RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 016832
(382 letters)
>gnl|CDD|178126 PLN02510, PLN02510, probable 1-acyl-sn-glycerol-3-phosphate
acyltransferase.
Length = 374
Score = 659 bits (1703), Expect = 0.0
Identities = 259/367 (70%), Positives = 304/367 (82%)
Query: 7 LKCDNRLKRRPLTPIRVFRGLICLLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSF 66
L+ D+ K RPLTP+R RGLICLLV TAFM LVY AP+ A++LR+FSVH+ RKATSF
Sbjct: 1 LESDSGPKHRPLTPLRRLRGLICLLVLLSTAFMMLVYLAPVSAVLLRLFSVHYSRKATSF 60
Query: 67 LFGLWLALWPFLFEKINRTTMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLG 126
FG WLALWPFLFEKIN+T +VFSGD VP EERVLL+ANHRTEVDWMY+WDLALRKGCLG
Sbjct: 61 FFGSWLALWPFLFEKINKTKVVFSGDKVPPEERVLLIANHRTEVDWMYLWDLALRKGCLG 120
Query: 127 YIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPE 186
YIKY+LKSSLMKLPVFGW FHI EFI VER WE+DE +RQMLS+F++P DPLWL +FPE
Sbjct: 121 YIKYVLKSSLMKLPVFGWAFHIFEFIPVERKWEVDEPNIRQMLSSFKDPRDPLWLALFPE 180
Query: 187 GTDFTEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKNPC 246
GTD+TE K RSQKFAA+ GLP+L NVLLPKT+GF CL+ LR +LDAVYD+TI YK+ C
Sbjct: 181 GTDYTEAKCQRSQKFAAEHGLPILNNVLLPKTKGFVSCLQELRCSLDAVYDVTIGYKHRC 240
Query: 247 PSFMDNVFGVDPSEVHIHVRRIPVKEIPASETDAAAWLMDAFQLKDQLLDKFNAQGHFPN 306
PSF+DNVFG+DPSEVHIH+RRIP+K+IP SE + +AWLMD FQLKDQLL F AQGHFPN
Sbjct: 241 PSFLDNVFGIDPSEVHIHIRRIPLKQIPTSEDEVSAWLMDRFQLKDQLLSDFYAQGHFPN 300
Query: 307 QCQENELSTLKCLVNFIVVISLTAIFTYLTLFSSIWYKIYVGLACTSLASVTYFNIHPML 366
+ E ELSTLKCL NF+ VI+LT +FTYLTLFSS+W+KIYV L+C L S T+FN P
Sbjct: 301 EGTEGELSTLKCLANFLAVIALTTVFTYLTLFSSVWFKIYVSLSCAYLTSATHFNWRPPP 360
Query: 367 VVGFSKA 373
++ +
Sbjct: 361 LIESLEN 367
>gnl|CDD|153252 cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acyltransferases
(LPLATs) of Glycerophospholipid Biosynthesis:
LCLAT1-like. Lysophospholipid acyltransferase (LPLAT)
superfamily member: acyltransferases of de novo and
remodeling pathways of glycerophospholipid biosynthesis
which catalyze the incorporation of an acyl group from
either acylCoAs or acyl-acyl carrier proteins (acylACPs)
into acceptors such as glycerol 3-phosphate,
dihydroxyacetone phosphate or lyso-phosphatidic acid.
Included in this subgroup are such LPLATs as
Lysocardiolipin acyltransferase 1 (LCLAT1) or
1-acyl-sn-glycerol-3-phosphate acyltransferase and
similar proteins.
