BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016848
(381 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225427242|ref|XP_002278544.1| PREDICTED: protein ABCI7, chloroplastic-like [Vitis vinifera]
Length = 495
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/392 (66%), Positives = 316/392 (80%), Gaps = 28/392 (7%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR A FSDPFV+
Sbjct: 16 MAATLLSPHLLLN----PKLSIQNSASKFPTPKSRSTP-KIR---------AAFSDPFVL 61
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 62 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 119
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I K+VS
Sbjct: 120 TPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVS 179
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+F++ F+ GDLFWS+NG+G PD+ V+YVPAGC+VE P+++ Y SVEGG++ SKKLP+SNP
Sbjct: 180 EFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNP 238
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
RV VLVEEGGE+G+IEE+VG N CYWAN+V EVVIG+G KV+HSY+Q+QSL+AAHIKW
Sbjct: 239 RVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKW 298
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
T+V+Q ++S YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL V DQTQDLHSRL+L
Sbjct: 299 TSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVL 358
Query: 350 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DHPRGY RQLHKCIVAHSLGQAVFDGN+KVNR
Sbjct: 359 DHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNR 390
>gi|297742116|emb|CBI33903.3| unnamed protein product [Vitis vinifera]
Length = 480
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/392 (66%), Positives = 316/392 (80%), Gaps = 28/392 (7%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR A FSDPFV+
Sbjct: 1 MAATLLSPHLLLN----PKLSIQNSASKFPTPKSRSTP-KIR---------AAFSDPFVL 46
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 47 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 104
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I K+VS
Sbjct: 105 TPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVS 164
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+F++ F+ GDLFWS+NG+G PD+ V+YVPAGC+VE P+++ Y SVEGG++ SKKLP+SNP
Sbjct: 165 EFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNP 223
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
RV VLVEEGGE+G+IEE+VG N CYWAN+V EVVIG+G KV+HSY+Q+QSL+AAHIKW
Sbjct: 224 RVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKW 283
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
T+V+Q ++S YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL V DQTQDLHSRL+L
Sbjct: 284 TSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVL 343
Query: 350 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DHPRGY RQLHKCIVAHSLGQAVFDGN+KVNR
Sbjct: 344 DHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNR 375
>gi|147775510|emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]
Length = 593
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/392 (66%), Positives = 315/392 (80%), Gaps = 28/392 (7%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR A FSDPFV+
Sbjct: 16 MAASLLSPHLLLN----PKLSIQTSASKFPTPKSRSTP-KIR---------AAFSDPFVL 61
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 62 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 119
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I K VS
Sbjct: 120 TPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKXVS 179
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+F++ F+ GDLFWS+NG+G PD+ V+YVPAGC+VE P+++ Y SVEGG++ SKKLP+SNP
Sbjct: 180 EFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNP 238
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
RV VLVEEGGE+G+IEE+VG N CYWAN+V EVVIG+G KV+HSY+Q+QSL+AAHIKW
Sbjct: 239 RVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKW 298
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
T+V+Q ++S YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL V DQTQDLHSRL+L
Sbjct: 299 TSVQQGSSSSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVL 358
Query: 350 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DHPRGY RQLHKCIVAHSLGQAVFDGN+KVNR
Sbjct: 359 DHPRGYSRQLHKCIVAHSLGQAVFDGNIKVNR 390
>gi|297851692|ref|XP_002893727.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
gi|297339569|gb|EFH69986.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
Length = 476
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/372 (65%), Positives = 290/372 (77%), Gaps = 10/372 (2%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + + QA+FSDPFV+QLAESLEDSL +S SS PL
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSIR-----AQASFSDPFVLQLAESLEDSLSASPSSSSLPL- 68
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
Q++RDSS++TLLSTPWPSRKDEPFRFTDTS I+ SQI+P++ R S LD T+ QFP
Sbjct: 69 -QRIRDSSAETLLSTPWPSRKDEPFRFTDTSFIRFSQIEPVSTHQRNSEILDNLTETQFP 127
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY GS G+ D + RVS+FI F GDLFWSINGMGA
Sbjct: 128 NAVIIDGFVSNLTIGPSDLPDGVYFGSFSGLPDELTNRVSEFIGNFDSGDLFWSINGMGA 187
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPR VLVEEGGE+GI+EEFVG
Sbjct: 188 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRGFVLVEEGGEIGIVEEFVG 247
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
K+ YW N VLEVV+ K GK++HSYLQ +S+ +AH+KWT VRQE S YELVEVSTGG
Sbjct: 248 KDEEGFYWTNPVLEVVVQKNGKLKHSYLQKESMASAHVKWTFVRQEAESEYELVEVSTGG 307
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
KL RHNVHVQQLGPDT TEL++FH+ V++QT DLHSR++LDHPRG RQLHKCIVAHS G
Sbjct: 308 KLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSRIVLDHPRGSSRQLHKCIVAHSSG 367
Query: 370 QAVFDGNVKVNR 381
QAVFDGNV+VNR
Sbjct: 368 QAVFDGNVRVNR 379
>gi|18398463|ref|NP_564404.1| protein ABCI7 [Arabidopsis thaliana]
gi|75180162|sp|Q9LQK7.1|AB7I_ARATH RecName: Full=Protein ABCI7, chloroplastic; AltName: Full=ABC
transporter I family member 7; Short=ABC transporter
ABCI.7; Short=AtABCI7; AltName: Full=Non-intrinsic ABC
protein 6; AltName: Full=Plastid SufD-like protein;
Flags: Precursor
gi|8920626|gb|AAF81348.1|AC007767_28 Contains an uncharacterized protein family (UPF0051) domain
PF|01458 [Arabidopsis thaliana]
gi|115646721|gb|ABJ17094.1| At1g32500 [Arabidopsis thaliana]
gi|332193373|gb|AEE31494.1| protein ABCI7 [Arabidopsis thaliana]
Length = 475
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/372 (65%), Positives = 289/372 (77%), Gaps = 11/372 (2%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + V QA+FSDPFV+QLAESLEDSL +S SS
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSVR-----AQASFSDPFVLQLAESLEDSLSASPSSSLP--- 66
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
LQ++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+ R S LD T+ QF
Sbjct: 67 LQRIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY G G+ D + R+S+FI F GDLFWSINGMGA
Sbjct: 127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPRV VLVEEGGE+GI+EEFVG
Sbjct: 187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVG 246
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
K+ YW N VLEVV+ K K++HSYLQ +S+ +AHIKWT VRQE S YELVEVSTGG
Sbjct: 247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGG 306
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
KL RHNVHVQQLGPDT TEL++FH+ V++QT DLHS+++LDHPRG RQLHKCIVAHS G
Sbjct: 307 KLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSG 366
Query: 370 QAVFDGNVKVNR 381
QAVFDGNV+VNR
Sbjct: 367 QAVFDGNVRVNR 378
>gi|21554655|gb|AAM63647.1| unknown [Arabidopsis thaliana]
Length = 475
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/372 (64%), Positives = 288/372 (77%), Gaps = 11/372 (2%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + V QA+FSDPFV+QLAESLEDSL +S SS
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSVR-----AQASFSDPFVLQLAESLEDSLSASPSSSLP--- 66
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
LQ++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+ R S LD T+ QF
Sbjct: 67 LQRIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY G G+ D + R+S+FI F GDLFWSINGMGA
Sbjct: 127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPRV VLVEEGGE+ I+EEFVG
Sbjct: 187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEISIVEEFVG 246
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
K+ YW N VLEVV+ K K++HSYLQ +S+ +AHIKWT VRQE S YELVEVSTGG
Sbjct: 247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGG 306
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
KL RHNVHVQQLGPDT TEL++FH+ V++QT DLHS+++LDHPRG RQLHKCIVAHS G
Sbjct: 307 KLGRHNVHVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSG 366
Query: 370 QAVFDGNVKVNR 381
QAVFDGNV+VNR
Sbjct: 367 QAVFDGNVRVNR 378
>gi|255588981|ref|XP_002534787.1| Protein sufD, putative [Ricinus communis]
gi|223524572|gb|EEF27596.1| Protein sufD, putative [Ricinus communis]
Length = 484
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/389 (67%), Positives = 309/389 (79%), Gaps = 18/389 (4%)
Query: 1 MSALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQ-TTFP--QATFSDPFVIQLAESLE 57
MSAL F P ++ +L PK + +K++ SL TT P QA FSDPFV+QLAE+LE
Sbjct: 1 MSALVFVPPVYTFTRITTRLKPKPK---HKVKTSLSLTTTPVIQAGFSDPFVLQLAETLE 57
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP- 116
DSL S S LQKLRDS S++LLSTPWPSR+DEPFRFTDTS+IK SQI PI++P
Sbjct: 58 DSLSPSPS-------LQKLRDSCSESLLSTPWPSRRDEPFRFTDTSLIKQSQIHPISKPP 110
Query: 117 --SSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG-VSDGIMKRVSDFIS 173
D+S DAQ P++V++DGFI NS N N PDGV+VGS+L D I K VS +
Sbjct: 111 PIDHLTDISKDAQLPNIVIVDGFILNSMSNSLNFPDGVFVGSMLNDPEDKIAKLVSKYFD 170
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+FQ GDLFWSING+GAPD+ VIYVPAG +VENPI+L+Y+SVEGG S KLP+SNPRV+V
Sbjct: 171 DFQWGDLFWSINGLGAPDVAVIYVPAGVRVENPIHLRYVSVEGGEEGSNKLPVSNPRVLV 230
Query: 234 LVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
+VEEGGEVGIIEEFV G+ CYWANSVLEV+I +G KV+HSY+Q+QSLN+AHIKWTAV
Sbjct: 231 VVEEGGEVGIIEEFVSIGSGDKCYWANSVLEVMIEEGAKVKHSYIQSQSLNSAHIKWTAV 290
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
+Q+++S YELVEVSTGGKLSRHN+HVQQLGPDT TELS+FHL VS QTQDLHSRL+LDHP
Sbjct: 291 QQKSSSTYELVEVSTGGKLSRHNLHVQQLGPDTSTELSTFHLCVSSQTQDLHSRLVLDHP 350
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
R Y RQLHKCIVAHSLGQAVFDGNVKVNR
Sbjct: 351 RAYSRQLHKCIVAHSLGQAVFDGNVKVNR 379
>gi|449461525|ref|XP_004148492.1| PREDICTED: protein ABCI7, chloroplastic-like [Cucumis sativus]
gi|449521999|ref|XP_004168016.1| PREDICTED: protein ABCI7, chloroplastic-like [Cucumis sativus]
Length = 496
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/400 (62%), Positives = 305/400 (76%), Gaps = 27/400 (6%)
Query: 1 MSALSFSPHLHININRNPKLTP------------KRRAKPNKI---RVSLQTTFPQATFS 45
M+ +F+PH+ R P TP KR+ K N I RVSLQ + P + S
Sbjct: 1 MATFTFTPHIG---GRLP--TPSLSVSSSYSSTSKRKPKFNSITTTRVSLQASTP--SLS 53
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
DPFV+QLAE+LEDSL SSSSS P PLQKLR+SS++ LLSTPWPSR+DEPFRFTD S I
Sbjct: 54 DPFVLQLAETLEDSLSSSSSSS-SPFPLQKLRESSAENLLSTPWPSRRDEPFRFTDVSFI 112
Query: 106 KSSQIQPITRPSSSLDVST---DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-S 161
K SQI PI+ P ++S+ + QF ++V++DG NS NL+ LP+GVYVGS + + S
Sbjct: 113 KQSQIHPISNPPQFSELSSIPLETQFANVVIVDGHFVNSVSNLTELPNGVYVGSFIDLPS 172
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
+ + KRVS+F+ GDLFWSING+GAPDL V+YVPAGCKVENPI+ +Y S+ GG+ S
Sbjct: 173 ESVGKRVSEFVDGKFAGDLFWSINGVGAPDLTVVYVPAGCKVENPIHFRYYSINGGDEGS 232
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
K+L +SNPRV+VLVE GGE+ IIEEF+ +G YW+N VLEVVIG GGKV+HSY+QNQS
Sbjct: 233 KELAVSNPRVLVLVENGGEIEIIEEFLSGDGGKSYWSNPVLEVVIGSGGKVKHSYIQNQS 292
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
LNAAHIKWT+V+QE+ S YELVE+STGG+LSRHNVH+QQLGP+T TELS+ HL + +QTQ
Sbjct: 293 LNAAHIKWTSVQQESTSAYELVEISTGGRLSRHNVHIQQLGPETTTELSTLHLSIGNQTQ 352
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DLHS L+LDHPRGY RQLHKCIVA+ GQAVFDGNVKVNR
Sbjct: 353 DLHSSLVLDHPRGYSRQLHKCIVANPQGQAVFDGNVKVNR 392
>gi|224138876|ref|XP_002326712.1| predicted protein [Populus trichocarpa]
gi|222834034|gb|EEE72511.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 260/366 (71%), Positives = 295/366 (80%), Gaps = 16/366 (4%)
Query: 23 KRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQ 82
K++ KP +S T QA+FSDPFV+QLAE+LEDSL S S LQ+LRDSSS+
Sbjct: 3 KQKQKPKSFSLS-TTPITQASFSDPFVLQLAETLEDSLSPSVS-------LQRLRDSSSE 54
Query: 83 TLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD----VSTDAQFPSLVLIDGFI 138
+LLST WPSRKDEPFRFTDTS I+ SQI PIT+P LD ++ D PS+V+ DGF+
Sbjct: 55 SLLSTSWPSRKDEPFRFTDTSFIRLSQIVPITKPPQ-LDYLPSINEDTLLPSIVIADGFV 113
Query: 139 QNSALNLSNLPDGVYVGSLLG-VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
NS LS LPDGVYVGSLL SD I +RV +F+ +F+ GDLFWSING+GA D+ V+YV
Sbjct: 114 LNSMSKLSTLPDGVYVGSLLSDSSDRIAERVLEFVGDFEWGDLFWSINGLGAHDMTVVYV 173
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
PAG KVENPI+ KY+SVEGG SKKLP+SNPRV V+VEEGGEVGIIEEFV KEGND
Sbjct: 174 PAGVKVENPIHFKYVSVEGGEKGSKKLPVSNPRVFVVVEEGGEVGIIEEFVSKEGNDDRY 233
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
YWAN VLEVVIGKG KVRHSY+Q+QSLN+AHIKWTAVRQE AS YELVEVSTGGKLSRHN
Sbjct: 234 YWANPVLEVVIGKGAKVRHSYVQSQSLNSAHIKWTAVRQEAASTYELVEVSTGGKLSRHN 293
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 375
+HVQQLGPDT TELS+FHL V DQTQDLHSRL+LDHPRG +QLHKCIVAHS GQAVFDG
Sbjct: 294 LHVQQLGPDTATELSTFHLSVGDQTQDLHSRLILDHPRGRSQQLHKCIVAHSQGQAVFDG 353
Query: 376 NVKVNR 381
NVKVNR
Sbjct: 354 NVKVNR 359
>gi|359475767|ref|XP_003631753.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
[Vitis vinifera]
Length = 527
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/398 (64%), Positives = 311/398 (78%), Gaps = 34/398 (8%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR ATFSDPFV
Sbjct: 1 MAATLLSPHLLLN----PKLSIQTSASKFPTPKSRSTP-KIR---------ATFSDPFVP 46
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 47 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 104
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I KRVS
Sbjct: 105 TPISHPPTSIAISTDTQFPNLCIVDGHIIYSLSNLSQLPTGVFVGSLSSLPSETITKRVS 164
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+F++ F+ GDLFWS+NG+G D+ V+YVPAGC+VE P+++ Y SVEGG++ KKLP+SNP
