BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 016833
         (382 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1
          Length = 248

 Score =  179 bits (454), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 133/227 (58%), Gaps = 2/227 (0%)

Query: 84  EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRH 143
           +D+ H +  SLE+LY G + KL+L++ ++                     G G+K   R 
Sbjct: 12  KDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQ 71

Query: 144 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203
           +GP MIQ+ Q  C+ C GTG+ I+ KDRC  C G+KV  E+K+LEV VE GM++GQ+I F
Sbjct: 72  MGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVF 130

Query: 204 PGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQ 263
            GEAD+APD + GD+VF++ ++ H  FKR GDDL  E  + L  A+ G +F + H+ G  
Sbjct: 131 KGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDW 190

Query: 264 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES 310
           L +   PGEV+ P   K I  +GMP+ +     G L I FT+  PE+
Sbjct: 191 LKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGY-GNLIIKFTIKDPEN 236


>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding
           Domain Complexed With A C-Terminal Peptide Of Hsp70
 pdb|3AGZ|B Chain B, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding
           Domain Complexed With A C-Terminal Peptide Of Hsp70
          Length = 190

 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 108/239 (45%), Gaps = 63/239 (26%)

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLG 145
           V H L+VSLE++Y+G +KK                                MK+S + L 
Sbjct: 14  VTHDLRVSLEEIYSGCTKK--------------------------------MKISHKRLN 41

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           P                              G+ +  E K+L + V+KG + G KITFP 
Sbjct: 42  PD-----------------------------GKSIRNEDKILTIEVKKGWKEGTKITFPK 72

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + 
Sbjct: 73  EGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIP 132

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324
           +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct: 133 VVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 189


>pdb|2QLD|A Chain A, Human Hsp40 Hdj1
          Length = 183

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 108/239 (45%), Gaps = 63/239 (26%)

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLG 145
           V H L+VSLE++Y+G +KK                                MK+S + L 
Sbjct: 7   VTHDLRVSLEEIYSGCTKK--------------------------------MKISHKRLN 34

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           P                              G+ +  E K+L + V+KG + G KITFP 
Sbjct: 35  PD-----------------------------GKSIRNEDKILTIEVKKGWKEGTKITFPK 65

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + 
Sbjct: 66  EGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIP 125

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324
           +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct: 126 VVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 182


>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding
           Domain
 pdb|3AGX|B Chain B, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding
           Domain
 pdb|3AGY|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding
           Domain Complexed With A C-Terminal Peptide Of Hsp70
 pdb|3AGY|B Chain B, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding
           Domain Complexed With A C-Terminal Peptide Of Hsp70
          Length = 181

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 108/239 (45%), Gaps = 63/239 (26%)

Query: 86  VIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLG 145
           V H L+VSLE++Y+G +KK                                MK+S + L 
Sbjct: 5   VTHDLRVSLEEIYSGCTKK--------------------------------MKISHKRLN 32

Query: 146 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 205
           P                              G+ +  E K+L + V+KG + G KITFP 
Sbjct: 33  PD-----------------------------GKSIRNEDKILTIEVKKGWKEGTKITFPK 63

Query: 206 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLL 265
           E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + 
Sbjct: 64  EGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIP 123

Query: 266 IKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324
           +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct: 124 VVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 180


>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From
           Cryptosporidium Parvum, Cgd2_1800
 pdb|2Q2G|B Chain B, Crystal Structure Of Dimerization Domain Of Hsp40 From
           Cryptosporidium Parvum, Cgd2_1800
          Length = 180

 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 3/146 (2%)

Query: 179 KVIQEKKVLEVIVEKGMQNGQKITFPGEAD-EAPDTVTGDIVFVLQQKEHPKFKRKGDDL 237
           KV  E+ ++EV ++ G ++G K+T+ GE D E+P T  GD+V ++Q K HP+F R    L
Sbjct: 36  KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHL 95

Query: 238 FVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRG 297
             + T+ L  AL GF   +T LD R L I  +  E+V P   K + +EG P+  +P  +G
Sbjct: 96  IXKVTIPLVRALTGFTCPVTTLDNRNLQIPIK--EIVNPKTRKIVPNEGXPIKNQPGQKG 153

Query: 298 KLYIHFTVDFPESLSPDQCKMLETVL 323
            L + F + FP+SL+P+Q K+++  L
Sbjct: 154 DLILEFDICFPKSLTPEQKKLIKEAL 179


