GD~~~-----~~~~~-~~ 351 (382)
+++||.|||..... .++. ..+.+. -.| .+ .|+. +.+ -+|++|++|=.+. +.... ..
T Consensus 240 Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~-t~~-v~~gl~~~gm~~~~~~g~~rmgp~fg 317 (344)
T 3jsk_A 240 APVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNN-TRE-IVPGLIVGGMELSEIDGANRMGPTFG 317 (344)
T ss_dssp CSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHT-CEE-EETTEEECGGGHHHHHTCEECCSCCH
T ss_pred cCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhccc-Cce-EcCCEEEechhhHhhcCCCCCCcccc
Confidence 99999999988652 1111 112111 111 11 1221 222 2799999998763 22223 33
Q ss_pred HHHhhHHHHHHHHHHHHHHccCc
Q 016820 352 TAAGTGCMAALEAEHYLQEIGSQ 374 (382)
Q Consensus 352 ~a~~~g~~aa~~i~~~l~~~~~~ 374 (382)
.-..+|+.+|+.|.+.|...+.+
T Consensus 318 ~m~~sg~~~a~~~~~~~~~~~~~ 340 (344)
T 3jsk_A 318 AMALSGVKAAHEAIRVFDLRKAQ 340 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecCHHHHHHHHHHHHhhhhh
Confidence 44589999999999999876644
No 235
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.33 E-value=1.7e-06 Score=78.39 Aligned_cols=93 Identities=14% Similarity=0.148 Sum_probs=68.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI 137 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 137 (382)
.++++|||+|+.|+++|..|++.|.+|+++++. . .+ ..... +.+.+.+.|+++
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~----~----------------~~---~~~~~----l~~~l~~~gv~i 207 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYM----P----------------KY---MCENA----YVQEIKKRNIPY 207 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSS----S----------------SC---CSCHH----HHHHHHHTTCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcC----C----------------cc---CCCHH----HHHHHhcCCcEE
Confidence 478999999999999999999999999999941 0 00 01122 334445789999
Q ss_pred EEe-eEEEEEecCC---cEEEEE--CCe--EEEcCEEEEccCCCCcCC
Q 016820 138 FTE-TVSKVDFKSR---PFKVFT--DSK--SVLADTVIVATGAVAKKL 177 (382)
Q Consensus 138 ~~~-~v~~i~~~~~---~~~v~~--~~~--~~~~d~lvlA~G~~~~~~ 177 (382)
+.+ ++.+++.+++ .+.+.. ++. ++.+|.||+|+|..|+..
T Consensus 208 ~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (319)
T 3cty_A 208 IMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTS 255 (319)
T ss_dssp ECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCG
T ss_pred EcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChH
Confidence 988 6889987654 244442 343 589999999999988764
No 236
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.32 E-value=1.9e-06 Score=78.47 Aligned_cols=94 Identities=10% Similarity=0.107 Sum_probs=68.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHH-cCc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLR-FGT 135 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gi 135 (382)
..++++|||+|+.|+.+|..|.+.|.+|+++++.. .+ .. ...+.+.+.+ .|+
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~--------------------~~---~~----~~~~~~~l~~~~gv 224 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD--------------------HL---RA----STIMQKRAEKNEKI 224 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS--------------------SC---CS----CHHHHHHHHHCTTE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC--------------------cc---CC----CHHHHHHHHhcCCe
Confidence 35789999999999999999999999999999410 00 00 1233344444 499
Q ss_pred EEEEe-eEEEEEecCCc---EEEEE--C--CeEEEcCEEEEccCCCCcCC
Q 016820 136 QIFTE-TVSKVDFKSRP---FKVFT--D--SKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~---~~v~~--~--~~~~~~d~lvlA~G~~~~~~ 177 (382)
+++.+ .+.+++.+++. +.+.. + +.++.+|.||+|+|..|+..
T Consensus 225 ~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 274 (338)
T 3itj_A 225 EILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATK 274 (338)
T ss_dssp EEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCG
T ss_pred EEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChh
Confidence 99988 68899877653 33332 1 24699999999999988764
No 237
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.31 E-value=2.8e-06 Score=76.81 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=67.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
...+++|||+|+.|+.+|..|.+.|.+|+++++.. .+. ..++ .+++..++.|++
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~-----------------~~~------~~~~---~~~~~~~~~gv~ 206 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD-----------------TFK------AQPI---YVETVKKKPNVE 206 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS-----------------SCC------SCHH---HHHHHHTCTTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC-----------------CCC------cCHH---HHHHHHhCCCcE
Confidence 45789999999999999999999999999999410 000 0122 233334456999
Q ss_pred EEEe-eEEEEEecCCc--EEEEE--CCe--EEEcCEEEEccCCCCcC
Q 016820 137 IFTE-TVSKVDFKSRP--FKVFT--DSK--SVLADTVIVATGAVAKK 176 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~--~~v~~--~~~--~~~~d~lvlA~G~~~~~ 176 (382)
++.+ .+.+++.+++. +.+.. ++. ++.+|.||+|+|..|+.
T Consensus 207 ~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 253 (323)
T 3f8d_A 207 FVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPT 253 (323)
T ss_dssp EECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCH
T ss_pred EEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCCh
Confidence 9998 59999877543 33332 133 69999999999998864
No 238
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.31 E-value=8.8e-07 Score=79.89 Aligned_cols=96 Identities=18% Similarity=0.150 Sum_probs=69.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+.+|..|.+.|.+|+++++.. .+ ....+ .+++..++.|++
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~--------------------~~---~~~~~---~~~~~~~~~gv~ 199 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICSKIYLIHRRD--------------------EF---RAAPS---TVEKVKKNEKIE 199 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS--------------------SC---BSCHH---HHHHHHHCTTEE
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC--------------------CC---CCCHH---HHHHHHhcCCeE
Confidence 45789999999999999999999999999999410 00 01122 233444678999
Q ss_pred EEEe-eEEEEEecCCc---EEEEE-CCe--EEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSRP---FKVFT-DSK--SVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~---~~v~~-~~~--~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ .+.+++.+++. +.+.. ++. ++.+|.+|+|+|..|+...
T Consensus 200 ~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 248 (315)
T 3r9u_A 200 LITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEI 248 (315)
T ss_dssp EECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGG
T ss_pred EEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchh
Confidence 9988 78899877643 33432 332 6899999999999887653
No 239
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.30 E-value=4.3e-07 Score=86.92 Aligned_cols=119 Identities=16% Similarity=0.058 Sum_probs=68.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCcceecCCCcc----cCCCCC----------------
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA--ELKPILFEGWMANDIAPGGQLTTTSDVE----NFPGFP---------------- 114 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~----~~~~~~---------------- 114 (382)
..++|+|||+|..|+++|..|++. +.+|+++++...--......+....... .+...+
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 305 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNY 305 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCC
Confidence 357999999999999999999999 9999999952110000000000000000 000000
Q ss_pred CCCChH---HHHHHH-HHHH-HHcCcEEEEe-eEEEEEecCCcEEEEEC----Ce--EEEcCEEEEccCCCCc
Q 016820 115 QGILGG---DLMDRC-RNQS-LRFGTQIFTE-TVSKVDFKSRPFKVFTD----SK--SVLADTVIVATGAVAK 175 (382)
Q Consensus 115 ~~~~~~---~~~~~~-~~~~-~~~gi~~~~~-~v~~i~~~~~~~~v~~~----~~--~~~~d~lvlA~G~~~~ 175 (382)
..+... ++.+.+ ++.. .+.+++++.+ .|+.+..+++.+.+... +. ++.+|.||+|||.+|+
T Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 306 SVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 000111 111111 1111 1258999988 68899887777766542 33 3899999999999987
No 240
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.30 E-value=2.3e-06 Score=77.19 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=67.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|+|||+|+.|+++|..|++.|.+|+++++. .. + . ..+++.+. ..++.||+
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~----~~-------------~---~---~~~~~~~~---l~~~~gv~ 195 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRR----DG-------------F---R---CAPITLEH---AKNNDKIE 195 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSS----SS-------------C---C---SCHHHHHH---HHTCTTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeC----Cc-------------c---C---CCHHHHHH---HhhCCCeE
Confidence 3478999999999999999999999999999941 00 0 0 11222222 22346999
Q ss_pred EEEe-eEEEEEecCCc---EEEEE--CCe--EEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRP---FKVFT--DSK--SVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~---~~v~~--~~~--~~~~d~lvlA~G~~~~~~ 177 (382)
++.+ .+.+++.+++. +.+.. ++. ++.+|.||+|+|..|+.+
T Consensus 196 v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 244 (311)
T 2q0l_A 196 FLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNA 244 (311)
T ss_dssp EETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCG
T ss_pred EEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChh
Confidence 9988 68888876443 34442 343 689999999999998764
No 241
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.29 E-value=3.1e-06 Score=77.61 Aligned_cols=90 Identities=20% Similarity=0.212 Sum_probs=69.0
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc-------------------------------------chHHHHH
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR-------------------------------------ASKIMQN 248 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~-------------------------------------~~~~~~~ 248 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. .......
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 479999999999999999999999999999876421 0011123
Q ss_pred HhccCCCcEEEcCceeEEEEecCCceeeeeEE-EEeccCCceEEEecCeEEEeeCCC
Q 016820 249 RALTNPKIDVIWNSVVLEAYGEGDKKVLGGLK-VKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 249 ~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~-~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
+.+++.|++++.++++.+++.++++ +. +.. .++ .+.+|.+|+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~-----~~~v~~---~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGER-----LRVVAR---DGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTE-----EEEEET---TSC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCc-----EEEEEe---CCC-EEEeCEEEECCCCC
Confidence 4455679999999999999988763 44 443 333 79999999999964
No 242
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.29 E-value=3.3e-06 Score=83.96 Aligned_cols=45 Identities=11% Similarity=0.169 Sum_probs=36.3
Q ss_pred CCcCCCCceEEecccCCc-hhhHHHHHHhhHHHHHHHHHHHHHHcc
Q 016820 328 TTHTSVPGVFAAGDVQDK-KYRQAVTAAGTGCMAALEAEHYLQEIG 372 (382)
Q Consensus 328 ~~~t~~~~vya~GD~~~~-~~~~~~~a~~~g~~aa~~i~~~l~~~~ 372 (382)
..+|+.|+|||+|||++. ....+..+..+|+.++.++++++.+..
T Consensus 447 ~~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~~~~ 492 (662)
T 3gyx_A 447 NRMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYLDHK 492 (662)
T ss_dssp TTBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHhhCC
Confidence 568999999999999852 233366777889999999999998753
No 243
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.27 E-value=7.9e-06 Score=81.34 Aligned_cols=35 Identities=37% Similarity=0.385 Sum_probs=31.8
Q ss_pred ccccEEEECCcHHHHHHHHHHH---H-cCCCeEEEeccc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAA---R-AELKPILFEGWM 91 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~---~-~g~~v~lie~~~ 91 (382)
..+||||||||+||+++|+.|+ + .|.+|+||||..
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 4689999999999999999999 6 899999999753
No 244
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.26 E-value=4e-06 Score=75.52 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=68.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHH-cCc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLR-FGT 135 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gi 135 (382)
..++|+|||+|+.|+++|..|++.|.+|+++++.. . +. .. ..+.+.+.+ .|+
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~----~----------------~~---~~----~~~~~~l~~~~gv 195 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP----E----------------MK---AD----QVLQDKLRSLKNV 195 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS----S----------------CC---SC----HHHHHHHHTCTTE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc----c----------------cC---cc----HHHHHHHhhCCCe
Confidence 35789999999999999999999999999999410 0 00 11 223344455 699
Q ss_pred EEEEe-eEEEEEecCCc---EEEEE--CC--eEEEcCEEEEccCCCCcCC
Q 016820 136 QIFTE-TVSKVDFKSRP---FKVFT--DS--KSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~---~~v~~--~~--~~~~~d~lvlA~G~~~~~~ 177 (382)
+++.+ ++.+++.+++. +.+.. ++ .++.+|.||+|+|..|+..
T Consensus 196 ~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 245 (310)
T 1fl2_A 196 DIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTN 245 (310)
T ss_dssp EEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred EEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCch
Confidence 99988 78899876543 33432 13 3589999999999988754
No 245
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.26 E-value=2.7e-06 Score=80.00 Aligned_cols=98 Identities=18% Similarity=0.190 Sum_probs=74.1
Q ss_pred CcEEEEcCCchHHHHHHHHhh---cCCEEEEEEeCCCCcc-----------------hHHHHHHhccCCCcEEEcCceeE
Q 016820 206 KPLAVIGGGDSAMEEANFLTK---YGSKVYIIHRRDSFRA-----------------SKIMQNRALTNPKIDVIWNSVVL 265 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~---~g~~v~~~~~~~~~~~-----------------~~~~~~~~l~~~gv~~~~~~~v~ 265 (382)
++|+|||+|..|+.+|..|.+ .+.+|+++++.+.+.. ...+ .+.+++.|++++.+ ++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gv~~~~~-~v~ 79 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDL-SEALPEKGIQFQEG-TVE 79 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEH-HHHTGGGTCEEEEC-EEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHH-HHHHhhCCeEEEEe-eEE
Confidence 579999999999999999999 8899999998875411 1122 35566789999977 899
Q ss_pred EEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc
Q 016820 266 EAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD 311 (382)
Q Consensus 266 ~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~ 311 (382)
.++.++.. |.+.+. .+...++.+|.+++|+|.+|+.+.+.
T Consensus 80 ~i~~~~~~-----V~~~~g-~~~~~~~~~d~lViAtG~~~~~~~ip 119 (409)
T 3h8l_A 80 KIDAKSSM-----VYYTKP-DGSMAEEEYDYVIVGIGAHLATELVK 119 (409)
T ss_dssp EEETTTTE-----EEEECT-TSCEEEEECSEEEECCCCEECGGGSB
T ss_pred EEeCCCCE-----EEEccC-CcccceeeCCEEEECCCCCcCccCCC
Confidence 99877642 666552 22235689999999999998865443
No 246
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.23 E-value=2.8e-06 Score=77.39 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=69.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
...+|+|||+|..|+.+|..|++.|.+|+++++.. . + . ..+.+. ++..++.|++
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~----~-------------~---~---~~~~~~---~~~~~~~gv~ 211 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD----A-------------F---R---ASKIMQ---QRALSNPKID 211 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS----S-------------C---C---SCHHHH---HHHHTCTTEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC----c-------------C---C---ccHHHH---HHHHhCCCee
Confidence 35789999999999999999999999999999410 0 0 0 011221 2334567999
Q ss_pred EEEe-eEEEEEecCC--c---EEEEE--CC--eEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTE-TVSKVDFKSR--P---FKVFT--DS--KSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~--~---~~v~~--~~--~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+ ++.+++.+++ . +.+.. ++ .++.+|.||+|+|.+|+..-
T Consensus 212 i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 263 (333)
T 1vdc_A 212 VIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKF 263 (333)
T ss_dssp EECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG
T ss_pred EecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHH
Confidence 9988 7889987663 2 44443 23 46999999999999987653
No 247
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.22 E-value=5.3e-06 Score=74.02 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=68.1
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC----------cc---------hHHHHHHhccCC-CcEEEcCceeE
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF----------RA---------SKIMQNRALTNP-KIDVIWNSVVL 265 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~----------~~---------~~~~~~~~l~~~-gv~~~~~~~v~ 265 (382)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.. .. ...+ .+.+.+. +++++. .++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~-~~v~ 80 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEA-RRQIERYPTIHWVE-GRVT 80 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHH-HHHHTTCTTEEEEE-SCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHH-HHHHHhcCCeEEEE-eEEE
Confidence 47999999999999999999999999999964321 10 1222 2334444 788875 4899
Q ss_pred EEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhh
Q 016820 266 EAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKF 309 (382)
Q Consensus 266 ~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~ 309 (382)
.++.++++ ..+.. .++..+.+|.+++|+|.+|..+.
T Consensus 81 ~i~~~~~~-----~~v~~---~~g~~~~~d~vviAtG~~~~~~~ 116 (297)
T 3fbs_A 81 DAKGSFGE-----FIVEI---DGGRRETAGRLILAMGVTDELPE 116 (297)
T ss_dssp EEEEETTE-----EEEEE---TTSCEEEEEEEEECCCCEEECCC
T ss_pred EEEEcCCe-----EEEEE---CCCCEEEcCEEEECCCCCCCCCC
Confidence 99888753 34443 23357999999999999876543
No 248
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.21 E-value=2.8e-06 Score=80.53 Aligned_cols=90 Identities=20% Similarity=0.223 Sum_probs=67.6
Q ss_pred CcEEEEcCCchHHHHHHHHhhcC--CEEEEEEeCCCCcchH---HH-------------HHHhccCCCcEEEcCceeEEE
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYG--SKVYIIHRRDSFRASK---IM-------------QNRALTNPKIDVIWNSVVLEA 267 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g--~~v~~~~~~~~~~~~~---~~-------------~~~~l~~~gv~~~~~~~v~~i 267 (382)
|+|+|||+|..|+.+|..|.+.+ .+||++++.+.+.+.. .. .++++++.||+++.+ ++++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 68999999999999999999875 7899999887542110 00 123456679999865 79999
Q ss_pred EecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCC
Q 016820 268 YGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPA 306 (382)
Q Consensus 268 ~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~ 306 (382)
+++.. .|.+++ +.++++|.+++|||.++.
T Consensus 82 d~~~~-----~V~~~~-----g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DPDAN-----TVTTQS-----GKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ETTTT-----EEEETT-----CCEEECSEEEECCCCEEE
T ss_pred ECCCC-----EEEECC-----CCEEECCEEEEeCCCCcc
Confidence 98775 144432 357999999999998754
No 249
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.19 E-value=9e-06 Score=73.76 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=72.1
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc---------------------chH---HHHHHhccCCCcEEEcC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR---------------------ASK---IMQNRALTNPKIDVIWN 261 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~---------------------~~~---~~~~~~l~~~gv~~~~~ 261 (382)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ... ....+.+++.+++++.+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 579999999999999999999999999999976432 011 11234566779999999
Q ss_pred ceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCC---CCChh
Q 016820 262 SVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGH---EPATK 308 (382)
Q Consensus 262 ~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~---~p~~~ 308 (382)
+.+.+++..+++. +.+.. .++. +.+|.+++|+|. .|...
T Consensus 88 ~~v~~i~~~~~~~----~~v~~---~~g~-~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 88 QAVESVEKQADGV----FKLVT---NEET-HYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp CCEEEEEECTTSC----EEEEE---SSEE-EEEEEEEECCTTSCCEECCC
T ss_pred CEEEEEEECCCCc----EEEEE---CCCE-EEeCEEEECCCCCcCCCCCC
Confidence 9999999877532 44443 2333 999999999999 66544
No 250
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.18 E-value=3.4e-06 Score=77.02 Aligned_cols=97 Identities=18% Similarity=0.176 Sum_probs=69.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|+|||+|..|+++|..|++.|.+|+++++.. . + . ..+.+. .+..++.||+
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~----~----~---------~------~~~~~~---~~~~~~~gV~ 207 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD----E----F---------R------ASKIML---DRARNNDKIR 207 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS----S----C---------S------SCTTHH---HHHHHCTTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC----c----C---------C------ccHHHH---HHHhccCCcE
Confidence 35789999999999999999999999999999410 0 0 0 001111 1333567999
Q ss_pred EEEe-eEEEEEecCCc--EEEEE--CC--eEEEcCEEEEccCCCCcCCCC
Q 016820 137 IFTE-TVSKVDFKSRP--FKVFT--DS--KSVLADTVIVATGAVAKKLQF 179 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~--~~v~~--~~--~~~~~d~lvlA~G~~~~~~~~ 179 (382)
++.+ ++.+++.+++. +.+.. ++ .++.+|.||+|+|.+|+..-+
T Consensus 208 v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 208 FLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLV 257 (335)
T ss_dssp EECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTT
T ss_pred EEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHh
Confidence 9988 68889876532 44442 23 469999999999999876543
No 251
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.18 E-value=1.9e-06 Score=79.67 Aligned_cols=78 Identities=18% Similarity=0.146 Sum_probs=52.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCC-CCCCcceecCCCccc------CCCCCC--CC-ChHHHHHHH
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMAND-IAPGGQLTTTSDVEN------FPGFPQ--GI-LGGDLMDRC 126 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~-~~~gg~~~~~~~~~~------~~~~~~--~~-~~~~~~~~~ 126 (382)
..+||+|||||++|+++|+.|++.|++|+|+| +. ..+||++........ ..++.. +. .......++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE----~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~ 118 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILE----ANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLT 118 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEEC----SCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEe----ccccccCCceeeecccccccccccCCCcEEecCceeecchHHHH
Confidence 45799999999999999999999999999999 55 678887654321100 011100 00 012234567
Q ss_pred HHHHHHcCcEEE
Q 016820 127 RNQSLRFGTQIF 138 (382)
Q Consensus 127 ~~~~~~~gi~~~ 138 (382)
.++++++|+...