Sbjct: 165 EFVANFE-GDLFWSLNGLGTLDMVVVYVPAGCRVEMPLHIVYXSVEGGDIGFKKLPVSNP 223
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEV------VIGKGGKVRHSYLQNQSLN 283
RV VLVEEGGE+G IEEFVG N CYWAN+V EV VIG+G KV+HSY+Q+QSL+
Sbjct: 224 RVFVLVEEGGEIGEIEEFVGGGENKCYWANAVTEVRIIIILVIGEGAKVKHSYIQSQSLS 283
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
AAHIKWT+V+Q ++ YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL V D TQDL
Sbjct: 284 AAHIKWTSVQQGSSGSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDPTQDL 343
Query: 344 HSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
H+RL+LDHPRGY RQLHKCIVAHSLGQAVFDGN+KVNR
Sbjct: 344 HTRLVLDHPRGYFRQLHKCIVAHSLGQAVFDGNIKVNR 381
>gi|357482367|ref|XP_003611469.1| Protein ABCI7 [Medicago truncatula]
gi|355512804|gb|AES94427.1| Protein ABCI7 [Medicago truncatula]
Length = 474
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/354 (59%), Positives = 264/354 (74%), Gaps = 13/354 (3%)
Query: 31 IRVSLQTTFPQATF--SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTP 88
IR + TF A SDPF++ LAE+LEDS+P+ P PLQ LR +SS +LLS+P
Sbjct: 29 IRTKTRVTFNNAISISSDPFILDLAETLEDSVPT-------PQPLQNLRQASSHSLLSSP 81
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV-LIDGFIQNSALNLSN 147
WPSRK EPFRF D S ++SSQI + P + + QFP + ++DG S +S
Sbjct: 82 WPSRKHEPFRFNDFSFLRSSQI--LPAPIPTTTTTATDQFPCHISIVDGHFIQSTSKISE 139
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
DGVYVG+L ++ + KRV + +S GDLFWSINGMGAPDL V+YVP G +VE P+
Sbjct: 140 FSDGVYVGNLSKLNGVVAKRVLELVSGLDGGDLFWSINGMGAPDLTVVYVPEGVRVETPV 199
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
+L Y+S++G +L +SNPRV+V+VE+GGEV I+EEF G E N+CYW+N+VLEVVIG
Sbjct: 200 HLGYVSLQGSKEGGNELYLSNPRVLVVVEKGGEVDIVEEFEGNE-NECYWSNAVLEVVIG 258
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 327
+GGKVRHSY+Q QS+ AAHIKWT+VRQE++S YEL EVSTGGKL RHN+H++QLGPDT T
Sbjct: 259 EGGKVRHSYVQTQSMLAAHIKWTSVRQESSSTYELTEVSTGGKLGRHNLHIKQLGPDTVT 318
Query: 328 ELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
ELS+ HL V +QTQDLHS L+LDHPRGY RQ+HKCIVAHS GQAVFDGNVKVNR
Sbjct: 319 ELSTLHLSVGNQTQDLHSSLVLDHPRGYSRQIHKCIVAHSQGQAVFDGNVKVNR 372
>gi|388493956|gb|AFK35044.1| unknown [Medicago truncatula]
Length = 450
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/354 (59%), Positives = 263/354 (74%), Gaps = 13/354 (3%)
Query: 31 IRVSLQTTFPQATF--SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTP 88
IR + TF A SDPF++ LAE+LEDS+P+ P PLQ LR +SS +LLS+P
Sbjct: 29 IRTKTRVTFNNAISISSDPFILDLAETLEDSVPT-------PQPLQNLRQASSHSLLSSP 81
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV-LIDGFIQNSALNLSN 147
WPSRK EPFRF D S ++SSQI + P + + QFP + ++DG S +S
Sbjct: 82 WPSRKHEPFRFNDFSFLRSSQI--LPAPIPTTTTTATDQFPCHISIVDGHFIQSTSKISE 139
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
DGVYVG+L ++ + KRV + +S GDLFWSINGMGAPDL V+YVP G +VE P+
Sbjct: 140 FSDGVYVGNLSKLNGVVAKRVLELVSGLDGGDLFWSINGMGAPDLTVVYVPEGVRVETPV 199
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
+L Y+S++G +L +SNPRV+V+VE+GGEV I+EEF G E N+CYW+N+VLEVVIG
Sbjct: 200 HLGYVSLQGSKEGGNELYLSNPRVLVVVEKGGEVDIVEEFEGNE-NECYWSNAVLEVVIG 258
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 327
+GGKV+HSY+Q QS+ AAHIKWT+VRQE++S YEL EVSTG KL RHN+H++QLGPDT T
Sbjct: 259 EGGKVKHSYVQTQSMLAAHIKWTSVRQESSSTYELTEVSTGSKLGRHNLHIKQLGPDTVT 318
Query: 328 ELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
ELS+ HL V +QTQDLHS L+LDHPRGY RQ+HKCIVAHS GQAVFDGNVKVNR
Sbjct: 319 ELSTLHLSVGNQTQDLHSSLVLDHPRGYSRQIHKCIVAHSQGQAVFDGNVKVNR 372
>gi|356541420|ref|XP_003539175.1| PREDICTED: protein ABCI7, chloroplastic-like [Glycine max]
Length = 452
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/385 (55%), Positives = 264/385 (68%), Gaps = 39/385 (10%)
Query: 1 MSALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSL 60
M+ + FSP +P + P P K+RV Q +A SDP+V++LAE+LEDS
Sbjct: 1 MNGIGFSP-----AGYSP-VIPSSSCFPKKLRVQPQ----RALSSDPYVLELAETLEDSF 50
Query: 61 PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL 120
PSS S+ PLPLQ LR SSSQ+LLSTPWPSR+DEPFRFTD S I+ S+I P++ P+ SL
Sbjct: 51 PSSPST---PLPLQNLRLSSSQSLLSTPWPSRRDEPFRFTDLSFIRQSRILPVS-PTISL 106
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL 180
T S+LP+ VYVGSL S +++RVS FI F GDL
Sbjct: 107 LTPT---------------------SHLPNDVYVGSLSSSSPSLLQRVSHFICPFPIGDL 145
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK--KLPISNPRVVVLVEEG 238
F+SING+ APDL ++YVP GC V+ PI+L Y+ + D + +SNPRV+V+VE+G
Sbjct: 146 FFSINGIAAPDLTLVYVPEGCHVDIPIHLDYMLPPTPSTDDSDAAMHLSNPRVLVVVEKG 205
Query: 239 GEVGIIEEFVG--KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
V IIE+F + ND YW+N+ E VIG+G K+ HSY+Q QS AAHIKWT++RQE
Sbjct: 206 AHVNIIEDFPASPENQNDSYWSNAAFEAVIGQGAKLTHSYIQTQSFRAAHIKWTSIRQEA 265
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
+S YEL EVSTGGKL RHN+H+QQLGPDT TELS+ HL V+DQTQDLHS L+LDHPRGY
Sbjct: 266 SSTYELTEVSTGGKLGRHNLHIQQLGPDTVTELSTLHLSVADQTQDLHSTLVLDHPRGYS 325
Query: 357 RQLHKCIVAHSLGQAVFDGNVKVNR 381
RQLHKCIV HS GQAVFDGN+KVNR
Sbjct: 326 RQLHKCIVTHSQGQAVFDGNIKVNR 350
>gi|116790030|gb|ABK25476.1| unknown [Picea sitchensis]
Length = 474
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 169/343 (49%), Positives = 234/343 (68%), Gaps = 12/343 (3%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
DPFV++LAE LE+S +SS++L L +LR++ ++ + PWPS KDE FRFTD
Sbjct: 36 ALGDPFVLELAEKLEES--ASSNNLKNK-SLHRLRETCTEEVFRRPWPSAKDESFRFTDI 92
Query: 103 SMIKSSQIQPITRPSSSLDV-STDAQFP---SLVLIDGFIQNSALNLSNLPDGVYVGSLL 158
+K S+IQ +S LD+ + P +++LIDG + S + + LP GV+VGSL
Sbjct: 93 KFLKQSKIQVSEPLNSPLDLQGLENGRPGAYTILLIDGLLSTSHSHTAGLPHGVFVGSLS 152
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ D V + GDLF S+NG+G+ DLGV+ VP GCK+E P+++ Y S +GG+
Sbjct: 153 SLPDDY---VLPPLEAADGGDLFSSLNGIGSRDLGVVIVPEGCKLERPLHVVYYSQQGGD 209
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
D + L +SNPR+VV++ +G E+ I+EEF G N YW NSVL V + + ++ HS++Q
Sbjct: 210 -DLQSLCVSNPRLVVVLGKGAEMEIVEEFRGA-ANKSYWTNSVLHVSLEEKAQLCHSFVQ 267
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
Q+ A H+KWT V+Q T S Y+LVE S+GG+LSRHN+ +QQLGPDT TE+S+FHL +
Sbjct: 268 LQNPCAVHMKWTFVQQGTLSSYKLVETSSGGRLSRHNLQIQQLGPDTVTEVSTFHLAGEN 327
Query: 339 QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
QTQDLHS+++L+HPRGY RQLHKCIV HS AVFDGNVKVNR
Sbjct: 328 QTQDLHSKIILNHPRGYSRQLHKCIVTHSSAHAVFDGNVKVNR 370
>gi|302766733|ref|XP_002966787.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
gi|300166207|gb|EFJ32814.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
Length = 469
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/369 (41%), Positives = 219/369 (59%), Gaps = 16/369 (4%)
Query: 29 NKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQP-LPLQKLRDSSSQTLLST 87
++ R++ + D F+++LAE LEDS+ + + L L+ LRD S++ ++
Sbjct: 4 SRARITAPRALAVESRPDFFLLELAEKLEDSVSKGAGEERRSNLVLKALRDGSAEVAVTC 63
Query: 88 PWPSRKDEPFRFTDTSMIKSSQIQPITR-----PSSSLDVSTDAQFPS--LVLIDGFIQN 140
WPS KDE +RFT+ +K S+IQP+ S S + D + S LV +DG +
Sbjct: 64 KWPSSKDEAYRFTNVKFLKDSEIQPLILGEDEVESLSFEGMEDEEDESIRLVFVDGILSP 123
Query: 141 SALNLSNLPDGVYVGSLLGVSD-GIMKRVSDFISEFQC---GDLFWSINGMGAPDLGVIY 196
+ +P VYVGS+LG D + K V I++ D F S+NG+GA DLGV+
Sbjct: 124 ELSKVEGVPPEVYVGSILGAPDEKLQKYVVPRIAQASTLIDKDAFVSLNGIGALDLGVVL 183
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLP----ISNPRVVVLVEEGGEVGIIEEFVGKEG 252
VP K+E PI++ Y S N+ ++ P ++NPR++V+ EG V ++EEF G
Sbjct: 184 VPKDLKLEKPIHVVYYSTPRKNLKNQLEPQVVSMTNPRLLVVASEGATVHLVEEFRGGTE 243
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
+W NSV E+VI G V H +Q Q ++ +K T V QE AS Y+ V+V G KLS
Sbjct: 244 ESSHWTNSVCEIVIESGASVSHDLIQTQERSSVSMKKTYVSQEKASSYKCVDVELGSKLS 303
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 372
RHN+H++QLG DT+T++ +F L DQ QDLHSRL+L+HPRGY RQL KCIV +S G V
Sbjct: 304 RHNLHIEQLGSDTKTDMLTFLLCGRDQVQDLHSRLILNHPRGYARQLQKCIVMNSTGHGV 363
Query: 373 FDGNVKVNR 381
FDGN++VNR
Sbjct: 364 FDGNIRVNR 372
>gi|302761748|ref|XP_002964296.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
gi|300168025|gb|EFJ34629.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
Length = 469
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/369 (41%), Positives = 218/369 (59%), Gaps = 16/369 (4%)
Query: 29 NKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQP-LPLQKLRDSSSQTLLST 87
++ R++ + D F+++LAE LEDS+ + + L L+ LRD S++ ++
Sbjct: 4 SRARITAPRALAVESRPDFFLLELAEKLEDSVSKGAGEERRSNLVLKALRDGSAEVAVTC 63
Query: 88 PWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPS--LVLIDGFIQN 140
WPS KDE +RFT+ +K S+IQP+ S S + D + S LV +DG +
Sbjct: 64 KWPSSKDEAYRFTNVKFLKDSEIQPLIIGGDEVESLSFEGMEDEEGESIRLVFVDGILSP 123
Query: 141 SALNLSNLPDGVYVGSLLGVSD-GIMKRVSDFISEFQC---GDLFWSINGMGAPDLGVIY 196
+ +P VYVGS+L D + K V IS+ D F S+NG+GA DLGV+
Sbjct: 124 ELSKVEGVPPEVYVGSILAAPDEKLQKYVVPRISQASTLIDKDAFVSLNGIGALDLGVVL 183
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLP----ISNPRVVVLVEEGGEVGIIEEFVGKEG 252
VP K+E PI++ Y S N+ ++ P ++NPR++V+ EG V ++EEF G
Sbjct: 184 VPKDLKLEKPIHVVYYSTPRKNLKNQLEPQVVSMTNPRLLVVASEGATVHLVEEFRGGTE 243
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
+W NSV E+VI G V H +Q Q ++ +K T V QE AS Y+ V+V G KLS
Sbjct: 244 ESSHWTNSVCEIVIESGASVSHDLIQTQGRSSVSMKKTYVSQEKASSYKCVDVELGSKLS 303
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 372
RHN+H++QLG DT+TE+ +F L DQ QDLHSRL+L+HPRGY RQL KCIV +S G V
Sbjct: 304 RHNLHIEQLGSDTKTEMLTFLLCGRDQVQDLHSRLILNHPRGYARQLQKCIVMNSTGHGV 363
Query: 373 FDGNVKVNR 381
FDGN++VNR
Sbjct: 364 FDGNIRVNR 372
>gi|413947304|gb|AFW79953.1| hypothetical protein ZEAMMB73_288078 [Zea mays]
Length = 481
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 169/374 (45%), Positives = 233/374 (62%), Gaps = 35/374 (9%)
Query: 18 PKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLR 77
P L +R P + S+ T P SD V+++AE LEDS+ S+S PL L LR
Sbjct: 22 PLLRFRRSYAP--VAASVPRTAP--AVSDDLVLRIAEQLEDSVTSTS-----PL-LDPLR 71
Query: 78 DSSSQTLLSTPWPSRKD-EPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQ-FPSLVLI- 134
+S+ +LLST WP+R+ E FRFTD S ++S PI+ PS D+ + F S VL
Sbjct: 72 SASALSLLSTRWPTRRSSEAFRFTDISYLRS---LPISLPSREPDLKLPSSPFSSHVLFS 128
Query: 135 DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS----EFQCGDLFWSINGMGAP 190
DG + +S+ G +V +L + G + + EF DLF+ N +GA
Sbjct: 129 DGILVSSS--------GAHVSALADLPPGRARDRAAAALAAAAEFAHKDLFYDFNAVGAR 180
Query: 191 DLGVIYVPAGCKV-ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D+ V++VP G KV ++PI++ + N ++ + +SNPRV+V+ E+ EV I+EE G
Sbjct: 181 DVVVVHVPEGVKVADDPIHIMFAYT---NSFAESMLMSNPRVLVVAEKSAEVAIVEEHFG 237
Query: 250 K-EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
E CYWAN V E++I +G +V HSY+Q+QS AAH KWT V+Q+T S YE VEVSTG
Sbjct: 238 AGEEGGCYWANPVAEIIIDEGARVVHSYVQHQSFAAAHTKWTVVQQDTTSKYEFVEVSTG 297
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHS 367
KL+RHN+H++QLGP+TETELS+ HL + Q DLHSRL+LDHPRG+ RQLHKCI A
Sbjct: 298 AKLNRHNLHIEQLGPETETELSTLHLTSQNKQIHDLHSRLILDHPRGFSRQLHKCI-ACG 356
Query: 368 LGQAVFDGNVKVNR 381
G ++FDGN+KVNR
Sbjct: 357 TGNSIFDGNIKVNR 370
>gi|326488209|dbj|BAJ89943.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 508
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 224/352 (63%), Gaps = 34/352 (9%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 73 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 125
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 126 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 174
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYL 212
+ G + F D+F+ N +GA D+ V++VP G K+ +P+++ +
Sbjct: 175 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF- 233
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGG 270
G+ + L +SNPRV+V+ E+G EV I+EE VG+E CYWAN V+++++ +G
Sbjct: 234 -AYSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGA 292
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELS 330
+V HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+TET+LS
Sbjct: 293 RVVHSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLS 352
Query: 331 SFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+FHL + Q DLHSRL+LDHPRG+ RQLHK ++A G +FDGN++VNR
Sbjct: 353 TFHLTSQNKQIHDLHSRLILDHPRGFSRQLHK-LIACGTGNGIFDGNIQVNR 403
>gi|326520878|dbj|BAJ92802.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 224/352 (63%), Gaps = 34/352 (9%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 51 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 103
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 104 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 152
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYL 212
+ G + F D+F+ N +GA D+ V++VP G K+ +P+++ +
Sbjct: 153 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF- 211
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGG 270
G+ + L +SNPRV+V+ E+G EV I+EE VG+E CYWAN V+++++ +G
Sbjct: 212 -AYSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGA 270
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELS 330
+V HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+TET+LS
Sbjct: 271 RVVHSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLS 330
Query: 331 SFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+FHL + Q DLHSRL+LDHPRG+ RQLHK ++A G +FDGN++VNR
Sbjct: 331 TFHLTSQNKQIHDLHSRLILDHPRGFSRQLHK-LIACGTGNGIFDGNIQVNR 381
>gi|326496228|dbj|BAJ94576.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528307|dbj|BAJ93335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 224/352 (63%), Gaps = 34/352 (9%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 51 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 103
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 104 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 152
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYL 212
+ G + F D+F+ N +GA D+ V++VP G K+ +P+++ +
Sbjct: 153 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF- 211
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGG 270
G+ + L +SNPRV+V+ E+G EV I+EE VG+E CYWAN V+++++ +G
Sbjct: 212 -AYSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGA 270
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELS 330
+V HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+TET+LS
