Query 016836
Match_columns 381
No_of_seqs 90 out of 92
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 04:35:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016836.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016836hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3buu_A Uncharacterized LOLA su 97.8 0.00082 2.8E-08 58.7 15.3 208 85-361 7-224 (229)
2 3bk5_A Putative outer membrane 97.5 0.0045 1.5E-07 54.6 16.0 209 86-359 5-232 (237)
3 2yzy_A Putative uncharacterize 68.6 3.6 0.00012 36.2 3.5 67 168-241 64-139 (200)
4 3m4w_A Sigma-E factor regulato 66.0 5.6 0.00019 37.7 4.5 57 206-275 93-149 (295)
5 3tu8_A Burkholderia lethal fac 58.6 4.4 0.00015 36.5 2.1 25 158-183 81-105 (210)
6 3mh9_C Lipoprotein LPRG; mutan 35.7 64 0.0022 29.3 6.0 77 162-248 75-155 (218)
7 1bte_A Protein (activin recept 19.7 73 0.0025 26.1 3.0 22 147-170 33-54 (97)
8 1svq_A Severin; actin-binding; 17.2 52 0.0018 26.5 1.6 14 225-238 34-47 (114)
9 4hg1_A Putative cytoplasmic pr 16.6 89 0.003 29.0 3.1 34 308-341 126-161 (225)
10 1kjn_A MTH0777; hypotethical p 16.6 44 0.0015 29.9 1.1 26 62-97 10-35 (157)
No 1
>3buu_A Uncharacterized LOLA superfamily protein NE2245; PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.20A {Nitrosomonas europaea atcc 19718}
Probab=97.78 E-value=0.00082 Score=58.73 Aligned_cols=208 Identities=14% Similarity=0.140 Sum_probs=117.4
Q ss_pred chhHHHHHhHhHhcCchhhcccceeeEEecceeeeeecccCCCCCcccccccCccCCCCCccccceEEEeeecCCceEEE
Q 016836 85 SSAQYIIQHFTAATGCRKLEGRVKNIFATGKVTMGMGDDFGGSAGSVPVAGAGASASLGGVSEKGCFVMWQMVPNKWLIE 164 (381)
Q Consensus 85 SsAqYIvqQy~AAtGg~k~~~~v~smyA~GkVrM~~~sE~~~~~~~v~~~~~~~~~~~~~~~e~GgFVlWQ~~Pd~W~~E 164 (381)
-+|+=|+++..++.++. ++..+..+ |... ..++ ....--+.+|.+.++.-++.
T Consensus 7 ~~a~eil~~~~~~~~~~------~~~~~~~~--~~~~---~~~~----------------~~~~~~~~~~~~~~~~~~~~ 59 (229)
T 3buu_A 7 VTAQSILEKADEIRFPQ------DSFQVNVA--IRTA---APDH----------------AEDLYRYQVLSKGNENSIVM 59 (229)
T ss_dssp CCHHHHHHHHHHHHSCS------SCEEEEEE--EEEE---ETTE----------------ECCCEEEEEEEETTTEEEEE
T ss_pred CCHHHHHHHHHhhccCC------CCeEEEEE--EEEE---cCCC----------------ceEEEEEEEEecCCceEEEE
Confidence 36888999999987753 34444433 3321 1110 01122356788888776665
Q ss_pred EE----eeCeeeeecCCCceeeecCCCCcCcccCCCCch--h----hhhhcCCCchhhhhccccceeeeeeecCCcceeE