T Consensus 119 ~~~~~~lGl~~~ 130 (376)
T 2e1m_A 119 LALIDKLGLKRR 130 (376)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHcCCCcc
Confidence 777888887653
No 252
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.18 E-value=1e-06 Score=85.11 Aligned_cols=51 Identities=16% Similarity=0.225 Sum_probs=37.1
Q ss_pred HHHHHHHHHcCcEEEEe-eEEEEEecCCcEE-EEE-CCeEEEcCEEEEccCCCC
Q 016820 124 DRCRNQSLRFGTQIFTE-TVSKVDFKSRPFK-VFT-DSKSVLADTVIVATGAVA 174 (382)
Q Consensus 124 ~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~-v~~-~~~~~~~d~lvlA~G~~~ 174 (382)
+.+.+.+++.|.+++++ .|++|..+++.++ |.+ +++++.+|.||.+++...
T Consensus 225 ~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 225 QGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred HHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 33445566778999999 6999998888765 555 456799999999887643
No 253
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.17 E-value=2.2e-06 Score=86.15 Aligned_cols=98 Identities=13% Similarity=0.059 Sum_probs=71.6
Q ss_pred cccEEEEC--CcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 58 KTKVCIIG--SGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 58 ~~~vvIIG--aG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
.++|+||| +|..|+++|..|++.|.+|+++++. ..... ..........+.+.+++.|+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~----~~l~~----------------~~~~~~~~~~l~~~l~~~GV 582 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPG----AQVSS----------------WTNNTFEVNRIQRRLIENGV 582 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESS----SSTTG----------------GGGGGTCHHHHHHHHHHTTC
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecc----ccccc----------------ccccchhHHHHHHHHHHCCC
Confidence 45799999 9999999999999999999999931 01000 01112335566777788999
Q ss_pred EEEEe-eEEEEEecCCcEEEEE----CCeEEEcCEEEEccCCCCcCC
Q 016820 136 QIFTE-TVSKVDFKSRPFKVFT----DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~~~v~~----~~~~~~~d~lvlA~G~~~~~~ 177 (382)
+++.+ +|++++.++ ..+.. ++.++.+|.||+|+|.+|+..
T Consensus 583 ~i~~~~~V~~i~~~~--~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~ 627 (690)
T 3k30_A 583 ARVTDHAVVAVGAGG--VTVRDTYASIERELECDAVVMVTARLPREE 627 (690)
T ss_dssp EEEESEEEEEEETTE--EEEEETTTCCEEEEECSEEEEESCEEECCH
T ss_pred EEEcCcEEEEEECCe--EEEEEccCCeEEEEECCEEEECCCCCCChH
Confidence 99999 688887543 34432 234699999999999988653
No 254
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.16 E-value=6.1e-06 Score=74.42 Aligned_cols=162 Identities=15% Similarity=0.186 Sum_probs=103.3
Q ss_pred cEEEEcCCchHHHHHHHHhhc--CCEEEEEEeCCCCc----------------------------------------c--
Q 016820 207 PLAVIGGGDSAMEEANFLTKY--GSKVYIIHRRDSFR----------------------------------------A-- 242 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~--g~~v~~~~~~~~~~----------------------------------------~-- 242 (382)
+|+|||+|+.|+.+|..|.+. |.+|+++++.+... .
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~~ 146 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAA 146 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCHH
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcchH
Confidence 799999999999999999998 99999999865431 0
Q ss_pred --hHHHHHHhccCCCcEEEcCceeEEEEecC--C-c-eeeeeEEEEec---------cCCceEEEec-------------
Q 016820 243 --SKIMQNRALTNPKIDVIWNSVVLEAYGEG--D-K-KVLGGLKVKNL---------VTGQVSDLKV------------- 294 (382)
Q Consensus 243 --~~~~~~~~l~~~gv~~~~~~~v~~i~~~~--~-g-~~~~~v~~~~~---------~~~~~~~~~~------------- 294 (382)
...+.+++.+..|++++.++.+.++..++ + | ..+.++.+... ...++..+.+
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~ 226 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQ 226 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSST
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccc
Confidence 01122233344699999999999998764 2 2 14777776531 0113467899
Q ss_pred --CeEEEeeCCCCChh-hhcccc-cccCCC--------------ceeeCCCCCc-CCCCceEEecccCC-----chhhH-
Q 016820 295 --SGLFFAIGHEPATK-FVDGQL-DLHSDG--------------YIITKPGTTH-TSVPGVFAAGDVQD-----KKYRQ- 349 (382)
Q Consensus 295 --D~vi~~~G~~p~~~-~~~~~~-~~~~~g--------------~i~vd~~~~~-t~~~~vya~GD~~~-----~~~~~- 349 (382)
|.||.|||...... ++...+ .++..+ -..|+. +.. +-+|++|++|-... +....
T Consensus 227 ~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~r~g~~ 305 (326)
T 2gjc_A 227 KHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIH-SGAYAGVDNMYFAGMEVAELDGLNRMGPT 305 (326)
T ss_dssp TCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHH-CEECTTSTTEEECTHHHHHHHTCCBCCSC
T ss_pred cCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeec-CCCccccCCEEECChHHHHhcCCCCCChh
Confidence 99999999885432 222111 111111 011222 223 26899999999762 12222
Q ss_pred HHHHHhhHHHHHHHHHHHHH
Q 016820 350 AVTAAGTGCMAALEAEHYLQ 369 (382)
Q Consensus 350 ~~~a~~~g~~aa~~i~~~l~ 369 (382)
...-.-+|+.+|+.|.+.|.
T Consensus 306 fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 306 FGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHhh
Confidence 33455889999999998875
No 255
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.16 E-value=3.6e-06 Score=84.38 Aligned_cols=119 Identities=19% Similarity=0.275 Sum_probs=69.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec-c---cCCCC---CCCcc------ee-cCCC---cccCCCCCCCCCh
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG-W---MANDI---APGGQ------LT-TTSD---VENFPGFPQGILG 119 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~-~---~~~~~---~~gg~------~~-~~~~---~~~~~~~~~~~~~ 119 (382)
..++|+|||||+.|+++|..|++.|.+|+++-. + ..... ..+.. .. .... ....+........
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~ 572 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLG 572 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSC
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccc
Confidence 357899999999999999999999987764200 0 00000 00000 00 0000 0000000000112
Q ss_pred HHHHHHHHHHHHHcCcEEEEe-eEEEEEecCCcEEEEECC--eEEEcCEEEEccCCCCcCC
Q 016820 120 GDLMDRCRNQSLRFGTQIFTE-TVSKVDFKSRPFKVFTDS--KSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 120 ~~~~~~~~~~~~~~gi~~~~~-~v~~i~~~~~~~~v~~~~--~~~~~d~lvlA~G~~~~~~ 177 (382)
......+++.+++.||+++.+ ++..++. +.+.+..++ .++.+|.||+|+|.+|+..
T Consensus 573 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~ 631 (671)
T 1ps9_A 573 KTTGWIHRTTLLSRGVKMIPGVSYQKIDD--DGLHVVINGETQVLAVDNVVICAGQEPNRA 631 (671)
T ss_dssp TTTHHHHHHHHHHTTCEEECSCEEEEEET--TEEEEEETTEEEEECCSEEEECCCEEECCT
T ss_pred cccHHHHHHHHHhcCCEEEeCcEEEEEeC--CeEEEecCCeEEEEeCCEEEECCCccccHH
Confidence 234455667778889999998 6888874 345553455 4699999999999998653
No 256
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.14 E-value=5.5e-06 Score=74.73 Aligned_cols=95 Identities=12% Similarity=0.077 Sum_probs=59.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|+|||||+.|+++|..|++.|.+|+|+|+. +.+ ..... .......+.++.
T Consensus 144 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~--------------------~~~---~~~~~---~~~~~~~~~~~~ 197 (312)
T 4gcm_A 144 KNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRR--------------------DEL---RAQRI---LQDRAFKNDKID 197 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSS--------------------SSC---CSCHH---HHHHHHHCTTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecc--------------------ccc---Ccchh---HHHHHHHhcCcc
Confidence 3578999999999999999999999999999941 000 00111 112333445666
Q ss_pred EEEe-eEEEEEecCCcE---EEEE----CCeEEEcCEEEEccCCCCcCC
Q 016820 137 IFTE-TVSKVDFKSRPF---KVFT----DSKSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~---~v~~----~~~~~~~d~lvlA~G~~~~~~ 177 (382)
.... .+..+...+... .... +...+.+|.+++++|..|+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~ 246 (312)
T 4gcm_A 198 FIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTA 246 (312)
T ss_dssp EECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred eeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCch
Confidence 5544 233333222211 1111 224589999999999988765
No 257
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.13 E-value=5.6e-06 Score=74.62 Aligned_cols=97 Identities=12% Similarity=0.062 Sum_probs=63.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++++|||+|+.|+++|..|+++|.+|+++++.. ......+ ...+.....++.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~-----------------------~~~~~~~---~~~~~~~~~~~~ 204 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD-----------------------AFRASKT---MQERVLNHPKIE 204 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-----------------------SCCSCHH---HHHHHHTCTTEE
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc-----------------------cccccch---hhhhhhccccee
Confidence 34789999999999999999999999999999310 0011111 122333444666
Q ss_pred EEEe-eEEEEEecCCc---EEEEE----CCeEEEcCEEEEccCCCCcCCCC
Q 016820 137 IFTE-TVSKVDFKSRP---FKVFT----DSKSVLADTVIVATGAVAKKLQF 179 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~---~~v~~----~~~~~~~d~lvlA~G~~~~~~~~ 179 (382)
.+.. .+..+....+. +.+.. ++..+.+|.|++|+|..|+...+
T Consensus 205 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l 255 (314)
T 4a5l_A 205 VIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFL 255 (314)
T ss_dssp EECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG
T ss_pred eEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHh
Confidence 5555 45555544332 23332 23469999999999999987644
No 258
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.11 E-value=8.3e-06 Score=77.40 Aligned_cols=95 Identities=19% Similarity=0.260 Sum_probs=72.1
Q ss_pred CcEEEEcCCchHHHHHHHHhh---cCCEEEEEEeCCCCcchH-------------HH---HHHhccCCCcEEEcCceeEE
Q 016820 206 KPLAVIGGGDSAMEEANFLTK---YGSKVYIIHRRDSFRASK-------------IM---QNRALTNPKIDVIWNSVVLE 266 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~---~g~~v~~~~~~~~~~~~~-------------~~---~~~~l~~~gv~~~~~~~v~~ 266 (382)
++|+|||+|..|+.+|..|.+ .+.+|+++++.+.+.... .+ ..+.+++.||+++. .++..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999998 789999999888652110 00 12456678999984 68999
Q ss_pred EEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc
Q 016820 267 AYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD 311 (382)
Q Consensus 267 i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~ 311 (382)
++.++. .|.+.+ + .++.+|.+++|+|.+|+...+.
T Consensus 84 id~~~~-----~V~~~~---g--~~i~~d~lviAtG~~~~~~~ip 118 (437)
T 3sx6_A 84 IDAEAQ-----NITLAD---G--NTVHYDYLMIATGPKLAFENVP 118 (437)
T ss_dssp EETTTT-----EEEETT---S--CEEECSEEEECCCCEECGGGST
T ss_pred EEcCCC-----EEEECC---C--CEEECCEEEECCCCCcCcccCC
Confidence 988764 144432 3 5699999999999998866544
No 259
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.10 E-value=1.5e-05 Score=77.30 Aligned_cols=94 Identities=17% Similarity=0.132 Sum_probs=68.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHH-cCc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLR-FGT 135 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gi 135 (382)
..++|+|||+|..|+++|..|++.|.+|+++++. .. +. .. ..+.+.+.+ .||
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~----~~----------------l~---~~----~~l~~~l~~~~gV 406 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFA----PE----------------MK---AD----QVLQDKVRSLKNV 406 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSS----SS----------------CC---SC----HHHHHHHTTCTTE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeC----cc----------------cC---cC----HHHHHHHhcCCCc
Confidence 3578999999999999999999999999999931 00 00 01 234445555 599
Q ss_pred EEEEe-eEEEEEecCCcE---EEEE--CC--eEEEcCEEEEccCCCCcCC
Q 016820 136 QIFTE-TVSKVDFKSRPF---KVFT--DS--KSVLADTVIVATGAVAKKL 177 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~~---~v~~--~~--~~~~~d~lvlA~G~~~~~~ 177 (382)
+++.+ .++++..+++.+ .+.. ++ .++.+|.||+|+|..|+..
T Consensus 407 ~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~ 456 (521)
T 1hyu_A 407 DIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTH 456 (521)
T ss_dssp EEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCG
T ss_pred EEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCch
Confidence 99988 688888765443 3332 13 2589999999999988764
No 260
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.07 E-value=2e-05 Score=79.84 Aligned_cols=33 Identities=33% Similarity=0.408 Sum_probs=31.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..+||+|||||++|+++|..|++.|++|+|+|+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~ 367 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEA 367 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEec
Confidence 458999999999999999999999999999995
No 261
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.06 E-value=4.5e-06 Score=81.06 Aligned_cols=42 Identities=26% Similarity=0.367 Sum_probs=37.1
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTT 103 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 103 (382)
.+||+|||||++|+++|..|++.|++|+|+| +...+||.+..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE----~~~~~GGr~~t 45 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLE----ARDRVGGRTYT 45 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEEC----SSSSSBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEe----CCCCCCCceee
Confidence 4799999999999999999999999999999 55677887643
No 262
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.06 E-value=3.6e-06 Score=79.44 Aligned_cols=43 Identities=28% Similarity=0.500 Sum_probs=37.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcC-CCeEEEecccCCCCCCCcceec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAE-LKPILFEGWMANDIAPGGQLTT 103 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g-~~v~lie~~~~~~~~~gg~~~~ 103 (382)
.++||+|||||++|+++|+.|++.| ++|+|+| +...+||.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E----~~~~~GG~~~t 48 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILE----RTDHVGGKCHS 48 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEEC----SSSCSSTTCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEE----CCCCCCCcccc
Confidence 4579999999999999999999999 9999999 55677877654
No 263
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.06 E-value=2.8e-06 Score=82.45 Aligned_cols=40 Identities=33% Similarity=0.356 Sum_probs=34.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcC-CCeEEEecccCCCCCCCcc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAE-LKPILFEGWMANDIAPGGQ 100 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g-~~v~lie~~~~~~~~~gg~ 100 (382)
..+||+|||||++||+||+.|++.| ++|+|+|+ ...+||+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa----~~riGGr 47 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEA----RDRVGGR 47 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECS----SSSSBTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeC----CCCCCCc
Confidence 4579999999999999999999999 99999994 4445554
No 264
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.05 E-value=1.8e-05 Score=74.52 Aligned_cols=93 Identities=16% Similarity=0.217 Sum_probs=70.6
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc------------------------------------------
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA------------------------------------------ 242 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 242 (382)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+..
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 45899999999999999999999999999998764300
Q ss_pred ------------------------hHHH---HHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecC
Q 016820 243 ------------------------SKIM---QNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVS 295 (382)
Q Consensus 243 ------------------------~~~~---~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D 295 (382)
...+ +.+.+++.|++++.++++.++..++++ +.+.. .++ .+.+|
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-----~~V~~---~~g-~i~ad 177 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-----FRVTT---SAG-TVDAA 177 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-----EEEEE---TTE-EEEES
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-----EEEEE---CCc-EEEee
Confidence 0011 122344569999999999999887764 55554 333 79999
Q ss_pred eEEEeeCCCCC
Q 016820 296 GLFFAIGHEPA 306 (382)
Q Consensus 296 ~vi~~~G~~p~ 306 (382)
.||+|+|..+.
T Consensus 178 ~VIlAtG~~S~ 188 (417)
T 3v76_A 178 SLVVASGGKSI 188 (417)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999999863
No 265
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.05 E-value=7.1e-06 Score=76.88 Aligned_cols=96 Identities=16% Similarity=0.242 Sum_probs=69.3
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcC--CEEEEEEeCCCCc---chHHHH------------HHhccCCCcEEEcCceeEEE
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYG--SKVYIIHRRDSFR---ASKIMQ------------NRALTNPKIDVIWNSVVLEA 267 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g--~~v~~~~~~~~~~---~~~~~~------------~~~l~~~gv~~~~~~~v~~i 267 (382)
+|+|+|||+|+.|+.+|..|.+.+ .+|+++++++.+. ...... .+.+.+.||+++.+ ++..|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 689999999999999999998876 5899999877531 111000 01233468998854 78899
Q ss_pred EecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhhc
Q 016820 268 YGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFVD 311 (382)
Q Consensus 268 ~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~ 311 (382)
+++..- +.+. ++.++.+|.+++|+|.+++.....
T Consensus 81 d~~~~~-----v~~~-----~g~~i~yd~LviAtG~~~~~~~i~ 114 (401)
T 3vrd_B 81 DPDKKL-----VKTA-----GGAEFAYDRCVVAPGIDLLYDKIE 114 (401)
T ss_dssp ETTTTE-----EEET-----TSCEEECSEEEECCCEEECGGGSB
T ss_pred EccCcE-----EEec-----ccceeecceeeeccCCccccCCcc
Confidence 887751 3332 336799999999999998776544
No 266
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.01 E-value=3.6e-05 Score=73.59 Aligned_cols=135 Identities=13% Similarity=0.207 Sum_probs=83.7
Q ss_pred CcEEEEcCCchHHHHHHHHhh---cCCE---EEEEEeCCCCc--------------------------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTK---YGSK---VYIIHRRDSFR-------------------------------------- 241 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~---~g~~---v~~~~~~~~~~-------------------------------------- 241 (382)
++|+|||+|+.|+.+|..|.+ .|.+ |+++++.+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 8998 99999875320
Q ss_pred ----------------chHHH---HHHhccCCCcE--EEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEe
Q 016820 242 ----------------ASKIM---QNRALTNPKID--VIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFA 300 (382)
Q Consensus 242 ----------------~~~~~---~~~~l~~~gv~--~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~ 300 (382)
....+ +++.+++.|++ ++.++.|..++..+++. ...|.+.+..++....+.+|.||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~-~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQ-TFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTT-EEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCC-cEEEEEEEcCCCceEEEEcCEEEEC
Confidence 00111 12233445777 88899999998866421 1235555422233367899999999
Q ss_pred eC--CCCChhhhcccccccCCCceeeCCCCCc---CCCCceEEecccC
Q 016820 301 IG--HEPATKFVDGQLDLHSDGYIITKPGTTH---TSVPGVFAAGDVQ 343 (382)
Q Consensus 301 ~G--~~p~~~~~~~~~~~~~~g~i~vd~~~~~---t~~~~vya~GD~~ 343 (382)
+| .+|..+.+. ++.. -.|.+........ ...++|-++|-..
