Query 016823
Match_columns 382
No_of_seqs 291 out of 1727
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 03:08:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016823.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016823hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00341 Ring-infected erythro 100.0 1.1E-57 2.4E-62 486.8 28.2 301 1-309 569-909 (1136)
2 PF14308 DnaJ-X: X-domain of D 100.0 5.2E-48 1.1E-52 359.3 22.0 194 112-305 2-195 (204)
3 KOG0691 Molecular chaperone (D 100.0 1.4E-38 3E-43 309.0 20.6 271 1-293 1-291 (296)
4 PTZ00475 RESA-like protein; Pr 100.0 7.8E-37 1.7E-41 291.2 21.7 234 59-294 2-279 (282)
5 COG0484 DnaJ DnaJ-class molecu 99.7 4.7E-18 1E-22 169.7 7.4 73 2-74 1-102 (371)
6 KOG0713 Molecular chaperone (D 99.6 6.6E-16 1.4E-20 151.2 5.3 55 3-57 14-88 (336)
7 KOG0712 Molecular chaperone (D 99.6 1.8E-15 3.9E-20 149.4 5.9 71 2-72 1-88 (337)
8 PTZ00037 DnaJ_C chaperone prot 99.5 9.6E-15 2.1E-19 149.6 6.4 71 3-73 26-113 (421)
9 PRK14296 chaperone protein Dna 99.5 1.8E-14 3.9E-19 145.6 6.6 54 3-56 2-74 (372)
10 PRK14288 chaperone protein Dna 99.5 2.5E-14 5.5E-19 144.4 7.0 53 4-56 2-74 (369)
11 PRK14286 chaperone protein Dna 99.5 3.6E-14 7.9E-19 143.4 7.1 53 3-55 2-74 (372)
12 PRK14287 chaperone protein Dna 99.5 5.9E-14 1.3E-18 141.8 7.4 71 3-73 2-98 (371)
13 PRK14276 chaperone protein Dna 99.5 5.6E-14 1.2E-18 142.3 7.2 54 3-56 2-74 (380)
14 PRK14298 chaperone protein Dna 99.5 5.8E-14 1.3E-18 142.1 6.8 56 1-56 1-75 (377)
15 PRK14282 chaperone protein Dna 99.4 8.3E-14 1.8E-18 140.6 6.3 53 3-55 2-75 (369)
16 PRK14277 chaperone protein Dna 99.4 1.5E-13 3.3E-18 139.5 7.3 56 1-56 1-76 (386)
17 KOG0718 Molecular chaperone (D 99.4 2.3E-13 5E-18 137.6 8.1 84 4-120 8-114 (546)
18 PRK14280 chaperone protein Dna 99.4 2.2E-13 4.7E-18 137.9 7.3 54 3-56 2-74 (376)
19 PRK14299 chaperone protein Dna 99.4 2.7E-13 5.9E-18 132.8 7.8 51 4-54 3-72 (291)
20 PRK14297 chaperone protein Dna 99.4 1.8E-13 3.8E-18 138.7 6.4 53 3-55 2-74 (380)
21 PRK14283 chaperone protein Dna 99.4 1.5E-13 3.2E-18 139.2 5.6 56 1-56 1-75 (378)
22 PRK14294 chaperone protein Dna 99.4 3.3E-13 7.2E-18 136.1 7.0 54 3-56 2-75 (366)
23 PRK14285 chaperone protein Dna 99.4 3.2E-13 7E-18 136.2 6.8 52 4-55 2-73 (365)
24 PRK14278 chaperone protein Dna 99.4 4.8E-13 1E-17 135.6 7.2 49 5-53 3-70 (378)
25 PRK14279 chaperone protein Dna 99.4 4.5E-13 9.7E-18 136.4 6.1 49 4-52 8-76 (392)
26 PHA03102 Small T antigen; Revi 99.4 5E-13 1.1E-17 119.3 5.3 81 5-86 5-103 (153)
27 PRK14284 chaperone protein Dna 99.4 5.8E-13 1.3E-17 135.5 6.4 51 5-55 1-71 (391)
28 PRK14291 chaperone protein Dna 99.4 8.3E-13 1.8E-17 134.0 6.7 52 4-55 2-72 (382)
29 PRK10767 chaperone protein Dna 99.3 1.1E-12 2.3E-17 132.6 7.0 54 3-56 2-75 (371)
30 PRK14292 chaperone protein Dna 99.3 1.2E-12 2.6E-17 132.2 6.8 69 5-73 2-97 (371)
31 PRK14295 chaperone protein Dna 99.3 1E-12 2.2E-17 133.6 6.2 55 2-56 6-84 (389)
32 PRK14290 chaperone protein Dna 99.3 1.3E-12 2.8E-17 131.8 6.8 69 5-73 3-102 (365)
33 PRK14301 chaperone protein Dna 99.3 1.2E-12 2.6E-17 132.4 6.5 53 4-56 3-75 (373)
34 TIGR02349 DnaJ_bact chaperone 99.3 2.1E-12 4.6E-17 129.6 6.5 51 6-56 1-70 (354)
35 PRK14289 chaperone protein Dna 99.3 3.6E-12 7.9E-17 129.4 7.2 56 1-56 1-76 (386)
36 PRK14281 chaperone protein Dna 99.3 3.3E-12 7.2E-17 130.2 6.8 52 4-55 2-73 (397)
37 PRK14300 chaperone protein Dna 99.3 4.8E-12 1E-16 128.0 6.1 52 5-56 3-73 (372)
38 PRK14293 chaperone protein Dna 99.3 8.8E-12 1.9E-16 126.2 7.2 53 4-56 2-73 (374)
39 KOG0715 Molecular chaperone (D 99.2 6.7E-12 1.5E-16 122.9 6.0 68 5-73 43-129 (288)
40 PRK10266 curved DNA-binding pr 99.2 1.8E-11 4E-16 120.7 7.5 51 3-53 2-71 (306)
41 KOG0716 Molecular chaperone (D 99.2 9.7E-12 2.1E-16 118.8 3.3 52 4-55 30-101 (279)
42 KOG0717 Molecular chaperone (D 99.1 7E-11 1.5E-15 119.8 4.9 51 3-53 6-77 (508)
43 KOG0719 Molecular chaperone (D 99.1 8.9E-11 1.9E-15 110.1 5.1 68 4-71 13-103 (264)
44 PF00226 DnaJ: DnaJ domain; I 99.1 1.2E-10 2.7E-15 88.3 3.9 43 6-48 1-64 (64)
45 TIGR03835 termin_org_DnaJ term 99.0 5.6E-10 1.2E-14 119.6 7.2 68 5-72 2-89 (871)
46 COG2214 CbpA DnaJ-class molecu 98.8 3.5E-09 7.6E-14 95.9 4.6 51 1-51 2-73 (237)
47 KOG0721 Molecular chaperone (D 98.8 5.2E-09 1.1E-13 97.5 5.6 54 4-57 98-171 (230)
48 KOG0624 dsRNA-activated protei 98.7 5.7E-09 1.2E-13 103.4 2.6 51 3-54 392-465 (504)
49 smart00271 DnaJ DnaJ molecular 98.7 1.7E-08 3.7E-13 75.2 3.7 38 5-42 1-59 (60)
50 KOG0550 Molecular chaperone (D 98.6 1.4E-08 3E-13 102.5 3.0 69 2-70 370-461 (486)
51 cd06257 DnaJ DnaJ domain or J- 98.6 6.5E-08 1.4E-12 70.7 4.0 35 6-40 1-55 (55)
52 PRK00294 hscB co-chaperone Hsc 98.6 1.2E-06 2.5E-11 80.1 13.0 48 2-49 1-75 (173)
53 PRK03578 hscB co-chaperone Hsc 98.5 8.4E-07 1.8E-11 81.3 11.5 51 3-53 4-83 (176)
54 PRK01356 hscB co-chaperone Hsc 98.5 1.3E-07 2.8E-12 85.8 5.2 46 5-50 2-72 (166)
55 KOG0714 Molecular chaperone (D 98.5 8.1E-08 1.7E-12 91.3 3.8 68 5-72 3-105 (306)
56 PRK05014 hscB co-chaperone Hsc 98.5 1.4E-07 3E-12 86.0 5.0 45 5-49 1-72 (171)
57 KOG0720 Molecular chaperone (D 98.2 9.7E-07 2.1E-11 90.1 5.0 47 4-50 234-299 (490)
58 PHA02624 large T antigen; Prov 98.1 3E-06 6.5E-11 90.2 5.4 68 5-72 11-98 (647)
59 COG5407 SEC63 Preprotein trans 98.0 6.1E-06 1.3E-10 84.2 5.6 52 5-56 98-174 (610)
60 PTZ00100 DnaJ chaperone protei 98.0 3.8E-06 8.2E-11 71.9 2.8 36 4-39 64-115 (116)
61 PRK01773 hscB co-chaperone Hsc 97.9 0.00012 2.6E-09 67.0 11.9 45 5-49 2-73 (173)
62 KOG0722 Molecular chaperone (D 97.8 1E-05 2.2E-10 77.4 1.8 47 5-51 33-98 (329)
63 COG5269 ZUO1 Ribosome-associat 97.1 0.00056 1.2E-08 66.2 4.8 64 5-68 43-132 (379)
64 TIGR00714 hscB Fe-S protein as 96.5 0.0037 7.9E-08 56.3 4.6 35 17-51 3-62 (157)
65 PRK09430 djlA Dna-J like membr 95.6 0.006 1.3E-07 59.5 2.1 25 5-29 200-224 (267)
66 KOG1150 Predicted molecular ch 95.3 0.023 5E-07 53.1 4.6 43 4-46 52-115 (250)
67 KOG0723 Molecular chaperone (D 94.2 0.054 1.2E-06 45.7 3.6 32 9-40 60-107 (112)
68 KOG0568 Molecular chaperone (D 88.4 0.26 5.7E-06 47.1 1.8 36 5-40 47-102 (342)
69 KOG0917 Uncharacterized conser 82.3 41 0.0009 33.2 13.5 93 245-352 109-204 (338)
70 KOG1789 Endocytosis protein RM 76.9 1.9 4.2E-05 49.3 3.0 39 1-39 1277-1336(2235)
71 PF13446 RPT: A repeated domai 74.3 3.4 7.3E-05 31.0 2.9 24 6-29 6-29 (62)
72 PF03656 Pam16: Pam16; InterP 69.6 4.2 9.2E-05 35.5 2.8 33 8-40 61-109 (127)
73 KOG3192 Mitochondrial J-type c 54.5 17 0.00038 32.9 3.9 38 30-67 60-99 (168)
74 PF03207 OspD: Borrelia outer 51.2 1.4E+02 0.003 27.6 9.2 30 243-272 187-222 (254)
75 KOG0543 FKBP-type peptidyl-pro 44.7 1.9E+02 0.0042 30.1 10.2 68 229-296 245-318 (397)
76 COG1076 DjlA DnaJ-domain-conta 37.1 20 0.00042 32.6 1.6 25 5-29 113-137 (174)
77 COG1698 Uncharacterized protei 34.2 86 0.0019 25.9 4.6 34 255-288 10-46 (93)
78 PF11833 DUF3353: Protein of u 33.6 50 0.0011 30.8 3.7 26 14-39 1-38 (194)
79 PF04719 TAFII28: hTAFII28-lik 29.0 2.3E+02 0.0051 23.2 6.5 38 258-295 27-65 (90)
80 PF12316 Dsh_C: Segment polari 27.7 17 0.00037 34.1 -0.5 18 313-330 6-23 (203)
81 PF08405 Calici_PP_N: Viral po 21.1 4.8E+02 0.01 26.5 8.1 30 184-213 232-262 (358)
No 1
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=100.00 E-value=1.1e-57 Score=486.80 Aligned_cols=301 Identities=19% Similarity=0.343 Sum_probs=254.0
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCCCcc
Q 016823 1 MVKETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTEAII 61 (382)
Q Consensus 1 m~~~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~~~~ 61 (382)
|+++++||+||||+++||..+||+|||++ .|++||+|||||.+|+.||.+|..++..++++
T Consensus 569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~~~i 648 (1136)
T PTZ00341 569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNFI 648 (1136)
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCCCcc
Confidence 57899999999999999999999999997 89999999999999999999999999888999
Q ss_pred ChHHHHhhhhCCchhhhhhhhhhhhhhhhccc----cccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChh
Q 016823 62 DPAAIFAMLFGSELFEDYIGQLAMASVASLDI----FTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKE 137 (382)
Q Consensus 62 d~~~~f~~~Fg~~~f~~~iG~~~~~~~~~~~~----~~~~~~~~~~~~~e~~~~~qk~Re~~La~~L~~rL~~yv~g~~~ 137 (382)
||..|| ++||++.|.+|||.+.++++..... ...+.....+.+++.|++.|++|+.+||..|++||++||+|+.