Q 016836 165 LV----VGGHKVVAGSDGNFAWRHTPWLGSHAAKGSVRP--L----RRALQGLDPIAVASVFSTAQYVGEKRISDIDCFV 234 (381)
Q Consensus 165 Lv----V~G~KV~AGsdGkvaWR~Tpw~gsHAakGp~RP--L----RR~lQGLDPr~tA~lF~~A~ciGEk~i~gedCFi 234 (381)
+. +.|..+.. +|+-+|--.|-+..- -+=++.+ + -.-+.++++ + =.-+...+|++.|+|.+|++
T Consensus 60 ~~~P~~~~g~~~l~--~~~~~w~y~P~~~~v-~r~~~~~~~~g~~~~~d~~~~~~---~-~~y~~~l~g~~~v~g~~~~v 132 (229)
T 3buu_A 60 ITEPASERGQAILM--KGRDLWVFMPSVSQP-IRLSLSQRLTGQVANGDIARANF---T-GDYHPQLLRNESIDDEDYYV 132 (229)
T ss_dssp EEESTTTTTCEEEE--ETTEEEEECTTCSSC-EEECTTSEEETTEEHHHHHCCCS---B-TTEEEEEEEEEEETTEEEEE
T ss_pred EeCChhhcCeEEee--cCCceEEECCCCCce-EEccCcccccccccccccccCCc---c-ccCceEEeeeeeeCCeeEEE
Confidence 54 45666663 899999999876542 1111111 0 111122221 0 11234789999999999999
Q ss_pred EEeccCchhhcccCCCCceEEEeeeecccccccceeEEeecceeeeecCCCCCCeEEeeccccccccccccCceeeecCC
Q 016836 235 LKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGTQPTYWETTMATKIEDYRAIEGVMIAHSG 314 (381)
Q Consensus 235 Lkl~a~~~~l~arS~~~~EiirH~~~GYFSQrtGLLv~lEDs~Ltriqs~~~~~vyWETt~eS~i~DYR~VdGv~IAH~G 314 (381)
|++.+.... +. .=+.. =|++++|+|+++.|- +- .. .--|++.. ..+|..+||+.+++.-
T Consensus 133 l~~~pk~~~---~~-----y~k~~--lwiD~~t~~p~k~~~--~d----~~--G~l~k~~~---~~~~~~~~g~~~~~~~ 191 (229)
T 3buu_A 133 LELTGIDRS---VT-----YQKVL--LWVNQSNFRPYKAEF--YS----VS--GRLLKTSR---YENFDNILGEMRPTRI 191 (229)
T ss_dssp EEEEESSTT---SS-----CSEEE--EEEETTTCCEEEEEE--EC----TT--SCEEEEEE---EEEEEEETTEEEEEEE
T ss_pred EEEEecCCC---Cc-----eEEEE--EEEECCCCcEEEEEE--Ec----CC--CCEEEEEE---eeccEEECCEEEeEEE
Confidence 999876442 11 11111 267899999988864 21 12 23456433 5677778877665431
Q ss_pred cceEEEEeeccccccCccccceeeeeeeeeeecccCCCCCcccCCCc
Q 016836 315 QSSVIITRFGDNLKAGLSITRMEETWTIDDLAFNVAGLSLDCFIPPK 361 (381)
Q Consensus 315 ~t~vtl~RfGe~~~~~~~~TrMEE~WtIeeV~FNV~GLS~DcFiPP~ 361 (381)
.+-+....++ .|.|+ +.++.|| +|+-+.|-|..
T Consensus 192 -------~~~d~~~~g~-~t~~~----~~~~~~~--~l~~~~Ft~~~ 224 (229)
T 3buu_A 192 -------IMEDALKSGE-VSVLD----YSDMKLR--DLPDKIFTKDY 224 (229)
T ss_dssp -------EEEESSSSCC-EEEEE----EEEEEEC--CCCGGGSSTGG
T ss_pred -------EEEeCcCCCC-EEEEE----EeeeEeC--CCChHhCCHHH
Confidence 1111111122 34554 6689998 89888886643
No 2