T Consensus 162 tG~~s~p~~p~ip-G~~~-~~g~~~hs~~~~~~~~~~~k~VvVVG~G~ 207 (464)
T 2xve_A 162 TGHFSTPYVPEFE-GFEK-FGGRILHAHDFRDALEFKDKTVLLVGSSY 207 (464)
T ss_dssp CCSSSSBCCCCCB-TTTT-CCSEEEEGGGCCCGGGGTTSEEEEECCST
T ss_pred CCCCCCCccCCCC-Cccc-CCceEEehhhhCCHhHcCCCEEEEEcCCC
Confidence 99 677655333 3221 0222221111111 1346788888654
No 267
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.00 E-value=5.7e-06 Score=78.92 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=38.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTT 103 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 103 (382)
..+||+|||||++|+++|..|++.|++|+|+| +...+||.+..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE----~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHID----KQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEe----CCCCCCccccc
Confidence 35899999999999999999999999999999 66788887654
No 268
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.99 E-value=4.8e-06 Score=79.30 Aligned_cols=42 Identities=31% Similarity=0.434 Sum_probs=36.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT 102 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~ 102 (382)
..+||+|||||++|+++|..|++.|++|+|+| +...+||.+.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E----~~~~~GG~~~ 45 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIE----ARDRVGGRTW 45 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEE----CCCCCCCcee
Confidence 45799999999999999999999999999999 4556677653
No 269
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.98 E-value=1.2e-05 Score=75.99 Aligned_cols=92 Identities=21% Similarity=0.242 Sum_probs=68.9
Q ss_pred CcEEEEcCCchHHHHHHHHhh--cCCEEEEEEeCCCCcchHHH----------------HHHhccCCCcEEEcCceeEEE
Q 016820 206 KPLAVIGGGDSAMEEANFLTK--YGSKVYIIHRRDSFRASKIM----------------QNRALTNPKIDVIWNSVVLEA 267 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~--~g~~v~~~~~~~~~~~~~~~----------------~~~~l~~~gv~~~~~~~v~~i 267 (382)
++|+|||+|..|+.+|..|.+ .+.+|+++++.+.+.....+ ..+.+++.|++++. ..+..+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~-~~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFIN-EKAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEEC-SCEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEE-EEEEEE
Confidence 589999999999999999999 67999999998765221100 12345567999986 489999
Q ss_pred EecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChh
Q 016820 268 YGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATK 308 (382)
Q Consensus 268 ~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~ 308 (382)
+++.. .+.+.+ + .++.+|.+++|+|.+|+.+
T Consensus 82 d~~~~-----~v~~~~---g--~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPDAN-----TVTTQS---G--KKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETTTT-----EEEETT---C--CEEECSEEEECCCCEEECC
T ss_pred ECCCC-----EEEECC---C--cEEECCEEEEcCCcccccC
Confidence 87764 144332 3 5689999999999997654
No 270
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.97 E-value=1.6e-05 Score=77.23 Aligned_cols=95 Identities=20% Similarity=0.305 Sum_probs=71.3
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc-----------------------------------------c-
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR-----------------------------------------A- 242 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------------~- 242 (382)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4789999999999999999999999999999874320 0
Q ss_pred --------------------------------hHHH---HHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCC
Q 016820 243 --------------------------------SKIM---QNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTG 287 (382)
Q Consensus 243 --------------------------------~~~~---~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~ 287 (382)
...+ +.+.+++.|++++.+++++++..++++ +..|.+.+ +
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~--v~gV~l~~---G 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQ--ITGVTLSN---G 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSB--EEEEEETT---S
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCE--EEEEEECC---C
Confidence 0011 123345579999999999999887653 33444432 3
Q ss_pred ceEEEecCeEEEeeCCCCC
Q 016820 288 QVSDLKVSGLFFAIGHEPA 306 (382)
Q Consensus 288 ~~~~~~~D~vi~~~G~~p~ 306 (382)
..+.+|.||+|+|..+.
T Consensus 262 --~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 262 --EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp --CEEECSCEEECCCTTCH
T ss_pred --CEEECCEEEECCCCChh
Confidence 57999999999999985
No 271
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.96 E-value=6.6e-06 Score=77.11 Aligned_cols=42 Identities=21% Similarity=0.286 Sum_probs=37.8
Q ss_pred cccEEEECCcHHHHHHHHHHHHc-CCCeEEEecccCCCCCCCcceec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARA-ELKPILFEGWMANDIAPGGQLTT 103 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~-g~~v~lie~~~~~~~~~gg~~~~ 103 (382)
.+||+|||||++|+++|+.|++. |++|+|+| +...+||.+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E----~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLE----RRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEEC----SSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEe----CCCCCCCeeee
Confidence 58999999999999999999999 99999999 56678887654
No 272
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.96 E-value=5.5e-06 Score=79.48 Aligned_cols=46 Identities=20% Similarity=0.269 Sum_probs=35.2
Q ss_pred ccccccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee
Q 016820 53 EIQTLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT 102 (382)
Q Consensus 53 ~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~ 102 (382)
|+....+||+|||||++|+++|+.|++.|++|+|+| +...+||.+.
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E----~~~~~GGr~~ 56 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLE----SSARLGGAVG 56 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTTTCCEEEEC----SSSSSBTTCC
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEE----cCCCCCceee
Confidence 344456899999999999999999999999999999 4556666543
No 273
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.93 E-value=2.1e-05 Score=81.87 Aligned_cols=88 Identities=15% Similarity=0.105 Sum_probs=66.8
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcEEE
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIF 138 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~ 138 (382)
++|+|||+|+.|+++|..|++.|.+|+|+|+.. . +.. . .+.+++.||+++
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~--------------------~----~~~-~-----~~~l~~~GV~v~ 334 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS--------------------S----ISA-A-----AAQAVADGVQVI 334 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS--------------------S----CCH-H-----HHHHHHTTCCEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC--------------------c----cch-h-----HHHHHhCCeEEE
Confidence 689999999999999999999999999999310 0 011 1 345678899999
Q ss_pred Ee-eEEEEEec--CC--cEEEEE------CC--eEEEcCEEEEccCCCCcC
Q 016820 139 TE-TVSKVDFK--SR--PFKVFT------DS--KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 139 ~~-~v~~i~~~--~~--~~~v~~------~~--~~~~~d~lvlA~G~~~~~ 176 (382)
.+ .+.++..+ ++ .+.+.. ++ .++.+|.||+|+|.+|+.
T Consensus 335 ~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 335 SGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp ETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECC
T ss_pred eCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcCh
Confidence 99 68889873 32 344443 12 469999999999998865
No 274
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.93 E-value=4.6e-05 Score=68.41 Aligned_cols=97 Identities=13% Similarity=0.226 Sum_probs=64.0
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC----------Cc-----c----hHHHHHHhccCCCcEEEcCceeEE
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS----------FR-----A----SKIMQNRALTNPKIDVIWNSVVLE 266 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~----------~~-----~----~~~~~~~~l~~~gv~~~~~~~v~~ 266 (382)
-.|+|||+|+.|+..|..+.+.|.+|+++++... +. . .....++..+..++.++ ...+..
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 85 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYY-EKTVVM 85 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEE-ECCEEE
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEE-eeEEEE
Confidence 3699999999999999999999999999987532 10 0 11122233333455555 445556
Q ss_pred EEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhhh
Q 016820 267 AYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKFV 310 (382)
Q Consensus 267 i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~~ 310 (382)
+...+.+. .++.. .++.++.+|.+|+|||.+|..+.+
T Consensus 86 ~~~~~~~~----~~v~~---~~g~~~~a~~liiATGs~p~~p~i 122 (304)
T 4fk1_A 86 ITKQSTGL----FEIVT---KDHTKYLAERVLLATGMQEEFPSI 122 (304)
T ss_dssp EEECTTSC----EEEEE---TTCCEEEEEEEEECCCCEEECCSC
T ss_pred eeecCCCc----EEEEE---CCCCEEEeCEEEEccCCccccccc
Confidence 65544432 33433 334679999999999998765433
No 275
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.92 E-value=9.2e-06 Score=75.66 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=38.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTT 103 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 103 (382)
..+||+|||||++|+++|+.|++.|.+|+|+| +...+||.+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E----~~~~~GG~~~~ 70 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVD----RRPHIGGNAYD 70 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSSGGGCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEe----ccCCCCCccce
Confidence 46899999999999999999999999999999 55677887764
No 276
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.90 E-value=9.1e-06 Score=78.25 Aligned_cols=41 Identities=29% Similarity=0.502 Sum_probs=36.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcce
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQL 101 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~ 101 (382)
..+||+|||||++|+++|+.|++.|++|+|+| +...+||.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E----~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLE----ARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEEC----SSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEe----ccCCCCCce
Confidence 45799999999999999999999999999999 555677764
No 277
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.90 E-value=5.5e-05 Score=73.76 Aligned_cols=97 Identities=13% Similarity=0.161 Sum_probs=69.1
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc---------------------------------------chH--
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR---------------------------------------ASK-- 244 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~---------------------------------------~~~-- 244 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ...
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 579999999999999999999999999999865321 000
Q ss_pred -HHHHHhccCCCc--EEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeC--CCCChh
Q 016820 245 -IMQNRALTNPKI--DVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIG--HEPATK 308 (382)
Q Consensus 245 -~~~~~~l~~~gv--~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G--~~p~~~ 308 (382)
...++..++.++ +++.++++.+++.++++. . +.+.. .++.++.+|.+|+|+| .+|..+
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~-~--w~V~~---~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGL-R--WTVRT---DRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTT-E--EEEEE---TTCCEEEEEEEEECCCSEEECCCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCC-E--EEEEE---CCCCEEEeCEEEECcCCCCCCCCC
Confidence 111233455676 788899999998766531 1 33433 2335699999999999 555544
No 278
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.88 E-value=0.00011 Score=69.92 Aligned_cols=101 Identities=20% Similarity=0.142 Sum_probs=69.9
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCC--EEEEEEeCCCCc----c------------------------------------
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGS--KVYIIHRRDSFR----A------------------------------------ 242 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~--~v~~~~~~~~~~----~------------------------------------ 242 (382)
.++|+|||+|+.|+.+|..|.+.|. +|+++++.+.+. .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4689999999999999999999999 999999864220 0
Q ss_pred ----------------------------hH---HHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCc-eE
Q 016820 243 ----------------------------SK---IMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQ-VS 290 (382)
Q Consensus 243 ----------------------------~~---~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~-~~ 290 (382)
.. ..+++..++.+..++++++|..++..+++ ..|++.+..+++ ..
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~---~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS---WVVTYKGTKAGSPIS 162 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE---EEEEEEESSTTCCEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe---EEEEEeecCCCCeeE
Confidence 00 01122233346678889999999887653 234444322232 23
Q ss_pred EEecCeEEEeeCC--CCChh
Q 016820 291 DLKVSGLFFAIGH--EPATK 308 (382)
Q Consensus 291 ~~~~D~vi~~~G~--~p~~~ 308 (382)
.+.+|.||+|+|. .|+.+
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp EEEESEEEECCCSSSSBCBC
T ss_pred EEEeCEEEECCCCCCCCCCC
Confidence 7899999999999 66544
No 279
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.88 E-value=7.3e-06 Score=77.62 Aligned_cols=34 Identities=15% Similarity=0.453 Sum_probs=30.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~ 90 (382)
+++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCC
Confidence 4579999999999999999999999999999974
No 280
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.85 E-value=1.1e-05 Score=77.70 Aligned_cols=41 Identities=29% Similarity=0.277 Sum_probs=36.3
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT 102 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~ 102 (382)
.+||+|||||++|+++|..|++.|++|+|+| +...+||++.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E----~~~~~GGr~~ 79 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLE----ARDRIGGRSW 79 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEEC----SSSBSBTTCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEe----CCCCCCCcce
Confidence 3799999999999999999999999999999 5567777654
No 281
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.84 E-value=1.3e-05 Score=74.19 Aligned_cols=41 Identities=24% Similarity=0.232 Sum_probs=36.1
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTT 103 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 103 (382)
+||+|||||++|+++|..|++.|++|+|+| +...+||.+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E----~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIE----KRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEEC----SSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEe----cCCCCCcceEe
Confidence 689999999999999999999999999999 55567777543
No 282
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.83 E-value=1.7e-05 Score=76.30 Aligned_cols=44 Identities=32% Similarity=0.462 Sum_probs=38.2
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcC-CCeEEEecccCCCCCCCcceec
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAE-LKPILFEGWMANDIAPGGQLTT 103 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g-~~v~lie~~~~~~~~~gg~~~~ 103 (382)
...+||+|||||++|+++|+.|++.| .+|+|+| +...+||.+..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E----~~~~~GG~~~~ 51 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYE----CNDTPGGLSRS 51 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEE----SSSSSSGGGCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEe----CCCCCCCeeee
Confidence 34689999999999999999999998 8999999 55677887664
No 283
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.83 E-value=9.3e-06 Score=82.05 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=68.1
Q ss_pred cccEEEEC--CcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 58 KTKVCIIG--SGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 58 ~~~vvIIG--aG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
.++|+||| ||..|+.+|..|++.|.+|+++++. . ..... .++ . ....+.+.+++.||
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~----~-l~~~~----------~~~--~----~~~~~~~~l~~~GV 586 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGV----H-LANYM----------HFT--L----EYPNMMRRLHELHV 586 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESS----C-TTHHH----------HHT--T----CHHHHHHHHHHTTC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEecc----c-ccccc----------ccc--c----cHHHHHHHHHhCCC
Confidence 46899998 9999999999999999999999931 0 00000 000 0 12455666678899
Q ss_pred EEEEe-eEEEEEecCCcEEEEE---CC-eE------------------EEcCEEEEccCCCCcCC
Q 016820 136 QIFTE-TVSKVDFKSRPFKVFT---DS-KS------------------VLADTVIVATGAVAKKL 177 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~~~~v~~---~~-~~------------------~~~d~lvlA~G~~~~~~ 177 (382)
+++.+ ++.+|+.+ .+.+.. ++ .. +.+|.||+|+|..|+..
T Consensus 587 ~i~~~~~v~~i~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~ 649 (729)
T 1o94_A 587 EELGDHFCSRIEPG--RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECT 649 (729)
T ss_dssp EEECSEEEEEEETT--EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCH
T ss_pred EEEcCcEEEEEECC--eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChH
Confidence 99998 68888743 344432 22 22 89999999999988754
No 284
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.83 E-value=1.3e-05 Score=74.00 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=31.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~ 90 (382)
..+||+|||||++|+++|++|++.|++|+|+|+.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 4579999999999999999999999999999964
No 285
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.83 E-value=1.8e-05 Score=75.40 Aligned_cols=95 Identities=19% Similarity=0.172 Sum_probs=61.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCC-eEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELK-PILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGT 135 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~-v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 135 (382)
..++|+|||||..|+.+|..+.++|.+ |+++++. ....+|.. ..+ .+.+.+.|+
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~---------------~~~~~p~~-----~~e-----~~~~~~~Gv 317 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRR---------------DRKNMPGS-----QRE-----VAHAEEEGV 317 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS---------------CSTTCSSC-----HHH-----HHHHHHTTC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeC---------------CccCCCCC-----HHH-----HHHHHHCCC
Confidence 457899999999999999999999985 9999841 00011211 122 234566799
Q ss_pred EEEEe-eEEEEEecCC--cEEEE-------------------ECCeEEEcCEEEEccCCCCcC
Q 016820 136 QIFTE-TVSKVDFKSR--PFKVF-------------------TDSKSVLADTVIVATGAVAKK 176 (382)
Q Consensus 136 ~~~~~-~v~~i~~~~~--~~~v~-------------------~~~~~~~~d~lvlA~G~~~~~ 176 (382)
+++.+ .+.++..+++ .+.+. .+..++.+|.||+|+|..|+.
T Consensus 318 ~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~ 380 (456)
T 2vdc_G 318 EFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPED 380 (456)
T ss_dssp EEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCC
T ss_pred EEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCc
Confidence 98776 4545543211 11111 112358999999999998864
No 286
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.82 E-value=7.8e-05 Score=69.74 Aligned_cols=93 Identities=15% Similarity=0.169 Sum_probs=69.1
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc------------------c-------------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR------------------A------------------------- 242 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~------------------~------------------------- 242 (382)
.+|+|||+|..|+.+|..+.+.|.+|+++++.+.+. .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 469999999999999999999999999999876430 0
Q ss_pred -----------------------hH---HHHHHhccCCCcEEEcCceeEEEEec----CCceeeeeEEEEeccCCceEEE
Q 016820 243 -----------------------SK---IMQNRALTNPKIDVIWNSVVLEAYGE----GDKKVLGGLKVKNLVTGQVSDL 292 (382)
Q Consensus 243 -----------------------~~---~~~~~~l~~~gv~~~~~~~v~~i~~~----~~g~~~~~v~~~~~~~~~~~~~ 292 (382)
.. ..+.+.+++.|++++.++.+.++..+ +++ +.+.. .++ .+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-----~~v~~---~~g-~i 155 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-----FVLQV---NST-QW 155 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-----EEEEE---TTE-EE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-----EEEEE---CCC-EE
Confidence 00 01122344578999999999999866 332 44544 233 69
Q ss_pred ecCeEEEeeCCCCCh
Q 016820 293 KVSGLFFAIGHEPAT 307 (382)
Q Consensus 293 ~~D~vi~~~G~~p~~ 307 (382)
.+|.||+|+|..+.+
T Consensus 156 ~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 156 QCKNLIVATGGLSMP 170 (401)
T ss_dssp EESEEEECCCCSSCG
T ss_pred ECCEEEECCCCccCC
Confidence 999999999999843
No 287
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.82 E-value=1.3e-05 Score=76.83 Aligned_cols=40 Identities=35% Similarity=0.524 Sum_probs=34.4
Q ss_pred cccEEEECCcHHHHHHHHHHHHcC--CCeEEEecccCCCCCCCcce
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAE--LKPILFEGWMANDIAPGGQL 101 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~~~~~gg~~ 101 (382)
.+||+|||||++|+++|+.|++.| ++|+|+|+ ...+||.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~----~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEA----GERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECS----SSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEEC----CCCCCcee
Confidence 479999999999999999999999 99999994 44555543
No 288
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.82 E-value=6.3e-05 Score=69.77 Aligned_cols=91 Identities=21% Similarity=0.171 Sum_probs=68.0
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc--------------------h---------------------
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA--------------------S--------------------- 243 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~--------------------~--------------------- 243 (382)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 46899999999999999999999999999998765410 0
Q ss_pred -------------------HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 244 -------------------KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 244 -------------------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
...+.+.+.+.|++++.++++.+++. + + .|++.+ + .++.+|.||.|+|..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~----~v~~~~---g--~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-G----RLTLQT---G--EVLEADLIVGADGVG 159 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T----EEEETT---S--CEEECSEEEECCCTT
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C----EEEECC---C--CEEEcCEEEECCCcc
Confidence 11112334456899999999999987 2 2 254432 3 468999999999987
Q ss_pred CC
Q 016820 305 PA 306 (382)
Q Consensus 305 p~ 306 (382)
+.
T Consensus 160 s~ 161 (379)
T 3alj_A 160 SK 161 (379)
T ss_dssp CH
T ss_pred HH
Confidence 64
No 289
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.80 E-value=9.5e-05 Score=69.05 Aligned_cols=93 Identities=12% Similarity=0.134 Sum_probs=67.9
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc--------------------ch----------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR--------------------AS---------------------- 243 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~--------------------~~---------------------- 243 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 479999999999999999999999999998765430 00
Q ss_pred -----------------------HHHHHHhccCC-CcEEEcCceeEEEEecCCceeeeeE--EEEeccCCceEEEecCeE
Q 016820 244 -----------------------KIMQNRALTNP-KIDVIWNSVVLEAYGEGDKKVLGGL--KVKNLVTGQVSDLKVSGL 297 (382)
Q Consensus 244 -----------------------~~~~~~~l~~~-gv~~~~~~~v~~i~~~~~g~~~~~v--~~~~~~~~~~~~~~~D~v 297 (382)
...+.+.+++. |++++.++++.+++.++++ + .+.. .++..+.+|.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-----v~g~v~~---~~g~~~~ad~v 158 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-----AIDQVRL---NDGRVLRPRVV 158 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-----CEEEEEE---TTSCEEEEEEE
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-----eEEEEEE---CCCCEEECCEE
Confidence 00011223444 8999999999999987764 3 3433 12247899999
Q ss_pred EEeeCCCCC
Q 016820 298 FFAIGHEPA 306 (382)
Q Consensus 298 i~~~G~~p~ 306 (382)
|.|+|..+.
T Consensus 159 V~AdG~~s~ 167 (399)
T 2x3n_A 159 VGADGIASY 167 (399)
T ss_dssp EECCCTTCH
T ss_pred EECCCCChH
Confidence 999998653
No 290
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.78 E-value=1.8e-05 Score=73.71 Aligned_cols=42 Identities=17% Similarity=0.197 Sum_probs=36.9
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTT 103 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 103 (382)
.+||+|||||++|+++|..|++.|++|+|+| +...+||.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E----~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIID----QRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEE----SSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEE----ecCCcCCcccc
Confidence 3699999999999999999999999999999 55677877643
No 291
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.78 E-value=0.00012 Score=72.03 Aligned_cols=98 Identities=20% Similarity=0.142 Sum_probs=71.2
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc-------------------c-----------------------
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR-------------------A----------------------- 242 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~-------------------~----------------------- 242 (382)
..+|+|||+|..|+-+|..|++.|.+|+++++.+... .
