BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>016836
MSRLAPLSEEPINEEEQHSNSSNGSNNTKYSSKKGLSWKHWLKNHLSLVFFINKKSDLKT
LLSVLGCPLFPVPLLPKQPLNQVCSSAQYIIQHFTAATGCRKLEGRVKNIFATGKVTMGM
GDDFGGSAGSVPVAGAGASASLGGVSEKGCFVMWQMVPNKWLIELVVGGHKVVAGSDGNF
AWRHTPWLGSHAAKGSVRPLRRALQGLDPIAVASVFSTAQYVGEKRISDIDCFVLKLAAN
QTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGTQPTYWETTMATKIE
DYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEETWTIDDLAFNVAGLSLDCFIPP
KEVQKDSYPVDENLDWRSPLR

High Scoring Gene Products

Symbol, full name Information P value
AT5G06610 protein from Arabidopsis thaliana 4.6e-121
AT3G19540 protein from Arabidopsis thaliana 4.5e-82
AT1G27690 protein from Arabidopsis thaliana 2.0e-81
AT1G79420 protein from Arabidopsis thaliana 1.4e-78
AT1G49840 protein from Arabidopsis thaliana 4.8e-78
AT5G05840 protein from Arabidopsis thaliana 2.4e-69
AT3G55720 protein from Arabidopsis thaliana 3.0e-53
AT5G66740 protein from Arabidopsis thaliana 2.1e-52
AT1G75160 protein from Arabidopsis thaliana 2.4e-51

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  016836
        (381 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2144128 - symbol:AT5G06610 "AT5G06610" species...  1191  4.6e-121  1
TAIR|locus:2101510 - symbol:AT3G19540 "AT3G19540" species...   823  4.5e-82   1
TAIR|locus:2199191 - symbol:AT1G27690 "AT1G27690" species...   817  2.0e-81   1
TAIR|locus:2206425 - symbol:AT1G79420 "AT1G79420" species...   790  1.4e-78   1
TAIR|locus:2007268 - symbol:AT1G49840 "AT1G49840" species...   785  4.8e-78   1
TAIR|locus:2166414 - symbol:AT5G05840 "AT5G05840" species...   703  2.4e-69   1
TAIR|locus:2078946 - symbol:AT3G55720 "AT3G55720" species...   551  3.0e-53   1
TAIR|locus:2173634 - symbol:AT5G66740 "AT5G66740" species...   543  2.1e-52   1
TAIR|locus:2025207 - symbol:AT1G75160 "AT1G75160" species...   533  2.4e-51   1


>TAIR|locus:2144128 [details] [associations]
            symbol:AT5G06610 "AT5G06610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 EMBL:AP002543 InterPro:IPR006873
            Pfam:PF04788 EMBL:AF370524 EMBL:AY081470 IPI:IPI00540715
            RefSeq:NP_196279.1 UniGene:At.9068 DNASU:830549
            EnsemblPlants:AT5G06610.1 GeneID:830549 KEGG:ath:AT5G06610
            TAIR:At5g06610 InParanoid:Q9FG09 OMA:PTYWETS PhylomeDB:Q9FG09
            ProtClustDB:CLSN2686883 ArrayExpress:Q9FG09 Genevestigator:Q9FG09
            Uniprot:Q9FG09
        Length = 368

 Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
 Identities = 232/373 (62%), Positives = 277/373 (74%)

Query:     1 MSRLAPLSEEPINEEEQHSNSSNGSNNTKYSSKKGLSWKHWLKNHLSLVFFINKKSDLKT 60
             M RLAPL EEPI+EE+Q         +T+  SK   SWK W+K  L  + F  KK D+K 
Sbjct:     1 MQRLAPLMEEPIDEEDQEEERGGRKGSTR--SK---SWKKWIKTQLQFIVF-PKKPDMKL 54

Query:    61 LLSVLGCPLFPVPLLPKQPLNQVCSSAQYIIQHFTAATGCRKLEGRVKNIFATGKVTMGM 120
             LLSV+GCPLFPVP L K  L QV SSAQYIIQ F AATGC+KL G +KN F TGK+TM M
Sbjct:    55 LLSVMGCPLFPVPPLSKISLQQVSSSAQYIIQQFAAATGCKKLAGEIKNTFVTGKITMTM 114

