Query 016836
Match_columns 381
No_of_seqs 90 out of 92
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 04:35:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016836.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016836hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1btea_ g.7.1.3 (A:) Type II a 42.3 7.1 0.00051 30.3 2.7 22 147-170 32-53 (96)
2 d1ypra_ d.110.1.1 (A:) Profili 32.6 10 0.00073 29.4 2.2 63 173-251 20-84 (125)
3 d2h62d1 g.7.1.3 (D:8-98) Type 29.7 15 0.0011 28.3 2.6 22 147-170 31-52 (91)
4 d1fi4a1 d.14.1.5 (A:3-190) Mev 23.9 8.4 0.00061 32.5 0.2 18 141-158 152-169 (188)
5 d1kjna_ c.115.1.1 (A:) Hypothe 20.6 17 0.0012 30.4 1.4 26 62-97 5-30 (152)
6 d1b2pa_ b.78.1.1 (A:) Lectin ( 19.4 76 0.0056 23.9 5.1 60 106-183 22-85 (119)
7 d2i74a1 b.18.1.29 (A:472-651) 15.7 40 0.0029 28.4 2.8 40 146-185 101-156 (180)
8 d2byoa1 b.125.1.3 (A:20-207) P 12.9 71 0.0052 26.1 3.6 76 163-250 64-143 (188)
9 d1sdwa1 b.121.1.2 (A:45-198) P 10.5 37 0.0027 27.0 0.9 29 231-259 36-66 (154)
10 d1v66a_ a.140.2.1 (A:) p53 bin 9.7 56 0.0041 23.7 1.5 17 52-68 13-29 (65)
No 1
>d1btea_ g.7.1.3 (A:) Type II activin receptor {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.26 E-value=7.1 Score=30.33 Aligned_cols=22 Identities=32% Similarity=0.812 Sum_probs=17.6
Q ss_pred ccceEEEeeecCCceEEEEEeeCe
Q 016836 147 EKGCFVMWQMVPNKWLIELVVGGH 170 (381)
Q Consensus 147 e~GgFVlWQ~~Pd~W~~ELvV~G~ 170 (381)
..+||+||+..++. +++++-|+
T Consensus 32 ~~~Cf~lW~~~~g~--~~i~~qGC 53 (96)
T d1btea_ 32 RRHCFATWKNISGS--IEIVKQGC 53 (96)
T ss_dssp CCEEEEEEEEETTE--EEEEEEEE
T ss_pred cCceEEecccCCCC--EEEEEecC
Confidence 36899999999987 56666676
No 2
>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.62 E-value=10 Score=29.44 Aligned_cols=63 Identities=22% Similarity=0.403 Sum_probs=37.5
Q ss_pred eecCCCceeeecCCCCcCcccCCCCch--hhhhhcCCCchhhhhccccceeeeeeecCCcceeEEEeccCchhhcccCCC
Q 016836 173 VAGSDGNFAWRHTPWLGSHAAKGSVRP--LRRALQGLDPIAVASVFSTAQYVGEKRISDIDCFVLKLAANQTDLADRSDS 250 (381)
Q Consensus 173 ~AGsdGkvaWR~Tpw~gsHAakGp~RP--LRR~lQGLDPr~tA~lF~~A~ciGEk~i~gedCFiLkl~a~~~~l~arS~~ 250 (381)
+.|-||.-+|-.||=. ++-| ++..+..++..+ .++.+- =.++|+.|++|+-+ +..+.+|.+.
T Consensus 20 I~g~dg~svwA~S~gf-------~~~~~E~~~i~~~f~~~~--~~~~~G-----i~i~G~KY~~~~~d--~~~i~~kk~~ 83 (125)
T d1ypra_ 20 IYSRAGDAVWATSGGL-------SLQPNEIGEIVQGFDNPA--GLQSNG-----LHIQGQKFMLLRAD--DRSIYGRHDA 83 (125)
T ss_dssp EEETTSCCEEEEESCC-------CCCHHHHHHHHHHTTCTH--HHHHHC-----EEETTEEEEEEEEC--SSEEEEEETT
T ss_pred EEeCCCCeeEEECCCC-------CCCHHHHHHHHHHhcCcc--hhccCC-----EEEcCeEEEEEecC--CCeEEEEeCC
Confidence 6788999899999842 1333 344444442221 122221 24679999999854 4467777655
Q ss_pred C
Q 016836 251 T 251 (381)
Q Consensus 251 ~ 251 (381)
.