Sbjct: 271 RVVHSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLS 330
Query: 331 SFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+FHL + Q DLHSRL+LDHPRG+ RQLHK ++A G +FDGN++VNR
Sbjct: 331 TFHLTSQNKQIHDLHSRLILDHPRGFSRQLHK-LIACGTGNGIFDGNIQVNR 381
>gi|326523615|dbj|BAJ92978.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 224/352 (63%), Gaps = 34/352 (9%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 55 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 107
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 108 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 156
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYL 212
+ G + F D+F+ N +GA D+ V++VP G K+ +P+++ +
Sbjct: 157 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF- 215
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGG 270
G+ + L +SNPRV+V+ E+G EV I+EE VG+E CYWAN V+++++ +G
Sbjct: 216 -AYSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGA 274
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELS 330
+V HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+TET+LS
Sbjct: 275 RVVHSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLS 334
Query: 331 SFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+FHL + Q DLHSRL+LDHPRG+ RQLHK ++A G +FDGN++VNR
Sbjct: 335 TFHLTSQNKQIHDLHSRLILDHPRGFSRQLHK-LIACGTGNGIFDGNIQVNR 385
>gi|242056569|ref|XP_002457430.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
gi|241929405|gb|EES02550.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
Length = 479
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 229/374 (61%), Gaps = 35/374 (9%)
Query: 18 PKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLR 77
P L +R + P VS SD V+++AE LEDS+ S+S PL L LR
Sbjct: 21 PLLRFRRSSAP----VSASVARAAPAVSDDLVLRIAEQLEDSVTSTS-----PL-LDPLR 70
Query: 78 DSSSQTLLSTPWPSRKD-EPFRFTDTSMIKSSQIQPITRPSSSLDVST-DAQFPSLVLI- 134
+S+ +LLSTPWP+R+ E FRFTD S ++S PI+ PS D++ + F S VL
Sbjct: 71 SASALSLLSTPWPTRRSSEAFRFTDISYLRS---LPISLPSREPDLALPSSPFSSHVLFS 127
Query: 135 DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWSINGMGAP 190
DG + +S+ G +V +L + G + + DLF+ N +GA
Sbjct: 128 DGILLSSS--------GAHVSTLADLPPGRARDRAAAALAASAEFAHKDLFYDFNAVGAR 179
Query: 191 DLGVIYVPAGCKV-ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D+ V++VP G K+ ++PI++ + G + + +SNPRV+V+ E+ EV I+EE G
Sbjct: 180 DVVVVHVPEGVKMADDPIHILFAYTNSG---AGSMLMSNPRVLVVAEKAAEVAIVEEHFG 236
Query: 250 K-EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
E CYWAN V E++I +G +V HSY+Q QS AAH KWT V+Q+T S YE VEVSTG
Sbjct: 237 AGEEGGCYWANPVAEIIIDEGARVVHSYVQQQSFAAAHTKWTVVKQDTTSKYEFVEVSTG 296
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHS 367
KL+RHN+H++QLGP+TETELS+ HL + Q DLHSRL+LDHPRG+ RQLHKCI A
Sbjct: 297 AKLNRHNLHIEQLGPETETELSTLHLTSQNKQIHDLHSRLILDHPRGFSRQLHKCI-ACG 355
Query: 368 LGQAVFDGNVKVNR 381
G ++FDGN+KVNR
Sbjct: 356 TGNSIFDGNIKVNR 369
>gi|168064389|ref|XP_001784145.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
gi|162664345|gb|EDQ51069.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
Length = 450
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 210/356 (58%), Gaps = 23/356 (6%)
Query: 46 DPFVIQLAESLEDSLPSSSS--SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS 103
D F++ LAE LE+S+PS SL L +LR S++ L+ WP+ KDE +RFTD
Sbjct: 1 DFFLLDLAEKLENSVPSEEQGDSLG-ARALAELRYKSAEQALNLRWPTNKDEAYRFTDVR 59
Query: 104 MIKSSQI-----QPITRPS--SSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGS 156
+K+ I QP + P+ S L + F LV +DG I S + L G YVGS
Sbjct: 60 FLKNLDIAPTPAQPASVPNFESELGLGETEAF-RLVFVDGVISESLSKVEGLSGGAYVGS 118
Query: 157 LLGVS----DGIMKRVSDFISEFQCG---DLFWSINGMGAPDLGVIYVPAGCKVENPIYL 209
+ ++ + + +++ + G DLF +NG+G D G+++ P G ++ PI++
Sbjct: 119 VCKITADSAGSALSQALEYLGKPAAGTQDDLFTFLNGLGVQDAGLVFAPKGVQLSKPIHV 178
Query: 210 KYLSV-EGGNVDSKK---LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
Y S GG+ D ++ + ++ PR++V+ E G V IIE+FVG + YW N V E+
Sbjct: 179 VYYSTGRGGSKDGEEVTSISLATPRLLVVAESGARVEIIEQFVGAP-DQVYWTNQVCEIY 237
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
+ G +V HS Q Q +A HIK T V Q S Y+LVE GG+LSRHN+ V QLG DT
Sbjct: 238 VANGAEVSHSCSQEQERSAVHIKQTHVSQVKKSTYKLVEAEVGGRLSRHNLQVIQLGSDT 297
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+TE S+F L Q QDLHSRL+LDHPRG RQ+HKCIV H LGQAVFDGNVKVNR
Sbjct: 298 QTEFSTFSLSSKRQVQDLHSRLVLDHPRGISRQIHKCIVTHRLGQAVFDGNVKVNR 353
>gi|357127219|ref|XP_003565281.1| PREDICTED: protein ABCI7, chloroplastic-like [Brachypodium
distachyon]
Length = 572
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 214/352 (60%), Gaps = 38/352 (10%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTDTSM 104
D V+++AE LEDS SS PL L LR +S+ +LLSTPWP+R+ +E FRFTD S
Sbjct: 138 DDLVLRIAEQLEDSASSS------PL-LDPLRSASALSLLSTPWPTRRSNEAFRFTDISY 190
Query: 105 IKSSQIQPITRPSSSLDVST------DAQFPSLVLIDGFI----QNSALNLSNLPDGVYV 154
++S PI+ PS + + D + DG + A L++LP G
Sbjct: 191 LRS---LPISLPSQTPSSAPAPPPSSDLGSSHIRFSDGLLVSATGAHAAALADLPPGQAR 247
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV-ENPIYLKYLS 213
+ DLF+ N +G+ D+ V+YVP G K+ ++P+++ + +
Sbjct: 248 DRAAAALAASAEFAHR--------DLFYDFNAVGSSDVAVVYVPEGAKMTDDPVHISF-A 298
Query: 214 VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG---KEGNDCYWANSVLEVVIGKGG 270
G D + +SNPRV+V+ E+G EV I+EE G ++ CYWAN V+++V+ +G
Sbjct: 299 YSGS--DGASMMMSNPRVLVIAEKGAEVAIVEEHFGIGEEDDGACYWANPVVDIVVEEGA 356
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELS 330
+V HSY+Q QS AAH KWT V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+T TELS
Sbjct: 357 RVVHSYVQRQSSAAAHTKWTTVQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETITELS 416
Query: 331 SFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+FHL + Q DLHSRL+LDHPRGY RQLHK ++A G +FDGN+KVNR
Sbjct: 417 TFHLTSQNKQIHDLHSRLILDHPRGYSRQLHK-MIACGTGNGIFDGNIKVNR 467
>gi|356495543|ref|XP_003516636.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
[Glycine max]
Length = 382
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 150/209 (71%), Gaps = 4/209 (1%)
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
F GDLFWSING+ APDL ++Y+P GC V+ PI+L Y+ D+ +L SNPR +V+
Sbjct: 74 FPNGDLFWSINGIAAPDLTLVYIPEGCHVDIPIHLDYMHPPNTTTDAMQL--SNPRFLVV 131
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSV--LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
VE+G + IIEEF + + E VIG+G K+ HSY+Q QS +AHIKWT+
Sbjct: 132 VEKGAQANIIEEFSALKIMKMTLIGVMPAFEAVIGEGAKLTHSYIQTQSFRSAHIKWTSC 191
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
QE + YEL EVSTGGKL R N+H+QQLGPDT TELS+ HL V DQTQDLHS L+LDHP
Sbjct: 192 MQEDSITYELTEVSTGGKLGRCNLHIQQLGPDTVTELSTLHLSVGDQTQDLHSTLVLDHP 251
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
RGY RQLHKCIV HS GQAVFDGN+KVNR
Sbjct: 252 RGYSRQLHKCIVTHSQGQAVFDGNIKVNR 280
>gi|115434288|ref|NP_001041902.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|53791281|dbj|BAD52546.1| putative SufD [Oryza sativa Japonica Group]
gi|113531433|dbj|BAF03816.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|215697126|dbj|BAG91120.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 214/344 (62%), Gaps = 25/344 (7%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTDTS 103
SD V+++AE LEDS+ +SS PL L LR +S+ +LLST WP+R+ +E +RFTD S
Sbjct: 51 SDDLVLRIAEQLEDSVAASS-----PL-LDPLRSASALSLLSTRWPTRRSNEAYRFTDIS 104
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
++S I +R + ++ + DG + +S+ G +V +L + G
Sbjct: 105 YLRSLPISLPSRDAPAVAPPASPYASHVHFSDGVLTSSS--------GAHVSALADLPPG 156
Query: 164 IMK----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV-ENPIYLKYLSVEGGN 218
++ + F DLF+ N +GA D+ V++VP G + ++P+++ + G+
Sbjct: 157 HVRDRAAAALAASAGFADKDLFFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGD 216
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ +SNPRV+V+ E+G EV IIEE G+E CYWAN V+E+++ + KV HSY+Q
Sbjct: 217 ---GSMMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQ 273
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
QS AAH KWT V+Q T+S YE VEVS G +L+RHN+HVQQLGP+T T+LS+FH +
Sbjct: 274 QQSFAAAHTKWTVVQQNTSSNYEFVEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQN 333
Query: 339 -QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q DLHS+L+LDHPRG +Q+H+ ++A G +FDGN+KVNR
Sbjct: 334 KQIHDLHSKLILDHPRGRSQQIHR-LIASGTGNGIFDGNIKVNR 376
>gi|125568868|gb|EAZ10383.1| hypothetical protein OsJ_00219 [Oryza sativa Japonica Group]
Length = 482
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 214/344 (62%), Gaps = 25/344 (7%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTDTS 103
SD V+++AE LEDS+ +SS PL L LR +S+ +LLST WP+R+ +E +RFTD S
Sbjct: 51 SDDLVLRIAEQLEDSVAASS-----PL-LDPLRSASALSLLSTRWPTRRSNEAYRFTDIS 104
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
++S I +R + ++ + DG + +S+ G +V +L + G
Sbjct: 105 YLRSLPISLPSRDAPAVAPPASPYASHVHFSDGVLTSSS--------GAHVSALADLPPG 156
Query: 164 IMK----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV-ENPIYLKYLSVEGGN 218
++ + F DLF+ N +GA D+ V++VP G + ++P+++ + G+
Sbjct: 157 HVRDRAAAALAASAGFADKDLFFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGD 216
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ +SNPRV+V+ E+G EV IIEE G+E CYWAN V+E+++ + KV HSY+Q
Sbjct: 217 ---GSMMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQ 273
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
QS AAH KWT V+Q T+S YE VEVS G +L+RHN+HVQQLGP+T T+LS+FH +
Sbjct: 274 QQSFAAAHTKWTVVQQNTSSNYEFVEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQN 333
Query: 339 -QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q DLHS+L+LDHPRG +Q+H+ ++A G +FDGN+KVNR
Sbjct: 334 KQIHDLHSKLILDHPRGRSQQIHR-LIASGTGNGIFDGNIKVNR 376
>gi|224126311|ref|XP_002329523.1| predicted protein [Populus trichocarpa]
gi|222870232|gb|EEF07363.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/137 (85%), Positives = 124/137 (90%), Gaps = 2/137 (1%)
Query: 247 FVGKEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
FV KEGND YWAN VLEVVIGKG KVRHSY+Q+QSLN+AHIKWTAVRQE AS YELVE
Sbjct: 15 FVSKEGNDDKRYWANPVLEVVIGKGAKVRHSYVQSQSLNSAHIKWTAVRQEAASSYELVE 74
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 364
VSTGGKLSRHN+HVQQLGPDT TELS+FHL V DQTQDLHSRL+LDHPRGY +QLHKCIV
Sbjct: 75 VSTGGKLSRHNLHVQQLGPDTATELSTFHLSVGDQTQDLHSRLVLDHPRGYSQQLHKCIV 134
Query: 365 AHSLGQAVFDGNVKVNR 381
AHS GQAVFDGNVKVNR
Sbjct: 135 AHSQGQAVFDGNVKVNR 151
>gi|255635600|gb|ACU18150.1| unknown [Glycine max]
Length = 276
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/160 (68%), Positives = 130/160 (81%), Gaps = 2/160 (1%)
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVG--KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ +SNPRV+V+VE+G V IIE+F + ND YW+N+ E VIG+G K+ HSY+Q QS
Sbjct: 15 MHLSNPRVLVVVEKGAHVNIIEDFPASPENQNDSYWSNAAFEAVIGQGAKLTHSYIQTQS 74
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
AAHIKWT++RQE +S YEL EVSTGGKL RHN+H+QQLGPDT TELS+ HL V+DQTQ
Sbjct: 75 FRAAHIKWTSIRQEASSTYELTEVSTGGKLGRHNLHIQQLGPDTVTELSTLHLSVADQTQ 134
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DLHS L+LDHPRGY RQLHKCIV HS GQAVFDGN+KVNR
Sbjct: 135 DLHSTLVLDHPRGYSRQLHKCIVTHSQGQAVFDGNIKVNR 174
>gi|356507151|ref|XP_003522334.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
[Glycine max]
Length = 401
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/225 (51%), Positives = 151/225 (67%), Gaps = 11/225 (4%)
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYL-----SVEGGN 218
+++ S FI F GD F SI+G+ APDL + YV G V+ I L + + EG
Sbjct: 79 FIRQFSQFICTFPIGDFFCSISGIAAPDLTLAYVLEGFHVDILIQLDNMHPPTPTTEG-- 136
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKE--GNDCYWANSVLEVVIGKGGKVRHSY 276
S + + NPRV+++VE+G IIE+F+ + ND Y N+ E +IG+G K+ HSY
Sbjct: 137 --SDAMQLFNPRVLIIVEKGEHFNIIEDFLASQENQNDSYXRNATFEAMIGQGAKLTHSY 194
Query: 277 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 336
+Q S +AAHIKWT++RQE +S YEL +VST GKL RHN+++ QLGP T ELS+ HL V
Sbjct: 195 IQTXSFHAAHIKWTSIRQEASSTYELTKVSTRGKLGRHNLYIXQLGPYTIIELSTLHLSV 254
Query: 337 SDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DQT DLH+ L+LDHPRGY QLHKCIV HS G+ VFDGN+KVNR
Sbjct: 255 DDQTLDLHNTLVLDHPRGYSXQLHKCIVTHSEGEIVFDGNIKVNR 299
>gi|326509811|dbj|BAJ87121.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 153/211 (72%), Gaps = 7/211 (3%)
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
F D+F+ N +GA D+ V++VP G K+ +P+++ + G+ + L +SNPRV+V
Sbjct: 201 FSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF--AYSGSDGASSLMMSNPRVLV 258
Query: 234 LVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 291
+ E+G EV I+EE VG+E CYWAN V+++++ +G +V HSY+Q QS AAH KWT
Sbjct: 259 IAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTT 318
Query: 292 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLD 350
V+Q T+S YE VEVSTG +L+RHN+H+QQLGP+TET+LS+FHL + Q DLHSRL+LD
Sbjct: 319 VQQNTSSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHSRLILD 378
Query: 351 HPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
HPRG+ RQLHK ++A G +FDGN++VNR
Sbjct: 379 HPRGFSRQLHK-LIACGTGNGIFDGNIQVNR 408
>gi|159490004|ref|XP_001702979.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158270886|gb|EDO96717.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 482
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 174/318 (54%), Gaps = 10/318 (3%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR----PSSSLDV-ST 124
P L LR+ S L + P+ ++E +RFTD + + + +QP PS L
Sbjct: 62 PSSLAALREQSKSALATLRMPTTRNEDYRFTDIAPLLRTNVQPAAAGAAVPSELLAAHEL 121
Query: 125 DAQFPSLVLIDGFIQ-NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
LV++DG ++ + LS LP G YVG L G + + +++ + G F
Sbjct: 122 PGAAARLVVVDGVLRPELSSGLSGLPAGTYVGPLAGAPEAVKQKLGSLSNSR--GGPFAV 179
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+NG P++ V+ VPA ++E P+++ +L+ G + ++ + PR+++ G +
Sbjct: 180 LNGSLVPEVLVVAVPAERQLEGPLFVLHLA--SGATGADEVAANAPRLLLHAGTGSSAEL 237
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
+EE+V G Y +V E+ + VRHSY+Q + + H K T V Q S Y L
Sbjct: 238 VEEYVALPGGRRYLTVAVGELFLEAAASVRHSYVQREGEGSFHFKSTLVHQAERSQYTLA 297
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 363
E S GG ++RH++ +QQ GP+T T++S F L QT DLHSRL LDHP G QLHKCI
