Query 016822
Match_columns 382
No_of_seqs 142 out of 1509
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 04:22:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016822.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016822hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 7.3E-59 2.5E-63 478.2 16.2 318 36-374 222-565 (566)
2 3q9t_A Choline dehydrogenase a 100.0 6.2E-57 2.1E-61 464.8 18.3 312 36-374 220-572 (577)
3 3qvp_A Glucose oxidase; oxidor 100.0 5.6E-56 1.9E-60 457.6 20.5 309 36-380 241-583 (583)
4 1ju2_A HydroxynitrIle lyase; f 100.0 1E-53 3.5E-58 438.7 20.7 304 36-379 208-521 (536)
5 1gpe_A Protein (glucose oxidas 100.0 5.9E-53 2E-57 437.2 14.7 315 36-375 245-583 (587)
6 3t37_A Probable dehydrogenase; 100.0 3.9E-51 1.3E-55 418.1 20.2 285 36-373 225-522 (526)
7 2jbv_A Choline oxidase; alcoho 100.0 8.8E-52 3E-56 425.2 14.8 291 36-375 223-530 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 1.9E-46 6.6E-51 385.7 13.0 297 36-375 210-543 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 3.5E-43 1.2E-47 358.2 12.3 288 8-376 206-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 4.8E-42 1.6E-46 350.0 11.9 289 7-376 210-506 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 1.6E-39 5.4E-44 338.5 23.0 280 36-377 274-615 (623)
12 4at0_A 3-ketosteroid-delta4-5a 95.6 0.013 4.4E-07 58.9 6.1 56 36-100 216-272 (510)
13 1d4d_A Flavocytochrome C fumar 93.3 0.12 4.2E-06 52.5 6.7 56 36-100 269-325 (572)
14 1qo8_A Flavocytochrome C3 fuma 92.2 0.18 6.2E-06 51.1 6.2 54 36-98 264-318 (566)
15 1y0p_A Fumarate reductase flav 91.4 0.29 9.8E-06 49.6 6.7 55 36-99 269-324 (571)
16 4dgk_A Phytoene dehydrogenase; 90.4 0.23 7.9E-06 49.0 4.8 52 36-101 235-286 (501)
17 2h88_A Succinate dehydrogenase 89.8 0.37 1.3E-05 49.6 5.9 49 36-94 169-218 (621)
18 2bs2_A Quinol-fumarate reducta 89.4 0.48 1.6E-05 49.1 6.4 49 36-94 172-221 (660)
19 2rgh_A Alpha-glycerophosphate 88.9 0.47 1.6E-05 48.2 5.8 56 36-102 202-258 (571)
20 2wdq_A Succinate dehydrogenase 88.7 0.47 1.6E-05 48.4 5.7 50 36-94 157-207 (588)
21 1kf6_A Fumarate reductase flav 87.2 0.71 2.4E-05 47.2 5.9 49 37-95 150-199 (602)
22 3da1_A Glycerol-3-phosphate de 86.4 0.81 2.8E-05 46.3 5.8 56 36-102 184-240 (561)
23 3gyx_A Adenylylsulfate reducta 86.0 0.83 2.9E-05 47.3 5.7 51 36-93 182-233 (662)
24 1jnr_A Adenylylsulfate reducta 85.9 1.1 3.6E-05 46.3 6.4 52 36-94 166-219 (643)
25 1chu_A Protein (L-aspartate ox 84.6 1 3.5E-05 45.3 5.5 51 36-94 153-209 (540)
26 3e1t_A Halogenase; flavoprotei 82.9 1.6 5.5E-05 43.4 6.1 48 36-93 125-172 (512)
27 3ka7_A Oxidoreductase; structu 81.9 0.88 3E-05 43.6 3.6 49 36-99 210-258 (425)
28 3dje_A Fructosyl amine: oxygen 78.6 1.5 5.2E-05 42.2 4.1 48 36-98 175-225 (438)
29 3atr_A Conserved archaeal prot 77.7 2.7 9.4E-05 40.8 5.7 49 36-94 114-163 (453)
30 3dme_A Conserved exported prot 76.5 1.8 6.2E-05 40.1 3.9 53 36-101 164-216 (369)
31 3cgv_A Geranylgeranyl reductas 73.6 5.2 0.00018 37.5 6.3 47 36-93 116-162 (397)
32 2qcu_A Aerobic glycerol-3-phos 71.4 3.8 0.00013 40.5 4.9 52 36-99 163-215 (501)
33 1rp0_A ARA6, thiazole biosynth 69.6 6.4 0.00022 35.6 5.7 47 36-92 134-190 (284)
34 1y56_B Sarcosine oxidase; dehy 68.7 5.4 0.00018 37.3 5.1 51 36-102 163-213 (382)
35 2i0z_A NAD(FAD)-utilizing dehy 68.4 7.8 0.00027 37.5 6.4 47 36-96 148-194 (447)
36 3cty_A Thioredoxin reductase; 66.5 4.5 0.00016 36.8 4.0 57 36-102 204-261 (319)
37 3ab1_A Ferredoxin--NADP reduct 65.7 9.4 0.00032 35.4 6.1 56 37-102 217-272 (360)
38 3r9u_A Thioredoxin reductase; 65.3 5.6 0.00019 35.8 4.4 55 36-100 197-251 (315)
39 1fl2_A Alkyl hydroperoxide red 64.3 6 0.0002 35.7 4.3 53 36-98 194-247 (310)
40 3axb_A Putative oxidoreductase 62.6 6.1 0.00021 38.0 4.3 56 36-102 195-262 (448)
41 3nyc_A D-arginine dehydrogenas 62.3 8 0.00028 35.9 5.0 50 36-102 168-217 (381)
42 3nix_A Flavoprotein/dehydrogen 58.5 11 0.00038 35.7 5.3 46 36-92 120-165 (421)
43 3itj_A Thioredoxin reductase 1 57.7 8.6 0.0003 34.9 4.2 54 36-99 223-277 (338)
44 2gmh_A Electron transfer flavo 57.4 11 0.00038 38.0 5.3 50 36-94 158-218 (584)
45 3f8d_A Thioredoxin reductase ( 57.1 20 0.00067 32.1 6.5 56 36-102 204-260 (323)
46 2gag_B Heterotetrameric sarcos 56.2 10 0.00036 35.5 4.6 51 36-102 188-238 (405)
47 3f8d_A Thioredoxin reductase ( 53.5 16 0.00055 32.7 5.3 53 326-381 269-322 (323)
48 3fg2_P Putative rubredoxin red 52.8 18 0.00061 34.3 5.7 53 36-102 198-250 (404)
49 1trb_A Thioredoxin reductase; 52.7 12 0.0004 33.8 4.2 54 36-99 198-253 (320)
50 3lxd_A FAD-dependent pyridine 51.9 14 0.00048 35.1 4.8 53 36-102 208-260 (415)
51 1mo9_A ORF3; nucleotide bindin 50.6 20 0.0007 35.4 5.9 57 36-102 269-326 (523)
52 4dgk_A Phytoene dehydrogenase; 50.5 7.2 0.00025 38.1 2.5 42 332-377 452-493 (501)
53 2oln_A NIKD protein; flavoprot 50.2 18 0.00062 33.9 5.2 48 36-100 167-214 (397)
54 1hyu_A AHPF, alkyl hydroperoxi 49.5 14 0.00048 36.6 4.5 53 36-98 405-458 (521)
55 3oz2_A Digeranylgeranylglycero 49.4 27 0.00093 32.1 6.3 45 36-91 116-160 (397)
56 3v76_A Flavoprotein; structura 48.4 18 0.00061 34.8 4.9 45 36-96 146-190 (417)
57 1pj5_A N,N-dimethylglycine oxi 48.2 19 0.00064 37.9 5.4 51 36-102 165-215 (830)
58 2q0l_A TRXR, thioredoxin reduc 47.7 19 0.00064 32.3 4.7 56 36-101 193-249 (311)
59 2e5v_A L-aspartate oxidase; ar 47.5 9 0.00031 37.5 2.6 44 36-93 133-176 (472)
60 3i3l_A Alkylhalidase CMLS; fla 46.2 16 0.00055 37.0 4.4 45 36-91 142-186 (591)
61 3p1w_A Rabgdi protein; GDI RAB 45.9 19 0.00066 35.4 4.7 44 36-92 270-313 (475)
62 3nrn_A Uncharacterized protein 45.5 11 0.00038 35.8 2.9 47 36-99 203-249 (421)
63 3nlc_A Uncharacterized protein 44.2 27 0.00091 35.1 5.5 45 36-94 234-278 (549)
64 1d5t_A Guanine nucleotide diss 42.9 28 0.00096 33.4 5.4 42 36-92 248-289 (433)
65 3hyw_A Sulfide-quinone reducta 41.8 34 0.0012 32.7 5.8 53 326-378 275-335 (430)
66 2q7v_A Thioredoxin reductase; 41.4 23 0.00077 32.1 4.2 52 36-98 202-254 (325)
67 1ryi_A Glycine oxidase; flavop 41.4 28 0.00097 32.1 5.0 49 36-101 178-226 (382)
68 1vdc_A NTR, NADPH dependent th 40.9 25 0.00085 31.8 4.4 55 36-98 209-264 (333)
69 3ps9_A TRNA 5-methylaminomethy 40.9 18 0.00062 37.0 3.8 49 36-100 431-479 (676)
70 1y0p_A Fumarate reductase flav 40.4 25 0.00086 35.1 4.7 52 323-374 506-567 (571)
71 4g6h_A Rotenone-insensitive NA 40.2 16 0.00055 36.1 3.2 44 327-373 354-398 (502)
72 3lzw_A Ferredoxin--NADP reduct 37.5 25 0.00085 31.6 3.8 56 36-102 203-259 (332)
73 1vg0_A RAB proteins geranylger 36.2 37 0.0013 34.8 5.1 44 36-91 392-435 (650)
74 1qo8_A Flavocytochrome C3 fuma 35.7 35 0.0012 34.0 4.9 52 323-374 501-562 (566)
75 2gf3_A MSOX, monomeric sarcosi 35.3 26 0.00089 32.5 3.7 47 36-99 164-210 (389)
76 3pvc_A TRNA 5-methylaminomethy 35.0 21 0.0007 36.8 3.1 50 36-100 426-475 (689)
77 2bcg_G Secretory pathway GDP d 34.5 45 0.0015 32.1 5.4 44 36-92 256-299 (453)
78 2h88_A Succinate dehydrogenase 33.5 46 0.0016 33.8 5.4 52 323-374 366-431 (621)
79 1d4d_A Flavocytochrome C fumar 33.3 35 0.0012 34.1 4.5 52 323-374 506-568 (572)
80 3jsk_A Cypbp37 protein; octame 33.1 47 0.0016 31.1 5.0 54 36-94 175-252 (344)
81 2cul_A Glucose-inhibited divis 30.3 60 0.0021 27.8 5.0 44 37-95 84-127 (232)
82 2r0c_A REBC; flavin adenine di 29.2 63 0.0021 32.0 5.5 50 39-99 152-202 (549)
83 2gjc_A Thiazole biosynthetic e 29.0 53 0.0018 30.5 4.5 30 36-66 161-192 (326)
84 2uzz_A N-methyl-L-tryptophan o 28.8 43 0.0015 30.7 3.9 41 36-92 163-203 (372)
85 2qa2_A CABE, polyketide oxygen 28.8 60 0.0021 31.7 5.2 49 36-96 121-169 (499)
86 2zxi_A TRNA uridine 5-carboxym 28.0 43 0.0015 34.2 4.0 44 37-95 139-182 (637)
87 2zbw_A Thioredoxin reductase; 26.2 58 0.002 29.3 4.3 56 36-102 205-261 (335)
88 2gqf_A Hypothetical protein HI 26.0 39 0.0013 32.1 3.2 46 326-371 351-398 (401)
89 2kgy_A RV0603 protein, possibl 25.8 44 0.0015 25.3 2.6 35 41-77 51-85 (102)
90 3s5w_A L-ornithine 5-monooxyge 25.5 68 0.0023 30.6 4.8 48 36-94 330-378 (463)
91 2qa1_A PGAE, polyketide oxygen 25.4 88 0.003 30.6 5.7 50 36-97 120-169 (500)
92 1yvv_A Amine oxidase, flavin-c 25.0 38 0.0013 30.6 2.7 49 36-98 119-167 (336)
93 3ihg_A RDME; flavoenzyme, anth 24.9 81 0.0028 30.9 5.4 48 36-93 134-183 (535)
94 2jae_A L-amino acid oxidase; o 24.7 99 0.0034 29.6 5.9 42 37-90 252-293 (489)
95 1q1r_A Putidaredoxin reductase 24.0 80 0.0028 30.0 5.0 55 36-102 205-259 (431)
96 2ywl_A Thioredoxin reductase r 23.3 1.3E+02 0.0044 24.2 5.6 48 36-102 70-117 (180)
97 1sez_A Protoporphyrinogen oxid 23.1 17 0.00058 35.4 -0.1 52 37-93 256-308 (504)
98 2bry_A NEDD9 interacting prote 23.0 19 0.00064 35.5 0.2 53 36-96 180-233 (497)
99 3iwa_A FAD-dependent pyridine 22.9 89 0.003 30.0 5.1 52 36-102 216-267 (472)
100 3s5w_A L-ornithine 5-monooxyge 22.8 1.1E+02 0.0039 28.9 5.9 47 37-91 142-190 (463)
101 3lov_A Protoporphyrinogen oxid 22.6 53 0.0018 31.5 3.4 45 37-97 249-293 (475)
102 3ic9_A Dihydrolipoamide dehydr 22.3 72 0.0025 31.0 4.4 50 37-97 229-278 (492)
103 3sqn_A Conserved domain protei 22.2 24 0.00082 34.8 0.8 19 82-100 399-417 (485)
104 2vvm_A Monoamine oxidase N; FA 22.1 83 0.0028 30.3 4.8 40 37-91 271-310 (495)
105 1k0i_A P-hydroxybenzoate hydro 21.4 80 0.0028 29.2 4.4 49 36-95 117-165 (394)
106 3ces_A MNMG, tRNA uridine 5-ca 21.3 68 0.0023 32.8 4.0 43 37-94 140-182 (651)
107 3sx6_A Sulfide-quinone reducta 20.8 1.4E+02 0.0049 28.2 6.1 53 326-378 286-346 (437)
108 2xve_A Flavin-containing monoo 20.8 71 0.0024 30.8 3.9 52 39-99 120-172 (464)
109 2wdq_A Succinate dehydrogenase 20.4 81 0.0028 31.6 4.3 52 323-374 356-422 (588)
110 3h28_A Sulfide-quinone reducta 20.3 1.2E+02 0.0043 28.5 5.5 52 327-378 276-335 (430)
111 2gv8_A Monooxygenase; FMO, FAD 20.3 1.1E+02 0.0037 29.1 5.1 49 39-98 132-182 (447)
112 4a9w_A Monooxygenase; baeyer-v 20.1 54 0.0018 29.5 2.7 49 326-377 302-353 (357)
113 3i6d_A Protoporphyrinogen oxid 20.1 69 0.0024 30.3 3.6 46 37-97 248-293 (470)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=7.3e-59 Score=478.17 Aligned_cols=318 Identities=20% Similarity=0.327 Sum_probs=232.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCC-ceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATG-AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNI 106 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G-~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi 106 (382)
+++|+++++|+||+|++..++.+||+||+|.+.+| +.++++ |+||||||||+|+||||||+|| ++||
T Consensus 222 NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI 297 (566)
T 3fim_B 222 NLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGI 297 (566)
T ss_dssp TEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTC
T ss_pred CeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCC
Confidence 57899999999999972101127999999987556 777887 4699999999999999999999 8999
Q ss_pred ceeecCCCCCCCCCCCCCCeeEeecCCCccch-h-hhh-hcccchhhHHHhccCcccccCCCCCCccccccccc--cccc
Q 016822 107 TVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVS-L-IQV-VGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI--GQLS 181 (382)
Q Consensus 107 ~~~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~~~~ 181 (382)
+++.|+|+||+|||||+.+.+.+....+.... . ... .......+|...++|+ +.... ....+++.... ..+.
T Consensus 298 ~vv~dlPgVG~NLqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-l~~~~--~~~~~f~~~~~~~~~~~ 374 (566)
T 3fim_B 298 DTIVNNPSVGRNLSDHLLLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGP-LTALI--ANHLAWLRLPSNSSIFQ 374 (566)
T ss_dssp CCSEECTTTTCSBBCCEEECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSG-GGCCS--CSEEEEECCCTTCGGGG
T ss_pred CceecCcchhhhhhcCccceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCC-cccCh--hhheeeeccccchhhhh
Confidence 99999999999999999888777765443211 0 000 0112234677777786 54321 01112221100 0000
Q ss_pred cC---CCCCCCHHHHHHHHHhhc--cCCC-CCCcceeEEEeecccccccEEEecCCCCCCCCeeeeCCCCChhhHHHHHH
Q 016822 182 KV---PPKQRTPEAIAEAIENMK--ALDD-PAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQ 255 (382)
Q Consensus 182 ~~---~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~P~s~G~V~L~~~d~~~~P~i~~~y~~~~~D~~~~~~ 255 (382)
.. ......|+++..+..... .... .....+.+...+++|.|||+|+|+++||++.|.|+++|+.+|.|++.+++
T Consensus 375 ~~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~ 454 (566)
T 3fim_B 375 TFPDPAAGPNSAHWETIFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQ 454 (566)
T ss_dssp TSCCCSSSTTSCSEEEEEESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHH
T ss_pred hhccccccCCCCCEEEEecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHH
Confidence 00 001112222100000000 0000 01123456677899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCcccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCcccccCC------cccC
Q 016822 256 GISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVD 329 (382)
Q Consensus 256 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~GTcrMG------sVVD 329 (382)
+++.+++|+++++++.+...+. .|+. ....+|++|++|+|+...+.+|++|||||| +|||
T Consensus 455 ~~~~~~~i~~~~~~~~~~~~~~-----------~P~~---~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD 520 (566)
T 3fim_B 455 AVKSNLRFLSGQAWADFVIRPF-----------DPRL---RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVD 520 (566)
T ss_dssp HHHHHHHHHTSGGGTTTEEEES-----------SGGG---SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBC
T ss_pred HHHHHHHHHhCcccCCcccccc-----------CCCc---ccccchHHHHHHHhhcccccccccCccccCCcccCCccCC
Confidence 9999999999988887754331 1210 245689999999999999999999999999 7999
Q ss_pred CCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHh
Q 016822 330 HDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 374 (382)
Q Consensus 330 ~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~ 374 (382)
++||||||+||||+|+||||+.+++||++|+||||||+||.|+++
T Consensus 521 ~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 521 PDLKVKGVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp TTCBBTTCBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEccCCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999977653
No 2
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=6.2e-57 Score=464.82 Aligned_cols=312 Identities=20% Similarity=0.296 Sum_probs=231.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCcc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNIT 107 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi~ 107 (382)
+++|+++++|+||++++. +++|+||+|.+.+|+.++++ |+||||||||+|+||||||+|| ++|||
T Consensus 220 Nl~v~~~a~v~ri~~~~~---~~~a~GV~~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~ 292 (577)
T 3q9t_A 220 NITIVPEVHSKRLIINEA---DRTCKGVTVVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGIN 292 (577)
T ss_dssp TEEEECSEEEEEEEEETT---TTEEEEEEEEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCC
T ss_pred CeEEEcCcEEEEEEEeCC---CCEEEEEEEEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCC
Confidence 588999999999999842 68999999987668888887 4699999999999999999999 89999
Q ss_pred eeecCCCCCCCCCCCCCCeeEeecCCCccch-h-h-h-hhcccchhhHHHhccCcccccCCCCCCccccccccc--c---
Q 016822 108 VVLDQPLVGQGMSDNPMNAIFVPSPVPVEVS-L-I-Q-VVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI--G--- 178 (382)
Q Consensus 108 ~~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~-~-~-~-~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~--- 178 (382)
+++|+|+||+|||||+.+.+.+..+.+.... . . . ........+|...++|+ +.... ....++..... .