Query:   121 GDDFXXXXXXXXXXXXXXXXXXXXXXEKGCFVMWQMVPNKWLIELVVGGHKVVAGSDGNF 180
               D                        KGCFVMWQM+P KWLIELV GGHKV AGSDG  
Sbjct:   115 VSDINSSTAVSSASSVS---------HKGCFVMWQMLPEKWLIELVGGGHKVSAGSDGEI 165

Query:   181 AWRHTPWLGSHAAKGSVRPLRRALQGLDPIAVASVFSTAQYVGEKRISDIDCFVLKLAAN 240
              WR+TPWLG HAAKG++RPLRRALQGLDP+ ++SVFS+AQ+VGEK I+  DCF+LKL+ +
Sbjct:   166 TWRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFVGEKEINGKDCFILKLSTD 225

Query:   241 QTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGTQPTYWETTMATKIE 300
             Q DL+ RSDSTAEMIKHV FGYFSQ+SGLL+ LEDS LTRIQ PGT PTYWET+M++ +E
Sbjct:   226 QIDLSKRSDSTAEMIKHVAFGYFSQKSGLLICLEDSSLTRIQIPGTVPTYWETSMSSWME 285

Query:   301 DYRAIEG--VMIAHSGQSSVIITRFGDNLKAGLSITRMEETWTIDDLAFNVAGLSLDCFI 358
             DYRAIEG  V+IAHSG++ V+I+RFG+ LK G+S+TRMEE WTIDD+AF+V GLS+DCFI
Sbjct:   286 DYRAIEGSEVVIAHSGKTDVLISRFGETLKGGISVTRMEEKWTIDDVAFDVPGLSVDCFI 345

Query:   359 PPKEVQKDSYPVD 371
             PPKE++ D +  D
Sbjct:   346 PPKEMKMDFHHQD 358


>TAIR|locus:2101510 [details] [associations]
            symbol:AT3G19540 "AT3G19540" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP002065
            InterPro:IPR006873 Pfam:PF04788 HOGENOM:HOG000239944
            ProtClustDB:CLSN2682692 EMBL:AY054261 EMBL:AY133526 IPI:IPI00541094
            RefSeq:NP_566642.1 UniGene:At.21232 IntAct:Q9LH41
            EnsemblPlants:AT3G19540.1 GeneID:821490 KEGG:ath:AT3G19540
            TAIR:At3g19540 eggNOG:NOG331709 InParanoid:Q9LH41 OMA:AKCIGEK
            PhylomeDB:Q9LH41 Genevestigator:Q9LH41 Uniprot:Q9LH41
        Length = 485

 Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
 Identities = 170/377 (45%), Positives = 233/377 (61%)

Query:     4 LAPLSEEPINEEEQHSNSSNGSNNTKYSSKKGLSWKHWLKNHLSLVFFIN-----KKSDL 58
             L P+ E P  +E        G  N   S + G    HW+K  LS    +      +++DL
Sbjct:    77 LRPVMEGPDPDE------GGGGGNIGESKRLGSGLGHWVKGQLSRAPSVAATAAYRRNDL 130

Query:    59 KTLLSVLGCPLFPVPLLPKQPLNQVC--------SSAQYIIQHFTAATGCRKLEGRVKNI 110
             + LL V+G PL P+ +    PL  +         SSAQYI+Q +TAA+G +KL+  +KN 
Sbjct:   131 RLLLGVMGAPLAPIHVSSSDPLPHLSIKNTPIETSSAQYILQQYTAASGGQKLQNSIKNA 190

Query:   111 FATGKVTMGMGDDFXXXXXXXXXXXXXXXXXXXXXXEKGCFVMWQMVPNKWLIELVVGGH 170
             +A GK+ M                            E G FV+WQM P+ W +EL VGG 
Sbjct:   191 YAMGKLKM--------ITSELETATRTVRNRNPSKAETGGFVLWQMNPDMWYVELAVGGS 242