Sbjct: 298 EASVGGAIARHDLVIQQGGPETHTQMSHFLLCGPSQTHDLHSRLTLDHPHGTANQLHKCI 357
Query: 364 VAHSLGQAVFDGNVKVNR 381
V+H+ G+ VFDGNVKVNR
Sbjct: 358 VSHASGRGVFDGNVKVNR 375
>gi|255071939|ref|XP_002499644.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226514906|gb|ACO60902.1| ATP-binding cassette superfamily, partial [Micromonas sp. RCC299]
Length = 406
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 175/319 (54%), Gaps = 14/319 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ---IQPITRPSSSLDVST--DAQ 127
++ LR + ++L P+ + E +RFTD + + +S+ P S T DA
Sbjct: 6 VEALRSRAIESLKRARVPNSRVEDYRFTDLAPLLTSKPVAADPAAASSVDAAAWTLADAD 65
Query: 128 FPSLVLIDGFIQNSALNL--SNLPDGVYVGSL-LGVSDGIMKRVSDFISEFQCGDLFWSI 184
+VL+DG A N+ +N DGV V ++ LG S G +S + +F I
Sbjct: 66 ATRVVLVDGAFNADASNVTGANDVDGVVVSTVSLGASSGFAI---GEVSAVRGAGVFAEI 122
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N A D VI VPAG + PI++ LS D + + S PRV V V EG V I+
Sbjct: 123 NAATASDAVVINVPAGKSLSAPIHIVQLSTSAATKDGE-MSSSAPRVAVHVGEGASVSIV 181
Query: 245 EEFVGKEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
EEF G++ YW N V E+V+ KG KV H+ +Q Q+ A H + T + Q S Y+L
Sbjct: 182 EEFAAAGGSEDGAYWHNGVCELVLEKGAKVTHTMVQAQTRAAVHTRATHLTQAEESEYKL 241
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
E++ GGKL RH++ V QLGP T TEL+ F+L Q DLHS++ LDH G Q+HKC
Sbjct: 242 AEINVGGKLGRHDLGVTQLGPRTNTELACFNLAGEGQCLDLHSKVTLDHEEGTTDQVHKC 301
Query: 363 IVAHSLGQAVFDGNVKVNR 381
IV+H+ G+ VFDGNV+VNR
Sbjct: 302 IVSHASGRGVFDGNVQVNR 320
>gi|218187437|gb|EEC69864.1| hypothetical protein OsI_00223 [Oryza sativa Indica Group]
Length = 283
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +SNPRV+V+ E+G EV IIEE G+E CYWAN V+E+++ + KV HSY+Q QS
Sbjct: 20 MMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQQQSFA 79
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD-QTQD 342
AAH KWT V+Q T+S YE VEVS G +L+RHN+HVQQLGP+T T+LS+FH + Q D
Sbjct: 80 AAHTKWTVVQQNTSSNYEFVEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQNKQIHD 139
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
LHS+L+LDHPRG +Q+H+ ++A G +FDGN+KVNR
Sbjct: 140 LHSKLILDHPRGRSQQIHR-LIASGTGNGIFDGNIKVNR 177
>gi|145349023|ref|XP_001418940.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
gi|144579170|gb|ABO97233.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
Length = 383
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 174/297 (58%), Gaps = 18/297 (6%)
Query: 90 PSRKDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVST---DAQFPSLVLIDGFIQNSALNL 145
P+ + E +RFTD S + ++ + P + +S D S + ++VL+DG + + +
Sbjct: 1 PTNRAEEYRFTDFSALTTATLVGP--KEGASADASATRVEDACATVVLVDGVLDATQSDF 58
Query: 146 SNLPD-GVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE 204
G+ + +G +D + S G++F +IN A D+ V+ VP G K
Sbjct: 59 EGAAKAGIKIS--VGAADATTGKQS-----ATRGNVFAAINSASAADVVVVRVPKGVKCA 111
Query: 205 NPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEV 264
+P+++ +S G N ++ +S PR+ ++VEE GE+ ++E+F G EG YW N V E+
Sbjct: 112 SPVHIVTMSTGGENGATR---VSAPRITIVVEEEGELCVVEDFAG-EGETEYWQNGVCEI 167
Query: 265 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 324
+ KG ++H+ +QN A H + T V Q S YE+ E+S GGK +RH+++++QLGP
Sbjct: 168 AVEKGASMKHALIQNHGRGATHTRTTLVTQAEDSKYEVNEISVGGKTARHDLNIKQLGPR 227
Query: 325 TETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
TET L F+L S+QT DLHS+L LDH G Q+HKCIV+ + G+ VFDGNV+VNR
Sbjct: 228 TETVLGCFNLAGSNQTLDLHSKLQLDHEEGSSNQVHKCIVSAASGKGVFDGNVQVNR 284
>gi|296087515|emb|CBI34104.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/113 (77%), Positives = 104/113 (92%)
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G KV+HSY+Q+QSL+AAHIKWT+V+Q ++ YEL+EVSTGGKLSRHNV++QQ+GPDT TE
Sbjct: 20 GAKVKHSYIQSQSLSAAHIKWTSVQQGSSGSYELIEVSTGGKLSRHNVNIQQVGPDTVTE 79
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
LS+FHL V D TQDLH+RL+LDHPRGY RQLHKCIVAHSLGQAVFDGN+KVNR
Sbjct: 80 LSAFHLSVGDPTQDLHTRLVLDHPRGYFRQLHKCIVAHSLGQAVFDGNIKVNR 132
>gi|308806105|ref|XP_003080364.1| unnamed protein product [Ostreococcus tauri]
gi|116058824|emb|CAL54531.1| unnamed protein product [Ostreococcus tauri]
Length = 430
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 179/319 (56%), Gaps = 24/319 (7%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVS---TDA 126
L ++ + + L P+ ++E +RFTD S + ++ + P R + D S
Sbjct: 18 LAVKNASEEARALLEGAKAPTTRNEEYRFTDFSALTTAAFVGP--REDARCDASGTKVAE 75
Query: 127 QFPSLVLIDGFIQNSALNLSNLPD-GVYVGSLLGVSD---GIMKRVSDFISEFQCGDLFW 182
+VL+DG + + +L+N GV V +G D G+ V G++F
Sbjct: 76 ACARIVLVDGALDATQSDLTNAAKAGVDV--RVGEGDETTGVQSAVR--------GNVFS 125
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+IN A D+ V+ V G K PI++ LS G DS + +S PRV +++EE E+
Sbjct: 126 AINSASASDVVVVKVAKGVKCAMPIHIVTLSTGG---DSGAMRVSAPRVTIVLEEDAELS 182
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E+F G EG YW N V E+ + KG ++HS +QN +A H + T V Q S YE
Sbjct: 183 VVEDFAG-EGETEYWQNGVCEITLAKGASMKHSLIQNHGRSATHTRTTLVTQAEGSRYEA 241
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
EVS GGK +RH+++++QLGP TET L F+L ++QT DLHS++LLDH G QLHKC
Sbjct: 242 NEVSVGGKTARHDLNIKQLGPRTETVLGCFNLAGAEQTLDLHSKVLLDHEEGVSDQLHKC 301
Query: 363 IVAHSLGQAVFDGNVKVNR 381
IV+ + G+ VFDGNV+VNR
Sbjct: 302 IVSAASGRGVFDGNVQVNR 320
>gi|307103250|gb|EFN51512.1| hypothetical protein CHLNCDRAFT_59225 [Chlorella variabilis]
Length = 495
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 179/349 (51%), Gaps = 23/349 (6%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+ +LE +P S++ LP+PL L+ S L + P+ ++E +RFTD + +
Sbjct: 55 IERTLEVIVPESAA-LPKPLA--SLQASCLSALATLRMPTTRNEEYRFTDLRSLLQHSLG 111
Query: 112 PITRPSSSLDVSTDAQFPSLVLI-----DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
P + V + DG I ++ +LP GVYVG L+G I+
Sbjct: 112 PTAGAAPDAAVRAACSLKQVAAATVVVADGVIDQQQSSIRDLPAGVYVGGLVGAPQDIVS 171
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
S + G F ++NG A D+ V++VPA + PI++ YL+ + P+
Sbjct: 172 LALGAQSRSR-GGPFATLNGAAAQDVVVVHVPASTVMPGPIHVLYLASSAAAASGGRAPV 230
Query: 227 SNPRVVVLVEEGGEVGIIEEFVG--------------KEGNDCYWANSVLEVVIGKGGKV 272
+ PR++ ++E+G I+EEF G + + Y+ ++V E + +
Sbjct: 231 AMPRLLAVLEKGAVADIVEEFAGPAAAAPLAPADAKTADSSLNYFTDAVAEFELDDSAVL 290
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 332
+HSY+Q +S AH+K T V Q S Y L E GG LSRH+++++QLG T +E+ SF
Sbjct: 291 KHSYVQLESTGVAHMKATLVNQGRKSSYSLTEARVGGTLSRHDLNIEQLGEGTHSEMRSF 350
Query: 333 HLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L Q DLHS+L LDHP G QLHKCIV+ G+ VFDGNV+VNR
Sbjct: 351 LLCGDGQLHDLHSKLTLDHPNGEANQLHKCIVSSPTGRGVFDGNVRVNR 399
>gi|303277771|ref|XP_003058179.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226460836|gb|EEH58130.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 492
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 172/325 (52%), Gaps = 23/325 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD-------VSTD 125
++ LR + L P+ + E FRFTD + + + Q P +S D
Sbjct: 68 VESLRAGAVTQLARARMPTSRAEEFRFTDLAPLLTKQ--PTAADASKADDVDASAWTFEA 125
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF-----ISEFQCGDL 180
A +VL+DG + ++ + G G+ + VS + ++ G +
Sbjct: 126 ASASRVVLVDGVFRADKSSIDAIAKG---GAKISVSAAAAGDAAPPAALGSMTSTGRGGV 182
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
S+N + A D + VPAG ++ PI++ LS G D+ +L S PR+V+ V E
Sbjct: 183 LASLNAVMASDFVHVDVPAGVTLDVPIHIVQLSTSGD--DAAELSSSAPRIVITVGERAS 240
Query: 241 VGIIEEFV---GKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
V ++EEF G + C YW N V E+VI K G+V H+ +Q Q+ NA H + T + Q
Sbjct: 241 VEVVEEFAPAPGVSDDACGYWHNGVCEIVIEKDGRVTHAMVQAQTRNAVHTRLTTLTQAE 300
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
+S Y L EV+ GGK+ RH++ ++QLGP T TELS F+L + Q DLHS + LDH G
Sbjct: 301 SSTYALAEVNVGGKIGRHDLGIEQLGPRTVTELSCFNLAGAGQCMDLHSSVTLDHEEGKT 360
Query: 357 RQLHKCIVAHSLGQAVFDGNVKVNR 381
Q+HKCIV+ + G+ VFDGNVKVN+
Sbjct: 361 DQVHKCIVSSASGRGVFDGNVKVNK 385
>gi|17229986|ref|NP_486534.1| hypothetical protein alr2494 [Nostoc sp. PCC 7120]
gi|17131586|dbj|BAB74193.1| alr2494 [Nostoc sp. PCC 7120]
Length = 453
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 175/312 (56%), Gaps = 12/312 (3%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-ITRPS--SSLDVSTDAQFP 129
LQ+LR S++ + + P+ ++E +RFTD S ++ + Q +P+ S+L +S +A
Sbjct: 45 LQELRGSAANWVRHSTIPTTREEEWRFTDLSALRRVEFQQGEVKPADISALSLS-EAANN 103
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMG 188
LV ++G +++LP G+ V +L + +RV ++++ + ++F ++N G
Sbjct: 104 RLVFVNGVYAPDLSAVADLPPGIVVDNLSALPITEQERVQKYLAQSEGALEVFTALNTAG 163
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D+ V+ V VE PI+L +++V G + IS PR +V+ E G +V +IEEFV
Sbjct: 164 ISDVAVVLVAKNVIVETPIHLVFIAVAG-----ETATISQPRCLVVAESGSQVSVIEEFV 218
Query: 249 GKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 307
++ Y N+V E+ I +V H+ ++N+S A HI TAV Q S Y V+
Sbjct: 219 TPNVDEGVYLTNAVTEITIADNAQVVHTRVENESKQAFHIGKTAVTQARYSRYTCHAVTL 278
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 367
GGK+SRHN+ + Q G TET L+ ++ ++Q D HS + L+HP G +QLHKCIV
Sbjct: 279 GGKISRHNLEILQTGEQTETTLNGLTMVATNQLADTHSAIALNHPYGTSKQLHKCIVGDR 338
Query: 368 LGQAVFDGNVKV 379
AVF+G V V
Sbjct: 339 -AHAVFNGKVFV 349
>gi|434397830|ref|YP_007131834.1| Iron-regulated ABC transporter permease protein SufD [Stanieria
cyanosphaera PCC 7437]
gi|428268927|gb|AFZ34868.1| Iron-regulated ABC transporter permease protein SufD [Stanieria
cyanosphaera PCC 7437]
Length = 444
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 14/339 (4%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
SDPF++++ + S+P L+ LR+ S+ + +PS+KDE +RFTD S
Sbjct: 15 SDPFLLKILQQ-RSSVPKEKLDSETSTWLENLREQSASWVSRLKFPSKKDEEWRFTDLSS 73
Query: 105 IKS---SQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
+ + + T S ++D+ +A +V ++G N S LP G+YVG+L +
Sbjct: 74 LLDLDFTAAKSGTVESDTIDLIPEATESRIVFVNGLYAPELSNTSGLPKGIYVGNLTNLP 133
Query: 162 DGIMKRVSDFI-SEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ K ++ ++ ++F S+N D+ +I+ VE PI+L ++SV ++
Sbjct: 134 EAYCKYFRPYLGTQAGAEEVFTSLNTASITDVAIIWAAPNTVVEQPIHLLFISVTEDSIS 193
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
S PR ++ E+ + IIEE+ G+ Y N+V E+ +G+ ++ H+ Q +
Sbjct: 194 -----FSQPRSWIVAEKNCSLNIIEEYTGQ---SSYLTNAVTEIWLGENAQINHTRFQTE 245
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
S A HI TAV Q AS Y L E + GGK+SRHN + Q G TET L+ + +QT
Sbjct: 246 SETAYHIGKTAVSQARASRYTLTEFNFGGKISRHNPEISQQGEQTETYLNGLTVANGEQT 305
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
D HS + L P G QLHKC+V+ +F+G V V
Sbjct: 306 ADTHSIIALSKPHGTTNQLHKCLVSDR-AHTIFNGKVFV 343
>gi|75906651|ref|YP_320947.1| FeS assembly protein SufD [Anabaena variabilis ATCC 29413]
gi|75700376|gb|ABA20052.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
variabilis ATCC 29413]
Length = 454
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 170/316 (53%), Gaps = 19/316 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP--- 129
LQ+LR+ ++ + + P+ ++E +RFTD S ++ + ++ DV +
Sbjct: 45 LQELRERATNWVRHSVIPNTREEEWRFTDLSALRRVEFHH----AAHTDVEKLHEMSLRG 100
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSI 184
LV ++G N++NLP G+ VG+L + +RV ++++ + ++F ++
Sbjct: 101 TGDNGLVFVNGVYTPELSNIANLPTGIVVGNLSALPITEQERVQKYLAQSEGALEVFTAL 160
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N G D+ V+ V VE PI+L ++SV + IS PR +V+ E G +V ++
Sbjct: 161 NTAGISDVAVVLVAKNVIVETPIHLLFVSVA-----DETATISQPRCLVVAESGSQVSVV 215
Query: 245 EEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
EEFV ++ Y N+V E+ I +V H+ ++N+S A HI TAV Q S Y
Sbjct: 216 EEFVTPNADEGVYLTNAVTEITIADNAQVVHTRIENESKQAFHIGKTAVTQGRYSRYTCH 275
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 363
++ GGK+SRHN+ + Q G TET L+ ++ S+Q D HS + L+HP G +QLHKCI
Sbjct: 276 AITLGGKISRHNLEILQTGEQTETTLNGLTMIASNQLADTHSAIALNHPYGTSKQLHKCI 335
Query: 364 VAHSLGQAVFDGNVKV 379
V AVF+G V V
Sbjct: 336 VGDR-AHAVFNGKVFV 350
>gi|428318184|ref|YP_007116066.1| Iron-regulated ABC transporter permease protein SufD [Oscillatoria
nigro-viridis PCC 7112]
gi|428241864|gb|AFZ07650.1| Iron-regulated ABC transporter permease protein SufD [Oscillatoria
nigro-viridis PCC 7112]
Length = 444
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 174/323 (53%), Gaps = 24/323 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS----------SLDV 122
L LRD ++Q +LS+ +P+ KDE +RFTD S + QI P+ P S ++ V
Sbjct: 35 LDDLRDIAAQYVLSSHFPTVKDEEWRFTDLSPLL--QI-PLHLPESNQPEIKLSDITMPV 91
Query: 123 STDAQFP-SLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCG 178
A P LV ++GF S +NL NLP Y G+L V + R+SD +S+ Q
Sbjct: 92 KDRADLPLRLVFVNGFYAPHLSTVNLPNLPLDFYAGNLSNVPEKYQGRISDVLSKHRQQT 151
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
++F ++N G D V++VPA ++ PI+L +L+ G + +S P V+ E G
Sbjct: 152 EVFTALNTAGLTDSAVVFVPANMSIDLPIHLLFLTAPGASPT-----MSQPHCSVIAEPG 206
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
V ++E++ GN + N+V +V++G+ V H LQ ++ HI +A+ Q S
Sbjct: 207 SNVTLVEDY-ATIGNVAAFTNAVTDVLVGENATVNHVRLQREAGEVVHIGKSAIEQSRNS 265
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
Y +S GGK+SRHN+ V Q G T+T L+ + +Q D HS + +HP G RQ
Sbjct: 266 RYTCHAISLGGKISRHNLEVFQRGEATKTTLNGLSVAFGEQLSDTHSVIDFNHPHGTSRQ 325
Query: 359 LHKCIVAHSLGQAVFDGNVKVNR 381
LHKCIV + +AVF+G V V +
Sbjct: 326 LHKCIVGNK-ARAVFNGKVFVRK 347
>gi|427731168|ref|YP_007077405.1| FeS assembly protein SufD [Nostoc sp. PCC 7524]
gi|427367087|gb|AFY49808.1| FeS assembly protein SufD [Nostoc sp. PCC 7524]
Length = 457
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 169/315 (53%), Gaps = 14/315 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI-TRPSSSLDVST----DAQ 127
LQ+LRD ++ + + P+ ++E +RFTD S + + + T P++SLD++ ++
Sbjct: 45 LQELRDRAANWVRHSTIPTTREEEWRFTDLSALCQVEFNHVETLPATSLDITGLTLPESH 104
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSING 186
+ LV ++G +++LP G+ VG+L + +RV +++ + ++F ++N
Sbjct: 105 YSRLVFVNGVYSPELSAVADLPAGIVVGNLTTLPLTEQERVQQHLAQAEGALEVFTALNT 164
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D+ V+ V VE PI+L +++V G + IS PR +V+ E G +V +IE+
Sbjct: 165 AGISDVAVVLVAKNLVVETPIHLLFITVAG-----ETATISQPRCLVVAESGSQVSVIED 219
Query: 247 FVG--KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
+V + Y N+V E+ I V H ++ S A HI TAV Q S Y
