Query 016833
Match_columns 382
No_of_seqs 360 out of 2360
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 04:32:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016833.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016833hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nlt_A Protein YDJ1, mitochond 100.0 1.6E-65 5.5E-70 483.2 23.1 240 79-320 7-248 (248)
2 3lz8_A Putative chaperone DNAJ 100.0 1.8E-55 6.2E-60 429.7 19.7 247 8-324 24-315 (329)
3 3agx_A DNAJ homolog subfamily 100.0 4.4E-48 1.5E-52 348.0 19.1 180 83-325 2-181 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 2.3E-46 7.9E-51 336.5 20.8 178 82-324 2-180 (180)
5 1c3g_A Heat shock protein 40; 100.0 7.3E-43 2.5E-47 311.0 15.8 169 84-320 1-170 (170)
6 1xao_A YDJ1, mitochondrial pro 100.0 3.7E-29 1.3E-33 210.4 12.6 118 229-349 1-120 (121)
7 3i38_A Putative chaperone DNAJ 99.9 1.5E-26 5.1E-31 190.9 9.3 95 225-325 2-96 (109)
8 2ctt_A DNAJ homolog subfamily 99.8 3.1E-22 1.1E-26 163.7 3.8 102 83-191 1-103 (104)
9 1exk_A DNAJ protein; extended 99.5 1.9E-14 6.4E-19 111.4 5.3 77 100-183 1-78 (79)
10 1nlt_A Protein YDJ1, mitochond 99.2 1.4E-11 4.9E-16 115.3 7.3 129 96-237 42-246 (248)
11 1bq0_A DNAJ, HSP40; chaperone, 99.0 3.3E-11 1.1E-15 97.8 1.0 57 11-67 2-99 (103)
12 3i38_A Putative chaperone DNAJ 98.8 2.2E-09 7.4E-14 88.0 4.9 51 187-238 40-90 (109)
13 2o37_A Protein SIS1; HSP40, J- 98.8 9.1E-10 3.1E-14 87.4 0.8 43 5-47 1-78 (92)
14 2och_A Hypothetical protein DN 98.7 1.1E-09 3.6E-14 83.2 -0.6 38 5-42 1-73 (73)
15 1hdj_A Human HSP40, HDJ-1; mol 98.7 2.8E-09 9.6E-14 81.6 0.1 36 11-46 2-74 (77)
16 1xao_A YDJ1, mitochondrial pro 98.7 2.2E-08 7.5E-13 83.5 5.4 52 186-237 35-91 (121)
17 2ctr_A DNAJ homolog subfamily 98.5 1.8E-08 6.3E-13 79.1 1.3 38 10-47 5-79 (88)
18 2ej7_A HCG3 gene; HCG3 protein 98.5 1.3E-08 4.4E-13 78.8 -0.0 37 8-44 5-80 (82)
19 1c3g_A Heat shock protein 40; 98.5 2.8E-07 9.4E-12 81.3 7.5 72 236-310 2-81 (170)
20 2q2g_A HSP40 protein, heat sho 98.4 3.1E-07 1.1E-11 81.7 7.2 74 234-311 3-88 (180)
21 2dmx_A DNAJ homolog subfamily 98.4 2.9E-08 9.8E-13 78.6 0.3 38 9-46 6-82 (92)
22 2ctp_A DNAJ homolog subfamily 98.4 2.6E-08 8.8E-13 76.4 -0.8 35 9-43 4-75 (78)
23 3lz8_A Putative chaperone DNAJ 98.4 3.4E-07 1.2E-11 88.9 6.6 77 231-310 137-226 (329)
24 2dn9_A DNAJ homolog subfamily 98.4 2.6E-08 9.1E-13 76.5 -1.1 35 9-43 4-76 (79)
25 2ctq_A DNAJ homolog subfamily 98.4 3E-08 1E-12 81.5 -1.0 38 8-45 16-91 (112)
26 3agx_A DNAJ homolog subfamily 98.3 1.2E-06 4.1E-11 77.9 8.8 75 234-312 2-89 (181)
27 2ctw_A DNAJ homolog subfamily 98.3 8.1E-08 2.8E-12 78.5 0.7 38 8-45 13-88 (109)
28 2lgw_A DNAJ homolog subfamily 98.3 3E-08 1E-12 79.7 -1.9 35 12-46 2-75 (99)
29 2yua_A Williams-beuren syndrom 98.3 1.8E-07 6.3E-12 75.0 2.1 39 8-46 13-91 (99)
30 3apq_A DNAJ homolog subfamily 98.3 9.4E-08 3.2E-12 86.2 0.1 52 12-66 2-91 (210)
31 2cug_A Mkiaa0962 protein; DNAJ 98.3 6.5E-08 2.2E-12 75.9 -0.9 35 8-42 13-84 (88)
32 1wjz_A 1700030A21RIK protein; 98.1 4.8E-07 1.6E-11 71.6 0.1 33 8-40 12-88 (94)
33 3apo_A DNAJ homolog subfamily 98.0 8.2E-07 2.8E-11 95.3 -0.9 40 8-47 17-94 (780)
34 2ctt_A DNAJ homolog subfamily 97.9 4.9E-06 1.7E-10 67.2 3.1 60 96-169 32-97 (104)
35 2pf4_E Small T antigen; PP2A, 97.9 6.5E-07 2.2E-11 79.0 -2.8 33 9-41 8-76 (174)
36 1exk_A DNAJ protein; extended 97.9 4.7E-06 1.6E-10 63.7 2.2 57 96-166 15-77 (79)
37 2qsa_A DNAJ homolog DNJ-2; J-d 97.8 1.8E-06 6E-11 70.4 -1.0 34 8-41 11-86 (109)
38 2l6l_A DNAJ homolog subfamily 97.8 2.7E-06 9.3E-11 73.6 -0.2 33 9-41 7-83 (155)
39 3lcz_A YCZA, inhibitor of trap 97.8 4.7E-06 1.6E-10 58.9 0.8 33 150-184 6-38 (53)
40 1gh6_A Large T antigen; tumor 97.6 5E-06 1.7E-10 68.4 -1.0 31 11-41 7-73 (114)
41 3pmq_A Decaheme cytochrome C M 97.6 8.4E-07 2.9E-11 93.1 -7.6 78 87-164 168-257 (669)
42 3hho_A CO-chaperone protein HS 97.4 1.6E-05 5.6E-10 70.1 -1.1 15 24-38 60-75 (174)
43 3bvo_A CO-chaperone protein HS 97.2 4.2E-05 1.5E-09 69.3 -0.9 15 24-38 99-114 (207)
44 1fpo_A HSC20, chaperone protei 97.1 3.7E-05 1.3E-09 67.6 -1.6 16 24-39 57-73 (171)
45 3lcz_A YCZA, inhibitor of trap 96.9 0.00036 1.2E-08 49.2 1.9 28 110-139 9-36 (53)
46 2bx9_A Anti-trap, AT, tryptoph 96.9 0.00038 1.3E-08 49.1 1.8 28 110-139 9-36 (53)
47 2bx9_A Anti-trap, AT, tryptoph 96.8 0.00071 2.4E-08 47.6 3.1 28 127-167 10-37 (53)
48 2ys8_A RAB-related GTP-binding 96.6 0.00018 6E-09 56.4 -1.7 16 8-23 23-38 (90)
49 1faf_A Large T antigen; J doma 96.6 0.00015 5.1E-09 55.5 -2.1 32 11-43 10-77 (79)
50 3uo3_A J-type CO-chaperone JAC 96.2 0.00062 2.1E-08 60.3 -0.7 16 24-39 64-80 (181)
51 2guz_A Mitochondrial import in 93.5 0.0099 3.4E-07 44.1 -0.8 15 9-23 11-26 (71)
52 1iur_A KIAA0730 protein; DNAJ 91.7 0.011 3.8E-07 45.9 -2.7 15 9-23 13-27 (88)
53 1ltl_A DNA replication initiat 45.5 67 0.0023 29.4 8.2 33 127-164 135-167 (279)
54 3jt0_A Lamin-B1; structural ge 43.6 33 0.0011 28.7 5.1 52 248-302 51-102 (144)
55 1ltl_A DNA replication initiat 37.2 40 0.0014 31.0 5.2 14 311-324 256-269 (279)
56 2lll_A Lamin-B2; immunoglobuli 36.6 90 0.0031 25.7 6.7 39 248-287 47-86 (139)
57 2bx2_L Ribonuclease E, RNAse E 35.4 11 0.00037 38.3 1.0 32 136-167 390-422 (517)
58 2vl6_A SSO MCM N-TER, minichro 32.1 1.1E+02 0.0038 27.6 7.4 63 153-222 168-234 (268)
59 3pmq_A Decaheme cytochrome C M 28.3 8.8 0.0003 40.2 -1.1 29 127-162 192-220 (669)
60 3hn9_A Lamin-B1; structural ge 28.0 96 0.0033 24.9 5.4 39 248-287 38-76 (123)
61 2vf7_A UVRA2, excinuclease ABC 27.8 21 0.00073 38.4 1.8 33 128-164 640-672 (842)
62 2qwo_B Putative tyrosine-prote 26.6 10 0.00035 29.3 -0.8 12 12-23 33-44 (92)
63 1ifr_A Lamin A/C; immunoglobul 25.5 1.4E+02 0.0047 23.9 5.9 51 248-301 32-83 (121)
64 1mli_A Muconolactone isomerase 25.2 72 0.0025 24.7 3.9 23 299-321 3-25 (96)
65 3vdz_A Ubiquitin-40S ribosomal 25.0 56 0.0019 25.4 3.4 40 233-272 14-56 (111)
66 1gmu_A UREE; metallochaperone; 24.7 1.3E+02 0.0046 24.7 5.8 45 239-284 16-60 (143)
67 1sif_A Ubiquitin; hydrophobic 24.4 65 0.0022 23.7 3.5 25 248-272 6-30 (88)
68 3nyb_B Protein AIR2; polya RNA 24.1 37 0.0013 25.5 2.0 54 109-167 4-60 (83)
69 2r6f_A Excinuclease ABC subuni 23.8 34 0.0011 37.5 2.4 33 128-164 755-787 (972)
70 2qkd_A Zinc finger protein ZPR 23.6 36 0.0012 33.4 2.3 36 127-162 13-50 (404)
71 2dgy_A MGC11102 protein; EIF-1 23.3 2.7E+02 0.0094 21.9 7.4 62 248-322 24-90 (111)
72 1n4c_A Auxilin; four helix bun 22.5 10 0.00034 33.1 -1.7 12 12-23 117-128 (182)
73 1ear_A Urease accessory protei 21.5 1.4E+02 0.0049 24.6 5.5 44 240-284 22-65 (147)
74 1ufg_A Lamin A, nuclear lamin; 20.2 2.1E+02 0.0071 23.9 6.1 51 248-301 63-114 (151)
75 1msz_A DNA-binding protein smu 20.2 51 0.0017 25.0 2.1 21 304-324 35-55 (86)
No 1
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.6e-65 Score=483.19 Aligned_cols=240 Identities=45% Similarity=0.868 Sum_probs=220.3
Q ss_pred cccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCC
Q 016833 79 RQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNE 158 (382)
Q Consensus 79 ~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~ 158 (382)
+++++.|+.++|.|||||+|+|+++++.+++.+.|+.|+|+|++.++..+|+.|+|+|+++..+++|| |+++++.+|+.