>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1
          Length = 170

 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 176 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIV-FVLQQKEHPKFKRKG 234
           KG     EK  +++ ++ G + G KIT+  + D  P T     + FV+Q+K HP FKR G
Sbjct: 27  KGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDG 86

Query: 235 DDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRP 293
           DDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P
Sbjct: 87  DDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNP 143

Query: 294 FMRGKLYIHFTVDFPESLSPDQCKMLE 320
             RG L + + VD+P SL+  Q + ++
Sbjct: 144 SQRGNLIVKYKVDYPISLNDAQKRAID 170


>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast
           Hsp40 Sis1 And Hsp70 Ssa1
 pdb|2B26|B Chain B, The Crystal Structure Of The Protein Complex Of Yeast
           Hsp40 Sis1 And Hsp70 Ssa1
 pdb|2B26|C Chain C, The Crystal Structure Of The Protein Complex Of Yeast
           Hsp40 Sis1 And Hsp70 Ssa1
          Length = 173

 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 176 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIV-FVLQQKEHPKFKRKG 234
           KG     EK  +++ ++ G + G KIT+  + D  P T     + FV+Q+K HP FKR G
Sbjct: 27  KGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDG 86

Query: 235 DDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRP 293
           DDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P
Sbjct: 87  DDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNP 143

Query: 294 FMRGKLYIHFTVDFPESLSPDQCKMLE 320
             RG L + + VD+P SL+  Q + ++
Sbjct: 144 SQRGNLIVKYKVDYPISLNDAQKRAID 170


>pdb|1XAO|A Chain A, Hsp40-Ydj1 Dimerization Domain
 pdb|1XAO|B Chain B, Hsp40-Ydj1 Dimerization Domain
          Length = 121

 Score = 71.6 bits (174), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 230 FKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPM 289
           FKR GDDL  E  + L  A+ G +F + H+ G  L +   PGEV+ P   K I  +GMP+
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 290 YQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQL-TDMELDEC 339
             +    G L I FT+ FPE+   S +  K LE +LPPR    +     +DEC
Sbjct: 62  -PKYGGYGNLIIKFTIKFPENHFTSEENLKKLEEILPPRIVPAIPKKATVDEC 113


>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr
          Length = 77

 Score = 35.0 bits (79), Expect = 0.063,   Method: Composition-based stats.
 Identities = 15/20 (75%), Positives = 18/20 (90%)

Query: 26 VLSDPEKREIYDQYGEDALK 45
          VLSDP KREI+D+YGE+ LK
Sbjct: 54 VLSDPRKREIFDRYGEEGLK 73


>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From
          Saccharomyces Cerevisiae
          Length = 92

 Score = 33.9 bits (76), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 13/20 (65%), Positives = 18/20 (90%)

Query: 26 VLSDPEKREIYDQYGEDALK 45
          +L+DP+KREIYDQYG +A +
Sbjct: 57 ILNDPQKREIYDQYGLEAAR 76


>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella
           Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A
           Resolution.
 pdb|3LZ8|B Chain B, Structure Of A Putative Chaperone Dnaj From Klebsiella
           Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A
           Resolution
          Length = 329

 Score = 32.7 bits (73), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 185 KVLEVIVEKGMQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPKFKRKGDDLFVEHTL 243
           K L V +  G+ +GQ+I   G+     +    GD+  V+    HP F   G +L +   L
Sbjct: 181 KTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPL 240

Query: 244 SLTEALCGFQFVITHLDGRQLLIKSQPG 271
           +  EA  G +  +  L    +L+   PG
Sbjct: 241 APWEAALGAKVTVPTLK-ESILLTVPPG 267


>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a
          Length = 99

 Score = 32.0 bits (71), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 7  KKSDNTKYYE--ILGVSKKRFVLSDPEKREIYDQYGEDAL 44
          K  DN ++ E     V++   VLSD  KREIYD+YG + L
Sbjct: 34 KNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73


>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
           Ruthenium Organometallic Ligand Ru1
 pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
           Ruthenium Organometallic Ligand Ru1
          Length = 312

 Score = 31.2 bits (69), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 14/104 (13%)

Query: 257 THLDGRQLLIKSQPGEVVKPDQFKA----INDEGMPMYQR-----PFMRGKLYIHFTVDF 307
           T  DG ++     P E +   Q+ A    +   G+ +Y       PF R +  +   + F
Sbjct: 196 TDFDGTRVY---SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHF 252

Query: 308 PESLSPDQCKMLETVLPPRTSVQ--LTDMELDECEETTLHDVNI 349
           P  +SPD C ++   L P+ S +  L ++ LD   +T   DV +
Sbjct: 253 PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPL 296