T Consensus 293 vv~dlP~VG~nl~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gp-l~~~~--~~~~~~~~~~~~~~~~~ 369 (577)
T 3q9t_A 293 TIVDSRHVGQNLMDHPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGP-VGSGL--LELVGFPRIDKYLEKDA 369 (577)
T ss_dssp CSEECTTTTEEEBCCEEEEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSG-GGCCS--EEEEEECCCHHHHTTCH
T ss_pred eeccCchhhhhhhcCcceeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCC-cccch--hheeEEeecChhhhcch
Confidence 9999999999999999988888876543211 0 0 0 01112334676667776 54221 00111111000 0
Q ss_pred cc----------cc-CCCCCCCHHHHHHHH----Hhhc-cCCC-CCCcceeEEEeeccccccc-EEEecCCCCCCCCeee
Q 016822 179 QL----------SK-VPPKQRTPEAIAEAI----ENMK-ALDD-PAFRGGFILEKVMGPVSTG-HLELRTRNPNDNPSVT 240 (382)
Q Consensus 179 ~~----------~~-~~~~~~~~~~~~~~~----~~~~-~~~~-~~~~~~~~~~~~~~P~s~G-~V~L~~~d~~~~P~i~ 240 (382)
.+ .. .+. ..|+++..+. ..+. .... .....+.+...+++|.||| +|+|+|+||++.|.|+
T Consensus 370 ~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~ 447 (577)
T 3q9t_A 370 EYRKAKAANGGKDPFSPL--GQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNIN 447 (577)
T ss_dssp HHHHHHHHTTTSCSSCTT--SCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEE
T ss_pred hhhhhhhccccccccCCC--CCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEe
Confidence 00 00 000 0111100000 0000 0000 0112344667789999999 9999999999999999
Q ss_pred eCCCCChhhHHHHHHHHHHHHHHH-cCcccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCc
Q 016822 241 FNYFKEPEDLQRCVQGISTIEKII-ESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYH 319 (382)
Q Consensus 241 ~~y~~~~~D~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~ 319 (382)
+||+.+|.|++.++++++.+++|+ +++++..+...+. .|+ ....+|++|++|+|+...+.+|++
T Consensus 448 p~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~e~-----------~p~----~~~~sd~~~~~~ir~~~~t~~H~~ 512 (577)
T 3q9t_A 448 LNFFANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEY-----------PWE----MPLDSDKEMHRAVLDRCQTAFHPT 512 (577)
T ss_dssp CCTTCSHHHHHHHHHHHHHHHHHHHHSTTGGGTEEEEE-----------SSC----CCTTCHHHHHHHHHHHCEECSCCB
T ss_pred cCcCCCccHHHHHHHHHHHHHHHHHhChhhhhcccccc-----------CCC----CCcCCHHHHHHHHHhccccccccc
Confidence 999999999999999999999999 8888887764331 122 246789999999999999999999
Q ss_pred ccccCC-----cccCCCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHh
Q 016822 320 GGCQVG-----KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 374 (382)
Q Consensus 320 GTcrMG-----sVVD~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~ 374 (382)
|||||| +|||++||||||+||||+|+||||+.+++||++|+||||||+||.|+++
T Consensus 513 GTc~Mg~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 513 GTARLSKNIDQGVVDPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp CTTCBCSSTTTCSBCTTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred cceecCCCCCCceECCCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 999999 7999999999999999999999999999999999999999999866654
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=5.6e-56 Score=457.61 Aligned_cols=309 Identities=20% Similarity=0.233 Sum_probs=221.0
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCcc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNIT 107 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi~ 107 (382)
++.|+++++|+||+|++. ++++||+||+|.+.+|+.++++ |+||||||||+|+||||||+|| ++|||
T Consensus 241 NL~V~t~a~V~rIl~d~~-~~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~ 315 (583)
T 3qvp_A 241 NLQVLTGQYVGKVLLSQN-GTTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGID 315 (583)
T ss_dssp TEEEECSCEEEEEEEECS-SSSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCC
T ss_pred CcEEEcCCEEEEEEeccC-CCCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCC
Confidence 478999999999999842 1267999999986678888888 4689999999999999999999 89999
Q ss_pred eeecCCCCCCCCCCCCCCeeEeecCCCcc--------chhhhhhcc--cchhhHHHhccCcccccCCCCCCccccccccc
Q 016822 108 VVLDQPLVGQGMSDNPMNAIFVPSPVPVE--------VSLIQVVGI--TQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 177 (382)
Q Consensus 108 ~~~~~p~VG~nL~DH~~~~v~~~~~~~~~--------~~~~~~~~~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 177 (382)
++.|+| ||+|||||+.+.+.+....... .++....+. .....|.....+. |... . .+.
T Consensus 316 vv~dLP-VG~NLqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~--~~~ 383 (583)
T 3qvp_A 316 TVVDLP-VGLNLQDQTTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQ-WAEE--------A--VAR 383 (583)
T ss_dssp CSBCCC-TTCCBBCCEEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHH-HHHH--------H--HHT
T ss_pred ceeeCc-cccchhhCccceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcch-hhcc--------c--ccc
Confidence 999999 9999999999888887653211 001010110 0001111111110 1000 0 000
Q ss_pred cccccCCCCCCCHHHHHHHHH---h-hc-cCCC--C---CCcceeEEEeecccccccEEEecCCCCCCCCee-eeCCCCC
Q 016822 178 GQLSKVPPKQRTPEAIAEAIE---N-MK-ALDD--P---AFRGGFILEKVMGPVSTGHLELRTRNPNDNPSV-TFNYFKE 246 (382)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~---~-~~-~~~~--~---~~~~~~~~~~~~~P~s~G~V~L~~~d~~~~P~i-~~~y~~~ 246 (382)
+.|. ..++++..+.. . +. ..+. . ......+....++|.|||+|+|+++||++.|.| ++||+.+
T Consensus 384 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~ 457 (583)
T 3qvp_A 384 GGFH------NTTALLIQYENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLN 457 (583)
T ss_dssp TSCS------CHHHHHHHHHHHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCS
T ss_pred cCcc------ccHHHHhhhccchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCC
Confidence 0110 01121111110 0 00 0000 0 001122344558999999999999999999999 9999999
Q ss_pred hhhHHHHHHHHHHHHHHHcCcccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCcccccCC-
Q 016822 247 PEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG- 325 (382)
Q Consensus 247 ~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~GTcrMG- 325 (382)
|.|++.++++++.+++|+++++++.+...+. .|+.-. ....+|++|++|+|+...+.+|++||||||
T Consensus 458 ~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~pg~~~-~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~ 525 (583)
T 3qvp_A 458 ELDLLGQAAATQLARNISNSGAMQTYFAGET-----------IPGDNL-AYDADLSAWTEYIPYHFRPNYHGVGTCSMMP 525 (583)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTHHHHEEEEE-----------ESGGGS-CTTCCHHHHHHHGGGSCEECSCCBCTTCBSC
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhcccccc-----------CCCccc-ccCCCHHHHHHHHHhccCCCcCCCCceeCCC
Confidence 9999999999999999999888877653321 121000 123689999999999999999999999999
Q ss_pred ----cccCCCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHhhhhccC
Q 016822 326 ----KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASND 380 (382)
Q Consensus 326 ----sVVD~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~~~~~~ 380 (382)
+|||++||||||+||||+|+||||+.+++||++|+||||||+||.|+ +.+.++|
T Consensus 526 ~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~-~~~~~~~ 583 (583)
T 3qvp_A 526 KEMGGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAIL-EDYASMQ 583 (583)
T ss_dssp GGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHH-HHHHHCC
T ss_pred CCCCceECCCCeEecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHH-HhhhhcC
Confidence 89999999999999999999999999999999999999999998655 4555543
No 4
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1e-53 Score=438.68 Aligned_cols=304 Identities=38% Similarity=0.709 Sum_probs=225.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCcc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNIT 107 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi~ 107 (382)
+++|+++++|+||++++. ++++|+||++.+.+|+.+++++ +++|+||||||+|+||+||++|| ++||+
T Consensus 208 ~~~v~~~~~v~~i~~~~~--~~~~~~GV~~~~~~g~~~~~~v--~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~ 283 (536)
T 1ju2_A 208 NLRVGVHASVEKIIFSNA--PGLTATGVIYRDSNGTPHQAFV--RSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIP 283 (536)
T ss_dssp TEEEEESCEEEEEEECCS--SSCBEEEEEEECTTSCEEEEEE--EEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCC
T ss_pred CcEEEeCCEEEEEEECCC--CCCEEEEEEEEeCCCceEEEEe--ccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCc
Confidence 478999999999999731 1359999999876677666531 13699999999999999999999 78999
Q ss_pred eeecCCCCCCCCCCCCCCeeEeecCCCccchhhhhhcccchhhHHHhccCcccccCCCCCCccccccccccccccCCCCC
Q 016822 108 VVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQ 187 (382)
Q Consensus 108 ~~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (382)
++.++|+||+|||||+...+.+..+.+....+....+.. ..|.....|+ +.... ..+..++...
T Consensus 284 ~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~-~~~~~-------------~~~~~~~~~~ 347 (536)
T 1ju2_A 284 VVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGIS--NDFYQCSFSS-LPFTT-------------PPFGFFPSSS 347 (536)
T ss_dssp CSEECTTTTEEEECCEEEEEEECCSSCCCCCCCCEEEEC--SSEEEEEEEE-CCCSS-------------CCBTTBSSSC
T ss_pred eEecCcccccchhcCcceeEEEEeCCCcccccchhhhHH--HHHHHcCCCC-CCCCh-------------hhheeecCcc
Confidence 999999999999999988777776644321111101100 0122222232 11100 0000011000
Q ss_pred CCHHHHHHHHHhhccCCCCCCcceeEEEeecccccccEEEe-cCCCCCCCCeeeeCCCCChhhHHHHHHHHHHHHHHHcC
Q 016822 188 RTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL-RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIES 266 (382)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~s~G~V~L-~~~d~~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~ 266 (382)
...+. ....++...+++|.|||+|+| +++||++.|.|+++|+.++.|++.++++++.+++++++
T Consensus 348 -------------~~~~~--~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~ 412 (536)
T 1ju2_A 348 -------------YPLPN--STFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLST 412 (536)
T ss_dssp -------------CCCCS--SCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTS
T ss_pred -------------cCCCC--cceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcC
Confidence 00011 112345667889999999999 88999999999999999999999999999999999999
Q ss_pred ccccccccccc-chhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCcccccCCcccCCCCeEeeeCCeEEeec
Q 016822 267 KSFSKFKYESM-SVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDG 345 (382)
Q Consensus 267 ~~~~~~~~~~~-~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~GTcrMGsVVD~~~rV~gv~NL~VvDa 345 (382)
+++..+...+. +.+.+..... -.|....+|+++++|+++...+.+|++||||||+|||++|||||++||||+|+
T Consensus 413 ~~~~~~~~~~~~~~p~~~~~~~-----~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDa 487 (536)
T 1ju2_A 413 DALKPYKVEDLPGVEGFNILGI-----PLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDG 487 (536)
T ss_dssp GGGGGGCSSCCSTTCSCCBSSS-----CCCSCTTCHHHHHHHHHHHCEECSCCEESSCBTTTBCTTSBBTTCBTEEECSG
T ss_pred ccchhhhccccccCCCcccccc-----CCCcccCCHHHHHHHHHhccCccccCcCccCCccEECCCCeEcCCCCeEEeec
Confidence 88887654321 1111110000 01233458999999999998999999999999999999999999999999999
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHHHHHHhhhhcc
Q 016822 346 STFYYSPGTNPQATVMMLGRYMGVRILSERLASN 379 (382)
Q Consensus 346 SvfP~~~~~Np~~Ti~alA~r~A~~i~~~~~~~~ 379 (382)
||||+++++||++|+||||||+|++|+++.|.++
T Consensus 488 Sv~P~~~~~np~~t~~aiAer~A~~ii~~~~~~~ 521 (536)
T 1ju2_A 488 STFPYTPASHPQGFYLMLGRYVGIKILQERSASD 521 (536)
T ss_dssp GGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999988765
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=5.9e-53 Score=437.19 Aligned_cols=315 Identities=17% Similarity=0.145 Sum_probs=222.8
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCcc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNIT 107 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi~ 107 (382)
+++|++++.|+||++++. +++++|+||++.+.+|+.++++ |+|+||||||+|+||+|||+|| ++||+
T Consensus 245 nl~i~~~~~v~~l~~~~~-~~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~ 319 (587)
T 1gpe_A 245 NLEILTGQMVGKVLFKQT-ASGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVT 319 (587)
T ss_dssp TEEEEESCEEEEEEEEEE-TTEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCC
T ss_pred CcEEEcCCEEEEEEECCC-CCCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCC
Confidence 478999999999999842 1126999999986578877887 3599999999999999999999 79999
Q ss_pred eeecCCCCCCCCCCCCCCeeEeecCCCccchhhhhhc-ccchhhHHHhccCcccccCCCCCCccccccccccccccCCCC
Q 016822 108 VVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVG-ITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPK 186 (382)
Q Consensus 108 ~~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (382)
++.|+| ||+||+||+...+.+.++.+... ...... ......|.....|+ +.... .. ..++..... ...-...
T Consensus 320 vv~dlP-VG~nL~DH~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~-~~~~~~~~~--~~~~~~~ 392 (587)
T 1gpe_A 320 QLLDLP-VGINMQDQTTTTVSSRASSAGAG-QGQAVFFANFTETFGDYAPQA-RDLLN-TK-LDQWAEETV--ARGGFHN 392 (587)
T ss_dssp CSEECC-TTCSBBCCEEEEEEEEECGGGCS-BCEEEEEEEHHHHHGGGHHHH-HHHHH-HS-HHHHHHHHH--HTTSCSC
T ss_pred eEEeCC-CCcchhcCcccceEEEeCCCccc-ccchHHHHHHHHHHHhCCCCC-ccccc-cc-eeeEeeccc--ccccccc
Confidence 999999 99999999998888776643211 100000 00112232222232 11000 00 000100000 0000000
Q ss_pred CC--CHHHHHHHHHhh-c-cCCCC-----CCcceeEEEeecccccccEEEecCCCCCCCC-eeeeCCCCChhhHHHHHHH
Q 016822 187 QR--TPEAIAEAIENM-K-ALDDP-----AFRGGFILEKVMGPVSTGHLELRTRNPNDNP-SVTFNYFKEPEDLQRCVQG 256 (382)
Q Consensus 187 ~~--~~~~~~~~~~~~-~-~~~~~-----~~~~~~~~~~~~~P~s~G~V~L~~~d~~~~P-~i~~~y~~~~~D~~~~~~~ 256 (382)
.. .++++..+ ..+ . ..+.. ......+...+++|.|||+|+|+++||++.| .|+++|+.++.|++.++++
T Consensus 393 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~ 471 (587)
T 1gpe_A 393 VTALKVQYENYR-NWLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAA 471 (587)
T ss_dssp HHHHHHHHHHHH-HHHHHSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHH
T ss_pred cccccccHHHHh-hhccCCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHH
Confidence 00 13332211 111 0 00000 0112345567889999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCcccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCcccccCC-----cccCCC
Q 016822 257 ISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHD 331 (382)
Q Consensus 257 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~GTcrMG-----sVVD~~ 331 (382)
++.+++|++++++..+...+. .|+.-. ....+|+++++|+++...+.+|++|||||| +|||++
T Consensus 472 ~~~~~~i~~~~~~~~~~~~~~-----------~pg~~~-~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~ 539 (587)
T 1gpe_A 472 SKLARDLTSQGAMKEYFAGET-----------LPGYNL-VQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDAT 539 (587)
T ss_dssp HHHHHHHHTSTTHHHHEEEEE-----------ESGGGS-CTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTT
T ss_pred HHHHHHHHcCcchhhhccccc-----------CCCccc-cCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCC
Confidence 999999999988877653221 122100 112689999999999888999999999999 699999
Q ss_pred CeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHhh
Q 016822 332 YKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSER 375 (382)
Q Consensus 332 ~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~ 375 (382)
|||||++||||+|+||||+++++||++|+||||||+||.|+++.
T Consensus 540 lrV~Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~ 583 (587)
T 1gpe_A 540 AKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDY 583 (587)
T ss_dssp CBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHH
T ss_pred CEEECCCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999887654
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=3.9e-51 Score=418.14 Aligned_cols=285 Identities=21% Similarity=0.308 Sum_probs=210.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCcc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNIT 107 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi~ 107 (382)
++.|+++++|+||+++ +++|+||+|.+. +..+++. +||||||||+|+||||||+|| ++||+
T Consensus 225 nl~v~~~~~v~~i~~~-----~~~a~gv~~~~~-~~~~~~~-----a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~ 293 (526)
T 3t37_A 225 NLTILTGSRVRRLKLE-----GNQVRSLEVVGR-QGSAEVF-----ADQIVLCAGALESPALLMRSGIGPHDVLDAAGVG 293 (526)
T ss_dssp TEEEECSCEEEEEEEE-----TTEEEEEEEEET-TEEEEEE-----EEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCC
T ss_pred CeEEEeCCEEEEEEec-----CCeEEEEEEEec-CceEEEe-----ecceEEcccccCCcchhhhccCCchhhhhccCCC
Confidence 4779999999999998 689999999874 4556665 499999999999999999999 78999
Q ss_pred eeecCCCCCCCCCCCCCCeeE-eecCCCccchhhhhhcccchhhHHHhccCcccccCCCCCCccccccccccccccCCCC
Q 016822 108 VVLDQPLVGQGMSDNPMNAIF-VPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPK 186 (382)
Q Consensus 108 ~~~~~p~VG~nL~DH~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (382)
++.++|+||+||+||+..... +....+....... .... ..+. ..+. +......+..++.. ..+..
T Consensus 294 vv~dlp~VG~nl~DH~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~--~~~~-~~~~~~~~~~~~~~--------~~~~~ 359 (526)
T 3t37_A 294 CLIDMPDIGRNLQDHLLGAGNLYAARKPVPPSRLQ--HSES-MAYM--RADS-FTAAGQPEIVVGCG--------VAPIV 359 (526)
T ss_dssp CSEECTTTTCSBBCCEEEEEEEEEESSCCCCCSSC--SEEE-EEEE--CSSC-SSCCSSCCEEEEEE--------SSCCC
T ss_pred eEecCCccccccccccccceeEEeccCCcchHhhc--chhh-hhhh--hccc-ccccCCcceeeecc--------ccccc
Confidence 999999999999999865433 2222221110000 0000 0000 0000 10000000000000 00000
Q ss_pred CCCHHHHHHHHHhhccCCCCCCcceeEEEeecccccccEEEecCCCCCCCCeeeeCCCCChhhHHHHHHHHHHHHHHHcC
Q 016822 187 QRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIES 266 (382)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~s~G~V~L~~~d~~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~ 266 (382)
. + .+.. + .....+.+...+++|.|||+|++++.|+.+.|.|+++|+.++.|++.++++++.+++|+++
T Consensus 360 ~---~-------~~~~-~-~~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~ 427 (526)
T 3t37_A 360 S---E-------SFPA-P-AAGSAYSLLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHR 427 (526)
T ss_dssp C---T-------TSCC-C-CTTSEEEEEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTC
T ss_pred c---c-------cccc-c-cCCcceeeeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcC
Confidence 0 0 0000 0 0112334566788999999999999999999999999999999999999999999999998
Q ss_pred cccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCcccccCC----cccCCCCeEeeeCCeEE
Q 016822 267 KSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRV 342 (382)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~GTcrMG----sVVD~~~rV~gv~NL~V 342 (382)
..+..+...+ +.|....+++++++|+++...+.+|++|||||| +|||++|||||++||||
T Consensus 428 ~~~~~~~~~~----------------~~pg~~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~~sVVD~~~rV~Gv~nL~V 491 (526)
T 3t37_A 428 DELAGWRERE----------------LLPGTPNSAAEMDDFIARSVITHHHPCGTCRMGKDPDAVVDANLRLKALDNLFV 491 (526)
T ss_dssp GGGTTTEEEE----------------CSSCCCCSHHHHHHHHHHHEEECSCCBCTTCBCSSTTCSBCTTCBBTTCSSEEE
T ss_pred hhhhhccccc----------------cCCCCCCCHHHHHHHHHhcCccCcccCccccCCCCCCccCCCCCEEcCCCCeEE
Confidence 8777765432 234445688999999999999999999999999 79999999999999999
Q ss_pred eecccCCCCCCCChHHHHHHHHHHHHHHHHH
Q 016822 343 IDGSTFYYSPGTNPQATVMMLGRYMGVRILS 373 (382)
Q Consensus 343 vDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~ 373 (382)
+||||||+++++||++|+||||||+||+...