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~ 85 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV 85 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence 45679999999999999999999999999999999999999999888789999999999999999999 99999999999
Q ss_pred CcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccce
Q 016833 159 CKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF 238 (382)
Q Consensus 159 C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~ 238 (382)
|+|+|+++..+++|+.|+|.|++.+.++|+|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|||
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence 99999999878999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred eeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCC--CCHHHH
Q 016833 239 VEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQC 316 (382)
Q Consensus 239 ~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~--l~~~~~ 316 (382)
++++|||+|||+|+++.|+||||+.+.|++|||++++||++++|+|+|||..+++ .+|||||+|+|+||++ ||++|+
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~ 244 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL 244 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence 9999999999999999999999988999999999999999999999999987555 6899999999999999 999999
Q ss_pred HHHH
Q 016833 317 KMLE 320 (382)
Q Consensus 317 ~~l~ 320 (382)
++|+
T Consensus 245 ~~l~ 248 (248)
T 1nlt_A 245 KKLE 248 (248)
T ss_dssp ----
T ss_pred HhhC
Confidence 8875
No 2
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=1.8e-55 Score=429.66 Aligned_cols=247 Identities=25% Similarity=0.382 Sum_probs=158.6
Q ss_pred CCCCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCCC--
Q 016833 8 KSDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEGM-- 48 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~-- 48 (382)
.+..+|||+||||+++ || |||||+||+.||+|+..+...++
T Consensus 24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~ 103 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR 103 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccc
Confidence 3456899999999998 99 99999999999999544321111
Q ss_pred --C---CCCCCCCchhhhhcccCCCCCCCCCCCCccccCCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccC
Q 016833 49 --G---GGGGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKS 123 (382)
Q Consensus 49 --~---~~~~~~~~~d~F~~~Fggg~f~g~~~~~~~~~kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~ 123 (382)
+ ++.++.+++|||++|||++++ + ++.+.++++.|+.++|.|||+|+|+|+++++.+++.+.| |.
T Consensus 104 ~~~~~~~~f~~~~f~diF~~~Fg~~g~--~-~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~----g~---- 172 (329)
T 3lz8_A 104 QRQTHEQSYSQQDFDDIFSSMFGQQAH--Q-RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN----VF---- 172 (329)
T ss_dssp ------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC----SC----
T ss_pred ccccccCCcCCCchhhhhHhhhcCcCC--C-CCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec----CC----
Confidence 0 111123578999999985321 1 112335689999999999999999999999999886532 11
Q ss_pred CCcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEe
Q 016833 124 GASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 203 (382)
Q Consensus 124 ~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~ 203 (382)
|.+ .+...++++|+||||+++|++|+|
T Consensus 173 ------------G~v-----------------------------------------~~~~~~~l~V~IP~Gv~~G~~Irl 199 (329)
T 3lz8_A 173 ------------GMI-----------------------------------------ESETPKTLNVKIPAGVVDGQRIRL 199 (329)
T ss_dssp ------------C-C-----------------------------------------CEEEEEEEEEEECTTCCTTCEEEE
T ss_pred ------------eEE-----------------------------------------EEecceEEEEeCCCCCCCCCEEEE
Confidence 110 123356899999999999999999
Q ss_pred CCCCCCCC-CCCCccEEEEEEEecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEE
Q 016833 204 PGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAI 282 (382)
Q Consensus 204 ~geG~~~~-g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i 282 (382)
+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|+|+|||||+++.|+||||+ +.|+||+| ++||++++|
T Consensus 200 ~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~g--t~~g~~~rl 276 (329)
T 3lz8_A 200 KGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRI 276 (329)
T ss_dssp SSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEE
T ss_pred cccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCC--CCCCCEEEE
Confidence 99999864 678999999999999999999999999999999999999999999999998 69999999 699999999
Q ss_pred cCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHhCC
Q 016833 283 NDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 324 (382)
Q Consensus 283 ~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~lp 324 (382)
+|+|||.. ..+|||||+|+|+||++||++|+++|+++..
T Consensus 277 ~G~GmP~~---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 277 KGKGLVSK---THTGDLFAVIKIVMPTKPDEKARELWQQLAA 315 (329)
T ss_dssp TTCSCBCS---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCC---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999975 3699999999999999999999999999875
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=4.4e-48 Score=347.96 Aligned_cols=180 Identities=39% Similarity=0.681 Sum_probs=160.9
Q ss_pred CceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcce
Q 016833 83 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 162 (382)
Q Consensus 83 g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 162 (382)
++|+.++|.|||||+|+|+++++.+++
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~----------------------------------------------------- 28 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH----------------------------------------------------- 28 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence 468899999999999999999987653
Q ss_pred eEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccceeeec
Q 016833 163 GETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT 242 (382)
Q Consensus 163 G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~ 242 (382)
.|..|+|++++.+.++++|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus 29 --------~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~ 100 (181)
T 3agx_A 29 --------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPAR 100 (181)
T ss_dssp --------EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred --------ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEE
Confidence 133344444556789999999999999999999999999888999999999999999999999999999999
Q ss_pred cCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHh
Q 016833 243 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV 322 (382)
Q Consensus 243 I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~ 322 (382)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..+++..+|||||+|+|.||++||++|+++|+++
T Consensus 101 Isl~eAllG~~i~v~tldG~~~~i~i~~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~ 178 (181)
T 3agx_A 101 ISLREALCGCTVNVPTLDGRTIPVVFKDV--IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQV 178 (181)
T ss_dssp EEHHHHHHCEEEEEECTTSCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHH
T ss_pred cCHHHHhCCCEEEeECCCCCEEEEECCCc--cCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHh
Confidence 99999999999999999999899999987 7999999999999998765667999999999999999999999999999
Q ss_pred CCC
Q 016833 323 LPP 325 (382)
Q Consensus 323 lp~ 325 (382)
||+
T Consensus 179 ~~~ 181 (181)
T 3agx_A 179 LPI 181 (181)
T ss_dssp SCC
T ss_pred ccC
Confidence 963
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-46 Score=336.53 Aligned_cols=178 Identities=37% Similarity=0.659 Sum_probs=164.7
Q ss_pred CCceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCcc
Q 016833 82 RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG 161 (382)
Q Consensus 82 kg~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G 161 (382)
++.|+.++|.|||||+|+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 3789999999999999999999999999888731
Q ss_pred eeEEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCC-CCCCCCccEEEEEEEecCCccccccccceee
Q 016833 162 TGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVE 240 (382)
Q Consensus 162 ~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~-~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~ 240 (382)
+++.+.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++
T Consensus 36 -----------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~ 98 (180)
T 2q2g_A 36 -----------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMK 98 (180)
T ss_dssp -----------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEE
T ss_pred -----------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEE
Confidence 2455678999999999999999999999999 7899999999999999999999999999999
Q ss_pred eccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Q 016833 241 HTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 320 (382)
Q Consensus 241 ~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~ 320 (382)
++|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|+||++||++|+++|+
T Consensus 99 ~~Isl~eAllG~~i~v~tldG~~v~i~ip~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 176 (180)
T 2q2g_A 99 VTIPLVRALTGFTCPVTTLDNRNLQIPIKEI--VNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIK 176 (180)
T ss_dssp EEEEHHHHHHCEEEEEECTTCCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHH
T ss_pred EEcCHHHHhCCCEEEeeCCCCCEEEEECCCc--cCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHH
Confidence 9999999999999999999999899999987 89999999999999987666679999999999999999999999999
Q ss_pred HhCC
Q 016833 321 TVLP 324 (382)
Q Consensus 321 ~~lp 324 (382)
++||
T Consensus 177 ~~~p 180 (180)
T 2q2g_A 177 EALD 180 (180)
T ss_dssp HHC-
T ss_pred HhcC
Confidence 9985
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=7.3e-43 Score=311.01 Aligned_cols=169 Identities=36% Similarity=0.582 Sum_probs=153.6
Q ss_pred ceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCcccCCCCCcccEEEEEEecCCccceeecccCCCCccee
Q 016833 84 EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTG 163 (382)
Q Consensus 84 ~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 163 (382)
+|+.++|.|||||+|+|+++++++++.. + .