T Consensus 649 DP~~Ff-mlFgse~F~dYiG~l~iatl~k~~fe~~~s~~d~~~~~e~l~e~m~~~QkeRE~kLA~~LkdRL~~YVdgd~- 726 (1136)
T PTZ00341 649 HPSIFY-LLASLEKFADFTGSPQIVTLLKFFFEKKLSMNDLDNKSEHLLKFMEQYQKEREAHISENLINILQPCIAGDR- 726 (1136)
T ss_pred CHHHHH-HHhhhHHHHHhcCCHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH-
Confidence 999777 7899999999999999987654211 1111111235678889999999999999999999999999886
Q ss_pred hHHHHHHHHHHHhhcccchhhhhhhhHHHHHHHHHHhhhhcccccCcchhHHHhhccchhHHHHHHHHHHHH-HHHHHHH
Q 016823 138 DFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAI-ALIQLQE 216 (382)
Q Consensus 138 ~f~~~~~~E~~~L~~~sfG~~il~~IG~vY~~~A~~~Lg~~~~~lG~~~~~~~~r~kg~~~K~~~~~~~~A~-~~~~~~~ 216 (382)
.|...++.||+.|+.+|||..|||+|||+|.++|..|||+.++ |+++++++++.++.+++++++.+.+++ .++..++
T Consensus 727 ~w~~~~e~Ei~~L~~sSFG~~IL~tIGwiY~n~A~~fL~~~k~--g~~kl~~r~k~n~~~v~~~~n~lss~lkda~~t~e 804 (1136)
T PTZ00341 727 KWDVPIIDKIEELKGSPFDIAIIDSIGWIFKHVAKSHLKKPKK--AAKKLEQRSKANKEELANENNKLMNILKEYFGNNE 804 (1136)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhccch--hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHH
Confidence 5999999999999999999999999999999999999998765 677888888999988888887777766 5555555
Q ss_pred HHHHhhhhc----------------CCCCHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCHHHHHH
Q 016823 217 DMKKQLSAE----------------GNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRA 280 (382)
Q Consensus 217 ~~~k~~~~~----------------~~~~eee~~~~~~~~~~~iL~alW~~~~~DIE~TLr~VC~kVL~D~~V~~e~R~k 280 (382)
.+.+..... ..++.+ .+...++++|.++|+++++|||+|||.||++||.|++||+++|++
T Consensus 805 q~nki~~n~En~t~~~~nen~~k~i~~l~~e----ee~~ilgkiL~~iw~isl~DIE~TVR~VCekVL~Dk~Vd~ktRik 880 (1136)
T PTZ00341 805 QINSITYNFENINLNEDNENGSKKILDLNHK----DQKEIFEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEKKLKK 880 (1136)
T ss_pred HHHHhhhhhcccccccccccccccccccCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHH
Confidence 554332100 011222 145567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCcccccc
Q 016823 281 RAKALKTLGKIFQRAKSNNGSEGETVLSG 309 (382)
Q Consensus 281 RAeAL~~LG~if~~~~~~~~e~~~~~~~~ 309 (382)
||+||++||.+|+++......+..++-.+
T Consensus 881 RAeaLkiLG~iMqk~a~~~K~~KK~kK~D 909 (1136)
T PTZ00341 881 RAESLKKLANAIEKYAGGGKKDKKAKKKD 909 (1136)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccc
Confidence 99999999999999998877766555443
No 2
>PF14308 DnaJ-X: X-domain of DnaJ-containing
Probab=100.00 E-value=5.2e-48 Score=359.30 Aligned_cols=194 Identities=39% Similarity=0.613 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHHhhccccccCChhhHHHHHHHHHHHhhcccchhhhhhhhHHHHHHHHHHhhhhcccccCcchhHHHh
Q 016823 112 VQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWF 191 (382)
Q Consensus 112 ~qk~Re~~La~~L~~rL~~yv~g~~~~f~~~~~~E~~~L~~~sfG~~il~~IG~vY~~~A~~~Lg~~~~~lG~~~~~~~~ 191 (382)
.|++|+.+||.+|++||++||+|+.+.|...|+.||++|+.+|||.+|||+|||||.++|.+|||+..+|+|++++++++
T Consensus 2 ~q~~R~~~La~~L~~rL~~yv~~~~~~f~~~~~~Ea~~L~~~sFg~~iL~~IG~vY~~~A~~~l~~~~~~lG~~~~~~~~ 81 (204)
T PF14308_consen 2 EQKEREVELAEKLRDRLQPYVDGDKEEFKEKMEEEAEDLKEESFGVEILHSIGWVYENKAKQFLGKKKTFLGIGGFFARM 81 (204)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcccccChHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Q 016823 192 RNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDN 271 (382)
Q Consensus 192 r~kg~~~K~~~~~~~~A~~~~~~~~~~~k~~~~~~~~~eee~~~~~~~~~~~iL~alW~~~~~DIE~TLr~VC~kVL~D~ 271 (382)
++++|.++++|+++++|+.++++++++.+.....++.++++++++++..++++|+++|+++++|||+|||+||++||+|+
T Consensus 82 k~k~~~~k~~~~~~~sa~~~~~~~~~~~~~~~~~~~~~~e~~~~~e~~~~~~~L~~~w~~~~~DIe~Tlr~Vc~~VL~D~ 161 (204)
T PF14308_consen 82 KEKGRSVKNQFSTAKSALDAQSTMEELQKAEEKNGEENEEERAELEEEILGKMLDAIWKINKFDIESTLREVCDKVLYDK 161 (204)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999988876656788999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCcc
Q 016823 272 NAKKEELRARAKALKTLGKIFQRAKSNNGSEGET 305 (382)
Q Consensus 272 ~V~~e~R~kRAeAL~~LG~if~~~~~~~~e~~~~ 305 (382)
+||.++|++||+||++||+||+++++.+.+.+++
T Consensus 162 ~V~~~~r~~RA~aL~~LG~if~~~~~~~~~~~~~ 195 (204)
T PF14308_consen 162 GVDKETRLKRAEALKILGKIFQKVKRDKKEKEEA 195 (204)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCccccchH
Confidence 9999999999999999999999999998777665
No 3
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-38 Score=309.02 Aligned_cols=271 Identities=40% Similarity=0.552 Sum_probs=234.2
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCCCc
Q 016823 1 MVKETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTEAI 60 (382)
Q Consensus 1 m~~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~~~ 60 (382)
|++++|||++|||+++||..||+||||++ .+++||+||+|+..|..||++|..+......