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 4689999999999999999999999999999873210 0
Q ss_pred -----------------------h----HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecC
Q 016820 243 -----------------------S----KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVS 295 (382)
Q Consensus 243 -----------------------~----~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D 295 (382)
. ...+.+.+++.|++++.++++.++..++++ ...|.+.+ .+....+.+|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~--~~~V~~~~--~G~~~~i~Ad 178 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPD--RVVLTVRR--GGESVTVESD 178 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTT--CEEEEEEE--TTEEEEEEES
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC--EEEEEEec--CCceEEEEcC
Confidence 0 001122344579999999999999876332 33455553 2444679999
Q ss_pred eEEEeeCCCCC
Q 016820 296 GLFFAIGHEPA 306 (382)
Q Consensus 296 ~vi~~~G~~p~ 306 (382)
.||.|+|....
T Consensus 179 lVV~AdG~~S~ 189 (591)
T 3i3l_A 179 FVIDAGGSGGP 189 (591)
T ss_dssp EEEECCGGGCH
T ss_pred EEEECCCCcch
Confidence 99999998763
No 292
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.77 E-value=1.7e-05 Score=76.59 Aligned_cols=41 Identities=29% Similarity=0.438 Sum_probs=36.3
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT 102 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~ 102 (382)
.+||+|||||++|+++|+.|++.|++|+|+| +...+||.+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E----~~~~~GG~~~ 53 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFE----AEGKAGGKLR 53 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEEC----SSSSSCSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEE----eCCCCCCcee
Confidence 5799999999999999999999999999999 5566777653
No 293
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.76 E-value=9.8e-05 Score=67.04 Aligned_cols=90 Identities=18% Similarity=0.293 Sum_probs=64.7
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc----------------------chH---HHHH------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR----------------------ASK---IMQN------------ 248 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~----------------------~~~---~~~~------------ 248 (382)
.+|+|||+|.+|+.+|..|.+.|.+|+++++.+... ... .+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 479999999999999999999999999999876430 000 0000
Q ss_pred -------------------------------HhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEE-ecCe
Q 016820 249 -------------------------------RALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDL-KVSG 296 (382)
Q Consensus 249 -------------------------------~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~-~~D~ 296 (382)
+.+. .|+++++++++.+++.++++ +.+.. .++..+ .+|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~-----~~v~~---~~g~~~~~a~~ 153 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEH-----WNLLD---AEGQNHGPFSH 153 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSC-----EEEEE---TTSCEEEEESE
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCE-----EEEEe---CCCcCccccCE
Confidence 0111 27899999999999988765 55554 222334 5899
Q ss_pred EEEeeCCC
Q 016820 297 LFFAIGHE 304 (382)
Q Consensus 297 vi~~~G~~ 304 (382)
||.|+|..
T Consensus 154 vV~a~g~~ 161 (336)
T 1yvv_A 154 VIIATPAP 161 (336)
T ss_dssp EEECSCHH
T ss_pred EEEcCCHH
Confidence 99999865
No 294
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.75 E-value=2e-05 Score=76.05 Aligned_cols=42 Identities=31% Similarity=0.415 Sum_probs=36.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT 102 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~ 102 (382)
.++||+|||||++|+++|..|++.|++|+|+| ....+||.+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE----~~~~~gg~~~ 73 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLE----ASERPGGRVR 73 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEEC----SSSSSBTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEE----CCCCCCCcee
Confidence 35799999999999999999999999999999 4556777653
No 295
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.75 E-value=0.00015 Score=70.21 Aligned_cols=97 Identities=25% Similarity=0.291 Sum_probs=71.3
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc--------------------ch----------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR--------------------AS---------------------- 243 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~--------------------~~---------------------- 243 (382)
.+|+|||+|..|+-+|..|.+.|.+|+++++.+... ..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 479999999999999999999999999999876210 00
Q ss_pred --------------------------HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeE
Q 016820 244 --------------------------KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGL 297 (382)
Q Consensus 244 --------------------------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~v 297 (382)
...+.+.+.+.|++++.++++.++..+++. +.++.+.. .+++...+.+|+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~--v~gv~~~~-~dG~~~~i~ad~V 164 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGER--AVGVRYRN-TEGVELMAHARFI 164 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTE--EEEEEEEC-SSSCEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCE--EEEEEEEe-CCCCEEEEEcCEE
Confidence 001112334479999999999999987653 44566654 2233357999999
Q ss_pred EEeeCCCC
Q 016820 298 FFAIGHEP 305 (382)
Q Consensus 298 i~~~G~~p 305 (382)
|.|+|...
T Consensus 165 I~AdG~~S 172 (512)
T 3e1t_A 165 VDASGNRT 172 (512)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999975
No 296
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.72 E-value=0.00012 Score=71.34 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=69.0
Q ss_pred CcEEEEcCCchHHHHHHHHh-hcCCEEEEEEeCCCCcc---------------------------------------h--
Q 016820 206 KPLAVIGGGDSAMEEANFLT-KYGSKVYIIHRRDSFRA---------------------------------------S-- 243 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~-~~g~~v~~~~~~~~~~~---------------------------------------~-- 243 (382)
.+|+|||+|..|+.+|..|. +.|.+|+++++.+.+.. .
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 99999999998653310 0
Q ss_pred -HHHHHHhccCCCc--EEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCC--CCChh
Q 016820 244 -KIMQNRALTNPKI--DVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGH--EPATK 308 (382)
Q Consensus 244 -~~~~~~~l~~~gv--~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~--~p~~~ 308 (382)
....++..++.|+ +++.++++.+++.++++. . +.+.. .++..+.+|.+|+|+|. +|..+
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~-~--~~V~~---~~G~~i~ad~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDEN-L--WEVTT---DHGEVYRAKYVVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTT-E--EEEEE---TTSCEEEEEEEEECCCSCCSBCCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCC-E--EEEEE---cCCCEEEeCEEEECCcccccCCCC
Confidence 0111234455677 788899999998876521 1 33443 22357899999999995 55443
No 297
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.72 E-value=0.00015 Score=67.67 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=67.1
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC-c-------ch---HHHHHH------------------------
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF-R-------AS---KIMQNR------------------------ 249 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~-~-------~~---~~~~~~------------------------ 249 (382)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.. . .. ...+++
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653 0 00 011111
Q ss_pred -------------------hccC--CCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCC
Q 016820 250 -------------------ALTN--PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPA 306 (382)
Q Consensus 250 -------------------~l~~--~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~ 306 (382)
.|.+ .++++++++++.+++.++++ +.+.. .++..+.+|+||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-----v~v~~---~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET-----VQMRF---SDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-----EEEEE---TTSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-----EEEEE---CCCCEEECCEEEECCCcchh
Confidence 0100 26788889999999887664 44444 22356899999999998643
No 298
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.72 E-value=0.0001 Score=70.26 Aligned_cols=32 Identities=16% Similarity=0.176 Sum_probs=28.7
Q ss_pred cccEEEECCcHHHHHHHHHHH--------------------HcCC-CeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAA--------------------RAEL-KPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~--------------------~~g~-~v~lie~ 89 (382)
.++|+|||+|..|+.+|..|+ +.|. +|+|+++
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r 197 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGR 197 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEc
Confidence 578999999999999999999 5687 6999984
No 299
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.72 E-value=0.00011 Score=68.26 Aligned_cols=96 Identities=24% Similarity=0.374 Sum_probs=70.5
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc----------------------------------------h--
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA----------------------------------------S-- 243 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~----------------------------------------~-- 243 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+.+.. .
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 3699999999999999999999999999998764300 0
Q ss_pred --------------------HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCC
Q 016820 244 --------------------KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGH 303 (382)
Q Consensus 244 --------------------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~ 303 (382)
...+.+.+++.|++++.++++.++..++++ +.+|.+.. .+++..+.+|.||.|+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~--v~gv~~~~--~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGK--VAGAKIRH--NNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTE--EEEEEEEE--TTEEEEEEEEEEEECCCT
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCE--EEEEEEEE--CCeEEEEEcCEEEECCCc
Confidence 001112233468999999999999887653 44455543 244578999999999997
Q ss_pred CC
Q 016820 304 EP 305 (382)
Q Consensus 304 ~p 305 (382)
..
T Consensus 161 ~s 162 (397)
T 3cgv_A 161 ES 162 (397)
T ss_dssp TC
T ss_pred ch
Confidence 64
No 300
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.71 E-value=0.00013 Score=71.10 Aligned_cols=97 Identities=21% Similarity=0.185 Sum_probs=66.1
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc---------------------------------------chH--
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR---------------------------------------ASK-- 244 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~---------------------------------------~~~-- 244 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ...
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 579999999999999999999999999999875420 001
Q ss_pred -HHHHHhccCCCc--EEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeC--CCCChh
Q 016820 245 -IMQNRALTNPKI--DVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIG--HEPATK 308 (382)
Q Consensus 245 -~~~~~~l~~~gv--~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G--~~p~~~ 308 (382)
...++..++.++ .++.++++.+++.++++. . ..+.. .++..+.+|.+|+|+| .+|..+
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~--w~V~~---~~G~~~~ad~lV~AtG~~s~p~~p 152 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDR-L--WEVTL---DNEEVVTCRFLISATGPLSASRMP 152 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGT-E--EEEEE---TTTEEEEEEEEEECCCSCBC---C
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCC-E--EEEEE---CCCCEEEeCEEEECcCCCCCCcCC
Confidence 111233344455 678899999998765421 1 33433 2336799999999999 566544
No 301
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.71 E-value=0.0002 Score=68.15 Aligned_cols=98 Identities=16% Similarity=0.158 Sum_probs=70.3
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---------h---------------------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---------S--------------------------------- 243 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---------~--------------------------------- 243 (382)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999997653200 0
Q ss_pred -------------HHH---HHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCC
Q 016820 244 -------------KIM---QNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEP 305 (382)
Q Consensus 244 -------------~~~---~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p 305 (382)
..+ +.+.+.+.|++++.++++.++..++++ +.+|.+.+..+++...+.+|.||.|+|..+
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~--v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGY--VKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTE--EEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCE--EEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 001 112223468999999999999886653 444666542124445799999999999765
No 302
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.70 E-value=4.9e-05 Score=69.67 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHHHHcC------CCeEEEecc
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAE------LKPILFEGW 90 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g------~~v~lie~~ 90 (382)
+||+|||||++|+++|+.|++.| .+|+|+|+.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~ 38 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADR 38 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECC
Confidence 48999999999999999999998 999999963
No 303
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.69 E-value=0.0001 Score=69.32 Aligned_cols=95 Identities=20% Similarity=0.255 Sum_probs=69.0
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc---------ch---------------------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR---------AS--------------------------------- 243 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~---------~~--------------------------------- 243 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+... ..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 479999999999999999999999999999875210 00
Q ss_pred ------------------------HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEE
Q 016820 244 ------------------------KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFF 299 (382)
Q Consensus 244 ------------------------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~ 299 (382)
..+ .+.+++.|++++.++++.++..++++. .+.+.+ .+++..++.+|.||.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L-~~~a~~~gv~i~~~~~v~~i~~~~~~~---~v~v~~-~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTL-ADEAARQGVDVEYEVGVTDIKFFGTDS---VTTIED-INGNKREIEARFIID 160 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHH-HHHHHHHTCEEECSEEEEEEEEETTEE---EEEEEE-TTSCEEEEEEEEEEE
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHH-HHHHHhCCCEEEcCCEEEEEEEeCCEE---EEEEEc-CCCCEEEEEcCEEEE
Confidence 011 122334589999999999999876642 134443 224334799999999
Q ss_pred eeCCCC
Q 016820 300 AIGHEP 305 (382)
Q Consensus 300 ~~G~~p 305 (382)
|+|..+
T Consensus 161 A~G~~s 166 (421)
T 3nix_A 161 ASGYGR 166 (421)
T ss_dssp CCGGGC
T ss_pred CCCCch
Confidence 999875
No 304
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.66 E-value=0.00029 Score=65.68 Aligned_cols=35 Identities=31% Similarity=0.306 Sum_probs=31.8
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
.+|+|||+|+.|+-+|..|.+.|.+|+++++.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999876643
No 305
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.66 E-value=0.00012 Score=66.75 Aligned_cols=89 Identities=13% Similarity=0.128 Sum_probs=63.8
Q ss_pred cEEEEcCCchHHHHHHHHhh---cCCEEEEEEeCCCCc-------------------------------chHH-------
Q 016820 207 PLAVIGGGDSAMEEANFLTK---YGSKVYIIHRRDSFR-------------------------------ASKI------- 245 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~---~g~~v~~~~~~~~~~-------------------------------~~~~------- 245 (382)
+|+|||+|..|+-+|..|.+ .|.+|+++++.+... ....
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 899999998764320 0000
Q ss_pred -------------------------------HHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEec
Q 016820 246 -------------------------------MQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKV 294 (382)
Q Consensus 246 -------------------------------~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~ 294 (382)
+.+.+.+..|++++++++|.+|..++++ +.+.. .++..+.+
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~-----~~v~~---~~g~~~~a 154 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK-----WEVSK---QTGSPEQF 154 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS-----EEEEE---SSSCCEEE
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE-----EEEEE---CCCCEEEc
Confidence 0011111227899999999999987765 55554 22345799
Q ss_pred CeEEEeeCC
Q 016820 295 SGLFFAIGH 303 (382)
Q Consensus 295 D~vi~~~G~ 303 (382)
|.||++++.
T Consensus 155 d~vV~A~p~ 163 (342)
T 3qj4_A 155 DLIVLTMPV 163 (342)
T ss_dssp SEEEECSCH
T ss_pred CEEEECCCH
Confidence 999999873
No 306
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.66 E-value=0.00027 Score=66.18 Aligned_cols=93 Identities=17% Similarity=0.091 Sum_probs=66.9
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc--------------------h--------------------
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA--------------------S-------------------- 243 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~--------------------~-------------------- 243 (382)
...+|+|||+|+.|+-+|..|.+.|.+|+++++.+.+.. .
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 346899999999999999999999999999998775410 0
Q ss_pred ---------H----------------HH---HHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecC
Q 016820 244 ---------K----------------IM---QNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVS 295 (382)
Q Consensus 244 ---------~----------------~~---~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D 295 (382)
. .+ +.+.+.+ +++++++++++++.++++ +.+.. .++..+.+|
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-----v~v~~---~~g~~~~a~ 171 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG-----VTVWF---TDGSSASGD 171 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE-----EEEEE---TTSCEEEES
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc-----EEEEE---cCCCEEeeC
Confidence 0 00 0111222 678889999999888764 55544 233579999
Q ss_pred eEEEeeCCCCC
Q 016820 296 GLFFAIGHEPA 306 (382)
Q Consensus 296 ~vi~~~G~~p~ 306 (382)
+||.|.|....
T Consensus 172 ~vV~AdG~~S~ 182 (407)
T 3rp8_A 172 LLIAADGSHSA 182 (407)
T ss_dssp EEEECCCTTCS
T ss_pred EEEECCCcChH
Confidence 99999998753
No 307
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.65 E-value=0.00018 Score=68.54 Aligned_cols=116 Identities=13% Similarity=0.109 Sum_probs=67.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc--------------------CC-CeEEEecccCCCCCCCcceecC--CCcccCCCC
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA--------------------EL-KPILFEGWMANDIAPGGQLTTT--SDVENFPGF 113 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~--------------------g~-~v~lie~~~~~~~~~gg~~~~~--~~~~~~~~~ 113 (382)
...+|+|||+|..|+.+|..|++. |. +|+|+++.. .....+... .....+|+.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~----~~~~~f~~~elrel~~lp~~ 221 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG----PLQAAFTTLELRELADLDGV 221 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC----GGGCCCCHHHHHHGGGCTTE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC----hhhhccChHHHHHhhcCCCc
Confidence 357899999999999999999874 54 899999421 000000000 000011110
Q ss_pred -----CCCC---C----------hHHHHHHHHHHHHH------cCcEEEEe-eEEEEEecCC--cEEEEE----------
Q 016820 114 -----PQGI---L----------GGDLMDRCRNQSLR------FGTQIFTE-TVSKVDFKSR--PFKVFT---------- 156 (382)
Q Consensus 114 -----~~~~---~----------~~~~~~~~~~~~~~------~gi~~~~~-~v~~i~~~~~--~~~v~~---------- 156 (382)
+..+ . ...+.+.+.+.+.+ .+|+++.+ .+.+|..+++ .+.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~ 301 (456)
T 1lqt_A 222 DVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGR 301 (456)
T ss_dssp EEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSS
T ss_pred eeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCccc
Confidence 0000 0 01123445555555 68999888 6888876532 133331
Q ss_pred -----CC--eEEEcCEEEEccCCCCcC
Q 016820 157 -----DS--KSVLADTVIVATGAVAKK 176 (382)
Q Consensus 157 -----~~--~~~~~d~lvlA~G~~~~~ 176 (382)
++ .++.+|.||+|+|.+|+.
T Consensus 302 ~~~~~~g~~~~i~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 302 VAAKDTGEREELPAQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEEEEEEEEECSEEEECSCEECCC
T ss_pred ccccCCCceEEEEcCEEEEccccccCC
Confidence 22 358999999999998876
No 308
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.64 E-value=0.00023 Score=74.57 Aligned_cols=93 Identities=22% Similarity=0.211 Sum_probs=62.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC-CeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL-KPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..+|+|||||..|+.+|..+.++|. +|+++++. ....++. ...++ +.+++.|++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~---------------~~~~~~~-----~~~e~-----~~~~~~Gv~ 386 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK---------------GFVNIRA-----VPEEV-----ELAKEEKCE 386 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS---------------CGGGCCS-----CHHHH-----HHHHHTTCE
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEec---------------ChhhCCC-----CHHHH-----HHHHHcCCE
Confidence 4589999999999999999999997 89999941 0001111 12222 345677999
Q ss_pred EEEe-eEEEEEecCCcEE-EEE--------------CC--eEEEcCEEEEccCCCCc
Q 016820 137 IFTE-TVSKVDFKSRPFK-VFT--------------DS--KSVLADTVIVATGAVAK 175 (382)
Q Consensus 137 ~~~~-~v~~i~~~~~~~~-v~~--------------~~--~~~~~d~lvlA~G~~~~ 175 (382)
++.+ .+.++..+++.+. +.. ++ .++.+|.||+|+|..|.
T Consensus 387 ~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~ 443 (1025)
T 1gte_A 387 FLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLR 443 (1025)
T ss_dssp EECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECC
T ss_pred EEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCC
Confidence 9876 5666665443321 111 11 35899999999999763
No 309
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.61 E-value=5.8e-05 Score=71.45 Aligned_cols=42 Identities=14% Similarity=0.208 Sum_probs=37.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTT 103 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 103 (382)
.+||+|||+|++|+.+|..|++.|++|+++| +...+||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e----~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMD----RNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEe----cCCCccccccc
Confidence 5799999999999999999999999999999 55677777654
No 310
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.54 E-value=7.4e-05 Score=71.04 Aligned_cols=42 Identities=17% Similarity=0.201 Sum_probs=36.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT 102 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~ 102 (382)
..+||+|||+|.+|+.+|..|++.|.+|+++| +....||.+.
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e----~~~~~Gg~~~ 60 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLD----RNPYYGGETA 60 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEe----ccCCCCCCcc
Confidence 45899999999999999999999999999999 5556777654
No 311
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.51 E-value=0.00055 Score=67.12 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=71.8
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcch-----------------------------------------
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRAS----------------------------------------- 243 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~----------------------------------------- 243 (382)
..+|+|||+|..|+..|..+.+.|.+|+++++.+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 358999999999999999999999999999876643100
Q ss_pred -------------------------------------------------HHH---HHHhccCCCcEEEcCceeEEEEecC
Q 016820 244 -------------------------------------------------KIM---QNRALTNPKIDVIWNSVVLEAYGEG 271 (382)
Q Consensus 244 -------------------------------------------------~~~---~~~~l~~~gv~~~~~~~v~~i~~~~ 271 (382)
..+ +.+.+++.||++++++++.++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 000 0112334689999999999998865
Q ss_pred CceeeeeEEEEeccCCceEEEecCeEEEeeCCCC
Q 016820 272 DKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEP 305 (382)
Q Consensus 272 ~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p 305 (382)
+|+ +.+|.+.+ .+++...+.+|.||+|+|...