>3bk5_A Putative outer membrane lipoprotein-sorting prote; putative outer membrane protein domain, PSI-2, protein struc initiative; HET: MSE; 2.00A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.50 E-value=0.0045 Score=54.58 Aligned_cols=209 Identities=19% Similarity=0.188 Sum_probs=116.9
Q ss_pred hhHHHHHhHhHhcCchhhcccceeeEEecceeeeeecccCCCCCcccccccCccCCCCCccccceEEEeeecC----Cce
Q 016836 86 SAQYIIQHFTAATGCRKLEGRVKNIFATGKVTMGMGDDFGGSAGSVPVAGAGASASLGGVSEKGCFVMWQMVP----NKW 161 (381)
Q Consensus 86 sAqYIvqQy~AAtGg~k~~~~v~smyA~GkVrM~~~sE~~~~~~~v~~~~~~~~~~~~~~~e~GgFVlWQ~~P----d~W 161 (381)
+|+=|+++..++..| .++..+.++ |... ... |.....-|.+|.+.| ++-
T Consensus 5 ~~~eil~~~~~~~~~------~~~~~~~~~--~~~~---~~~----------------g~~~~~~~~~~~~~~~~~~~~~ 57 (237)
T 3bk5_A 5 KGLEIAQERKARDEG------WGDSIATME--MILK---NAQ----------------GESSTRLMRLKSLEVEGDGDKG 57 (237)
T ss_dssp HHHHHHHHHHHTTCC------CCEEEEEEE--EEEE---CCC-----------------CCEEEEEEEEEECCTTSCCEE
T ss_pred CHHHHHHHhHhhhcc------cCCeEEEEE--EEEE---CCC----------------CCEEEEEEEeecccCCCCCcEE
Confidence 566788888887654 234444444 4321 111 112224577788877 455
Q ss_pred EEEEE----eeCeeeee---cCCCceeeecCCCCcCcccCCCCchhhhhhcCCCchhh-------hhccccceeeeeeec
Q 016836 162 LIELV----VGGHKVVA---GSDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIAV-------ASVFSTAQYVGEKRI 227 (381)
Q Consensus 162 ~~ELv----V~G~KV~A---GsdGkvaWR~Tpw~gsHAakGp~RPLRR~lQGLDPr~t-------A~lF~~A~ciGEk~i 227 (381)
.+++. +.|..+.. -.||+-+|--.|-+.. .-|=|.....-.+-|.|- +. ..-| +...+|++++
T Consensus 58 ~~~~~~P~~~~G~~~L~~~~~~~~~~~w~y~P~~~r-v~ri~~~~~~~~~~~s~~-~~~d~~~~~~~~y-~~~l~g~~~~ 134 (237)
T 3bk5_A 58 LTIFDQPRDVTGTAFLNHSHTIGADDQWLYLPALKR-VKRISSRNKSGPFMGSEF-AYEDLSSFEIEKY-RFNHLKDEKF 134 (237)
T ss_dssp EEEEEESTTTTTCEEEEECCSSSCCEEEEEETTTTE-EEECCGGGTTSBSTTSSC-BGGGGSCCCGGGE-EEEEEEEEEE
T ss_pred EEEEECchHhCCcEEEEEEcCCCCccceeEccccCc-eEEcCccccCCCcccccc-ChhHhhccccccc-ceEEeeeeEE
Confidence 55554 46766653 1289999999887643 222222111111223231 10 1111 3588999999
Q ss_pred CCcceeEEEeccCchhhcccCCCCceEEEeeeecccccccceeEEeecceeeeecCCCCCCeEEeeccccccccccccCc
Q 016836 228 SDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLEDSYLTRIQSPGTQPTYWETTMATKIEDYRAIEG 307 (381)
Q Consensus 228 ~gedCFiLkl~a~~~~l~arS~~~~EiirH~~~GYFSQrtGLLv~lEDs~Ltriqs~~~~~vyWETt~eS~i~DYR~VdG 307 (381)
+|.+|++|++.+.... | ..-+.. =|+++.|+++++.|- +- ..| --|++.. +.+|+.++|