T Consensus 1 M~~~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~~~ 80 (296)
T KOG0691|consen 1 MVKDTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQGR 80 (296)
T ss_pred CcccchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccchhh
Confidence 88999999999999999999999999986 9999999999999999999999998766678
Q ss_pred cChHHHHhhhhCCchhhhhhhhhhhhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHH
Q 016823 61 IDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFI 140 (382)
Q Consensus 61 ~d~~~~f~~~Fg~~~f~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~qk~Re~~La~~L~~rL~~yv~g~~~~f~ 140 (382)
.|+.++|...||++.|+.|+|.++...... +...+. ..++++....|++|+..|++.|+++|.+|+++. + +
T Consensus 81 ~d~~~~~r~~f~~dl~~~~~~~~a~~~~~~-e~~~e~-----~~~~~k~~~~~~er~~~l~~~~~~~l~~~~~~~-~--~ 151 (296)
T KOG0691|consen 81 EDQADGFRKKFGSDLFERERGALALLKESE-ESELER-----ERLQEKFRAVQRERVDKLVEILREKLSEVVESV-E--E 151 (296)
T ss_pred hhHHHHHHHHhhhhhhhhHHHHHhHHhhhh-hhhhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-h--h
Confidence 899999999999999999999999876541 111101 144557788899999999999999999999977 3 8
Q ss_pred HHHHHHHHHhhcccchhhhhhhhHHHHHHHHHHhhhhcccccCcchhHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 016823 141 NYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKK 220 (382)
Q Consensus 141 ~~~~~E~~~L~~~sfG~~il~~IG~vY~~~A~~~Lg~~~~~lG~~~~~~~~r~kg~~~K~~~~~~~~A~~~~~~~~~~~k 220 (382)
+++..|+..|..++||.+++|++|.+|.+.....++...+++|+++++.|.+.+|+.++.+|.++.+++.++..|.++.+
T Consensus 152 ~~~~~e~~~l~~e~~~~e~~~~~g~~y~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~e~~~ 231 (296)
T KOG0691|consen 152 RKLATEALQLQRERFGEELLHTIGRTYSRTKALKPIKFRTSPGVSKLSEGSRAKGGALRAMWNLAAGAVALYGGQDEMEK 231 (296)
T ss_pred hhhhHHHHHHHHhhhhHHHHHhhcccchhhHhhhccccccccCcchhhhcccccchhHHHHHhhhHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999997555555566668999999999999999999999999999999998888887
Q ss_pred hhhhcCCCCHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 016823 221 QLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQ 293 (382)
Q Consensus 221 ~~~~~~~~~eee~~~~~~~~~~~iL~alW~~~~~DIE~TLr~VC~kVL~D~~V~~e~R~kRAeAL~~LG~if~ 293 (382)
.....+...++. .++....++++++++|+++++||++||+.||++| +|++|+. .|+.+|+
T Consensus 232 ~~~~~~~~~e~~-~~~~~~~~~~~~~~~~~~s~~dies~l~~~~~~~-~d~~v~~-----------~i~~~~~ 291 (296)
T KOG0691|consen 232 LLEALGEALEKR-AEYASAKTGKSLDTLWHGSSFDIESTLIRVCQKI-KDPSVPL-----------LIFQRFK 291 (296)
T ss_pred hhcchHHHhhhc-hHHHHHhhcchhhhhhHhHHHHHHHHHHHHHHHh-cChHHHH-----------HHHHHHH
Confidence 654433323322 5667777899999999999999999999999999 9999997 7777777
No 4
>PTZ00475 RESA-like protein; Provisional
Probab=100.00 E-value=7.8e-37 Score=291.18 Aligned_cols=234 Identities=24% Similarity=0.361 Sum_probs=170.6
Q ss_pred CccChHHHHhhhhCCchhhhhhhhhhhhhhhhc----cccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccC
Q 016823 59 AIIDPAAIFAMLFGSELFEDYIGQLAMASVASL----DIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQG 134 (382)
Q Consensus 59 ~~~d~~~~f~~~Fg~~~f~~~iG~~~~~~~~~~----~~~~~~~~~~~~~~~e~~~~~qk~Re~~La~~L~~rL~~yv~g 134 (382)
+.+||..+|.++||++.|.+|||++.++++++. ..+.++.....+++.+.|+++|++||++||..|++||+|||+|
T Consensus 2 ~iIDP~~fF~mlFgSe~l~~YIG~L~ma~~v~l~fe~~~~~edi~~~~~~i~~~M~~~QkeRE~kLAl~LrdrLq~YVdg 81 (282)
T PTZ00475 2 IIIVPFIFFNLIFTSDMMYEYIENTKVPIFVKLFFGKSIFIEDIFYYVGMIMKEMMEGQNIREEEVAELLKDRLDLYIDN 81 (282)
T ss_pred ccccHHHHHHHHHhHHHHHHHHhHHHHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999988753 2333334455678899999999999999999999999999986
Q ss_pred ChhhHHHHHHHHHHHhhcccchhhhhhhhHHHHHHHHHHhhhhcccccCcchhHHH--------hhccc---hhHHHHHH
Q 016823 135 NKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEW--------FRNKG---HFIKSQVT 203 (382)
Q Consensus 135 ~~~~f~~~~~~E~~~L~~~sfG~~il~~IG~vY~~~A~~~Lg~~~~~lG~~~~~~~--------~r~kg---~~~K~~~~ 203 (382)
.+.|..+++.||++|+.++||..||++|||+|.++|..|||..+.. |++.-... .|++- ...+...+
T Consensus 82 -~~ew~~~~e~Eak~L~~ssFg~~iLesIGwiY~Nva~~ylge~~~~-~l~~k~~~~~~~~~r~~rn~~~l~~~~~~~~~ 159 (282)
T PTZ00475 82 -EDEWEKLMENEISMLLKSSFSNFILESIGWTYENVSNIFLEEKANS-GINKKDIYLKEANERMIRNSIVLRQCKSRFIS 159 (282)
T ss_pred -hHHHHHHHHHHHHHHHhCcccHHHHHHhHHHHHHHHHHHHHHhhhh-hhhhHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999987654 65432211 22211 00000111
Q ss_pred HHHHHHHHHH-H--HHHHHHhhhh-----cC---CC--------------CHHHHH----HHHHHhHHHHHHHHHHHhHH
Q 016823 204 AATGAIALIQ-L--QEDMKKQLSA-----EG---NY--------------TEEELE----EYMQSHKKLMIDSLWKLNVA 254 (382)
Q Consensus 204 ~~~~A~~~~~-~--~~~~~k~~~~-----~~---~~--------------~eee~~----~~~~~~~~~iL~alW~~~~~ 254 (382)
.+++-+.... . .-..++..+. ++ +. -.+.+. +......+.+|..+.+++++
T Consensus 160 ~~~~~~~~~~~~n~~~~~~~~~~ss~~~~~d~~nn~~~~~~~~~~~~~n~~~~ni~~l~~~ek~kil~~il~~i~~i~l~ 239 (282)
T PTZ00475 160 IITNYYPFKEQNNPFIKQAQYVSSSNYVLDDIINNIDYSIDNIHRAIDNLYYEHILNLLEEEKNEILEEILRNILKIILC 239 (282)
T ss_pred HHHhhccchhhhhhHHHHhhhcccccccccccccchhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1222221110 0 0000110000 00 00 001111 11122357899999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Q 016823 255 DIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQR 294 (382)
Q Consensus 255 DIE~TLr~VC~kVL~D~~V~~e~R~kRAeAL~~LG~if~~ 294 (382)
|||.|||.||++||+|++||.++|.+||++|.+||.++.+
T Consensus 240 DIE~Tvk~~a~~vl~d~~vd~~~~~kRa~~l~~LG~~~l~ 279 (282)
T PTZ00475 240 DVETTVRRSAQKVLQNAEGDTNLMLKRAKGLQSLGKMILQ 279 (282)
T ss_pred HHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999876
No 5
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=4.7e-18 Score=169.66 Aligned_cols=73 Identities=47% Similarity=0.776 Sum_probs=61.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCCC--
Q 016823 2 VKETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTEA-- 59 (382)
Q Consensus 2 ~~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~~-- 59 (382)
|..+|||+||||+++||.+||||||||+ +|++||+|||||++|+.||++|..+....+
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g 80 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG 80 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence 4578999999999999999999999997 999999999999999999999998764211
Q ss_pred ------cc-ChHHHHhhhhCCc
Q 016823 60 ------II-DPAAIFAMLFGSE 74 (382)
Q Consensus 60 ------~~-d~~~~f~~~Fg~~ 74 (382)
+. |..++|..+||+.
T Consensus 81 g~g~~~fgg~~~DIF~~~FgGg 102 (371)
T COG0484 81 GFGFGGFGGDFGDIFEDFFGGG 102 (371)
T ss_pred CCCcCCCCCCHHHHHHHhhcCC
Confidence 11 4677777777543
No 6
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=6.6e-16 Score=151.22 Aligned_cols=55 Identities=45% Similarity=0.840 Sum_probs=52.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGIST 57 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~ 57 (382)
..+|||++|||+++|+..|||+||||+ +|+.||+|||||++|+.||.+|..++..
T Consensus 14 ~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~ 88 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKD 88 (336)
T ss_pred cCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcc
Confidence 468999999999999999999999997 9999999999999999999999988764
No 7
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=1.8e-15 Score=149.39 Aligned_cols=71 Identities=49% Similarity=0.766 Sum_probs=59.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHh-----------------HHHHHHHHcCChhHHHHHHhhCCCCCCCCCccChH
Q 016823 2 VKETEYYDVLGVSPTASEAEIKKAYYIK-----------------VLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPA 64 (382)
Q Consensus 2 ~~~~dyY~iLgV~~~As~~eIKkAYrk~-----------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~~~~d~~ 64 (382)
+.++.||+||||+++||++|||||||++ +|++||+|||||++|+.||++|+++++.++.....
T Consensus 1 ~~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~g~ 80 (337)
T KOG0712|consen 1 VKNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGGGF 80 (337)
T ss_pred CcccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCCCC
Confidence 4689999999999999999999999997 89999999999999999999999987654322111
Q ss_pred HHHhhhhC
Q 016823 65 AIFAMLFG 72 (382)
Q Consensus 65 ~~f~~~Fg 72 (382)
..|.+||+
T Consensus 81 ~~f~~~F~ 88 (337)
T KOG0712|consen 81 GGFSQFFG 88 (337)
T ss_pred ccHHHhcc
Confidence 11666666
No 8
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.52 E-value=9.6e-15 Score=149.62 Aligned_cols=71 Identities=38% Similarity=0.728 Sum_probs=61.1
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh----------------HHHHHHHHcCChhHHHHHHhhCCCCCCCC-CccChHH
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK----------------VLGEAYQVLSDPAQRQAYDAYGKSGISTE-AIIDPAA 65 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~----------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~-~~~d~~~ 65 (382)
.++|||+||||+++||.+|||||||++ +|++||+|||||++|+.||.+|..++... ...|+.+
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~~~~d~~d 105 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPADASD 105 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCCCCcchhh
Confidence 468999999999999999999999997 89999999999999999999998765422 2346677
Q ss_pred HHhhhhCC
Q 016823 66 IFAMLFGS 73 (382)
Q Consensus 66 ~f~~~Fg~ 73 (382)
+|..|||+
T Consensus 106 ~f~~~Fgg 113 (421)
T PTZ00037 106 LFDLIFGG 113 (421)
T ss_pred hHHHhhcc
Confidence 88888874
No 9
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.8e-14 Score=145.60 Aligned_cols=54 Identities=46% Similarity=0.749 Sum_probs=50.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
+.+|||++|||+++||.+|||+|||++ +|++||+|||||++|+.||++|..++.