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~------------------~---------------------------- 30 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P------------------H---------------------------- 30 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE----T------------------T----------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec----C------------------C----------------------------
Confidence 4789999999999999999999988651 0 0
Q ss_pred EEecCCCCCCCCCCceEEEeceEEEEEeccCCCCCCEEEeCCCCCC-CCCCCCccEEEEEEEecCCccccccccceeeec
Q 016833 164 ETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT 242 (382)
Q Consensus 164 ~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~G~~~g~~i~~~geG~~-~~g~~~GDl~v~i~~k~h~~F~R~g~DL~~~~~ 242 (382)
|.+ +.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus 31 ---------------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~ 94 (170)
T 1c3g_A 31 ---------------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP 94 (170)
T ss_dssp ---------------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEEC
T ss_pred ---------------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEE
Confidence 112 568899999999999999999999995 678899999999999999999999999999999
Q ss_pred cCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Q 016833 243 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 320 (382)
Q Consensus 243 I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~ 320 (382)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+
T Consensus 95 Isl~eAllG~~~~v~tldG~~~~i~i~~~--t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 95 LSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp CBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred cCHHHHhCCCeEEeeCCCCCEEEEECCCc--cCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 99999999999999999998889999988 79999999999999987666678999999999999999999988763
No 6
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.7e-29 Score=210.38 Aligned_cols=118 Identities=37% Similarity=0.601 Sum_probs=101.2
Q ss_pred ccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECC
Q 016833 229 KFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP 308 (382)
Q Consensus 229 ~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P 308 (382)
.|+|+|+||+++++|+|+|||+|+++.|+||||+.+.|++|||++++||++++|+|+|||..+++ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 49999999999999999999999999999999998999999999999999999999999987555 68999999999999
Q ss_pred CC--CCHHHHHHHHHhCCCCCCCCCccCcccccceeeeecCCh
Q 016833 309 ES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNI 349 (382)
Q Consensus 309 ~~--l~~~~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (382)
++ |+++|+++|+++++.+.. . .....+++|++.+.++++
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~~~-~-~~~~~~~~ee~~~~~~~~ 120 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPRIV-P-AIPKKATVDECVLADFDP 120 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCCCC-C-CCCTTSCEEEEECEECCC
T ss_pred CCCCCCHHHHHHHHHHcccccc-c-CCCCCCCceEEEeeccCC
Confidence 99 999999999999987642 1 123446778888888875
No 7
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=1.5e-26 Score=190.88 Aligned_cols=95 Identities=20% Similarity=0.332 Sum_probs=88.1
Q ss_pred ecCCccccccccceeeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEE
Q 016833 225 KEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFT 304 (382)
Q Consensus 225 k~h~~F~R~g~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~ 304 (382)
++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|++|+| ++||++++|+|+|||.. + .+|||||+|+
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g--~~~G~~~rl~G~G~p~~-~--~~GDL~v~~~ 75 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK-T--HTGDLFAVIK 75 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS-S--CBCCEEEEEE
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCC--cCcCeEEEECCccCCCC-C--CCcCEEEEEE
Confidence 68999999999999999999999999999999999995 89999999 89999999999999973 2 6999999999
Q ss_pred EECCCCCCHHHHHHHHHhCCC
Q 016833 305 VDFPESLSPDQCKMLETVLPP 325 (382)
Q Consensus 305 V~~P~~l~~~~~~~l~~~lp~ 325 (382)
|+||++||++|+++|++++..
T Consensus 76 V~~P~~Ls~~q~~~l~~l~~~ 96 (109)
T 3i38_A 76 IVMPTKPDEKARELWQQLAAA 96 (109)
T ss_dssp ECCCSSCCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999853
No 8
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=3.1e-22 Score=163.72 Aligned_cols=102 Identities=27% Similarity=0.609 Sum_probs=90.6
Q ss_pred CceeEeccccccccccCcceeEEeeceeeeCCCCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcc
Q 016833 83 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG 161 (382)
Q Consensus 83 g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G 161 (382)
+.|+.++|.|||||+|+|++++|.+++.+.|+.|+|+|+++++. .+|+.|+|+|++...+ |+ + +++.+|+.|+|
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~--G~--~-~~~~~C~~C~G 75 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT--GP--F-VMRSTCRRCGG 75 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE--TT--E-EEEEECSSSSS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe--CC--E-EEEEECCcCCC
Confidence 35788999999999999999999999999999999999998865 7999999999876543 54 3 35789999999
Q ss_pred eeEEecCCCCCCCCCCceEEEeceEEEEEe
Q 016833 162 TGETINDKDRCPQCKGEKVIQEKKVLEVIV 191 (382)
Q Consensus 162 ~G~~~~~k~~C~~C~G~g~~~~~~~l~V~I 191 (382)
+|+++. ++|+.|+|.|++.++++|+|+|
T Consensus 76 ~G~~i~--~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 76 RGSIII--SPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSEECS--SCCSSSSSCSEECCCCSSCCSC
T ss_pred cceECC--CcCCCCCCeeEEEEEEEEEEEc
Confidence 999986 8999999999999999988865
No 9
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.49 E-value=1.9e-14 Score=111.36 Aligned_cols=77 Identities=30% Similarity=0.758 Sum_probs=66.0
Q ss_pred cceeEEeeceeeeCCCCCCCCccCCCc-ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCCCCCCCCCCc
Q 016833 100 GTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGE 178 (382)
Q Consensus 100 G~~~~i~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k~~C~~C~G~ 178 (382)
|++++|.+++.+.|+.|+|+|...... .+|+.|+|+|.++..+ |++ +++.+|+.|+|+|+++. ++|+.|+|.
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~ 73 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFF-AVQQTCPHCQGRGTLIK--DPCNKCHGH 73 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTE-EEEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCC-EEeeECcCCCCccEECC--CcCCCCCCe
Confidence 677889999999999999999887664 7999999999977533 455 46789999999999975 899999999
Q ss_pred eEEEe
Q 016833 179 KVIQE 183 (382)
Q Consensus 179 g~~~~ 183 (382)
|++.+
T Consensus 74 G~~~~ 78 (79)
T 1exk_A 74 GRVER 78 (79)
T ss_dssp SEEEC
T ss_pred EEEee
Confidence 99865
No 10
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.21 E-value=1.4e-11 Score=115.33 Aligned_cols=129 Identities=21% Similarity=0.348 Sum_probs=83.0
Q ss_pred cccCcceeEEeeceeeeCCCCCCCCccC-----C-----CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEE
Q 016833 96 DLYNGTSKKLSLSRNVICTKCKGKGSKS-----G-----ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET 165 (382)
Q Consensus 96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~-----~-----~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~ 165 (382)
..|.|...+- -. ...|+.|+|+|... + ...+|+.|+|+|.++ ....+|+.|+|+|.+
T Consensus 42 ~~C~G~G~~~-g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i-----------~~~~~C~~C~G~g~~ 108 (248)
T 1nlt_A 42 KECEGRGGKK-GA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDII-----------DPKDRCKSCNGKKVE 108 (248)
T ss_dssp TTTTTCSBST-TT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCC-----------CTTSBCSSSTTSCEE
T ss_pred CCCcCccCCC-CC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEe-----------ccCCCCcccCCCceE
Confidence 5567776552 22 37899999999642 1 236899999999754 226789999999976
Q ss_pred ecCCCC-----CCCCC------------------CceEEEe-------------------------------------c-
Q 016833 166 INDKDR-----CPQCK------------------GEKVIQE-------------------------------------K- 184 (382)
Q Consensus 166 ~~~k~~-----C~~C~------------------G~g~~~~-------------------------------------~- 184 (382)
...+.. -..-. |.=++.. .
T Consensus 109 ~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG 188 (248)
T 1nlt_A 109 NERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG 188 (248)
T ss_dssp EEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSS
T ss_pred eeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCC
Confidence 543222 00000 1111110 1
Q ss_pred eEEEEEeccC--CCCCCEEEeCCCCCCCCC-CCCccEEEEEEEecCCc--cccccccc
Q 016833 185 KVLEVIVEKG--MQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPK--FKRKGDDL 237 (382)
Q Consensus 185 ~~l~V~Ip~G--~~~g~~i~~~geG~~~~g-~~~GDl~v~i~~k~h~~--F~R~g~DL 237 (382)
+.++|.||+| +++|++++|+|+|.+..+ ...|||||+|++..+.. +..+...|
T Consensus 189 ~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 4799999999 999999999999998543 26799999999997765 55544433
No 11
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.04 E-value=3.3e-11 Score=97.84 Aligned_cols=57 Identities=54% Similarity=0.941 Sum_probs=34.1
Q ss_pred CcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCCCCC
Q 016833 11 NTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGGGG 52 (382)
Q Consensus 11 ~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~~~ 52 (382)
..+||+||||+++ || ||+||.+|+.||++|++++..+.++++
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~ 81 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 81 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence 5699999999998 99 999999999999999988875321111
Q ss_pred ---CCCCchhhhhcccCC
Q 016833 53 ---GAHDPFDIFQSFFGG 67 (382)
Q Consensus 53 ---~~~~~~d~F~~~Fgg 67 (382)
++.++.++|+.||+.