T Consensus 135 ~g~~~~vl~~~pk~~~---~-----~y~k~~--~wiD~~t~~~~k~~~--~d----~~G--~l~~~~~---~~~~~~~~g 193 (237)
T 3bk5_A 135 NGQDVFVLEQIPTDKN---S-----GYTKQV--VWLDKAHYRPLKVEF--YD----RKG--ALLKTLT---FANYKQYLD 193 (237)
T ss_dssp TTEEEEEEEEEESCTT---S-----SEEEEE--EEEETTTCCEEEEEE--EE----TTS--CEEEEEE---EEEEEEETT
T ss_pred CCeeEEEEEEEECCCC---C-----CceEEE--EEEECCCCeEEEEEE--Ec----CCC--CEEEEEE---EeeeEEEcc
Confidence 9999999999876443 1 122222 267899999998874 21 122 1344432 447888888
Q ss_pred -eeeecCCcceEEEEeeccccccCccccceeeeeeeeeeecccCCCCCcccCC
Q 016836 308 -VMIAHSGQSSVIITRFGDNLKAGLSITRMEETWTIDDLAFNVAGLSLDCFIP 359 (381)
Q Consensus 308 -v~IAH~G~t~vtl~RfGe~~~~~~~~TrMEE~WtIeeV~FNV~GLS~DcFiP 359 (381)
+.+++.- +++-. ..+ +.|.|+ +.++.||. +|+-+.|=|
T Consensus 194 ~~~~~~~~----~~~dl----~~g-~~t~~~----~~~~~~~~-~~~~~~Ft~ 232 (237)
T 3bk5_A 194 KYWRAHTM----AMTNH----QTG-KSTELN----TSDLRFQT-GLEENDFNK 232 (237)
T ss_dssp TEEEEEEE----EEEET----TTC-CEEEEE----EEEEEECC-CCCGGGGCG
T ss_pred eEEEEEEE----EEEEC----CCC-CEEEEE----EeeEEeCC-CCChHhCCH
Confidence 6666432 22221 112 234554 55999995 788777754
No 3
>2yzy_A Putative uncharacterized protein TTHA1012; uncharacterized conserved protein, structural genomics, UNKN function, NPPSFA; 1.60A {Thermus thermophilus}
Probab=68.58 E-value=3.6 Score=36.19 Aligned_cols=67 Identities=18% Similarity=0.192 Sum_probs=34.1
Q ss_pred eCeeeeecCCCceeeecCCCCcCcccCCCCchhhhhhc-CCCchhhhhcccc--------ceeeeeeecCCcceeEEEec
Q 016836 168 GGHKVVAGSDGNFAWRHTPWLGSHAAKGSVRPLRRALQ-GLDPIAVASVFST--------AQYVGEKRISDIDCFVLKLA 238 (381)
Q Consensus 168 ~G~KV~AGsdGkvaWR~Tpw~gsHAakGp~RPLRR~lQ-GLDPr~tA~lF~~--------A~ciGEk~i~gedCFiLkl~ 238 (381)
.|..++ +||+-.|...|-.. .+ -.+|+-++++ ++. ..-+.|+.. ...+||+.++|.+|++|.+.
T Consensus 64 ~g~~~l--~~g~~~W~y~p~~~-qv---~i~~~~~~~~~~mg-~~~~~l~~~~~l~~~y~~~~~~~e~~~g~~~~~le~~ 136 (200)
T 2yzy_A 64 EGNFTV--ITEKEVWNYLYLTN-QL---VISPREKAKIQGLG-FAPQGLGDLKALSEQVDLRLEGEVRLPEGMAWKLVGR 136 (200)
T ss_dssp TTCEEE--ECSSCEEEEETTTT-EE---EEEC-------------------------CCEEEEEEEEEETTEEEEEEEEE
T ss_pred cCeEEE--ecCchheeecCCcC-eE---EEeCcccccCcccC-cCHHHhhccccccccceEEEEEEEEeCCccEEEEEEE
Confidence 344444 48999998887652 12 2344433322 211 111122211 25789999999999999988
Q ss_pred cCc
Q 016836 239 ANQ 241 (381)
Q Consensus 239 a~~ 241 (381)
+..