T Consensus 286 ~g~-v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 286 KGT-VKGILVKG-MYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp TSC-EEEEEEEE-TTTEEEEEECSEEEECCCCCT
T ss_pred CCe-EEEEEEEe-CCCcEEEEECCeEEEeCCCcc
Confidence 332 55677664 124445789999999998753
No 312
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.50 E-value=8.2e-05 Score=71.19 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=29.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC-CeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL-KPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie~ 89 (382)
..+||+|||||++|+.+|..|++.|+ +|+|+|+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~ 36 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEA 36 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeC
Confidence 35799999999999999999999998 8999995
No 313
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.50 E-value=0.00039 Score=64.66 Aligned_cols=97 Identities=15% Similarity=0.160 Sum_probs=68.2
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC------c----------------c---------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF------R----------------A--------------------- 242 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~------~----------------~--------------------- 242 (382)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.. . .
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999977631 0 0
Q ss_pred ------------------h-HHHH---HHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEe
Q 016820 243 ------------------S-KIMQ---NRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFA 300 (382)
Q Consensus 243 ------------------~-~~~~---~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~ 300 (382)
. ..+. .+.+.+.|++++.++++.++..++++. ..+++.. +++..++.+|+||.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~--~~v~~~~--~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGER--PYVTFER--DGERLRLDCDYIAGC 158 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSS--CEEEEEE--TTEEEEEECSEEEEC
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCc--eEEEEec--CCcEEEEEeCEEEEC
Confidence 0 0011 112334589999999999998764321 1244422 243347999999999
Q ss_pred eCCCCC
Q 016820 301 IGHEPA 306 (382)
Q Consensus 301 ~G~~p~ 306 (382)
.|....
T Consensus 159 dG~~S~ 164 (394)
T 1k0i_A 159 DGFHGI 164 (394)
T ss_dssp CCTTCS
T ss_pred CCCCcH
Confidence 998764
No 314
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.49 E-value=8.2e-05 Score=74.33 Aligned_cols=41 Identities=32% Similarity=0.323 Sum_probs=35.1
Q ss_pred cccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcc
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQ 100 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~ 100 (382)
...++|+|||||++|+++|+.|.+.|++|+|+|+ ...+||.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~----~~~~gg~ 145 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEA----RDRVGGR 145 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECS----SSSSBTT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEec----CCCCCCc
Confidence 3458999999999999999999999999999994 4455554
No 315
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.49 E-value=0.00045 Score=67.68 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=70.8
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-------------------------------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA------------------------------------------- 242 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 242 (382)
..|+|||+|..|+..|..|.+.|.+|+++++.+.+..
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 4799999999999999999999999999987663310
Q ss_pred -----------------------------------------------hH---HHHHHhccCCCcEEEcCceeEEEEecCC
Q 016820 243 -----------------------------------------------SK---IMQNRALTNPKIDVIWNSVVLEAYGEGD 272 (382)
Q Consensus 243 -----------------------------------------------~~---~~~~~~l~~~gv~~~~~~~v~~i~~~~~ 272 (382)
.. ..+.+.+++.||+++.++++.++..+++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 00 0011223456899999999999987762
Q ss_pred ceeeeeEEEEeccCCceEEEecCeEEEeeCCCC
Q 016820 273 KKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEP 305 (382)
Q Consensus 273 g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p 305 (382)
|+ +.+|.+.+ .+++...+.+|.||+|+|...
T Consensus 282 g~-v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 282 HS-VVGAVVHG-KHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp SB-EEEEEEEE-TTTEEEEEEEEEEEECCCCCT
T ss_pred Cc-EEEEEEEe-CCCcEEEEEcCEEEEecCCcc
Confidence 32 55677764 224344789999999998754
No 316
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.48 E-value=0.00036 Score=66.28 Aligned_cols=93 Identities=18% Similarity=0.256 Sum_probs=68.3
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc-------------------------------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA------------------------------------------- 242 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 242 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+.+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 4799999999999999999999999999997653210
Q ss_pred --------------------------hHHH---HHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEe
Q 016820 243 --------------------------SKIM---QNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLK 293 (382)
Q Consensus 243 --------------------------~~~~---~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~ 293 (382)
...+ +.+.+++.||+++.++++.++..++++ +..|.+.+ + ..+.
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~--v~~V~~~~---G--~~i~ 179 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQ--TKAVILQT---G--EVLE 179 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTE--EEEEEETT---C--CEEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCc--EEEEEECC---C--CEEE
Confidence 0000 112234579999999999999876542 33444432 3 3699
Q ss_pred cCeEEEeeCCCC
Q 016820 294 VSGLFFAIGHEP 305 (382)
Q Consensus 294 ~D~vi~~~G~~p 305 (382)
+|.||+|+|..+
T Consensus 180 Ad~VVlAtGg~s 191 (447)
T 2i0z_A 180 TNHVVIAVGGKS 191 (447)
T ss_dssp CSCEEECCCCSS
T ss_pred CCEEEECCCCCc
Confidence 999999999987
No 317
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.46 E-value=0.00072 Score=65.12 Aligned_cols=97 Identities=21% Similarity=0.213 Sum_probs=69.3
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc--------------------h--------------------
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA--------------------S-------------------- 243 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~--------------------~-------------------- 243 (382)
...+|+|||+|+.|+-+|..|.+.|.+|+++++.+.+.. .
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 356899999999999999999999999999997654300 0
Q ss_pred ---------------H----HHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 244 ---------------K----IMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 244 ---------------~----~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
+ ..+.+.+.+.|+++++++++.+++.++++ + .+++.+. ++ ..++.+|+||.|.|..
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v-~v~~~~~-~g-~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG--V-TVEVRGP-EG-KHTLRAAYLVGCDGGR 164 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE--E-EEEEEET-TE-EEEEEESEEEECCCTT
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe--E-EEEEEcC-CC-CEEEEeCEEEECCCcc
Confidence 0 00112233458999999999999987764 2 2444441 11 3468999999999987
Q ss_pred C
Q 016820 305 P 305 (382)
Q Consensus 305 p 305 (382)
.
T Consensus 165 S 165 (500)
T 2qa1_A 165 S 165 (500)
T ss_dssp C
T ss_pred h
Confidence 5
No 318
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.46 E-value=9.5e-05 Score=75.44 Aligned_cols=44 Identities=16% Similarity=0.053 Sum_probs=35.8
Q ss_pred cCCCCceEEecccCCc-hhhHHHHHHhhHHHHHHHHHHHHHHccC
Q 016820 330 HTSVPGVFAAGDVQDK-KYRQAVTAAGTGCMAALEAEHYLQEIGS 373 (382)
Q Consensus 330 ~t~~~~vya~GD~~~~-~~~~~~~a~~~g~~aa~~i~~~l~~~~~ 373 (382)
....++||.+|+.... .+...+.|+.+|..+|..|.+.+.+...
T Consensus 790 ~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~~ 834 (852)
T 2xag_A 790 PQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMY 834 (852)
T ss_dssp CCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCGG
T ss_pred cCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 3456899999998753 4678899999999999999999976543
No 319
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.45 E-value=0.00073 Score=65.04 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=69.2
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc--------------------h--------------------
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA--------------------S-------------------- 243 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~--------------------~-------------------- 243 (382)
...+|+|||+|+.|+-+|..|.+.|.+|+++++.+.... .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 345799999999999999999999999999998654300 0
Q ss_pred ---------------H----HHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 244 ---------------K----IMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 244 ---------------~----~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
+ ..+.+.+.+.|+++++++++.+++.++++ + .+++.+. ++ ..++.+|+||.|.|..
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v-~v~~~~~-~g-~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH--V-VVEVEGP-DG-PRSLTTRYVVGCDGGR 165 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC--E-EEEEECS-SC-EEEEEEEEEEECCCTT
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE--E-EEEEEcC-CC-cEEEEeCEEEEccCcc
Confidence 0 00112233458999999999999887765 2 2444431 12 3478999999999987
Q ss_pred C
Q 016820 305 P 305 (382)
Q Consensus 305 p 305 (382)
.
T Consensus 166 S 166 (499)
T 2qa2_A 166 S 166 (499)
T ss_dssp C
T ss_pred c
Confidence 5
No 320
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.43 E-value=0.00043 Score=63.48 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=30.9
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 321
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.42 E-value=0.00021 Score=68.79 Aligned_cols=97 Identities=21% Similarity=0.321 Sum_probs=69.5
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc---------------hHHHH---HHhccCCCcEEEcCceeEEE
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA---------------SKIMQ---NRALTNPKIDVIWNSVVLEA 267 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~---------------~~~~~---~~~l~~~gv~~~~~~~v~~i 267 (382)
.+|+|||+|+.|+.+|..|.+. .+|+++++.+.+.. ...+. .+.+ +.+++++.++.+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 5799999999999999999999 99999998765410 11111 1223 679999999999888
Q ss_pred EecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCCChhh
Q 016820 268 YGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATKF 309 (382)
Q Consensus 268 ~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~~ 309 (382)
..++.. +.+.....++...+.+|.++++||..|....
T Consensus 187 ~~~~~~-----~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~ 223 (493)
T 1y56_A 187 FDKGEY-----FLVPVVRGDKLIEILAKRVVLATGAIDSTML 223 (493)
T ss_dssp EECSSS-----EEEEEEETTEEEEEEESCEEECCCEEECCCC
T ss_pred EcCCcE-----EEEEEecCCeEEEEECCEEEECCCCCccCCC
Confidence 876642 2222211233347899999999999876543
No 322
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.41 E-value=0.00065 Score=63.33 Aligned_cols=35 Identities=34% Similarity=0.606 Sum_probs=32.2
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS 239 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~ 239 (382)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46899999999999999999999999999998764
No 323
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.36 E-value=0.00041 Score=67.96 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=67.9
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc------------------------------------c-------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR------------------------------------A------- 242 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~------------------------------------~------- 242 (382)
..|+|||+|+.|+-+|..|.+.|.+|+++++.+... .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999765320 0
Q ss_pred ----------------h----HHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCce-EEEecCeEEEee
Q 016820 243 ----------------S----KIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQV-SDLKVSGLFFAI 301 (382)
Q Consensus 243 ----------------~----~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~-~~~~~D~vi~~~ 301 (382)
. ...+.+.+++.|++++.++++++++.++++ + .+++.. .++ ..+.+|+||.|.
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~--v-~v~~~~---~~G~~~~~a~~vV~AD 203 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA--V-EVTVAG---PSGPYPVRARYGVGCD 203 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC--E-EEEEEE---TTEEEEEEESEEEECS
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe--E-EEEEEe---CCCcEEEEeCEEEEcC
Confidence 0 011112233458999999999999988765 1 234432 233 679999999999
Q ss_pred CCCC
Q 016820 302 GHEP 305 (382)
Q Consensus 302 G~~p 305 (382)
|...
T Consensus 204 G~~S 207 (570)
T 3fmw_A 204 GGRS 207 (570)
T ss_dssp CSSC
T ss_pred CCCc
Confidence 9865
No 324
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.32 E-value=0.00085 Score=65.21 Aligned_cols=99 Identities=19% Similarity=0.243 Sum_probs=68.9
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc--------------------------------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR-------------------------------------------- 241 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~-------------------------------------------- 241 (382)
.+|+|||+|+.|+-+|..|.+.|.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 579999999999999999999999999998875320
Q ss_pred ------------c-------------------hH----HHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEeccC
Q 016820 242 ------------A-------------------SK----IMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVT 286 (382)
Q Consensus 242 ------------~-------------------~~----~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~ 286 (382)
. .+ ..+.+.+++.|+++++++++++++.+++++ +..+.+.....
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~-~~~v~v~~~~~ 164 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDA-GAGVTARLAGP 164 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGG-CSEEEEEEEET
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCc-cccEEEEEEcC
Confidence 0 00 001122334689999999999999877621 11133332111
Q ss_pred CceEEEecCeEEEeeCCCC
Q 016820 287 GQVSDLKVSGLFFAIGHEP 305 (382)
Q Consensus 287 ~~~~~~~~D~vi~~~G~~p 305 (382)
+...++.+|+||.|.|...
T Consensus 165 ~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 165 DGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp TEEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCCcc
Confidence 2246799999999999875
No 325
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.32 E-value=0.0009 Score=65.79 Aligned_cols=92 Identities=18% Similarity=0.330 Sum_probs=65.5
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC-Cc------------------------c------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS-FR------------------------A------------------ 242 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~-~~------------------------~------------------ 242 (382)
-.|+|||+|..|+++|..+++.|.+|+++++... +. .
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999997631 10 0
Q ss_pred -----------------hHHHHHHhccC-CCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 243 -----------------SKIMQNRALTN-PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 243 -----------------~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
....+.+.+++ .|++++ +..+.++..+++. +.+|.+.+ + ..+.+|.||+|+|..
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~--V~GV~t~d---G--~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDR--VVGAVTQM---G--LKFRAKAVVLTVGTF 180 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSB--EEEEEETT---S--EEEEEEEEEECCSTT
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCE--EEEEEECC---C--CEEECCEEEEcCCCC
Confidence 00111233445 699985 6789999876542 44454432 3 579999999999985
Q ss_pred C
Q 016820 305 P 305 (382)
Q Consensus 305 p 305 (382)
+
T Consensus 181 s 181 (651)
T 3ces_A 181 L 181 (651)
T ss_dssp T
T ss_pred c
Confidence 4
No 326
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.32 E-value=0.00065 Score=62.79 Aligned_cols=33 Identities=24% Similarity=0.280 Sum_probs=30.4
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 579999999999999999999999999998753
No 327
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.30 E-value=0.0018 Score=63.49 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=70.6
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcc------------------------------------------
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRA------------------------------------------ 242 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 242 (382)
..+|+|||+|..|+..|..+.+.|.+|+++++.+.+..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 45899999999999999999999999999987653310
Q ss_pred ------------------------------------------------hHHH---HHHhccCCCcEEEcCceeEEEEecC
Q 016820 243 ------------------------------------------------SKIM---QNRALTNPKIDVIWNSVVLEAYGEG 271 (382)
Q Consensus 243 ------------------------------------------------~~~~---~~~~l~~~gv~~~~~~~v~~i~~~~ 271 (382)
...+ +.+.+++.||++++++++.++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 0000 0122345689999999999998665
Q ss_pred CceeeeeEEEEeccCCceEEEecCeEEEeeCCCC
Q 016820 272 DKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEP 305 (382)
Q Consensus 272 ~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p 305 (382)
+| .+.+|.+.+ .+++...+.+|.||+|+|..+
T Consensus 286 ~g-~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 286 SG-KVTGVLVKG-EYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp -C-CEEEEEEEE-TTTEEEEEECSEEEECCCCCT
T ss_pred CC-eEEEEEEEe-CCCcEEEEEcCEEEEeCCCCc
Confidence 23 255677764 224445789999999999765
No 328
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.28 E-value=0.00085 Score=65.73 Aligned_cols=92 Identities=16% Similarity=0.270 Sum_probs=65.3
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC-Cc------------------------c------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS-FR------------------------A------------------ 242 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~-~~------------------------~------------------ 242 (382)
-.|+|||+|..|+++|..+++.|.+|.++++... +. .
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999998631 10 0
Q ss_pred -----------------hHHHHHHhccC-CCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 243 -----------------SKIMQNRALTN-PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 243 -----------------~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
....+.+.+++ .|++++ +..+.++..+++. +.+|.+.+ + ..+.+|.||+|+|..
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~--V~GV~t~d---G--~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQ--VVGVRTNL---G--VEYKTKAVVVTTGTF 179 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSB--EEEEEETT---S--CEEECSEEEECCTTC
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCE--EEEEEECC---C--cEEEeCEEEEccCCC
Confidence 00011223444 689985 6789998876542 44454432 3 579999999999975
Q ss_pred C
Q 016820 305 P 305 (382)
Q Consensus 305 p 305 (382)
+
T Consensus 180 s 180 (637)
T 2zxi_A 180 L 180 (637)
T ss_dssp B
T ss_pred c
Confidence 3
No 329
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.28 E-value=0.00021 Score=69.72 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=31.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~ 90 (382)
..+|++|||+|++|+.+|.+|++.|.+|+|+|+.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g 39 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERG 39 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4589999999999999999999999999999964
No 330
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.26 E-value=0.00077 Score=62.04 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=29.7
Q ss_pred cEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 207 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
+|+|||+|.+|+.+|..|.+.|.+|+++++..
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 69999999999999999999999999998754
No 331
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.25 E-value=0.00056 Score=65.80 Aligned_cols=34 Identities=35% Similarity=0.491 Sum_probs=29.8
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS 239 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~ 239 (382)
|+|+|||+|..|+-+|.+|++.|.+|+++++++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~ 35 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDK 35 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC--
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCC
Confidence 6899999999999999999999999999886543
No 332
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.25 E-value=0.00099 Score=62.34 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=32.0
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCE-EEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSK-VYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~-v~~~~~~~~~ 240 (382)
.+|+|||+|+.|+.+|..|.+.|.+ |+++++.+.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 5799999999999999999999999 9999987653
No 333
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.22 E-value=0.0019 Score=62.37 Aligned_cols=50 Identities=14% Similarity=0.241 Sum_probs=38.0
Q ss_pred CCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecC-eEEEeeCCCC
Q 016820 253 NPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVS-GLFFAIGHEP 305 (382)
Q Consensus 253 ~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D-~vi~~~G~~p 305 (382)
+.|++++++++++++..+++|+ +.+|.+.. .++...+.+| .||+|+|.-.
T Consensus 214 ~~Gv~i~~~t~v~~L~~~~~g~-v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 214 KLGVRAEYDMRVQTLVTDDTGR-VVGIVAKQ--YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HTTCEEECSEEEEEEEECTTCC-EEEEEEEE--TTEEEEEEEEEEEEECCCCCT
T ss_pred HcCCEEEecCEeEEEEECCCCc-EEEEEEEE--CCcEEEEEeCCeEEEeCCChh
Confidence 4689999999999999874443 66677765 2444578996 9999998765
No 334
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.21 E-value=0.001 Score=61.33 Aligned_cols=33 Identities=21% Similarity=0.403 Sum_probs=30.2
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
.++|+|||+|..|+-+|..|+ .|.+|+++++.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 578999999999999999999 599999999874
No 335
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.20 E-value=0.0015 Score=65.30 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.3
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3689999999999999999999999999999853
No 336
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.17 E-value=0.0022 Score=59.24 Aligned_cols=33 Identities=36% Similarity=0.504 Sum_probs=30.6
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
.+|+|||+|.+|+.+|..|.+.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 579999999999999999999999999998763
No 337
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.16 E-value=0.0025 Score=61.94 Aligned_cols=93 Identities=17% Similarity=0.180 Sum_probs=63.9
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc---------------------c--hH----------------HH
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR---------------------A--SK----------------IM 246 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~---------------------~--~~----------------~~ 246 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. . .. .+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999865320 0 00 11
Q ss_pred ---HHHhccCC--CcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 247 ---QNRALTNP--KIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 247 ---~~~~l~~~--gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
.+...++. +++++.++++.+++.++++. . ..+.. .++.++.+|.||+|+|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~--w~V~~---~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATN-T--WTVDT---NHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT-E--EEEEE---TTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC-e--EEEEE---CCCCEEEeCEEEECcCCC
Confidence 11222333 35788899999998765421 1 33433 223468999999999963
No 338
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.07 E-value=0.0021 Score=63.12 Aligned_cols=91 Identities=21% Similarity=0.365 Sum_probs=63.5
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC-Cc------c------------------------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS-FR------A------------------------------------ 242 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~-~~------~------------------------------------ 242 (382)
..|+|||+|..|+++|..+++.|.+|+++++... +. .
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~~ 101 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNR 101 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhccc
Confidence 5799999999999999999999999999998631 10 0
Q ss_pred -----------------hHHHHHHhccC-CCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 243 -----------------SKIMQNRALTN-PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 243 -----------------~~~~~~~~l~~-~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
....+.+.+++ .|++++ ...+.++..+++. +.+|.+.+ + ..+.+|.||+|+|..
T Consensus 102 ~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~--V~GV~t~~---G--~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 102 SKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGK--FSSVTVRS---G--RAIQAKAAILACGTF 173 (641)
T ss_dssp SSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTE--EEEEEETT---S--CEEEEEEEEECCTTC
T ss_pred ccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCE--EEEEEECC---C--cEEEeCEEEECcCCC
Confidence 00011223444 589986 4588888776542 33344322 3 579999999999965
No 339
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.07 E-value=0.0031 Score=61.58 Aligned_cols=51 Identities=14% Similarity=0.002 Sum_probs=39.9
Q ss_pred CCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCC
Q 016820 253 NPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEP 305 (382)
Q Consensus 253 ~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p 305 (382)
+.|++++.++++.++..++++ +.+|++.+..++++..+.+|.||.|+|.-.