T Consensus 492 vDaSv~P~~~~~np~~ti~aiAEkaAd~~~~ 522 (526)
T 3t37_A 492 VDASIMPNLTAGPIHAAVLAIAETFARQYHH 522 (526)
T ss_dssp CSGGGCSSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEcCcccCCcChHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999998763
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=8.8e-52 Score=425.24 Aligned_cols=291 Identities=28% Similarity=0.421 Sum_probs=214.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCC-CceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNI 106 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~-G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi 106 (382)
.++|++++.|++|+++. +++|+||++.+.. |+.+++++ +|+||||||+|+||+||++|| ++||
T Consensus 223 ~~~i~~~~~V~~i~~~~----~~~~~GV~~~~~~~g~~~~i~A----~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi 294 (546)
T 2jbv_A 223 NFTLLTGLRARQLVFDA----DRRCTGVDIVDSAFGHTHRLTA----RNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGI 294 (546)
T ss_dssp TEEEECSCEEEEEEECT----TSBEEEEEEESSTTSCEEEEEE----EEEEEECSHHHHHHHHHHHTTEECHHHHHHTTC
T ss_pred CcEEEeCCEEEEEEECC----CCeEEEEEEEECCCCcEEEEEe----CccEEEecCccCCchhhhhcCCCchHHHHhcCC
Confidence 47899999999999972 3799999998632 77777873 469999999999999999999 7899
Q ss_pred ceeecCCCCCCCCCCCCCCeeEeecCCCccchhhhhhcccchhhHHHhccCcccccCCCCCCccccccccccccccCCCC
Q 016822 107 TVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPK 186 (382)
Q Consensus 107 ~~~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (382)
+++.++|+||+||+||+...+.+.++.+... .. .+......|.....+. ..+ .+.+. + .+..
T Consensus 295 ~~~~dlP~VG~nL~dH~~~~~~~~~~~~~~~-~~--~~~~~~~~f~~~~~~~------~~p-~~~~~------~--~~~~ 356 (546)
T 2jbv_A 295 EVLVDSPGVGEHLQDHPEGVVQFEAKQPMVA-ES--TQWWEIGIFTPTEDGL------DRP-DLMMH------Y--GSVP 356 (546)
T ss_dssp CCSEECTTTTCSBBCCEECCEEEEESSCCCS-CC--SSSCCEEEEECSSTTC------SSC-SEEEE------E--ESSC
T ss_pred ceEeeCcchhhhhhhCccceEEEEecCCCcc-cc--cchhheEEEEecCCCC------CCC-ceEEE------e--cccc
Confidence 9999999999999999998887776543211 00 0000000010000000 000 00000 0 0000
Q ss_pred CCCHHHHHHHHHhhccCCCCCCcceeEEEeecccccccEEEecCCCCCCCCeeeeCCCCChh--hHHHHHHHHHHHHHHH
Q 016822 187 QRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPE--DLQRCVQGISTIEKII 264 (382)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~s~G~V~L~~~d~~~~P~i~~~y~~~~~--D~~~~~~~~~~~~~i~ 264 (382)
. ... +. ... .. .....+.+...+++|.|||+|+|+++||++.|.|+++|+.++. |++.++++++.+++|+
T Consensus 357 ~-~~~----~~-~~g-~~-~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~ 428 (546)
T 2jbv_A 357 F-DMN----TL-RHG-YP-TTENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIA 428 (546)
T ss_dssp C-CTT----TG-GGT-CC-CCSSEEEEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHH
T ss_pred c-ccc----cc-ccC-cc-CCCCeEEEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHH
Confidence 0 000 00 000 00 0112334556789999999999999999999999999999999 9999999999999999
Q ss_pred cCcccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCcccccCC------cccCCCCeEeeeC
Q 016822 265 ESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVD 338 (382)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~GTcrMG------sVVD~~~rV~gv~ 338 (382)
+++++..+...+. .|+ ....+|+++++|+++...+.+|++|||||| +|||++|||||++
T Consensus 429 ~~~~~~~~~~~~~-----------~p~----~~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 493 (546)
T 2jbv_A 429 AQPAMAEWTGREL-----------SPG----VEAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVT 493 (546)
T ss_dssp TSGGGTTTEEEEE-----------ESC----TTCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSB
T ss_pred cCcchhhcccccc-----------cCC----CCCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCC
Confidence 9988877653221 122 245689999999999888999999999999 7999999999999
Q ss_pred CeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHhh
Q 016822 339 ALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSER 375 (382)
Q Consensus 339 NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~ 375 (382)
||||+|+||||+++++||++|+||||||+||.|+++.
T Consensus 494 nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~ 530 (546)
T 2jbv_A 494 GLRVADASVMPEHVTVNPNITVMMIGERCADLIRSAR 530 (546)
T ss_dssp SEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC----
T ss_pred CeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999887654
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1.9e-46 Score=385.70 Aligned_cols=297 Identities=22% Similarity=0.271 Sum_probs=205.5
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCce--EEEEeecCCCceEEEeCCCcCChHHHHhhc--------CC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAK--HRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AH 104 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~--~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~ 104 (382)
.+++++++.|++|+++ +++|+||++.+. +|+. .+++ ++|+||||||+++||+||++|| ++
T Consensus 210 ~~~i~~~~~V~~i~~~-----~~~~~gV~~~~~~~g~~~~~~v~----~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~ 280 (546)
T 1kdg_A 210 NFTFKTNVMVSNVVRN-----GSQILGVQTNDPTLGPNGFIPVT----PKGRVILSAGAFGTSRILFQSGIGPTDMIQTV 280 (546)
T ss_dssp TEEEECSCCEEEEEEE-----TTEEEEEEESCTTSSGGGEEEEE----EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHH
T ss_pred CcEEEeCCEEEEEEEe-----CCEEEEEEEEecCCCceeEEEEE----eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHh
Confidence 4789999999999997 579999999763 4653 2344 3699999999999999999999 22
Q ss_pred ------Cccee-----ecCCCCCCCCCCCCCCeeEeecCCC-ccchhhhhh-c--ccchhhHHHhccCcccccCCCCCCc
Q 016822 105 ------NITVV-----LDQPLVGQGMSDNPMNAIFVPSPVP-VEVSLIQVV-G--ITQFGSYIEAASGENFAGGSPSPRD 169 (382)
Q Consensus 105 ------gi~~~-----~~~p~VG~nL~DH~~~~v~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~G~~~~~~~~~~~~ 169 (382)
||+++ .|+| ||+|||||+.+.+.+..+.. ....+...+ . ......|...+.|+ +.... . .
T Consensus 281 gn~s~~GI~v~~~~~~~dlp-VG~nL~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~--~-~ 355 (546)
T 1kdg_A 281 QSNPTAAAALPPQNQWINLP-VGMNAQDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGV-FAGAS--P-K 355 (546)
T ss_dssp HTSHHHHHHSCCGGGCBCCC-TTTTBBCCCCEEEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSG-GGSCS--C-C
T ss_pred hccccCCcccccccccccCC-cccCcccCcceeEEEecCCcccccchhhhhcchhHHHHHHHHHcCCcc-cccCC--c-c
Confidence 68874 7999 99999999998887763321 101111100 0 11223455555665 33211 0 0
Q ss_pred cccccccccccccCCCCCCCHHHHHHHHHh----hcc-CCCCCCcceeEEEeeccc-ccccEEEecCCCCCCCCeeeeCC
Q 016822 170 YGMFSPKIGQLSKVPPKQRTPEAIAEAIEN----MKA-LDDPAFRGGFILEKVMGP-VSTGHLELRTRNPNDNPSVTFNY 243 (382)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~P-~s~G~V~L~~~d~~~~P~i~~~y 243 (382)
.+++..... ... . .+.++. ...+ ... .+....+...+...+++| .|||+|+|++.| ..|.|+++|
T Consensus 356 ~~~~~~~~~----~~~-~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y 426 (546)
T 1kdg_A 356 LNFWRAYSG----SDG-F-TRYAQG-TVRPGAASVNSSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPW 426 (546)
T ss_dssp EEEEEEEEC----TTS-C-EEEEEE-EEEESCSCCCCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCT
T ss_pred eEEEEccCC----CCc-c-hhhhhh-eecccccccccccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccc
Confidence 111110000 000 0 000000 0000 000 000001223455567788 999999999877 557789999
Q ss_pred CCChhhHHHHHHHHHHHHHHHcCcccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCccccc
Q 016822 244 FKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQ 323 (382)
Q Consensus 244 ~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~GTcr 323 (382)
+.+|.|++.++++++.+++++++.+...+. .| ....+++++++|++....+.+|++||||
T Consensus 427 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~---------------~p-----~~~~~~~~~~~~~~~~~~t~~H~~GTcr 486 (546)
T 1kdg_A 427 LVNPVDKTVLLQALHDVVSNIGSIPGLTMI---------------TP-----DVTQTLEEYVDAYDPATMNSNHWVSSTT 486 (546)
T ss_dssp TCSHHHHHHHHHHHHHHTTTGGGSTTCEEE---------------ES-----CTTSCHHHHHHHSCGGGGCCSCCBCTTC
T ss_pred cCCchHHHHHHHHHHHHHHHhcCCCccccc---------------CC-----CCCCCHHHHHHHHHHhcCccccccccee
Confidence 999999999999999999999876432211 02 2235788899999888889999999999
Q ss_pred CC-----cccCCCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHhh
Q 016822 324 VG-----KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSER 375 (382)
Q Consensus 324 MG-----sVVD~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~ 375 (382)
|| +|||++|||||++||||+|+||||+++++||++|+||||||+||.|+++.
T Consensus 487 MG~~~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~ 543 (546)
T 1kdg_A 487 IGSSPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALA 543 (546)
T ss_dssp BCSCTTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHST
T ss_pred cCCCCCCeeECCCCeEccCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhc
Confidence 99 79999999999999999999999999999999999999999999877643
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=3.5e-43 Score=358.16 Aligned_cols=288 Identities=18% Similarity=0.142 Sum_probs=189.6
Q ss_pred eecccccchhhhhccccceeeeeeecc--cC-ceeccCCccceEEeeccCCCCCeEEEEEEEeCCC---ceEEEEeecCC
Q 016822 8 CMARRLVGQYLIKMAKDTQLLICWSML--IP-VASLCSCMPPCIRFCSELKARPVAHGVVFRDATG---AKHRAYLKNGP 81 (382)
Q Consensus 8 ~~~~~~~~~~~~~~~~~t~~~~~~~~~--~p-~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G---~~~~v~~~~~a 81 (382)
|+..+.|...+... |.+......... .+ ++|++++.|+||++++ ++++|+||++.+.+| +.++++
T Consensus 206 ~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~---~g~~~~gV~~~~~~g~~~~~~~v~----- 276 (504)
T 1n4w_A 206 SALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTK---DGGYALTVEQKDTDGKLLATKEIS----- 276 (504)
T ss_dssp SGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECT---TSSEEEEEEEECTTCCEEEEEEEE-----
T ss_pred CcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECC---CCCEEEEEEEeCCCCccceeEEEe-----
Confidence 44444444445555 555433222211 34 8899999999999973 245999999986567 456676
Q ss_pred CceEEEeCCCcCChHHHHhhc-CCCcceeecCCCCCCCCCCCCCCeeEeecCCCccchhhhhhcccchhhHHHhccCccc
Q 016822 82 KNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENF 160 (382)
Q Consensus 82 ~~eVILaaGai~TP~LLl~SG-~~gi~~~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 160 (382)
+++||||||+|+||+|||+|| .-+||++ +++||+||+||+...+.+.... .. . .|. +
T Consensus 277 A~~VIlaaG~~~s~~lL~~Sg~ig~i~~~--~~~VG~nl~dh~~~~~~~~~~~-~~-----~-------------~~~-~ 334 (504)
T 1n4w_A 277 CRYLFLGAGSLGSTELLVRARDTGTLPNL--NSEVGAGWGPNGNIMTARANHM-WN-----P-------------TGA-H 334 (504)
T ss_dssp EEEEEECSHHHHHHHHHHHHHHTTSSTTC--CTTTTCCBBCTTCEEEEEECCT-TC-----C-------------CCS-C
T ss_pred eCEEEEccCCCCCHHHHHhccccCCCCCC--ChhhccccccCCcceeeeccCC-CC-----c-------------ccC-c
Confidence 379999999999999999999 7778865 4589999999998665443211 00 0 000 0
Q ss_pred ccCCCCCCccccccccccccccCCCCCCCHHHHHHHHHhhccCCCCCCcceeEEEeecccccccEEEecCCCCCCCCeee
Q 016822 161 AGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVT 240 (382)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~s~G~V~L~~~d~~~~P~i~ 240 (382)
.... ...++.. +. .+ ..|..+. .+. .+........+...+.+|.|+|+|+|+++|+ .|+
T Consensus 335 ~~~~---~~~~~~~-----~~-~~---~~~~~~~----~~~-~~~~~~~~~~~~~~~~~p~srG~V~L~s~~~----~i~ 393 (504)
T 1n4w_A 335 QSSI---PALGIDA-----WD-NS---DSSVFAE----IAP-MPAGLETWVSLYLAITKNPQRGTFVYDAATD----RAK 393 (504)
T ss_dssp CCSS---CCEEEEE-----CC-SS---TTCEEEE----EEC-CCCSSCCCEEEEEEEECCCCCBCEEEETTTT----EEE
T ss_pred CCCc---cEEEEec-----cC-CC---CCceEEE----ecc-CChHHHhhhhhheeeeccCCCcEEEecCCCC----ceE
Confidence 0000 0000000 00 00 0000000 000 0000001233455667899999999998654 799
Q ss_pred eCCCCChhhHHHHHHHHH-HHHHHHcCcccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCc
Q 016822 241 FNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYH 319 (382)
Q Consensus 241 ~~y~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~ 319 (382)
++|+.++ | +.+.++++ .+++|+++.+. +... ... .++ +++| ...+.+|++
T Consensus 394 ~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~--------------------~~~-~~~-~~~~---~~~~~~H~~ 444 (504)
T 1n4w_A 394 LNWTRDQ-N-APAVNAAKALFDRINKANGT--IYRY--------------------DLF-GTQ-LKAF---ADDFCYHPL 444 (504)
T ss_dssp ECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCC--------------------SSS-SSS-CCSE---ECSEESSCB
T ss_pred eccCCCc-C-HHHHHHHHHHHHHHHhccCC--CcCC--------------------chh-hhh-hhhh---ccCcccccc
Confidence 9999999 9 77888888 88999876553 1100 000 000 0001 345789999
Q ss_pred ccccCCcccCCCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHhhh
Q 016822 320 GGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERL 376 (382)
Q Consensus 320 GTcrMGsVVD~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~~ 376 (382)
||||||+|||++|||||++||||+|+|+||+++++||++|+||||||+||+|+++..
T Consensus 445 GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 445 GGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp CSSCTTTTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCceeeeEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999998876543
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=4.8e-42 Score=349.96 Aligned_cols=289 Identities=15% Similarity=0.092 Sum_probs=188.6
Q ss_pred Eeecccccchhhhhccccceeeeeeecc--cC-ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCc---eEEEEeecC
Q 016822 7 ICMARRLVGQYLIKMAKDTQLLICWSML--IP-VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGA---KHRAYLKNG 80 (382)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~--~p-~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~---~~~v~~~~~ 80 (382)
.|+..+.|...|-.. |.+...++.... .+ ++|++++.|+||++++ ++++|+||++.+.+|. .++++
T Consensus 210 ~~~~~g~C~~gc~~g-R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~---~g~~~~gV~~~~~~g~~~~~~~~~---- 281 (507)
T 1coy_A 210 KSGLGGEVIYGNNAG-KKSLDKTYLAQAAATGKLTITTLHRVTKVAPAT---GSGYSVTMEQIDEQGNVVATKVVT---- 281 (507)
T ss_dssp CSTTTTCSTTCCSSS-BCCTTTTHHHHHHHTTCEEEECSEEEEEEEECS---SSSEEEEEEEECTTSCEEEEEEEE----
T ss_pred CccccccccccCCCC-CcChHHHHHHHHHhcCCcEEEeCCEEEEEEECC---CCCEEEEEEEeCCCCcccccEEEE----
Confidence 355555555555566 666444322221 23 8899999999999973 1348999999865563 56676
Q ss_pred CCceEEEeCCCcCChHHHHhhc-CCCcceeecCCCCCCCCCCCCCCeeEeecCCCccchhhhhhcccchhhHHHhccCcc
Q 016822 81 PKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN 159 (382)
Q Consensus 81 a~~eVILaaGai~TP~LLl~SG-~~gi~~~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 159 (382)
+++||||||+|+||+|||+|| .-++| +.+++||+||+||+.......... + . ..|.
T Consensus 282 -A~~VIlaaGa~~sp~lL~~Sg~iG~lp--nl~d~VG~~l~~h~~~~~~~~~~~-----~-~-------------~~~~- 338 (507)
T 1coy_A 282 -ADRVFFAAGSVGTSKLLVSMKAQGHLP--NLSSQVGEGWGNNGNIMVGRANHM-----W-D-------------ATGS- 338 (507)
T ss_dssp -EEEEEECSHHHHHHHHHHHHHHTTSST--TSCTTTTCCBBCTTEEEEEEECCT-----T-S-------------CCCS-
T ss_pred -eCEEEEccCccCCHHHHHhcccCCCCC--ccChhhCCccccCCcccccccccc-----c-c-------------cccc-
Confidence 379999999999999999999 54566 456689999999986433211000 0 0 0010
Q ss_pred cccCCCCCCccccccccccccccCCCCCCCHHHHHHHHHhhccCCCCCCcceeEEEeecccccccEEEecCCCCCCCCee
Q 016822 160 FAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSV 239 (382)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~s~G~V~L~~~d~~~~P~i 239 (382)
+.... ...+... +. .+. .|+++..+ . .+............+.+|.++|+|+|+++|+ .|
T Consensus 339 ~~~~~---~~~~~~~-----~~-~~~---~~~~~~~~--~---~~~~~~~~~~~~~~~~~p~s~G~V~L~s~~~----~i 397 (507)
T 1coy_A 339 KQATI---PTMGIDN-----WA-DPT---APIFAEIA--P---LPAGLETYVSLYLAITKNPERARFQFNSGTG----KV 397 (507)
T ss_dssp CCCSS---CCEEEEC-----TT-CTT---SCEEEEEE--C---CCCSSCCCEEEEEEEECCCCCBCEEEETTTT----EE
T ss_pred cCCCc---ceEEEec-----cC-CCC---CCcEEEec--c---CCHHHhhheeeeEEEeeeCCCcEEEEccCCC----ce
Confidence 00000 0000000 00 000 00000000 0 0000001223445567899999999998654 89
Q ss_pred eeCCCCChhhHHHHHHHHH-HHHHHHcCcccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCC
Q 016822 240 TFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHY 318 (382)
Q Consensus 240 ~~~y~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~ 318 (382)
+++|+.++ | +.+.++++ .+++|+++.+. +...+ . ..+|+ ++| ...+.+|+
T Consensus 398 ~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~~----------------~----~~~d~--~~~---~~~~~~H~ 448 (507)
T 1coy_A 398 DLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IYRTD----------------L----FGVYY--KTW---GDDFTYHP 448 (507)
T ss_dssp EECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCSS----------------C----C--CC--CSS---BCSEESCC
T ss_pred eeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cccCc----------------c----cccch--hhh---cccccccc
Confidence 99999999 8 56777777 88999987652 22111 0 01121 222 34578999
Q ss_pred cccccCCcccCCCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHhhh
Q 016822 319 HGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERL 376 (382)
Q Consensus 319 ~GTcrMGsVVD~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~~ 376 (382)
+||||||+|||++|||||++||||+|+|+||+++++||++|+||||||+||+|+++++
T Consensus 449 ~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~~~ 506 (507)
T 1coy_A 449 LGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 506 (507)
T ss_dssp BCSSCTTTTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCcchhheECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999987764
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=1.6e-39 Score=338.50 Aligned_cols=280 Identities=13% Similarity=0.088 Sum_probs=194.3
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNI 106 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi 106 (382)
.++|++++.|++|++++ ++++++||++.+ .+|+.+++. +++||||+|++.||+||++|| .+||
T Consensus 274 nv~v~~~~~V~~i~~~~---~~~~v~GV~~~~~~~g~~~~i~-----A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i 345 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNA---LNSEIESLHIHDLISGDRFEIK-----ADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANP 345 (623)
T ss_dssp EEEEECSEEEEEEEECT---TSSCEEEEEEEETTTCCEEEEC-----EEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSC
T ss_pred CEEEEeCCEEEEEEEEC---CCCEEEEEEEEEcCCCcEEEEE-----CCEEEEcCCCcCCHHHHHhcCCCccccccccCC
Confidence 46789999999999973 246999999987 467777776 489999999999999999999 6788
Q ss_pred ceeecCCCCCCCCCCCCCCeeEeecCCCccchhhhhhcccchhhHHHhccCcccccCCCCCCccccccccccccccCCCC
Q 016822 107 TVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPK 186 (382)
Q Consensus 107 ~~~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (382)
++ ++|+||+||+||+...+.+.++++....+.. .|. ..|+ ..+. .+... .+...|..