T Consensus 2 ~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~ 74 (372)
T PRK14296 2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFD 74 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhc
Confidence 568999999999999999999999997 899999999999999999999987543
No 10
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.50 E-value=2.5e-14 Score=144.38 Aligned_cols=53 Identities=43% Similarity=0.771 Sum_probs=49.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
..|||+||||+++||.+|||+|||++ +|++||+|||||++|+.||++|..++.
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~ 74 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLN 74 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccc
Confidence 58999999999999999999999987 899999999999999999999987654
No 11
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.49 E-value=3.6e-14 Score=143.36 Aligned_cols=53 Identities=53% Similarity=0.909 Sum_probs=49.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGI 55 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~ 55 (382)
.+.|||+||||+++||.+|||+|||++ +|++||+|||||++|+.||++|..++
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~ 74 (372)
T PRK14286 2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGV 74 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhh
Confidence 468999999999999999999999986 99999999999999999999998764
No 12
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.47 E-value=5.9e-14 Score=141.78 Aligned_cols=71 Identities=39% Similarity=0.668 Sum_probs=58.2
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCC-----
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTE----- 58 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~----- 58 (382)
...|||++|||+++||.+|||+|||++ +|++||+|||||++|+.||++|..++...
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (371)
T PRK14287 2 SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGG 81 (371)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCC
Confidence 457999999999999999999999986 99999999999999999999998764321
Q ss_pred --CccChHHHHhhhhCC
Q 016823 59 --AIIDPAAIFAMLFGS 73 (382)
Q Consensus 59 --~~~d~~~~f~~~Fg~ 73 (382)
++.+..++|..|||+
T Consensus 82 ~~~f~~~~d~f~~~fgg 98 (371)
T PRK14287 82 AGDFGGFSDIFDMFFGG 98 (371)
T ss_pred CccccchHHHHHhhhcc
Confidence 112344667777764
No 13
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.47 E-value=5.6e-14 Score=142.35 Aligned_cols=54 Identities=57% Similarity=0.871 Sum_probs=50.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
.+.|||+||||+++||.+|||+|||++ +|++||+||+||++|+.||++|..++.
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~ 74 (380)
T PRK14276 2 NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGAN 74 (380)
T ss_pred CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCcccc
Confidence 468999999999999999999999987 999999999999999999999987643
No 14
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.47 E-value=5.8e-14 Score=142.12 Aligned_cols=56 Identities=46% Similarity=0.797 Sum_probs=51.7
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 1 MVKETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 1 m~~~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
|...+|||+||||+++||.+|||+|||++ +|++||+|||||++|+.||++|..++.
T Consensus 1 ~~~~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~ 75 (377)
T PRK14298 1 MATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID 75 (377)
T ss_pred CCCCCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccc
Confidence 55678999999999999999999999986 899999999999999999999987653
No 15
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.45 E-value=8.3e-14 Score=140.59 Aligned_cols=53 Identities=47% Similarity=0.829 Sum_probs=49.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh---------------------HHHHHHHHcCChhHHHHHHhhCCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK---------------------VLGEAYQVLSDPAQRQAYDAYGKSGI 55 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~---------------------~i~eAY~vLsD~~~R~~YD~~G~~~~ 55 (382)
+.+|||+||||+++||.+|||+|||++ +|++||+|||||++|+.||++|..+.
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~ 75 (369)
T PRK14282 2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGE 75 (369)
T ss_pred CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccc
Confidence 468999999999999999999999986 79999999999999999999998764
No 16
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.43 E-value=1.5e-13 Score=139.49 Aligned_cols=56 Identities=45% Similarity=0.837 Sum_probs=52.3
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 1 MVKETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 1 m~~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
|++..|||+||||+++||.+|||+|||++ +|++||+|||||.+|+.||.+|..++.
T Consensus 1 ~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~ 76 (386)
T PRK14277 1 MAAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFD 76 (386)
T ss_pred CCCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccc
Confidence 77789999999999999999999999986 999999999999999999999987643
No 17
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=2.3e-13 Score=137.62 Aligned_cols=84 Identities=37% Similarity=0.613 Sum_probs=68.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh-----------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCCCc
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK-----------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTEAI 60 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~-----------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~~~ 60 (382)
+.+||.+|+|+++||.+|||+|||++ .|.+||+|||||++|..||.+|++|+...+
T Consensus 8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t~g- 86 (546)
T KOG0718|consen 8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKTEG- 86 (546)
T ss_pred hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccccC-
Confidence 45899999999999999999999996 899999999999999999999999986321
Q ss_pred cChHHHHhhhhCCchhhhhhhhhhhhhhhhccccccccccchHHHHHHHHHHHHHHHHHH
Q 016823 61 IDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKL 120 (382)
Q Consensus 61 ~d~~~~f~~~Fg~~~f~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~qk~Re~~L 120 (382)
++.. | . ..++++++++++.+|++|++..
T Consensus 87 --wEl~----~------------------------r--~~tpeEIreE~Erl~r~~de~~ 114 (546)
T KOG0718|consen 87 --WELG----F------------------------R--GKTPEEIREEYERLQRERDERR 114 (546)
T ss_pred --ceee----c------------------------C--CCCHHHHHHHHHHHHHHHHHHH
Confidence 1100 0 0 1147788999999998888654
No 18
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.42 E-value=2.2e-13 Score=137.89 Aligned_cols=54 Identities=50% Similarity=0.817 Sum_probs=50.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
...|||+||||+++||.+|||+|||++ +|++||+|||||.+|+.||++|..++.
T Consensus 2 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~ 74 (376)
T PRK14280 2 AKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPN 74 (376)
T ss_pred CCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccc
Confidence 347999999999999999999999987 899999999999999999999987643
No 19
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.42 E-value=2.7e-13 Score=132.78 Aligned_cols=51 Identities=49% Similarity=0.833 Sum_probs=48.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSG 54 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~ 54 (382)
..|||+||||+++||.+|||+|||++ +|++||+|||||++|+.||.+|..+
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~ 72 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTA 72 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCcc
Confidence 57999999999999999999999997 7999999999999999999999863
No 20
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.42 E-value=1.8e-13 Score=138.71 Aligned_cols=53 Identities=45% Similarity=0.800 Sum_probs=49.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGI 55 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~ 55 (382)
...|||++|||+++||.+|||+|||++ +|++||+||+||.+|+.||++|..++
T Consensus 2 ~~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~ 74 (380)
T PRK14297 2 ASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADF 74 (380)
T ss_pred CCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccc
Confidence 458999999999999999999999987 79999999999999999999998765
No 21
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.42 E-value=1.5e-13 Score=139.19 Aligned_cols=56 Identities=48% Similarity=0.828 Sum_probs=52.8
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 1 MVKETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 1 m~~~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
||.++|||++|||+++||.+|||+|||++ +|++||+|||||.+|+.||++|..++.
T Consensus 1 ~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~ 75 (378)
T PRK14283 1 MAEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMD 75 (378)
T ss_pred CCCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccc
Confidence 78899999999999999999999999997 799999999999999999999987653
No 22
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.40 E-value=3.3e-13 Score=136.10 Aligned_cols=54 Identities=52% Similarity=0.870 Sum_probs=50.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
...|||+||||+++||.+|||+|||++ +|++||+||+||.+|+.||++|..++.
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~ 75 (366)
T PRK14294 2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLS 75 (366)
T ss_pred CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhcccccc
Confidence 468999999999999999999999987 799999999999999999999987653
No 23
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.40 E-value=3.2e-13 Score=136.19 Aligned_cols=52 Identities=44% Similarity=0.739 Sum_probs=49.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGI 55 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~ 55 (382)
..|||++|||+++||.+|||+|||++ +|++||+||+||++|..||++|..++
T Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~ 73 (365)
T PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAF 73 (365)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchh
Confidence 47999999999999999999999997 89999999999999999999998754
No 24
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.39 E-value=4.8e-13 Score=135.55 Aligned_cols=49 Identities=49% Similarity=0.743 Sum_probs=47.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCC
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKS 53 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~ 53 (382)
+|||+||||+++||.+|||+|||++ +|++||+|||||++|+.||++|..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~ 70 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP 70 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence 7999999999999999999999997 799999999999999999999975
No 25
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.37 E-value=4.5e-13 Score=136.35 Aligned_cols=49 Identities=51% Similarity=0.739 Sum_probs=47.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGK 52 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~ 52 (382)
++|||+||||+++||.+|||+|||++ +|++||+|||||++|+.||++|.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 58999999999999999999999997 89999999999999999999986
No 26
>PHA03102 Small T antigen; Reviewed
Probab=99.37 E-value=5e-13 Score=119.25 Aligned_cols=81 Identities=21% Similarity=0.260 Sum_probs=72.4
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHh----------------HHHHHHHHcCChhHHHHHHhhCCCCCCCCCccChHHH
Q 016823 5 TEYYDVLGVSPTA--SEAEIKKAYYIK----------------VLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAI 66 (382)
Q Consensus 5 ~dyY~iLgV~~~A--s~~eIKkAYrk~----------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~~~~d~~~~ 66 (382)
..+|++|||+++| |..+||+|||++ +|++||++|+|+.+|..||.+|........ ..|.++
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~~~~~~ 83 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEEE-DVPSGY 83 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchhHHHHHHHHHHHHHhhHHHhccccccCCccccccc-ccHHHH
Confidence 3589999999999 999999999987 899999999999999999999998765543 349999
Q ss_pred HhhhhCCchhhhhhhhhhhh
Q 016823 67 FAMLFGSELFEDYIGQLAMA 86 (382)
Q Consensus 67 f~~~Fg~~~f~~~iG~~~~~ 86 (382)
|.++||++.|..|+|..-..