T Consensus 82 ~~~~~~~~~~~f~~~f~~ 99 (103)
T 1bq0_A 82 GFGGGADFSDIFGDVFGD 99 (103)
T ss_dssp ------------------
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 123566788888863
No 12
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.84 E-value=2.2e-09 Score=87.99 Aligned_cols=51 Identities=25% Similarity=0.371 Sum_probs=42.8
Q ss_pred EEEEeccCCCCCCEEEeCCCCCCCCCCCCccEEEEEEEecCCccccccccce
Q 016833 187 LEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF 238 (382)
Q Consensus 187 l~V~Ip~G~~~g~~i~~~geG~~~~g~~~GDl~v~i~~k~h~~F~R~g~DL~ 238 (382)
++|.||+|+++|++++++|+|++..+ ..|||||+|++..+..+..+...|+
T Consensus 40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~~q~~~l 90 (109)
T 3i38_A 40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDEKARELW 90 (109)
T ss_dssp EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCHHHHHHH
T ss_pred EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCHHHHHHH
Confidence 67999999999999999999998744 7899999999998876665544443
No 13
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=98.78 E-value=9.1e-10 Score=87.43 Aligned_cols=43 Identities=51% Similarity=0.911 Sum_probs=37.4
Q ss_pred CCCCCCCcchhhhcCCCCC----------------------------------ce-eccCccccccccccchhhhhCC
Q 016833 5 APKKSDNTKYYEILGVSKK----------------------------------RF-VLSDPEKREIYDQYGEDALKEG 47 (382)
Q Consensus 5 ~~~~~~~~~~Y~iLgv~~~----------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g 47 (382)
|..|++..+||+||||+++ || ||+||.+|+.||++|++++..+
T Consensus 1 s~~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 1 SNAMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp ---CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred CcccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 3568889999999999998 99 9999999999999999998753
No 14
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=98.72 E-value=1.1e-09 Score=83.17 Aligned_cols=38 Identities=47% Similarity=0.814 Sum_probs=30.3
Q ss_pred CCCCCCCcchhhhcCCCCC----------------------------------ce-eccCccccccccccchh
Q 016833 5 APKKSDNTKYYEILGVSKK----------------------------------RF-VLSDPEKREIYDQYGED 42 (382)
Q Consensus 5 ~~~~~~~~~~Y~iLgv~~~----------------------------------AY-vLsD~~KR~~YD~~G~~ 42 (382)
+..|+...+||+||||+++ || ||+||.+|+.||++|++
T Consensus 1 ~~~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 1 SNAMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp -----CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCcccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 3568889999999999998 99 99999999999999863
No 15
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=98.66 E-value=2.8e-09 Score=81.63 Aligned_cols=36 Identities=53% Similarity=1.054 Sum_probs=33.2
Q ss_pred CcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhC
Q 016833 11 NTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKE 46 (382)
Q Consensus 11 ~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~ 46 (382)
.++||+||||+++ || ||+||.+|+.||++|++++.+
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 5799999999998 99 999999999999999988764
No 16
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.65 E-value=2.2e-08 Score=83.50 Aligned_cols=52 Identities=15% Similarity=0.186 Sum_probs=40.0
Q ss_pred EEEEEeccC--CCCCCEEEeCCCCCCCCCC-CCccEEEEEEEecCCc--cccccccc
Q 016833 186 VLEVIVEKG--MQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPK--FKRKGDDL 237 (382)
Q Consensus 186 ~l~V~Ip~G--~~~g~~i~~~geG~~~~g~-~~GDl~v~i~~k~h~~--F~R~g~DL 237 (382)
.++|+||+| +++|++++++|+|.+..+. ..|||||++++..+.. +..+..+|
T Consensus 35 ~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~ 91 (121)
T 1xao_A 35 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKK 91 (121)
T ss_dssp EEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHH
T ss_pred EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
Confidence 478999999 9999999999999985433 6899999999998776 55554443
No 17
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=1.8e-08 Score=79.13 Aligned_cols=38 Identities=42% Similarity=0.826 Sum_probs=34.7
Q ss_pred CCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhhhhCC
Q 016833 10 DNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDALKEG 47 (382)
Q Consensus 10 ~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g 47 (382)
...+||+||||+++ || ||+||.+|+.||++|+.++.++
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 46799999999998 99 9999999999999999998754
No 18
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.50 E-value=1.3e-08 Score=78.80 Aligned_cols=37 Identities=46% Similarity=0.873 Sum_probs=32.5
Q ss_pred CCCCcchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhh
Q 016833 8 KSDNTKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDAL 44 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~ 44 (382)
.....+||+||||+++ || ||+||.+|+.||++|+.++
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 3456799999999998 99 9999999999999997654
No 19
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.46 E-value=2.8e-07 Score=81.29 Aligned_cols=72 Identities=18% Similarity=0.126 Sum_probs=59.6
Q ss_pred cceeeeccCHHHHhCCCEEEEEec----CC----cEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEEC
Q 016833 236 DLFVEHTLSLTEALCGFQFVITHL----DG----RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDF 307 (382)
Q Consensus 236 DL~~~~~I~l~eAl~G~~~~i~tl----dG----~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~ 307 (382)
|+.+++.|||.||+.|+++.|.-- +| +.+.|+|||| ++.|+.++++|+|-+-. .....|||||+++|.-
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~~~-~gg~~GDl~v~i~v~~ 78 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPG--WKAGTKITYKNQGDYNP-QTGRRKTLQFVIQEKS 78 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTT--CCTTCEEEESSCSSBCS-SSSCBCEEEEEEEECC
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCC--ccCCCEEEEeccccCCC-CCCccccEEEEEEEcc
Confidence 789999999999999998887632 23 7899999999 89999999999998643 2345799999999975
Q ss_pred CCC
Q 016833 308 PES 310 (382)
Q Consensus 308 P~~ 310 (382)
.+.
T Consensus 79 h~~ 81 (170)
T 1c3g_A 79 HPN 81 (170)
T ss_dssp CSS
T ss_pred CCc
Confidence 444
No 20
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.44 E-value=3.1e-07 Score=81.71 Aligned_cols=74 Identities=16% Similarity=0.095 Sum_probs=60.6
Q ss_pred cccceeeeccCHHHHhCCCEEEEEec-----------CCcEEEEEeCCCccccCCcEEEEcCCCCC-CCCCCCCCCcEEE
Q 016833 234 GDDLFVEHTLSLTEALCGFQFVITHL-----------DGRQLLIKSQPGEVVKPDQFKAINDEGMP-MYQRPFMRGKLYI 301 (382)
Q Consensus 234 g~DL~~~~~I~l~eAl~G~~~~i~tl-----------dG~~l~i~~p~g~vi~~g~~~~i~g~GmP-~~~~~~~~GdL~i 301 (382)
+.|+.+++.|||.||+.|.++.|.-- ..+.+.|+|||| ++.|+.++++|+|-+ .. ....|||||
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~g~~--gg~~GDl~v 78 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPG--WKDGTKLTYSGEGDQESP--GTSPGDLVL 78 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTT--CCTTCEEEETTCSCCSST--TSCCCEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCC--CcCCcEEEEeeccCCCCC--CCccccEEE
Confidence 67999999999999999998877632 247799999999 899999999999987 33 345799999
Q ss_pred EEEEECCCCC
Q 016833 302 HFTVDFPESL 311 (382)
Q Consensus 302 ~~~V~~P~~l 311 (382)
.++|.-.+.+
T Consensus 79 ~i~~~~h~~F 88 (180)
T 2q2g_A 79 IIQTKTHPRF 88 (180)
T ss_dssp EEEECCCSSC
T ss_pred EEEEEecccE
Confidence 9999744443
No 21
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.43 E-value=2.9e-08 Score=78.60 Aligned_cols=38 Identities=45% Similarity=0.809 Sum_probs=33.7
Q ss_pred CCCcchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhhhC
Q 016833 9 SDNTKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDALKE 46 (382)
Q Consensus 9 ~~~~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~ 46 (382)
....+||+||||+++ || ||+||.+|+.||++|..++..
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 345699999999998 99 999999999999999877654
No 22
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.40 E-value=2.6e-08 Score=76.39 Aligned_cols=35 Identities=54% Similarity=0.993 Sum_probs=31.5
Q ss_pred CCCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchhh
Q 016833 9 SDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGEDA 43 (382)
Q Consensus 9 ~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~g 43 (382)
....+||+||||+++ || ||+||.+|+.||++|+.+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 456799999999998 99 999999999999998754
No 23
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.38 E-value=3.4e-07 Score=88.93 Aligned_cols=77 Identities=22% Similarity=0.207 Sum_probs=59.7
Q ss_pred ccccccceeeeccCHHHHhCCCEEEEEec------C-------CcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCC
Q 016833 231 KRKGDDLFVEHTLSLTEALCGFQFVITHL------D-------GRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRG 297 (382)
Q Consensus 231 ~R~g~DL~~~~~I~l~eAl~G~~~~i~tl------d-------G~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~G 297 (382)
.++|.||.+++.|+|.||+.|.++.|..- . .+.|.|+|||| +++|++++++|+|.|... ....|
T Consensus 137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~G--v~~G~~Irl~G~G~~g~~-gg~~G 213 (329)
T 3lz8_A 137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAG--VVDGQRIRLKGQGTPGEN-GGPNG 213 (329)
T ss_dssp CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTT--CCTTCEEEESSCSCCC----CCCC
T ss_pred cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCC--CCCCCEEEEcccccCCCC-CCCCC
Confidence 35688999999999999999987665422 2 34689999999 799999999999998642 34589
Q ss_pred cEEEEEEEECCCC
Q 016833 298 KLYIHFTVDFPES 310 (382)
Q Consensus 298 dL~i~~~V~~P~~ 310 (382)
||||+++|.-.+.
T Consensus 214 DL~v~I~v~~h~~ 226 (329)
T 3lz8_A 214 DLWLVIHIAPHPL 226 (329)
T ss_dssp CEEEEECCCCCSS
T ss_pred cEEEEEEEecCCc
Confidence 9999998874443
No 24
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=2.6e-08 Score=76.46 Aligned_cols=35 Identities=46% Similarity=0.869 Sum_probs=31.3
Q ss_pred CCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhh
Q 016833 9 SDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDA 43 (382)
Q Consensus 9 ~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g 43 (382)
....+||+||||+++ || ||+||.+|+.||++|+.+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 346799999999998 99 999999999999998754
No 25
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.37 E-value=3e-08 Score=81.49 Aligned_cols=38 Identities=26% Similarity=0.590 Sum_probs=34.0
Q ss_pred CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhh
Q 016833 8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALK 45 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~ 45 (382)
+....+||+||||+++ || ||+||.+|+.||++|+.++.
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 4567899999999998 99 99999999999999987654
No 26
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.35 E-value=1.2e-06 Score=77.93 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=58.6
Q ss_pred cccceeeeccCHHHHhCCCEEEEEec------CC-------cEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEE
Q 016833 234 GDDLFVEHTLSLTEALCGFQFVITHL------DG-------RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLY 300 (382)
Q Consensus 234 g~DL~~~~~I~l~eAl~G~~~~i~tl------dG-------~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~ 300 (382)
+.|+.+++.|||.||+.|.++.|.-- .| +.+.|+||+| ++.|+.++++|+|-+..+ ...||||
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G--~~~G~~ir~~G~G~~~~~--g~~GDl~ 77 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKG--WKEGTKITFPKEGDQTSN--NIPADIV 77 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTT--CCTTCEEEETTCSCCCSS--SCCCCEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCC--ccCCcEEEEeeccccCCC--CCcccEE
Confidence 46899999999999999998776522 34 6789999999 899999999999987553 3579999
Q ss_pred EEEEEECCCCCC
Q 016833 301 IHFTVDFPESLS 312 (382)
Q Consensus 301 i~~~V~~P~~l~ 312 (382)
|.++|.-.+.+.