Query:   171 KVVAGSDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIAVASVFSTAQYVGEKRISDI 230
             KV AG +G   WRHTPWLGSH AKG VRPLRR LQGLDP   A++F+ A+ +GEK+++  
Sbjct:   243 KVRAGCNGKLVWRHTPWLGSHTAKGPVRPLRRGLQGLDPRTTAAMFAEAKCIGEKKVNGE 302

Query:   231 DCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGTQPTY 290
             DCF+LKL  +   L  RS+  AE+I+HV+FGYFSQ++GLLV++EDS+LTRIQS G +  +
Sbjct:   303 DCFILKLCTDPETLKARSEGPAEIIRHVLFGYFSQKTGLLVHIEDSHLTRIQSNGGETVF 362

Query:   291 WETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEETWTIDDLAFNVA 350
             WETT  + ++DYR +EG+MIAHSG S V + RFG+ +    + T+MEE+WTI+++AFNV 
Sbjct:   363 WETTYNSSLDDYRQVEGIMIAHSGHSVVTLFRFGE-VATSHTRTKMEESWTIEEVAFNVP 421

Query:   351 GLSLDCFIPPKEVQKDS 367
             GLSLDCFIPP +++  S
Sbjct:   422 GLSLDCFIPPADLKTGS 438


>TAIR|locus:2199191 [details] [associations]
            symbol:AT1G27690 "AT1G27690" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] EMBL:CP002684
            GenomeReviews:CT485782_GR InterPro:IPR006873 Pfam:PF04788
            EMBL:AY091035 EMBL:AY117319 IPI:IPI00525253 RefSeq:NP_564291.1
            UniGene:At.23841 IntAct:Q8RWY0 PaxDb:Q8RWY0 PRIDE:Q8RWY0
            EnsemblPlants:AT1G27690.1 GeneID:839661 KEGG:ath:AT1G27690
            TAIR:At1g27690 eggNOG:NOG291292 HOGENOM:HOG000239944 OMA:SISETCE
            PhylomeDB:Q8RWY0 ProtClustDB:CLSN2917078 Genevestigator:Q8RWY0
            Uniprot:Q8RWY0
        Length = 433

 Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
 Identities = 174/382 (45%), Positives = 236/382 (61%)

Query:     4 LAPLSEEPINEEEQHSNSSNGSNNTKYSSKKGLSWKHWLKNHLSL----VFFIN--KKSD 57
             LAP+ E P  + E   +S + S   ++  +    W +W+K  L +    V   +  K++D
Sbjct:    49 LAPVIEGPDPDAEDSGSSGDYS---RFERR----WYNWMKCQLPVAPPSVSSSSDFKRTD 101

Query:    58 LKTLLSVLGCPLFPV-----PLLPKQPLNQV---CSSAQYIIQHFTAATGCRKLEGRVKN 109
             L+ LL VLG PL PV      LLP   +       SSAQYI+Q +TAA+G +KL   V+N
Sbjct:   102 LRLLLGVLGAPLGPVHVSALDLLPHLSIKNTPMETSSAQYILQQYTAASGGQKLHSSVQN 161

Query:   110 IFATGKVTMGMGDDFXXXXXXXXXXXXXXXXXXXXXXEKGCFVMWQMVPNKWLIELVVGG 169
              +  G++   M  +F                      E G FV+W M P+ W +ELV+GG
Sbjct:   162 GYVMGRIRT-MASEFETGSKGSKSKNNSSKAV-----ESGGFVLWHMNPDMWYMELVLGG 215

Query:   170 HKVVAGSDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIAVASVFSTAQYVGEKRISD 229
              KV+AG DG   WRHTPWLG HAAKG VRPLRRALQGLDP   A +F+ A+ +GEK+I  
Sbjct:   216 SKVLAGCDGKLVWRHTPWLGPHAAKGPVRPLRRALQGLDPRTTAYMFANARCIGEKKIDG 275