Sbjct: 220 YVTIPQREETVYLTNTVTEIAIADNAHVTHIRVERDSQAAFHIGKTAVTQARYSRYSCHA 279
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 364
++ G KLSRHN+ + Q G TET L+ ++ +Q D HS + L+HP G +QLHKCIV
Sbjct: 280 ITLGAKLSRHNLEILQTGEQTETTLNGLTMIAGNQVADTHSAIALNHPYGTSKQLHKCIV 339
Query: 365 AHSLGQAVFDGNVKV 379
AVF+G V V
Sbjct: 340 GDR-AHAVFNGKVFV 353
>gi|443326002|ref|ZP_21054671.1| FeS assembly protein SufD [Xenococcus sp. PCC 7305]
gi|442794383|gb|ELS03801.1| FeS assembly protein SufD [Xenococcus sp. PCC 7305]
Length = 435
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 166/309 (53%), Gaps = 11/309 (3%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSL 131
LQ +R+ S+ + P+ KDE +RFTD +S++ + P + + +A+ L
Sbjct: 39 LQTIREQSASWVSKLTLPTTKDEEWRFTDISSLLDREFVAPKSFTTDKNITIPEAEDTRL 98
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
V ++G N+S LP G+YVGSL + + + F+ + +F S+N
Sbjct: 99 VFVNGSYAAELSNISGLPQGIYVGSLTNLPENFCQYFRPFLGTLPGKEEVFTSLNTASIA 158
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
D+ +I+ VE PI+L ++SV G + + IS PR ++ E+ ++ I+EE+ G
Sbjct: 159 DVAIIWAAPNTVVEKPIHLVFVSVAG-----ESITISQPRGWIVAEKNCQLTIVEEYSGA 213
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
Y N+V E+ +G+ ++ H+ LQ +S+ A HI TAV Q+ S Y L E++ GG+
Sbjct: 214 ---SSYITNAVTEIWLGENAQINHTRLQQESVTAYHIGKTAVNQKQDSRYTLTEINVGGQ 270
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 370
+SRH+ + Q G TET L+ + +QT D HS + L+HP G QLHK IV+
Sbjct: 271 ISRHSPEIHQAGAQTETNLNGLTIAKEEQTSDTHSVINLNHPHGTTDQLHKTIVSDR-AH 329
Query: 371 AVFDGNVKV 379
A+F+G V V
Sbjct: 330 AIFNGKVSV 338
>gi|443311377|ref|ZP_21041006.1| FeS assembly protein SufD [Synechocystis sp. PCC 7509]
gi|442778574|gb|ELR88838.1| FeS assembly protein SufD [Synechocystis sp. PCC 7509]
Length = 444
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 171/315 (54%), Gaps = 15/315 (4%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST----DA 126
L LQ+LRD +S + P+ +DE +RFTD S ++ T P +D+S+ +A
Sbjct: 37 LLLQELRDRTSSIINLATLPTTRDEEWRFTDLSALRQLNFSENTSPQ--IDISSLILPEA 94
Query: 127 QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSIN 185
+ LV ++G + +++LPDG+ V +L G+ ++ ++++ Q ++F ++N
Sbjct: 95 ENSRLVFVNGVYTSELSRVADLPDGITVSNLAGLPITHRSKIKKYLAQQQGATEVFTALN 154
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
G D+ +++V V+ PI+L ++S S++ +S PR +++ E G V ++E
Sbjct: 155 TSGISDVAIVWVGKNVVVDTPIHLLFVST------SEQPIVSQPRCLLVAESGSNVTVVE 208
Query: 246 EFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
E+ D Y+ NSV E+ + + +V H+ ++ +SL A HI TAV Q S Y
Sbjct: 209 EYKKAGSADTVYFTNSVTEIWLEENAEVSHTRIEQESLEAFHIGKTAVSQARDSRYTCYA 268
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 364
VS GGKLSRHN+ V Q G T+T L + +Q D HS + L++P G QLHKCIV
Sbjct: 269 VSLGGKLSRHNLEVFQAGEQTDTNLFGLTAISGNQVGDTHSAIALNYPHGTTNQLHKCIV 328
Query: 365 AHSLGQAVFDGNVKV 379
+ VF+G V V
Sbjct: 329 SEK-SHGVFNGKVFV 342
>gi|428207029|ref|YP_007091382.1| iron-regulated ABC transporter permease SufD [Chroococcidiopsis
thermalis PCC 7203]
gi|428008950|gb|AFY87513.1| Iron-regulated ABC transporter permease protein SufD
[Chroococcidiopsis thermalis PCC 7203]
Length = 467
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 175/328 (53%), Gaps = 26/328 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLD--VSTDAQ 127
L+++RD +S + + P+ K E +RFTD S +K Q P P++ + ++A
Sbjct: 43 LREIRDRASSIIRQSTLPTTKIEEWRFTDLSALKQFNFQVAAPTGLPAALVTPLTFSEAA 102
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSING 186
L+ I+G + +LP GV V +L G+ RV +++++ + G D+F ++N
Sbjct: 103 NSRLIFINGVYTPEHSAIGDLPKGVVVSNLSGLPAEYRDRVYNYLAKSEAGQDIFTALNT 162
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIE 245
D+ V+++P VE PI+L +++ +S + P I+ PR +V+ E G V ++E
Sbjct: 163 AAITDVAVVWIPKNVVVEAPIHLLFIA------NSFRTPTINQPRCLVVAETGSSVTLVE 216
Query: 246 EFV------------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
+++ + G Y+ N+V E+ +G+ +V H+ ++ +S+ A HI TA+
Sbjct: 217 DYLNQFNIEDPEEGEAEVGETVYFTNAVTEIWLGENAQVSHTRVERESVEAFHIGKTAIT 276
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
Q S Y ++ G KLSRHN+ + Q G TET L+ ++ QT D HS + L++P
Sbjct: 277 QARDSRYTCNAITLGAKLSRHNLDIYQTGEQTETILNGLTIIAGQQTADTHSAIALNYPY 336
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
G RQLHKCIVA VF+G V V +
Sbjct: 337 GMSRQLHKCIVADK-AHTVFNGRVFVAK 363
>gi|302832968|ref|XP_002948048.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
gi|300266850|gb|EFJ51036.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
Length = 492
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 177/341 (51%), Gaps = 23/341 (6%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS-- 117
L + + P L LR++S+ L + P+ ++E +RFTD S + + ++P +
Sbjct: 49 LARTVKDVATPPGLVTLREASTGALATLRMPTTRNEEYRFTDISPLLKTAVEPAAPGAVV 108
Query: 118 -SSLDVSTDA--QFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
S L TD V++DG +++ L++LP GVYVG L G S +++++ +
Sbjct: 109 TSELLQRTDLPDAAVVAVVVDGVLRSELCRGLADLPKGVYVGPLEGASAAVVEKLGSLSN 168
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
G F +NG P + V+ G + P+++ L V + + + PR++V
Sbjct: 169 SR--GGPFAVLNGSLTPGVLVVAAEPGASLPGPVFV--LHVASASSAAAIANANAPRLLV 224
Query: 234 LVEEGGEVGIIEEFVGKEG-------------NDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
G V ++EE+VG E + Y S+ E+ + +V+HSY+Q +
Sbjct: 225 HAGVGSLVEVVEEYVGLEDSTTASAAASASSDHGHYLTVSMAELFLEPAAEVKHSYVQRE 284
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ + H K T V Q S Y + E S G ++RH++ + Q GP+T TE+ F L +Q
Sbjct: 285 AAGSFHFKGTLVHQAERSRYTVTEASVGAAIARHDLTILQGGPETHTEMGHFLLCGPNQL 344
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DLHSRL LDHP G QLHKCIV+H+ G+ VFDGNVKVNR
Sbjct: 345 HDLHSRLQLDHPHGTANQLHKCIVSHASGRGVFDGNVKVNR 385
>gi|119509160|ref|ZP_01628311.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
gi|119466326|gb|EAW47212.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
Length = 457
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 169/316 (53%), Gaps = 16/316 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST----DAQF 128
Q+LR ++ + + P+ ++E +RFTD S ++ Q T+ S +D+S +A
Sbjct: 45 FQELRQGAANWVRHSSIPTTREEEWRFTDLSALRQVQFHVETQLKS-VDISALTLPEAVN 103
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV ++G +++LP GV VG+L G S + V ++++ + ++F ++N
Sbjct: 104 SRLVFVNGVYAPDLSAVADLPSGVVVGNLAGFSKSQQEIVKHYLAQAEGSQEVFTALNTA 163
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
G D V++V VE PI+L +++V G ++ IS PR +V+ E GG V ++E+F
Sbjct: 164 GISDAAVVWVAQNVIVETPIHLLFVAVVG-----EQATISQPRCLVMAETGGSVTVVEDF 218
Query: 248 VGKEGND----CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
+ G + Y N+V EV +G+ +V H+ ++ + A H+ TAV Q S Y
Sbjct: 219 INHRGAEDAEGVYLTNAVTEVWLGENAQVSHTRIEREGAEAFHVGKTAVTQARDSRYTCH 278
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 363
+S GGKLSRHN+ + Q G TET L+ ++ Q D HS + L++P QLHKCI
Sbjct: 279 ALSFGGKLSRHNLEILQTGEQTETTLNGLTMISDRQVGDTHSAIALNYPHSTSTQLHKCI 338
Query: 364 VAHSLGQAVFDGNVKV 379
V AVF+G V V
Sbjct: 339 VGDR-AHAVFNGKVFV 353
>gi|384245333|gb|EIE18827.1| stabilizer of iron transporter SufD [Coccomyxa subellipsoidea
C-169]
Length = 518
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 172/342 (50%), Gaps = 40/342 (11%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+A +L S+++ P P++++R + L S P+ ++E +RFTD + I Q++
Sbjct: 96 IARTLAAFRKDSANAQTLPGPMEEMRMDCTVALRSQRMPTTRNEEYRFTDIAPIL--QLE 153
Query: 112 P------ITRPSSSLDVSTDAQ-----FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
P P ++ +A +V+IDG + + LP
Sbjct: 154 PQVAASATVLPGEAIAALVEASPLKEAVARVVVIDGVVARQLSDTDRLPQ---------- 203
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
G R+ G F ING A D+ I VP G VE PI++ Y++ NV
Sbjct: 204 -QGKQARLR--------GSPFALINGATAEDVLCIDVPEGVSVEGPIHVLYITSGASNVV 254
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ PR++ + ++EEFVG +G + ++ N+V E+ + +++H Y+
Sbjct: 255 A-------PRLLCTLGADSSAEVVEEFVGPAKGAEPHFTNAVAEINLADRAQIKHGYVAL 307
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+ A H+K T VRQ S Y+L E GG+L+R ++ ++Q G +T+TE+ SF L +Q
Sbjct: 308 EGRRALHMKGTLVRQAAQSSYKLTEARLGGRLTRQDLFIEQTGEETQTEMGSFLLCGDEQ 367
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DLHS+L L+HPRG QLHKCIVA G+ VFDG VKV +
Sbjct: 368 LHDLHSKLRLEHPRGTANQLHKCIVAAGRGRGVFDGAVKVEQ 409
>gi|428215690|ref|YP_007088834.1| FeS assembly protein SufD [Oscillatoria acuminata PCC 6304]
gi|428004071|gb|AFY84914.1| FeS assembly protein SufD [Oscillatoria acuminata PCC 6304]
Length = 457
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 181/359 (50%), Gaps = 25/359 (6%)
Query: 40 PQATFSDPFVIQLAESLEDSL-PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFR 98
PQ ++ D + Q S + P+ + P LQ++RD+++ + P+RKDE +R
Sbjct: 9 PQVSYLDELLKQAVASPAPVVNPAYGMAPPTAALLQQVRDNAATWVRELAMPTRKDEEWR 68
Query: 99 FTDTSMIKSSQIQPITRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDG 151
TD S +++ Q P ++ + A F LV ++G N+S LP+G
Sbjct: 69 VTDLSGLQALTFQ--AAPPEAIPTTGVAPFELPEMLDSRLVFVNGCYSAELSNVSGLPEG 126
Query: 152 VYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLK 210
++VG+L + + ++ ++ ++F S+N G D V+++ V+ PI+L
Sbjct: 127 IFVGNLGQLPPSLQTQLPKYLGNVDGNKEVFTSLNTAGLMDAAVVWIAKDVAVDKPIHLL 186
Query: 211 YLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC--------YWANSVL 262
+++V G + PR +++ E G IEE+V + + C Y+ N+V
Sbjct: 187 FMAVPGAQPR-----LVQPRCLIVAERGSRCTAIEEYVVADDDSCGNFKGNAPYFTNAVT 241
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
E+ + + +V H+ +Q +S N+ HI TA+ Q S Y VSTGG LSRH++ V Q G
Sbjct: 242 EIWVAETAQVTHAKIQRESTNSFHIGKTAIAQAKDSNYSCTAVSTGGLLSRHHLEVYQQG 301
Query: 323 PDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
T T L+ + Q D HS ++L+HP G +QLHKCI+ + Q VF+G V V +
Sbjct: 302 EGTYTTLNGLAIAAGKQVSDTHSAIVLNHPNGTSKQLHKCIIDDA-AQGVFNGKVFVPK 359
>gi|427719480|ref|YP_007067474.1| iron-regulated ABC transporter permease SufD [Calothrix sp. PCC
7507]
gi|427351916|gb|AFY34640.1| Iron-regulated ABC transporter permease protein SufD [Calothrix sp.
PCC 7507]
Length = 459
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 167/313 (53%), Gaps = 12/313 (3%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
LQ++R ++ + + P+ ++E +RFTD S ++ Q T +S+ D+ +A
Sbjct: 45 LQEVRQHATNWVRHSTIPTTREEEWRFTDLSSLRKVQFNVETGKFTSVQPDILPEAANSR 104
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGA 189
LV ++G +++LP G+ VG+L ++ I KRVS ++++ + ++F ++N G
Sbjct: 105 LVFVNGVYAPELSAIADLPPGIVVGNLTELTVDIQKRVSQYLAQAEGAQEVFTALNTAGL 164
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE--- 246
D V+ V VE I+L +++V G + IS PR +V+ E G V ++EE
Sbjct: 165 TDAAVVLVDKNVAVETLIHLVFMTVAG-----ETATISQPRCLVVAESGSSVTLVEEYRN 219
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 306
F E Y N+V E+ + + +V H+ + +S A HI TAV Q S Y ++
Sbjct: 220 FSSTEKEGVYLTNAVTEIWLAENAQVSHTRVVRESAEAFHIGKTAVTQARDSRYSSHAIT 279
Query: 307 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 366
GGKLSRHN+ + Q G TET L+ ++ Q D HS + L+HP G +QLHKCIV
Sbjct: 280 LGGKLSRHNLEILQTGEQTETTLNGLTMIWERQLGDTHSAIALNHPYGVSQQLHKCIVGD 339
Query: 367 SLGQAVFDGNVKV 379
AVF+G V V
Sbjct: 340 R-AHAVFNGKVFV 351
>gi|428304611|ref|YP_007141436.1| iron-regulated ABC transporter permease SufD [Crinalium epipsammum
PCC 9333]
gi|428246146|gb|AFZ11926.1| Iron-regulated ABC transporter permease protein SufD [Crinalium
epipsammum PCC 9333]
Length = 437
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 173/331 (52%), Gaps = 27/331 (8%)
Query: 67 LPQPLP-----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD 121
L Q LP ++++RD ++ + P+ +DE +R TD S + Q ++ S++
Sbjct: 20 LGQELPATTSLIREIRDRATAVVQELAIPTTRDEEWRVTDLSGLLKVNFQAVSNQESAIS 79
Query: 122 VST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
+S +A LV ++G +++NLP G++VG+LL + + + +++ +
Sbjct: 80 LSDINSLILPEAAASRLVFVNGIYAPELSSVANLPAGLFVGNLLAAN---IPHLENYLGK 136
Query: 175 FQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
Q G ++F ++N D V+YVP VE PI+L ++SV G + IS PR +V
Sbjct: 137 QQGGQEVFTALNTASLTDAAVVYVPKNLLVETPIHLLFISVTG-----EAATISQPRCLV 191
Query: 234 LVEEGGEVGIIEEFVGK-----EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
+VE G V +IE+++ + NSV EV +G+ +V H +Q ++ A HI
Sbjct: 192 VVEAGSTVTLIEDYISYPVTSPQSPVTNLTNSVTEVWVGENAQVSHIRVQQENKEAFHIG 251
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 348
+A+ Q S Y VS GG+LSRHN+ V Q G TET L+ ++ Q D HS +
Sbjct: 252 KSAIAQARNSRYACHAVSFGGQLSRHNLEVFQTGEATETTLNGLTMIGGSQIGDTHSAIA 311
Query: 349 LDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
L+HP G QLHKC+V AVF+G V V
Sbjct: 312 LNHPYGITNQLHKCVVGDR-AHAVFNGKVFV 341
>gi|298490172|ref|YP_003720349.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
gi|298232090|gb|ADI63226.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
Length = 448
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 176/320 (55%), Gaps = 22/320 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVSTDA 126
LQ+LRDS+ + + + P+ ++E +RFTD S++K + + + ++LDV +
Sbjct: 37 LQQLRDSAVKWVRHSVIPNTRNEEWRFTDLSLLKEVEFNSVDIKTLEKFQETALDVEIFS 96
Query: 127 QFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSI 184
+ LV ++G + ++NLP G+ +G+L + D + + +++++ + D+F ++
Sbjct: 97 EVSHCLVFVNGIFAPNLSAITNLPPGLKIGNLDILPDAVAQ---EYLAQSEGTRDVFTTL 153
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N G D+ V++V V+NPIYL ++SV G + IS PR +V+ E +V +I
Sbjct: 154 NTAGLNDVAVVWVGKNVVVQNPIYLLFISVAG-----ESAIISQPRCLVVAESNSQVSLI 208
Query: 245 EEFVGKEG-----NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
EE+ + G ++ Y+ANSV E+ + + +V H+ + Q A HI TAV Q S
Sbjct: 209 EEYTNRRGAEKAEDEVYFANSVTEIWVNENAQVSHTRVVMQGEAAFHIGKTAVTQAQYSR 268
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 359
Y V+ GGK+SRHN+ + Q G TET L+ ++ Q D HS L L+HP G + L
Sbjct: 269 YSCNAVTVGGKISRHNLEILQTGEQTETTLNGLTVIAEKQLADTHSVLFLNHPHGVSKHL 328
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
HKCI+ VF+G + V
Sbjct: 329 HKCIIGDR-AHGVFNGKIFV 347
>gi|186684918|ref|YP_001868114.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
gi|186467370|gb|ACC83171.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
Length = 457
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 169/316 (53%), Gaps = 15/316 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ--IQPITRPSSSLDVSTDAQFPS 130
