Query 016821
Match_columns 382
No_of_seqs 188 out of 373
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 04:21:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016821.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016821hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bi6h1 g.3.12.1 (H:8-31) Brom 9.5 38 0.0027 19.8 0.4 10 318-327 5-14 (26)
2 d2q07a1 b.122.1.1 (A:460-527) 9.2 53 0.0039 23.1 1.3 26 308-335 6-31 (68)
3 d2o5aa1 d.218.1.12 (A:2-114) U 8.3 2.1E+02 0.015 21.5 4.7 30 116-145 53-84 (113)
4 d1muja1 b.1.1.2 (A:84-183) Cla 7.4 74 0.0054 23.3 1.5 25 131-157 69-93 (100)
5 d1qnta2 c.55.7.1 (A:6-91) O6-a 7.4 28 0.002 26.2 -1.1 9 149-157 77-85 (86)
6 d1vg0a2 d.16.1.6 (A:445-557) R 7.4 89 0.0065 23.8 1.9 20 182-202 44-63 (113)
7 d1oz9a_ d.92.1.15 (A:) Hypothe 7.0 1.1E+02 0.0083 23.9 2.5 37 114-150 46-91 (141)
8 d1i8ya_ g.3.16.1 (A:) N-termin 6.9 64 0.0046 19.1 0.6 7 190-196 7-13 (28)
9 d2o62a1 b.60.1.9 (A:133-269) U 6.9 1.3E+02 0.0091 23.6 2.7 25 281-309 100-124 (137)
10 d1xsza2 d.129.9.1 (A:198-354) 6.7 89 0.0065 25.1 1.7 16 245-260 72-87 (157)
No 1
>d2bi6h1 g.3.12.1 (H:8-31) Bromelain inhibitor VI (cysteine protease inhibitor) {Pineapple (Ananas comosus) [TaxId: 4615]}
Probab=9.53 E-value=38 Score=19.76 Aligned_cols=10 Identities=40% Similarity=0.720 Sum_probs=7.7
Q ss_pred cCCCceEEec
Q 016821 318 LLCSGFVQTN 327 (382)
Q Consensus 318 l~CpGFVQvs 327 (382)
.+||||-.+-
T Consensus 5 sdcpgfcktc 14 (26)
T d2bi6h1 5 SDCPGFCKTC 14 (26)
T ss_dssp SSCCTTCSSB
T ss_pred ccCchHHHHH
Confidence 3699998764
No 2
>d2q07a1 b.122.1.1 (A:460-527) Uncharacterized protein AF0587 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=9.25 E-value=53 Score=23.10 Aligned_cols=26 Identities=12% Similarity=0.475 Sum_probs=21.7
Q ss_pred CCCCcccccccCCCceEEecCccccCcc
Q 016821 308 DAYQATGCYNLLCSGFVQTNNRIAIGAA 335 (382)
Q Consensus 308 D~y~~TGCYNl~CpGFVQvs~~I~lG~~ 335 (382)
|.+...| |+.+||.+..+.+|.+|..
T Consensus 6 ddfv~~G--~v~apgI~~~d~~I~~GD~ 31 (68)
T d2q07a1 6 GDFEVKG--TIFAGGVLRADEKIRPNDV 31 (68)
T ss_dssp CSSCCCS--EEEGGGEEEECTTCCTTCE
T ss_pred CCcccCC--cccccchhhhCCCCCCCCE
Confidence 3466678 9999999999999999864
No 3
>d2o5aa1 d.218.1.12 (A:2-114) Uncharacterized protein BH1328 {Bacillus halodurans [TaxId: 86665]}
Probab=8.34 E-value=2.1e+02 Score=21.49 Aligned_cols=30 Identities=7% Similarity=-0.007 Sum_probs=22.1
Q ss_pred HHHHHHHhhcCCcceEEeCCCCC--eEEeeec
Q 016821 116 FIRAHLNKINKPAVKTIQSPDGD--IIDCVET 145 (382)
Q Consensus 116 ~i~~~Lk~iNKp~vKTIqs~DGD--iiDCVdI 145 (382)
.|++.||..+.++.+.-..++++ ++||.|+
T Consensus 53 ~v~~~~k~~~~~~~~~eG~~~~~WvliD~gdv 84 (113)
T d2o5aa1 53 ELKKVAQEQGIEIKRLEGYEQARWVLIDLGDV 84 (113)
T ss_dssp HHHHHHHHTTCCCCEEESTTTTSEEEEECSSE
T ss_pred HHHHHHHHhccccccccCCCCCCEEEeeCCCE
Confidence 47888998888877665566666 5888776
No 4
>d1muja1 b.1.1.2 (A:84-183) Class II MHC alpha chain, C-terminal domain {Mouse (Mus musculus), I-A group [TaxId: 10090]}
Probab=7.44 E-value=74 Score=23.25 Aligned_cols=25 Identities=40% Similarity=0.632 Sum_probs=18.3
Q ss_pred EEeCCCCCeEEeeecCCCCCCCCCCCC
Q 016821 131 TIQSPDGDIIDCVETHLQPAFDHPKLK 157 (382)
Q Consensus 131 TIqs~DGDiiDCVdI~kQPAfdHPLLK 157 (382)
++...+|++|.|+=-| +++..|+.+
T Consensus 69 ~v~~~~~~~ytC~V~H--~sl~~pi~~ 93 (100)
T d1muja1 69 TFIPSDDDIYDCKVEH--WGLEEPVLK 93 (100)
T ss_dssp EECCCTTCCEEEEEEC--TTSSSCEEE
T ss_pred EEcCCCCCEEEEEEEE--CCCCCceee
Confidence 4556789999999865 576666654
No 5
>d1qnta2 c.55.7.1 (A:6-91) O6-alkylguanine-DNA alkyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.42 E-value=28 Score=26.21 Aligned_cols=9 Identities=44% Similarity=1.028 Sum_probs=7.5
Q ss_pred CCCCCCCCC
Q 016821 149 PAFDHPKLK 157 (382)
Q Consensus 149 PAfdHPLLK 157 (382)
|||+||+|.
