Your job contains 1 sequence.
>016848
MSALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSL
PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL
DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL
FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE
VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY
ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH
KCIVAHSLGQAVFDGNVKVNR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016848
(381 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033734 - symbol:ABCI7 "AT1G32500" species:370... 1099 2.6e-111 1
UNIPROTKB|Q83BX9 - symbol:sufD "SufD" species:227377 "Cox... 148 1.5e-07 1
TIGR_CMR|CBU_1358 - symbol:CBU_1358 "conserved hypothetic... 148 1.5e-07 1
UNIPROTKB|P77689 - symbol:sufD "SufD component of SufBCD ... 133 7.0e-06 1
UNIPROTKB|Q60A79 - symbol:sufD "FeS assembly protein SufD... 108 1.7e-05 2
>TAIR|locus:2033734 [details] [associations]
symbol:ABCI7 "AT1G32500" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA;RCA;IDA] [GO:0006810
"transport" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009536 "plastid" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006569 "tryptophan catabolic
process" evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic
process" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR000825 InterPro:IPR011542 Pfam:PF01458
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0005215
GO:GO:0009793 GO:GO:0016226 GO:GO:0010027 EMBL:AC007767
EMBL:AY086585 IPI:IPI00547429 PIR:D86450 RefSeq:NP_564404.1
UniGene:At.40131 ProteinModelPortal:Q9LQK7 IntAct:Q9LQK7
STRING:Q9LQK7 PaxDb:Q9LQK7 PRIDE:Q9LQK7 EnsemblPlants:AT1G32500.1
GeneID:840144 KEGG:ath:AT1G32500 TAIR:At1g32500 eggNOG:COG0719
HOGENOM:HOG000069115 InParanoid:Q9LQK7 KO:K09015 OMA:LSTPWPS
PhylomeDB:Q9LQK7 ProtClustDB:CLSN2688204 Genevestigator:Q9LQK7
GermOnline:AT1G32500 TIGRFAMs:TIGR01981 Uniprot:Q9LQK7
Length = 475
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 218/372 (58%), Positives = 261/372 (70%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDXXXXXXXXXXXXXX 72
N++ PKL RR + V Q A+FSDPFV+QLAESLED
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSVRAQ-----ASFSDPFVLQLAESLEDSLSASPSSSLPLQ- 68
Query: 73 XXKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+ R S LD T+ QF
Sbjct: 69 --RIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY G G+ D + R+S+FI F GDLFWSINGMGA
Sbjct: 127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXX 249
PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPR
Sbjct: 187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVG 246
Query: 250 XXXNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
YW N VLEVV+ K K++HSYLQ +S+ +AHIKWT VRQE S YELVEVSTGG
Sbjct: 247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGG 306
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
KL RHNVHVQQLGPDT TEL++FH+ V++QT DLHS+++LDHPRG RQLHKCIVAHS G
Sbjct: 307 KLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSG 366
Query: 370 QAVFDGNVKVNR 381
QAVFDGNV+VNR
Sbjct: 367 QAVFDGNVRVNR 378
>UNIPROTKB|Q83BX9 [details] [associations]
symbol:sufD "SufD" species:227377 "Coxiella burnetii RSA
493" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000825 InterPro:IPR011542 Pfam:PF01458
GO:GO:0016226 HOGENOM:HOG000069115 KO:K09015 TIGRFAMs:TIGR01981
EMBL:AE016828 GenomeReviews:AE016828_GR OMA:AQKTNAY