LQ+LR S++ + + P+ ++E +RFTD S ++ Q I+ + S D+ +A
Sbjct: 44 LQELRQSAANWVRHSIIPTTREEEWRFTDLSSLRKVQFNIETVNYASLEFDILPEAANSR 103
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGA 189
LV ++G +S+LP G+ V +L G+S + V F+++ + ++F ++N G
Sbjct: 104 LVFVNGVFAPELSAVSDLPSGIVVSNLAGLSVLEQEGVRQFLAQAEGAQEVFTALNTAGI 163
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D V++V VE PI+L ++SV G + IS PR +V+ E G EV ++EE+
Sbjct: 164 TDAAVVWVKKNVVVETPIHLVFISVVG-----ETATISQPRCLVVAESGSEVTLVEEYTN 218
Query: 250 KEGND------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
+ G + Y+ N+V EV +G +V H+ ++ + A HI TA+ Q S Y
Sbjct: 219 RRGAESAEKEGVYFTNAVTEVWVGDNAQVSHTRVEQEGAEAFHIGKTAIAQARDSRYTCH 278
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 363
++ G KLSRHN+ + Q G T+T L+ ++ Q D HS + L++P G QLHKCI
Sbjct: 279 AITLGAKLSRHNLEILQTGEQTQTTLNGLTIISGKQLSDTHSAIALNYPHGTSDQLHKCI 338
Query: 364 VAHSLGQAVFDGNVKV 379
V AVF+G V V
Sbjct: 339 VGDR-AHAVFNGKVFV 353
>gi|414078259|ref|YP_006997577.1| FeS assembly protein SufD [Anabaena sp. 90]
gi|413971675|gb|AFW95764.1| FeS assembly protein SufD [Anabaena sp. 90]
Length = 438
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 169/311 (54%), Gaps = 14/311 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
L++LRD +++ + + P+ ++E +RFTD S +K + +SL D+ +
Sbjct: 37 LKQLRDGAAKWVRHSVIPNTREEEWRFTDLSSLKQVDFKLGMFQKTSLGSDILPEVS-QR 95
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGA 189
LV ++G N NLP G+ VG+L +S I V +++++ + ++F ++N
Sbjct: 96 LVFVNGVYSPDLSNTENLPAGLIVGNLNVLSSEI---VGEYLAQAEGAKEVFTALNTAAL 152
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D+ V++V +E PI+L ++SV G + IS PRV+V+ E +V +IEE++
Sbjct: 153 NDVAVVWVGKNVVLETPIHLLFISVSG-----ESATISQPRVLVVAESNSQVTLIEEYIA 207
Query: 250 KEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
N+ Y+ NSV E+ + + +V H+ + + A H+ TAV Q S Y V+ G
Sbjct: 208 SSQNEGVYFTNSVTEIWVNENAQVSHNRIAREGAAAFHVGKTAVTQARYSRYSCNAVTVG 267
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 368
GK+SRHN+ + Q G TET L+ ++ +Q D HS L L+HP G +QLHKCI+
Sbjct: 268 GKISRHNLEILQTGEQTETTLNGLTVIADNQVADTHSALSLNHPHGVSKQLHKCIIGDR- 326
Query: 369 GQAVFDGNVKV 379
VF+G + V
Sbjct: 327 AHGVFNGKIFV 337
>gi|307152986|ref|YP_003888370.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
gi|306983214|gb|ADN15095.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
Length = 449
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 173/320 (54%), Gaps = 23/320 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ++R ++ T+ P++KDE +RFTD S ++ T + + D P
Sbjct: 39 LQQIRQQATATVGQLALPTKKDEEWRFTDISELQQQNFSAATPVNLTADSIKSFILPETA 98
Query: 131 ---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI-SEFQCGDLFWSING 186
LV ++GF NLS LP+GV VG+L + +++S ++ + + ++F ++N
Sbjct: 99 NSILVFVNGFYAPELSNLSALPEGVKVGNLASIP---TEKISVYLGKQNEQTEIFSALNT 155
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
G D+ V++ AG V++ I L +L+V+ + PI + PRV+V+ E+ + IIE
Sbjct: 156 AGLTDVAVVWTEAGVTVDSSIQLLFLTVK------TETPIFTQPRVLVVAEKHSSLQIIE 209
Query: 246 EF------VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
++ ++ Y+ NSV E+ + + +V HS +Q ++ + HI + + Q+ S
Sbjct: 210 DYRVITNSCSHLSDNTYFTNSVTEIWLEENAQVNHSRIQREAGKSFHIAKSTIAQKRDSN 269
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 359
Y + E++ GGKL RHN+ + Q G T+T L+ ++ Q D HS + L+HP G QL
Sbjct: 270 YTINEINFGGKLYRHNLEIFQQGEQTQTTLNGLTIIGDKQVSDTHSAVYLNHPYGTTNQL 329
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
HKCI+ HS A+F+G V V
Sbjct: 330 HKCIIDHS-AHAIFNGKVFV 348
>gi|254413288|ref|ZP_05027059.1| FeS assembly protein SufD [Coleofasciculus chthonoplastes PCC 7420]
gi|196179908|gb|EDX74901.1| FeS assembly protein SufD [Coleofasciculus chthonoplastes PCC 7420]
Length = 452
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 168/322 (52%), Gaps = 24/322 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT----RPSSSLDVS--TDAQF 128
+LRD ++ + P+R+DE +RFTD S + + Q + + LD++ T +
Sbjct: 38 QLRDQAAAIVEELAMPTRRDEEWRFTDLSPLLAVNFQGVEAFFEQFLQHLDLTSLTLPET 97
Query: 129 PS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSIN 185
P LV ++G ++ LP+GVYVG+L G+ + +R+ +++ + Q D+F ++N
Sbjct: 98 PDSRLVFVNGVYAPDLSSVRGLPEGVYVGNLAGLPNAYQERIPNYLGKQQAASDVFAALN 157
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGII 244
G D V+++P VE PI+L ++S + +P I PR +V+ E G V +I
Sbjct: 158 TSGLTDAAVVWIPKATIVETPIHLLFIST------TDDVPVICQPRCLVVAEPGSVVNLI 211
Query: 245 EEFVGK-EG------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
E + EG N Y+ N V E+ I +V H+ Q ++++ HI TAV Q
Sbjct: 212 EHYAANVEGCPDIPVNRPYFNNQVTEIWIEDDAQVIHTRNQREAIDGFHIGKTAVTQARN 271
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y +S G +LSRHN+ + Q G TET L ++ +Q D HS +LL+HP G
Sbjct: 272 SRYTCNAISLGARLSRHNLEIVQTGEATETTLKGLTMIGGEQVADTHSAVLLNHPHGMTN 331
Query: 358 QLHKCIVAHSLGQAVFDGNVKV 379
QLHKCI+ VF+G V V
Sbjct: 332 QLHKCII-DDRAHGVFNGKVFV 352
>gi|334120519|ref|ZP_08494599.1| FeS assembly protein SufD [Microcoleus vaginatus FGP-2]
gi|333456497|gb|EGK85129.1| FeS assembly protein SufD [Microcoleus vaginatus FGP-2]
Length = 454
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 174/335 (51%), Gaps = 38/335 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS----------LDV 122
LQ LR++++Q +LS+ +P+ +DE +RFTD S + QI P P S+ + V
Sbjct: 35 LQDLREAATQYVLSSSFPTVRDEEWRFTDLSSVL--QI-PFHIPQSNQSKVKLADIIMPV 91
Query: 123 STDAQFP-SLVLIDGF-------IQNSALNLSNLPDG-------VYVGSLLGVSDGIMKR 167
P LV ++GF +++S NLP Y G+L V + R
Sbjct: 92 KNRDDLPLRLVFVNGFYAPDLSTVESSVF--PNLPLAEPSKRIDFYAGNLSNVPEKYQGR 149
Query: 168 VSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+SD +S+ Q ++F ++N G D V++VPA ++ PI+L +L+ G + +
Sbjct: 150 ISDVLSKHRQQTEVFTALNTAGLADSAVVFVPANMSIDLPIHLLFLTAPGASP-----TM 204
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
S P +V+ E G V ++E++ GN + N+V +VV+G+ V H LQ + H
Sbjct: 205 SQPHCLVIAEPGSNVTLVEDY-ATIGNVAAFTNAVTDVVVGENATVNHVRLQREGGEVVH 263
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
I +A+ Q S Y +S GGK+SRHN+ V Q G TET L+ + +Q D HS
Sbjct: 264 IGTSAIEQSRNSRYTCHAISLGGKISRHNLEVFQRGEATETTLNGLTVAFGEQLSDTHSL 323
Query: 347 LLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ +HP G RQLHKCI+ + +AVF+G V V +
Sbjct: 324 IDFNHPHGTSRQLHKCIIGNK-ARAVFNGKVFVRK 357
>gi|332709645|ref|ZP_08429604.1| Iron-regulated ABC transporter permease protein SufD [Moorea
producens 3L]
gi|332351472|gb|EGJ31053.1| Iron-regulated ABC transporter permease protein SufD [Moorea
producens 3L]
Length = 449
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 171/318 (53%), Gaps = 18/318 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-MIKSSQIQPITRPSSSLDVST----DAQ 127
LQ+L + + P+ KDE +RFTD S +++ + + +S+LD+S +A
Sbjct: 32 LQELSNHARGIAQELAIPTTKDEEWRFTDLSPLLQETFEAALAVDTSTLDISPVVLPEAM 91
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSING 186
LV ++G +++ LP+GV+VG+L + R++D++ Q D+F +N
Sbjct: 92 NSRLVFVNGIYAPEQSSVAGLPEGVFVGNLAELPSEYQSRIADYLGNQQGVSDVFTLLNT 151
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIE 245
G D+ VI++P +V PI+L ++S+ G +P + PR +V+ E G ++ ++E
Sbjct: 152 AGLTDVAVIWLPRNTEVTAPIHLLFVSMADG------VPRLFQPRCLVVAEPGSQLSLVE 205
Query: 246 EF-VGKEGNDC---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
E+ G+E N Y NSV E+ +G+ +V H + +S A H+ +A+ Q S Y
Sbjct: 206 EYWQGQEANSAQGVYLTNSVTELWVGENARVTHIRVDGESNQAFHVGKSAIAQSRNSFYS 265
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 361
V+ GGKLSRH + V Q+G TET L+ + Q D HS ++L+HP G QL K
Sbjct: 266 CHGVAFGGKLSRHTLEVFQMGEGTETILNGLTAISEQQLADTHSAVMLNHPNGISNQLQK 325
Query: 362 CIVAHSLGQAVFDGNVKV 379
CI+ S AVF+G V V
Sbjct: 326 CIIDGS-AHAVFNGKVSV 342
>gi|121489809|emb|CAK18875.1| hypothetical protein [Phillyrea latifolia]
Length = 191
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 128/179 (71%), Gaps = 12/179 (6%)
Query: 18 PKLTP--KRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQK 75
PKLTP K R + K RV Q+ A SDP V+QLAE+LEDSL SSSS+ P P PLQK
Sbjct: 18 PKLTPGSKTRLRTGKARVFTQSPT-LAILSDPRVLQLAETLEDSLQSSSSA-PLP-PLQK 74
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS---TDAQFP-SL 131
LRD SSQ+LLSTPWPSRKDEPFRFTDTS IK+S I+PI+ PS S ++ +D P ++
Sbjct: 75 LRDISSQSLLSTPWPSRKDEPFRFTDTSFIKNSDIEPIS-PSKSQSLAPVLSDTLLPLNI 133
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGA 189
++DG++ +S LS LPDGV+VG L + S+ MKRVS+ + FQ GDLFW +NG+GA
Sbjct: 134 TILDGYVVDSLSQLSELPDGVFVGGLSSITSEATMKRVSECVPNFQ-GDLFWLLNGVGA 191
>gi|443318075|ref|ZP_21047358.1| FeS assembly protein SufD [Leptolyngbya sp. PCC 6406]
gi|442782319|gb|ELR92376.1| FeS assembly protein SufD [Leptolyngbya sp. PCC 6406]
Length = 451
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 159/334 (47%), Gaps = 16/334 (4%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-IT 114
L+ L ++ + +P+ LPL LR + +PS +DE +RFTD S + + QP T
Sbjct: 28 LQALLATAQAGVPESLPLTALRTQAIAIAQEQGFPSTRDEDWRFTDLSSLIAVPFQPPTT 87
Query: 115 RPSSSLDVSTDAQFPS----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSD 170
P+ Q P LV I+G + + LP+GV VGSL + + + D
Sbjct: 88 MPTVKATALAAVQLPEVSARLVFINGQFSAALSSTETLPNGVAVGSLAQLHNSPLGDQID 147
Query: 171 FISEFQCG--DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-S 227
G DLF ++N G D V++V V PI + YLS+ + PI S
Sbjct: 148 VRLGHAGGQQDLFSALNTAGFQDGAVVWVSQFQTVAAPIQILYLSI------PQDQPIVS 201
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
PR +V+ E + +IE+F G D + SV EV + +V H LQ + HI
Sbjct: 202 YPRCLVVAEAASTLTLIEDFYGTGTGD-HLNTSVTEVWVDDTAQVNHVRLQREGSGTFHI 260
Query: 288 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 347
TAV Q S Y +S G +LSRHN+ V Q GP T TEL + Q D HS L
Sbjct: 261 GKTAVSQGRDSRYVTTAISLGARLSRHNLEVTQRGPQTHTELHGLSAIADTQLADTHSLL 320
Query: 348 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L HP G Q HKCI+ AVF+G V+V+R
Sbjct: 321 ALTHPHGTAEQRHKCII-DGRAHAVFNGKVEVSR 353
>gi|172035921|ref|YP_001802422.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
gi|354556032|ref|ZP_08975330.1| FeS assembly protein SufD [Cyanothece sp. ATCC 51472]
gi|171697375|gb|ACB50356.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
gi|353552031|gb|EHC21429.1| FeS assembly protein SufD [Cyanothece sp. ATCC 51472]
Length = 449
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 171/321 (53%), Gaps = 21/321 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
+Q LR ++ + PS+KDE +RFTD S + ++++ + +T+ + +AQ
Sbjct: 34 MQTLRKNAVSQVQELTLPSKKDEEWRFTDLSELYQLEFQTAKTETVTQSIIDNFILPEAQ 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G + N+S LP+ +YVG+L + D +++D++ + Q G D F ++N
Sbjct: 94 QSYLVFVNGEYSSELSNVSELPEDIYVGNLSDLPDPKNNKIADYLGK-QEGEKDAFTALN 152
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
G D+ VI+V VE PI L +L+V GN + + PR +V+ E G + +E
Sbjct: 153 TAGFKDVAVIWVNKNIVVETPIQLLFLTV--GN---ETPSLIQPRTLVIAETGSSLSFVE 207
Query: 246 EFV-------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+ E N Y+ NSV E+ + ++ HS +Q + ++ HI +A+ Q S
Sbjct: 208 YYATVTESCSDDEKNQPYFTNSVTEIWLDNNAQINHSRIQRELGDSFHIGKSAISQNQDS 267
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
Y EV+ G KLSRH + + Q G TET L+ ++ +Q D H+ + L+HP G Q
Sbjct: 268 HYTCNEVNLGAKLSRHTLQMWQQGTQTETHLNGLTMIDHEQLADTHTAVCLNHPYGITHQ 327
Query: 359 LHKCIVAHSLGQAVFDGNVKV 379
LHKCI+ + G+ VF+G + V
Sbjct: 328 LHKCIIDGN-GRGVFNGKIFV 347
>gi|428312510|ref|YP_007123487.1| iron-regulated ABC transporter permease SufD [Microcoleus sp. PCC
7113]
gi|428254122|gb|AFZ20081.1| Iron-regulated ABC transporter permease protein SufD [Microcoleus
sp. PCC 7113]
Length = 462
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 175/318 (55%), Gaps = 18/318 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSLDVSTDAQFPS- 130
L++LRD +++ + + P+++DE +RFTD S + Q P ++ + V+TD P
Sbjct: 52 LKQLRDRAARWVKTLSLPAKRDEDWRFTDLSPLLQVNFQTPESQAEITESVATDFALPEA 111
Query: 131 ---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G +++LP+G+ V +L + +V +++++ Q G ++F ++N
Sbjct: 112 SIRLVFVNGVYAPHLSAVTDLPEGLVVSNLAQLPVAYRSKVGNYLAQ-QPGSAEVFTALN 170
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D V++V +VE PI+L ++S SK +S PR +V+ E G + ++E
Sbjct: 171 TASLKDAAVVWVGKNQQVETPIHLLFISTV-----SKTPTVSLPRCLVVAESGSNLTLVE 225
Query: 246 EFVG-KEGNDC---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
E+ K GND Y+ N+V E+V+ + ++ H+ + +S A HI +A+ Q S Y
Sbjct: 226 EYRNYKCGNDVQKVYFTNAVTEIVLEENAQINHTRIDQESKGAFHIGKSAIAQSRYSRYI 285
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 361
++ G KLSRH++ V Q G TET L+ L+ +Q D HS ++L+HP G QLHK
Sbjct: 286 GNAITFGSKLSRHHLEVFQTGEGTETTLNGLALIGGEQVADTHSAIVLNHPNGTANQLHK 345
Query: 362 CIVAHSLGQAVFDGNVKV 379
CI+ QA+F+G V V
Sbjct: 346 CII-DDRAQAIFNGKVFV 362
>gi|428218175|ref|YP_007102640.1| iron-regulated ABC transporter permease SufD [Pseudanabaena sp. PCC
7367]
gi|427989957|gb|AFY70212.1| Iron-regulated ABC transporter permease protein SufD [Pseudanabaena
sp. PCC 7367]
Length = 484
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 26/331 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSL----------- 120
LQ +R + L+ P +K E +++TD ++++K S + + +P L
Sbjct: 56 LQSIRQEAQTLLVDQELPHKKQEEWKYTDLSAVLKRSYV--LRKPQECLLDALENPGFEK 113
Query: 121 ----DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS-----DGIMKRVSDF 171
+ +A LV ++G L +LP+GV VGSL + + + +R+++F
Sbjct: 114 LIAGQIVPEAARSLLVFVNGVFSPQLSGLIDLPEGVIVGSLAQLCADCLPEKVQQRLAEF 173
Query: 172 ISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
++E D F ++N D+ + YVP ++ PI Y + IS PR
Sbjct: 174 LAELTDADDFFANLNAACLSDVAIAYVPKNVVIDQPIQFVYAVTPRSAQTANISVISQPR 233
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
+V+ E G + ++E +VG E + Y +NSV E+++G+ V H+ +Q + A HI T
Sbjct: 234 CLVVAETGSSMTLVETYVG-EPDRSYLSNSVAEIMVGENAAVNHTKVQWEGHAACHISTT 292
Query: 291 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 350
A+ QE S Y +STG K+SRHN+ VQQ TET L+ + D+ D HS + +
Sbjct: 293 AIAQERDSRYTCNAISTGAKISRHNLQVQQWAGQTETHLNGLAYIDGDRLTDTHSAIAHN 352
Query: 351 HPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ G QLHKCIV +A+F+G ++V +
Sbjct: 353 YAHGSSNQLHKCIV-DDRARAIFNGKIQVRQ 382
>gi|427740191|ref|YP_007059735.1| iron-regulated ABC transporter permease SufD [Rivularia sp. PCC
7116]
gi|427375232|gb|AFY59188.1| Iron-regulated ABC transporter permease protein SufD [Rivularia sp.