T Consensus 84 f~~~fg~~~~~~~~~~~~~c 103 (153)
T PHA03102 84 VGATFGDRVNALYCKDWDTC 103 (153)
T ss_pred hhhhcCCcchhhHhcchHHH
Confidence 99999999999999986654
No 27
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.37 E-value=5.8e-13 Score=135.49 Aligned_cols=51 Identities=57% Similarity=0.878 Sum_probs=48.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCC
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGI 55 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~ 55 (382)
+|||+||||+++||.+|||+|||++ +|++||+||+||++|+.||++|..++
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~ 71 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP 71 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccccc
Confidence 4899999999999999999999986 89999999999999999999998754
No 28
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.36 E-value=8.3e-13 Score=133.95 Aligned_cols=52 Identities=50% Similarity=0.885 Sum_probs=48.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGI 55 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~ 55 (382)
.+|||++|||+++||.+|||+|||++ +|++||+|||||.+|+.||.+|..++
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~ 72 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAF 72 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhccccc
Confidence 47999999999999999999999986 99999999999999999999998754
No 29
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.35 E-value=1.1e-12 Score=132.61 Aligned_cols=54 Identities=56% Similarity=0.879 Sum_probs=50.1
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
...|||+||||+++||.+|||+|||++ +|++||+||+||.+|+.||.+|..++.
T Consensus 2 ~~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (371)
T PRK10767 2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFE 75 (371)
T ss_pred CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccc
Confidence 468999999999999999999999986 799999999999999999999987653
No 30
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.34 E-value=1.2e-12 Score=132.19 Aligned_cols=69 Identities=46% Similarity=0.713 Sum_probs=57.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCCC-------C
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGIST-------E 58 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~-------~ 58 (382)
.|||++|||+++||.+|||+|||++ +|++||+||+||.+|+.||.+|..+... .
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~ 81 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFG 81 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccC
Confidence 4899999999999999999999986 7999999999999999999999865211 0
Q ss_pred -CccChHHHHhhhhCC
Q 016823 59 -AIIDPAAIFAMLFGS 73 (382)
Q Consensus 59 -~~~d~~~~f~~~Fg~ 73 (382)
+..|+.++|..+||+
T Consensus 82 ~~~~d~~d~f~~~fg~ 97 (371)
T PRK14292 82 GMGFDPMDIFEQLFGG 97 (371)
T ss_pred ccCCChHHHHHHhhCC
Confidence 113566788888875
No 31
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.34 E-value=1e-12 Score=133.65 Aligned_cols=55 Identities=51% Similarity=0.815 Sum_probs=50.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHh----hCCCCCC
Q 016823 2 VKETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDA----YGKSGIS 56 (382)
Q Consensus 2 ~~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~----~G~~~~~ 56 (382)
+...|||+||||+++||.+|||+|||++ +|++||+||+||.+|+.||+ +|..++.
T Consensus 6 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~ 84 (389)
T PRK14295 6 YIEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFR 84 (389)
T ss_pred ccccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccc
Confidence 3357999999999999999999999997 89999999999999999999 8887653
No 32
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.34 E-value=1.3e-12 Score=131.83 Aligned_cols=69 Identities=41% Similarity=0.706 Sum_probs=57.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh---------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCC-----
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK---------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTE----- 58 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~---------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~----- 58 (382)
.|||+||||+++||.+|||+|||++ +|++||+|||||.+|+.||.+|..++...
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~ 82 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN 82 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence 7999999999999999999999997 79999999999999999999998755310
Q ss_pred -----CccChHHHHhhhhCC
Q 016823 59 -----AIIDPAAIFAMLFGS 73 (382)
Q Consensus 59 -----~~~d~~~~f~~~Fg~ 73 (382)
.+.++.++|..|||+
T Consensus 83 ~~~~~~~~~~~d~f~~~fg~ 102 (365)
T PRK14290 83 WDNFTHFSDINDIFNQIFGG 102 (365)
T ss_pred ccccccccchhHHHHHHhcC
Confidence 023556777777775
No 33
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.34 E-value=1.2e-12 Score=132.43 Aligned_cols=53 Identities=51% Similarity=0.841 Sum_probs=49.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
..|||++|||+++||.+|||+|||++ +|++||+||+||.+|+.||++|..++.
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~ 75 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVN 75 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccc
Confidence 58999999999999999999999987 899999999999999999999987654
No 34
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.31 E-value=2.1e-12 Score=129.58 Aligned_cols=51 Identities=55% Similarity=0.946 Sum_probs=47.9
Q ss_pred CcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 6 EYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 6 dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
|||++|||+++||.+|||+|||++ +|++||+||+||.+|+.||.+|..+..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~ 70 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN 70 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhccccccc
Confidence 799999999999999999999986 899999999999999999999987653
No 35
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.29 E-value=3.6e-12 Score=129.41 Aligned_cols=56 Identities=54% Similarity=0.890 Sum_probs=51.7
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 1 MVKETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 1 m~~~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
|+...|||++|||+++||.+|||+|||++ +|++||+||+||.+|+.||.+|..++.
T Consensus 1 ~~~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~ 76 (386)
T PRK14289 1 MAEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVG 76 (386)
T ss_pred CCccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccc
Confidence 66789999999999999999999999986 899999999999999999999987643
No 36
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.29 E-value=3.3e-12 Score=130.20 Aligned_cols=52 Identities=48% Similarity=0.854 Sum_probs=49.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGI 55 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~ 55 (382)
..|||+||||+++|+.+|||+|||++ +|++||+||+||.+|+.||++|..++
T Consensus 2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~ 73 (397)
T PRK14281 2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73 (397)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhh
Confidence 47999999999999999999999987 99999999999999999999998754
No 37
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=4.8e-12 Score=128.00 Aligned_cols=52 Identities=46% Similarity=0.806 Sum_probs=48.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
+|||+||||+++||.+|||+|||++ +|++||+||+|+.+|+.||++|..++.
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 73 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQ 73 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccc
Confidence 7999999999999999999999986 999999999999999999999987643
No 38
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.25 E-value=8.8e-12 Score=126.16 Aligned_cols=53 Identities=45% Similarity=0.865 Sum_probs=49.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
..|||+||||+++||.+|||+|||++ .|++||+||+||.+|+.||.+|..++.
T Consensus 2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~ 73 (374)
T PRK14293 2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVS 73 (374)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccc
Confidence 37999999999999999999999987 899999999999999999999987653
No 39
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.25 E-value=6.7e-12 Score=122.88 Aligned_cols=68 Identities=43% Similarity=0.662 Sum_probs=59.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCCCccChHH
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAA 65 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~~~~d~~~ 65 (382)
.|||+||||+++||..|||+||+++ +|.+||+||+|+++|..||.+|..+. .....+|..
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~-~~~~g~~~~ 121 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH-GEFGGNPFD 121 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc-ccccCCccc
Confidence 3899999999999999999999997 99999999999999999999998761 222337788
Q ss_pred HHhhhhCC
Q 016823 66 IFAMLFGS 73 (382)
Q Consensus 66 ~f~~~Fg~ 73 (382)
.|..+|++
T Consensus 122 ~~~~~~~~ 129 (288)
T KOG0715|consen 122 VFLEFFGG 129 (288)
T ss_pred hHHHhhcc
Confidence 88888877
No 40
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.22 E-value=1.8e-11 Score=120.71 Aligned_cols=51 Identities=37% Similarity=0.602 Sum_probs=47.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKS 53 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~ 53 (382)
...|||++|||+++||.+|||+|||++ +|++||+||+||.+|+.||.+|..
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~ 71 (306)
T PRK10266 2 ELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQH 71 (306)
T ss_pred CcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 347999999999999999999999997 999999999999999999998753
No 41
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=9.7e-12 Score=118.85 Aligned_cols=52 Identities=48% Similarity=0.841 Sum_probs=48.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGI 55 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~ 55 (382)
+.++|+|||++++||.++||||||++ +|+.||+|||||.+|..||++|..++
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 56899999999999999999999987 99999999999999999999988764
No 42
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=7e-11 Score=119.77 Aligned_cols=51 Identities=45% Similarity=0.710 Sum_probs=47.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh---------------------HHHHHHHHcCChhHHHHHHhhCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK---------------------VLGEAYQVLSDPAQRQAYDAYGKS 53 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~---------------------~i~eAY~vLsD~~~R~~YD~~G~~ 53 (382)
..++||++|||.++|++.+||++||++ .|..||+|||||+.|++||.+..+
T Consensus 6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreq 77 (508)
T KOG0717|consen 6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQ 77 (508)
T ss_pred hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHH
Confidence 357999999999999999999999997 899999999999999999998774
No 43
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=8.9e-11 Score=110.12 Aligned_cols=68 Identities=35% Similarity=0.535 Sum_probs=55.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh----------------------HHHHHHHHcCChhHHHHHHhhCCCC-CCCCCc
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK----------------------VLGEAYQVLSDPAQRQAYDAYGKSG-ISTEAI 60 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~----------------------~i~eAY~vLsD~~~R~~YD~~G~~~-~~~~~~ 60 (382)
.+|.|+||||.++||..+||||||++ .|+.||+||||.++|+.||+.|.-. ..+.-.
T Consensus 13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~~~d~~ 92 (264)
T KOG0719|consen 13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDESGDID 92 (264)
T ss_pred ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCccchhh
Confidence 35899999999999999999999997 7899999999999999999999765 222234
Q ss_pred cChHHHHhhhh
Q 016823 61 IDPAAIFAMLF 71 (382)
Q Consensus 61 ~d~~~~f~~~F 71 (382)
.|+.++|..+|
T Consensus 93 ~~~~e~~~~iy 103 (264)
T KOG0719|consen 93 EDWLEFWRAIY 103 (264)
T ss_pred hHHHHHHHHHH
Confidence 45555555554
No 44
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.06 E-value=1.2e-10 Score=88.26 Aligned_cols=43 Identities=51% Similarity=0.890 Sum_probs=41.4
Q ss_pred CcccccCCCCCCCHHHHHHHHHHh---------------------HHHHHHHHcCChhHHHHHH
Q 016823 6 EYYDVLGVSPTASEAEIKKAYYIK---------------------VLGEAYQVLSDPAQRQAYD 48 (382)
Q Consensus 6 dyY~iLgV~~~As~~eIKkAYrk~---------------------~i~eAY~vLsD~~~R~~YD 48 (382)
|||+||||+++++.++||++|+++ .|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 689999999999999999999986 7999999999999999998
No 45
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.00 E-value=5.6e-10 Score=119.55 Aligned_cols=68 Identities=41% Similarity=0.701 Sum_probs=55.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCCC-ccChH
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTEA-IIDPA 64 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~~-~~d~~ 64 (382)
.|||+||||+++|+..+||+|||++ +|++||++|+||.+|..||.+|..+..... +....