Length = 193
Score = 238 bits (609), Expect = 6e-78
Identities = 96/193 (49%), Positives = 131/193 (67%), Gaps = 2/193 (1%)
Query: 76 PFLFEKINRTTMVFSGDIVPV-EERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKS 134
FLFE ++ +V GD + +ER L+++NHR+EVDW+ +W LA R G LG +K +LK
Sbjct: 1 VFLFEWLSGVKVVVYGDEPKLPKERALIISNHRSEVDWLVLWMLADRFGRLGRLKIVLKD 60
Query: 135 SLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEK 194
SL P+ GWG+ + EFI ++R WE DE +++ L ++ +P WL IFPEGT FTEEK
Sbjct: 61 SLKYPPLGGWGWQLGEFIFLKRKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEEK 120
Query: 195 RNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKNPCP-SFMDNV 253
+ RSQ+FA GLP L +VLLP+T+GF LETLR+ +DAVYD+TIAY + P S +
Sbjct: 121 KERSQEFAEKNGLPPLKHVLLPRTKGFVAILETLRDAVDAVYDVTIAYPDGKPPSEQRLL 180
Query: 254 FGVDPSEVHIHVR 266
G P EVH+HVR
Sbjct: 181 LGGKPREVHVHVR 193
>gnl|CDD|178006 PLN02380, PLN02380, 1-acyl-sn-glycerol-3-phosphate acyltransferase.
Length = 376
Score = 203 bits (517), Expect = 6e-62
Identities = 106/341 (31%), Positives = 172/341 (50%), Gaps = 20/341 (5%)
Query: 31 LVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFG-LWLALWPFLFE-----KINR 84
L+F + + + I++R S R+ + LWL L +L + K+
Sbjct: 14 LLFLLSGL-IVNLIQAVCFILVRPLSKSLYRRINRAVAELLWLEL-IWLVDWWAGVKVQL 71
Query: 85 TTMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGW 144
+ +++ +E L+++NHR+++DW+ W LA R GCLG ++K S LPV GW
Sbjct: 72 YADEETFELMG-KEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGW 130
Query: 145 GFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAAD 204
E++ +ER+W DE+ ++ ++ P WL +F EGT FT+ K +Q++AA
Sbjct: 131 SMWFSEYVFLERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAKLLAAQEYAAS 190
Query: 205 VGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKN--PCPSFMDNVFGVDPSEVH 262
GLPV NVL+P+T+GF + +R+ + A+YD+T+A P P+ M +F S VH
Sbjct: 191 RGLPVPRNVLIPRTKGFVSAVSNMRSFVPAIYDVTVAVPKGQPAPT-MLRIFRGQSSVVH 249
Query: 263 IHVRRIPVKEIPASETDAAAWLMDAFQLKDQLLDKFNAQGHFPNQCQENELSTLKCLVNF 322
+H++R +KE+P ++ A W D F KD LLDK A+ F +Q ++ K L
Sbjct: 250 VHIKRHSMKELPETDDGIAQWCKDVFVAKDALLDKHFAEDTFGDQEYQDIGRPKKSL--- 306
Query: 323 IVVISLTAIFTYLTLFSSIWYKIY-----VGLACTSLASVT 358
IVVIS + + W + + L VT
Sbjct: 307 IVVISWACLLILGAIKFLQWLSLLSSWKGIASLAAGLVIVT 347
>gnl|CDD|214724 smart00563, PlsC, Phosphate acyltransferases. Function in
phospholipid biosynthesis and have either
glycerolphosphate, 1-acylglycerolphosphate, or
2-acylglycerolphosphoethanolamine acyltransferase
activities. Tafazzin, the product of the gene mutated in
patients with Barth syndrome, is a member of this
family.
Length = 118
Score = 85.5 bits (212), Expect = 2e-20
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 100 VLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWE 159
L++ANH++ +D + + L RK G ++++ K L +P+ GW +L I ++R+
Sbjct: 1 ALVVANHQSFLDPLVLSALLPRKL--GRVRFVAKKELFYVPLLGWLLRLLGAIFIDRSNG 58
Query: 160 -IDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVL 214
+R+ + + + WL IFPEGT K +K AA + L ++
Sbjct: 59 RKARAALREAVELLK---EGEWLLIFPEGTRSRPGKLLPFKKGAARLALEAGVPIV 111
>gnl|CDD|237584 PRK14014, PRK14014, putative acyltransferase; Provisional.