T Consensus 346 ~~--~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~--------~~~--~~g~--~g~~----~~~~~-----~~~~~p~~ 402 (623)
T 3pl8_A 346 PE--LLPSLGSYITEQSLVFCQTVMSTELIDSVKS--------DMT--IRGT--PGEL----TYSVT-----YTPGASTN 402 (623)
T ss_dssp CS--SCTTTTBSCBCCCEEEEEEEECHHHHHHHTT--------TCE--EESC--TTST----TCEEE-----CCTTCTTC
T ss_pred CC--CCcccccchhhCcCceEEEEECCcccccccc--------ccc--cccc--CCCc----ceecc-----cccCcccc
Confidence 87 9999999999999988888776542111100 000 0121 0000 00000 00000000
Q ss_pred CCCHHHHHHH---HHhh---------ccC------C---CC----------------------CCcceeEEEeecccccc
Q 016822 187 QRTPEAIAEA---IENM---------KAL------D---DP----------------------AFRGGFILEKVMGPVST 223 (382)
Q Consensus 187 ~~~~~~~~~~---~~~~---------~~~------~---~~----------------------~~~~~~~~~~~~~P~s~ 223 (382)
...|.+.... +... .++ + .+ .....+.......|.++
T Consensus 403 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 482 (623)
T 3pl8_A 403 KHPDWWNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEE 482 (623)
T ss_dssp SSCHHHHHHHHHHHHHCTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEECCCCCTT
T ss_pred cCCchhhhhhhhhhhcccccccccccccccccccccccccCcchhhhhhhhccccccccccccceEEEEEEEEeeccCCC
Confidence 0111111100 0000 000 0 00 00001122345679999
Q ss_pred cEEEecC--CCCCCCCeeeeCCCCChh-hHHHHHHHHHHHHHHHcCcccccccccccchhhhhhcccCCCCcCCCCCCCC
Q 016822 224 GHLELRT--RNPNDNPSVTFNYFKEPE-DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNA 300 (382)
Q Consensus 224 G~V~L~~--~d~~~~P~i~~~y~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~ 300 (382)
|+|+|++ +|++|.|.++++|..+++ |++.++++++.+++++++.+....... + ..
T Consensus 483 n~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~--------------~------~~-- 540 (623)
T 3pl8_A 483 NKLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSL--------------P------QF-- 540 (623)
T ss_dssp CEEEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSC--------------S------EE--
T ss_pred CEEEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCch--------------h------hc--
Confidence 9999987 899999999999999999 999999999999999987654322100 0 00
Q ss_pred hHHHHHHHhccccccCCCcccccCC------ccc-CCCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHH
Q 016822 301 STSLEQFCRDTVMTIWHYHGGCQVG------KVV-DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILS 373 (382)
Q Consensus 301 d~~~~~~~~~~~~~~~H~~GTcrMG------sVV-D~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~ 373 (382)
....+++|++|||||| ||| |++|||||++||||+|+|+||+.+++||++|+||+|+|+|++|++
T Consensus 541 ---------~~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~ 611 (623)
T 3pl8_A 541 ---------MEPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQ 611 (623)
T ss_dssp ---------CCTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHH
T ss_pred ---------cCCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHH
Confidence 0124589999999999 687 999999999999999999999999999999999999999999987
Q ss_pred hhhh
Q 016822 374 ERLA 377 (382)
Q Consensus 374 ~~~~ 377 (382)
+...
T Consensus 612 ~~~~ 615 (623)
T 3pl8_A 612 NFTP 615 (623)
T ss_dssp HCCC
T ss_pred Hhhc
Confidence 7643
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.65 E-value=0.013 Score=58.89 Aligned_cols=56 Identities=9% Similarity=0.147 Sum_probs=44.8
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcC-ChHHHHh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG-SPQLLML 100 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~-TP~LLl~ 100 (382)
.+.+++++.|++|+.+ ++++++||.+.+ +|...++++ .|.||||+|++. ++.+|..
T Consensus 216 Gv~i~~~t~v~~L~~~----~~g~v~GV~~~~-~g~~~~i~A----~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 216 GVRAEYDMRVQTLVTD----DTGRVVGIVAKQ-YGKEVAVRA----RRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp TCEEECSEEEEEEEEC----TTCCEEEEEEEE-TTEEEEEEE----EEEEEECCCCCTTCHHHHHH
T ss_pred CCEEEecCEeEEEEEC----CCCcEEEEEEEE-CCcEEEEEe----CCeEEEeCCChhhCHHHHHH
Confidence 5778999999999986 257999999986 566667762 369999999998 7777655
No 13
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=93.26 E-value=0.12 Score=52.54 Aligned_cols=56 Identities=11% Similarity=0.029 Sum_probs=43.5
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcC-ChHHHHh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG-SPQLLML 100 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~-TP~LLl~ 100 (382)
.+.+++++.|++|+.+ +.++++||.+.+.+|+..+++ ++.||||+|.+. ++.+|..
T Consensus 269 gv~i~~~t~v~~l~~~----~~g~v~GV~~~~~~G~~~~i~-----A~~VVlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 269 GTDIRLNSRVVRILED----ASGKVTGVLVKGEYTGYYVIK-----ADAVVIAAGGFAKNNERVSK 325 (572)
T ss_dssp TCEEESSEEEEEEEEC------CCEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCHHHHHH
T ss_pred CCeEEecCEEEEEEEC----CCCeEEEEEEEeCCCcEEEEE-----cCEEEEeCCCCccCHHHHHH
Confidence 5778999999999876 227899999986567766676 489999999887 5666644
No 14
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=92.16 E-value=0.18 Score=51.10 Aligned_cols=54 Identities=7% Similarity=0.090 Sum_probs=42.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCCh-HHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP-QLL 98 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP-~LL 98 (382)
.+.+++++.|++|+.+ ++++++||.+.+.+|+..+++ ++.||||+|.+..- ++|
T Consensus 264 gv~i~~~~~v~~l~~~----~~g~v~Gv~~~~~~g~~~~i~-----A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 264 GIDTRLNSRVVKLVVN----DDHSVVGAVVHGKHTGYYMIG-----AKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp TCCEECSEEEEEEEEC----TTSBEEEEEEEETTTEEEEEE-----EEEEEECCCCCTTCHHHH
T ss_pred CCEEEeCCEEEEEEEC----CCCcEEEEEEEeCCCcEEEEE-----cCEEEEecCCcccCHHHH
Confidence 4678899999999876 227999999987667766676 48999999998764 444
No 15
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=91.38 E-value=0.29 Score=49.64 Aligned_cols=55 Identities=5% Similarity=0.058 Sum_probs=42.6
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCC-hHHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS-PQLLM 99 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~T-P~LLl 99 (382)
.+.+++++.|++|+.+ ++++++||.+.+.+|+..+++ ++.||||+|.+.. +.++.
T Consensus 269 gv~i~~~~~v~~l~~~----~~g~v~Gv~~~~~~g~~~~i~-----a~~VVlAtGg~~~n~~~~~ 324 (571)
T 1y0p_A 269 NIDLRMNTRGIEVLKD----DKGTVKGILVKGMYKGYYWVK-----ADAVILATGGFAKNNERVA 324 (571)
T ss_dssp TCEEESSEEEEEEEEC----TTSCEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCHHHHH
T ss_pred CCEEEeCCEeeEeEEc----CCCeEEEEEEEeCCCcEEEEE-----CCeEEEeCCCcccCHHHHH
Confidence 4678999999999876 237899999987567766676 4789999999864 55443
No 16
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=90.41 E-value=0.23 Score=49.05 Aligned_cols=52 Identities=10% Similarity=0.048 Sum_probs=33.7
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 101 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~S 101 (382)
..+|++++.|++|+.+ +++++||+.. +|+ ++. ++.||.+++.-.|.+.|+-.
T Consensus 235 Gg~I~~~~~V~~I~~~-----~~~~~gV~~~--~g~--~~~-----ad~VV~~a~~~~~~~~Ll~~ 286 (501)
T 4dgk_A 235 GGEVVLNARVSHMETT-----GNKIEAVHLE--DGR--RFL-----TQAVASNADVVHTYRDLLSQ 286 (501)
T ss_dssp TCEEECSCCEEEEEEE-----TTEEEEEEET--TSC--EEE-----CSCEEECCC-----------
T ss_pred CCceeeecceeEEEee-----CCeEEEEEec--CCc--EEE-----cCEEEECCCHHHHHHHhccc
Confidence 3568999999999997 7899999884 576 354 48999999998888777643
No 17
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=89.79 E-value=0.37 Score=49.56 Aligned_cols=49 Identities=14% Similarity=0.226 Sum_probs=40.6
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~T 94 (382)
.+.++.++.|++|+.+ +++++||.+.+ .+|+.++++ ++.||||+|.+..
T Consensus 169 gv~i~~~~~v~~Li~~-----~g~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 218 (621)
T 2h88_A 169 DTSYFVEYFALDLLME-----NGECRGVIALCIEDGTIHRFR-----AKNTVIATGGYGR 218 (621)
T ss_dssp CCEEEETEEEEEEEEE-----TTEEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred CCEEEEceEEEEEEEE-----CCEEEEEEEEEcCCCcEEEEE-----cCeEEECCCcccc
Confidence 4678999999999986 57999999986 467766776 4899999999874
No 18
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=89.44 E-value=0.48 Score=49.08 Aligned_cols=49 Identities=18% Similarity=0.155 Sum_probs=40.3
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~T 94 (382)
.+.++.++.|++|+.+ +++++||.+.+ .+|..+.++ ++.||||+|.+..
T Consensus 172 gv~i~~~~~v~~L~~~-----~g~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 221 (660)
T 2bs2_A 172 GVSIQDRKEAIALIHQ-----DGKCYGAVVRDLVTGDIIAYV-----AKGTLIATGGYGR 221 (660)
T ss_dssp TCEEECSEEEEEEEEE-----TTEEEEEEEEETTTCCEEEEE-----CSEEEECCCCCGG
T ss_pred CCEEEECcEEEEEEec-----CCEEEEEEEEECCCCcEEEEE-----cCEEEEccCcchh
Confidence 5678999999999886 57999999876 467766776 4899999999864
No 19
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=88.85 E-value=0.47 Score=48.20 Aligned_cols=56 Identities=14% Similarity=0.026 Sum_probs=43.2
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|++|..+ +++++||++.+. +|...+++ ++.||+|+|+. +.+|+...|
T Consensus 202 Ga~i~~~t~V~~l~~~-----~~~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~w-s~~l~~~~g 258 (571)
T 2rgh_A 202 GAYLVSKMKAVGFLYE-----GDQIVGVKARDLLTDEVIEIK-----AKLVINTSGPW-VDKVRNLNF 258 (571)
T ss_dssp TCEEESSEEEEEEEEE-----TTEEEEEEEEETTTCCEEEEE-----BSCEEECCGGG-HHHHHTTCC
T ss_pred CCeEEeccEEEEEEEe-----CCEEEEEEEEEcCCCCEEEEE-----cCEEEECCChh-HHHHHHhhc
Confidence 3567889999999886 568999999874 45555676 48999999976 777776554
No 20
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=88.75 E-value=0.47 Score=48.40 Aligned_cols=50 Identities=10% Similarity=0.016 Sum_probs=40.2
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~T 94 (382)
.+.++.++.|++|+.++ +++++||.+.+ .+|+.++++ ++.||||+|.+..
T Consensus 157 gv~i~~~~~v~~L~~~~----~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 157 HTTIFSEWYALDLVKNQ----DGAVVGCTALCIETGEVVYFK-----ARATVLATGGAGR 207 (588)
T ss_dssp TCEEEETEEEEEEEECT----TSCEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred CCEEEeCcEEEEEEECC----CCEEEEEEEEEcCCCeEEEEE-----cCEEEECCCCCcc
Confidence 56789999999998852 47899999986 467766776 4899999998764
No 21
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=87.16 E-value=0.71 Score=47.20 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=39.9
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCCh
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSP 95 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~TP 95 (382)
+.++.++.|++|+.+ +++++||.+.+ .+|+.++++ ++.||+|+|+....
T Consensus 150 v~i~~~~~v~~l~~~-----~g~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 150 IQRFDEHFVLDILVD-----DGHVRGLVAMNMMEGTLVQIR-----ANAVVMATGGAGRV 199 (602)
T ss_dssp EEEEETEEEEEEEEE-----TTEEEEEEEEETTTTEEEEEE-----CSCEEECCCCCGGG
T ss_pred cEEEeCCEEEEEEEe-----CCEEEEEEEEEcCCCcEEEEE-----cCeEEECCCCCccc
Confidence 788999999999886 57899998876 467766776 47899999988654
No 22
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=86.36 E-value=0.81 Score=46.30 Aligned_cols=56 Identities=20% Similarity=0.223 Sum_probs=44.3
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|++|..+ +++++||++.+. +|...+++ ++.||+|+|+. +.+|+...|
T Consensus 184 G~~i~~~~~V~~l~~~-----~g~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~~-s~~l~~~~g 240 (561)
T 3da1_A 184 GAVALNYMKVESFIYD-----QGKVVGVVAKDRLTDTTHTIY-----AKKVVNAAGPW-VDTLREKDR 240 (561)
T ss_dssp TCEEEESEEEEEEEEE-----TTEEEEEEEEETTTCCEEEEE-----EEEEEECCGGG-HHHHHHTTT
T ss_pred CCEEEcCCEEEEEEEc-----CCeEEEEEEEEcCCCceEEEE-----CCEEEECCCcc-hHHHHHhcC
Confidence 4567889999999886 678999999873 46666777 48999999974 777877765
No 23
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=85.97 E-value=0.83 Score=47.29 Aligned_cols=51 Identities=12% Similarity=0.012 Sum_probs=39.7
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALG 93 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~ 93 (382)
.+.++.++.|..|+.++. ..++++||.+.+ .+|..+.++ ++.||||+|.+.
T Consensus 182 gV~i~~~~~v~dLi~~~~--~~g~v~Gv~~~~~~~g~~~~i~-----Ak~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKN--TPNRIAGAVGFNLRANEVHIFK-----ANAMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEECSS--STTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBC
T ss_pred CcEEEEceEEEEEEEeCC--ccceEEEEEEEEcCCCcEEEEE-----eCEEEECCCccc
Confidence 477899999999998721 115999999876 357767776 489999999876
No 24
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=85.85 E-value=1.1 Score=46.29 Aligned_cols=52 Identities=8% Similarity=-0.139 Sum_probs=39.5
Q ss_pred Cc-eeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCC
Q 016822 36 PV-ASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 36 p~-~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~T 94 (382)
.+ .++.++.|++|+.++. ..++++||.+.+ .+|..++++ ++.||||+|....
T Consensus 166 gv~~i~~~~~v~~L~~~~~--~~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNN--DPNAVAGAVGFSVREPKFYVFK-----AKAVILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECTT--CTTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcCC--ccceeEEEEEEEecCCcEEEEE-----cCEEEECCCcccc
Confidence 57 7899999999988620 013999999865 457666676 4999999998875
No 25
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=84.63 E-value=1 Score=45.35 Aligned_cols=51 Identities=6% Similarity=0.047 Sum_probs=39.2
Q ss_pred CceeccCCccceEEeeccCCCC-----CeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCC
Q 016822 36 PVASLCSCMPPCIRFCSELKAR-----PVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~-----~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~T 94 (382)
.+.+++++.|++|+.++. + ++++||.+.+ .+|+.++++ ++.||||+|....
T Consensus 153 gv~i~~~~~v~~L~~~~~---g~~~~~~~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~~~ 209 (540)
T 1chu_A 153 NIRVLERTNAVDLIVSDK---IGLPGTRRVVGAWVWNRNKETVETCH-----AKAVVLATGGASK 209 (540)
T ss_dssp TEEEECSEEEEEEEEGGG---TTCCSSCBEEEEEEEETTTTEEEEEE-----CSEEEECCCCCGG
T ss_pred CCEEEeCcEEEEEEEcCC---CCcccCCEEEEEEEEEcCCCcEEEEE-----cCeEEECCCCccc
Confidence 477899999999998421 2 2899999986 357666676 4899999998763
No 26
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=82.86 E-value=1.6 Score=43.37 Aligned_cols=48 Identities=21% Similarity=0.116 Sum_probs=39.3
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 93 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~ 93 (382)
.+.++.++.|++|..+ +++++||.+.+.+|...+++ ++.||.|.|.-.
T Consensus 125 Gv~i~~~~~V~~v~~~-----~~~v~gv~~~~~dG~~~~i~-----ad~VI~AdG~~S 172 (512)
T 3e1t_A 125 GVDVRERHEVIDVLFE-----GERAVGVRYRNTEGVELMAH-----ARFIVDASGNRT 172 (512)
T ss_dssp TCEEESSCEEEEEEEE-----TTEEEEEEEECSSSCEEEEE-----EEEEEECCCTTC
T ss_pred CCEEEcCCEEEEEEEE-----CCEEEEEEEEeCCCCEEEEE-----cCEEEECCCcch
Confidence 4668899999999876 57899999987778766776 489999999754
No 27
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=81.86 E-value=0.88 Score=43.62 Aligned_cols=49 Identities=12% Similarity=-0.025 Sum_probs=38.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 99 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl 99 (382)
.+.+++++.|++|..+ +++++||.. +|. ++. ++.||+|+++-.+++||-
T Consensus 210 G~~i~~~~~V~~i~~~-----~~~~~gv~~---~g~--~~~-----ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 210 GGKIHTGQEVSKILIE-----NGKAAGIIA---DDR--IHD-----ADLVISNLGHAATAVLCS 258 (425)
T ss_dssp TCEEECSCCEEEEEEE-----TTEEEEEEE---TTE--EEE-----CSEEEECSCHHHHHHHTT
T ss_pred CCEEEECCceeEEEEE-----CCEEEEEEE---CCE--EEE-----CCEEEECCCHHHHHHhcC
Confidence 3578999999999987 578999876 354 455 489999999888887554
No 28
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=78.58 E-value=1.5 Score=42.23 Aligned_cols=48 Identities=21% Similarity=0.155 Sum_probs=36.0
Q ss_pred CceeccCC---ccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHH
Q 016822 36 PVASLCSC---MPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 98 (382)
Q Consensus 36 p~~v~t~a---~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LL 98 (382)
.+.+++++ .|++|..+ +++++||+.. +|. +++ ++.||+|+|+. |++|+
T Consensus 175 Gv~i~~~t~~~~V~~i~~~-----~~~v~gV~t~--~G~--~i~-----Ad~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 175 GVKFVTGTPQGRVVTLIFE-----NNDVKGAVTA--DGK--IWR-----AERTFLCAGAS-AGQFL 225 (438)
T ss_dssp TCEEEESTTTTCEEEEEEE-----TTEEEEEEET--TTE--EEE-----CSEEEECCGGG-GGGTS
T ss_pred CCEEEeCCcCceEEEEEec-----CCeEEEEEEC--CCC--EEE-----CCEEEECCCCC-hhhhc
Confidence 56788998 99999886 5688888773 563 465 48999999986 45444
No 29
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=77.68 E-value=2.7 Score=40.82 Aligned_cols=49 Identities=16% Similarity=0.095 Sum_probs=38.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~T 94 (382)
.+.++.++.|+.|..+ +++++||.+.+. +|+..+++ ++.||.|.|+-..