RefSeq:NP_820347.1 HSSP:P77689 ProteinModelPortal:Q83BX9
PRIDE:Q83BX9 GeneID:1209264 KEGG:cbu:CBU_1358 PATRIC:17931459
ProtClustDB:CLSK914727 BioCyc:CBUR227377:GJ7S-1348-MONOMER
Uniprot:Q83BX9
Length = 426
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 71/303 (23%), Positives = 123/303 (40%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS---LVLIDGFI 138
+T L +P RK E +++T+ + I ++ D++ D P LV I+G
Sbjct: 28 KTFLLHGFPHRKVENWKYTNVTPIAEQAFS--FGENTDTDIA-DFILPDAYRLVFINGHF 84
Query: 139 QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP 198
+LS LP V + SL + I ++ ++Q F +N D + VP
Sbjct: 85 APRLSDLSGLPSAVQMTSLKNIQRDIQNELA-IKKDYQTA--FSLMNDALFQDGLFLQVP 141
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXXXXXNDCYWA 258
C +E PI+L +LS + L +S R Y+
Sbjct: 142 KDCYLEKPIHLIHLSKP-----TASLTMSQIRHVILLEENAKAVIFEEYQGTN-GVAYFN 195
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 318
N V ++ + + LQ + A HI T++ Q S ++ G +LSR +++
Sbjct: 196 NVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRHSQVTSGHIAMGSELSRDDLNY 255
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 376
+L F+ L D H+R+ DH +C +Q +K ++A +AVF+G
Sbjct: 256 SLDEAGASCQLLGFYYLNDGCHVDNHTRI--DHRVSHCTSQQNYKGVLADK-SRAVFNGK 312
Query: 377 VKV 379
+ V
Sbjct: 313 IIV 315
>TIGR_CMR|CBU_1358 [details] [associations]
symbol:CBU_1358 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000825 InterPro:IPR011542 Pfam:PF01458 GO:GO:0016226
HOGENOM:HOG000069115 KO:K09015 TIGRFAMs:TIGR01981 EMBL:AE016828
GenomeReviews:AE016828_GR OMA:AQKTNAY RefSeq:NP_820347.1
HSSP:P77689 ProteinModelPortal:Q83BX9 PRIDE:Q83BX9 GeneID:1209264
KEGG:cbu:CBU_1358 PATRIC:17931459 ProtClustDB:CLSK914727
BioCyc:CBUR227377:GJ7S-1348-MONOMER Uniprot:Q83BX9
Length = 426
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 71/303 (23%), Positives = 123/303 (40%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS---LVLIDGFI 138
+T L +P RK E +++T+ + I ++ D++ D P LV I+G
Sbjct: 28 KTFLLHGFPHRKVENWKYTNVTPIAEQAFS--FGENTDTDIA-DFILPDAYRLVFINGHF 84
Query: 139 QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP 198
+LS LP V + SL + I ++ ++Q F +N D + VP
Sbjct: 85 APRLSDLSGLPSAVQMTSLKNIQRDIQNELA-IKKDYQTA--FSLMNDALFQDGLFLQVP 141
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXXXXXNDCYWA 258
C +E PI+L +LS + L +S R Y+
Sbjct: 142 KDCYLEKPIHLIHLSKP-----TASLTMSQIRHVILLEENAKAVIFEEYQGTN-GVAYFN 195
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 318
N V ++ + + LQ + A HI T++ Q S ++ G +LSR +++
Sbjct: 196 NVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIHQNRHSQVTSGHIAMGSELSRDDLNY 255
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 376
+L F+ L D H+R+ DH +C +Q +K ++A +AVF+G
Sbjct: 256 SLDEAGASCQLLGFYYLNDGCHVDNHTRI--DHRVSHCTSQQNYKGVLADK-SRAVFNGK 312
Query: 377 VKV 379
+ V
Sbjct: 313 IIV 315
>UNIPROTKB|P77689 [details] [associations]
symbol:sufD "SufD component of SufBCD Fe-S cluster scaffold
complex" species:83333 "Escherichia coli K-12" [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA;IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000825
InterPro:IPR011542 Pfam:PF01458 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016226
eggNOG:COG0719 KO:K09015 TIGRFAMs:TIGR01981 PDB:2ZU0 PDBsum:2ZU0
PIR:A64926 RefSeq:NP_416196.1 RefSeq:YP_489943.1 PDB:1VH4
PDBsum:1VH4 ProteinModelPortal:P77689 SMR:P77689 DIP:DIP-10940N