Length = 301
Score = 77.6 bits (192), Expect = 5e-16
Identities = 76/306 (24%), Positives = 135/306 (44%), Gaps = 42/306 (13%)
Query: 24 FRGLI-CLLVFFFTAFMF-LVYFAPIIAIILRMFSVHH-CRKATSFLFGLWLALWPFLFE 80
RGL+ LL+ T F + ++ ++L + ++ C + +F+ W+++ +
Sbjct: 9 LRGLLSILLLILNTLFWSVPIIILGLLKLLLPIPAIRRACSRLLNFIAEAWISINNVILR 68
Query: 81 KINRTTMVFSGDI-VPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKL 139
+ RT G + + L+++NH++ VD + + + R+ + +K+ LK L+ +
Sbjct: 69 LLPRTQWDVEGLEGLSKKGWYLVISNHQSWVDILVLQYVFNRR--IPMLKFFLKQELIWV 126
Query: 140 PVFGWGFHILEF--------ISVERNWEI---DEHVMRQMLSTFRN-PNDPLWLTI--FP 185
P G + L+F + +N E+ D R+ F+ P TI F
Sbjct: 127 PFLGLAWWALDFPFMKRYSKAYLAKNPELKGKDLETTRRACEKFKRMPT-----TIVNFV 181
Query: 186 EGTDFTEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKNP 245
EGT FT EK + Q P ++L PK G L + D + D+TI Y +
Sbjct: 182 EGTRFTPEKHQQQQS-------P-YQHLLKPKAGGIAFALNAMGEQFDGLLDVTIVYPDG 233
Query: 246 CPSFMDNVFGVDPSEVHIHVRRIPVKEIPAS--ETDAA------AWLMDAFQLKDQLLDK 297
PSF D + G ++ +HVR +P+ E D WL +Q KDQL+++
Sbjct: 234 RPSFWDLLSG-RVKKIVVHVRLLPIPEELIGDYFNDKEFRRRFQQWLNQLWQEKDQLIEQ 292
Query: 298 FNAQGH 303
AQ +
Sbjct: 293 LLAQYN 298
>gnl|CDD|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases
(LPLATs) of Glycerophospholipid Biosynthesis:
AGPAT-like. Lysophospholipid acyltransferase (LPLAT)
superfamily member: acyltransferases of de novo and
remodeling pathways of glycerophospholipid biosynthesis
which catalyze the incorporation of an acyl group from
either acylCoAs or acyl-acyl carrier proteins (acylACPs)
into acceptors such as glycerol 3-phosphate,
dihydroxyacetone phosphate or lyso-phosphatidic acid.
Included in this subgroup are such LPLATs as
1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT,
PlsC), Tafazzin (product of Barth syndrome gene), and
similar proteins.
Length = 184
Score = 65.8 bits (161), Expect = 9e-13
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 25/130 (19%)
Query: 92 DIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEF 151
+ +P + V+++ANH++ +D + + R I+++ K L K+P GW +L
Sbjct: 18 ENLPPKGPVIIVANHQSYLDPLVLGAALPRP-----IRFVAKKELFKIPFLGWLLRLLGA 72
Query: 152 ISVER-NWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRS---QKF------ 201
I ++R N +R+ + + + IFPEGT R+R F
Sbjct: 73 IPIDRGNGRSAREALREAIEALKEGE---SVVIFPEGT------RSRDGELLPFKSGAFR 123
Query: 202 -AADVGLPVL 210
A + G+P++
Sbjct: 124 LAKEAGVPIV 133
>gnl|CDD|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase
[Lipid metabolism].
Length = 255
Score = 65.3 bits (159), Expect = 5e-12
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 16/186 (8%)
Query: 30 LLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFGLWLALWPFLFEKINRTTMVF 89
L + + L P+ ++ +F + F + L L F ++ V
Sbjct: 1 LRLALLLILVILFLLLPLPLALIALFRLRRPVLRRWLRFLVLLLLLLFGL-RVE----VE 55
Query: 90 SGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHIL 149
+ +P L++ANH++ +D + + R+G ++++ K L K+P+ GW +L
Sbjct: 56 GLENLPKGGPALVVANHQSFLDPLLLSLALPRRG---PVRFVAKKELFKVPLLGWLLRLL 112
Query: 150 EFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQK-----FAAD 204
I V+R DE +R ++ + L IFPEGT + K A +
Sbjct: 113 GAIPVDRENPDDE-TLRAAVARLK--AGGRSLVIFPEGTRSRGGEELLPFKRGAARLALE 169
Query: 205 VGLPVL 210
G+P++
Sbjct: 170 AGVPIV 175
>gnl|CDD|216567 pfam01553, Acyltransferase, Acyltransferase. This family contains
acyltransferases involved in phospholipid biosynthesis
and other proteins of unknown function. This family also
includes tafazzin, the Barth syndrome gene.