T Consensus 84 ~ 84 (125)
T d1ypra_ 84 E 84 (125)
T ss_dssp E
T ss_pred C
Confidence 3
No 3
>d2h62d1 g.7.1.3 (D:8-98) Type II activin receptor {Mouse (Mus musculus), isoform IIB [TaxId: 10090]}
Probab=29.75 E-value=15 Score=28.28 Aligned_cols=22 Identities=32% Similarity=0.653 Sum_probs=18.1
Q ss_pred ccceEEEeeecCCceEEEEEeeCe
Q 016836 147 EKGCFVMWQMVPNKWLIELVVGGH 170 (381)
Q Consensus 147 e~GgFVlWQ~~Pd~W~~ELvV~G~ 170 (381)
...||+||+..++- ++|+.-|+
T Consensus 31 ~~~Cy~lW~~~~~~--i~i~~qGC 52 (91)
T d2h62d1 31 RLHCYASWRNSSGT--IELVKKGC 52 (91)
T ss_dssp CEEEEEEEEEETTE--EEEEEEEE
T ss_pred CCccEEEeecCCCC--EEEEEecc
Confidence 45799999999887 77777787
No 4
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.86 E-value=8.4 Score=32.54 Aligned_cols=18 Identities=28% Similarity=0.364 Sum_probs=14.3
Q ss_pred CCCCccccceEEEeeecC
Q 016836 141 SLGGVSEKGCFVMWQMVP 158 (381)
Q Consensus 141 ~~~~~~e~GgFVlWQ~~P 158 (381)
+...++--||||+|++.+
T Consensus 152 GSAcRSi~Gg~v~W~~g~ 169 (188)
T d1fi4a1 152 GSACRSLFGGYVAWEMGK 169 (188)
T ss_dssp GGGGGGGSSSEEEEECCS
T ss_pred cchhhhhcCCeeEeccCC
Confidence 445668999999999764
No 5
>d1kjna_ c.115.1.1 (A:) Hypothetical protein MTH777 (MT0777) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.56 E-value=17 Score=30.41 Aligned_cols=26 Identities=38% Similarity=0.604 Sum_probs=21.1
Q ss_pred HHhhCCCCcccCCCCCCCCccccchhHHHHHhHhHh
Q 016836 62 LSVLGCPLFPVPLLPKQPLNQVCSSAQYIIQHFTAA 97 (381)
Q Consensus 62 L~vvGaPL~P~~v~~~~p~~~~~SsAqYIvqQy~AA 97 (381)
|=+||||=+|++ .|+|=|+...+...
T Consensus 5 lilLGCPe~Pvq----------~~~~lyl~~~Lk~k 30 (152)
T d1kjna_ 5 LMVLGCPESPVQ----------IPLAIYTSHKLKKK 30 (152)
T ss_dssp EEECCCSCSTTH----------HHHHHHHHHHHHHT
T ss_pred EEEecCCCCcch----------hHHHHHHHHHHHhc
Confidence 347999999998 78999998887643
No 6
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}
Probab=19.38 E-value=76 Score=23.91 Aligned_cols=60 Identities=15% Similarity=0.165 Sum_probs=40.3
Q ss_pred cceeeEEecceeeeeecccCCCCCcccccccCccCCCCCccccceEEEeeecCCce----EEEEEeeCeeeeecCCCcee
Q 016836 106 RVKNIFATGKVTMGMGDDFGGSAGSVPVAGAGASASLGGVSEKGCFVMWQMVPNKW----LIELVVGGHKVVAGSDGNFA 181 (381)
Q Consensus 106 ~v~smyA~GkVrM~~~sE~~~~~~~v~~~~~~~~~~~~~~~e~GgFVlWQ~~Pd~W----~~ELvV~G~KV~AGsdGkva 181 (381)
++..+|+.|+-++.| +.+.+.- --.++.++|+....-. .+.|--.|.-|.--.+|++.
T Consensus 22 ~l~~~~~~~~y~l~m-----Q~DGNLV-------------Ly~~~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~~v 83 (119)
T d1b2pa_ 22 SLEILFGTHVYRFIM-----QTDCNLV-------------LYDNNNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTV 83 (119)
T ss_dssp EEEEEETTEEEEEEE-----CTTSCEE-------------EEETTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEE
T ss_pred eEEEecCCceEEEEE-----CCCCcEE-------------EEECCeEEEEecCCCCCcceEEEEEeCCCEEEECCCCcEE
Confidence 457888999988887 2222221 1235567899875433 35555558888889999999
Q ss_pred ee
Q 016836 182 WR 183 (381)
Q Consensus 182 WR 183 (381)
|+
T Consensus 84 Ws 85 (119)
T d1b2pa_ 84 WQ 85 (119)
T ss_dssp EE
T ss_pred EE
Confidence 95
No 7
>d2i74a1 b.18.1.29 (A:472-651) Peptide:N-glycanase, PNGase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.75 E-value=40 Score=28.38 Aligned_cols=40 Identities=28% Similarity=0.543 Sum_probs=27.3