T Consensus 77 PalHhp~~q 85 (86)
T d1qnta2 77 PALHHPVFQ 85 (86)
T ss_dssp CCBCCHHHH
T ss_pred Ccccchhhc
Confidence 999999864
No 6
>d1vg0a2 d.16.1.6 (A:445-557) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=7.36 E-value=89 Score=23.79 Aligned_cols=20 Identities=30% Similarity=0.393 Sum_probs=12.4
Q ss_pred eeeccCCCCCCCCceeeeecC
Q 016821 182 QLWSFSGESCPEGTIPIRRTT 202 (382)
Q Consensus 182 q~w~~~g~~CP~GTVPIrRtt 202 (382)
++-...| .||+|.==+-=+|
T Consensus 44 ~~ss~~~-vCP~G~yv~~~St 63 (113)
T d1vg0a2 44 ELCSSTM-TCMKGTYLVHLTC 63 (113)
T ss_dssp EECGGGT-SSCTTCEEEEEEE
T ss_pred EecCCcc-cCCCCCEEEEEEE
Confidence 4433445 4999987665555
No 7
>d1oz9a_ d.92.1.15 (A:) Hypothetical protein Aq_1354 {Aquifex aeolicus [TaxId: 63363]}
Probab=6.99 E-value=1.1e+02 Score=23.92 Aligned_cols=37 Identities=22% Similarity=0.361 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhcCCc-ceEEeCCC--------CCeEEeeecCCCCC
Q 016821 114 LKFIRAHLNKINKPA-VKTIQSPD--------GDIIDCVETHLQPA 150 (382)
Q Consensus 114 ~~~i~~~Lk~iNKp~-vKTIqs~D--------GDiiDCVdI~kQPA 150 (382)
.+++.++-...|+|. |-|+...+ |||+=|++.-.+-|
T Consensus 46 i~~LN~~yr~kd~~TDVLSFp~~~~~~~~~~lGdI~Is~~~i~~~a 91 (141)
T d1oz9a_ 46 IRELNKTYRKKDKPTDVLSFPMGEEFGGYKILGDVVISQDTAERQA 91 (141)
T ss_dssp HHHHHHHHHSCCSCCSEEEEECCCEETTEEEEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcceEEecccccccccccccchhccHHHHHHHH
Confidence 446677999999998 88998765 99999998755444
No 8
>d1i8ya_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Carp (Cyprinus carpio) [TaxId: 7962]}
Probab=6.88 E-value=64 Score=19.13 Aligned_cols=7 Identities=57% Similarity=1.355 Sum_probs=5.5
Q ss_pred CCCCCce
Q 016821 190 SCPEGTI 196 (382)
Q Consensus 190 ~CP~GTV 196 (382)
-||+||-
T Consensus 7 icpdgtt 13 (28)
T d1i8ya_ 7 ICPDGTT 13 (28)
T ss_dssp CCCTTCE
T ss_pred EcCCCCe
Confidence 4999984
No 9
>d2o62a1 b.60.1.9 (A:133-269) Uncharacterized protein All1756 ortholog {Nostoc punctiforme [TaxId: 272131]}
Probab=6.85 E-value=1.3e+02 Score=23.62 Aligned_cols=25 Identities=24% Similarity=0.494 Sum_probs=18.6
Q ss_pred cEEEEeeEECccccCCCccEEEEEEccCC
Q 016821 281 NTIEAGWQVSPELYGDNYPRFFTYWTTDA 309 (382)
Q Consensus 281 nsIeaGW~V~P~lYGD~~pRlFtyWT~D~ 309 (382)
-.+|+||-|.| |.+-||--.|...|
T Consensus 100 F~~E~gwL~~~----~rR~RLVr~yd~~G 124 (137)
T d2o62a1 100 LFLEAGWLIQS----DLRQRMIRSYNDKG 124 (137)
T ss_dssp EEEEEEEEEET----TEEEEEEEEECTTS
T ss_pred ceEEEEeeeCc----chhhhhhheeCCCC
Confidence 36999999976 46778888775543
No 10
>d1xsza2 d.129.9.1 (A:198-354) RalF, C-terminal domain {Legionella pneumophila [TaxId: 446]}
Probab=6.75 E-value=89 Score=25.12 Aligned_cols=16 Identities=31% Similarity=0.648 Sum_probs=13.9
Q ss_pred eeeEEEEEeecccccc
Q 016821 245 YGAKASINVWAPRVVN 260 (382)
Q Consensus 245 yGa~AtInVw~P~V~~ 260 (382)
-|++|+|-||.|.|-.
T Consensus 72 ~~a~a~IQVYkP~ifS 87 (157)
T d1xsza2 72 TSAQATIQVYTPNIFS 87 (157)
T ss_dssp TCCEEEEEEECCCTTT
T ss_pred CCceEEEEEecchHHH
Confidence 5999999999998754
Done!