Query:   230 IDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGTQPT 289
              DCF+LKL A+   L  RS+  +E I+H +FGYFSQ++GLLV+LEDS LTRIQ+ G +  
Sbjct:   276 EDCFILKLCADPATLKARSEGASETIRHTLFGYFSQKTGLLVHLEDSQLTRIQNNGGEAV 335

Query:   290 YWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEETWTIDDLAFNV 349
             YWETT+ + +EDY+ +EG+MIAHSG+S   + RFGD      + T M+E W ID+++FNV
Sbjct:   336 YWETTINSYLEDYKPVEGIMIAHSGRSVATLLRFGDMSSGHNTKTTMQEAWVIDEISFNV 395

Query:   350 AGLSLDCFIPPKEVQKDSYPVD 371
              GLS+DCFIPP E++ DS+  D
Sbjct:   396 PGLSIDCFIPPSELRFDSHVED 417


>TAIR|locus:2206425 [details] [associations]
            symbol:AT1G79420 "AT1G79420" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009855 "determination of bilateral symmetry"
            evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
            [GO:0010014 "meristem initiation" evidence=RCA] [GO:0010051 "xylem
            and phloem pattern formation" evidence=RCA] [GO:0010073 "meristem
            maintenance" evidence=RCA] [GO:0048439 "flower morphogenesis"
            evidence=RCA] [GO:0048519 "negative regulation of biological
            process" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR006873 Pfam:PF04788 HOGENOM:HOG000239944 EMBL:AY052727
            EMBL:AY142071 IPI:IPI00540727 RefSeq:NP_565208.1 UniGene:At.26480
            IntAct:Q940T0 EnsemblPlants:AT1G79420.1 GeneID:844280
            KEGG:ath:AT1G79420 TAIR:At1g79420 eggNOG:NOG248164
            InParanoid:Q940T0 OMA:WETTIGT PhylomeDB:Q940T0
            ProtClustDB:CLSN2689326 Genevestigator:Q940T0 Uniprot:Q940T0
        Length = 417

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 162/339 (47%), Positives = 215/339 (63%)

Query:    54 KKSDLKTLLSVLGCPLFPVP-----LLPKQPLN---QV------CSSAQYIIQHFTAATG 99
             K  DL+ LL VLGCPL P+      L P  PL    Q+       S+A YIIQ + AATG
Sbjct:    76 KGQDLRLLLGVLGCPLAPISVVVSDLFPDDPLLGSFQIKNVPFETSTAHYIIQQYLAATG 135

Query:   100 CRKLEGRVKNIFATGKVTMGMGDDFXXXXXXXXXXXXXXXXXXXXXXEKGCFVMWQMVPN 159
             C K     KN++ATG + M   +                        + GCFV+WQM P 
Sbjct:   136 CLKRAKAAKNMYATGIMKMSCCE---TEIAAGKSVKTLGGGGNGRSGDSGCFVLWQMQPG 192

Query:   160 KWLIELVVGGHKVVAGSDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIAVASVFSTA 219
              W +ELV+GG K+++GSDG   WRHTPWLG+HAAKG  RPLRR +QGLDP   AS+F+ A
Sbjct:   193 MWSLELVLGGTKLISGSDGKTVWRHTPWLGTHAAKGPQRPLRRLIQGLDPKTTASLFAKA 252

Query:   220 QYVGEKRISDIDCFVLKLAANQTDLADRSDS--TAEMIKHVIFGYFSQRSGLLVYLEDSY 277
             Q +GE+RI D DCFVLK++A++  L +R+D+   AE+I+H ++GYF Q+SGLLVYLEDS+
Sbjct:   253 QCLGERRIGDDDCFVLKVSADRDSLLERNDAGAPAEVIRHALYGYFCQKSGLLVYLEDSH 312

Query:   278 LTRIQ--SPGTQPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITR 335
             LTR+   SP  +  YWETT+ T I DYR ++GV +AH G++   + RFG+      S TR
Sbjct:   313 LTRVMTISPEDEAVYWETTIGTSIGDYRDVDGVAVAHCGRAVATVFRFGET-SLQYSRTR 371