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d~e~gf~f~~ 81 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDREDDFDFQA 81 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhH
Confidence 6999999999999999999999986 799999999999999999999988754322 11123
Q ss_pred HHHhhhhC
Q 016823 65 AIFAMLFG 72 (382)
Q Consensus 65 ~~f~~~Fg 72 (382)
++|..||+
T Consensus 82 DIF~sfFe 89 (871)
T TIGR03835 82 DVFNSFFE 89 (871)
T ss_pred HHHHHHhh
Confidence 45555554
No 46
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=98.81 E-value=3.5e-09 Score=95.95 Aligned_cols=51 Identities=51% Similarity=0.841 Sum_probs=47.3
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHh---------------------HHHHHHHHcCChhHHHHHHhhC
Q 016823 1 MVKETEYYDVLGVSPTASEAEIKKAYYIK---------------------VLGEAYQVLSDPAQRQAYDAYG 51 (382)
Q Consensus 1 m~~~~dyY~iLgV~~~As~~eIKkAYrk~---------------------~i~eAY~vLsD~~~R~~YD~~G 51 (382)
|....+||+||||+++|+..|||+|||++ .|++||+||+|+.+|..||..+
T Consensus 2 ~~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 2 MSDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred chhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 45678999999999999999999999997 7999999999999999999973
No 47
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.81 E-value=5.2e-09 Score=97.47 Aligned_cols=54 Identities=39% Similarity=0.669 Sum_probs=49.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCChhHHHHHHhhCCCCCCC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSDPAQRQAYDAYGKSGIST 57 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~ 57 (382)
.-|.|+||||+|+||..|||||||++ .|++||+.|+|+..|+.|..+|....++
T Consensus 98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGpq 171 (230)
T KOG0721|consen 98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGPQ 171 (230)
T ss_pred cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCcc
Confidence 46899999999999999999999997 8999999999999999999999876543
No 48
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=98.71 E-value=5.7e-09 Score=103.39 Aligned_cols=51 Identities=41% Similarity=0.681 Sum_probs=46.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHh-----------------------HHHHHHHHcCChhHHHHHHhhCCCC
Q 016823 3 KETEYYDVLGVSPTASEAEIKKAYYIK-----------------------VLGEAYQVLSDPAQRQAYDAYGKSG 54 (382)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrk~-----------------------~i~eAY~vLsD~~~R~~YD~~G~~~ 54 (382)
..+|||+||||.++|+..||.|||||+ .|..|-+|||||++|+.||. |.+.
T Consensus 392 ~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDP 465 (504)
T KOG0624|consen 392 GKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDP 465 (504)
T ss_pred ccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCC
Confidence 458999999999999999999999997 78999999999999999998 5553
No 49
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=98.67 E-value=1.7e-08 Score=75.19 Aligned_cols=38 Identities=58% Similarity=0.864 Sum_probs=35.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh---------------------HHHHHHHHcCChh
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK---------------------VLGEAYQVLSDPA 42 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~---------------------~i~eAY~vLsD~~ 42 (382)
++||++|||+++++.++||+||+++ .|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999986 7899999999985
No 50
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.64 E-value=1.4e-08 Score=102.49 Aligned_cols=69 Identities=42% Similarity=0.611 Sum_probs=57.8
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHh---------------------HHHHHHHHcCChhHHHHHHhhCC--CCCCCC
Q 016823 2 VKETEYYDVLGVSPTASEAEIKKAYYIK---------------------VLGEAYQVLSDPAQRQAYDAYGK--SGISTE 58 (382)
Q Consensus 2 ~~~~dyY~iLgV~~~As~~eIKkAYrk~---------------------~i~eAY~vLsD~~~R~~YD~~G~--~~~~~~ 58 (382)
.+..|||.||||..+|+..|||||||++ ++.+||.|||||.+|..||..-. ....++
T Consensus 370 SkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dle~~~~~~ 449 (486)
T KOG0550|consen 370 SKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDLEEVGSGG 449 (486)
T ss_pred hhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccchhhhcCCC
Confidence 4578999999999999999999999996 89999999999999999998322 122334
Q ss_pred CccChHHHHhhh
Q 016823 59 AIIDPAAIFAML 70 (382)
Q Consensus 59 ~~~d~~~~f~~~ 70 (382)
+.+||..+|..+
T Consensus 450 a~~dp~~~~~a~ 461 (486)
T KOG0550|consen 450 AGFDPFNIFRAF 461 (486)
T ss_pred cCcChhhhhhhc
Confidence 678998888776
No 51
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=98.56 E-value=6.5e-08 Score=70.69 Aligned_cols=35 Identities=63% Similarity=0.996 Sum_probs=33.0
Q ss_pred CcccccCCCCCCCHHHHHHHHHHh--------------------HHHHHHHHcCC
Q 016823 6 EYYDVLGVSPTASEAEIKKAYYIK--------------------VLGEAYQVLSD 40 (382)
Q Consensus 6 dyY~iLgV~~~As~~eIKkAYrk~--------------------~i~eAY~vLsD 40 (382)
|||++|||+++++.++||++||++ .|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 699999999999999999999987 68999999986
No 52
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=98.56 E-value=1.2e-06 Score=80.13 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=43.9
Q ss_pred CCCCCcccccCCCCC--CCHHHHHHHHHHh-------------------------HHHHHHHHcCChhHHHHHHh
Q 016823 2 VKETEYYDVLGVSPT--ASEAEIKKAYYIK-------------------------VLGEAYQVLSDPAQRQAYDA 49 (382)
Q Consensus 2 ~~~~dyY~iLgV~~~--As~~eIKkAYrk~-------------------------~i~eAY~vLsD~~~R~~YD~ 49 (382)
|+..+||++|||+++ .+..+|+++||++ .|++||++|+||.+|..|+-
T Consensus 1 ~~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 1 MGTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 467899999999988 5689999999985 89999999999999999985
No 53
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=98.54 E-value=8.4e-07 Score=81.26 Aligned_cols=51 Identities=29% Similarity=0.474 Sum_probs=44.6
Q ss_pred CCCCcccccCCCCC--CCHHHHHHHHHHh-------------------------HHHHHHHHcCChhHHHHHHh--hCCC
Q 016823 3 KETEYYDVLGVSPT--ASEAEIKKAYYIK-------------------------VLGEAYQVLSDPAQRQAYDA--YGKS 53 (382)
Q Consensus 3 ~~~dyY~iLgV~~~--As~~eIKkAYrk~-------------------------~i~eAY~vLsD~~~R~~YD~--~G~~ 53 (382)
...|||++|||+++ ++..+|+++||++ .|++||++|+||.+|..|.- .|..
T Consensus 4 ~~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G~~ 83 (176)
T PRK03578 4 LKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRGVD 83 (176)
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcCCC
Confidence 35799999999985 6889999999986 89999999999999999985 4543
No 54
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=98.50 E-value=1.3e-07 Score=85.78 Aligned_cols=46 Identities=26% Similarity=0.521 Sum_probs=42.3
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHh-----------------------HHHHHHHHcCChhHHHHHHhh
Q 016823 5 TEYYDVLGVSPT--ASEAEIKKAYYIK-----------------------VLGEAYQVLSDPAQRQAYDAY 50 (382)
Q Consensus 5 ~dyY~iLgV~~~--As~~eIKkAYrk~-----------------------~i~eAY~vLsD~~~R~~YD~~ 50 (382)
.|||++|||+++ ++..+|+++||++ .|++||++|+||.+|..|+-.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~ 72 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLL 72 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 589999999987 7899999999976 899999999999999999764
No 55
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.49 E-value=8.1e-08 Score=91.32 Aligned_cols=68 Identities=44% Similarity=0.800 Sum_probs=55.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh---------------------HHHHHHHHcCChhHHHHHHhhCCCCCCCC-----
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK---------------------VLGEAYQVLSDPAQRQAYDAYGKSGISTE----- 58 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~---------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~~~----- 58 (382)
.|||.+|||+++|+..|||+|||++ +|++||+||+|+.+|..||.+|..+....
T Consensus 3 ~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~~ 82 (306)
T KOG0714|consen 3 KDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFSS 82 (306)
T ss_pred ccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCCC
Confidence 6899999999999999999999986 66789999999999999999997544321
Q ss_pred ---------CccChHHHHhhhhC
Q 016823 59 ---------AIIDPAAIFAMLFG 72 (382)
Q Consensus 59 ---------~~~d~~~~f~~~Fg 72 (382)
...++...|..+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~g 105 (306)
T KOG0714|consen 83 SFTSELFYFLFRKPDKDFYEFFG 105 (306)
T ss_pred CCCCCcceeccCchhhhHHHHhC
Confidence 22345566666766
No 56
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=98.49 E-value=1.4e-07 Score=86.03 Aligned_cols=45 Identities=22% Similarity=0.488 Sum_probs=41.2
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHh-------------------------HHHHHHHHcCChhHHHHHHh
Q 016823 5 TEYYDVLGVSPT--ASEAEIKKAYYIK-------------------------VLGEAYQVLSDPAQRQAYDA 49 (382)
Q Consensus 5 ~dyY~iLgV~~~--As~~eIKkAYrk~-------------------------~i~eAY~vLsD~~~R~~YD~ 49 (382)
.|||++|||+++ ++..+||++||++ .|++||++|+||.+|..|+-
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999996 6789999999986 59999999999999999975
No 57
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=9.7e-07 Score=90.10 Aligned_cols=47 Identities=34% Similarity=0.577 Sum_probs=44.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhh
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAY 50 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~ 50 (382)
..|.|.+|||++++++++|||.|||+ .+.-||+||+|+++|..||..
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e 299 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLE 299 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence 46899999999999999999999997 889999999999999999984
No 58
>PHA02624 large T antigen; Provisional
Probab=98.11 E-value=3e-06 Score=90.18 Aligned_cols=68 Identities=22% Similarity=0.242 Sum_probs=53.8
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHh----------------HHHHHHHHcCChhHHHHH--HhhCCCCCCCCCccChH
Q 016823 5 TEYYDVLGVSPTA--SEAEIKKAYYIK----------------VLGEAYQVLSDPAQRQAY--DAYGKSGISTEAIIDPA 64 (382)
Q Consensus 5 ~dyY~iLgV~~~A--s~~eIKkAYrk~----------------~i~eAY~vLsD~~~R~~Y--D~~G~~~~~~~~~~d~~ 64 (382)
.++|++|||+++| +..+||+|||++ +|++||++|+|+.+|..| |..-..+....+..+..