>pdb|1Y9I|A Chain A, Crystal Structure Of Low Temperature Requirement C Protein
           From Listeria Monocytogenes
 pdb|1Y9I|B Chain B, Crystal Structure Of Low Temperature Requirement C Protein
           From Listeria Monocytogenes
 pdb|1Y9I|C Chain C, Crystal Structure Of Low Temperature Requirement C Protein
           From Listeria Monocytogenes
 pdb|1Y9I|D Chain D, Crystal Structure Of Low Temperature Requirement C Protein
           From Listeria Monocytogenes
          Length = 178

 Score = 31.2 bits (69), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 216 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVK 275
            ++V  LQQK HP  +       VEH L   E           L G QL + ++ GE+V+
Sbjct: 29  AELVLFLQQKYHPGLELDICRQNVEHVLRKREVQNAV------LTGIQLDVXAEKGELVQ 82

Query: 276 PDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 317
           P Q     DEG+           + ++ ++ F      D+ K
Sbjct: 83  PLQNIISADEGLYGVDEILALSIVNVYGSIGFTNYGYIDKVK 124


>pdb|3MDZ|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Vii [isoform
           1], Ca7
          Length = 281

 Score = 30.8 bits (68), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 196 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFV 239
            N +K +  GEA  APD +    VF+    EHP   R  D L++
Sbjct: 144 WNAKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYM 187


>pdb|3ML5|A Chain A, Crystal Structure Of The C183sC217S MUTANT OF HUMAN CA VII
           IN COMPLEX With Acetazolamide
          Length = 269

 Score = 30.8 bits (68), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 196 QNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFV 239
            N +K +  GEA  APD +    VF+    EHP   R  D L++
Sbjct: 130 WNAKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYM 173


>pdb|2VMK|A Chain A, Crystal Structure Of E. Coli Rnase E Apoprotein -
           Catalytic Domain
 pdb|2VMK|B Chain B, Crystal Structure Of E. Coli Rnase E Apoprotein -
           Catalytic Domain
 pdb|2VMK|C Chain C, Crystal Structure Of E. Coli Rnase E Apoprotein -
           Catalytic Domain
 pdb|2VMK|D Chain D, Crystal Structure Of E. Coli Rnase E Apoprotein -
           Catalytic Domain
          Length = 515

 Score = 28.1 bits (61), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 137 MKVSIRHLGPSMIQQMQHPCNECKGTGETINDKD 170
           +++S + L PS+ +   H C  C GTG T+ D +
Sbjct: 385 LEMSRQRLSPSLGESSHHVCPRCSGTG-TVRDNE 417


>pdb|2VRT|A Chain A, Crystal Structure Of E. Coli Rnase E Possessing M1 Rna
           Fragments - Catalytic Domain
 pdb|2VRT|B Chain B, Crystal Structure Of E. Coli Rnase E Possessing M1 Rna
           Fragments - Catalytic Domain
 pdb|2VRT|C Chain C, Crystal Structure Of E. Coli Rnase E Possessing M1 Rna
           Fragments - Catalytic Domain
 pdb|2VRT|D Chain D, Crystal Structure Of E. Coli Rnase E Possessing M1 Rna
           Fragments - Catalytic Domain
          Length = 509

 Score = 28.1 bits (61), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 137 MKVSIRHLGPSMIQQMQHPCNECKGTGETINDKD 170
           +++S + L PS+ +   H C  C GTG T+ D +
Sbjct: 385 LEMSRQRLSPSLGESSHHVCPRCSGTG-TVRDNE 417


>pdb|2BX2|L Chain L, Catalytic Domain Of E. Coli Rnase E
 pdb|2C0B|L Chain L, Catalytic Domain Of E. Coli Rnase E In Complex With 13-Mer
           Rna
 pdb|2C4R|L Chain L, Catalytic Domain Of E. Coli Rnase E
          Length = 517

 Score = 28.1 bits (61), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 137 MKVSIRHLGPSMIQQMQHPCNECKGTGETINDKD 170
           +++S + L PS+ +   H C  C GTG T+ D +
Sbjct: 392 LEMSRQRLSPSLGESSHHVCPRCSGTG-TVRDNE 424


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.317    0.136    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,660,496
Number of Sequences: 62578
Number of extensions: 348902
Number of successful extensions: 865
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 830
Number of HSP's gapped (non-prelim): 29
length of query: 382
length of database: 14,973,337
effective HSP length: 101
effective length of query: 281
effective length of database: 8,652,959
effective search space: 2431481479
effective search space used: 2431481479
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)