Length = 131
Score = 62.3 bits (152), Expect = 5e-12
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 92 DIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEF 151
+ +P +++ANH++ +D + + L L K + ++ K L+ LP+ GW +L
Sbjct: 8 ENLPRGGPAIVVANHQSYLDPLLLS-LLLPKRGRPLV-FVAKDELLNLPLLGWLMRLLGC 65
Query: 152 ISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEK 194
I ++R D + L + + IFPEGT +
Sbjct: 66 IFIDRKNAKDAANTLEYLVELLREGELVL--IFPEGTRSRGGE 106
>gnl|CDD|153244 cd06551, LPLAT, Lysophospholipid acyltransferases (LPLATs) of
glycerophospholipid biosynthesis. Lysophospholipid
acyltransferase (LPLAT) superfamily members are
acyltransferases of de novo and remodeling pathways of
glycerophospholipid biosynthesis. These proteins
catalyze the incorporation of an acyl group from either
acylCoAs or acyl-acyl carrier proteins (acylACPs) into
acceptors such as glycerol 3-phosphate, dihydroxyacetone
phosphate or lyso-phosphatidic acid. Included in this
superfamily are LPLATs such as glycerol-3-phosphate
1-acyltransferase (GPAT, PlsB),
1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT,
PlsC), lysophosphatidylcholine acyltransferase 1
(LPCAT-1), lysophosphatidylethanolamine acyltransferase
(LPEAT, also known as, MBOAT2, membrane-bound
O-acyltransferase domain-containing protein 2), lipid A
biosynthesis lauroyl/myristoyl acyltransferase,
2-acylglycerol O-acyltransferase (MGAT),
dihydroxyacetone phosphate acyltransferase (DHAPAT, also
known as 1 glycerol-3-phosphate O-acyltransferase 1) and
Tafazzin (the protein product of the Barth syndrome
(TAZ) gene).
Length = 187
Score = 60.9 bits (148), Expect = 5e-11
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 13/128 (10%)
Query: 71 WLALWPFLFEKINRTTMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKY 130
+L L F F ++ P VL ++NH + D + ++ L L +G +
Sbjct: 3 YLLLNFFGFVRLEVKG----PPPPPGGGPVLFVSNHSSWWDGLILF-LLLERGLRRDVYG 57
Query: 131 ILK-SSLMKLPVFGWGFHILEFISVERNWEI-DEHVMRQMLSTFRNPNDPLWLTIFPEGT 188
++ L + P F SV+R+ ++ + P +W IFPEGT
Sbjct: 58 LMDEELLERYPFFTRLG----AFSVDRDSPRSAAKSLKYVARLLSKPGSVVW--IFPEGT 111
Query: 189 DFTEEKRN 196
+KR
Sbjct: 112 RTRRDKRP 119
>gnl|CDD|153253 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acyltransferases
(LPLATs) of Glycerophospholipid Biosynthesis:
LPCAT1-like. Lysophospholipid acyltransferase (LPLAT)
superfamily member: acyltransferases of de novo and
remodeling pathways of glycerophospholipid biosynthesis
which catalyze the incorporation of an acyl group from
either acylCoAs or acyl-acyl carrier proteins (acylACPs)
into acceptors such as glycerol 3-phosphate,
dihydroxyacetone phosphate or lyso-phosphatidic acid.
Included in this subgroup are such LPLATs as
lysophosphatidylcholine acyltransferase 1 (LPCAT-1),
glycerol-3-phosphate acyltransferase 3 (GPAT3), and
similar sequences.