T Consensus 114 gv~i~~~~~v~~i~~~-----~~~v~gv~~~~~~~G~~~~~~-----ad~VV~AdG~~s~ 163 (453)
T 3atr_A 114 GVEIWDLTTAMKPIFE-----DGYVKGAVLFNRRTNEELTVY-----SKVVVEATGYSRS 163 (453)
T ss_dssp TCEEESSEEEEEEEEE-----TTEEEEEEEEETTTTEEEEEE-----CSEEEECCGGGCT
T ss_pred CCEEEeCcEEEEEEEE-----CCEEEEEEEEEcCCCceEEEE-----cCEEEECcCCchh
Confidence 3668889999999876 568999999765 67656676 5899999997543
No 30
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=76.50 E-value=1.8 Score=40.10 Aligned_cols=53 Identities=13% Similarity=-0.003 Sum_probs=37.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 101 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~S 101 (382)
.+.+++++.|++|..++ ++ +..|.. .+|+..+++ ++.||+|+|+- |++|+...
T Consensus 164 Gv~i~~~~~v~~i~~~~----~~-~~~v~~--~~g~~~~~~-----a~~VV~A~G~~-s~~l~~~~ 216 (369)
T 3dme_A 164 GAQLVFHTPLIAGRVRP----EG-GFELDF--GGAEPMTLS-----CRVLINAAGLH-APGLARRI 216 (369)
T ss_dssp TCEEECSCCEEEEEECT----TS-SEEEEE--CTTSCEEEE-----EEEEEECCGGG-HHHHHHTE
T ss_pred CCEEECCCEEEEEEEcC----Cc-eEEEEE--CCCceeEEE-----eCEEEECCCcc-hHHHHHHh
Confidence 46678999999998762 22 233443 457555676 48999999986 77777665
No 31
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=73.62 E-value=5.2 Score=37.52 Aligned_cols=47 Identities=9% Similarity=-0.031 Sum_probs=36.0
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 93 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~ 93 (382)
.+.++.++.|++|..+ +++++||.+.+ .+...++. ++.||.|.|+-.
T Consensus 116 gv~i~~~~~v~~i~~~-----~~~v~gv~~~~-~~~~~~~~-----a~~vV~A~G~~s 162 (397)
T 3cgv_A 116 GADVWVKSPALGVIKE-----NGKVAGAKIRH-NNEIVDVR-----AKMVIAADGFES 162 (397)
T ss_dssp TCEEESSCCEEEEEEE-----TTEEEEEEEEE-TTEEEEEE-----EEEEEECCCTTC
T ss_pred CCEEEECCEEEEEEEe-----CCEEEEEEEEE-CCeEEEEE-----cCEEEECCCcch
Confidence 4567899999999876 57899999976 34445676 489999999654
No 32
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=71.35 E-value=3.8 Score=40.52 Aligned_cols=52 Identities=17% Similarity=0.034 Sum_probs=39.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCChHHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 99 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl 99 (382)
.+.+++++.|++|..+ + ++.+|++.+ .+|+..+++ ++.||+|+|+. +.+|+.
T Consensus 163 Gv~i~~~~~V~~l~~~-----~-~~~~V~~~d~~~G~~~~i~-----A~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 163 GGEVLTRTRATSARRE-----N-GLWIVEAEDIDTGKKYSWQ-----ARGLVNATGPW-VKQFFD 215 (501)
T ss_dssp TCEEECSEEEEEEEEE-----T-TEEEEEEEETTTCCEEEEE-----ESCEEECCGGG-HHHHHH
T ss_pred CCEEEcCcEEEEEEEe-----C-CEEEEEEEECCCCCEEEEE-----CCEEEECCChh-HHHHHH
Confidence 3567889999999875 3 578898876 357666777 48999999986 666665
No 33
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=69.63 E-value=6.4 Score=35.58 Aligned_cols=47 Identities=17% Similarity=0.000 Sum_probs=35.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-------C---CceEEEEeecCCCceEEEeCCCc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-------T---GAKHRAYLKNGPKNEIIVSAGAL 92 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-------~---G~~~~v~~~~~a~~eVILaaGai 92 (382)
.+.+++++.|++|..+ +++++||.+.+. + |...++. ++.||+|+|..
T Consensus 134 gv~i~~~~~V~~i~~~-----~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~-----ad~VV~AtG~~ 190 (284)
T 1rp0_A 134 NVKLFNAVAAEDLIVK-----GNRVGGVVTNWALVAQNHHTQSCMDPNVME-----AKIVVSSCGHD 190 (284)
T ss_dssp TEEEEETEEEEEEEEE-----TTEEEEEEEEEHHHHTCTTTSSCCCCEEEE-----EEEEEECCCSS
T ss_pred CCEEEcCcEEEEEEec-----CCeEEEEEEeccccccccCccccCceEEEE-----CCEEEECCCCc
Confidence 4678899999999876 568999988631 2 3445666 48999999964
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=68.66 E-value=5.4 Score=37.34 Aligned_cols=51 Identities=12% Similarity=0.024 Sum_probs=36.9
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.++.++.|++|..+ +++++||+. .+| +++ ++.||+|+|+. |++|+...|
T Consensus 163 Gv~i~~~~~v~~i~~~-----~~~v~gv~~--~~g---~i~-----a~~VV~A~G~~-s~~l~~~~g 213 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIE-----NNEIKGVKT--NKG---IIK-----TGIVVNATNAW-ANLINAMAG 213 (382)
T ss_dssp TCEEECSCCEEEEEES-----SSBEEEEEE--TTE---EEE-----CSEEEECCGGG-HHHHHHHHT
T ss_pred CCEEECCceEEEEEEE-----CCEEEEEEE--CCc---EEE-----CCEEEECcchh-HHHHHHHcC
Confidence 4567889999999875 457788765 345 465 48999999976 556666554
No 35
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=68.42 E-value=7.8 Score=37.55 Aligned_cols=47 Identities=19% Similarity=0.287 Sum_probs=36.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 96 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~ 96 (382)
.+.+++++.|++|..+ ++++.+|+.. +|+ +++ ++.||+|+|+...|.
T Consensus 148 GV~i~~~~~V~~i~~~-----~~~v~~V~~~--~G~--~i~-----Ad~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 148 GVKIRTNTPVETIEYE-----NGQTKAVILQ--TGE--VLE-----TNHVVIAVGGKSVPQ 194 (447)
T ss_dssp TCEEECSCCEEEEEEE-----TTEEEEEEET--TCC--EEE-----CSCEEECCCCSSSGG
T ss_pred CCEEEeCcEEEEEEec-----CCcEEEEEEC--CCC--EEE-----CCEEEECCCCCcCCC
Confidence 4678899999999876 4677888763 564 465 489999999998774
No 36
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=66.51 E-value=4.5 Score=36.81 Aligned_cols=57 Identities=18% Similarity=0.226 Sum_probs=41.3
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|.+|.-+ ++++++|.+.+ .+|+..++. .+.||+|.|..-++.+|..+|
T Consensus 204 gv~i~~~~~v~~i~~~-----~~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~g 261 (319)
T 3cty_A 204 NIPYIMNAQVTEIVGD-----GKKVTGVKYKDRTTGEEKLIE-----TDGVFIYVGLIPQTSFLKDSG 261 (319)
T ss_dssp TCCEECSEEEEEEEES-----SSSEEEEEEEETTTCCEEEEC-----CSEEEECCCEEECCGGGTTSC
T ss_pred CcEEEcCCeEEEEecC-----CceEEEEEEEEcCCCceEEEe-----cCEEEEeeCCccChHHHhhcc
Confidence 4567889999988654 45688999975 257655665 589999999877766665443
No 37
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=65.73 E-value=9.4 Score=35.36 Aligned_cols=56 Identities=14% Similarity=0.107 Sum_probs=40.9
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
+.+++++.|.+|.-+ ++++++|.+...+|+..++. .+.||+|.|.--+..+|..+|
T Consensus 217 v~i~~~~~v~~i~~~-----~~~v~~v~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 217 IDVYLETEVASIEES-----NGVLTRVHLRSSDGSKWTVE-----ADRLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp EEEESSEEEEEEEEE-----TTEEEEEEEEETTCCEEEEE-----CSEEEECCCBCCSCGGGGGSS
T ss_pred eEEEcCcCHHHhccC-----CCceEEEEEEecCCCeEEEe-----CCEEEECCCCCCCHHHHHhhc
Confidence 667889999998765 46788998874467656665 489999999665555665444
No 38
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=65.31 E-value=5.6 Score=35.80 Aligned_cols=55 Identities=13% Similarity=0.003 Sum_probs=41.7
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML 100 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~ 100 (382)
.+.+++++.|.+|.-+ +++.++|.+...+|+..++. .+.||+|.|..-++.+|..
T Consensus 197 gv~~~~~~~v~~i~~~-----~~~~~~v~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~ 251 (315)
T 3r9u_A 197 KIELITSASVDEVYGD-----KMGVAGVKVKLKDGSIRDLN-----VPGIFTFVGLNVRNEILKQ 251 (315)
T ss_dssp TEEEECSCEEEEEEEE-----TTEEEEEEEECTTSCEEEEC-----CSCEEECSCEEECCGGGBC
T ss_pred CeEEEeCcEEEEEEcC-----CCcEEEEEEEcCCCCeEEee-----cCeEEEEEcCCCCchhhhc
Confidence 4667889999999765 56899999975567766665 5899999997766655544
No 39
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=64.28 E-value=6 Score=35.72 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=39.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLL 98 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~LL 98 (382)
.+.+++++.|.+|.-+ ++++++|++.+. +|+..++. .+.||+|.|...++.+|
T Consensus 194 gv~v~~~~~v~~i~~~-----~~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 194 NVDIILNAQTTEVKGD-----GSKVVGLEYRDRVSGDIHNIE-----LAGIFVQIGLLPNTNWL 247 (310)
T ss_dssp TEEEESSEEEEEEEES-----SSSEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CeEEecCCceEEEEcC-----CCcEEEEEEEECCCCcEEEEE-----cCEEEEeeCCccCchHH
Confidence 4667888899988643 467889999863 46656665 48999999977665554
No 40
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=62.65 E-value=6.1 Score=38.03 Aligned_cols=56 Identities=20% Similarity=0.178 Sum_probs=36.9
Q ss_pred CceeccCCccceEEeec----------cCCCCCeEEEEEEEeCCCceEEE--EeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCS----------ELKARPVAHGVVFRDATGAKHRA--YLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~----------~~~~~~rAtGV~~~~~~G~~~~v--~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|++|..+. ...+++++++|.. .+| ++ + ++.||+|+|+. +++|+-..|
T Consensus 195 Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t--~~g---~i~~~-----Ad~VV~AtG~~-s~~l~~~~g 262 (448)
T 3axb_A 195 GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVL--SDG---TRVEV-----GEKLVVAAGVW-SNRLLNPLG 262 (448)
T ss_dssp TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEE--TTS---CEEEE-----EEEEEECCGGG-HHHHHGGGT
T ss_pred CCEEEcCCeEEEEEecccccccccccccccCCCceEEEEe--CCC---EEeec-----CCEEEECCCcC-HHHHHHHcC
Confidence 46678899999998720 0001456777764 356 25 5 38999999986 677776544
No 41
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=62.27 E-value=8 Score=35.86 Aligned_cols=50 Identities=24% Similarity=0.235 Sum_probs=34.2
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|++|..+ +++ ++| ...+| +++ ++.||+|+|+- |++|+...|
T Consensus 168 Gv~i~~~~~V~~i~~~-----~~~-~~V--~t~~g---~i~-----a~~VV~A~G~~-s~~l~~~~g 217 (381)
T 3nyc_A 168 QGQVLCNHEALEIRRV-----DGA-WEV--RCDAG---SYR-----AAVLVNAAGAW-CDAIAGLAG 217 (381)
T ss_dssp TCEEESSCCCCEEEEE-----TTE-EEE--ECSSE---EEE-----ESEEEECCGGG-HHHHHHHHT
T ss_pred CCEEEcCCEEEEEEEe-----CCe-EEE--EeCCC---EEE-----cCEEEECCChh-HHHHHHHhC
Confidence 4567899999999876 333 344 33344 465 48999999975 667776654
No 42
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=58.52 E-value=11 Score=35.66 Aligned_cols=46 Identities=20% Similarity=0.099 Sum_probs=33.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 92 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai 92 (382)
.+.++.++.|+.|..+ ++..+ |.+.+.+|...+++ ++.||.|.|.-
T Consensus 120 gv~i~~~~~v~~i~~~-----~~~~~-v~v~~~~g~~~~~~-----a~~vV~A~G~~ 165 (421)
T 3nix_A 120 GVDVEYEVGVTDIKFF-----GTDSV-TTIEDINGNKREIE-----ARFIIDASGYG 165 (421)
T ss_dssp TCEEECSEEEEEEEEE-----TTEEE-EEEEETTSCEEEEE-----EEEEEECCGGG
T ss_pred CCEEEcCCEEEEEEEe-----CCEEE-EEEEcCCCCEEEEE-----cCEEEECCCCc
Confidence 4667889999999876 22222 55655678766776 48999999954
No 43
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=57.74 E-value=8.6 Score=34.90 Aligned_cols=54 Identities=4% Similarity=0.060 Sum_probs=40.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChHHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 99 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~LLl 99 (382)
.+.+++++.|.+|.-+ ++++++|++.+. +|...++. .+.||+|.|..-++.+|.
T Consensus 223 gv~i~~~~~v~~i~~~-----~~~~~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~~~ 277 (338)
T 3itj_A 223 KIEILYNTVALEAKGD-----GKLLNALRIKNTKKNEETDLP-----VSGLFYAIGHTPATKIVA 277 (338)
T ss_dssp TEEEECSEEEEEEEES-----SSSEEEEEEEETTTTEEEEEE-----CSEEEECSCEEECCGGGB
T ss_pred CeEEeecceeEEEEcc-----cCcEEEEEEEECCCCceEEEE-----eCEEEEEeCCCCChhHhh
Confidence 5667889999998754 567899999863 35555665 489999999876665543
No 44
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=57.44 E-value=11 Score=38.02 Aligned_cols=50 Identities=20% Similarity=0.204 Sum_probs=37.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe----CCCce-------EEEEeecCCCceEEEeCCCcCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD----ATGAK-------HRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~----~~G~~-------~~v~~~~~a~~eVILaaGai~T 94 (382)
.+.++.++.|+.|..++ +++++||.+.+ .+|+. .+++ ++.||+|.|+-..
T Consensus 158 Gv~i~~g~~v~~l~~~~----~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~-----Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 158 GVEVYPGYAAAEILFHE----DGSVKGIATNDVGIQKDGAPKTTFERGLELH-----AKVTIFAEGCHGH 218 (584)
T ss_dssp TCEEETTCCEEEEEECT----TSSEEEEEECCEEECTTSCEEEEEECCCEEE-----CSEEEECCCTTCH
T ss_pred CCEEEcCCEEEEEEEcC----CCCEEEEEeCCccccCCCCcccccCCceEEE-----CCEEEEeeCCCch
Confidence 46788999999998862 46889998853 34542 3565 5999999998765
No 45
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=57.08 E-value=20 Score=32.11 Aligned_cols=56 Identities=18% Similarity=0.153 Sum_probs=42.3
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|.+|.-+ ++..+|++.+ .+|+..++. .+.||+|.|..-+..+|..+|
T Consensus 204 gv~~~~~~~v~~i~~~------~~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~g 260 (323)
T 3f8d_A 204 NVEFVLNSVVKEIKGD------KVVKQVVVENLKTGEIKELN-----VNGVFIEIGFDPPTDFAKSNG 260 (323)
T ss_dssp TEEEECSEEEEEEEES------SSEEEEEEEETTTCCEEEEE-----CSEEEECCCEECCHHHHHHTT
T ss_pred CcEEEeCCEEEEEecc------CceeEEEEEECCCCceEEEE-----cCEEEEEECCCCChhHHhhcC
Confidence 4667888888888643 4678898876 347666665 489999999888877887776
No 46
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=56.17 E-value=10 Score=35.49 Aligned_cols=51 Identities=16% Similarity=0.158 Sum_probs=36.2
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.++.++.|++|..+ ++++++|+. .+| +++ ++.||+|+|+. ++.|+...|
T Consensus 188 g~~i~~~~~v~~i~~~-----~~~~~~v~~--~~g---~~~-----a~~vV~a~G~~-s~~l~~~~g 238 (405)
T 2gag_B 188 GVDIIQNCEVTGFIKD-----GEKVTGVKT--TRG---TIH-----AGKVALAGAGH-SSVLAEMAG 238 (405)
T ss_dssp TCEEECSCCEEEEEES-----SSBEEEEEE--TTC---CEE-----EEEEEECCGGG-HHHHHHHHT
T ss_pred CCEEEcCCeEEEEEEe-----CCEEEEEEe--CCc---eEE-----CCEEEECCchh-HHHHHHHcC
Confidence 3567889999999875 456777765 345 355 38999999975 456666555
No 47
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=53.47 E-value=16 Score=32.70 Aligned_cols=53 Identities=11% Similarity=0.058 Sum_probs=33.7
Q ss_pred cccCCCCeEeeeCCeEEeec-ccCCCCCCCChHHHHHHHHHHHHHHHHHhhhhccCC
Q 016822 326 KVVDHDYKVLGVDALRVIDG-STFYYSPGTNPQATVMMLGRYMGVRILSERLASNDS 381 (382)
Q Consensus 326 sVVD~~~rV~gv~NL~VvDa-SvfP~~~~~Np~~Ti~alA~r~A~~i~~~~~~~~~~ 381 (382)
=.||+++|. .++|||+++- .-.| +........+.-|..+|..|.+...+++..
T Consensus 269 i~vd~~~~t-~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~ 322 (323)
T 3f8d_A 269 IKVDEWMRT-SVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRYVTEKKGK 322 (323)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EecCCCcee-cCCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHHHHHhhcc
Confidence 367998886 8999999754 4444 233445556666777787777665555443
No 48
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=52.79 E-value=18 Score=34.31 Aligned_cols=53 Identities=15% Similarity=0.173 Sum_probs=41.5
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|++|.-+ ++++++|++. +|+ ++. ++.||+|.|..-+..||..+|
T Consensus 198 GV~i~~~~~v~~i~~~-----~~~v~~V~~~--dG~--~i~-----aD~Vv~a~G~~p~~~l~~~~g 250 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAE-----GDRVTGVVLS--DGN--TLP-----CDLVVVGVGVIPNVEIAAAAG 250 (404)
T ss_dssp TCEEECSCCEEEEEEE-----TTEEEEEEET--TSC--EEE-----CSEEEECCCEEECCHHHHHTT
T ss_pred CcEEEECCEEEEEEec-----CCcEEEEEeC--CCC--EEE-----cCEEEECcCCccCHHHHHhCC
Confidence 4667899999999765 5688888874 565 354 489999999988878887777
No 49
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=52.69 E-value=12 Score=33.85 Aligned_cols=54 Identities=11% Similarity=0.028 Sum_probs=38.9
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-C-CceEEEEeecCCCceEEEeCCCcCChHHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-T-GAKHRAYLKNGPKNEIIVSAGALGSPQLLM 99 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~-G~~~~v~~~~~a~~eVILaaGai~TP~LLl 99 (382)
.+.+++++.|.+|.-+ ++++++|++.+. + |...++. .+.||+|.|..-++.+|.