PCC 7116]
Length = 450
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 167/317 (52%), Gaps = 19/317 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS--TDAQFPS 130
LQ+L+DS++ + + P++KDE +RFTD S + R S D + T
Sbjct: 44 LQELKDSAASRVRHSFLPTKKDEEWRFTDLSALFKIDFNVENRNFLSPDTTPFTAISENR 103
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMG 188
LV ++G ++ ++NLPDGV V +L + D + V +++ + Q GD +F ++N G
Sbjct: 104 LVFVNGIFKSELSAIANLPDGVVVSNLASLPDLDGEFVKEYLGQAQ-GDKEVFTALNTAG 162
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
DL +I++ VE PI+L +++ + IS PR +V+ + G EV ++EEF+
Sbjct: 163 INDLALIWLSRNVVVETPIHLVFIT-------AGDKTISQPRCLVVAKTGSEVTLVEEFI 215
Query: 249 ------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
K+ + Y N+V E+ + + V HS ++ L A HI TAV Q S Y
Sbjct: 216 HFGDVEKKQEKEVYLNNAVTEIWVDENAGVNHSRVERDGLEAFHIGKTAVTQARNSRYTC 275
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
++ GGKLSRHN+ + Q G T+T L+ ++ +Q D HS L L++P +QL K
Sbjct: 276 NVINLGGKLSRHNLEIFQTGEQTQTTLNGLTIISGNQVSDTHSALALNYPYSCSKQLQKN 335
Query: 363 IVAHSLGQAVFDGNVKV 379
I+A VF+G + V
Sbjct: 336 IIADK-AHGVFNGKIFV 351
>gi|170078418|ref|YP_001735056.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
gi|34765745|gb|AAQ82449.1| SufD [Synechococcus sp. PCC 7002]
gi|169886087|gb|ACA99800.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
Length = 452
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 168/324 (51%), Gaps = 20/324 (6%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLDVST- 124
Q Q +RD + + +PSR+DE +R TD S++K + Q P T ++ LDV
Sbjct: 35 QSAEFQAIRDQGLEKVRQGKFPSRRDEAWRVTDLSVLKHTTFQAAQPTTPTAADLDVFAL 94
Query: 125 -DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI-SEFQCGDLFW 182
+ LV ++G +S LPDGV+VG+ ++ ++ ++ + + D+F
Sbjct: 95 PETANSRLVFVNGHYAPDQSCVSGLPDGVFVGNFTALAADQKAAIAKYLGQQTEQLDVFA 154
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
++N G DL +++VP VE PI L ++ GN + + + R +V+ E G +
Sbjct: 155 ALNDAGLGDLAIVWVPKNTVVEQPIQLLFV----GNGADQPTAMQS-RCLVIAETGAQAN 209
Query: 243 IIEEFVGKEGNDC-------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
++E + G C Y+ N++ EV + ++ H +Q ++ A H+ TA+ Q
Sbjct: 210 VVE-YYGAIAQGCTDQDTHRYFNNALTEVWVQTNARLNHVRVQREAGGAIHLGNTAIAQA 268
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S Y+L EV+ G +LSRH + + Q GP TET L ++ ++Q D H+ + L HP G
Sbjct: 269 QDSHYQLTEVNFGARLSRHTLTLTQNGPQTETILKGLTMVGAEQLSDTHTAVYLQHPYGS 328
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKV 379
QLHKCI+ + ++VF+G + V
Sbjct: 329 VDQLHKCIIDDA-ARSVFNGQIHV 351
>gi|218441630|ref|YP_002379959.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
gi|218174358|gb|ACK73091.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
Length = 454
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 170/322 (52%), Gaps = 26/322 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLD--VSTDAQ 127
+Q+LR + T+ + P++KDE +RFTD S ++ Q P+ +S+D + +
Sbjct: 33 IQQLRHQAGMTVSQSSLPTKKDEEWRFTDISQLQQHHFQVATPVELTLNSIDSFILPETD 92
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++GF N+S LP GV +G+L +S ++++ ++ + Q G + F + N
Sbjct: 93 NSILVFVNGFYSPELSNISGLPQGVKIGNLATLSP---EKIAPYLGQ-QPGQTEFFTAFN 148
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGII 244
+G D+ VI+V A VE P+ L +L+VE + PI PRV+V+ E+ + ++
Sbjct: 149 TVGLTDVAVIWVDAEITVERPVELLFLTVE------PQTPIVIQPRVLVVAEKNSSLQLV 202
Query: 245 EEF-------VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
E + G G Y+ NSV E+ + + ++ H+ +Q +S + HI TA+ Q
Sbjct: 203 EYYNVLTENCSGSSGKSSYFTNSVTEIWLQENAQINHTRIQQESGKSFHIGKTAIAQARD 262
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y E+S G + RHN+ + Q G T+T L+ + Q D HS + L++P G
Sbjct: 263 SRYTCNEISIGSQFYRHNLEIFQQGEQTQTNLNGLIISADHQVADTHSAIYLNYPYGTTD 322
Query: 358 QLHKCIVAHSLGQAVFDGNVKV 379
QLHKCI+ S A+F+G V V
Sbjct: 323 QLHKCIIDDS-AHAIFNGKVFV 343
>gi|428301500|ref|YP_007139806.1| iron-regulated ABC transporter permease SufD [Calothrix sp. PCC
6303]
gi|428238044|gb|AFZ03834.1| Iron-regulated ABC transporter permease protein SufD [Calothrix sp.
PCC 6303]
Length = 451
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 164/310 (52%), Gaps = 11/310 (3%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS--TDAQFPS 130
L ++++ ++ + + P+ +DE +RFTD S +K + +S +++ + +
Sbjct: 52 LPEVKEKAANWVRHSTLPTTRDEEWRFTDLSALKQVNFNVASGSITSSNIAFLQECENSR 111
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGA 189
LV ++G +S LP+G+ V +L + ++ + ++ + ++F ++N G
Sbjct: 112 LVFVNGVYAAELSAVSGLPEGITVTNLSQLPAEYTEKAKIYFAQAEGAIEVFTALNTAGM 171
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D VI++ VE PI+L Y++ V IS PR +V+ E G +V ++EEFV
Sbjct: 172 LDAAVIWIGKNVAVETPIHLIYVTTGENPV------ISQPRCLVVAETGSQVTLVEEFV- 224
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
E D ++ N+V E+ +G+ V HS +Q +L HI TAV Q S Y ++ GG
Sbjct: 225 TENQDGHFVNAVTEIWVGENASVNHSRIQKDNLATFHIGKTAVTQAKYSRYTCNAIAFGG 284
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
K+SRHN+ + Q G TET L+ ++ +Q D+HS + L+HP G QL K IVA
Sbjct: 285 KVSRHNLEILQTGEQTETTLNGLVMVKGEQVADMHSAIALNHPHGISNQLQKNIVADK-A 343
Query: 370 QAVFDGNVKV 379
A+F+G V V
Sbjct: 344 HAIFNGKVFV 353
>gi|443476916|ref|ZP_21066797.1| Iron-regulated ABC transporter permease protein SufD [Pseudanabaena
biceps PCC 7429]
gi|443018046|gb|ELS32366.1| Iron-regulated ABC transporter permease protein SufD [Pseudanabaena
biceps PCC 7429]
Length = 467
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 166/313 (53%), Gaps = 17/313 (5%)
Query: 80 SSQTLLSTPWPSRKDEPFRFTDTSMIKS-SQIQPITRPSSSLDVST--------DAQFPS 130
+S L + +P+ KDE +++TD S + S + P TR S + D+ ++
Sbjct: 61 ASDRLFNLSFPTTKDEEWKYTDVSALGSLTFANPETRTSRNSDIEALITKHIAPESLGSR 120
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSINGMGA 189
LV ++G + +LSN+ G+ +G+L + D I+ ++ +++ + D F S+N
Sbjct: 121 LVFVNGRYRQDLSDLSNIVGGLEIGTLETLGDRILPKLRSHLAQHPEANDYFASLNTACM 180
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSV-EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D+ +I VP VENPI L + SV E G + I+ PR +V+ E + ++ FV
Sbjct: 181 EDVAIILVPKNLVVENPIQLIFGSVPEVG----QATLINQPRCLVIAESHSNLTFVQTFV 236
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
G E + Y+ N+V EV + +G +V H+ +Q Q A HI TA+ Q S Y+ +S G
Sbjct: 237 G-EDHQVYFTNAVTEVWLAEGAQVNHTKVQQQGNEAIHINTTAIAQARNSVYKNQSISFG 295
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 368
K+SR N+ V Q+ TET L+ + +Q D HS + ++P G +QLHKCI A
Sbjct: 296 AKISRQNLIVHQMAEQTETSLTGLAFIDDEQLADTHSCIAHNYPHGSSKQLHKCI-ADGR 354
Query: 369 GQAVFDGNVKVNR 381
A+F+G ++V +
Sbjct: 355 SHAIFNGKIQVAK 367
>gi|218245299|ref|YP_002370670.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|257058334|ref|YP_003136222.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
gi|218165777|gb|ACK64514.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|256588500|gb|ACU99386.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
Length = 455
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 26/309 (8%)
Query: 88 PWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--------DAQFPSLVLIDGFIQ 139
P+P+ E +RFTD S + + P RP S+ +S +A+ SL+ ++G
Sbjct: 56 PFPTTHHEEWRFTDLSELYQIRFDP--RPRSTTILSDTLAPFILPEAKLSSLIFVNGEFA 113
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVP 198
NL+ LPDGVYVG+L+G+S ++V +++++ D+F +N + +++V
Sbjct: 114 PELSNLAALPDGVYVGNLMGLSSEKREKVVNYLAKHDGAKDVFTLMNTADMYHIAIVWVD 173
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC--- 255
V+ PI+L +L+V S I PRV+V+ E G + ++E + G DC
Sbjct: 174 PNVTVDIPIFLLFLTVA-----SHIHNIIQPRVLVIAETGSSLQLVEHY-GAISEDCSDL 227
Query: 256 -----YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
Y+ N+V E+ + +V H+ +Q + ++ HI TA+ Q S Y E++ G K
Sbjct: 228 AHNKAYFTNTVTEIWVKDNAQVNHTRVQRELGDSFHIGKTAIAQSQDSRYTCTEINLGAK 287
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 370
LSRH + V Q G TET L+ ++ Q D HS + L+H G QLHKCI+ +
Sbjct: 288 LSRHTLEVFQHGKQTETYLNGLTMVGGKQVADTHSAVFLNHSYGMAHQLHKCIIDDE-AR 346
Query: 371 AVFDGNVKV 379
VF+G + V
Sbjct: 347 GVFNGKIFV 355
>gi|16331746|ref|NP_442474.1| hypothetical protein slr0076 [Synechocystis sp. PCC 6803]
gi|383323489|ref|YP_005384343.1| hypothetical protein SYNGTI_2581 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326658|ref|YP_005387512.1| hypothetical protein SYNPCCP_2580 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492542|ref|YP_005410219.1| hypothetical protein SYNPCCN_2580 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437810|ref|YP_005652535.1| hypothetical protein SYNGTS_2582 [Synechocystis sp. PCC 6803]
gi|451815898|ref|YP_007452350.1| hypothetical protein MYO_126070 [Synechocystis sp. PCC 6803]
gi|3024874|sp|Q55792.1|Y076_SYNY3 RecName: Full=UPF0051 protein slr0076
gi|1001707|dbj|BAA10544.1| slr0076 [Synechocystis sp. PCC 6803]
gi|339274843|dbj|BAK51330.1| hypothetical protein SYNGTS_2582 [Synechocystis sp. PCC 6803]
gi|359272809|dbj|BAL30328.1| hypothetical protein SYNGTI_2581 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275979|dbj|BAL33497.1| hypothetical protein SYNPCCN_2580 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359279149|dbj|BAL36666.1| hypothetical protein SYNPCCP_2580 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960620|dbj|BAM53860.1| hypothetical protein BEST7613_4929 [Bacillus subtilis BEST7613]
gi|451781867|gb|AGF52836.1| hypothetical protein MYO_126070 [Synechocystis sp. PCC 6803]
Length = 453
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 167/319 (52%), Gaps = 25/319 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF-------P 129
R ++ L S P ++DE ++FTD S +K+ I + SLDV+ F
Sbjct: 44 RQGAADLLGSLRLPHKRDEEWQFTDLSELKA--IDFVAAGKVSLDVAAAENFYLPEAHQS 101
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMG 188
LV I+GF N ++LP + S ++ +++++++ + G ++F ++N G
Sbjct: 102 RLVFINGFFTPELSNTNDLPSAITCQSWTNLAAHQREQLANYLGQKTDGNEVFSNLNTAG 161
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D V+++PA ++++PI+L +L+V VD + + PR++V+VE +V I E +
Sbjct: 162 MTDSAVVWIPANTELKSPIHLLFLTV----VDPTPIMVQ-PRLLVVVENNAQVTIAESY- 215
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G +C Y+ N V E+ +G+ +V H Q S ++ HI TA+ Q S Y
Sbjct: 216 GAISTNCTDRPQQQPYFNNIVSEIYLGENAQVTHIRNQRDSGDSFHIATTAIAQGKQSRY 275
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L++V+ G KLSRHN+ + Q T+TE + +L Q D HS + L+HP G QLH
Sbjct: 276 RLIDVNLGAKLSRHNLQMTQQEEATKTEFLALTILAGRQVSDTHSTIALNHPHGATNQLH 335
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV QAVF G V V
Sbjct: 336 KCIV-DEYAQAVFSGKVLV 353
>gi|427706857|ref|YP_007049234.1| iron-regulated ABC transporter permease SufD [Nostoc sp. PCC 7107]
gi|427359362|gb|AFY42084.1| Iron-regulated ABC transporter permease protein SufD [Nostoc sp.
PCC 7107]
Length = 453
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 175/324 (54%), Gaps = 21/324 (6%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV--S 123
S+ + LQ+LR ++ + + P+ ++E +RFTD S ++ + + +P +++ V
Sbjct: 37 SVTEADGLQELRQQAANWVRHSTIPTTREEEWRFTDLSELRGVEFRK-AQPVNNVAVLKV 95
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS-DGIMKRVSDFISEFQCG-DLF 181
T LV ++G + L+ NLPDG+ VG+L G++ +G R+ ++++ + ++F
Sbjct: 96 TSLTDNRLVFVNG-VYAPELSAVNLPDGIVVGNLAGLTVEG--DRIRKYLAQAEGALEVF 152
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N G D V++V V+ PI+L ++SV G + IS PR +V+ E G +V
Sbjct: 153 TALNTAGLTDAAVVWVGKNVVVDTPIHLLFISVAG-----ETATISQPRCLVVAETGSQV 207
Query: 242 GIIEEFV------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
++EEF G EG Y+ N+V EV +G+ V H+ ++ + A H+ TAV Q
Sbjct: 208 TLVEEFTNRRDTEGAEGK-SYFTNAVTEVWVGENAAVNHTRVELEGAEAFHVGKTAVNQA 266
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S Y S G KLSRHN+ + Q G TET L+ ++ Q D HS + L++P G
Sbjct: 267 RYSRYTCNAFSLGAKLSRHNLEILQTGEQTETTLNGLAMISGKQVADTHSAIALNYPYGK 326
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKV 379
QLHKCIV AVF+G V V
Sbjct: 327 SEQLHKCIVGDR-AHAVFNGKVFV 349
>gi|412991263|emb|CCO16108.1| FeS assembly protein SufD [Bathycoccus prasinos]
Length = 527
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 170/329 (51%), Gaps = 24/329 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD-----AQ 127
++++R S+S+ L + P+ +DE +RF D S I S+ + + S DV D A
Sbjct: 95 VERMRSSASKQLSESKTPTNRDESWRFFDVSEITSATL--VREDDSEADVEEDMKAFLAD 152
Query: 128 FPSLVLIDGFIQN------SALNLSNLPDGVYVGSLLG--VSDGIMKRVSDFISEFQCGD 179
P + F+ S+++ + +GV + + ++ I D E Q G
Sbjct: 153 VPEGAKVVAFVNGRFSEKWSSIDEDD-KNGVSISRTISGDIATAIGTYDEDEEVEGQ-GA 210
Query: 180 LFWSINGMGAPDLGVIYVPAGCK-VENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEE 237
+F IN A V + + VEN +Y+ + + +L +N RV +
Sbjct: 211 IFARINKSCARSDNVACITVKSENVENIVYIIHARRSSKDRKDGELATGANARVFIDALA 270
Query: 238 GGEVGIIEEFV-----GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
V ++E++ GK+ + YWAN V+E+ + + +V HS Q+ A H + T V
Sbjct: 271 KSSVSVVEKYATVGGSGKKHDSRYWANDVVEIHLAENARVFHSLSQDHGREAVHTRATYV 330
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
RQ +S YE+ EV+ G KL RH++ V+QLG T+T+L+ F+L S QTQDLHS ++LD
Sbjct: 331 RQNESSMYEINEVNVGAKLHRHDLRVKQLGKKTDTKLNCFNLAGSKQTQDLHSAIILDFE 390
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
G Q H+CIV+ S G+ VFDGNV+VN+
Sbjct: 391 EGTTDQRHRCIVSSSSGKGVFDGNVRVNK 419
>gi|425469710|ref|ZP_18848623.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389880400|emb|CCI38830.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 441
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 163/319 (51%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV VG+L ++ +++ + + + F ++N G
Sbjct: 93 HLVFVNGIYQPELSDISALPPGVSVGNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ V Q G TET L ++ QT D HS + L+HP G +QLH
Sbjct: 263 TLNEINLGAKLCRHNLDVLQKGAQTETNLYGLAMITGQQTADTHSAIYLNHPHGITKQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|443667505|ref|ZP_21133952.1| feS assembly protein SufD [Microcystis aeruginosa DIANCHI905]
gi|159027408|emb|CAO86892.1| sufD [Microcystis aeruginosa PCC 7806]
gi|443330996|gb|ELS45677.1| feS assembly protein SufD [Microcystis aeruginosa DIANCHI905]
Length = 441
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVST--DAQFP 129
+LR+S + P RKDE ++FTD S + + QP+T ++L V +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQPVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RLVFVNGIYQPELSDISALPSGVRVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHNLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|119493189|ref|ZP_01624064.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
gi|119452754|gb|EAW33931.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
Length = 446
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 170/347 (48%), Gaps = 43/347 (12%)
Query: 59 SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-------------MI 105
+L + + +PQ LQ LRD ++ L P++K+E +RFTD S +
Sbjct: 19 NLAKTQTIVPQNSHLQDLRDRAATELQDKAIPTQKEEDWRFTDLSGLLQVNFQVAKPMQL 78
Query: 106 KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNL--PDGVYVGSLLGVSDG 163
I P+T P +A+ LV +DG A +LS DG++ G+L +
Sbjct: 79 TPEDISPLTLP--------EAENSCLVFVDG---EYAPHLSTFSQTDGIFAGNLGNLPAS 127
Query: 164 IMKRVSDFISEFQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
R+ D++ + Q ++F ++N D+ +I+V VE P++L ++S D+
Sbjct: 128 FGDRIDDYLDKQQGNSEIFTALNTASLTDIAIIWVGKNQAVETPLHLLFISTAD---DTP 184
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC--------YWANSVLEVVIGKGGKVRH 274
++ S PR +V+ E G IE + E DC Y+ NSV E+ I + +V+H
Sbjct: 185 RM--SQPRALVVAETGSSCTFIEHYASLE--DCSGFSTHHPYFVNSVTEIWIEENAEVKH 240
Query: 275 SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHL 334
+ +Q + A HI TA+ Q S Y L +S G KLSRHN+ + Q G TET L+ L
Sbjct: 241 TRVQRDAPQAFHIGRTAISQARTSRYTLNTISLGAKLSRHNLDLYQAGEGTETTLNGLTL 300
Query: 335 LVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ +Q D HS +H G Q+HKCI+ + VF+G V V++
Sbjct: 301 IGEEQLADTHSATFFNHQHGIYNQVHKCIL-DDRARGVFNGRVVVSQ 346
>gi|440681297|ref|YP_007156092.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
cylindrica PCC 7122]
gi|428678416|gb|AFZ57182.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
cylindrica PCC 7122]
Length = 447
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 170/317 (53%), Gaps = 22/317 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ LRD ++ + + P+ ++E +RFTD S +K + SL+ D P
Sbjct: 42 LQGLRDVAANWVRHSVIPNTREEEWRFTDLSPLKQVKFNLGMFEEISLE---DYILPEVS 98
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV ++G + N NLP G+ VG+L +S ++++ ++++ + ++F ++N
Sbjct: 99 QRLVFVNGVYSPNLSNTENLPSGLMVGNLDVLSGEVLRK---YLAQAEGANEVFTALNTA 155
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
G D V++V VE+PI+L ++SV G + IS PRV+V+ E G +VG+IEE+
Sbjct: 156 GLCDAAVVWVGKNVVVESPIHLLFVSVSG-----ESATISQPRVLVVAECGSQVGLIEEY 210
Query: 248 VGK-----EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+ + Y+ N V E+ + + +V HS + + A H+ TAV Q +S Y