Length = 211
Score = 40.3 bits (95), Expect = 7e-04
Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 72 LALWPFLFEKINRTTMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYI 131
+ L+ F F I G P E +++ANH + +D + + + +
Sbjct: 3 VLLFAFGFYVIK-----VHGKPDPPEAPRIIVANHTSFIDPLIL-------FSDLFPSIV 50
Query: 132 LKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLT--IFPEGT 188
K L KLP G L I V+R+ D + + + DP W IFPEGT
Sbjct: 51 AKKELGKLPFIGTILRALGCIFVDRSEPKDRKKVVEEIK--ERATDPNWPPILIFPEGT 107
>gnl|CDD|153250 cd07988, LPLAT_ABO13168-like, Lysophospholipid Acyltransferases
(LPLATs) of Glycerophospholipid Biosynthesis: Unknown
ABO13168. Lysophospholipid acyltransferase (LPLAT)
superfamily member: acyltransferases of de novo and
remodeling pathways of glycerophospholipid biosynthesis
which catalyze the incorporation of an acyl group from
either acylCoAs or acyl-acyl carrier proteins (acylACPs)
into acceptors such as glycerol 3-phosphate,
dihydroxyacetone phosphate or lyso-phosphatidic acid.
Included in this subgroup are uncharacterized
phospholipid/glycerol acyltransferases such as the
Acinetobacter baumannii ATCC 17978 locus ABO13168
putative acyltransferase, and similar proteins.
Length = 163
Score = 38.7 bits (91), Expect = 0.001
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 27/122 (22%)
Query: 100 VLLMANHRTEVDWMYV----WDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVE 155
V++ A H + D++ + L L+ I ++ K SL K P G L I V+
Sbjct: 23 VVIGAPHTSNWDFVLGLLAAFALGLK------ISFLGKHSLFKPP-LGPFMRWLGGIPVD 75
Query: 156 RNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKF-------AADVGLP 208
R+ ++ Q++ FR + L I PEGT R++ K+ A G+P
Sbjct: 76 RSRAGG--LVEQVVEEFRR-REEFVLAIAPEGT------RSKVDKWKTGFYHIARGAGVP 126
Query: 209 VL 210
+L
Sbjct: 127 IL 128
>gnl|CDD|129621 TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosphate
acyltransferases. This model describes the core
homologous region of a collection of related proteins,
several of which are known to act as
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC
2.3.1.51). Proteins scoring above the trusted cutoff are
likely to have the same general activity. However, there
is variation among characterized members as to whether
the acyl group can be donated by acyl carrier protein or
coenzyme A, and in the length and saturation of the
donated acyl group. 1-acyl-sn-glycerol-3-phosphate
acyltransferase is also called 1-AGP acyltransferase,
lysophosphatidic acid acyltransferase, and LPA
acyltransferase [Fatty acid and phospholipid metabolism,
Biosynthesis].
Length = 130
Score = 36.2 bits (84), Expect = 0.007
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 93 IVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFI 152
+P + VL++ANH++ +D L L I +I K L +P FG + I
Sbjct: 11 NLPAKSPVLVVANHQSNLD-----PLTLSAAFPPPIVFIAKKELKWIPFFGIMLWLTGAI 65
Query: 153 SVER-NWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKF---------- 201
++R N ++ + + + +FPEGT R+R +
Sbjct: 66 FIDRENIRAIATALKAAIEVLKQ-GRSIG--VFPEGT------RSRGRDILPFKKGAFHI 116
Query: 202 AADVGLPVLTNVL 214
A G+P+L VL
Sbjct: 117 AIKAGVPILPVVL 129
>gnl|CDD|219625 pfam07895, DUF1673, Protein of unknown function (DUF1673). This
family contains hypothetical proteins of unknown
function expressed by two archaeal species.
Length = 204
Score = 34.6 bits (80), Expect = 0.052
Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 11 NRLKRRPLTPIRVFRGLICLLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFGL 70
+ L ++P+ + ++ L+ + L+ F I S+ + SF+ GL
Sbjct: 107 DALAKKPVIRYSNKKKIVRSLLVIILLLILLLLFLYYIL--GHFESLLSAQAILSFISGL 164
Query: 71 WLALWPFLF-----EKINRTTMVFSG 91
+ +W F EK N + +
Sbjct: 165 LVLMWLVYFQLIYWEKKNHKIIYITK 190
>gnl|CDD|153254 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acyltransferases
(LPLATs) of Glycerophospholipid Biosynthesis: Unknown
AAK14816-like. Lysophospholipid acyltransferase (LPLAT)
superfamily member: acyltransferases of de novo and
remodeling pathways of glycerophospholipid biosynthesis
which catalyze the incorporation of an acyl group from
either acylCoAs or acyl-acyl carrier proteins (acylACPs)
into acceptors such as glycerol 3-phosphate,
dihydroxyacetone phosphate or lyso-phosphatidic acid.