Query:   336 MEETWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDENL 374
             MEE W IDD+ F+V GLSLD FIPP ++ +D+ P + N+
Sbjct:   372 MEEIWRIDDVVFDVPGLSLDSFIPPADIFEDTNPNNNNI 410


>TAIR|locus:2007268 [details] [associations]
            symbol:AT1G49840 "AT1G49840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC079674
            InterPro:IPR006873 Pfam:PF04788 HOGENOM:HOG000239944 EMBL:AY065417
            EMBL:AY091246 EMBL:AK228530 IPI:IPI00520092 PIR:C96535
            RefSeq:NP_175406.1 UniGene:At.28492 IntAct:Q9C6D0 PaxDb:Q9C6D0
            PRIDE:Q9C6D0 EnsemblPlants:AT1G49840.1 GeneID:841407
            KEGG:ath:AT1G49840 TAIR:At1g49840 eggNOG:NOG295513
            InParanoid:Q9C6D0 OMA:TRIQSND PhylomeDB:Q9C6D0
            ProtClustDB:CLSN2682692 ArrayExpress:Q9C6D0 Genevestigator:Q9C6D0
            Uniprot:Q9C6D0
        Length = 494

 Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
 Identities = 168/380 (44%), Positives = 230/380 (60%)

Query:     2 SRLAPLSEEPINEEEQHSNSSNGSNNTKYSSKKGLSWKHWLKNHLSLVFFIN------KK 55
             S L P+ E P    +  +   +G ++ +  S  GLS  HW+K   S    +       +K
Sbjct:    84 SSLRPVMEGP----DPDNGEVSGVDSKRLGS--GLS--HWVKGQWSRAPSVTSTTPAYRK 135

Query:    56 SDLKTLLSVLGCPLFPVPLLPKQPLNQVC--------SSAQYIIQHFTAATGCRKLEGRV 107
             SDL+ LL V+G PL P+ +     L  +         SSAQYI+Q +TAA G  KL   +
Sbjct:   136 SDLRLLLGVMGAPLAPINVSSSSHLLHLTIRDSPTETSSAQYILQQYTAACGGHKLHNAI 195

Query:   108 KNIFATGKVTMGMGDDFXXXXXXXXXXXXXXXXXXXXXXEKGCFVMWQMVPNKWLIELVV 167
             KN +A GK+ M                            E G FV+WQM P+ W +EL V
Sbjct:   196 KNAYAMGKLKM--------ITSELETPTGTVRNRNSTKSETGGFVLWQMNPDMWYVELSV 247

Query:   168 GGHKVVAGSDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIAVASVFSTAQYVGEKRI 227
             GG KV AG +G   WRHTPWLGSH AKG VRPLRRALQGLDP   A++F+ ++ VGE+++
Sbjct:   248 GGSKVRAGCNGKLVWRHTPWLGSHTAKGPVRPLRRALQGLDPRTTATMFAESKCVGERKV 307

Query:   228 SDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGTQ 287
             +  DCF+LKL  +   L  RS+  AE+++H++FGYFSQR+GLL  +EDS LTRIQS    
Sbjct:   308 NGEDCFILKLCTDPETLRARSEGPAEIVRHILFGYFSQRTGLLAQIEDSQLTRIQSNDGD 367

Query:   288 PTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEETWTIDDLAF 347
               YWETT+ + ++DY+ +EG+MIAHSG+S V + RFG+ +    + T+MEE WTI+++AF
Sbjct:   368 AVYWETTINSSLDDYKQVEGIMIAHSGRSVVTLFRFGE-VAMSHTRTKMEERWTIEEVAF 426

Query:   348 NVAGLSLDCFIPPKEVQKDS 367
             NV GLSLDCFIPP +++  S
Sbjct:   427 NVPGLSLDCFIPPADLRSGS 446


>TAIR|locus:2166414 [details] [associations]
            symbol:AT5G05840 "AT5G05840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 EMBL:AB005237 InterPro:IPR006873
            Pfam:PF04788 IPI:IPI00530609 RefSeq:NP_196203.1 UniGene:At.51050
            UniGene:At.66662 PRIDE:Q9FFJ4 EnsemblPlants:AT5G05840.1
            GeneID:830469 KEGG:ath:AT5G05840 TAIR:At5g05840 InParanoid:Q9FFJ4
            OMA:FRFGENS PhylomeDB:Q9FFJ4 ProtClustDB:CLSN2686670
            Genevestigator:Q9FFJ4 Uniprot:Q9FFJ4
        Length = 439

 Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
 Identities = 142/335 (42%), Positives = 209/335 (62%)

Query:    51 FINKKSDLKTLLSVLGCPLFPVPLLP------KQPLNQ-------VCSSAQYIIQHFTAA 97
             F  + ++++ LL V+G PL P+P+ P      + P+++         S AQYI++ + AA
Sbjct:    63 FGGRNAEIQLLLGVVGAPLIPLPVQPDHHNDYENPIHKDIKDQPLEMSMAQYIVKQYIAA 122

Query:    98 TGCRKLEGRVKNIFATGKVTMGMGDDFXXXXXXXXXXXXXXXXXXXXXXEKGCFVMWQMV 157
              G  +    V++++A GKV M    +F                      E G FV+WQ  
Sbjct:   123 VGGDRALNAVESMYAMGKVRM-TASEFCTGEGSLNSKMVKARSIKSGGGEVGGFVLWQKG 181

Query:   158 PNKWLIELVVGGHKVVAGSDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIAVASVFS 217
                W +ELVV G K+ AGSD   AWR TPW  SHA++G  RPLRR LQGLDP + A++F+
Sbjct:   182 IELWCLELVVSGCKISAGSDAKVAWRQTPWHPSHASRGPPRPLRRFLQGLDPKSTANLFA 241

Query:   218 TAQYVGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSY 277
              +  +GEK+I+D DCF+LKL A  + L  RS S  E+I+H ++G FSQR+GLL+ LEDS+
Sbjct:   242 RSVCMGEKKINDEDCFILKLDAEPSALKARSSSNVEIIRHTVWGCFSQRTGLLIQLEDSH 301

Query:   278 LTRIQSPGTQPTYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRME 337
             L RI++      +WETTM + I+DYR ++G+++AH+G+SSV + RFG+N     S TRME
Sbjct:   302 LLRIKAQDDNSIFWETTMESLIQDYRTVDGILVAHAGKSSVSLFRFGEN-SDNHSRTRME 360

Query:   338 ETWTIDDLAFNVAGLSLDCFIPPKEVQKDSYPVDE 372
             ETW I+++ FN+ GLS+DCF+PP +++KD    +E
Sbjct:   361 ETWEIEEMDFNIKGLSMDCFLPPSDLKKDDDEEEE 395


>TAIR|locus:2078946 [details] [associations]
            symbol:AT3G55720 "AT3G55720" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0080167 "response to karrikin"
            evidence=IEP] [GO:0009855 "determination of bilateral symmetry"
            evidence=RCA] [GO:0009944 "polarity specification of
            adaxial/abaxial axis" evidence=RCA] [GO:0010014 "meristem
            initiation" evidence=RCA] [GO:0010075 "regulation of meristem
            growth" evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
            [GO:0044036 "cell wall macromolecule metabolic process"
            evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0080167
            EMBL:AL161667 InterPro:IPR006873 Pfam:PF04788 HOGENOM:HOG000239944
            IPI:IPI00539487 PIR:T47711 RefSeq:NP_191131.1 UniGene:At.34996
            EnsemblPlants:AT3G55720.1 GeneID:824738 KEGG:ath:AT3G55720
            TAIR:At3g55720 eggNOG:NOG307163 OMA:SHASNEP PhylomeDB:Q9M050
            ProtClustDB:CLSN2913347 Genevestigator:Q9M050 Uniprot:Q9M050
        Length = 438

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 122/294 (41%), Positives = 175/294 (59%)

Query:    81 NQVCSSA--QYIIQHFTAATGCRKLEGRVKNIFATGKVTMGMGD-----DFXXXXXXXXX 133
             NQ   SA  +YI++ +TAA G       V++++A GKV MG+ +                
Sbjct:    99 NQSIESAMAKYIVKQYTAAAGGEMALDAVESMYAMGKVKMGVTEFCAAKTLNGKRKKKMV 158