Q ss_pred cccceEEEeeecCCceEEEEEee----------C---eee---eecCCCceeeecC
Q 016836 146 SEKGCFVMWQMVPNKWLIELVVG----------G---HKV---VAGSDGNFAWRHT 185 (381)
Q Consensus 146 ~e~GgFVlWQ~~Pd~W~~ELvV~----------G---~KV---~AGsdGkvaWR~T 185 (381)
...+|=|.|+..-+.=|+++.-+ | -.| .+|.||.+||-|+
T Consensus 101 tf~~G~v~~~~~~~~~~~~i~~d~~~~~~~~~~ga~~~~i~a~LsGG~g~~aWQHa 156 (180)
T d2i74a1 101 SFESGSVRWKLRSETAQVNLLGDKNLRSYNDFSGATEVTLEAELSRGDGDVAWQHT 156 (180)
T ss_dssp ECTTCEEEEEEECSSCEEEECCBSCCEEECTTTTCSEEEEEEEEECCCGGGGGGSE
T ss_pred EECCCEEEEEEEcCCceEEecCCCceeEecCcCCCeEEEEEEEEeCCCccccchhh
Confidence 34577788888777677776532 2 122 4689999999886
No 8
>d2byoa1 b.125.1.3 (A:20-207) Putative lipoprotein LppX {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=12.90 E-value=71 Score=26.08 Aligned_cols=76 Identities=16% Similarity=0.219 Sum_probs=47.1
Q ss_pred EEEEeeCeeeeecCCCceeeecCCCCcCcccCCCCchhhhhhcCCCchh-hhhc---cccceeeeeeecCCcceeEEEec
Q 016836 163 IELVVGGHKVVAGSDGNFAWRHTPWLGSHAAKGSVRPLRRALQGLDPIA-VASV---FSTAQYVGEKRISDIDCFVLKLA 238 (381)
Q Consensus 163 ~ELvV~G~KV~AGsdGkvaWR~Tpw~gsHAakGp~RPLRR~lQGLDPr~-tA~l---F~~A~ciGEk~i~gedCFiLkl~ 238 (381)
+|.++-|.++-+..+++ |..-+ ..+.+ -.-+=|||-. +++| +.++..+|++.|||..|.-+.-.
T Consensus 64 ~~~v~~d~~~Y~~~~~~--w~~~~------~~~~~----d~~~~ldP~~gl~~lLa~~~d~~~~G~EtvdG~~t~~~tgt 131 (188)
T d2byoa1 64 VPFRVQGDNISVKLFDD--WSNLG------SISEL----STSRVLDPAAGVTQLLSGVTNLQAQGTEVIDGISTTKITGT 131 (188)
T ss_dssp EEEEEETTEEEEEETTE--EEEEE------EHHHH----HHHTC-----CCCCCSTTCEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEECCEEEEcCCCc--hhhcC------ccccC----CHhhhcChhHhHHHHhhhcCCceeccceEECCEEEEEEEEE
Confidence 88889998888887653 43211 01111 1112357765 3444 45778999999999999999988
Q ss_pred cCchhhcccCCC
Q 016836 239 ANQTDLADRSDS 250 (381)
Q Consensus 239 a~~~~l~arS~~ 250 (381)
.+.+.+..=..+
T Consensus 132 v~~~~~~~~~~~ 143 (188)
T d2byoa1 132 IPASSVKMLDPG 143 (188)
T ss_dssp ECHHHHHHHCTT
T ss_pred eCHHHHHhhccc
Confidence 888777654443
No 9
>d1sdwa1 b.121.1.2 (A:45-198) Peptidylglycine alpha-hydroxylating monooxygenase, PHM {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=10.54 E-value=37 Score=26.96 Aligned_cols=29 Identities=14% Similarity=0.548 Sum_probs=15.8
Q ss_pred ceeEEEeccCchh-hcc-cCCCCceEEEeee
Q 016836 231 DCFVLKLAANQTD-LAD-RSDSTAEMIKHVI 259 (381)
Q Consensus 231 dCFiLkl~a~~~~-l~a-rS~~~~EiirH~~ 259 (381)
-||++++.-+... +.+ .=-++.+++||++
T Consensus 36 ~C~~~~~p~~~~~~i~~~ep~~n~~~VHH~l 66 (154)
T d1sdwa1 36 FCMSMRLPVDEEAFVIDFKPRASMDTVHHML 66 (154)
T ss_dssp EEEEEECSCSSCEEEEEEEEECCTTTEEEEE
T ss_pred EEEEecCCCCCceeEEEEEEcCCCCeeEEEE
Confidence 4888887533221 111 1114678888885
No 10
>d1v66a_ a.140.2.1 (A:) p53 binding domain of protein inhibitor of activated STAT protein 1, PIAS-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.73 E-value=56 Score=23.71 Aligned_cols=17 Identities=29% Similarity=0.319 Sum_probs=14.3
Q ss_pred cccchhHHHHHHhhCCC
Q 016836 52 INKKSDLKTLLSVLGCP 68 (381)
Q Consensus 52 ~~~~~dl~lLL~vvGaP 68 (381)
.-+-+|||.|||-.|..
T Consensus 13 sfRVsELQ~LLg~~gr~ 29 (65)
T d1v66a_ 13 SLRVSELQVLLGYAGRN 29 (65)
T ss_dssp TCCHHHHHHHHHTTCCC
T ss_pred HHhHHHHHHHHHHcCCC
Confidence 34679999999999975
Done!