Included in this subgroup are uncharacterized
glycerol-3-phosphate acyltransferases such as the
Plasmodium falciparum locus AAK14816 putative
acyltransferase, and similar proteins.
Length = 203
Score = 34.5 bits (80), Expect = 0.053
Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 21/128 (16%)
Query: 70 LWLALWPFLFEKINRTTMVFSGDIVPVEERVLLMANHRTE-VDWMYVWDLALRKGCLGYI 128
+ L + F +I V + VP + V+ + NH +D L L +
Sbjct: 5 SRVILRIY-FRRIT----VVGRENVPKDGPVIFLGNHPNALID-----PLLLAATLRRPV 54
Query: 129 KYILKSSLMKLPVFGWGFHILEFISVERN----WEIDEHVMRQMLSTFRNPNDPL----W 180
+++ K+ L K P+ GW I V R + F + L
Sbjct: 55 RFLAKADLFKNPLIGWLLESFGAIPVYRPKDLARGGIGKISNAA--VFDAVGEALKAGGA 112
Query: 181 LTIFPEGT 188
+ IFPEG
Sbjct: 113 IGIFPEGG 120
>gnl|CDD|215488 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate acyltransferase.
Length = 214
Score = 34.3 bits (79), Expect = 0.059
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 61 RKATSFLFGLWLALWPFLFEKINRTTMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLAL 120
RKA F+ +W L F KI + ++ +E + ++NH++ +D +Y L
Sbjct: 16 RKAQHFINKVWATLSTSPFYKIE---VEGLENLPSPDEPAVYVSNHQSFLD-IYTL-FHL 70
Query: 121 RKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLW 180
+ K+I K+S+ +P+ GW ++ I ++R +D R L + + L
Sbjct: 71 GRP----FKFISKTSIFLIPIIGWAMYMTGHIPLKR---MDR---RSQLECLKRCMELLK 120
Query: 181 ----LTIFPEGTDFTEEKRNRSQK----FAADVGLPVLTNVLL 215
+ FPEGT + K +K AA G+PV+ L+
Sbjct: 121 KGASVFFFPEGTRSKDGKLAAFKKGAFSVAAKTGVPVVPITLV 163
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine
acyltransferase; Validated.
Length = 1146
Score = 33.7 bits (78), Expect = 0.17
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 94 VPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFIS 153
+P + LL+ NH + +DW + + R I+++++ S+ + W F + I
Sbjct: 437 IPAKGGALLLGNHVSWIDWALLQAASPRP-----IRFVMERSIYEKWYLKWFFKLFGVIP 491
Query: 154 VERNWEIDEHVMRQMLSTFRNP-NDPLWLTIFPEGT 188
+ ++ L R +D + IFPEG
Sbjct: 492 ISSG------GSKESLEFIRKALDDGEVVCIFPEGA 521
>gnl|CDD|233993 TIGR02745, ccoG_rdxA_fixG, cytochrome c oxidase accessory protein
FixG. Member of this ferredoxin-like protein family are
found exclusively in species with an operon encoding the
cbb3 type of cytochrome c oxidase (cco-cbb3), and near
the cco-cbb3 operon in about half the cases. The
cco-cbb3 is found in a variety of proteobacteria and
almost nowhere else, and is associated with oxygen use
under microaerobic conditions. Some (but not all) of
these proteobacteria are also nitrogen-fixing, hence the
gene symbol fixG. FixG was shown essential for
functional cco-cbb3 expression in Bradyrhizobium
japonicum.
Length = 434
Score = 31.1 bits (71), Expect = 1.1
Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 20/87 (22%)
Query: 11 NRLKRRPLTPIRVFRG----LICLLVFFFTAFMFLVYFAPI--IAIILRMFSVHHCRKAT 64
+L + P T +V++ L+ L++ T F+ YF P + L H
Sbjct: 105 MKLDKAPWTFDKVWKKTLKHLLWLVISLVTGGTFIFYFVPAPDLFAYLFTGPADH----- 159
Query: 65 SFLFGLWLALWPFLFEKINRTTMVFSG 91
W F T +F G
Sbjct: 160 ------PAYFWVLFF---TAATYIFDG 177
>gnl|CDD|216329 pfam01148, CTP_transf_1, Cytidylyltransferase family. The members
of this family are integral membrane protein
cytidylyltransferases. The family includes phosphatidate
cytidylyltransferase EC:2.7.7.41 as well as Sec59 from
yeast. Sec59 is a dolichol kinase EC:2.7.1.108.