T Consensus 78 v~i~~~~h~~F~ 89 (181)
T 3agx_A 78 FVLKDKPHNIFK 89 (181)
T ss_dssp EEEEECCCSSCE
T ss_pred EEEEEeccccce
Confidence 999998544443
No 27
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.33 E-value=8.1e-08 Score=78.53 Aligned_cols=38 Identities=37% Similarity=0.731 Sum_probs=34.5
Q ss_pred CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhh
Q 016833 8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALK 45 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~ 45 (382)
.....+||+||||+++ || ||+||.+|+.||++|..++.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 4567899999999998 99 99999999999999998865
No 28
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=98.33 E-value=3e-08 Score=79.70 Aligned_cols=35 Identities=54% Similarity=0.990 Sum_probs=29.7
Q ss_pred cchhhhcCCCCC--------------------------------------ce-eccCccccccccccchhhhhC
Q 016833 12 TKYYEILGVSKK--------------------------------------RF-VLSDPEKREIYDQYGEDALKE 46 (382)
Q Consensus 12 ~~~Y~iLgv~~~--------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~ 46 (382)
+|||+||||+++ || ||+||.+|+.||++|.+++.+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 589999999998 99 999999999999999887764
No 29
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=1.8e-07 Score=75.00 Aligned_cols=39 Identities=28% Similarity=0.584 Sum_probs=33.2
Q ss_pred CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccc--cchhhhhC
Q 016833 8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQ--YGEDALKE 46 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~--~G~~g~~~ 46 (382)
.+...+||+||||+++ || ||+||.+|+.||+ ++.+.+.+
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e~~~~ 91 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLRG 91 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHHHHHC
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccccccccC
Confidence 4567899999999998 99 9999999999998 45666653
No 30
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.29 E-value=9.4e-08 Score=86.22 Aligned_cols=52 Identities=38% Similarity=0.821 Sum_probs=40.3
Q ss_pred cchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCCCCCCCC
Q 016833 12 TKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEGMGGGGG 53 (382)
Q Consensus 12 ~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g~~~~~~ 53 (382)
.|||+||||+++ || ||+||.+|+.||+||+.++..+. ++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~---~~ 78 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ---GG 78 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC---SC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc---cc
Confidence 589999999998 99 99999999999999998876432 11
Q ss_pred CCCchhhhhcccC
Q 016833 54 AHDPFDIFQSFFG 66 (382)
Q Consensus 54 ~~~~~d~F~~~Fg 66 (382)
....+.+|...|+
T Consensus 79 ~~~~~~~~~~~fg 91 (210)
T 3apq_A 79 QYESWSYYRYDFG 91 (210)
T ss_dssp CCCCHHHHHHSSS
T ss_pred ccccccccccccc
Confidence 2334566666665
No 31
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=98.28 E-value=6.5e-08 Score=75.95 Aligned_cols=35 Identities=40% Similarity=0.737 Sum_probs=31.6
Q ss_pred CCCCcchhhhcCCCCC------------------------------------ce-eccCccccccccccchh
Q 016833 8 KSDNTKYYEILGVSKK------------------------------------RF-VLSDPEKREIYDQYGED 42 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~------------------------------------AY-vLsD~~KR~~YD~~G~~ 42 (382)
.....|||+||||+++ || ||+||.+|+.||++|+.
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 4467899999999998 99 99999999999999874
No 32
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=98.07 E-value=4.8e-07 Score=71.65 Aligned_cols=33 Identities=24% Similarity=0.537 Sum_probs=29.7
Q ss_pred CCCCcchhhhcCCCCC-------------------------------------------ce-eccCccccccccccc
Q 016833 8 KSDNTKYYEILGVSKK-------------------------------------------RF-VLSDPEKREIYDQYG 40 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~-------------------------------------------AY-vLsD~~KR~~YD~~G 40 (382)
++...+||+||||+++ || ||+||.+|+.||++.
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 4567899999999998 99 999999999999864
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.96 E-value=8.2e-07 Score=95.28 Aligned_cols=40 Identities=40% Similarity=0.828 Sum_probs=25.7
Q ss_pred CCCCcchhhhcCCCCC-------------------------------------ce-eccCccccccccccchhhhhCC
Q 016833 8 KSDNTKYYEILGVSKK-------------------------------------RF-VLSDPEKREIYDQYGEDALKEG 47 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~-------------------------------------AY-vLsD~~KR~~YD~~G~~g~~~g 47 (382)
...++|||+||||+++ || |||||++|+.||+||++++..+
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 4567899999999998 99 9999999999999999988754
No 34
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.90 E-value=4.9e-06 Score=67.18 Aligned_cols=60 Identities=28% Similarity=0.692 Sum_probs=44.6
Q ss_pred cccCcceeEEeeceeeeCCCCCCCCccC---C---CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEecCC
Q 016833 96 DLYNGTSKKLSLSRNVICTKCKGKGSKS---G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDK 169 (382)
Q Consensus 96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~---~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~k 169 (382)
+.+.|...+ .-.....|+.|+|+|... + ...+|+.|+|+|.++ ..+|+.|+|.|.+...+
T Consensus 32 ~~C~G~G~~-~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i-------------~~~C~~C~G~G~v~~~k 97 (104)
T 2ctt_A 32 ERCNGKGNE-PGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII-------------ISPCVVCRGAGQAKQKK 97 (104)
T ss_dssp SSSSSSSSC-TTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC-------------SSCCSSSSSCSEECCCC
T ss_pred CCCcCCccC-CCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC-------------CCcCCCCCCeeEEEEEE
Confidence 556676543 223457899999999652 1 236899999999865 68999999999986544
No 35
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=97.88 E-value=6.5e-07 Score=78.96 Aligned_cols=33 Identities=15% Similarity=0.392 Sum_probs=29.8
Q ss_pred CCCcchhhhcCCCCC-----------------------------------ce-eccCccccccccccch
Q 016833 9 SDNTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIYDQYGE 41 (382)
Q Consensus 9 ~~~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~YD~~G~ 41 (382)
....+||+||||+++ || |||||.+|+.||+||.
T Consensus 8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 345799999999987 99 9999999999999985
No 36
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.86 E-value=4.7e-06 Score=63.71 Aligned_cols=57 Identities=32% Similarity=0.778 Sum_probs=42.9
Q ss_pred cccCcceeEEeeceeeeCCCCCCCCccCC------CcccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEe
Q 016833 96 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 166 (382)
Q Consensus 96 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~ 166 (382)
..++|.... .......|+.|+|+|.... ...+|+.|+|+|.++ ..+|+.|+|.|.+.
T Consensus 15 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~-------------~~~C~~C~G~G~~~ 77 (79)
T 1exk_A 15 DVCHGSGAK-PGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI-------------KDPCNKCHGHGRVE 77 (79)
T ss_dssp GGGTTTSBC-SSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC-------------SSBCGGGTTSSEEE
T ss_pred CCCcccccC-CCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC-------------CCcCCCCCCeEEEe
Confidence 556676643 2344579999999997532 125899999999864 67899999999875
No 37
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=97.81 E-value=1.8e-06 Score=70.39 Aligned_cols=34 Identities=26% Similarity=0.518 Sum_probs=30.7
Q ss_pred CCCCcchhhhcCCCCC-----------------------------------------ce-eccCccccccccccch
Q 016833 8 KSDNTKYYEILGVSKK-----------------------------------------RF-VLSDPEKREIYDQYGE 41 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~-----------------------------------------AY-vLsD~~KR~~YD~~G~ 41 (382)
+....+||+||||+++ || ||+||.+|+.||+++.
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4567899999999987 99 9999999999999875
No 38
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=97.80 E-value=2.7e-06 Score=73.63 Aligned_cols=33 Identities=24% Similarity=0.482 Sum_probs=29.5
Q ss_pred CCCcchhhhcCCCCC-------------------------------------------ce-eccCccccccccccch
Q 016833 9 SDNTKYYEILGVSKK-------------------------------------------RF-VLSDPEKREIYDQYGE 41 (382)
Q Consensus 9 ~~~~~~Y~iLgv~~~-------------------------------------------AY-vLsD~~KR~~YD~~G~ 41 (382)
+..+|||+||||+++ || ||+||.+|+.||.++.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 456799999999998 99 9999999999998654
No 39
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.77 E-value=4.7e-06 Score=58.93 Aligned_cols=33 Identities=30% Similarity=0.859 Sum_probs=28.4
Q ss_pred eeecccCCCCcceeEEecCCCCCCCCCCceEEEec
Q 016833 150 QQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEK 184 (382)
Q Consensus 150 ~~~~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~ 184 (382)
|+++.+|+.|+|+|+++. ++|+.|+|.|++.+.
T Consensus 6 qq~~~~C~~C~GsG~~i~--~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 6 DDLETTCPNCNGSGREEP--EPCPKCLGKGVILTA 38 (53)
T ss_dssp HHHEEECTTTTTSCEETT--EECTTTTTSSEEECH
T ss_pred CceeccCcCCcccccCCC--CcCCCCCCcEEEEEE
Confidence 567889999999999886 889999999988764
No 40
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=97.63 E-value=5e-06 Score=68.37 Aligned_cols=31 Identities=16% Similarity=0.386 Sum_probs=28.6
Q ss_pred CcchhhhcCCCCC-----------------------------------ce-eccCccccccccccch
Q 016833 11 NTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIYDQYGE 41 (382)
Q Consensus 11 ~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~YD~~G~ 41 (382)
..+||+||||+++ || ||+||.||+.||.||.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999987 99 9999999999999874
No 41
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.60 E-value=8.4e-07 Score=93.05 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=58.4
Q ss_pred EeccccccccccCcceeEEeeceeeeCCCCCCCCccCCC----cccCCCCCcccEEEE--------EEecCCccceeecc
Q 016833 87 IHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGA----SMKCSGCQGSGMKVS--------IRHLGPSMIQQMQH 154 (382)
Q Consensus 87 ~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~----~~~C~~C~G~G~~~~--------~~~~gpg~~~~~~~ 154 (382)
.+.+.++|+|+..|.++++.+.+...|..|+|+|++.+. ..+|+.|+|+..... ++.+=.|.+-+...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 467889999999999999999999999999999999875 378999999941100 00000012224467
Q ss_pred cCCCCcceeE
Q 016833 155 PCNECKGTGE 164 (382)
Q Consensus 155 ~C~~C~G~G~ 164 (382)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 8999999875
No 42
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=97.39 E-value=1.6e-05 Score=70.14 Aligned_cols=15 Identities=33% Similarity=0.556 Sum_probs=14.7
Q ss_pred ce-eccCccccccccc
Q 016833 24 RF-VLSDPEKREIYDQ 38 (382)
Q Consensus 24 AY-vLsD~~KR~~YD~ 38 (382)
|| ||+||.+|+.||.