T Consensus 137 Pk~ 139 (200)
T 2yzy_A 137 SKE 139 (200)
T ss_dssp C--
T ss_pred ECC
Confidence 753
No 4
>3m4w_A Sigma-E factor regulatory protein RSEB; RSEA, RSEB, RSEP, stress response, sigma factor, periplasm, membrane, transmembrane; 2.30A {Escherichia coli} PDB: 2p4b_A 2v43_A 2v42_A
Probab=66.02 E-value=5.6 Score=37.66 Aligned_cols=57 Identities=21% Similarity=0.302 Sum_probs=41.7
Q ss_pred CCCchhhhhccccceeeeeeecCCcceeEEEeccCchhhcccCCCCceEEEeeeecccccccceeEEeec
Q 016836 206 GLDPIAVASVFSTAQYVGEKRISDIDCFVLKLAANQTDLADRSDSTAEMIKHVIFGYFSQRSGLLVYLED 275 (381)
Q Consensus 206 GLDPr~tA~lF~~A~ciGEk~i~gedCFiLkl~a~~~~l~arS~~~~EiirH~~~GYFSQrtGLLv~lED 275 (381)
..|+...+..| +...+|+.+|+|-+|.+|++.+.... | -.|.| |-++.|||++|.|-
T Consensus 93 ~~~~~~l~~~Y-~~~~~g~erVaGr~~~vv~l~PkD~~---r-------y~y~l--WiD~et~lpLk~e~ 149 (295)
T 3m4w_A 93 YTDFKRLSPYY-DFISVGRTRIADRLCEVIRVVARDGT---R-------YSYIV--WMDTESKLPMRVDL 149 (295)
T ss_dssp GCCHHHHTTTE-EEEEEEEEEETTEEEEEEEEEETTSC---S-------CEEEE--EEETTTCCEEEEEE
T ss_pred ccChhHHhhCc-eEEEcCceEECCeEEEEEEEEECCCC---c-------eeEEE--EEEccCCCEEEEEE
Confidence 34555555554 45689999999999999999875331 1 24455 67899999999885
No 5
>3tu8_A Burkholderia lethal factor 1 (BLF1); toxin, unknown function; 1.04A {Burkholderia pseudomallei} PDB: 3tua_A
Probab=58.57 E-value=4.4 Score=36.54 Aligned_cols=25 Identities=32% Similarity=0.615 Sum_probs=21.6
Q ss_pred CCceEEEEEeeCeeeeecCCCceeee
Q 016836 158 PNKWLIELVVGGHKVVAGSDGNFAWR 183 (381)
Q Consensus 158 Pd~W~~ELvV~G~KV~AGsdGkvaWR 183 (381)
-||-.+-..++||||.|| ||.++|.
T Consensus 81 vdmlfftyylsgckvfag-dggpvwh 105 (210)
T 3tu8_A 81 VDMLFFTYYLSGCKVFAG-DGGPVWH 105 (210)
T ss_dssp TTCEEEECCBSSCEEEEE-TTSCEEE
T ss_pred hhhhhhhhhhccceEEec-CCCceee
Confidence 488899999999999998 6778884
No 6
>3mh9_C Lipoprotein LPRG; mutant LPRG, glycolipid binding protein, lipid protein, structural genomics, TB structural genomics consor TBSGC; 1.79A {Mycobacterium tuberculosis} SCOP: b.125.1.0 PDB: 3mha_A* 3mh8_A*
Probab=35.70 E-value=64 Score=29.33 Aligned_cols=77 Identities=21% Similarity=0.222 Sum_probs=49.9
Q ss_pred EEEEEeeCeeeeecCCCceeeecCCCCcCcccCCCCchhhhhhcCCCchh-hhhc---cccceeeeeeecCCcceeEEEe
Q 016836 162 LIELVVGGHKVVAGSDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIA-VASV---FSTAQYVGEKRISDIDCFVLKL 237 (381)
Q Consensus 162 ~~ELvV~G~KV~AGsdGkvaWR~Tpw~gsHAakGp~RPLRR~lQGLDPr~-tA~l---F~~A~ciGEk~i~gedCFiLkl 237 (381)
-+|+|+-|-++-+.-.++ +|+-.-.+.--..| .+-|||.. .++| +.+.+.+|+++|||.....++-
T Consensus 75 ~ve~v~vd~~lY~~~~~~------~w~~~~~a~~~~d~----~~~ldP~~gl~~lL~~~~dv~~~G~EtvdGv~t~~~tG 144 (218)
T 3mh9_C 75 DADFVVFDGILYATLTPN------QWSDFGPAADIYDP----AQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISG 144 (218)
T ss_dssp EEEEEEETTEEEEEEETT------EEEEEEEGGGTCCG----GGGTCTTTSHHHHHHTEEEEEEEEEEEETTEEEEEEEE
T ss_pred ceEEEEECCEEEEecCCC------CceEcCccccccCh----hhhcCHHHHHHHHHHhcCCceecceeEECCEEEEEEEE
Confidence 578887777776665443 34332111100112 33489854 4555 6778999999999999999998
Q ss_pred ccCchhhcccC
Q 016836 238 AANQTDLADRS 248 (381)
Q Consensus 238 ~a~~~~l~arS 248 (381)
.-+++.+.+-.