T Consensus 198 gv~i~~~~~v~~i~~~-----~~~v~~v~~~~~~~~g~~~~i~-----~D~vv~a~G~~p~~~~~~ 253 (320)
T 1trb_A 198 NIILHTNRTLEEVTGD-----QMGVTGVRLRDTQNSDNIESLD-----VAGLFVAIGHSPNTAIFE 253 (320)
T ss_dssp SEEEECSCEEEEEEEC-----SSSEEEEEEECCTTCCCCEEEE-----CSEEEECSCEEESCGGGT
T ss_pred CeEEEcCceeEEEEcC-----CCceEEEEEEeccCCCceEEEE-----cCEEEEEeCCCCChHHhc
Confidence 4667889999998754 457889999752 2 5545665 489999999776665543
No 50
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=51.86 E-value=14 Score=35.13 Aligned_cols=53 Identities=21% Similarity=0.221 Sum_probs=41.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|++|.-+ ++++++|++. +|+ ++. ++.||+|.|..-+..+|..+|
T Consensus 208 GV~i~~~~~v~~i~~~-----~~~v~~v~l~--dG~--~i~-----aD~Vv~a~G~~p~~~l~~~~g 260 (415)
T 3lxd_A 208 GVDLRTGAAMDCIEGD-----GTKVTGVRMQ--DGS--VIP-----ADIVIVGIGIVPCVGALISAG 260 (415)
T ss_dssp TCEEEETCCEEEEEES-----SSBEEEEEES--SSC--EEE-----CSEEEECSCCEESCHHHHHTT
T ss_pred CCEEEECCEEEEEEec-----CCcEEEEEeC--CCC--EEE-----cCEEEECCCCccChHHHHhCC
Confidence 4667889999999754 5688888884 465 354 489999999988888887777
No 51
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=50.63 E-value=20 Score=35.37 Aligned_cols=57 Identities=16% Similarity=0.116 Sum_probs=40.8
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChH-HHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ-LLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~-LLl~SG 102 (382)
.+.+++++.|++|.-+ ++++++|+.+...+|+ .++. ++.||+|+|.--+.. +|..+|
T Consensus 269 GV~i~~~~~V~~i~~~----~~~~v~~~~v~~~~G~-~~i~-----aD~Vv~A~G~~p~~~~~l~~~g 326 (523)
T 1mo9_A 269 GMEIISGSNVTRIEED----ANGRVQAVVAMTPNGE-MRIE-----TDFVFLGLGEQPRSAELAKILG 326 (523)
T ss_dssp TCEEESSCEEEEEEEC----TTSBEEEEEEEETTEE-EEEE-----CSCEEECCCCEECCHHHHHHHT
T ss_pred CcEEEECCEEEEEEEc----CCCceEEEEEEECCCc-EEEE-----cCEEEECcCCccCCccCHHHcC
Confidence 4667899999999754 2456767766655564 3455 489999999887776 676666
No 52
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=50.48 E-value=7.2 Score=38.06 Aligned_cols=42 Identities=10% Similarity=0.041 Sum_probs=22.7
Q ss_pred CeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHhhhh
Q 016822 332 YKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLA 377 (382)
Q Consensus 332 ~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~~~ 377 (382)
.+.-.++|||.+.+|++|-. + ..-++.-+..+|+.|+++..+
T Consensus 452 ~~~t~i~gLyl~G~~t~pG~--G--v~ga~~SG~~aA~~il~dL~g 493 (501)
T 4dgk_A 452 NRDKTITNLYLVGAGTHPGA--G--IPGVIGSAKATAGLMLEDLIG 493 (501)
T ss_dssp ----CCTTEEECCCH----------HHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCEEEECCCCCCcc--c--HHHHHHHHHHHHHHHHHHhcC
Confidence 34567899999999999842 1 112334478888888876543
No 53
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=50.16 E-value=18 Score=33.86 Aligned_cols=48 Identities=10% Similarity=0.028 Sum_probs=31.6
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML 100 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~ 100 (382)
.+.+++++.|++|..+ ++. |.+...+| +++ ++.||+|+|+. +++|+-.
T Consensus 167 Gv~i~~~~~V~~i~~~-----~~~---v~v~t~~g---~i~-----a~~VV~A~G~~-s~~l~~~ 214 (397)
T 2oln_A 167 GATLRAGETVTELVPD-----ADG---VSVTTDRG---TYR-----AGKVVLACGPY-TNDLLEP 214 (397)
T ss_dssp TCEEEESCCEEEEEEE-----TTE---EEEEESSC---EEE-----EEEEEECCGGG-HHHHHGG
T ss_pred CCEEECCCEEEEEEEc-----CCe---EEEEECCC---EEE-----cCEEEEcCCcC-hHHHhhh
Confidence 4567889999999865 233 44444334 465 38899999984 5565543
No 54
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=49.47 E-value=14 Score=36.61 Aligned_cols=53 Identities=21% Similarity=0.259 Sum_probs=39.2
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCChHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 98 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~TP~LL 98 (382)
.+.+++++.|++|.-+ ++++++|.+.+ .+|+..++. ...||+|.|..-+..+|
T Consensus 405 gV~v~~~~~v~~i~~~-----~~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 405 NVDIILNAQTTEVKGD-----GSKVVGLEYRDRVSGDIHSVA-----LAGIFVQIGLLPNTHWL 458 (521)
T ss_dssp TEEEECSEEEEEEEEC-----SSSEEEEEEEETTTCCEEEEE-----CSEEEECCCEEESCGGG
T ss_pred CcEEEeCCEEEEEEcC-----CCcEEEEEEEeCCCCceEEEE-----cCEEEECcCCCCCchHH
Confidence 4677888999888643 56889999987 357666676 48999999977555544
No 55
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=49.36 E-value=27 Score=32.12 Aligned_cols=45 Identities=9% Similarity=-0.015 Sum_probs=33.9
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 91 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGa 91 (382)
.+.++.++.|+.+..+ ++++++|.... +|...+++ ++.||-|-|+
T Consensus 116 G~~~~~~~~v~~~~~~-----~~~~~~v~~~~-~~~~~~~~-----a~~vIgAdG~ 160 (397)
T 3oz2_A 116 GADVWVKSPALGVIKE-----NGKVAGAKIRH-NNEIVDVR-----AKMVIAADGF 160 (397)
T ss_dssp TCEEESSCCEEEEEEE-----TTEEEEEEEEE-TTEEEEEE-----EEEEEECCCT
T ss_pred CcEEeeeeeeeeeeec-----cceeeeeeecc-cccceEEE-----EeEEEeCCcc
Confidence 3557889999998876 67899998875 56667777 3777777775
No 56
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=48.39 E-value=18 Score=34.79 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=32.7
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 96 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~ 96 (382)
.+.+++++.|++|..+ ++ ++.+...+| +++ ++.||+|+|+...|+
T Consensus 146 Gv~i~~~~~V~~i~~~-----~~---~~~V~~~~g---~i~-----ad~VIlAtG~~S~p~ 190 (417)
T 3v76_A 146 GVQLRLETSIGEVERT-----AS---GFRVTTSAG---TVD-----AASLVVASGGKSIPK 190 (417)
T ss_dssp TCEEECSCCEEEEEEE-----TT---EEEEEETTE---EEE-----ESEEEECCCCSSCGG
T ss_pred CCEEEECCEEEEEEEe-----CC---EEEEEECCc---EEE-----eeEEEECCCCccCCC
Confidence 5678899999999876 22 245544445 455 489999999998775
No 57
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=48.15 E-value=19 Score=37.94 Aligned_cols=51 Identities=20% Similarity=0.120 Sum_probs=37.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.++.++.|++|..+ ++++++|+. .+| +++ ++.||+|+|+- +++|+...|
T Consensus 165 Gv~i~~~t~V~~i~~~-----~~~v~~V~t--~~G---~i~-----Ad~VV~AaG~~-s~~l~~~~g 215 (830)
T 1pj5_A 165 GVTYRGSTTVTGIEQS-----GGRVTGVQT--ADG---VIP-----ADIVVSCAGFW-GAKIGAMIG 215 (830)
T ss_dssp TCEEECSCCEEEEEEE-----TTEEEEEEE--TTE---EEE-----CSEEEECCGGG-HHHHHHTTT
T ss_pred CCEEECCceEEEEEEe-----CCEEEEEEE--CCc---EEE-----CCEEEECCccc-hHHHHHHhC
Confidence 3567889999999876 467777765 244 465 48999999986 577766655
No 58
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=47.72 E-value=19 Score=32.31 Aligned_cols=56 Identities=13% Similarity=0.046 Sum_probs=40.0
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCChHHHHhh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 101 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~S 101 (382)
.+.+++++.|.+|.-+ ++++++|++.+ .+|+..++. .+.||+|.|..-+..+|..+
T Consensus 193 gv~v~~~~~v~~i~~~-----~~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 193 KIEFLTPYVVEEIKGD-----ASGVSSLSIKNTATNEKRELV-----VPGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp TEEEETTEEEEEEEEE-----TTEEEEEEEEETTTCCEEEEE-----CSEEEECSCEEECCGGGBCT
T ss_pred CeEEEeCCEEEEEECC-----CCcEeEEEEEecCCCceEEEe-----cCEEEEEecCccChhhhhcc
Confidence 4667888889888654 35778888875 257655665 48999999977665565544
No 59
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=47.48 E-value=9 Score=37.53 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=33.0
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 93 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~ 93 (382)
.+.++.++.| +|..+ +++++||.+.+.+| +++ ++.||+|+|+..
T Consensus 133 gv~i~~~~~v-~l~~~-----~~~v~Gv~v~~~~g---~~~-----a~~VVlAtGg~~ 176 (472)
T 2e5v_A 133 GIPIIEDRLV-EIRVK-----DGKVTGFVTEKRGL---VED-----VDKLVLATGGYS 176 (472)
T ss_dssp TCCEECCCEE-EEEEE-----TTEEEEEEETTTEE---ECC-----CSEEEECCCCCG
T ss_pred CCEEEECcEE-EEEEe-----CCEEEEEEEEeCCC---eEE-----eeeEEECCCCCc
Confidence 4668899999 99876 57899998854223 243 589999999764
No 60
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=46.24 E-value=16 Score=36.96 Aligned_cols=45 Identities=11% Similarity=0.084 Sum_probs=34.7
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 91 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGa 91 (382)
.+.++.++.|+.|..+ ++..++|.+.+ +|...+++ ++.||.|.|+
T Consensus 142 Gv~i~~g~~V~~v~~~-----~g~~~~V~~~~-~G~~~~i~-----AdlVV~AdG~ 186 (591)
T 3i3l_A 142 GITVHEETPVTDVDLS-----DPDRVVLTVRR-GGESVTVE-----SDFVIDAGGS 186 (591)
T ss_dssp TCEEETTCCEEEEECC-----STTCEEEEEEE-TTEEEEEE-----ESEEEECCGG
T ss_pred CCEEEeCCEEEEEEEc-----CCCEEEEEEec-CCceEEEE-----cCEEEECCCC
Confidence 4567889999999875 35677888865 67656776 4899999997
No 61
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=45.91 E-value=19 Score=35.40 Aligned_cols=44 Identities=14% Similarity=0.081 Sum_probs=32.7
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 92 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai 92 (382)
.+.++.++.|++|.+++ +++++||+.. +|+ +++ ++.||+++|-+
T Consensus 270 Gg~i~l~t~V~~I~~d~----~g~v~gV~~~--~G~--~i~-----Ad~VI~a~~~~ 313 (475)
T 3p1w_A 270 GGTFMLNKNVVDFVFDD----DNKVCGIKSS--DGE--IAY-----CDKVICDPSYV 313 (475)
T ss_dssp --CEESSCCEEEEEECT----TSCEEEEEET--TSC--EEE-----EEEEEECGGGC
T ss_pred CCEEEeCCeEEEEEEec----CCeEEEEEEC--CCc--EEE-----CCEEEECCCcc
Confidence 45578999999999842 5789999873 565 355 38899999866
No 62
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=45.51 E-value=11 Score=35.81 Aligned_cols=47 Identities=11% Similarity=-0.072 Sum_probs=34.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 99 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl 99 (382)
.+++++++.|++|..+ ++++ | . .+|. ++. ++.||+|+|+-.+++||-
T Consensus 203 G~~i~~~~~V~~i~~~-----~~~v--V--~-~~g~--~~~-----ad~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 203 KGKILTRKEVVEINIE-----EKKV--Y--T-RDNE--EYS-----FDVAISNVGVRETVKLIG 249 (421)
T ss_dssp TCEEESSCCEEEEETT-----TTEE--E--E-TTCC--EEE-----CSEEEECSCHHHHHHHHC
T ss_pred CCEEEcCCeEEEEEEE-----CCEE--E--E-eCCc--EEE-----eCEEEECCCHHHHHHhcC
Confidence 3678999999999875 4554 3 3 3564 355 489999999888887663
No 63
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=44.22 E-value=27 Score=35.05 Aligned_cols=45 Identities=11% Similarity=0.095 Sum_probs=34.5
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~T 94 (382)
.+.+++++.|++|..+ ++++++|++. +|+ ++. ++.||+|.|+-..
T Consensus 234 Gv~I~~~t~V~~I~~~-----~~~v~gV~l~--~G~--~i~-----Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 234 GGEIRFSTRVDDLHME-----DGQITGVTLS--NGE--EIK-----SRHVVLAVGHSAR 278 (549)
T ss_dssp TCEEESSCCEEEEEES-----SSBEEEEEET--TSC--EEE-----CSCEEECCCTTCH
T ss_pred CCEEEeCCEEEEEEEe-----CCEEEEEEEC--CCC--EEE-----CCEEEECCCCChh
Confidence 4678899999999876 5678888873 465 355 4899999998543
No 64
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=42.92 E-value=28 Score=33.41 Aligned_cols=42 Identities=14% Similarity=-0.011 Sum_probs=32.3
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 92 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai 92 (382)
...+++++.|++|..+ ++++++|.. +|. +++ ++.||+|+|..
T Consensus 248 G~~i~~~~~V~~I~~~-----~~~v~~v~~---~g~--~~~-----ad~VV~a~~~~ 289 (433)
T 1d5t_A 248 GGTYMLNKPVDDIIME-----NGKVVGVKS---EGE--VAR-----CKQLICDPSYV 289 (433)
T ss_dssp TCCCBCSCCCCEEEEE-----TTEEEEEEE---TTE--EEE-----CSEEEECGGGC
T ss_pred CCEEECCCEEEEEEEe-----CCEEEEEEE---CCe--EEE-----CCEEEECCCCC
Confidence 3567899999999876 578888873 464 455 48999999876
No 65
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=41.84 E-value=34 Score=32.67 Aligned_cols=53 Identities=8% Similarity=0.050 Sum_probs=35.8
Q ss_pred cccCCCCeEeeeCCeEEe-ecccCCCC-----CCCCh-H-HHHHHHHHHHHHHHHHhhhhc
Q 016822 326 KVVDHDYKVLGVDALRVI-DGSTFYYS-----PGTNP-Q-ATVMMLGRYMGVRILSERLAS 378 (382)
Q Consensus 326 sVVD~~~rV~gv~NL~Vv-DaSvfP~~-----~~~Np-~-~Ti~alA~r~A~~i~~~~~~~ 378 (382)
=+||+++|+-+.+|+|++ |++.+|.. +.+.| + .....-|.-+|+.|++...++
T Consensus 275 i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~ 335 (430)
T 3hyw_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 478999999999999987 67777753 22233 2 234455777777777655543
No 66
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=41.45 E-value=23 Score=32.08 Aligned_cols=52 Identities=13% Similarity=0.190 Sum_probs=37.6
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEe-CCCceEEEEeecCCCceEEEeCCCcCChHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 98 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~~~~v~~~~~a~~eVILaaGai~TP~LL 98 (382)
.+.+++++.|++|.-+ +++++|++.+ .+|+..++. .+.||+|.|..-+..+|
T Consensus 202 gv~i~~~~~v~~i~~~------~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 202 KMKFIWDTAVEEIQGA------DSVSGVKLRNLKTGEVSELA-----TDGVFIFIGHVPNTAFV 254 (325)
T ss_dssp TEEEECSEEEEEEEES------SSEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CceEecCCceEEEccC------CcEEEEEEEECCCCcEEEEE-----cCEEEEccCCCCChHHH
Confidence 4667888889888642 4678899975 257656665 48999999976655554
No 67
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=41.41 E-value=28 Score=32.13 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=33.0
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 101 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~S 101 (382)
.+.++.++.|++|..+ ++++ +|.. .+| +++ ++.||+|+|+. ++.|+-..
T Consensus 178 g~~i~~~~~v~~i~~~-----~~~~-~v~~--~~g---~~~-----a~~vV~A~G~~-s~~l~~~~ 226 (382)
T 1ryi_A 178 GAEIFEHTPVLHVERD-----GEAL-FIKT--PSG---DVW-----ANHVVVASGVW-SGMFFKQL 226 (382)
T ss_dssp TCEEETTCCCCEEECS-----SSSE-EEEE--TTE---EEE-----EEEEEECCGGG-THHHHHHT
T ss_pred CCEEEcCCcEEEEEEE-----CCEE-EEEc--CCc---eEE-----cCEEEECCChh-HHHHHHhc
Confidence 4567889999999865 3344 5543 344 455 48999999986 66666543
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=40.92 E-value=25 Score=31.83 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=38.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLL 98 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~LL 98 (382)
.+.+++++.|.+|.-+. +++++++|++.+. +|+..++. .+.||+|.|..-+..+|
T Consensus 209 gv~i~~~~~v~~i~~~~---~~~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 209 KIDVIWNSSVVEAYGDG---ERDVLGGLKVKNVVTGDVSDLK-----VSGLFFAIGHEPATKFL 264 (333)
T ss_dssp TEEEECSEEEEEEEESS---SSSSEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CeeEecCCceEEEeCCC---CccceeeEEEEecCCCceEEEe-----cCEEEEEeCCccchHHh
Confidence 45677888888886541 1127888999753 46656665 48999999987666554
No 69
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=40.90 E-value=18 Score=37.03 Aligned_cols=49 Identities=6% Similarity=-0.022 Sum_probs=32.7
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML 100 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~ 100 (382)
.+.+++++.|++|..+ +++ |.+...+|. +++ ++.||+|+|+. +++|+..
T Consensus 431 Gv~i~~~t~V~~l~~~-----~~~---v~V~t~~G~--~i~-----Ad~VVlAtG~~-s~~l~~~ 479 (676)
T 3ps9_A 431 GLQIYYQYQLQNFSRK-----DDC---WLLNFAGDQ--QAT-----HSVVVLANGHQ-ISRFSQT 479 (676)
T ss_dssp TCEEEESCCEEEEEEE-----TTE---EEEEETTSC--EEE-----ESEEEECCGGG-GGCSTTT
T ss_pred CCEEEeCCeeeEEEEe-----CCe---EEEEECCCC--EEE-----CCEEEECCCcc-hhccccc
Confidence 4667899999999887 333 344444554 355 38999999976 5544433
No 70
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=40.41 E-value=25 Score=35.12 Aligned_cols=52 Identities=17% Similarity=0.270 Sum_probs=38.0
Q ss_pred cCCc-ccCCCCeEee-----eCCeEEeec---ccCC-CCCCCChHHHHHHHHHHHHHHHHHh
Q 016822 323 QVGK-VVDHDYKVLG-----VDALRVIDG---STFY-YSPGTNPQATVMMLGRYMGVRILSE 374 (382)
Q Consensus 323 rMGs-VVD~~~rV~g-----v~NL~VvDa---SvfP-~~~~~Np~~Ti~alA~r~A~~i~~~ 374 (382)
.||+ .+|.++||.+ ++|||.+.. +++- .-.++|..+..+..+.++++.+.+.
T Consensus 506 t~GGl~id~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 506 TMGGVMIDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp ECCEEEBCTTCEEECTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCeEECCCceEECCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 3675 4799999854 899999974 4443 2246788888888899988887653
No 71
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=40.24 E-value=16 Score=36.07 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=30.7
Q ss_pred ccCCCCeEeeeCCeEEe-ecccCCCCCCCChHHHHHHHHHHHHHHHHH
Q 016822 327 VVDHDYKVLGVDALRVI-DGSTFYYSPGTNPQATVMMLGRYMGVRILS 373 (382)
Q Consensus 327 VVD~~~rV~gv~NL~Vv-DaSvfP~~~~~Np~~Ti~alA~r~A~~i~~ 373 (382)
+||+++|+.+.+|+|++ |++..|.++.+. ..+.-|..+|+.|.+
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDK 398 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHH
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHH
Confidence 68999999999999987 777777554332 234445556665543
No 72
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=37.52 E-value=25 Score=31.60 Aligned_cols=56 Identities=18% Similarity=0.142 Sum_probs=39.9
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|.+|.-+ ++ ..+|.+.+. +|...++. .+.||+|.|..-++.+|..+|
T Consensus 203 gv~~~~~~~v~~i~~~-----~~-~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~~ 259 (332)
T 3lzw_A 203 KVNVLTPFVPAELIGE-----DK-IEQLVLEEVKGDRKEILE-----IDDLIVNYGFVSSLGPIKNWG 259 (332)
T ss_dssp SCEEETTEEEEEEECS-----SS-CCEEEEEETTSCCEEEEE-----CSEEEECCCEECCCGGGGGSS
T ss_pred CeEEEeCceeeEEecC-----Cc-eEEEEEEecCCCceEEEE-----CCEEEEeeccCCCchHHhhcC
Confidence 4567888899888643 22 677888763 45556665 489999999887777766655
No 73
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=36.17 E-value=37 Score=34.84 Aligned_cols=44 Identities=14% Similarity=0.142 Sum_probs=31.1
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 91 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGa 91 (382)
...+++++.|++|+++. +.++|+||. ..+|+ +++ ++.||..+..