T Consensus 60 AY~vL~dp~~R~~Yd~ 75 (174)
T 3hho_A 60 AYQTLKDPLRRAEYLL 75 (174)
T ss_dssp HHHHHHSHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHH
Confidence 99 9999999999997
No 43
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=97.17 E-value=4.2e-05 Score=69.33 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=14.5
Q ss_pred ce-eccCccccccccc
Q 016833 24 RF-VLSDPEKREIYDQ 38 (382)
Q Consensus 24 AY-vLsD~~KR~~YD~ 38 (382)
|| |||||.+|+.||.
T Consensus 99 AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 99 AYKTLLAPLSRGLYLL 114 (207)
T ss_dssp HHHHHHSHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHH
Confidence 99 9999999999995
No 44
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=97.13 E-value=3.7e-05 Score=67.62 Aligned_cols=16 Identities=25% Similarity=0.270 Sum_probs=15.3
Q ss_pred ce-eccCcccccccccc
Q 016833 24 RF-VLSDPEKREIYDQY 39 (382)
Q Consensus 24 AY-vLsD~~KR~~YD~~ 39 (382)
|| |||||.+|+.||..
T Consensus 57 AY~vL~dp~~R~~Yd~~ 73 (171)
T 1fpo_A 57 AWQTLRHPLMRAEYLLS 73 (171)
T ss_dssp HHHHHHSHHHHHHHHHH
T ss_pred HHHHHcCchHHHHHHHH
Confidence 99 99999999999985
No 45
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.87 E-value=0.00036 Score=49.18 Aligned_cols=28 Identities=29% Similarity=0.840 Sum_probs=16.3
Q ss_pred eeeCCCCCCCCccCCCcccCCCCCcccEEE
Q 016833 110 NVICTKCKGKGSKSGASMKCSGCQGSGMKV 139 (382)
Q Consensus 110 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~ 139 (382)
...|+.|+|+|.... .+|+.|+|+|.+.
T Consensus 9 ~~~C~~C~GsG~~i~--~~C~~C~G~G~v~ 36 (53)
T 3lcz_A 9 ETTCPNCNGSGREEP--EPCPKCLGKGVIL 36 (53)
T ss_dssp EEECTTTTTSCEETT--EECTTTTTSSEEE
T ss_pred eccCcCCcccccCCC--CcCCCCCCcEEEE
Confidence 356666666665432 4566666666543
No 46
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.85 E-value=0.00038 Score=49.07 Aligned_cols=28 Identities=36% Similarity=0.935 Sum_probs=18.1
Q ss_pred eeeCCCCCCCCccCCCcccCCCCCcccEEE
Q 016833 110 NVICTKCKGKGSKSGASMKCSGCQGSGMKV 139 (382)
Q Consensus 110 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~ 139 (382)
...|+.|+|+|.... .+|+.|+|+|.++
T Consensus 9 ~~~C~~C~GsG~~~~--~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 9 EVACPKCERAGEIEG--TPCPACSGKGVIL 36 (53)
T ss_dssp EEECTTTTTSSEETT--EECTTTTTSSEEE
T ss_pred cccCCCCcceeccCC--CCCccCCCCccEE
Confidence 356777777776532 4677777777654
No 47
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.82 E-value=0.00071 Score=47.65 Aligned_cols=28 Identities=29% Similarity=0.815 Sum_probs=24.5
Q ss_pred ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEec
Q 016833 127 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 167 (382)
Q Consensus 127 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 167 (382)
.+|+.|+|+|.++ ..+|+.|+|.|.++.
T Consensus 10 ~~C~~C~GsG~~~-------------~~~C~~C~G~G~v~~ 37 (53)
T 2bx9_A 10 VACPKCERAGEIE-------------GTPCPACSGKGVILT 37 (53)
T ss_dssp EECTTTTTSSEET-------------TEECTTTTTSSEEEC
T ss_pred ccCCCCcceeccC-------------CCCCccCCCCccEEE
Confidence 5899999999863 578999999999875
No 48
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.58 E-value=0.00018 Score=56.42 Aligned_cols=16 Identities=19% Similarity=0.443 Sum_probs=13.5
Q ss_pred CCCCcchhhhcCCCCC
Q 016833 8 KSDNTKYYEILGVSKK 23 (382)
Q Consensus 8 ~~~~~~~Y~iLgv~~~ 23 (382)
+....+||+||||+++
T Consensus 23 ~~~~~~~y~iLgv~~~ 38 (90)
T 2ys8_A 23 IRNSKDSWDMLGVKPG 38 (90)
T ss_dssp HHTCSSHHHHHTCCTT
T ss_pred HhcCCCHHHHcCcCCC
Confidence 3456899999999998
No 49
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=96.58 E-value=0.00015 Score=55.46 Aligned_cols=32 Identities=9% Similarity=0.181 Sum_probs=27.2
Q ss_pred CcchhhhcCCCCC-----------------------------------ce-eccCccccccccccchhh
Q 016833 11 NTKYYEILGVSKK-----------------------------------RF-VLSDPEKREIYDQYGEDA 43 (382)
Q Consensus 11 ~~~~Y~iLgv~~~-----------------------------------AY-vLsD~~KR~~YD~~G~~g 43 (382)
..++|+||||+++ || ||+|+.+|+. |.||+++
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 4689999999987 99 9999999988 5687654
No 50
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=96.20 E-value=0.00062 Score=60.34 Aligned_cols=16 Identities=31% Similarity=0.519 Sum_probs=15.2
Q ss_pred ce-eccCcccccccccc
Q 016833 24 RF-VLSDPEKREIYDQY 39 (382)
Q Consensus 24 AY-vLsD~~KR~~YD~~ 39 (382)
|| |||||.+|+.||..
T Consensus 64 AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 64 AYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp HHHHHHSHHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHHH
Confidence 99 99999999999983
No 51
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=93.45 E-value=0.0099 Score=44.13 Aligned_cols=15 Identities=13% Similarity=0.346 Sum_probs=12.3
Q ss_pred CCCcchhhhcCCCC-C
Q 016833 9 SDNTKYYEILGVSK-K 23 (382)
Q Consensus 9 ~~~~~~Y~iLgv~~-~ 23 (382)
+...++|+||||++ +
T Consensus 11 m~~~~~y~iLgl~~~~ 26 (71)
T 2guz_A 11 MNSKEALQILNLTENT 26 (71)
T ss_dssp CCHHHHHHHTTCCTTT
T ss_pred CCHHHHHHHcCCCCCC
Confidence 34579999999998 5
No 52
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=91.70 E-value=0.011 Score=45.94 Aligned_cols=15 Identities=13% Similarity=-0.057 Sum_probs=12.9
Q ss_pred CCCcchhhhcCCCCC
Q 016833 9 SDNTKYYEILGVSKK 23 (382)
Q Consensus 9 ~~~~~~Y~iLgv~~~ 23 (382)
+...++|+||||+++
T Consensus 13 ~~~~~~y~vLgv~~~ 27 (88)
T 1iur_A 13 SILKEVTSVVEQAWK 27 (88)
T ss_dssp SCHHHHHHHHHHTTS
T ss_pred ccHHHHHHHhCCCCC
Confidence 445799999999988
No 53
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=45.48 E-value=67 Score=29.44 Aligned_cols=33 Identities=27% Similarity=0.615 Sum_probs=17.9
Q ss_pred ccCCCCCcccEEEEEEecCCccceeecccCCCCcceeE
Q 016833 127 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE 164 (382)
Q Consensus 127 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 164 (382)
-.|..|+-... ..+... .+ .....|+.|.++|.
T Consensus 135 f~C~~C~~~~~---v~~~~~-~~-~~P~~Cp~C~~~~f 167 (279)
T 1ltl_A 135 FECRGCMRHHA---VTQSTN-MI-TEPSLCSECGGRSF 167 (279)
T ss_dssp EEETTTCCEEE---EECSSS-SC-CCCSCCTTTCCCCE
T ss_pred EEcCCCCCEEE---EEecCC-cc-cCCCcCCCCCCCCc
Confidence 46999975432 223222 11 22356888887773
No 54
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=43.59 E-value=33 Score=28.66 Aligned_cols=52 Identities=15% Similarity=0.207 Sum_probs=36.0
Q ss_pred HhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEE
Q 016833 248 ALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIH 302 (382)
Q Consensus 248 Al~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i~ 302 (382)
.|-|+++. ...||+.+..+.|++.+++||..+.|-.+|.-....| -.||+-+
T Consensus 51 ~LgGW~L~-r~v~g~~~~y~FP~~~~L~pg~~VtVwa~g~g~~~~p--p~dlv~~ 102 (144)
T 3jt0_A 51 PMGGWEMI-RKIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTASP--PTDLIWK 102 (144)
T ss_dssp ECTTCEEE-EEETTEEEEEECCTTCEECTTCEEEEEETTSCCCCBT--TTEEEET
T ss_pred ecCCcEEE-EEeCCCceEEEcCCCcEECCCCEEEEEECCCCCCCCC--Chhheec
Confidence 56677766 3467776778999999999999999987775322122 3556543
No 55
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=37.17 E-value=40 Score=31.01 Aligned_cols=14 Identities=7% Similarity=0.188 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHhCC
Q 016833 311 LSPDQCKMLETVLP 324 (382)
Q Consensus 311 l~~~~~~~l~~~lp 324 (382)
+|+++.+.++++..