Length = 259
Score = 30.4 bits (69), Expect = 1.3
Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 16/133 (12%)
Query: 21 IRVFRGLICLLVFFFTAFMFLVYFAPIIAII--------LRMFSVHHCRKAT--SFLFGL 70
R+ ++ +L+F F+ + F ++A I +R+ + + + GL
Sbjct: 2 QRIITHIVLILIFLILLFLGPLIFLLLVAAIIILALYELIRLLRLKFSSRLLLLTRGLGL 61
Query: 71 WLALWPFLFEKINRTTMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKY 130
L L +F ++ + LL+ + ++ L Y+
Sbjct: 62 IFYLLGLLLVYGEGLLALFGLVLLVIPVLWLLVLP------VLAYHRVSSTLLPLFYVGL 115
Query: 131 ILKSSLMKLPVFG 143
L L+ P FG
Sbjct: 116 FLSLLLITNPFFG 128
>gnl|CDD|218842 pfam05987, DUF898, Bacterial protein of unknown function (DUF898).
This family consists of several bacterial proteins of
unknown function. Some of the family members are
described as putative membrane proteins.
Length = 339
Score = 30.2 bits (69), Expect = 2.0
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 16/61 (26%)
Query: 19 TPIRVFRGLICLLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFGLWLALWPFL 78
T + +G + LV A+ V +P++ ++ L L+LAL P+L
Sbjct: 61 TGGEILKGFLIALVLLV-AYYIAVQLSPLLGLV---------------LLLLFLALLPWL 104
Query: 79 F 79
Sbjct: 105 I 105
>gnl|CDD|219640 pfam07916, TraG_N, TraG-like protein, N-terminal region. The
bacterial sequences found in this family are similar to
the N-terminal region of the TraG protein. This is a
membrane-spanning protein, with three predicted
transmembrane segments and two periplasmic regions. TraG
protein is known to be essential for DNA transfer in the
process of conjugation, with the N-terminal portion
being required for F pilus assembly. The protein is
thought to interact with the periplasmic domain of TraN
to stabilise mating-cell interactions.
Length = 462
Score = 29.6 bits (67), Expect = 2.8
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 15/50 (30%)
Query: 38 FMFLVYFAPIIAII--------LRMFSVHHCRKATSFLFGLWLALWPFLF 79
M + P++ ++ L + + + FL WLA WP LF
Sbjct: 338 EMAIYALFPLVLVLSLLLGTGGLAILAGY-------FLTFWWLARWPPLF 380
>gnl|CDD|218671 pfam05640, NKAIN, Na,K-Atpase Interacting protein. NKAIN
(Na,K-Atpase INteracting) proteins are a family of
evolutionary conserved transmembrane proteins that
localise to neurons, that are critical for neuronal
function, and that interact with the beta subunits,
beta1 in vertebrates and beta in Drosophila, of
Na,K-ATPase. NKAINs have highly conserved
trans-membrane domains but otherwise no other
characterized domains. NKAINs may function as subunits
of pore or channel structures in neurons or they may
affect the function of other membrane proteins. They
are likely to function within the membrane bilayer.
Length = 186
Score = 28.1 bits (63), Expect = 5.5
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 32 VFFFTAFMF---LVYFAPIIAIILRMFSVHHCRKATSFLFGLWLALW 75
VF F + + L F II +IL +F R + +WLALW
Sbjct: 26 VFDFLGYQWAPILANFLHIIFVILGLFGTIQYRPRYLITYAVWLALW 72
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.330 0.142 0.461
Gapped
Lambda K H
0.267 0.0707 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 19,895,721
Number of extensions: 1950146
Number of successful extensions: 3282
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3238
Number of HSP's successfully gapped: 87
Length of query: 382
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 283
Effective length of database: 6,546,556
Effective search space: 1852675348
Effective search space used: 1852675348
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 60 (26.9 bits)