Query:   134 XXXXXXXXXXXXXEKGCFVMWQMVPNKWLIELVVGGHKVVAGSDGNFAWRHTPWLG-SHA 192
                          E G FV+W+   ++W +ELVV G KV AG DGN  WR +PWL  SHA
Sbjct:   159 RIRNVNNNNGNGGEMGGFVLWKKGSSQWSLELVVSGCKVSAGCDGNVDWRQSPWLAHSHA 218

Query:   193 AKGSVRPLRRALQGLDPIAVASVFSTAQYVGEKRISDIDCFVLKLAANQTDLADRSDSTA 252
             +     PLRR LQGLDP   A++F+ +  VGEK +++ +CFVLKL    + L  RS S  
Sbjct:   219 SNEPSGPLRRFLQGLDPKTTANLFAGSVCVGEKAVNNEECFVLKLETQPSGLKSRSKSGM 278

Query:   253 EMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGTQP---TYWETTMATKIEDYRAIEGVM 309
             E +KH ++G F QR+GLLV LED+YL RI++ G +      WETT  T I+DY++I+G+ 
Sbjct:   279 ETVKHTVWGCFGQRTGLLVQLEDTYLVRIKT-GLEDEDMVLWETTSETLIQDYKSIDGIQ 337

Query:   310 IAHSGQSSVIITRFGDNLKAGLSITRMEETWTIDDLAFNVAGLSLDCFIPPKEV 363
             IAH G++ V + R  ++L++  S T MEE+W I+++ FNV GLS D F+PP ++
Sbjct:   338 IAHRGKTRVSLLRLDESLESH-SKTTMEESWEIEEVGFNVKGLSSDFFLPPGDL 390


>TAIR|locus:2173634 [details] [associations]
            symbol:AT5G66740 "AT5G66740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009827 "plant-type cell wall modification"
            evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
            EMBL:CP002688 InterPro:IPR006873 Pfam:PF04788 IPI:IPI00544291
            RefSeq:NP_201475.4 UniGene:At.55716 PRIDE:F4K243 DNASU:836807
            EnsemblPlants:AT5G66740.1 GeneID:836807 KEGG:ath:AT5G66740
            OMA:VSGCKVI ArrayExpress:F4K243 Uniprot:F4K243
        Length = 370

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 134/370 (36%), Positives = 202/370 (54%)

Query:     4 LAPLSEEPINEEEQHSNSSNGSNNTKYSSKKGLSW-KHWLKNHLSLVFFINKKSDLKTLL 62
             L  + E PI EE      S   NN     +  ++W K    +  S      + ++L+ LL
Sbjct:    14 LETVLEVPIPEEM----FSGMGNNVALRWQNMMTWMKAQTSDKWSQPLIAARINELRFLL 69

Query:    63 SVLGCPLFPVPLL-------PKQPLNQVCSSAQYIIQHFTAATGCRKLEGRVKNIFATGK 115
              ++G PL P+ +        P +  +   S+A+YI+Q + AATG  +    V ++  TG+
Sbjct:    70 YLVGSPLIPLQVQVGHSVHKPVKDCSIQASTAKYIVQQYIAATGGPQALNAVNSMCVTGQ 129

Query:   116 VTMGMGDDFXXXXXXXXXXXXXXXXXXXXXXEKGCFVMWQMVPNKWLIELVVGGHKVVAG 175
             V M    +F                      E G FV+WQ  P+ W +ELVV G KV+ G
Sbjct:   130 VKM-TASEFHQGDDSGVNLKSND--------EMGGFVLWQKDPDLWCLELVVSGCKVICG 180

Query:   176 SDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIAVASVFSTAQYVGEKRISDIDCFVL 235
             S+G  +WRH+    + A+ G+ RPLRR LQGLDP + A++F  A  +GEK I+  DCF+L
Sbjct:   181 SNGRLSWRHSSNQQTPASTGTPRPLRRFLQGLDPRSTANLFLDATCIGEKIINGEDCFIL 240