T Consensus 256 ~t~ed~~~i~~ls~ 269 (279)
T 1ltl_A 256 ISEEDEEKIKELAG 269 (279)
T ss_dssp --------------
T ss_pred CCHHHHHHHHHHhc
Confidence 66777777766653
No 56
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=36.56 E-value=90 Score=25.74 Aligned_cols=39 Identities=13% Similarity=0.222 Sum_probs=30.3
Q ss_pred HhCCCEEEEEecCCc-EEEEEeCCCccccCCcEEEEcCCCC
Q 016833 248 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGM 287 (382)
Q Consensus 248 Al~G~~~~i~tldG~-~l~i~~p~g~vi~~g~~~~i~g~Gm 287 (382)
.|-|+++.= ..||+ .+..+.|++.+++||..++|-..|.
T Consensus 47 ~L~GW~L~r-~v~g~~~~~y~Fp~~~~L~pg~~VtIws~~~ 86 (139)
T 2lll_A 47 SLGNWRIKR-QVLEGEEIAYKFTPKYILRAGQMVTVWAAGA 86 (139)
T ss_dssp ECSSCEEEE-EETTSCEEEEECCTTCEECTTCEEEEEEGGG
T ss_pred ccCCCEEEE-ecCCCccEEEEECCCcEECCCCEEEEEeCCC
Confidence 566777663 44654 3788999999999999999998775
No 57
>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonu nuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=35.41 E-value=11 Score=38.27 Aligned_cols=32 Identities=34% Similarity=0.666 Sum_probs=22.0
Q ss_pred cEEEEEE-ecCCccceeecccCCCCcceeEEec
Q 016833 136 GMKVSIR-HLGPSMIQQMQHPCNECKGTGETIN 167 (382)
Q Consensus 136 G~~~~~~-~~gpg~~~~~~~~C~~C~G~G~~~~ 167 (382)
|.+-.+| +.++.+......+|+.|+|+|.+..
T Consensus 390 GLvEmTRkR~r~sL~e~~~~~Cp~C~G~G~v~s 422 (517)
T 2bx2_L 390 GLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRD 422 (517)
T ss_dssp SEEEEEECCCSCCHHHHHCCCCSSSSSSSCCCC
T ss_pred ceEEEeecCcCcChhhhhcCcCCCcCCceeECC
Confidence 4444343 4567677677788999999998754
No 58
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=32.07 E-value=1.1e+02 Score=27.60 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=29.8
Q ss_pred cccCCCCcceeEEecCCCCCCCCCCceEEEeceEEEEEecc-CCCCCC---EEEeCCCCCCCCCCCCccEEEEE
Q 016833 153 QHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEK-GMQNGQ---KITFPGEADEAPDTVTGDIVFVL 222 (382)
Q Consensus 153 ~~~C~~C~G~G~~~~~k~~C~~C~G~g~~~~~~~l~V~Ip~-G~~~g~---~i~~~geG~~~~g~~~GDl~v~i 222 (382)
...|+.|..+|.....-+.| ......+++|.=.| .++.|+ .|.+-=.++-.....|||-+.+.
T Consensus 168 P~~Cp~C~~~~~~~l~~~~s-------~f~D~Q~ikiQE~pe~vp~G~~Prsi~v~l~~dLvd~~~PGDrV~vt 234 (268)
T 2vl6_A 168 PTICPKCGKPGQFRLIPEKT-------KLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVT 234 (268)
T ss_dssp CSBCTTTCCBCEEEECGGGC-------EEEEEEEEEEECCGGGSCTTSCCCEEEEEEEGGGTTSSCTTCEEEEE
T ss_pred CccCCCCCCCCCEEEecCcc-------EEEeeEEEEEEeCCCCCCCCCCCcEEEEEEccCccCcccCCCEEEEE
Confidence 35688888877433222222 22233444443222 233343 23333334434456789977644
No 59
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=28.32 E-value=8.8 Score=40.21 Aligned_cols=29 Identities=14% Similarity=0.336 Sum_probs=20.4
Q ss_pred ccCCCCCcccEEEEEEecCCccceeecccCCCCcce
Q 016833 127 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 162 (382)
Q Consensus 127 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 162 (382)
.+|..|+|+|-. +|-.......|+.|+|.
T Consensus 192 ~~C~tCHGsGA~-------~Gt~~~~~~tC~tCHGs 220 (669)
T 3pmq_A 192 DTCNSCHSNLAF-------HGGRYNQVETCVTCHNS 220 (669)
T ss_dssp HHHHHHHSSCCT-------TTTTSCSSSCSTTTSST
T ss_pred CcCCCCCCCCCc-------CCccCcCCccCCCCCCC
Confidence 579999999851 22211235789999999
No 60
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=28.00 E-value=96 Score=24.92 Aligned_cols=39 Identities=15% Similarity=0.206 Sum_probs=30.2
Q ss_pred HhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcCCCC
Q 016833 248 ALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGM 287 (382)
Q Consensus 248 Al~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g~Gm 287 (382)
.|-|+++.- ..||.....+.|++.+++||..+.|-.+|.
T Consensus 38 ~L~gW~l~r-~v~~~~~~y~Fp~~~~L~pg~~vtVwa~g~ 76 (123)
T 3hn9_A 38 PMGGWEMIR-KIGDTSVSYKYTSRYVLKAGQTVTIWAANA 76 (123)
T ss_dssp ECTTCEEEE-EETTEEEEEECCTTCEECTTCEEEEEETTS
T ss_pred ecCCcEEEE-EeCCCceEEEcCCCcEECCCCEEEEEECCC
Confidence 566777663 357765568899999999999999988775
No 61
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=27.81 E-value=21 Score=38.39 Aligned_cols=33 Identities=33% Similarity=0.707 Sum_probs=20.5
Q ss_pred cCCCCCcccEEEEEEecCCccceeecccCCCCcceeE
Q 016833 128 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE 164 (382)
Q Consensus 128 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 164 (382)
.|+.|.|.|.+....+..| .+..+|+.|+|+..
T Consensus 640 ~c~~c~g~G~~~~~~~f~~----~v~~~c~~c~G~r~ 672 (842)
T 2vf7_A 640 RCEHCQGEGWVMVELLFLP----SVYAPCPVCHGTRY 672 (842)
T ss_dssp BCTTTTTCSEEEETTCSSS----CEEEECTTTTTCCB
T ss_pred ccccccCCCccchhhhcCC----ccceecccccCccc
Confidence 4999999998753333222 33556777777654
No 62
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=26.59 E-value=10 Score=29.26 Aligned_cols=12 Identities=8% Similarity=0.282 Sum_probs=11.0
Q ss_pred cchhhhcCCCCC
Q 016833 12 TKYYEILGVSKK 23 (382)
Q Consensus 12 ~~~Y~iLgv~~~ 23 (382)
.++|++|||+++
T Consensus 33 ~~~y~~Lgv~~~ 44 (92)
T 2qwo_B 33 ETKWKPVGMADL 44 (92)
T ss_dssp CCSCCCCCGGGS
T ss_pred ccCCeecCCCCC
Confidence 589999999998
No 63
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=25.54 E-value=1.4e+02 Score=23.94 Aligned_cols=51 Identities=18% Similarity=0.155 Sum_probs=35.0
Q ss_pred HhCCCEEEEEecCCc-EEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEE
Q 016833 248 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 301 (382)
Q Consensus 248 Al~G~~~~i~tldG~-~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i 301 (382)
.|-|+++.= ..||+ .+..+.|++.+++||..++|-..|.-....+ -.||+-
T Consensus 32 ~L~gW~l~r-~v~~~~~~~y~Fp~~~~L~pg~~vtIws~~~g~~~~p--p~dlv~ 83 (121)
T 1ifr_A 32 SMGNWQIKR-QNGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHSP--PTDLVW 83 (121)
T ss_dssp ECTTCEEEE-EETTSCCEEEECCSSCEECTTCEEEEEETTSSCCCBT--TTEEEE
T ss_pred ccCCCEEEE-EcCCCccEEEEeCCCcEECCCCEEEEEeCCCCCCCCC--chhEEE
Confidence 566777663 34654 3788899999999999999998875322222 355654
No 64
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=25.17 E-value=72 Score=24.69 Aligned_cols=23 Identities=22% Similarity=0.540 Sum_probs=18.1
Q ss_pred EEEEEEEECCCCCCHHHHHHHHH
Q 016833 299 LYIHFTVDFPESLSPDQCKMLET 321 (382)
Q Consensus 299 L~i~~~V~~P~~l~~~~~~~l~~ 321 (382)
..|++.|.+|..++++++..|+.
T Consensus 3 FlV~m~V~~P~~~~~~~~~~~~a 25 (96)
T 1mli_A 3 FHVKMTVKLPVDMDPAKATQLKA 25 (96)
T ss_pred EEEEEEeeCCCCCCHHHHHHHHH
Confidence 35899999999999888665543
No 65
>3vdz_A Ubiquitin-40S ribosomal protein S27A; gadolinium, MRI contrast agent, peptide-based contrast agent lanthanide binding TAG; 2.40A {Synthetic construct} PDB: 2ojr_A
Probab=24.97 E-value=56 Score=25.44 Aligned_cols=40 Identities=20% Similarity=0.548 Sum_probs=25.6
Q ss_pred ccccceeeeccC---HHHHhCCCEEEEEecCCcEEEEEeCCCc
Q 016833 233 KGDDLFVEHTLS---LTEALCGFQFVITHLDGRQLLIKSQPGE 272 (382)
Q Consensus 233 ~g~DL~~~~~I~---l~eAl~G~~~~i~tldG~~l~i~~p~g~ 272 (382)
++.++++....+ ..+.....++.|++++|+.+.|.+++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~m~I~Vk~~~G~~~~l~v~~~~ 56 (111)
T 3vdz_A 14 DGDELYIDTDNDGSIDGDELLAMQIFVKTLTGKTITLEVEPSD 56 (111)
T ss_dssp CGGGEEECTTCSSCCCTGGGGCEEEEEECSSSCEEEEEECTTC
T ss_pred CCceeccccccccccCcCCCccEEEEEEeCCCCEEEEEeCCCC
Confidence 456666665554 3344445677788888887777776643
No 66
>1gmu_A UREE; metallochaperone; 1.5A {Klebsiella aerogenes} SCOP: b.107.1.1 d.58.38.1 PDB: 1gmw_A 1gmw_D 1gmv_A
Probab=24.72 E-value=1.3e+02 Score=24.67 Aligned_cols=45 Identities=16% Similarity=0.153 Sum_probs=36.2
Q ss_pred eeeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833 239 VEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND 284 (382)
Q Consensus 239 ~~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g 284 (382)
-++.++..+. .=....+.|-+|+.+-|.+|.+..+++|+++....