T Consensus 182 ~~G~~i~~~~~V~~l~~~~g~--v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 182 ARGAVALNYMKVESFIYDQGK--VVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HTTCEEEESEEEEEEEEETTE--EEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HcCCEEEcCCEEEEEEEcCCe--EEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 468899999999999887653 566777765456567899999999999753
No 340
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.07 E-value=0.0016 Score=60.67 Aligned_cols=33 Identities=27% Similarity=0.514 Sum_probs=30.4
Q ss_pred CcEEEEcCCchHHHHHHHHhh-cC-CEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTK-YG-SKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~-~g-~~v~~~~~~~ 238 (382)
.+|+|||+|..|+.+|..|.+ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 89 9999998764
No 341
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.03 E-value=0.00035 Score=69.59 Aligned_cols=32 Identities=19% Similarity=0.395 Sum_probs=30.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcC--------CCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAE--------LKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g--------~~v~lie~ 89 (382)
.++|+|||||++|+++|+.|.+.| ++|+|+|+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~ 95 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEA 95 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEec
Confidence 478999999999999999999998 99999994
No 342
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.99 E-value=0.0028 Score=63.53 Aligned_cols=34 Identities=26% Similarity=0.301 Sum_probs=31.5
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999999999864
No 343
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.97 E-value=0.00044 Score=67.60 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=31.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcC-CCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAE-LKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g-~~v~lie~~ 90 (382)
..+|+||||||.||+.+|.+|++.+ .+|+|||+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG 39 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAG 39 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecC
Confidence 4599999999999999999999997 799999974
No 344
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.97 E-value=0.00035 Score=67.95 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=30.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~ 90 (382)
..+|+||||+|.+|+.+|.+|++ |.+|+|+|+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG 57 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERG 57 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSS
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecC
Confidence 45899999999999999999999 9999999963
No 345
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=96.94 E-value=0.0039 Score=61.18 Aligned_cols=100 Identities=15% Similarity=0.216 Sum_probs=69.6
Q ss_pred CcEEEEcCCchHHHHHHHHhhc------CCEEEEEEeCCCCcc-------------------------------------
Q 016820 206 KPLAVIGGGDSAMEEANFLTKY------GSKVYIIHRRDSFRA------------------------------------- 242 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~------g~~v~~~~~~~~~~~------------------------------------- 242 (382)
.+|+|||+|+.|+.+|..|.+. |.+|+++++.+.+..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 999999987643210
Q ss_pred -------------hH--------------H---HHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEec---cCCc-
Q 016820 243 -------------SK--------------I---MQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNL---VTGQ- 288 (382)
Q Consensus 243 -------------~~--------------~---~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~---~~~~- 288 (382)
.. . .+.+.+++.|++++.++.+.++..+++|. +.+|.+.+. .+++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~-V~gV~~~~~g~~~~G~~ 194 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGS-VKGIATNDVGIQKDGAP 194 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSS-EEEEEECCEEECTTSCE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCC-EEEEEeCCccccCCCCc
Confidence 00 0 01122334689999999999998876543 334554321 1121
Q ss_pred ------eEEEecCeEEEeeCCCCC
Q 016820 289 ------VSDLKVSGLFFAIGHEPA 306 (382)
Q Consensus 289 ------~~~~~~D~vi~~~G~~p~ 306 (382)
+.++.+|+||.|.|....
T Consensus 195 ~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 195 KTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEEECCCEEECSEEEECCCTTCH
T ss_pred ccccCCceEEECCEEEEeeCCCch
Confidence 257999999999998753
No 346
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.94 E-value=0.00047 Score=66.87 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=30.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHH-cCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAAR-AELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~-~g~~v~lie~ 89 (382)
..+|+||||||++|+.+|.+|++ .+++|+|+|+
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEa 49 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEA 49 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECS
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcC
Confidence 36999999999999999999998 5799999996
No 347
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.93 E-value=0.0042 Score=57.36 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=30.1
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++..
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 469999999999999999999999999998754
No 348
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.79 E-value=0.00092 Score=65.38 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=31.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc-CCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA-ELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~-g~~v~lie~~ 90 (382)
..+|+||||||.||+.+|.+|++. +.+|+|||+.
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG 52 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESG 52 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSS
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecC
Confidence 469999999999999999999986 8999999964
No 349
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.78 E-value=0.009 Score=57.42 Aligned_cols=33 Identities=33% Similarity=0.402 Sum_probs=30.3
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
..|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 479999999999999999999999999998754
No 350
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.78 E-value=0.0064 Score=56.40 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=30.2
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
..|+|||+|..|+.+|..|.+.|.+|+++++.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999998754
No 351
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.66 E-value=0.0015 Score=63.07 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=31.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~ 90 (382)
..+|++|||+|++|+.+|..|.+.|.+|+|+|+.
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 43 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMG 43 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC
Confidence 4689999999999999999999999999999964
No 352
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.65 E-value=0.0014 Score=63.16 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~ 90 (382)
..+|++|||+|++|+.+|..|.+.|.+|+|+|+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 37 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMG 37 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3589999999999999999999999999999964
No 353
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.65 E-value=0.012 Score=57.16 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=31.6
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
.+|+|||+|++|+-+|..|.+.|.+|+++++.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 47999999999999999999999999999987644
No 354
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.63 E-value=0.014 Score=57.43 Aligned_cols=50 Identities=18% Similarity=0.302 Sum_probs=36.2
Q ss_pred CCC-cEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 253 NPK-IDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 253 ~~g-v~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
+.| |+++.++.+.++..+++ .+.++.+.+..+++...+.++.||+|+|..
T Consensus 146 ~~gnv~i~~~~~v~~l~~~~g--~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVDDG--HVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp TCTTEEEEETEEEEEEEEETT--EEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred hCCCcEEEeCCEEEEEEEeCC--EEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 456 99999999999987653 255565554334544579999999999873
No 355
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.60 E-value=0.0042 Score=57.99 Aligned_cols=32 Identities=22% Similarity=0.405 Sum_probs=29.7
Q ss_pred CcEEEEcCCchHHHHHHHHhhc--CCEEEEEEeC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKY--GSKVYIIHRR 237 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~--g~~v~~~~~~ 237 (382)
.+|+|||+|.+|+.+|..|.+. |.+|+++++.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 4799999999999999999999 9999999865
No 356
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.59 E-value=0.0062 Score=60.45 Aligned_cols=34 Identities=15% Similarity=0.318 Sum_probs=30.7
Q ss_pred CcEEEEcCCchHHHHHHHHhh-cCCEEEEEEeCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTK-YGSKVYIIHRRDS 239 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~-~g~~v~~~~~~~~ 239 (382)
.+|+|||+|+.|+-+|..|.+ .|.+|+++++.+.
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 479999999999999999999 8999999987654
No 357
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.55 E-value=0.016 Score=56.89 Aligned_cols=49 Identities=18% Similarity=0.189 Sum_probs=36.2
Q ss_pred CCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCC
Q 016820 254 PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGH 303 (382)
Q Consensus 254 ~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~ 303 (382)
.||+++.++.+.++..+++|+ +.++.+.+..+++...+.++.||+|+|.
T Consensus 156 ~gv~i~~~~~v~~L~~~~~g~-v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 156 NHTTIFSEWYALDLVKNQDGA-VVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp TTCEEEETEEEEEEEECTTSC-EEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCCEEEeCcEEEEEEECCCCE-EEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 578999999999998753332 5667765433454457899999999986
No 358
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.52 E-value=0.0027 Score=62.37 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=31.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHH-cCCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAAR-AELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~-~g~~v~lie~~ 90 (382)
..+|++|||+|++|+.+|..|++ .|.+|+|+|+.
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g 57 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKG 57 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecC
Confidence 46899999999999999999999 79999999963
No 359
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.52 E-value=0.0079 Score=57.35 Aligned_cols=31 Identities=29% Similarity=0.489 Sum_probs=28.9
Q ss_pred cEEEEcCCchHHHHHHHHhhcCCEEEEEEeC
Q 016820 207 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRR 237 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~ 237 (382)
.|+|||+|..|+..|..+.+.|.+|+++++.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4899999999999999999999999999876
No 360
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.47 E-value=0.0011 Score=64.70 Aligned_cols=33 Identities=15% Similarity=0.314 Sum_probs=30.5
Q ss_pred cccEEEECCcHHHHHHHHHHHH-cCCCeEEEecc
Q 016820 58 KTKVCIIGSGPAAHTAAIYAAR-AELKPILFEGW 90 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~-~g~~v~lie~~ 90 (382)
.+|++|||||.||+.+|.+|++ .+.+|+|||+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG 35 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAG 35 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSS
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecC
Confidence 4899999999999999999999 58999999963
No 361
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.42 E-value=0.013 Score=56.81 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=37.4
Q ss_pred CCcEEEcCceeEEEEecCCc-----eeeeeEEEEeccCCceEEEecCeEEEeeCCCC
Q 016820 254 PKIDVIWNSVVLEAYGEGDK-----KVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEP 305 (382)
Q Consensus 254 ~gv~~~~~~~v~~i~~~~~g-----~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p 305 (382)
.||+++.++.+.++..++++ ..+.++.+.+..+++...+.++.||+|+|...
T Consensus 152 ~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 152 PNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp TTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred CCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 58999999999999873322 13566777653335445789999999999765
No 362
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.42 E-value=0.0022 Score=62.43 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=31.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHc-CCCeEEEecc
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARA-ELKPILFEGW 90 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~-g~~v~lie~~ 90 (382)
..+|++|||+|.+|+.+|.+|++. |.+|+|+|+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g 46 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAG 46 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 468999999999999999999998 8999999974
No 363
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.38 E-value=0.0021 Score=54.41 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=31.3
Q ss_pred ccccccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 55 QTLKTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 55 ~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
....+.|+|||||..|...+..|.+.|.+|+|++
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVva 61 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVA 61 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEEC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence 3356899999999999999999999999999999
No 364
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.37 E-value=0.014 Score=56.12 Aligned_cols=56 Identities=18% Similarity=0.190 Sum_probs=40.7
Q ss_pred CCCcEEEcCceeEEEEecCCce-----eeeeEEEEeccCCceEEEecCeEEEeeCCCCChh
Q 016820 253 NPKIDVIWNSVVLEAYGEGDKK-----VLGGLKVKNLVTGQVSDLKVSGLFFAIGHEPATK 308 (382)
Q Consensus 253 ~~gv~~~~~~~v~~i~~~~~g~-----~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p~~~ 308 (382)
+.+..++++++|.+++..+.+. ....|+..+..+++...+.++.+++|+|..|..+
T Consensus 157 ~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 157 QFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp TTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCC
T ss_pred HcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCC
Confidence 4455678899999998755321 1345666665666677899999999999887655
No 365
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.31 E-value=0.034 Score=54.79 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=36.7
Q ss_pred CCCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 253 NPKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 253 ~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
+.||+++.++.+.++..+++ .+.++.+.+..+++...+.++.||+|+|.-
T Consensus 167 ~~gv~i~~~~~v~~Li~~~g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 167 RYDTSYFVEYFALDLLMENG--ECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp TSCCEEEETEEEEEEEEETT--EEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred hCCCEEEEceEEEEEEEECC--EEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 45789999999999887543 256677655334555678999999999864
No 366
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.30 E-value=0.0053 Score=47.92 Aligned_cols=32 Identities=9% Similarity=0.208 Sum_probs=30.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
.+.+|+|+|.|..|..+|..|.+.|++|+++|
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid 37 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIE 37 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 45789999999999999999999999999999
No 367
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.25 E-value=0.029 Score=54.75 Aligned_cols=33 Identities=30% Similarity=0.326 Sum_probs=30.3
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 579999999999999999999999999998654
No 368
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.18 E-value=0.02 Score=55.49 Aligned_cols=34 Identities=21% Similarity=0.468 Sum_probs=30.9
Q ss_pred CCcEEEEcCCchHHHHHHHHhh---cCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTK---YGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~---~g~~v~~~~~~~ 238 (382)
..+|+|||+|..|+.+|..|.+ .|.+|+++++..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 3589999999999999999999 899999999754
No 369
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.03 E-value=0.0051 Score=58.31 Aligned_cols=81 Identities=15% Similarity=0.032 Sum_probs=54.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
..++|.|||.|.+|+++|..|+++|++|++.|... . .... ..+.+++.|++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~-----------------------~--~~~~----~~~~L~~~gi~ 58 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP-----------------------F--DENP----TAQSLLEEGIK 58 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC-----------------------G--GGCH----HHHHHHHTTCE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc-----------------------c--cCCh----HHHHHHhCCCE
Confidence 34789999999999999999999999999999310 0 0011 22345667998
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCC
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQ 178 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~ 178 (382)
++.+.- +++. + ++ .+|.||+++|..+..|.
T Consensus 59 ~~~g~~----~~~~---~--~~---~~d~vv~spgi~~~~p~ 88 (451)
T 3lk7_A 59 VVCGSH----PLEL---L--DE---DFCYMIKNPGIPYNNPM 88 (451)
T ss_dssp EEESCC----CGGG---G--GS---CEEEEEECTTSCTTSHH
T ss_pred EEECCC----hHHh---h--cC---CCCEEEECCcCCCCChh
Confidence 876531 1100 0 00 17899999999876664
No 370
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.01 E-value=0.0076 Score=46.95 Aligned_cols=31 Identities=19% Similarity=0.141 Sum_probs=29.5
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
.++++|+|+|..|..+|..|.+.|++|+++|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 3589999999999999999999999999999
No 371
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.99 E-value=0.021 Score=58.46 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=30.6
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCC-EEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGS-KVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~-~v~~~~~~~ 238 (382)
.+|+|||+|.+|+.+|..|.+.|. +|+++++..
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~ 38 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 38 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 579999999999999999999998 899998765
No 372
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.94 E-value=0.0057 Score=52.90 Aligned_cols=34 Identities=29% Similarity=0.497 Sum_probs=31.5
Q ss_pred cEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 207 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
.|+|||+|++|+.+|..|.+.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999987654
No 373
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.94 E-value=0.0083 Score=58.97 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=37.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEecccCCCCCCCccee
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEGWMANDIAPGGQLT 102 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~ 102 (382)
..+|++|||+|..|..+|..|++.|.+|.+|| +....||.+.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id----~~~~~gg~~~ 48 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVD----SRSYYGGNWA 48 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEC----SSSSSCGGGC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEc----CCCcccCccc
Confidence 36999999999999999999999999999999 5567777644
No 374
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.92 E-value=0.02 Score=56.98 Aligned_cols=35 Identities=26% Similarity=0.405 Sum_probs=31.2
Q ss_pred CcEEEEcCCchHHHHHHHHhh-----cCCEEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTK-----YGSKVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~-----~g~~v~~~~~~~~~ 240 (382)
..|+|||+|+.|+-+|..|.+ .|.+|+++++.+..
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 369999999999999999999 99999999977543
No 375
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.81 E-value=0.011 Score=46.81 Aligned_cols=31 Identities=10% Similarity=0.086 Sum_probs=29.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
..+++|+|+|..|..+|..|.+.|++|+++|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid 33 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVIS 33 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 4689999999999999999999999999999
No 376
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.71 E-value=0.011 Score=47.01 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=30.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
...+|+|+|+|..|..+|..|.+.|++|+++++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 346899999999999999999999999999994
No 377
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.66 E-value=0.011 Score=45.74 Aligned_cols=30 Identities=20% Similarity=0.191 Sum_probs=28.8
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
++|+|+|+|..|..+|..|.+.|++|+++|
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d 34 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLID 34 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 579999999999999999999999999999
No 378
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.60 E-value=0.059 Score=53.46 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=36.3
Q ss_pred CCcEEEcCceeEEEEecCCceeeeeEEEEeccCCceEEEecCeEEEeeCCCC
Q 016820 254 PKIDVIWNSVVLEAYGEGDKKVLGGLKVKNLVTGQVSDLKVSGLFFAIGHEP 305 (382)
Q Consensus 254 ~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~p 305 (382)
.|++++.++.+.++..+++ .+.++.+.+..++....+.++.||+|||.-.
T Consensus 171 ~gv~i~~~~~v~~L~~~~g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 171 LGVSIQDRKEAIALIHQDG--KCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HTCEEECSEEEEEEEEETT--EEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred CCCEEEECcEEEEEEecCC--EEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4788899999999876543 2556666543445455789999999998764
No 379
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.43 E-value=0.017 Score=44.79 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.+|+|+|+|..|..+|..|.+.|++|+++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 5799999999999999999999999999993
No 380
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.39 E-value=0.028 Score=50.68 Aligned_cols=132 Identities=17% Similarity=0.053 Sum_probs=72.9
Q ss_pred cccEEEECCcHHHHH-HHHHHHHcCCCeEEEecccCCCCCCCcceecCCCcccCCCCCCCCChHHHHHHHHHHHHHcCcE
Q 016820 58 KTKVCIIGSGPAAHT-AAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQ 136 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~-~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 136 (382)
.++|.|||.|.+|++ +|..|.++|++|++.|.. . . .. ..+.+++.|++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~---------------~------~------~~----~~~~L~~~gi~ 52 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAK---------------M------Y------PP----MSTQLEALGID 52 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESS---------------C------C------TT----HHHHHHHTTCE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCC---------------C------C------cH----HHHHHHhCCCE
Confidence 368999999999996 888999999999999931 0 0 01 12334566888
Q ss_pred EEEeeEEEEEecCCcEEEEECCeEEEcCEEEEccCCCCcCCCCCCCccccCCCcceeeeccCCCCCCCCCcEEEEcCC--
Q 016820 137 IFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGG-- 214 (382)
Q Consensus 137 ~~~~~v~~i~~~~~~~~v~~~~~~~~~d~lvlA~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G-- 214 (382)
++.+. +++. + .. -.+|.||+++|..+..|.+.-....-...+...++..... ....+-|.|-|..
T Consensus 53 v~~g~----~~~~----l--~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~-~~~~~~IaVTGTnGK 119 (326)
T 3eag_A 53 VYEGF----DAAQ----L--DE--FKADVYVIGNVAKRGMDVVEAILNLGLPYISGPQWLSENV-LHHHWVLGVAGTHGK 119 (326)
T ss_dssp EEESC----CGGG----G--GS--CCCSEEEECTTCCTTCHHHHHHHHTTCCEEEHHHHHHHHT-GGGSEEEEEESSSCH
T ss_pred EECCC----CHHH----c--CC--CCCCEEEECCCcCCCCHHHHHHHHcCCcEEeHHHHHHHHH-hcCCCEEEEECCCCH
Confidence 86542 1110 0 00 1479999999998776643211110001111111111100 1112346666653
Q ss_pred -chHHHHHHHHhhcCCEEEE
Q 016820 215 -DSAMEEANFLTKYGSKVYI 233 (382)
Q Consensus 215 -~~a~e~a~~l~~~g~~v~~ 233 (382)
-+..-++..|.+.|.++.+
T Consensus 120 TTTt~ll~~iL~~~g~~~~~ 139 (326)
T 3eag_A 120 TTTASMLAWVLEYAGLAPGF 139 (326)
T ss_dssp HHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHHHHcCCCceE
Confidence 2344456667777776643
No 381
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.30 E-value=0.099 Score=52.87 Aligned_cols=34 Identities=29% Similarity=0.624 Sum_probs=31.1
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
..+|+|||+|..|+..|..|.+.|.+|+++++.+
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 369 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKD 369 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccc
Confidence 5689999999999999999999999999998754
No 382
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.21 E-value=0.018 Score=42.98 Aligned_cols=32 Identities=13% Similarity=0.351 Sum_probs=29.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcC-CCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAE-LKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g-~~v~lie~ 89 (382)
.++|+|+|+|..|..++..|.+.| ++|+++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC
Confidence 357999999999999999999999 99999983
No 383
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.19 E-value=0.032 Score=50.33 Aligned_cols=79 Identities=19% Similarity=0.084 Sum_probs=57.2
Q ss_pred CCcEEEEcCCchHHH-HHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEEe
Q 016820 205 DKPLAVIGGGDSAME-EANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVKN 283 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e-~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~~ 283 (382)
.++|.|||-|.+|+. +|..|.++|.+|+..+.+...+. .+.|++.|++++.+... +.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~-----~~~L~~~gi~v~~g~~~-----~~------------ 61 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPM-----STQLEALGIDVYEGFDA-----AQ------------ 61 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTH-----HHHHHHTTCEEEESCCG-----GG------------
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHH-----HHHHHhCCCEEECCCCH-----HH------------
Confidence 478999999999997 88999999999999998765322 23355568887654210 00
Q ss_pred ccCCceEE-EecCeEEEeeCCCCChhhhc
Q 016820 284 LVTGQVSD-LKVSGLFFAIGHEPATKFVD 311 (382)
Q Consensus 284 ~~~~~~~~-~~~D~vi~~~G~~p~~~~~~ 311 (382)
.. ..+|.||.++|..++.+.+.