IntAct:P77689 PRIDE:P77689 EnsemblBacteria:EBESCT00000000837
EnsemblBacteria:EBESCT00000014727 GeneID:12931286 GeneID:944878
KEGG:ecj:Y75_p1656 KEGG:eco:b1681 PATRIC:32118668 EchoBASE:EB3721
EcoGene:EG13963 HOGENOM:HOG000069113 OMA:AQKTNAY
ProtClustDB:PRK10948 BioCyc:EcoCyc:G6907-MONOMER
BioCyc:ECOL316407:JW1671-MONOMER EvolutionaryTrace:P77689
Genevestigator:P77689 Uniprot:P77689
Length = 423
Score = 133 (51.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 72/307 (23%), Positives = 131/307 (42%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFPSLVLIDGFI 138
Q LL T P+RK E +++T + +SQ I P ++ LV +DG
Sbjct: 34 QQLLRTGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVFVDGRY 93
Query: 139 QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP 198
+ LS+ +G G + ++D + + D I ++F + A + I V
Sbjct: 94 VPA---LSDATEGS--GYEVSINDD-RQGLPDAIQ----AEVFLHLTESLAQSVTHIAVK 143
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRXXXXXXXXXXXXXXXXXXXXXXNDC-YW 257
G + P+ L +++ +G V +++ ++ R ND ++
Sbjct: 144 RGQRPAKPLLLMHIT-QG--VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHF 198
Query: 258 ANSVLEVVIGKGGKVRHSYL--QNQ-SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
+ + + ++H L +N S + AH TA + + GG + RH
Sbjct: 199 TGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGAVLRH 255
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
N Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AV
Sbjct: 256 NTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAV 312
Query: 373 FDGNVKV 379
F+G + V
Sbjct: 313 FNGLINV 319
>UNIPROTKB|Q60A79 [details] [associations]
symbol:sufD "FeS assembly protein SufD" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000825
InterPro:IPR011542 Pfam:PF01458 GO:GO:0016226 HOGENOM:HOG000069115
KO:K09015 TIGRFAMs:TIGR01981 EMBL:AE017282
GenomeReviews:AE017282_GR OMA:AQKTNAY RefSeq:YP_113468.1
ProteinModelPortal:Q60A79 GeneID:3102947 KEGG:mca:MCA0990
PATRIC:22605782 Uniprot:Q60A79
Length = 434
Score = 108 (43.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI--KWTAVRQETASGYELVEVSTGGKLSR 313
Y V ++ + G + H LQ A H + V ++ G+ L+ S GG L R
Sbjct: 212 YLGAVVNQIEVADNGGLNHYKLQLDGGRAYHFGGSYARVARDGRFGHHLL--SLGGLLVR 269
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 373
+ VH + LG +TE++ L + Q D H R+ D P G R ++ I+ + VF
Sbjct: 270 NEVHAR-LGHAAQTEMNGVFLSENRQHVDNHIRVDHDEPHGSSRVSYRGIL-EDRSRGVF 327
Query: 374 DGNVKVN 380
G + V+
Sbjct: 328 QGRIVVH 334
Score = 64 (27.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 34/138 (24%), Positives = 55/138 (39%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSS------LDVSTDAQFPSLVLIDGFIQNSA 142
+PS +DE +R+T + I+ T + + ++ A SLV +DG
Sbjct: 40 FPSPRDEEWRYTHVAPIERKLFTAATGSADTDAAEALIESCRIADAWSLVFVDGMFVPGL 99
Query: 143 LNLSNLPDGVYV---GSLLGVS--DGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVI 195
LP GV + SLL +S DG + + D F N D V+
Sbjct: 100 SERHGLPAGVTLESLASLLALSEADGNAAWLESGLERETESDRHGFLDFNTAFFTDGAVL 159
Query: 196 YVPAGCKVENPIYLKYLS 213
+ G +E P+ L ++S
Sbjct: 160 RLEEGVALEKPVQLFFVS 177
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 381 343 0.00096 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 609 (65 KB)
Total size of DFA: 225 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.56u 0.19s 25.75t Elapsed: 00:00:02
Total cpu time: 25.56u 0.19s 25.75t Elapsed: 00:00:02
Start: Tue May 21 01:53:58 2013 End: Tue May 21 01:54:00 2013