T Consensus 392 Gg~i~l~~~V~~I~~~~---~~g~v~gV~--~~~Ge--~i~-----A~~VVs~~~~ 435 (650)
T 1vg0_A 392 GGIYCLRHSVQCLVVDK---ESRKCKAVI--DQFGQ--RII-----SKHFIIEDSY 435 (650)
T ss_dssp TCEEESSCCEEEEEEET---TTCCEEEEE--ETTSC--EEE-----CSEEEEEGGG
T ss_pred CCEEEeCCEeeEEEEeC---CCCeEEEEE--eCCCC--EEE-----cCEEEEChhh
Confidence 45578999999999972 128999988 34676 355 4777775553
No 74
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=35.67 E-value=35 Score=34.05 Aligned_cols=52 Identities=21% Similarity=0.282 Sum_probs=37.5
Q ss_pred cCCc-ccCCCCeEe-----eeCCeEEeec---ccCC-CCCCCChHHHHHHHHHHHHHHHHHh
Q 016822 323 QVGK-VVDHDYKVL-----GVDALRVIDG---STFY-YSPGTNPQATVMMLGRYMGVRILSE 374 (382)
Q Consensus 323 rMGs-VVD~~~rV~-----gv~NL~VvDa---SvfP-~~~~~Np~~Ti~alA~r~A~~i~~~ 374 (382)
.||+ .||.++||. -++|||.+.. +++- .-+++|..+..+..+.++++++.+.
T Consensus 501 t~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~ 562 (566)
T 1qo8_A 501 TMGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKH 562 (566)
T ss_dssp ECCEECBCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccEEECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 4675 479999985 5899999974 3442 1245777777888889888877654
No 75
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=35.30 E-value=26 Score=32.47 Aligned_cols=47 Identities=23% Similarity=0.233 Sum_probs=30.0
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 99 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl 99 (382)
.+.++.++.|++|..+ ++. |.+...+| +++ ++.||+|+|+- +++|+-
T Consensus 164 Gv~i~~~~~v~~i~~~-----~~~---~~v~~~~g---~~~-----a~~vV~A~G~~-~~~l~~ 210 (389)
T 2gf3_A 164 GAKVLTHTRVEDFDIS-----PDS---VKIETANG---SYT-----ADKLIVSMGAW-NSKLLS 210 (389)
T ss_dssp TCEEECSCCEEEEEEC-----SSC---EEEEETTE---EEE-----EEEEEECCGGG-HHHHGG
T ss_pred CCEEEcCcEEEEEEec-----CCe---EEEEeCCC---EEE-----eCEEEEecCcc-HHHHhh
Confidence 3567789999999765 222 33444333 455 48999999974 555543
No 76
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=35.00 E-value=21 Score=36.76 Aligned_cols=50 Identities=6% Similarity=-0.024 Sum_probs=31.8
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML 100 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~ 100 (382)
.+.+++++.|++|..+ +++ |.+...+|. .+++ ++.||+|+|+- +++|+..
T Consensus 426 Gv~i~~~t~V~~l~~~-----~~~---v~V~t~~G~-~~i~-----Ad~VVlAtG~~-s~~l~~~ 475 (689)
T 3pvc_A 426 GMTCHYQHELQRLKRI-----DSQ---WQLTFGQSQ-AAKH-----HATVILATGHR-LPEWEQT 475 (689)
T ss_dssp TCEEEESCCEEEEEEC-----SSS---EEEEEC-CC-CCEE-----ESEEEECCGGG-TTCSTTT
T ss_pred CCEEEeCCeEeEEEEe-----CCe---EEEEeCCCc-EEEE-----CCEEEECCCcc-hhccccc
Confidence 4567899999999876 222 333333453 1355 38999999986 5555443
No 77
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=34.48 E-value=45 Score=32.08 Aligned_cols=44 Identities=7% Similarity=-0.116 Sum_probs=32.5
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 92 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai 92 (382)
...+++++.|++|..++ ++++++||.. +|. +++ ++.||+|+|..
T Consensus 256 G~~i~~~~~V~~i~~~~---~~~~~~~V~~---~g~--~~~-----ad~VV~a~~~~ 299 (453)
T 2bcg_G 256 GGTYMLDTPIDEVLYKK---DTGKFEGVKT---KLG--TFK-----APLVIADPTYF 299 (453)
T ss_dssp TCEEECSCCCCEEEEET---TTTEEEEEEE---TTE--EEE-----CSCEEECGGGC
T ss_pred CCEEECCCEEEEEEEEC---CCCeEEEEEE---CCe--EEE-----CCEEEECCCcc
Confidence 45688999999998762 1468888875 354 355 48899999976
No 78
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=33.51 E-value=46 Score=33.83 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=39.2
Q ss_pred cCCc-ccCCCCeEee--------eCCeEEeecc----cCC-CCCCCChHHHHHHHHHHHHHHHHHh
Q 016822 323 QVGK-VVDHDYKVLG--------VDALRVIDGS----TFY-YSPGTNPQATVMMLGRYMGVRILSE 374 (382)
Q Consensus 323 rMGs-VVD~~~rV~g--------v~NL~VvDaS----vfP-~~~~~Np~~Ti~alA~r~A~~i~~~ 374 (382)
.||+ .+|.++||.+ ++|||.++-- ++- .-.++|..+-.+..+.++++++.+.
T Consensus 366 tmGGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~ 431 (621)
T 2h88_A 366 NMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAET 431 (621)
T ss_dssp ESCBEEBCTTSEEEEEETTEEEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcEeECCCCeEeecccCCCcccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHh
Confidence 4675 5799999965 9999999763 332 1246888888899999988887654
No 79
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=33.32 E-value=35 Score=34.10 Aligned_cols=52 Identities=19% Similarity=0.242 Sum_probs=37.9
Q ss_pred cCCc-ccCCCCeEe------eeCCeEEeec---ccCC-CCCCCChHHHHHHHHHHHHHHHHHh
Q 016822 323 QVGK-VVDHDYKVL------GVDALRVIDG---STFY-YSPGTNPQATVMMLGRYMGVRILSE 374 (382)
Q Consensus 323 rMGs-VVD~~~rV~------gv~NL~VvDa---SvfP-~~~~~Np~~Ti~alA~r~A~~i~~~ 374 (382)
.||+ .+|.++||. -++|||.+.. +++- .-+++|..+..+..+.++++++.+.
T Consensus 506 t~GGl~id~~~~Vl~~~g~~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~ 568 (572)
T 1d4d_A 506 TMGGLVIDTKAEVKSEKTAKPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKF 568 (572)
T ss_dssp ECCEEEBCTTCEEEBSSSSSEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCeEECCCCeEEcCCCCcccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 3675 479999985 4788999974 4442 1246788888888999998887653
No 80
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=33.06 E-value=47 Score=31.13 Aligned_cols=54 Identities=17% Similarity=0.031 Sum_probs=36.8
Q ss_pred CceeccCCccceEEeecc--------------CCCCCeEEEEEEEe----CCC------ceEEEEeecCCCceEEEeCCC
Q 016822 36 PVASLCSCMPPCIRFCSE--------------LKARPVAHGVVFRD----ATG------AKHRAYLKNGPKNEIIVSAGA 91 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~--------------~~~~~rAtGV~~~~----~~G------~~~~v~~~~~a~~eVILaaGa 91 (382)
.+.++.++.|+.|+.++. .++..+++||.+.. .+| ...+++ ++.||+|.|.
T Consensus 175 gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~-----Ak~VV~ATG~ 249 (344)
T 3jsk_A 175 NVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN-----APVIISTTGH 249 (344)
T ss_dssp TEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE-----CSEEEECCCS
T ss_pred CCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE-----cCEEEECCCC
Confidence 467889999999988741 00123999998853 233 335676 5899999996
Q ss_pred cCC
Q 016822 92 LGS 94 (382)
Q Consensus 92 i~T 94 (382)
-..
T Consensus 250 ~s~ 252 (344)
T 3jsk_A 250 DGP 252 (344)
T ss_dssp SSS
T ss_pred Cch
Confidence 654
No 81
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=30.32 E-value=60 Score=27.84 Aligned_cols=44 Identities=11% Similarity=0.139 Sum_probs=30.3
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCCh
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 95 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP 95 (382)
+.++ ++.|++|..+ ++++++|.. .+|. +++ ++.||+|+|.....
T Consensus 84 v~i~-~~~v~~i~~~-----~~~v~~v~~--~~g~--~i~-----a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 84 LHLF-QATATGLLLE-----GNRVVGVRT--WEGP--PAR-----GEKVVLAVGSFLGA 127 (232)
T ss_dssp EEEE-ECCEEEEEEE-----TTEEEEEEE--TTSC--CEE-----CSEEEECCTTCSSC
T ss_pred cEEE-EeEEEEEEEe-----CCEEEEEEE--CCCC--EEE-----CCEEEECCCCChhh
Confidence 4556 4688888876 457777765 3564 355 48999999985443
No 82
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=29.17 E-value=63 Score=32.01 Aligned_cols=50 Identities=12% Similarity=0.072 Sum_probs=33.4
Q ss_pred eccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChHHHH
Q 016822 39 SLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 99 (382)
Q Consensus 39 v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~LLl 99 (382)
++.++.|+.|..+ +..++ |++.+. +|+..+++ ++.||.|.|+-.+-+=++
T Consensus 152 v~~~~~v~~~~~~-----~~~v~-v~~~~~~~G~~~~i~-----a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 152 LRTRSRLDSFEQR-----DDHVR-ATITDLRTGATRAVH-----ARYLVACDGASSPTRKAL 202 (549)
T ss_dssp EECSEEEEEEEEC-----SSCEE-EEEEETTTCCEEEEE-----EEEEEECCCTTCHHHHHH
T ss_pred cccCcEEEEEEEe-----CCEEE-EEEEECCCCCEEEEE-----eCEEEECCCCCcHHHHHc
Confidence 6788899988765 23344 666552 36656676 489999999866544333
No 83
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=28.97 E-value=53 Score=30.49 Aligned_cols=30 Identities=13% Similarity=0.017 Sum_probs=21.2
Q ss_pred CceeccCCccceEEeeccCCCCC--eEEEEEEE
Q 016822 36 PVASLCSCMPPCIRFCSELKARP--VAHGVVFR 66 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~--rAtGV~~~ 66 (382)
.+.++.++.|+.|+.++.. +++ +++||.+.
T Consensus 161 GV~i~~~~~V~~Ll~~~~~-~~g~~rV~GVvv~ 192 (326)
T 2gjc_A 161 NVKLFNATCVEDLVTRPPT-EKGEVTVAGVVTN 192 (326)
T ss_dssp TEEEETTEEEEEEEECCCC------CEEEEEEE
T ss_pred CcEEEecceeeeeeecccc-cCCCcEEEEEEec
Confidence 4678899999999987310 114 99999885
No 84
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=28.77 E-value=43 Score=30.75 Aligned_cols=41 Identities=29% Similarity=0.336 Sum_probs=27.2
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 92 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai 92 (382)
.+.++.++.|++|..+ +++ |.+...+|. ++ ++.||+|+|+.
T Consensus 163 G~~i~~~~~V~~i~~~-----~~~---~~v~~~~g~---~~-----a~~vV~a~G~~ 203 (372)
T 2uzz_A 163 GCAQLFNCPVTAIRHD-----DDG---VTIETADGE---YQ-----AKKAIVCAGTW 203 (372)
T ss_dssp TCEEECSCCEEEEEEC-----SSS---EEEEESSCE---EE-----EEEEEECCGGG
T ss_pred CCEEEcCCEEEEEEEc-----CCE---EEEEECCCe---EE-----cCEEEEcCCcc
Confidence 3557788999999865 222 334444452 55 48999999964
No 85
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=28.75 E-value=60 Score=31.74 Aligned_cols=49 Identities=8% Similarity=-0.020 Sum_probs=32.5
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 96 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~ 96 (382)
++.++.++.|+.|..+ +..++ |++.+.+| .++++ ++.||.|.|+-.+-|
T Consensus 121 gv~v~~~~~v~~i~~~-----~~~v~-v~~~~~~g-~~~~~-----a~~vVgADG~~S~VR 169 (499)
T 2qa2_A 121 GAELLRGHTVRALTDE-----GDHVV-VEVEGPDG-PRSLT-----TRYVVGCDGGRSTVR 169 (499)
T ss_dssp TCEEEESCEEEEEEEC-----SSCEE-EEEECSSC-EEEEE-----EEEEEECCCTTCHHH
T ss_pred CCEEEcCCEEEEEEEe-----CCEEE-EEEEcCCC-cEEEE-----eCEEEEccCcccHHH
Confidence 4667888999988765 22343 66655445 45666 489999999765443
No 86
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=28.02 E-value=43 Score=34.20 Aligned_cols=44 Identities=14% Similarity=0.022 Sum_probs=31.3
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCCh
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 95 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP 95 (382)
+.+ .++.|+.|..+ +++++||... +|. +++ ++.||+|+|+....
T Consensus 139 VeI-~~~~Vt~L~~e-----~g~V~GV~t~--dG~--~i~-----AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 139 LYI-KQEEVVDIIVK-----NNQVVGVRTN--LGV--EYK-----TKAVVVTTGTFLNG 182 (637)
T ss_dssp EEE-EESCEEEEEES-----SSBEEEEEET--TSC--EEE-----CSEEEECCTTCBTC
T ss_pred CEE-EEeEEEEEEec-----CCEEEEEEEC--CCc--EEE-----eCEEEEccCCCccC
Confidence 445 35688888776 5678898773 564 455 48999999986443
No 87
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=26.18 E-value=58 Score=29.28 Aligned_cols=56 Identities=13% Similarity=-0.021 Sum_probs=38.2
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|.+|.-+ +++.+|.+.+. +|+..++. ...||+|.|.--+..+|..+|
T Consensus 205 gv~v~~~~~v~~i~~~------~~~~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~~ 261 (335)
T 2zbw_A 205 RLEVLTPYELRRVEGD------ERVRWAVVFHNQTQEELALE-----VDAVLILAGYITKLGPLANWG 261 (335)
T ss_dssp SSEEETTEEEEEEEES------SSEEEEEEEETTTCCEEEEE-----CSEEEECCCEEEECGGGGGSC
T ss_pred CeEEecCCcceeEccC------CCeeEEEEEECCCCceEEEe-----cCEEEEeecCCCCchHhhhcc
Confidence 4567888888888642 45778888643 56555665 489999999765545554443
No 88
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=26.02 E-value=39 Score=32.06 Aligned_cols=46 Identities=13% Similarity=-0.070 Sum_probs=29.4
Q ss_pred cccC-CCCeEeeeCCeEEeecccCCCCCCCChHHH-HHHHHHHHHHHH
Q 016822 326 KVVD-HDYKVLGVDALRVIDGSTFYYSPGTNPQAT-VMMLGRYMGVRI 371 (382)
Q Consensus 326 sVVD-~~~rV~gv~NL~VvDaSvfP~~~~~Np~~T-i~alA~r~A~~i 371 (382)
.-|| ..++..-++|||.+.-=+=-..+.+.-+++ ..+-+..++..+
T Consensus 351 ~~~~~~tmes~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~ 398 (401)
T 2gqf_A 351 KVISSKTMESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSI 398 (401)
T ss_dssp GGBCTTTCBBSSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHH
T ss_pred ccCChhhccccCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHH
Confidence 4588 779999999999976655555455555555 344444444433
No 89
>2kgy_A RV0603 protein, possible exported protein; secretory protein, immune system; NMR {Mycobacterium tuberculosis}
Probab=25.83 E-value=44 Score=25.30 Aligned_cols=35 Identities=14% Similarity=0.106 Sum_probs=27.2
Q ss_pred cCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEe
Q 016822 41 CSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYL 77 (382)
Q Consensus 41 t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~ 77 (382)
.+..|+.|++|++ ++..+..|+++..+|.++.+++
T Consensus 51 pGGTVtsVElDdd--dg~~~yEVEV~~~DG~e~dV~V 85 (102)
T 2kgy_A 51 PGGTAGEVETETG--EGAAAYGVLVTRPDGTRVEVHL 85 (102)
T ss_dssp TTTSBCCEEEECC--SSSCEEEECCBBTTTBEEEEEE
T ss_pred CCceEEEEEEecC--CCceEEEEEEEcCCCCEEEEEE
Confidence 4589999999964 2346899999987898877764
No 90
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=25.46 E-value=68 Score=30.58 Aligned_cols=48 Identities=17% Similarity=0.148 Sum_probs=35.0
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~T 94 (382)
.+.+++++.|++|.-+ ++ ...|.+.+. +|+..++. ...||+|.|..-+
T Consensus 330 ~v~i~~~~~v~~v~~~-----~~-~~~v~~~~~~~g~~~~~~-----~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 330 RHAFRCMTTVERATAT-----AQ-GIELALRDAGSGELSVET-----YDAVILATGYERQ 378 (463)
T ss_dssp CSEEETTEEEEEEEEE-----TT-EEEEEEEETTTCCEEEEE-----ESEEEECCCEECC
T ss_pred CeEEEeCCEEEEEEec-----CC-EEEEEEEEcCCCCeEEEE-----CCEEEEeeCCCCC
Confidence 5778999999999765 22 245666654 57766665 4899999997766
No 91
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=25.42 E-value=88 Score=30.55 Aligned_cols=50 Identities=14% Similarity=-0.003 Sum_probs=33.6
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 97 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~L 97 (382)
.+.++.++.|+.|..+ +..++ |++.+.+| .++++ ++.||.|.|+-..-|=
T Consensus 120 gv~v~~~~~v~~i~~~-----~~~v~-v~~~~~~g-~~~~~-----a~~vVgADG~~S~VR~ 169 (500)
T 2qa1_A 120 GADIRRGHEVLSLTDD-----GAGVT-VEVRGPEG-KHTLR-----AAYLVGCDGGRSSVRK 169 (500)
T ss_dssp TCEEEETCEEEEEEEE-----TTEEE-EEEEETTE-EEEEE-----ESEEEECCCTTCHHHH
T ss_pred CCEEECCcEEEEEEEc-----CCeEE-EEEEcCCC-CEEEE-----eCEEEECCCcchHHHH
Confidence 4667889999999776 23344 66665444 45666 4899999998654433
No 92
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=25.02 E-value=38 Score=30.57 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=31.8
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 98 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LL 98 (382)
.+.+++++.|++|..++ + +|.+...+|+. ..+ ++.||+|.|+-...++|
T Consensus 119 g~~i~~~~~v~~i~~~~----~----~~~v~~~~g~~-~~~-----a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGE----E----HWNLLDAEGQN-HGP-----FSHVIIATPAPQASTLL 167 (336)
T ss_dssp TCCEECSCCEEEEEECS----S----CEEEEETTSCE-EEE-----ESEEEECSCHHHHGGGG
T ss_pred cCcEEecCEEEEEEEeC----C----EEEEEeCCCcC-ccc-----cCEEEEcCCHHHHHHhh
Confidence 35678999999998652 2 24554556753 333 38999999965555443
No 93
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=24.92 E-value=81 Score=30.89 Aligned_cols=48 Identities=13% Similarity=0.050 Sum_probs=31.8
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEE--EEeCCCceEEEEeecCCCceEEEeCCCcC
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVV--FRDATGAKHRAYLKNGPKNEIIVSAGALG 93 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~--~~~~~G~~~~v~~~~~a~~eVILaaGai~ 93 (382)
.+.++.++.|+.|..++ ++++++|. +.+.+| ..+++ ++.||.|.|+-.