T Consensus 62 ------l~~~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 62 ------LDEFKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp ------GGSCCCSEEEECTTCCTTCHHHH
T ss_pred ------cCCCCCCEEEECCCcCCCCHHHH
Confidence 00 24799999999998776554
No 384
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.01 E-value=0.13 Score=51.01 Aligned_cols=50 Identities=10% Similarity=0.148 Sum_probs=36.0
Q ss_pred Cc-EEEcCceeEEEEecCCc-eeeeeEEEEeccCCceEEEecCeEEEeeCCC
Q 016820 255 KI-DVIWNSVVLEAYGEGDK-KVLGGLKVKNLVTGQVSDLKVSGLFFAIGHE 304 (382)
Q Consensus 255 gv-~~~~~~~v~~i~~~~~g-~~~~~v~~~~~~~~~~~~~~~D~vi~~~G~~ 304 (382)
|| +++.++.+.++..++++ ..+.++.+.+..+++...+.++.||+|+|..
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 88 89999999999876541 1366676654344555578999999999853
No 385
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.91 E-value=0.035 Score=52.50 Aligned_cols=83 Identities=19% Similarity=0.141 Sum_probs=59.5
Q ss_pred CCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEE
Q 016820 203 FRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVK 282 (382)
Q Consensus 203 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~ 282 (382)
..+++|.|+|.|.+|+.+|..|.+.|.+|+..+.++.-. . .. .+.|++.|++++.+... .+
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~-~-~~-~~~L~~~gi~~~~g~~~-----~~----------- 67 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE-N-PT-AQSLLEEGIKVVCGSHP-----LE----------- 67 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG-C-HH-HHHHHHTTCEEEESCCC-----GG-----------
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC-C-hH-HHHHHhCCCEEEECCCh-----HH-----------
Confidence 457899999999999999999999999999998865311 1 11 23466679988765421 00
Q ss_pred eccCCceEEEe-cCeEEEeeCCCCChhhhc
Q 016820 283 NLVTGQVSDLK-VSGLFFAIGHEPATKFVD 311 (382)
Q Consensus 283 ~~~~~~~~~~~-~D~vi~~~G~~p~~~~~~ 311 (382)
..-. +|.||.++|..++.+.+.
T Consensus 68 -------~~~~~~d~vv~spgi~~~~p~~~ 90 (451)
T 3lk7_A 68 -------LLDEDFCYMIKNPGIPYNNPMVK 90 (451)
T ss_dssp -------GGGSCEEEEEECTTSCTTSHHHH
T ss_pred -------hhcCCCCEEEECCcCCCCChhHH
Confidence 0012 789999999988776554
No 386
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.67 E-value=0.036 Score=45.22 Aligned_cols=31 Identities=19% Similarity=0.107 Sum_probs=29.5
Q ss_pred cccEEEECCcHHHHHHHHHHHHc-CCCeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARA-ELKPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~-g~~v~lie 88 (382)
..+|+|+|.|..|..+|..|.+. |++|+++|
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid 70 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIE 70 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEE
Confidence 46899999999999999999999 99999999
No 387
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.50 E-value=0.033 Score=49.60 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
++|.|||+|.-|...|..|++.|++|+++|+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 5799999999999999999999999999993
No 388
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.46 E-value=0.036 Score=46.69 Aligned_cols=30 Identities=23% Similarity=0.206 Sum_probs=28.7
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
++|+|+|+|..|..+|..|.+.|++|+++|
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid 30 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIIN 30 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 369999999999999999999999999999
No 389
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.17 E-value=0.043 Score=49.06 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=29.1
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
..+|.|||+|.-|...|..++..|++|+|+|
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D 36 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEE
Confidence 4579999999999999999999999999999
No 390
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.91 E-value=0.064 Score=50.79 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=30.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.++|+|+|+|-.|..+|..|...|++|++||+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~ 34 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDK 34 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEES
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 46899999999999999999999999999994
No 391
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.81 E-value=0.14 Score=43.13 Aligned_cols=80 Identities=19% Similarity=0.264 Sum_probs=54.2
Q ss_pred CCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEE
Q 016820 203 FRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVK 282 (382)
Q Consensus 203 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~ 282 (382)
..+++|+|||+|.+|...+..|.+.|.+|+++.+... ..+ +.+.++.+++++... ..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~----~~l-~~l~~~~~i~~i~~~----------------~~-- 85 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVS----AEI-NEWEAKGQLRVKRKK----------------VG-- 85 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCC----HHH-HHHHHTTSCEEECSC----------------CC--
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC----HHH-HHHHHcCCcEEEECC----------------CC--
Confidence 3589999999999999999999999999999986422 222 344445567664221 00
Q ss_pred eccCCceEEEecCeEEEeeCCCCChhhh
Q 016820 283 NLVTGQVSDLKVSGLFFAIGHEPATKFV 310 (382)
Q Consensus 283 ~~~~~~~~~~~~D~vi~~~G~~p~~~~~ 310 (382)
. + .--.+|+||.||+-......+
T Consensus 86 ~---~--dL~~adLVIaAT~d~~~N~~I 108 (223)
T 3dfz_A 86 E---E--DLLNVFFIVVATNDQAVNKFV 108 (223)
T ss_dssp G---G--GSSSCSEEEECCCCTHHHHHH
T ss_pred H---h--HhCCCCEEEECCCCHHHHHHH
Confidence 0 1 112489999999877544433
No 392
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.75 E-value=0.047 Score=51.27 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=31.3
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3689999999999999999999999999999876
No 393
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.74 E-value=0.055 Score=50.45 Aligned_cols=35 Identities=17% Similarity=0.429 Sum_probs=31.5
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
++|+|||+|..|+-+|..|.+.|.+|+++++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 36999999999999999999999999999987543
No 394
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.74 E-value=0.04 Score=48.08 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=30.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..+.|+|||||-.|...+..|.+.|++|+||++
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcC
Confidence 457899999999999999999999999999994
No 395
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=93.73 E-value=0.073 Score=52.84 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=32.1
Q ss_pred cccccEEEECCcHHHHHHHHHHHHc------CCCeEEEecc
Q 016820 56 TLKTKVCIIGSGPAAHTAAIYAARA------ELKPILFEGW 90 (382)
Q Consensus 56 ~~~~~vvIIGaG~aGl~~A~~l~~~------g~~v~lie~~ 90 (382)
...+||||||||.||+++|+.|++. |.+|+||||.
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 3568999999999999999999998 9999999974
No 396
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.69 E-value=0.049 Score=51.27 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=29.9
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.++|+|||.|.+|+++|..|+++|++|+++|.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~ 36 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDT 36 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEES
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEEC
Confidence 36899999999999999999999999999994
No 397
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.61 E-value=0.058 Score=49.75 Aligned_cols=33 Identities=21% Similarity=0.158 Sum_probs=30.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
...+|+|||+|.+|+.+|..|..+|.+|+++|.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~ 221 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDV 221 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcC
Confidence 357899999999999999999999999999994
No 398
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.55 E-value=0.06 Score=50.17 Aligned_cols=34 Identities=29% Similarity=0.327 Sum_probs=31.1
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS 239 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~ 239 (382)
++|+|||+|..|+-+|..|.+.|.+|+++++++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~ 34 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPI 34 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCC
Confidence 3699999999999999999999999999998754
No 399
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.52 E-value=0.064 Score=48.40 Aligned_cols=31 Identities=35% Similarity=0.545 Sum_probs=29.1
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC-CeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL-KPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie 88 (382)
+++|+|||+|..|..+|..|++.|+ +|+|+|
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D 40 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYD 40 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 4689999999999999999999998 999999
No 400
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.25 E-value=0.067 Score=48.94 Aligned_cols=33 Identities=21% Similarity=0.191 Sum_probs=30.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
...+|+|||+|.+|+.+|..|..+|.+|+++|+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~ 215 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDV 215 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeC
Confidence 357899999999999999999999999999994
No 401
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.17 E-value=0.072 Score=47.80 Aligned_cols=30 Identities=13% Similarity=0.174 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
++|+|||+|..|..+|..|++.|++|++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~ 32 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVS 32 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEe
Confidence 579999999999999999999999999998
No 402
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=93.13 E-value=0.071 Score=49.02 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=31.6
Q ss_pred CcEEEEcCCchHHHHHHHHhhc--CCEEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKY--GSKVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~--g~~v~~~~~~~~~ 240 (382)
++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3699999999999999999999 9999999987654
No 403
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.11 E-value=0.085 Score=50.38 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=33.0
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
..++|+|||+|.+|+.+|..|.+.|.+|+++++.+.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 3578999999999999999999999999999876543
No 404
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.10 E-value=0.084 Score=47.31 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=29.4
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.++|.|||+|.-|...|..|++.|++|+++|+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeC
Confidence 46799999999999999999999999999993
No 405
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.09 E-value=0.11 Score=47.18 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=30.6
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRR 237 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~ 237 (382)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 457999999999999999999999999999975
No 406
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.08 E-value=0.12 Score=40.76 Aligned_cols=37 Identities=19% Similarity=0.326 Sum_probs=32.9
Q ss_pred CCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC
Q 016820 203 FRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS 239 (382)
Q Consensus 203 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~ 239 (382)
..+++++|+|+|..|..++..|.+.|.+|+++.+.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3468999999999999999999999999999988653
No 407
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.96 E-value=0.085 Score=48.17 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEecc
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEGW 90 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~ 90 (382)
++|+|+|||..|..+++.++++|++|+++|..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~ 33 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKN 33 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999953
No 408
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.93 E-value=0.097 Score=47.27 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=29.3
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
.++|.|||+|..|..+|..|++.|++|++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~ 33 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLA 33 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 3589999999999999999999999999998
No 409
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=92.92 E-value=0.083 Score=50.08 Aligned_cols=35 Identities=23% Similarity=0.500 Sum_probs=31.6
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCC--EEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGS--KVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~--~v~~~~~~~~~ 240 (382)
++|+|||+|.+|+-.|..|.+.|. +|++++.++.+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 579999999999999999999999 99999876544
No 410
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.86 E-value=0.095 Score=46.10 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
++|.|||+|..|...|..|++.|++|+++|+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 5799999999999999999999999999993
No 411
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.81 E-value=0.083 Score=47.19 Aligned_cols=30 Identities=13% Similarity=0.204 Sum_probs=28.3
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
++|.|||+|..|..+|..|++.|++|++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~ 32 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLL 32 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEE
Confidence 579999999999999999999999999998
No 412
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.71 E-value=0.09 Score=45.31 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=30.0
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC-CeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL-KPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie~ 89 (382)
...+|+|||+|..|..+|..|++.|. +++|+|.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~ 63 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF 63 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 35789999999999999999999997 8999994
No 413
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.71 E-value=0.098 Score=48.72 Aligned_cols=36 Identities=28% Similarity=0.560 Sum_probs=32.7
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcC-CEEEEEEeCCCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYG-SKVYIIHRRDSF 240 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g-~~v~~~~~~~~~ 240 (382)
..+|+|||+|..|+-.|..|.+.| .+|+++++.+.+
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 568999999999999999999999 899999987654
No 414
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.70 E-value=0.1 Score=46.10 Aligned_cols=31 Identities=26% Similarity=0.270 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
++|+|||+|..|..+|..|.+.|++|+++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r 33 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGR 33 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEES
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEe
Confidence 5899999999999999999999999999995
No 415
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.68 E-value=0.098 Score=47.80 Aligned_cols=33 Identities=15% Similarity=0.146 Sum_probs=30.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC-CeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL-KPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie~ 89 (382)
.+.+|||+|||.+|+.+|..|...|. +|+++|+
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~ 220 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDK 220 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEET
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEEC
Confidence 45789999999999999999999999 9999994
No 416
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.62 E-value=0.13 Score=47.29 Aligned_cols=37 Identities=22% Similarity=0.451 Sum_probs=33.4
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeC-CCC
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRR-DSF 240 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~-~~~ 240 (382)
...+|+|||+|.+|+-+|..|.+.|.+|++++++ +.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 4678999999999999999999999999999988 544
No 417
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.62 E-value=0.098 Score=46.81 Aligned_cols=31 Identities=32% Similarity=0.476 Sum_probs=29.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC--CeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL--KPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~--~v~lie 88 (382)
.++|+|||+|..|..+|..|++.|+ +|+++|
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d 39 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLED 39 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 3589999999999999999999998 999999
No 418
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.57 E-value=0.087 Score=49.19 Aligned_cols=34 Identities=32% Similarity=0.500 Sum_probs=31.3
Q ss_pred cEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 207 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
+|+|||+|..|+-.|..|.+.|.+|+++++++.+
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6999999999999999999999999999987654
No 419
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.56 E-value=0.091 Score=50.27 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=31.4
Q ss_pred CcEEEEcCCchHHHHHHHHhhc-CCEEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~-g~~v~~~~~~~~~ 240 (382)
-.|+|||+|.+|+-+|..|.+. |.+|++++.++.+
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 4699999999999999999874 9999999988766
No 420
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.52 E-value=0.13 Score=48.98 Aligned_cols=37 Identities=30% Similarity=0.411 Sum_probs=33.4
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
...+|+|||+|..|+-+|..|.+.|.+|+++++.+.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 3568999999999999999999999999999887654
No 421
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.49 E-value=0.12 Score=48.47 Aligned_cols=32 Identities=13% Similarity=0.147 Sum_probs=30.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
...+|.|||.|+.|+.+|..|++.|++|+.+|
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~D 51 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYD 51 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEE
Confidence 45689999999999999999999999999999
No 422
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.45 E-value=0.098 Score=49.59 Aligned_cols=39 Identities=23% Similarity=0.374 Sum_probs=32.5
Q ss_pred CCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 202 IFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 202 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
.....+|+|||+|.+|+-+|..|.+.|.+|+++++.+.+
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 344678999999999999999999999999999988754
No 423
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.41 E-value=0.14 Score=44.66 Aligned_cols=36 Identities=25% Similarity=0.439 Sum_probs=33.0
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCC
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDS 239 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~ 239 (382)
.+++|+|||+|.+|...+..|.+.|++|+++.....
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 578999999999999999999999999999987643
No 424
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.39 E-value=0.11 Score=47.93 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=30.7
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
++|+|||+|..|++.|..+++.|.+|+++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999998765
No 425
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.37 E-value=0.11 Score=48.18 Aligned_cols=32 Identities=28% Similarity=0.227 Sum_probs=29.9
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..+|+|||+|.+|+.+|..++.+|.+|+++|.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~ 203 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDT 203 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 57899999999999999999999999999994
No 426
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.28 E-value=0.12 Score=48.76 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=34.1
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR 241 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~ 241 (382)
..+|+|||+|..|+-+|..|.+.|++|+++++++.+.
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 3579999999999999999999999999999998773
No 427
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.25 E-value=0.11 Score=49.41 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=30.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.++|.|||.|..|+.+|..|++.|++|+++|.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEEC
Confidence 46899999999999999999999999999985
No 428
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.08 E-value=0.14 Score=45.70 Aligned_cols=32 Identities=34% Similarity=0.525 Sum_probs=29.7
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC-CeEEEe
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL-KPILFE 88 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie 88 (382)
...+|.|||+|..|..+|..|+..|+ +++|+|
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D 39 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVD 39 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 34689999999999999999999999 999999
No 429
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.05 E-value=0.12 Score=45.84 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
++|.|||+|..|..+|..|.+.|++|+++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEEC
Confidence 4799999999999999999999999999983
No 430
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.01 E-value=0.12 Score=48.64 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
++|.|||.|..|+.+|..|++.|++|+++|.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~ 33 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDT 33 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEEC
Confidence 5799999999999999999999999999995
No 431
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=91.99 E-value=0.12 Score=49.68 Aligned_cols=36 Identities=33% Similarity=0.542 Sum_probs=32.0
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
..+|+|||+|..|+.+|..|.+.|.+|++++.++.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 357999999999999999999999999999876544
No 432
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.95 E-value=0.16 Score=47.34 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=30.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..+|+|||.|..|..+|..|.+.|++|++||.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~ 35 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDH 35 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 46899999999999999999999999999995
No 433
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.94 E-value=0.13 Score=47.36 Aligned_cols=33 Identities=21% Similarity=0.156 Sum_probs=30.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
...+|+|+|+|.+|+.++..++.+|.+|+++|+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~ 203 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDV 203 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 457899999999999999999999999999983
No 434
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.93 E-value=0.15 Score=44.62 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=28.5
Q ss_pred cEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 60 KVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 60 ~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
+|.|||+|..|..+|..|.+.|++|+++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEc
Confidence 699999999999999999999999999984
No 435
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.92 E-value=0.14 Score=45.80 Aligned_cols=31 Identities=32% Similarity=0.474 Sum_probs=29.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC--CeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL--KPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~--~v~lie 88 (382)
+.+|+|||+|..|..+|..|+..+. +++|+|
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~D 39 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLID 39 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 4689999999999999999999987 899999
No 436
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=91.90 E-value=0.16 Score=46.74 Aligned_cols=36 Identities=31% Similarity=0.437 Sum_probs=33.1
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR 241 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~ 241 (382)
.+|+|||+|.+|+.+|..|.+.|.+|+++++++.+.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 479999999999999999999999999999987764
No 437
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.89 E-value=0.13 Score=45.98 Aligned_cols=32 Identities=19% Similarity=0.385 Sum_probs=28.6
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC--CeEEEe
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL--KPILFE 88 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~--~v~lie 88 (382)
.+.+|+|||+|..|..+|..|...+. ++.|+|
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~D 38 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIID 38 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 44689999999999999999998884 799998
No 438
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.86 E-value=0.14 Score=45.60 Aligned_cols=29 Identities=28% Similarity=0.349 Sum_probs=27.8
Q ss_pred cEEEECCcHHHHHHHHHHHHcCC--CeEEEe
Q 016820 60 KVCIIGSGPAAHTAAIYAARAEL--KPILFE 88 (382)
Q Consensus 60 ~vvIIGaG~aGl~~A~~l~~~g~--~v~lie 88 (382)
+|+|||+|..|..+|..|+..|+ +|+++|
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D 32 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVD 32 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 69999999999999999999998 999999
No 439
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.75 E-value=0.16 Score=46.33 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=30.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..++|.|||+|.-|..+|..|++.|++|+++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r 60 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSY 60 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeC
Confidence 346899999999999999999999999999983
No 440
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.74 E-value=0.21 Score=39.20 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=31.1
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
.++++|+|+|..|..++..|.+.|.+|+++.+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999998863
No 441
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.73 E-value=0.17 Score=42.93 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=29.7
Q ss_pred ccccEEEECC-cHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGS-GPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGa-G~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..+.|+|.|| |..|..++..|.+.|++|+++.+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC
Confidence 4578999997 99999999999999999999984
No 442
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=91.72 E-value=0.078 Score=50.02 Aligned_cols=35 Identities=20% Similarity=0.370 Sum_probs=31.8
Q ss_pred CcEEEEcCCchHHHHHHHHhhcC------CEEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYG------SKVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g------~~v~~~~~~~~~ 240 (382)
++|+|||+|.+|+-+|..|.+.| .+|+++++.+.+
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 57999999999999999999999 899999987544
No 443
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.71 E-value=0.2 Score=38.76 Aligned_cols=35 Identities=11% Similarity=0.019 Sum_probs=32.0
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
..++++|+|.|..|..++..|.+.|.+|+++++.+
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35789999999999999999999999999999864
No 444
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.69 E-value=0.16 Score=46.42 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=29.7
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..+|+|+|+|.+|..++..|+.+|.+|+++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr 198 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDI 198 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 37899999999999999999999999999983
No 445
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.62 E-value=0.13 Score=46.65 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=29.7
Q ss_pred cEEEEcCCchHHHHHHHHhhcC------CEEEEEEeCC
Q 016820 207 PLAVIGGGDSAMEEANFLTKYG------SKVYIIHRRD 238 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~g------~~v~~~~~~~ 238 (382)
+|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999997 8999999874
No 446
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=91.55 E-value=0.13 Score=49.07 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=56.1
Q ss_pred CCCcEEEEcCCchHHH-HHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEEE
Q 016820 204 RDKPLAVIGGGDSAME-EANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKVK 282 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e-~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~~ 282 (382)
..++|.|||-|-+|+. +|..|.+.|.+|+..+..... . .+.|++.|++++.+... .