Query:   236 KLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGTQPTYWETTM 295
             KL  +      +S    E+I H I+GYFSQRSGLL+  EDS L R+++   +  +WET+ 
Sbjct:   241 KLETSPAVREAQSGPNFEIIHHTIWGYFSQRSGLLIQFEDSRLLRMRTKEDEDVFWETSA 300

Query:   296 ATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITR-MEETWTIDDLAFNVAGLSL 354
              + ++DYR ++ V IAH G++SV + R+G+   A  +  R M E W I+++ FNV GLS+
Sbjct:   301 ESVMDDYRYVDNVNIAHGGKTSVTVFRYGE---ASANHRRQMTEKWRIEEVDFNVWGLSV 357

Query:   355 DCFIPPKEVQ 364
             D F+PP  +Q
Sbjct:   358 DHFLPPANLQ 367


>TAIR|locus:2025207 [details] [associations]
            symbol:AT1G75160 "AT1G75160" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0048610 "cellular process involved in
            reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
            evidence=RCA] EMBL:CP002684 IPI:IPI00523183 RefSeq:NP_177652.2
            UniGene:At.34808 EnsemblPlants:AT1G75160.1 GeneID:843853
            KEGG:ath:AT1G75160 OMA:TDYFLPP InterPro:IPR006873 Pfam:PF04788
            Uniprot:F4HXG1
        Length = 395

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 124/326 (38%), Positives = 177/326 (54%)

Query:    52 INKKSDLK--TLLSVLGCPLFP--VPL--LPKQPLNQV---CSSAQYIIQHFTAATGCRK 102
             +  KSD +   LL ++G PL P  VPL     +P+N      S+A+YI+Q + AA G   
Sbjct:    76 LQSKSDNEFVALLKIVGSPLIPFHVPLEFCLSRPINDTSIEASTAKYIVQQYVAACGGPT 135

Query:   103 LEGRVKNIFATGKVTMGMGDDFXXXXXXXXXXXXXXXXXXXXXXEKGCFVMWQMVPNKWL 162
                 VK+++A G+V M  G +                       E G FV+WQ  PN W 
Sbjct:   136 ALNAVKSMYAVGQVRM-QGSEMVAGEDEGTGTPVRLGKGSF---EVGGFVLWQKNPNLWF 191

Query:   163 IELVVGGHKVVAGSDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIAVASVFSTAQYV 222
             +ELVV G K+ AGSDG  AW  +    S A +G  RPLRR  QGLDP   AS+F  A  +
Sbjct:   192 LELVVSGFKISAGSDGKVAWNQSSTQPSQAHRGPPRPLRRFFQGLDPRCTASLFLDAVCI 251

Query:   223 GEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQ 282
             GE+ ++  DCFVLK+      L  +     E+I H ++GYFSQR+GLLV   D+ L R++
Sbjct:   252 GEQPVNGEDCFVLKVETPSDILKAQCSPNTEVIHHTVWGYFSQRTGLLVKFGDTKLVRVK 311

Query:   283 SP-GTQP-TYWETTMATKIEDYRAIEGVMIAHSGQSSVIITRFGDNLKAGLSITRMEETW 340
             S  G     +WET+M + I+DY  ++ V IAH GQ+   + R+G  +       R+EE W
Sbjct:   312 SGRGKNDGVFWETSMESIIDDYIFVDAVNIAHGGQTVTTLYRYGGAVNHR---RRIEEKW 368

Query:   341 TIDDLAFNVAGLSLDCFIPPKEVQKD 366
              I+++ FN+ GL L+ F+PP ++  D
Sbjct:   369 RIEEVDFNICGLCLESFLPPSDINND 394


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      381       359   0.00081  117 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  260 KB (2137 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.70u 0.11s 28.81t   Elapsed:  00:00:01
  Total cpu time:  28.70u 0.11s 28.81t   Elapsed:  00:00:01
  Start:  Tue May 21 01:49:50 2013   End:  Tue May 21 01:49:51 2013

Back to top