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~v~~~~~~~w~ 90 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSARQSFGTQDSSEIPTYGTPEWE 90 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHhcHHHhhhcccccccccCCCCCccccHH
Confidence 4799999999999 999999999997 899999999999999999 44311233344555666
Q ss_pred HHHhhhhC
Q 016823 65 AIFAMLFG 72 (382)
Q Consensus 65 ~~f~~~Fg 72 (382)
+.+..+|.
T Consensus 91 ~ww~~f~~ 98 (647)
T PHA02624 91 QWWEEFNE 98 (647)
T ss_pred HHHHHhhh
Confidence 66666664
No 59
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.03 E-value=6.1e-06 Score=84.19 Aligned_cols=52 Identities=33% Similarity=0.625 Sum_probs=48.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh-------------------------HHHHHHHHcCChhHHHHHHhhCCCCCC
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK-------------------------VLGEAYQVLSDPAQRQAYDAYGKSGIS 56 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~-------------------------~i~eAY~vLsD~~~R~~YD~~G~~~~~ 56 (382)
-|.|+||||+.+++..+||++||++ .|++||..|+|...|+.|-.+|....+
T Consensus 98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p 174 (610)
T COG5407 98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP 174 (610)
T ss_pred CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence 3789999999999999999999996 899999999999999999999987655
No 60
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=97.99 E-value=3.8e-06 Score=71.88 Aligned_cols=36 Identities=36% Similarity=0.487 Sum_probs=33.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh----------------HHHHHHHHcC
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK----------------VLGEAYQVLS 39 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~----------------~i~eAY~vLs 39 (382)
..++|+||||+++||.+|||++||++ +|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGSTYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999997 9999999984
No 61
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=97.94 E-value=0.00012 Score=66.97 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=41.3
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHh-------------------------HHHHHHHHcCChhHHHHHHh
Q 016823 5 TEYYDVLGVSPT--ASEAEIKKAYYIK-------------------------VLGEAYQVLSDPAQRQAYDA 49 (382)
Q Consensus 5 ~dyY~iLgV~~~--As~~eIKkAYrk~-------------------------~i~eAY~vLsD~~~R~~YD~ 49 (382)
.|||++||+++. .+...+++.||.+ .||+||++|+||-+|..|=-
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 589999999987 8999999999975 89999999999999999844
No 62
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.77 E-value=1e-05 Score=77.44 Aligned_cols=47 Identities=40% Similarity=0.591 Sum_probs=43.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHHHcCChhHHHHHHhhC
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQVLSDPAQRQAYDAYG 51 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~vLsD~~~R~~YD~~G 51 (382)
.|.|++|||.++|+..||.||||++ .|..||++|.|.+.|..||-.-
T Consensus 33 enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 33 ENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred hhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 4789999999999999999999997 7899999999999999999754
No 63
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=97.12 E-value=0.00056 Score=66.22 Aligned_cols=64 Identities=30% Similarity=0.438 Sum_probs=50.1
Q ss_pred CCcccccCCC---CCCCHHHHHHHHHHh----------------------HHHHHHHHcCChhHHHHHHhhCCCC-CCCC
Q 016823 5 TEYYDVLGVS---PTASEAEIKKAYYIK----------------------VLGEAYQVLSDPAQRQAYDAYGKSG-ISTE 58 (382)
Q Consensus 5 ~dyY~iLgV~---~~As~~eIKkAYrk~----------------------~i~eAY~vLsD~~~R~~YD~~G~~~-~~~~ 58 (382)
.|+|.+||++ ..|++.+|.+|-+++ .|+.||+||+|+.+|..||..-... ++..
T Consensus 43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~advppp 122 (379)
T COG5269 43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFDADVPPP 122 (379)
T ss_pred hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccccccCCCCc
Confidence 6899999998 578999999999885 8999999999999999999865542 3333
Q ss_pred CccChHHHHh
Q 016823 59 AIIDPAAIFA 68 (382)
Q Consensus 59 ~~~d~~~~f~ 68 (382)
....|.+||.
T Consensus 123 ~~~t~~~Ffe 132 (379)
T COG5269 123 RIYTPDEFFE 132 (379)
T ss_pred cCCCchhHHH
Confidence 3344555543
No 64
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=96.46 E-value=0.0037 Score=56.32 Aligned_cols=35 Identities=29% Similarity=0.329 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHHh-------------------------HHHHHHHHcCChhHHHHHHhhC
Q 016823 17 ASEAEIKKAYYIK-------------------------VLGEAYQVLSDPAQRQAYDAYG 51 (382)
Q Consensus 17 As~~eIKkAYrk~-------------------------~i~eAY~vLsD~~~R~~YD~~G 51 (382)
.+..+|+++||++ .|++||++|+||.+|..|.-.-
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l 62 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSL 62 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence 3678899999975 8999999999999999998753
No 65
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=95.64 E-value=0.006 Score=59.46 Aligned_cols=25 Identities=44% Similarity=0.663 Sum_probs=23.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK 29 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~ 29 (382)
.++|++|||+++||.+|||+|||++
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L 224 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKL 224 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHH
Confidence 5899999999999999999999987
No 66
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=95.34 E-value=0.023 Score=53.08 Aligned_cols=43 Identities=26% Similarity=0.534 Sum_probs=38.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHh---------------------HHHHHHHHcCChhHHHH
Q 016823 4 ETEYYDVLGVSPTASEAEIKKAYYIK---------------------VLGEAYQVLSDPAQRQA 46 (382)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrk~---------------------~i~eAY~vLsD~~~R~~ 46 (382)
+.+.|++|.|.|..+.++||+-||++ .+..||.+|-|+..|..
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr 115 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKR 115 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 46889999999999999999999997 78899999999986653
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=94.16 E-value=0.054 Score=45.75 Aligned_cols=32 Identities=31% Similarity=0.416 Sum_probs=29.7
Q ss_pred cccCCCCCCCHHHHHHHHHHh----------------HHHHHHHHcCC
Q 016823 9 DVLGVSPTASEAEIKKAYYIK----------------VLGEAYQVLSD 40 (382)
Q Consensus 9 ~iLgV~~~As~~eIKkAYrk~----------------~i~eAY~vLsD 40 (382)
.||||.++++.+.||.|.||. +|+||+++|..
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSPYlAsKINEAKdlLe~ 107 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPYLASKINEAKDLLEG 107 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHhc
Confidence 499999999999999999996 99999999964
No 68
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=88.42 E-value=0.26 Score=47.12 Aligned_cols=36 Identities=31% Similarity=0.555 Sum_probs=32.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh-------------------HHHHHHH-HcCC
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK-------------------VLGEAYQ-VLSD 40 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~-------------------~i~eAY~-vLsD 40 (382)
+.||.+|||..+|+.++++.||.++ .|-+||. ||+.
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999987 8999998 8863
No 69
>KOG0917 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.32 E-value=41 Score=33.24 Aligned_cols=93 Identities=18% Similarity=0.156 Sum_probs=55.6
Q ss_pred HHHHHH-HhHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccccccccCCCC--CCC
Q 016823 245 IDSLWK-LNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNGSD--SCY 321 (382)
Q Consensus 245 L~alW~-~~~~DIE~TLr~VC~kVL~D~~V~~e~R~kRAeAL~~LG~if~~~~~~~~e~~~~~~~~~~~~~~~~~--~~~ 321 (382)
+.+... ..++||-++.-+ |+.+-...|-.|-+.-..|+.-.+ +|++..-..-.+.-+|+| .++
T Consensus 109 vkaFYtA~~~~dILs~FGe----------l~e~~l~~rKYAkWKat~I~~clk----~G~~p~Pg~~~deD~d~di~~~~ 174 (338)
T KOG0917|consen 109 VKAFYTASLLIDILSVFGE----------LTEENLKHRKYAKWKATYIHNCLK----NGETPQPGPVGDEDDDNDIEENE 174 (338)
T ss_pred HHHHHHHHHHHHHHHHhcC----------CChHHHhhhHHhHHHHHHHHHHHh----CCCCCCCCCCCCcccccccCccc
Confidence 444443 446777776654 566777788888888888887765 555544433222222221 222
Q ss_pred CCCCCCCCCCCccccccccCCCCCCCCcccc
Q 016823 322 DASSPITSPKSTEHQESSQSAFASQSPYVEA 352 (382)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (382)
+ -+.+++|.++-+...+|..++..+||.--
T Consensus 175 ~-~s~d~~P~~tGp~~~syp~Py~p~p~~q~ 204 (338)
T KOG0917|consen 175 D-ASADSLPTQTGPTQPSYPSPYDPSPYHQD 204 (338)
T ss_pred c-ccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 3 35677777666666688776666665543
No 70
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=76.94 E-value=1.9 Score=49.32 Aligned_cols=39 Identities=26% Similarity=0.433 Sum_probs=31.5
Q ss_pred CCCCCCcccccCCC----CCCCHHHHHHHHHHh-----------------HHHHHHHHcC
Q 016823 1 MVKETEYYDVLGVS----PTASEAEIKKAYYIK-----------------VLGEAYQVLS 39 (382)
Q Consensus 1 m~~~~dyY~iLgV~----~~As~~eIKkAYrk~-----------------~i~eAY~vLs 39 (382)
|+..-+-|+||.|+ +.-..+.||++|||+ .+++||+.|+
T Consensus 1277 ~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPEGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1277 TMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPEGREMFERVNKAYELLS 1336 (2235)
T ss_pred ccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHH
Confidence 34455779999997 334557899999997 8999999998
No 71
>PF13446 RPT: A repeated domain in UCH-protein
Probab=74.32 E-value=3.4 Score=31.03 Aligned_cols=24 Identities=29% Similarity=0.522 Sum_probs=21.7
Q ss_pred CcccccCCCCCCCHHHHHHHHHHh
Q 016823 6 EYYDVLGVSPTASEAEIKKAYYIK 29 (382)
Q Consensus 6 dyY~iLgV~~~As~~eIKkAYrk~ 29 (382)
+-|+.|||+++.+++.|-.+|+.+
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~ 29 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSK 29 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHH
Confidence 358999999999999999999976
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=69.64 E-value=4.2 Score=35.52 Aligned_cols=33 Identities=27% Similarity=0.248 Sum_probs=25.0
Q ss_pred ccccCCCCCCCHHHHHHHHHHh----------------HHHHHHHHcCC
Q 016823 8 YDVLGVSPTASEAEIKKAYYIK----------------VLGEAYQVLSD 40 (382)
Q Consensus 8 Y~iLgV~~~As~~eIKkAYrk~----------------~i~eAY~vLsD 40 (382)
..||||++..+.++|.+.|.++ +|..|.+.|-.