T Consensus 145 tv~~~~~~~~~ 155 (218)
T 3mh9_C 145 KVSAQAVNQIA 155 (218)
T ss_dssp EECHHHHHHHC
T ss_pred EECHHHHhhhc
Confidence 77777776543
No 7
>1bte_A Protein (activin receptor type II); serine kinase, ligand binding domain, three-finger transferase; HET: NAG; 1.50A {Mus musculus} SCOP: g.7.1.3 PDB: 2goo_C* 1lx5_B*
Probab=19.67 E-value=73 Score=26.06 Aligned_cols=22 Identities=32% Similarity=0.779 Sum_probs=17.1
Q ss_pred ccceEEEeeecCCceEEEEEeeCe
Q 016836 147 EKGCFVMWQMVPNKWLIELVVGGH 170 (381)
Q Consensus 147 e~GgFVlWQ~~Pd~W~~ELvV~G~ 170 (381)
-.+||+||.+..+ -++++.-|+
T Consensus 33 ~~~C~~lW~~~~g--~~~i~~qGC 54 (97)
T 1bte_A 33 RRHCFATWKNISG--SIEIVKQGC 54 (97)
T ss_dssp CCEEEEEEEEETT--EEEEEEEEE
T ss_pred CCceEEEEeeCCC--CEEEEEecc
Confidence 4699999999986 566666665
No 8
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=17.25 E-value=52 Score=26.54 Aligned_cols=14 Identities=29% Similarity=0.676 Sum_probs=11.1
Q ss_pred eecCCcceeEEEec
Q 016836 225 KRISDIDCFVLKLA 238 (381)
Q Consensus 225 k~i~gedCFiLkl~ 238 (381)
...|..|||||..-
T Consensus 34 ssLns~D~FILd~g 47 (114)
T 1svq_A 34 SSLNSGDCFLLDAG 47 (114)
T ss_dssp SSCCTTSEEEEEET
T ss_pred HHcCCCCeEEEecC
Confidence 45677899999875
No 9
>4hg1_A Putative cytoplasmic protein; PSI-biology, MCSG, midwest center for structural genomics; HET: MLY MSE MLZ PG4; 1.75A {Salmonella enterica subsp} PDB: 4hg1_C* 4hg1_B*
Probab=16.58 E-value=89 Score=29.01 Aligned_cols=34 Identities=29% Similarity=0.518 Sum_probs=25.8
Q ss_pred eeeecCCcceEEEEeeccccccCcccccee--eeee
Q 016836 308 VMIAHSGQSSVIITRFGDNLKAGLSITRME--ETWT 341 (381)
Q Consensus 308 v~IAH~G~t~vtl~RfGe~~~~~~~~TrME--E~Wt 341 (381)
|-|+|.|-..+.+|----.....-.+|||| |-|-
T Consensus 126 irI~H~GDQ~i~IY~tE~DenGEYPi~R~E~nefWL 161 (225)
T 4hg1_A 126 IRIDHVGDQAIFIYITERDANGEYPIARMERNEFWL 161 (225)
T ss_dssp EEECCSSSSEEEEEESCCCTTSCCCEEEEETTEEEE
T ss_pred EEeccCCCceEEEEEeecccCCCCCceehhhhhHHH
Confidence 889999999999997655544456688998 3453
No 10
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=16.58 E-value=44 Score=29.93 Aligned_cols=26 Identities=38% Similarity=0.604 Sum_probs=21.5
Q ss_pred HHhhCCCCcccCCCCCCCCccccchhHHHHHhHhHh
Q 016836 62 LSVLGCPLFPVPLLPKQPLNQVCSSAQYIIQHFTAA 97 (381)
Q Consensus 62 L~vvGaPL~P~~v~~~~p~~~~~SsAqYIvqQy~AA 97 (381)
|=+||||=+|+| +|+|=|+..++...
T Consensus 10 LilLGCPE~Pvq----------~p~~lYl~~~Lk~~ 35 (157)
T 1kjn_A 10 LMVLGCPESPVQ----------IPLAIYTSHKLKKK 35 (157)
T ss_dssp EEECCCSCSTTH----------HHHHHHHHHHHHHT
T ss_pred eEEecCCCCcch----------hhHHHHHHHHHHhc
Confidence 458999999998 78999998887654
Done!