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~-----~-~~~l~~~gi~~~~g~~~-----~------------ 77 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNS-----V-TQHLTALGAQIYFHHRP-----E------------ 77 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCH-----H-HHHHHHTTCEEESSCCG-----G------------
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCH-----H-HHHHHHCCCEEECCCCH-----H------------
Confidence 3589999999999996 899999999999998876431 1 13466679988765210 0
Q ss_pred eccCCceEEEecCeEEEeeCCCCChhhhc
Q 016820 283 NLVTGQVSDLKVSGLFFAIGHEPATKFVD 311 (382)
Q Consensus 283 ~~~~~~~~~~~~D~vi~~~G~~p~~~~~~ 311 (382)
....+|.||.++|..++.+.+.
T Consensus 78 -------~~~~~d~vV~Spgi~~~~p~~~ 99 (494)
T 4hv4_A 78 -------NVLDASVVVVSTAISADNPEIV 99 (494)
T ss_dssp -------GGTTCSEEEECTTSCTTCHHHH
T ss_pred -------HcCCCCEEEECCCCCCCCHHHH
Confidence 0114799999999988766543
No 447
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.52 E-value=0.16 Score=45.63 Aligned_cols=30 Identities=30% Similarity=0.585 Sum_probs=28.6
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCC-CeEEEe
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAEL-KPILFE 88 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie 88 (382)
++|+|||+|..|..+|..|+..|+ +|+|+|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~D 45 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFD 45 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 589999999999999999999998 999999
No 448
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.52 E-value=0.16 Score=46.30 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=30.4
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC-CeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL-KPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie~ 89 (382)
.+.+|||+|+|.+|..+|..|...|. +|+++|+
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr 224 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDR 224 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEET
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEEC
Confidence 45789999999999999999999998 7999994
No 449
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.41 E-value=0.17 Score=46.27 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=29.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
....|+|+|+|..|..+|..|+..|++|++++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d 196 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILD 196 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEE
Confidence 34789999999999999999999999999999
No 450
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.35 E-value=0.16 Score=46.06 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
++|.|||+|..|..+|..|++.|++|+++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 5899999999999999999999999999983
No 451
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.33 E-value=0.16 Score=45.40 Aligned_cols=31 Identities=32% Similarity=0.323 Sum_probs=27.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEE
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILF 87 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~li 87 (382)
..++|.|||+|..|..+|..|++.|++|+++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 3568999999999999999999999999988
No 452
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.32 E-value=0.22 Score=43.48 Aligned_cols=33 Identities=15% Similarity=0.030 Sum_probs=30.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEecc
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEGW 90 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~~ 90 (382)
.++|+|.|+|..|..++..|.+.|++|+++.+.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999853
No 453
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.31 E-value=0.22 Score=46.58 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=31.8
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCC-EEEEEEeCCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGS-KVYIIHRRDS 239 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~-~v~~~~~~~~ 239 (382)
..+|+|||+|..|+-+|..|++.|. +|+++++.+.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 3579999999999999999999999 9999998764
No 454
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.30 E-value=0.19 Score=41.99 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=29.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..++|.|||+|..|..+|..|.+.|++|+++++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 346899999999999999999999999999985
No 455
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.30 E-value=0.18 Score=48.08 Aligned_cols=36 Identities=31% Similarity=0.338 Sum_probs=33.1
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 468999999999999999999999999999988765
No 456
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=91.29 E-value=0.15 Score=45.73 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCcEEEEcCCchHHHHHHHHhh--cCCEEEEEEeCCCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTK--YGSKVYIIHRRDSF 240 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~--~g~~v~~~~~~~~~ 240 (382)
...|+|||+|+.|+..|.+|.+ .|.+|+++++.+.+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 4579999999999999999974 59999999987654
No 457
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=91.28 E-value=0.14 Score=49.21 Aligned_cols=36 Identities=25% Similarity=0.500 Sum_probs=32.3
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcC-CEEEEEEeCCCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYG-SKVYIIHRRDSF 240 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g-~~v~~~~~~~~~ 240 (382)
..+|+|||+|..|+-+|..|.+.| .+|++++.++++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 357999999999999999999999 999999877654
No 458
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.23 E-value=0.2 Score=38.24 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.1
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
..+++|+|+|..|..++..|.+.|.+|+++.+.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999998753
No 459
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.16 E-value=0.18 Score=45.19 Aligned_cols=31 Identities=19% Similarity=0.342 Sum_probs=28.7
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC--CeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL--KPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~--~v~lie 88 (382)
..+|+|||+|..|.++|..|+..|+ +++++|
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D 37 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVID 37 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEe
Confidence 4689999999999999999999987 899999
No 460
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.02 E-value=0.26 Score=41.31 Aligned_cols=32 Identities=28% Similarity=0.286 Sum_probs=29.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.++|.|||+|..|...|..|.+.|++|+++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeC
Confidence 35799999999999999999999999999983
No 461
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.97 E-value=0.2 Score=38.58 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=31.1
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
.++++|+|+|..|..++..|.+.|.+|+++++.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999998864
No 462
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.96 E-value=0.08 Score=41.23 Aligned_cols=31 Identities=23% Similarity=0.302 Sum_probs=28.7
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
.++|+|||+|..|..+|..|.+.|++|++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~ 51 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAG 51 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEc
Confidence 5689999999999999999999999988888
No 463
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.96 E-value=0.15 Score=45.36 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=28.8
Q ss_pred cccEEEECCcHHHHHHHHHHHHc-----C-CCeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARA-----E-LKPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~-----g-~~v~lie 88 (382)
+++|.|||+|..|..+|..|.+. | ++|++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 35899999999999999999999 9 9999998
No 464
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.93 E-value=0.21 Score=45.92 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=29.9
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEe
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFE 88 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie 88 (382)
....|+|+|+|..|..+|..++.+|.+|++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d 198 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLD 198 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 35789999999999999999999999999999
No 465
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.89 E-value=0.19 Score=44.73 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=28.1
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
++|+|||+|..|..+|..|. .|.+|+++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r 32 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTR 32 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEEC
Confidence 57999999999999999999 9999999983
No 466
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.87 E-value=0.19 Score=44.94 Aligned_cols=30 Identities=30% Similarity=0.571 Sum_probs=28.6
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCC-CeEEEe
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAEL-KPILFE 88 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie 88 (382)
++|+|||+|..|..+|..|++.|+ +|+++|
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D 35 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFD 35 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 579999999999999999999998 999999
No 467
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.86 E-value=0.28 Score=46.05 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=41.3
Q ss_pred CCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcC
Q 016820 204 RDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 261 (382)
Q Consensus 204 ~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~ 261 (382)
.+++|.|||.|.+|+..|..|.+.|.+|+.++.+...+.. ..++ .|+++..+
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~-----~~l~-~G~~~~~g 55 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL-----DKLP-EAVERHTG 55 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTG-----GGSC-TTSCEEES
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchh-----HHhh-CCCEEEEC
Confidence 5689999999999999999999999999999887654322 2355 67777644
No 468
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=90.82 E-value=0.18 Score=47.38 Aligned_cols=35 Identities=34% Similarity=0.556 Sum_probs=31.5
Q ss_pred CcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
.+|+|||+|..|+.+|..|.+.|.+|+++++++.+
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 47999999999999999999999999999877544
No 469
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=90.76 E-value=0.22 Score=46.08 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=33.3
Q ss_pred CCcEEEEcCCchHHHHHHHHhhc-CCEEEEEEeCCCCc
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRDSFR 241 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~-g~~v~~~~~~~~~~ 241 (382)
..+|+|||+|..|+-+|..|.+. |.+|++++.++.+.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45799999999999999999998 99999999887663
No 470
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=90.75 E-value=0.19 Score=46.44 Aligned_cols=37 Identities=24% Similarity=0.340 Sum_probs=33.3
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCCc
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFR 241 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~~ 241 (382)
..+++|||+|.+|+-+|..|.+.|.+|+++++++.+.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 4579999999999999999999999999999887663
No 471
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=90.74 E-value=0.23 Score=44.25 Aligned_cols=32 Identities=13% Similarity=0.238 Sum_probs=29.9
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.++|.|||.|..|..+|..|.+.|++|+++++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeC
Confidence 46899999999999999999999999999994
No 472
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.74 E-value=0.22 Score=44.60 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=28.3
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCC-CeEEEe
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAEL-KPILFE 88 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie 88 (382)
++|+|||+|..|..+|..|+..|+ +|+|+|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~D 35 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFD 35 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 579999999999999999999998 999999
No 473
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.73 E-value=0.21 Score=44.46 Aligned_cols=30 Identities=37% Similarity=0.560 Sum_probs=28.1
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCC-CeEEEe
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAEL-KPILFE 88 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie 88 (382)
++|+|||+|..|..+|..|+..|+ +++|+|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~D 33 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLD 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Confidence 579999999999999999999996 899999
No 474
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.65 E-value=0.27 Score=42.75 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=29.7
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.++++|||+|.+|-.++..|.+.|.+|+++.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nR 149 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNR 149 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 57899999999999999999999999999984
No 475
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=90.64 E-value=0.37 Score=46.34 Aligned_cols=81 Identities=9% Similarity=0.026 Sum_probs=56.6
Q ss_pred CCCCcEEEEcCCchHHH-HHHHHhhcCCEEEEEEeCCCCcchHHHHHHhccCCCcEEEcCceeEEEEecCCceeeeeEEE
Q 016820 203 FRDKPLAVIGGGDSAME-EANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWNSVVLEAYGEGDKKVLGGLKV 281 (382)
Q Consensus 203 ~~~~~v~VvG~G~~a~e-~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~g~~~~~v~~ 281 (382)
+..++|.|||-|-+|+. +|..|.+.|.+|+..+.+...+. .+.|++.|++++.+... ..
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~-----~~~L~~~gi~~~~G~~~-----~~---------- 76 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPM-----STQLEQAGVTIEEGYLI-----AH---------- 76 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTH-----HHHHHHTTCEEEESCCG-----GG----------
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHH-----HHHHHHCCCEEECCCCH-----HH----------
Confidence 45689999999999997 58888999999999988754321 23455678887654211 00
Q ss_pred EeccCCceEEEecCeEEEeeCCCCChhhhc
Q 016820 282 KNLVTGQVSDLKVSGLFFAIGHEPATKFVD 311 (382)
Q Consensus 282 ~~~~~~~~~~~~~D~vi~~~G~~p~~~~~~ 311 (382)
....+|.||.++|..+..+.+.
T Consensus 77 --------~~~~~d~vV~Spgi~~~~p~l~ 98 (524)
T 3hn7_A 77 --------LQPAPDLVVVGNAMKRGMDVIE 98 (524)
T ss_dssp --------GCSCCSEEEECTTCCTTSHHHH
T ss_pred --------cCCCCCEEEECCCcCCCCHHHH
Confidence 0124799999999988776554
No 476
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.60 E-value=0.23 Score=44.52 Aligned_cols=31 Identities=39% Similarity=0.570 Sum_probs=29.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC-CeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL-KPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie 88 (382)
..+|+|||+|..|.++|..|+..|+ +++|+|
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~D 38 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFD 38 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 4689999999999999999999998 999999
No 477
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.54 E-value=0.22 Score=44.81 Aligned_cols=33 Identities=15% Similarity=0.255 Sum_probs=30.1
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.+++|.|||+|.-|..+|..|.+.|++|+++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 457899999999999999999999999999983
No 478
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.52 E-value=0.3 Score=44.80 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=30.5
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..+.|.|||+|..|..++..++++|++|+++++
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~ 43 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDP 43 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 346899999999999999999999999999995
No 479
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.52 E-value=0.21 Score=36.83 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=30.4
Q ss_pred CCcEEEEcCCchHHHHHHHHhhcC-CEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTKYG-SKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~~g-~~v~~~~~~~ 238 (382)
.++++|+|+|..|..++..|.+.| .+|+++.|.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8899888853
No 480
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=90.52 E-value=0.22 Score=45.56 Aligned_cols=34 Identities=29% Similarity=0.403 Sum_probs=31.6
Q ss_pred cEEEEcCCchHHHHHHHHhhcCCEEEEEEeCCCC
Q 016820 207 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSF 240 (382)
Q Consensus 207 ~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~~~ 240 (382)
+++|||+|..|+-+|..|.+.|.+|+++++++.+
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 6899999999999999999999999999988765
No 481
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.50 E-value=0.2 Score=47.34 Aligned_cols=35 Identities=17% Similarity=0.404 Sum_probs=31.8
Q ss_pred CcEEEEcCCchHHHHHHHHhhcC--CEEEEEEeCCCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTKYG--SKVYIIHRRDSF 240 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~~g--~~v~~~~~~~~~ 240 (382)
.+|+|||+|.+|+-+|..|.+.| .+|+++++.+.+
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 57999999999999999999999 999999986653
No 482
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=90.41 E-value=0.27 Score=47.70 Aligned_cols=34 Identities=21% Similarity=0.437 Sum_probs=31.1
Q ss_pred CCcEEEEcCCchHHHHHHHHhh---cCCEEEEEEeCC
Q 016820 205 DKPLAVIGGGDSAMEEANFLTK---YGSKVYIIHRRD 238 (382)
Q Consensus 205 ~~~v~VvG~G~~a~e~a~~l~~---~g~~v~~~~~~~ 238 (382)
..+|+|||+|..|+-+|..|.+ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 899999999754
No 483
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.38 E-value=0.2 Score=46.70 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=29.2
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..++|.|||.|..|+.+|..|++ |++|+++|.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~ 66 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDI 66 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEec
Confidence 44689999999999999999998 999999994
No 484
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.37 E-value=0.23 Score=43.30 Aligned_cols=31 Identities=16% Similarity=0.030 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 59 TKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 59 ~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
++|+|.|+|..|..++..|.+.|++|+++.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 36 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSR 36 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEES
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEc
Confidence 6799999999999999999999999999984
No 485
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.35 E-value=0.18 Score=47.29 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=28.5
Q ss_pred cEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 60 KVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 60 ~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
+|.|||+|..|+.+|..|++.|++|+++|.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 699999999999999999999999999984
No 486
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=90.27 E-value=0.91 Score=41.28 Aligned_cols=37 Identities=11% Similarity=0.278 Sum_probs=32.6
Q ss_pred CCCCCcEEEEcCCchHHHHHHHHhhcCCEEEEEEeCC
Q 016820 202 IFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 238 (382)
Q Consensus 202 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~v~~~~~~~ 238 (382)
...++++.|||-|.+|..+|..+...|.+|+.+.+..
T Consensus 173 ~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~ 209 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL 209 (365)
T ss_dssp CSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS
T ss_pred ccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCC
Confidence 4468999999999999999999999999998887653
No 487
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.24 E-value=0.28 Score=46.09 Aligned_cols=32 Identities=9% Similarity=0.207 Sum_probs=30.2
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..++.|||.|.-|+.+|..|++.|++|+++|.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 46899999999999999999999999999995
No 488
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.07 E-value=0.26 Score=43.68 Aligned_cols=32 Identities=28% Similarity=0.173 Sum_probs=29.8
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.++|.|||.|..|...|..|.+.|++|+++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEEC
Confidence 46899999999999999999999999999983
No 489
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=90.05 E-value=0.51 Score=44.82 Aligned_cols=54 Identities=13% Similarity=0.081 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHcC-cEEEEe-eEEEEEecCCcEEEEECCe-EEEcCEEEEccCCC
Q 016820 120 GDLMDRCRNQSLRFG-TQIFTE-TVSKVDFKSRPFKVFTDSK-SVLADTVIVATGAV 173 (382)
Q Consensus 120 ~~~~~~~~~~~~~~g-i~~~~~-~v~~i~~~~~~~~v~~~~~-~~~~d~lvlA~G~~ 173 (382)
..+.+.+.+.+.+.| ++++.+ .|++|+.+++.+.+.+.++ ++.+|+||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 456666777777777 888888 6999998877888887654 69999999999963
No 490
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.03 E-value=0.22 Score=47.17 Aligned_cols=32 Identities=28% Similarity=0.335 Sum_probs=30.1
Q ss_pred cccEEEECCcHHHHHHHHHHHHc-CC-CeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARA-EL-KPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~-g~-~v~lie~ 89 (382)
.++|.|||+|.-|+.+|..|++. |+ +|+++|.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~ 51 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQR 51 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 46899999999999999999999 99 9999995
No 491
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.02 E-value=0.28 Score=43.88 Aligned_cols=31 Identities=29% Similarity=0.509 Sum_probs=28.7
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC-CeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL-KPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie 88 (382)
..+|+|||+|..|.++|..|+..++ +++|+|
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~D 36 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFD 36 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 4689999999999999999999888 999999
No 492
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.00 E-value=0.22 Score=41.89 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=28.6
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEE-Ee
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPIL-FE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~l-ie 88 (382)
.++|.|||+|..|..+|..|.+.|++|++ ++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANS 54 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEEC
Confidence 46899999999999999999999999998 66
No 493
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.97 E-value=0.24 Score=44.17 Aligned_cols=33 Identities=24% Similarity=0.198 Sum_probs=29.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCC-CeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAEL-KPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~lie~ 89 (382)
..++|.|||.|..|..+|..|.+.|+ +|+++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcC
Confidence 34689999999999999999999999 9999983
No 494
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.97 E-value=0.28 Score=43.86 Aligned_cols=31 Identities=16% Similarity=0.333 Sum_probs=27.9
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCC--CeEEEe
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAEL--KPILFE 88 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~--~v~lie 88 (382)
..+|+|||+|..|.++|..|+..+. +++++|
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~D 38 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLID 38 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 4689999999999999999988875 799998
No 495
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.91 E-value=0.26 Score=43.45 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=29.3
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..++|.|||+|.-|...|..|+ .|++|+++|+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~ 42 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDV 42 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECS
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEEC
Confidence 4588999999999999999999 9999999993
No 496
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.88 E-value=0.27 Score=43.82 Aligned_cols=29 Identities=28% Similarity=0.466 Sum_probs=27.2
Q ss_pred cEEEECCcHHHHHHHHHHHHc--CCCeEEEe
Q 016820 60 KVCIIGSGPAAHTAAIYAARA--ELKPILFE 88 (382)
Q Consensus 60 ~vvIIGaG~aGl~~A~~l~~~--g~~v~lie 88 (382)
+|+|||+|..|..+|..|++. |.+|+++|
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D 32 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLD 32 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 699999999999999999985 78999999
No 497
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=89.88 E-value=0.2 Score=48.02 Aligned_cols=33 Identities=18% Similarity=0.459 Sum_probs=29.3
Q ss_pred CcEEEEcCCchHHHHHHHHhh---cCCEEEEEEeCC
Q 016820 206 KPLAVIGGGDSAMEEANFLTK---YGSKVYIIHRRD 238 (382)
Q Consensus 206 ~~v~VvG~G~~a~e~a~~l~~---~g~~v~~~~~~~ 238 (382)
.+|+|||+|..|+-+|..|.+ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 479999999999999999999 999999998764
No 498
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.88 E-value=0.28 Score=42.72 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=29.3
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.+.++|+|+|.+|..+|..|.+.|.+|+++++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R 150 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNR 150 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEEC
Confidence 46899999999999999999999999999983
No 499
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.83 E-value=0.27 Score=46.45 Aligned_cols=33 Identities=18% Similarity=0.122 Sum_probs=30.8
Q ss_pred ccccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 57 LKTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 57 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
..++|+|||+|..|...+..|.+.|.+|+++++
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~ 43 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNAL 43 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcC
Confidence 457899999999999999999999999999996
No 500
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.81 E-value=0.25 Score=43.61 Aligned_cols=32 Identities=16% Similarity=0.091 Sum_probs=30.0
Q ss_pred cccEEEECCcHHHHHHHHHHHHcCCCeEEEec
Q 016820 58 KTKVCIIGSGPAAHTAAIYAARAELKPILFEG 89 (382)
Q Consensus 58 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~lie~ 89 (382)
.++|.|||.|..|...|..|++.|++|+++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 46899999999999999999999999999994
Done!