T Consensus 134 gv~i~~~~~v~~i~~~~----~~~~~~v~v~~~~~~~-~~~i~-----a~~vV~AdG~~S 183 (535)
T 3ihg_A 134 GGAIRFGTRLLSFRQHD----DDAGAGVTARLAGPDG-EYDLR-----AGYLVGADGNRS 183 (535)
T ss_dssp TCEEESSCEEEEEEEEC----GGGCSEEEEEEEETTE-EEEEE-----EEEEEECCCTTC
T ss_pred CCEEEeCCEEEEEEECC----CCccccEEEEEEcCCC-eEEEE-----eCEEEECCCCcc
Confidence 46688999999998762 33333444 444333 45666 489999999764
No 94
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=24.67 E-value=99 Score=29.65 Aligned_cols=42 Identities=10% Similarity=0.052 Sum_probs=28.1
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCC
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAG 90 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaG 90 (382)
..|++++.|++|..+ +++++ |.+.+ +|...+++ ++.||+++.
T Consensus 252 ~~i~~~~~V~~i~~~-----~~~v~-v~~~~-g~~~~~~~-----ad~vI~a~p 293 (489)
T 2jae_A 252 DNIVFGAEVTSMKNV-----SEGVT-VEYTA-GGSKKSIT-----ADYAICTIP 293 (489)
T ss_dssp GGEETTCEEEEEEEE-----TTEEE-EEEEE-TTEEEEEE-----ESEEEECSC
T ss_pred CeEEECCEEEEEEEc-----CCeEE-EEEec-CCeEEEEE-----CCEEEECCC
Confidence 568899999999876 34443 54443 23334555 489999986
No 95
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=24.03 E-value=80 Score=30.03 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=38.3
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|++|.-++ +++++++|++. +|+ ++. .+.||+|.|..-+..||..+|
T Consensus 205 GV~i~~~~~v~~i~~~~---~~~~v~~v~~~--~G~--~i~-----~D~Vv~a~G~~p~~~l~~~~g 259 (431)
T 1q1r_A 205 GVDIRTGTQVCGFEMST---DQQKVTAVLCE--DGT--RLP-----ADLVIAGIGLIPNCELASAAG 259 (431)
T ss_dssp TCEEECSCCEEEEEECT---TTCCEEEEEET--TSC--EEE-----CSEEEECCCEEECCHHHHHTT
T ss_pred CeEEEeCCEEEEEEecc---CCCcEEEEEeC--CCC--EEE-----cCEEEECCCCCcCcchhhccC
Confidence 45678899999887410 13567777763 564 354 489999999876667777766
No 96
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=23.29 E-value=1.3e+02 Score=24.17 Aligned_cols=48 Identities=13% Similarity=0.075 Sum_probs=31.5
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.++.+ .|++|..++ ++ +.+...+| ++. ++.||+|.|.- |.++...|
T Consensus 70 gv~v~~~-~v~~i~~~~----~~----~~v~~~~g---~i~-----ad~vI~A~G~~--~~~~~~~g 117 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMG----GV----FEVETEEG---VEK-----AERLLLCTHKD--PTLPSLLG 117 (180)
T ss_dssp TCEEEEC-CCCEEEECS----SS----EEEECSSC---EEE-----EEEEEECCTTC--CHHHHHHT
T ss_pred CCEEEeC-EEEEEEEcC----CE----EEEEECCC---EEE-----ECEEEECCCCC--CCccccCC
Confidence 4667888 999987642 22 33443455 455 48999999976 56666655
No 97
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=23.13 E-value=17 Score=35.40 Aligned_cols=52 Identities=4% Similarity=-0.074 Sum_probs=32.0
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCce-EEEEeecCCCceEEEeCCCcC
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAK-HRAYLKNGPKNEIIVSAGALG 93 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~-~~v~~~~~a~~eVILaaGai~ 93 (382)
..|++++.|++|..++.....+..+.|.+.+.+|.. .++. ++.||+++..-.
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~-----ad~VI~a~p~~~ 308 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEES-----FDAVIMTAPLCD 308 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCE-----ESEEEECSCHHH
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEE-----CCEEEECCCHHH
Confidence 578999999999887310000113667776445632 2344 388999988433
No 98
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=22.96 E-value=19 Score=35.49 Aligned_cols=53 Identities=9% Similarity=-0.027 Sum_probs=35.3
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChH
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQ 96 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~ 96 (382)
.+.++.++.|+.|..++. ++...+|.+.+. +|...+++ ++.||+|.|+-..++
T Consensus 180 gv~v~~~~~v~~i~~~~~---~~~~~~v~~~~~~~g~~~~i~-----ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 180 GVEIHWGVKFTGLQPPPR---KGSGWRAQLQPNPPAQLASYE-----FDVLISAAGGKFVPE 233 (497)
T ss_dssp TCEEEESCEEEEEECCCS---TTCCBEEEEESCCCHHHHTCC-----BSEEEECCCTTCCCT
T ss_pred CCEEEeCCEEEEEEEecC---CCCEEEEEEEECCCCCEEEEE-----cCEEEECCCCCcccc
Confidence 466788999998876421 233456776543 55333454 589999999987775
No 99
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=22.90 E-value=89 Score=30.01 Aligned_cols=52 Identities=15% Similarity=0.003 Sum_probs=36.6
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 102 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG 102 (382)
.+.+++++.|++|.-+ +++++ |.+. +|+ ++. .+.||+|.|..-+..||..+|
T Consensus 216 GV~i~~~~~v~~i~~~-----~~~v~-v~~~--~g~--~i~-----aD~Vv~a~G~~p~~~l~~~~g 267 (472)
T 3iwa_A 216 DVVVHTGEKVVRLEGE-----NGKVA-RVIT--DKR--TLD-----ADLVILAAGVSPNTQLARDAG 267 (472)
T ss_dssp TCEEECSCCEEEEEES-----SSBEE-EEEE--SSC--EEE-----CSEEEECSCEEECCHHHHHHT
T ss_pred CCEEEeCCEEEEEEcc-----CCeEE-EEEe--CCC--EEE-----cCEEEECCCCCcCHHHHHhCC
Confidence 4667899999999753 34554 5553 565 454 489999999887666776666
No 100
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=22.78 E-value=1.1e+02 Score=28.94 Aligned_cols=47 Identities=15% Similarity=0.034 Sum_probs=30.9
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEE--eCCCceEEEEeecCCCceEEEeCCC
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFR--DATGAKHRAYLKNGPKNEIIVSAGA 91 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~--~~~G~~~~v~~~~~a~~eVILaaGa 91 (382)
..+..++.|++|..++. +++..++.+. +.+|+.+++. .+.||+|.|+
T Consensus 142 ~~i~~~~~V~~i~~~~~---~~~~~~~~V~~~~g~g~~~~~~-----~d~lVlAtG~ 190 (463)
T 3s5w_A 142 EQSRYGEEVLRIEPMLS---AGQVEALRVISRNADGEELVRT-----TRALVVSPGG 190 (463)
T ss_dssp TTEEESEEEEEEEEEEE---TTEEEEEEEEEEETTSCEEEEE-----ESEEEECCCC
T ss_pred CeEEeCCEEEEEEEecC---CCceEEEEEEEecCCCceEEEE-----eCEEEECCCC
Confidence 45678888999887632 3455545554 3335555666 3899999997
No 101
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=22.61 E-value=53 Score=31.47 Aligned_cols=45 Identities=11% Similarity=0.014 Sum_probs=31.2
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHH
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 97 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~L 97 (382)
..|.+++.|++|..+ ++ +|.+...+| ++. ++.||+|+++-...+|
T Consensus 249 ~~i~~~~~V~~i~~~-----~~---~~~v~~~~g---~~~-----ad~vV~a~p~~~~~~l 293 (475)
T 3lov_A 249 SEIRLETPLLAISRE-----DG---RYRLKTDHG---PEY-----ADYVLLTIPHPQVVQL 293 (475)
T ss_dssp CEEESSCCCCEEEEE-----TT---EEEEECTTC---CEE-----ESEEEECSCHHHHHHH
T ss_pred CEEEcCCeeeEEEEe-----CC---EEEEEECCC---eEE-----CCEEEECCCHHHHHHH
Confidence 478999999999876 23 355555567 354 3899999986544444
No 102
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=22.33 E-value=72 Score=31.01 Aligned_cols=50 Identities=10% Similarity=0.022 Sum_probs=34.0
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHH
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 97 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~L 97 (382)
+.+++++.|++|.-+ +++++ |++.+.+|+..++. ...||+|.|..-+..+
T Consensus 229 V~i~~~~~v~~i~~~-----~~~v~-v~~~~~~G~~~~i~-----~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 229 FYFDAKARVISTIEK-----EDAVE-VIYFDKSGQKTTES-----FQYVLAATGRKANVDK 278 (492)
T ss_dssp SEEETTCEEEEEEEC-----SSSEE-EEEECTTCCEEEEE-----ESEEEECSCCEESCSS
T ss_pred cEEEECCEEEEEEEc-----CCEEE-EEEEeCCCceEEEE-----CCEEEEeeCCccCCCC
Confidence 567888899888754 23333 55544467655665 4899999998766665
No 103
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=22.24 E-value=24 Score=34.76 Aligned_cols=19 Identities=11% Similarity=0.043 Sum_probs=17.3
Q ss_pred CceEEEeCCCcCChHHHHh
Q 016822 82 KNEIIVSAGALGSPQLLML 100 (382)
Q Consensus 82 ~~eVILaaGai~TP~LLl~ 100 (382)
.+.||||+|+|+|.+||+.
T Consensus 399 ~~~~vVC~~GigtS~lL~~ 417 (485)
T 3sqn_A 399 MTAYFLFQGEPAWKAFLQQ 417 (485)
T ss_dssp EEEEEECCSCHHHHHHHHH
T ss_pred ceEEEECCCchhHHHHHHH
Confidence 4789999999999999986
No 104
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=22.14 E-value=83 Score=30.25 Aligned_cols=40 Identities=8% Similarity=0.105 Sum_probs=27.6
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCC
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 91 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGa 91 (382)
+.+++++.|++|..+ ++. |.+...+|+ +++ ++.||+|+|.
T Consensus 271 ~~i~~~~~V~~i~~~-----~~~---v~v~~~~g~--~~~-----ad~vI~a~~~ 310 (495)
T 2vvm_A 271 LGYVFGCPVRSVVNE-----RDA---ARVTARDGR--EFV-----AKRVVCTIPL 310 (495)
T ss_dssp EEEESSCCEEEEEEC-----SSS---EEEEETTCC--EEE-----EEEEEECCCG
T ss_pred eEEEeCCEEEEEEEc-----CCE---EEEEECCCC--EEE-----cCEEEECCCH
Confidence 558899999999865 222 444444565 344 3899999995
No 105
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=21.41 E-value=80 Score=29.20 Aligned_cols=49 Identities=14% Similarity=0.073 Sum_probs=32.4
Q ss_pred CceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCCh
Q 016822 36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 95 (382)
Q Consensus 36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP 95 (382)
.+.++.++.|++|..++ ++ ...|++.+ +|...+++ ++.||.|.|.-...
T Consensus 117 g~~i~~~~~v~~i~~~~----~~-~~~v~~~~-~g~~~~~~-----a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 117 GATTVYQAAEVRLHDLQ----GE-RPYVTFER-DGERLRLD-----CDYIAGCDGFHGIS 165 (394)
T ss_dssp TCEEESSCEEEEEECTT----SS-SCEEEEEE-TTEEEEEE-----CSEEEECCCTTCST
T ss_pred CCeEEeceeEEEEEEec----CC-ceEEEEec-CCcEEEEE-----eCEEEECCCCCcHH
Confidence 45678899998886541 12 23466643 67655676 58999999976554
No 106
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=21.29 E-value=68 Score=32.84 Aligned_cols=43 Identities=9% Similarity=0.091 Sum_probs=30.2
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCC
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 94 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~T 94 (382)
+.+ .++.|+.|..+ +++++||... +|. +++ ++.||+|+|+...
T Consensus 140 V~I-~~~~V~~L~~e-----~g~V~GV~t~--dG~--~I~-----Ad~VVLATGt~s~ 182 (651)
T 3ces_A 140 LMI-FQQAVEDLIVE-----NDRVVGAVTQ--MGL--KFR-----AKAVVLTVGTFLD 182 (651)
T ss_dssp EEE-EECCEEEEEES-----SSBEEEEEET--TSE--EEE-----EEEEEECCSTTTC
T ss_pred CEE-EEEEEEEEEec-----CCEEEEEEEC--CCC--EEE-----CCEEEEcCCCCcc
Confidence 445 35688888765 5678888763 463 455 4899999998644
No 107
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=20.83 E-value=1.4e+02 Score=28.15 Aligned_cols=53 Identities=9% Similarity=-0.039 Sum_probs=34.1
Q ss_pred cccCCCCeEeeeCCeEEe-ecccCCCC-----CCCCh--HHHHHHHHHHHHHHHHHhhhhc
Q 016822 326 KVVDHDYKVLGVDALRVI-DGSTFYYS-----PGTNP--QATVMMLGRYMGVRILSERLAS 378 (382)
Q Consensus 326 sVVD~~~rV~gv~NL~Vv-DaSvfP~~-----~~~Np--~~Ti~alA~r~A~~i~~~~~~~ 378 (382)
=.||+++|..+.+|+|++ |+.-+|.. +...| ....+.-|..+|+.|.+...++
T Consensus 286 i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 286 VLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp BCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred EEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 368999999999999987 45555531 11233 3334455677787777665544
No 108
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=20.81 E-value=71 Score=30.85 Aligned_cols=52 Identities=12% Similarity=0.123 Sum_probs=33.3
Q ss_pred eccCCccceEEeeccCCCCCeEEEEEEEeC-CCceEEEEeecCCCceEEEeCCCcCChHHHH
Q 016822 39 SLCSCMPPCIRFCSELKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 99 (382)
Q Consensus 39 v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~-~G~~~~v~~~~~a~~eVILaaGai~TP~LLl 99 (382)
++.++.|++|..++ ++.-..|++.+. +|...++. .+.||+|.|....|+++-
T Consensus 120 i~~~~~V~~v~~~~----~~~~~~V~~~~~~~g~~~~~~-----~d~VVvAtG~~s~p~~p~ 172 (464)
T 2xve_A 120 IRFNTAVRHVEFNE----DSQTFTVTVQDHTTDTIYSEE-----FDYVVCCTGHFSTPYVPE 172 (464)
T ss_dssp EECSEEEEEEEEET----TTTEEEEEEEETTTTEEEEEE-----ESEEEECCCSSSSBCCCC
T ss_pred EEeCCEEEEEEEcC----CCCcEEEEEEEcCCCceEEEE-----cCEEEECCCCCCCCccCC
Confidence 56788888887662 211234666542 35445555 489999999888886543
No 109
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=20.35 E-value=81 Score=31.62 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=37.5
Q ss_pred cCCc-ccCCCCeEe---------eeCCeEEeec----ccCC-CCCCCChHHHHHHHHHHHHHHHHHh
Q 016822 323 QVGK-VVDHDYKVL---------GVDALRVIDG----STFY-YSPGTNPQATVMMLGRYMGVRILSE 374 (382)
Q Consensus 323 rMGs-VVD~~~rV~---------gv~NL~VvDa----SvfP-~~~~~Np~~Ti~alA~r~A~~i~~~ 374 (382)
.||+ .+|.++||. -++|||.+.- +++- .-.++|..+-.+..+.++++++.+.
T Consensus 356 t~GGi~vd~~~~vl~~~~~~~g~~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~ 422 (588)
T 2wdq_A 356 MMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQES 422 (588)
T ss_dssp ECCBEEBCTTCEEEEECTTSCEEEEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHH
T ss_pred cCceEEECCCCCCcccccccCCCeeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 4665 579999995 5899999976 3332 2245788888888888888777653
No 110
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=20.32 E-value=1.2e+02 Score=28.50 Aligned_cols=52 Identities=8% Similarity=0.075 Sum_probs=33.6
Q ss_pred ccCCCCeEeeeCCeEEee-cccCCCC-----CCCCh--HHHHHHHHHHHHHHHHHhhhhc
Q 016822 327 VVDHDYKVLGVDALRVID-GSTFYYS-----PGTNP--QATVMMLGRYMGVRILSERLAS 378 (382)
Q Consensus 327 VVD~~~rV~gv~NL~VvD-aSvfP~~-----~~~Np--~~Ti~alA~r~A~~i~~~~~~~ 378 (382)
.||+++|.-+.+|+|++. +.-+|.. +...| ....+.-|..+|+.|.+...++
T Consensus 276 ~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 276 IVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp CCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 689999998999999984 4555431 11122 3344555777787777665543
No 111
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=20.31 E-value=1.1e+02 Score=29.10 Aligned_cols=49 Identities=10% Similarity=0.059 Sum_probs=31.1
Q ss_pred eccCCccceEEeeccCCCCCeEEEEEEEe-CCCc-eEEEEeecCCCceEEEeCCCcCChHHH
Q 016822 39 SLCSCMPPCIRFCSELKARPVAHGVVFRD-ATGA-KHRAYLKNGPKNEIIVSAGALGSPQLL 98 (382)
Q Consensus 39 v~t~a~V~rI~~~~~~~~~~rAtGV~~~~-~~G~-~~~v~~~~~a~~eVILaaGai~TP~LL 98 (382)
++.++.|++|..+ ++. .-|++.+ .+|. ..++. .+.||+|.|+...|++.
T Consensus 132 i~~~t~V~~v~~~-----~~~-~~V~~~~~~~G~~~~~~~-----~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 132 IKLATDVLDIEKK-----DGS-WVVTYKGTKAGSPISKDI-----FDAVSICNGHYEVPYIP 182 (447)
T ss_dssp EECSEEEEEEEEE-----TTE-EEEEEEESSTTCCEEEEE-----ESEEEECCCSSSSBCBC
T ss_pred EEeCCEEEEEEeC-----CCe-EEEEEeecCCCCeeEEEE-----eCEEEECCCCCCCCCCC
Confidence 5668888888654 222 3355544 1255 34555 38999999998877654
No 112
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=20.09 E-value=54 Score=29.54 Aligned_cols=49 Identities=14% Similarity=0.026 Sum_probs=31.3
Q ss_pred cccCCC-CeEeeeCCeEEee--cccCCCCCCCChHHHHHHHHHHHHHHHHHhhhh
Q 016822 326 KVVDHD-YKVLGVDALRVID--GSTFYYSPGTNPQATVMMLGRYMGVRILSERLA 377 (382)
Q Consensus 326 sVVD~~-~rV~gv~NL~VvD--aSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~~~ 377 (382)
=+||++ ++.-+++|+|+++ --.-|.. ......+.-|..+|+.|.+...+
T Consensus 302 i~vd~~~l~~t~~~~vya~Gd~d~~~~~~---~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 302 VEVDGSGLRALAVPSVWLLGYGDWNGMAS---ATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BCBCTTSCBBSSCTTEEECSSCGGGSTTC---SSTTTHHHHHHHHHHHHHHHTC-
T ss_pred ccccCCcccCCCCCCeEEeccccccccch---hhhhhhHHHHHHHHHHHHHHHHh
Confidence 467888 6778999999997 3332211 12233567788888877765544
No 113
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=20.05 E-value=69 Score=30.31 Aligned_cols=46 Identities=9% Similarity=0.051 Sum_probs=30.4
Q ss_pred ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHH
Q 016822 37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 97 (382)
Q Consensus 37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~L 97 (382)
..|.+++.|++|..+ ++. |.+...+|+. +. ++.||+|+.+-...+|
T Consensus 248 ~~i~~~~~V~~i~~~-----~~~---~~v~~~~g~~--~~-----ad~vi~a~p~~~~~~l 293 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHS-----GSC---YSLELDNGVT--LD-----ADSVIVTAPHKAAAGM 293 (470)
T ss_dssp EEEECSCCEEEEEEC-----SSS---EEEEESSSCE--EE-----ESEEEECSCHHHHHHH
T ss_pred CEEEeCCceEEEEEc-----CCe---EEEEECCCCE--EE-----CCEEEECCCHHHHHHH
Confidence 478899999999876 222 4444456753 44 3899999885444443
Done!