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSfYLQSKV~rAKErl~~ 109 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGSFYLQSKVFRAKERLEQ 109 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-HHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHH
Confidence 4699999999999999999997 88888888853
No 73
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=54.47 E-value=17 Score=32.95 Aligned_cols=38 Identities=34% Similarity=0.510 Sum_probs=27.9
Q ss_pred HHHHHHHHcCChhHHHHHH--hhCCCCCCCCCccChHHHH
Q 016823 30 VLGEAYQVLSDPAQRQAYD--AYGKSGISTEAIIDPAAIF 67 (382)
Q Consensus 30 ~i~eAY~vLsD~~~R~~YD--~~G~~~~~~~~~~d~~~~f 67 (382)
++++||..|.||-.|+.|= ..|.+.....-..||.-.+
T Consensus 60 ~lnkAY~TLk~pL~RA~Yilkl~g~e~~sne~stDpe~Lm 99 (168)
T KOG3192|consen 60 ELNKAYDTLKDPLARARYLLKLKGQEQTSNELSTDPEFLM 99 (168)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCCchhhhccCHHHHH
Confidence 8999999999999999994 4665555444444776443
No 74
>PF03207 OspD: Borrelia outer surface protein D (OspD); InterPro: IPR004894 This is a family of outer surface proteins from Borrelia. The function of these proteins is unknown.
Probab=51.18 E-value=1.4e+02 Score=27.59 Aligned_cols=30 Identities=17% Similarity=0.397 Sum_probs=24.7
Q ss_pred HHHHHHHHHh------HHHHHHHHHHHHHHhhcCCC
Q 016823 243 LMIDSLWKLN------VADIEATLSRVCQMVLQDNN 272 (382)
Q Consensus 243 ~iL~alW~~~------~~DIE~TLr~VC~kVL~D~~ 272 (382)
..++..|+.+ ++|||+||++.-+++-.+..
T Consensus 187 eaveiawkatv~akd~lidve~~vke~ldkiktet~ 222 (254)
T PF03207_consen 187 EAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETT 222 (254)
T ss_pred HHHHHHHHHHhhhhhhHhhHHHHHHHHHHHHhhhcc
Confidence 4578899876 48999999999999977653
No 75
>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=44.72 E-value=1.9e+02 Score=30.06 Aligned_cols=68 Identities=22% Similarity=0.158 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH------HHHhcc
Q 016823 229 TEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGK------IFQRAK 296 (382)
Q Consensus 229 ~eee~~~~~~~~~~~iL~alW~~~~~DIE~TLr~VC~kVL~D~~V~~e~R~kRAeAL~~LG~------if~~~~ 296 (382)
++++..+........-|+.+..-.+++=-.-.-+-|.+||.=..=+.+-+.+|++||..||+ .|+++.
T Consensus 245 ~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~kvLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~ 318 (397)
T KOG0543|consen 245 DEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNKVLELDPNNVKALYRRGQALLALGEYDLARDDFQKAL 318 (397)
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHHHHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 44554444444445556666666666666678889999999888888999999999999986 466554
No 76
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=37.15 E-value=20 Score=32.63 Aligned_cols=25 Identities=40% Similarity=0.466 Sum_probs=23.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHh
Q 016823 5 TEYYDVLGVSPTASEAEIKKAYYIK 29 (382)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrk~ 29 (382)
.+.|.+|||.+.+...+|+++||++
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l 137 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKL 137 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHH
Confidence 5779999999999999999999986
No 77
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=34.16 E-value=86 Score=25.93 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=24.7
Q ss_pred HHHHHHHHHH---HHhhcCCCCCHHHHHHHHHHHHHH
Q 016823 255 DIEATLSRVC---QMVLQDNNAKKEELRARAKALKTL 288 (382)
Q Consensus 255 DIE~TLr~VC---~kVL~D~~V~~e~R~kRAeAL~~L 288 (382)
|-+.++++|| +.|.+|.+||...|+.-.+|.-.|
T Consensus 10 d~~e~i~q~~~lL~~Ii~DttVPRNIRraA~~a~e~L 46 (93)
T COG1698 10 DSEEKINQVMQLLDEIIQDTTVPRNIRRAAEEAKEAL 46 (93)
T ss_pred hhHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHH
Confidence 4444444444 347899999999999888887765
No 78
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=33.60 E-value=50 Score=30.83 Aligned_cols=26 Identities=31% Similarity=0.255 Sum_probs=21.0
Q ss_pred CCCCCHHHHHHHHHHh------------HHHHHHHHcC
Q 016823 14 SPTASEAEIKKAYYIK------------VLGEAYQVLS 39 (382)
Q Consensus 14 ~~~As~~eIKkAYrk~------------~i~eAY~vLs 39 (382)
+++||-+||.+|+.++ .|-.||+.+-
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDEKSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 5799999999999876 7777887443
No 79
>PF04719 TAFII28: hTAFII28-like protein conserved region; InterPro: IPR006809 The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcription preinitiation complex. The conserved region is found at the C terminus of most member proteins. The crystal structure of hTAFII28 with hTAFII18 shows that this region is involved in the binding of these two subunits. The conserved region contains four alpha helices and three loops arranged as in histone H3 [, ].; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005634 nucleus; PDB: 1BH9_B 1BH8_B.
Probab=29.03 E-value=2.3e+02 Score=23.24 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcCCCCCHHHHH-HHHHHHHHHHHHHHhc
Q 016823 258 ATLSRVCQMVLQDNNAKKEELR-ARAKALKTLGKIFQRA 295 (382)
Q Consensus 258 ~TLr~VC~kVL~D~~V~~e~R~-kRAeAL~~LG~if~~~ 295 (382)
.+||++|..|+.+.+|+..... -++-|=.++|+|...+
T Consensus 27 ~~ikkli~~~~~~qsv~~~v~i~v~g~aKvFVGEiVE~A 65 (90)
T PF04719_consen 27 AAIKKLINQVLGNQSVSQNVVIAVAGIAKVFVGEIVEEA 65 (90)
T ss_dssp HHHHHHHHHHHS-S---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999988999987653 3444555666666554
No 80
>PF12316 Dsh_C: Segment polarity protein dishevelled (Dsh) C terminal; InterPro: IPR024580 Wnt proteins constitute a large family of secreted signalling molecules that are involved in intercellular signalling during development. The name derives from the first 2 members of the family to be discovered: int-1 (mouse) and wingless (Wg) (Drosophila) []. It is now recognised that Wnt signalling controls many cell fate decisions in a variety of different organisms, including mammals. Wnt signalling has been implicated in tumourigenesis, early mesodermal patterning of the embryo, morphogenesis of the brain and kidneys, regulation of mammary gland proliferation and Alzheimer's disease []. Wnt signal transduction proceeds initially via binding to their cell surface receptors - the so-called frizzled proteins. This activates the signalling functions of B-catenin and regulates the expression of specific genes important in development []. More recently, however, several non-canonical Wnt signalling pathways have been elucidated that act independently of B-catenin. In both cases, the transduction mechanism requires dishevelled protein (Dsh), a cytoplasmic phosphoprotein that acts directly downstream of frizzled []. In addition to its role in Wnt signalling, Dsh is also involved in generating planar polarity in Drosophila and has been implicated in the Notch signal transduction cascade. Three human and mouse homologues of Dsh have been cloned (DVL-1 to 3); it is believed that these proteins, like their Drosophila counterpart, are involved in signal transduction. Human and murine orthologues share more than 95% sequence identity and are each 40-50% identical to Drosophila Dsh. Sequence similarity amongst Dsh proteins is concentrated around three conserved domains: at the N terminus lies a DIX domain (mutations mapping to this region reduce or completely disrupt Wg signalling); a PDZ (or DHR) domain, often found in proteins involved in protein-protein interactions, lies within the central portion of the protein (point mutations within this module have been shown to have little effect on Wg-mediated signal transduction); and a DEP domain is located towards the C terminus and is conserved among a set of proteins that regulate various GTPases (whilst genetic and molecular assays have shown this module to be dispensable for Wg signalling, it is thought to be important in planar polarity signalling in flies []). This entry represents a domain found in the C-terminal of Dsh proteins.; PDB: 3ML6_D.
Probab=27.74 E-value=17 Score=34.14 Aligned_cols=18 Identities=33% Similarity=0.263 Sum_probs=0.0
Q ss_pred ccCCCCCCCCCCCCCCCC
Q 016823 313 KLNGSDSCYDASSPITSP 330 (382)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~ 330 (382)
+|||||+||-+++-||..
T Consensus 6 sLnd~dGSSGaSDQDTLA 23 (203)
T PF12316_consen 6 SLNDNDGSSGASDQDTLA 23 (203)
T ss_dssp ------------------
T ss_pred cccCCCCCcccccccccc
Confidence 688889998776677765
No 81
>PF08405 Calici_PP_N: Viral polyprotein N-terminal; InterPro: IPR013614 This domain is found at the N terminus of non-structural viral polyproteins of the Caliciviridae subfamily. ; GO: 0003968 RNA-directed RNA polymerase activity, 0004197 cysteine-type endopeptidase activity, 0017111 nucleoside-triphosphatase activity, 0044419 interspecies interaction between organisms
Probab=21.14 E-value=4.8e+02 Score=26.49 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=17.9
Q ss_pred cchhHHHhhc-cchhHHHHHHHHHHHHHHHH
Q 016823 184 VPFIAEWFRN-KGHFIKSQVTAATGAIALIQ 213 (382)
Q Consensus 184 ~~~~~~~~r~-kg~~~K~~~~~~~~A~~~~~ 213 (382)
++......++ .|++++++.+++++|.++=+
T Consensus 232 iGm~~GfT~ekigr~l~sa~~~Lra~~~lG~ 262 (358)
T PF08405_consen 232 IGMALGFTSEKIGRMLSSAASGLRAATELGQ 262 (358)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333343 36778888888877766543
Done!