T Consensus 16 ~~v~L~~~~r-~k~R~r~~t~~G~e~~l~L~r~~~L~dGDvL~~dd 60 (143)
T 1gmu_A 16 ASVTLPIDVR-VKSRVKVTLNDGRDAGLLLPRGLLLRGGDVLSNEE 60 (143)
T ss_dssp EEEEECHHHH-TCSEEEEECTTSCEEEEECCSSCCCCTTCEEECTT
T ss_pred eEEEeCHHHH-hcceEEEECCCCCEEEEECCCCcccCCCCEEEECC
Confidence 4567777666 34477888999999999999999999999997654
No 67
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=24.38 E-value=65 Score=23.72 Aligned_cols=25 Identities=28% Similarity=0.631 Sum_probs=17.2
Q ss_pred HhCCCEEEEEecCCcEEEEEeCCCc
Q 016833 248 ALCGFQFVITHLDGRQLLIKSQPGE 272 (382)
Q Consensus 248 Al~G~~~~i~tldG~~l~i~~p~g~ 272 (382)
-|-|.++.|.+++|+.+.|.+++..
T Consensus 6 ~~~~~~i~v~~~~G~~~~l~v~~~~ 30 (88)
T 1sif_A 6 HLQGLQLFIKTLTGKTFTVEMEPSD 30 (88)
T ss_dssp ----CEEEEEETTSCEEEEECCTTS
T ss_pred cccceEEEEEeCCCCEEEEEECCCC
Confidence 3668888899999988888877654
No 68
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=24.09 E-value=37 Score=25.47 Aligned_cols=54 Identities=24% Similarity=0.354 Sum_probs=28.4
Q ss_pred eeeeCCCCCCCCccCCC---cccCCCCCcccEEEEEEecCCccceeecccCCCCcceeEEec
Q 016833 109 RNVICTKCKGKGSKSGA---SMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 167 (382)
Q Consensus 109 r~~~C~~C~G~G~~~~~---~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 167 (382)
+.+.|..|...|-.... ...|-.|...|.+...... | .....|-.|...|.+-.
T Consensus 4 k~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~-p----~~~~~CYnCG~~GH~~r 60 (83)
T 3nyb_B 4 KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVL-P----FHTIYCYNCGGKGHFGD 60 (83)
T ss_dssp ---CCSSSCCSSSCGGGCGGGTCCCCBC------------------CCCBCSSSSCBSSCGG
T ss_pred ccCCCCCCCCCCCccccCCCcccccccccCCcccccccC-C----CCCCeecccCCCCcCcc
Confidence 45789999999866542 2368889888865432211 1 12467999999997653
No 69
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=23.83 E-value=34 Score=37.45 Aligned_cols=33 Identities=27% Similarity=0.699 Sum_probs=21.5
Q ss_pred cCCCCCcccEEEEEEecCCccceeecccCCCCcceeE
Q 016833 128 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE 164 (382)
Q Consensus 128 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 164 (382)
.|+.|.|.|.+....+.- .....+|..|+|+..
T Consensus 755 rC~~C~g~G~i~~em~fl----~~v~~~ce~c~G~r~ 787 (972)
T 2r6f_A 755 RCEACHGDGIIKIEMHFL----PDVYVPCEVCHGKRY 787 (972)
T ss_dssp BCTTTTTCSEEEECCSSS----CCEEEECTTTTTCCB
T ss_pred cccccccccceeeehhcc----ccccccccccccccc
Confidence 599999999875433222 233567888887653
No 70
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=23.58 E-value=36 Score=33.38 Aligned_cols=36 Identities=17% Similarity=0.321 Sum_probs=21.3
Q ss_pred ccCCCCCcccEEEEEE-ecC-CccceeecccCCCCcce
Q 016833 127 MKCSGCQGSGMKVSIR-HLG-PSMIQQMQHPCNECKGT 162 (382)
Q Consensus 127 ~~C~~C~G~G~~~~~~-~~g-pg~~~~~~~~C~~C~G~ 162 (382)
..|+.|+..|...... .+. ++=+--+...|+.|+=+
T Consensus 13 s~Cp~C~~~g~t~~~~~~IP~F~eVii~Sf~C~~CGyr 50 (404)
T 2qkd_A 13 SLCMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHCGWN 50 (404)
T ss_dssp EECTTTSSEEEEEEEEEEETTTEEEEEEEEECTTTCCE
T ss_pred ccCCCCCCCceEEEEEEcCCCCceEEEEEEECCCCCCc
Confidence 5688888888754332 332 22233456678888755
No 71
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.28 E-value=2.7e+02 Score=21.85 Aligned_cols=62 Identities=11% Similarity=0.190 Sum_probs=36.2
Q ss_pred HhCCCEEEEEecCCcEEEEEeCCCcc-----ccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHh
Q 016833 248 ALCGFQFVITHLDGRQLLIKSQPGEV-----VKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV 322 (382)
Q Consensus 248 Al~G~~~~i~tldG~~l~i~~p~g~v-----i~~g~~~~i~g~GmP~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~ 322 (382)
+|-+..+.|...||..+...+| |.. |.+|+.+.|.=. | +. ...+|+++-+ ++++|...|++.
T Consensus 24 ~lgn~~f~V~l~nG~~~la~i~-GK~Rk~IwI~~GD~VlVe~~--~-yd-~~~kg~Iv~r--------~~~~qvk~L~k~ 90 (111)
T 2dgy_A 24 TPGNNLHEVETAQGQRFLVSMP-SKYRKNIWIKRGDFLIVDPI--E-EG-EKVKAEISFV--------LCKDHVRSLQKE 90 (111)
T ss_dssp CCSSSEEEEECTTSCEEEEECC-TTCCSCCCCCSSCEEEEEEC--S-SC-SSCCEEEEEE--------CCHHHHHHHHHH
T ss_pred eCCCCEEEEEeCCCCEEEEEec-hhhcccEEEcCCCEEEEEec--c-cC-CcceEEEEEE--------eCHHHHHHHHHc
Confidence 4444567777778877666665 432 556776666511 1 11 1235665544 468888888764
No 72
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=22.50 E-value=10 Score=33.12 Aligned_cols=12 Identities=8% Similarity=0.282 Sum_probs=11.1
Q ss_pred cchhhhcCCCCC
Q 016833 12 TKYYEILGVSKK 23 (382)
Q Consensus 12 ~~~Y~iLgv~~~ 23 (382)
.+||+||||+++
T Consensus 117 ~d~Y~vLgv~~~ 128 (182)
T 1n4c_A 117 ETKWKPVGMADL 128 (182)
T ss_dssp CCCCCCCCGGGG
T ss_pred cchhhcCCCCCC
Confidence 689999999988
No 73
>1ear_A Urease accessory protein UREE; chaperone, putative NI-chaperone, urease operon; 1.7A {Bacillus pasteurii} SCOP: b.107.1.1 d.58.38.1 PDB: 1eb0_A
Probab=21.51 E-value=1.4e+02 Score=24.56 Aligned_cols=44 Identities=9% Similarity=-0.000 Sum_probs=35.0
Q ss_pred eeccCHHHHhCCCEEEEEecCCcEEEEEeCCCccccCCcEEEEcC
Q 016833 240 EHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND 284 (382)
Q Consensus 240 ~~~I~l~eAl~G~~~~i~tldG~~l~i~~p~g~vi~~g~~~~i~g 284 (382)
++.++..+.. =....+.|-+|+.+-|.+|.+..+++|+++....
T Consensus 22 ~v~L~~~~r~-k~R~r~~t~~G~e~~l~L~r~~~L~dGDvL~~dd 65 (147)
T 1ear_A 22 WLEVEWEDLN-KRILRKETENGTDIAIKLENSGTLRYGDVLYESD 65 (147)
T ss_dssp EEEECGGGGG-CSEEEEECTTCCEEEEECSSCCCCCTTEEEEECS
T ss_pred EEEeCHHHHh-cceeEEECCCCCEEEEECCCCcccCCCCEEEECC
Confidence 4566665553 3467888999999999999999999999997764
No 74
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=20.17 E-value=2.1e+02 Score=23.87 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=34.7
Q ss_pred HhCCCEEEEEecCCc-EEEEEeCCCccccCCcEEEEcCCCCCCCCCCCCCCcEEE
Q 016833 248 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 301 (382)
Q Consensus 248 Al~G~~~~i~tldG~-~l~i~~p~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~i 301 (382)
.|-|+++.= ..||. .+..+.|++.+++||..++|-..+.-....+ -.||+.
T Consensus 63 ~L~GW~L~r-~vdg~~~~~y~Fp~~~~L~pg~tVtIws~~~g~~~~p--p~dlv~ 114 (151)
T 1ufg_A 63 SMGNWQIRR-QNGDDPLMTYRFPPKFTLKAGQVVTIWASGAGATHSP--PTDLVW 114 (151)
T ss_dssp ECSSCEEEE-EETTSCCEEEECCTTCEECTTCEEEEEESSSSCCCCT--TTEEEE
T ss_pred ccCCCEEEE-ecCCCccEEEEECCCcEECCCCEEEEEeCCCCCCCCC--chhEEE
Confidence 566777653 24654 3788899999999999999998875322222 356654
No 75
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=20.15 E-value=51 Score=25.03 Aligned_cols=21 Identities=19% Similarity=0.398 Sum_probs=18.1
Q ss_pred EEECCCCCCHHHHHHHHHhCC
Q 016833 304 TVDFPESLSPDQCKMLETVLP 324 (382)
Q Consensus 304 ~V~~P~~l~~~~~~~l~~~lp 324 (382)
.++||..|++.+|..+-++..
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA~ 55 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIAE 55 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHHH
Confidence 678999999999999887753
Done!