Sbjct: 211 TNRPDAENAEEEVYFTNGVTEIWVHENAQVSHSRVVWEGDAAFHVGKTAVTQARSSRYTC 270
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
V+ GGK+SRHN+ + Q G TET L+ ++ +Q D HS + L+HP G +QLHKC
Sbjct: 271 NAVTVGGKISRHNLEILQTGEQTETTLNGLTVVADNQLGDTHSAIALNHPHGISKQLHKC 330
Query: 363 IVAHSLGQAVFDGNVKV 379
I+ VF+G V V
Sbjct: 331 IIGDR-AHGVFNGKVFV 346
>gi|376001922|ref|ZP_09779776.1| FeS assembly protein SufD [Arthrospira sp. PCC 8005]
gi|375329833|emb|CCE15529.1| FeS assembly protein SufD [Arthrospira sp. PCC 8005]
Length = 458
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 162/324 (50%), Gaps = 22/324 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ +RD+++ + P+R+ E +RFTD S + QP T S D + P
Sbjct: 40 LQNIRDNAASWVKELAIPTRRHEDWRFTDLSALLELPFQPATAVELSRDEISPLILPEVK 99
Query: 131 ---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++GF L NLPDGV+VG+L + + ++ +++++ ++F ++N
Sbjct: 100 GTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNT 159
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
D V++V ++ PI+L ++S+ S P+ S PR +++ E G + +IE
Sbjct: 160 SSLADAAVVWVHQNQVIDTPIHLLFISL------SSSQPVTSQPRTLIVAEPGSKATVIE 213
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
+ C Y+ N+V E+ +G +++H+ LQ + ++ HI T V Q
Sbjct: 214 HYATANILGCSDRTQKTPYFTNTVTELWVGDNAELQHTRLQRELASSFHIGRTVVSQGRD 273
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y +S G KLSRHN + Q TET+L+ L+ Q D HS + L+HP G
Sbjct: 274 SRYTGNAISLGAKLSRHNFDIHQTAAGTETQLNGLTLVNGQQVADTHSAVFLNHPHGVIN 333
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
QLHK IV A+F+G + V R
Sbjct: 334 QLHKAIV-DDRAHAIFNGRIVVPR 356
>gi|425438288|ref|ZP_18818693.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676593|emb|CCH94429.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 441
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 CIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKNPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + QE S Y
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQERDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|425463003|ref|ZP_18842466.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389823782|emb|CCI27750.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 441
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + QE S Y
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEVNAEVIHTRVQRESGDGFHIGRTIIEQERDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|209527508|ref|ZP_03276011.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
gi|423062206|ref|ZP_17050996.1| FeS assembly protein SufD [Arthrospira platensis C1]
gi|209492057|gb|EDZ92409.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
gi|406716114|gb|EKD11265.1| FeS assembly protein SufD [Arthrospira platensis C1]
Length = 458
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 35/355 (9%)
Query: 48 FVIQLAESLEDSLPSSSSSLPQPLPL--------QKLRDSSSQTLLSTPWPSRKDEPFRF 99
++ QL + SLP +P PL Q +RD+++ + P+R+ E +RF
Sbjct: 12 YLNQLLNRVRGSLP-----IPASFPLERNIAEQLQNIRDNAASWVKELAIPTRRHEDWRF 66
Query: 100 TDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNLPDGVYV 154
TD S + QP T S D + P LV ++GF L NLPDGV+V
Sbjct: 67 TDLSALLELPFQPATAVELSRDEISPLILPEVKGTRLVFVNGFYSPQLSCLDNLPDGVFV 126
Query: 155 GSLLGVSDGIMKRVSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
G+L + + ++ +++++ ++F ++N D V++V ++ PI+L ++S
Sbjct: 127 GNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNTSSLADAAVVWVHQNQVIDTPIHLLFIS 186
Query: 214 VEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDC--------YWANSVLEV 264
+ S P+ S PR +++ E G + +IE + C Y+ N+V E+
Sbjct: 187 L------SSSQPVTSQPRTLIVAEPGSKATVIEHYATANILGCSDRTQKTPYFTNTVTEL 240
Query: 265 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 324
+G +++H+ LQ + ++ HI T V Q +S Y +S G KLSRHN + Q
Sbjct: 241 WVGDNAELQHTRLQRELASSFHIGRTVVSQGRSSRYTGNAISLGAKLSRHNFDIHQTAVG 300
Query: 325 TETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
TET+L+ L+ Q D HS + L+HP G QLHK IV A+F+G + V
Sbjct: 301 TETQLNGLTLVNGQQVADTHSAVFLNHPHGVINQLHKAIV-DDRAHAIFNGRIVV 354
>gi|425452572|ref|ZP_18832389.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765610|emb|CCI08566.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 441
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 HLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G +QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIAKQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|422303635|ref|ZP_16390986.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791391|emb|CCI12817.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 441
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D+ VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDVAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|390440154|ref|ZP_10228505.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389836438|emb|CCI32631.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 441
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 HLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|428772613|ref|YP_007164401.1| iron-regulated ABC transporter permease SufD [Cyanobacterium
stanieri PCC 7202]
gi|428686892|gb|AFZ46752.1| Iron-regulated ABC transporter permease protein SufD
[Cyanobacterium stanieri PCC 7202]
Length = 457
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 170/322 (52%), Gaps = 23/322 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVSTDAQFP 129
+++L+ + ++ ++ + P+ +DE +RFTD + ++ + T+ + S LD + P
Sbjct: 43 IEQLKQTFAKVVVKSNIPTNRDEAWRFTDLTALQKTDFHAPTKQNLSDSILDGFKLQEAP 102
Query: 130 S--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSING 186
+ LV ++GF + ++S LPDGVYVG+L G+ ++VS+F+ + ++F ++N
Sbjct: 103 NSRLVFVNGFYDENLSDVSALPDGVYVGNLAGLDGSKKEKVSNFLGQNHSDNEVFSALNT 162
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
G D V++V +V+ PI+L ++ V + LPI PR++++ E IIE
Sbjct: 163 AGINDAFVVWVDKNVEVDIPIHLLHI------VAKEDLPILVQPRILMVGEVNSRCQIIE 216
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
+ G C Y+ N V E+ + + + H +Q +S + HI +A+ Q
Sbjct: 217 -YYGATSVGCSDAVGGKPYFTNVVTEIHLQENASLNHCRIQRESGDGFHIAQSAIAQYRN 275
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y + E+S GGKL RHN+ + Q G T T L ++ Q D HS + L+HP G
Sbjct: 276 SSYTINEISLGGKLYRHNLDIIQKGEQTYTNLHGLTMVQGKQIADTHSHVSLNHPYGTVN 335
Query: 358 QLHKCIVAHSLGQAVFDGNVKV 379
QLHK I+ S G +F+G V V
Sbjct: 336 QLHKYILDDS-GHGIFNGRVDV 356
>gi|425456922|ref|ZP_18836628.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389801855|emb|CCI19029.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 441
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P +KDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGKKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D+ VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDVAVIHVAANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLYRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGISNQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|425446491|ref|ZP_18826494.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389733251|emb|CCI02948.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 441
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVST--DAQFP 129
+LR+S + P RKDE ++FTD S + + Q +T ++L V +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFCAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D+ VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDVAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGISNQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|425439775|ref|ZP_18820090.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719921|emb|CCH96312.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 441
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + + Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRVPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D+ VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDVAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTTDTHSAIYLNHPHGIANQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|440756054|ref|ZP_20935255.1| feS assembly protein SufD [Microcystis aeruginosa TAIHU98]
gi|440173276|gb|ELP52734.1| feS assembly protein SufD [Microcystis aeruginosa TAIHU98]
Length = 441
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAHELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|428779546|ref|YP_007171332.1| FeS assembly protein SufD [Dactylococcopsis salina PCC 8305]
gi|428693825|gb|AFZ49975.1| FeS assembly protein SufD [Dactylococcopsis salina PCC 8305]
Length = 447
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 172/338 (50%), Gaps = 23/338 (6%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L++ LE + S+ + LQK + ++ + + +P RK+E +RFTD S + Q Q
Sbjct: 22 LSQRLESQIAEDDSTFK--VWLQKRQQEAANWVAESKFPHRKEEEWRFTDLSPLLDYQFQ 79
Query: 112 PITRPSS------SLDVST--DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
RP+S S++ T + LV ++G + LP GV + SL +
Sbjct: 80 ---RPASIAPNQESIEPFTLPECSQTRLVFVNGRYAPQLSQVDQLPAGVTMTSLAELDVH 136
Query: 164 IMKRVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+V+D++++ + G+ LF ++N G D +++V +VE P++L +LSV +
Sbjct: 137 QQSQVTDYLTQQEGGEELFTALNTAGFEDTAIVWVAVNTEVETPLHLLFLSV------GE 190
Query: 223 KLP-ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ P PR++V+ E +V IE++VG Y+ N V EV + +V H LQ ++
Sbjct: 191 ETPQFIQPRLLVVAETSAKVSFIEQYVGL-TTAPYFCNPVTEVWLAPNAEVNHVRLQEEA 249
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
LN+ HI TAV Q S Y VS GG+LSRH+ V + G TET L L +Q
Sbjct: 250 LNSFHIGKTAVMQAQDSRYTCSPVSMGGRLSRHDFDVIKDGTQTETRLRGLTLGNGEQLL 309
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
D HS + HP QLHKCI+ + + VF+G + V
Sbjct: 310 DTHSAIAFRHPHSSAEQLHKCILDKA-ARGVFNGKMFV 346
>gi|434395013|ref|YP_007129960.1| Iron-regulated ABC transporter permease protein SufD [Gloeocapsa
sp. PCC 7428]
gi|428266854|gb|AFZ32800.1| Iron-regulated ABC transporter permease protein SufD [Gloeocapsa
sp. PCC 7428]
Length = 468
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 163/326 (50%), Gaps = 27/326 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ--PITRPSSSLDVST---DAQ 127
L+ +RD ++ + + +P+ +DE +RFTD S +K + Q P+ P + +A
Sbjct: 54 LEAIRDRATAIVHQSKFPTTRDEEWRFTDVSPLKQVKFQAAPLVVPDLAALKPLLLPEAD 113
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSING 186
LV ++G I L+ L DGV +L + R+ +++++ ++F ++N
Sbjct: 114 RSRLVFVNG-IYAPELSAVVLSDGVVASNLDRLPPAYRSRLENYLAQIPGTEEVFTALNT 172
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
D+ V+++P VE PI+L ++S + PI + PR +V+ E G + +IE
Sbjct: 173 AAIADVAVVWIPKNVVVETPIHLLFVST------ASVAPIVTQPRCLVVAESGSSITLIE 226
Query: 246 EFV------------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
++ + G Y+ N+V E+ + + +V H+ ++ S A HI TA+
Sbjct: 227 DYFNQITNLEAEESEAEVGEPIYFTNAVTEIWLEENAQVNHTRIERDSPEAFHIGKTAIA 286
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
Q S Y ++ G KLSRHN+ + Q G T+T L+ + +Q D HS L L+HP
Sbjct: 287 QARDSRYTCNAINLGAKLSRHNLDIFQTGEQTQTTLNGLTKIAGNQVADTHSNLALNHPY 346
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKV 379
G QLHKCIV AVF+G + V
Sbjct: 347 GTSHQLHKCIVGDR-AHAVFNGKIFV 371
>gi|126660041|ref|ZP_01731162.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
gi|126618638|gb|EAZ89386.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
Length = 449
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 169/322 (52%), Gaps = 23/322 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
+Q LR ++ + PS+KDE +RFTD S + ++++ + +T+ + +AQ
Sbjct: 34 VQTLRKNAVSQVQELTLPSKKDEEWRFTDLSELYQLNFQTAKTETVTQTIIDNFILPEAQ 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G + N+S L + +Y+G+L + D ++++++ + Q G D F ++N
Sbjct: 94 QSYLVFVNGEYSSELSNVSGLSEDIYIGNLGHLPDAKNSKIANYLGK-QEGEKDAFTALN 152
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGII 244
G D VI+ +E PI L +L+V GN PI PR +V+ E G + +
Sbjct: 153 TAGFKDAAVIWANKNSVIETPIQLLFLTV--GN----DTPILIQPRTLVIAETGSSLSFV 206
Query: 245 EEFV-------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
E + E N Y+ NSV E+ + ++ HS +Q + ++ HI +A+ Q
Sbjct: 207 EYYATVTESCSDDEKNQPYFTNSVTEIWLENNAQINHSRIQRELGDSFHIGKSAISQNQD 266
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y EV+ G K+SRH + + Q G TE+ L+ ++ ++Q D H+ + L+HP G
Sbjct: 267 SHYTCNEVNLGAKVSRHTLQIWQKGTQTESHLNGLTMIDNEQLADTHTAVCLNHPHGVTH 326
Query: 358 QLHKCIVAHSLGQAVFDGNVKV 379
QLHKCI+ + G+ VF+G + V
Sbjct: 327 QLHKCIIDGN-GRGVFNGKIFV 347
>gi|166365048|ref|YP_001657321.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
gi|425465457|ref|ZP_18844766.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|166087421|dbj|BAG02129.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
gi|389832299|emb|CCI24210.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 441
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 25/319 (7%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + + + +A+
Sbjct: 33 ELRESGASKAHELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALATFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q S Y
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQGRDSRY 262
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L E++ G KL RHN+ + Q G TET L ++ QT D HS + L+HP G QLH
Sbjct: 263 TLNEINLGAKLCRHNLDILQKGEQTETNLHGLAMITGQQTTDTHSAIYLNHPHGIANQLH 322
Query: 361 KCIVAHSLGQAVFDGNVKV 379
KCIV S A+F+G V V
Sbjct: 323 KCIVDGS-AHAIFNGKVFV 340
>gi|428225672|ref|YP_007109769.1| iron-regulated ABC transporter permease SufD [Geitlerinema sp. PCC
7407]
gi|427985573|gb|AFY66717.1| Iron-regulated ABC transporter permease protein SufD [Geitlerinema
sp. PCC 7407]
Length = 445
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 160/313 (51%), Gaps = 14/313 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV-----STDAQ 127
LQ LRD + L +PSR+DE +RFTD S + + Q T + + ++A+
Sbjct: 42 LQGLRDQGAAFLKEQSFPSRRDEDWRFTDLSPLLAVPFQAATASRLTPEAIAPFAVSEAE 101
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSING 186
LVL++G ++ LP G +VGSL + + D++++ G+ F ++N
Sbjct: 102 QSRLVLVNGVYAPELSAIAGLPAGAFVGSLADLPAERQSALQDYLAKQHGGEERFTALNT 161
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
D+ V+++P +E PI+L ++ + + + +PR +V+ E G + ++E+
Sbjct: 162 SHFQDVAVVWLPHNAVIEAPIHLLLVAT------ASEAALISPRCLVVAETGSALTLVED 215
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 306
FV G+ +W N+V EV + +V H+ +Q +++ A HI TAV Q S Y +S
Sbjct: 216 FV-TVGDGPHWTNAVTEVWVQANAQVNHTRIQREAIAAFHIGKTAVSQGRDSRYTCNAIS 274
Query: 307 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 366
GG++SRH++ V Q G T L+ + Q D HS + P G QLHKCIV
Sbjct: 275 LGGQISRHHLEVLQQGEQTHLALNGLTVASGTQLADTHSLIQYTQPYGASDQLHKCIVGD 334
Query: 367 SLGQAVFDGNVKV 379
+AVF+G + V
Sbjct: 335 R-ARAVFNGRISV 346
>gi|411119135|ref|ZP_11391515.1| Iron-regulated ABC transporter permease protein SufD
[Oscillatoriales cyanobacterium JSC-12]
gi|410710998|gb|EKQ68505.1| Iron-regulated ABC transporter permease protein SufD
[Oscillatoriales cyanobacterium JSC-12]
Length = 450
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 160/317 (50%), Gaps = 17/317 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
LQ++RD ++ + PS ++E +RFTD S + +++ + R SS++ + A F
Sbjct: 42 LQEVRDRAASRVQELAIPSTREEEWRFTDLSPLLKVELKSVARKSSAISQAEIASFILPE 101
Query: 129 --PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFIS-EFQCGDLFW 182
LV +DG NLP + VG+L + + R+ D+++ + G+ F
Sbjct: 102 SSTCLVFVDGTFLPELSTTQNLPTNMVVGNLATAIQQESSLQNRILDYLARQPGSGETFT 161
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
++N D+ VIYVP V++PI++ ++S D ++ ++ PR +V+ E +
Sbjct: 162 ALNTASMTDVAVIYVPQKQIVDSPIHVLFVS----TADQPQV-MTTPRCLVIAESNSSLT 216
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+IE+++ + Y+ NSV EV + V H+ +Q S A HI TAV Q + Y
Sbjct: 217 LIEDYISLNAS-VYFTNSVTEVWVEANAHVNHTRIQRDSQTAFHIGKTAVSQARDAHYTC 275
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
+S G LSRH++ V Q G T T L+ ++ +Q D HS + P G Q+HKC
Sbjct: 276 NAISLGAALSRHHLEVYQTGEQTYTMLNGLTMIADNQVADTHSLISYTKPYGTSNQIHKC 335
Query: 363 IVAHSLGQAVFDGNVKV 379
IV AVF+G + V
Sbjct: 336 IVDDQ-AHAVFNGKIFV 351
>gi|427722164|ref|YP_007069441.1| iron-regulated ABC transporter permease SufD [Leptolyngbya sp. PCC
7376]
gi|427353884|gb|AFY36607.1| Iron-regulated ABC transporter permease protein SufD [Leptolyngbya
sp. PCC 7376]
Length = 450
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 181/356 (50%), Gaps = 32/356 (8%)
Query: 42 ATFSDPF---------VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSR 92
A+F +P ++QLAE+ + S+ L++LR + + +P++
Sbjct: 9 ASFDNPITMLDLSLSPLLQLAETNKTVFNQGSTGW-----LKELRTQGAYKVSHAIFPTK 63
Query: 93 KDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVSTD---AQFPSLVLIDGFIQNSALNLSNL 148
+DE +R TD S +++++ + T + D++T+ LV ++G N L
Sbjct: 64 RDEDWRVTDISTLRATRFLNAKTYELDAADIATELVGEAIHQLVFVNGKFSAELSNTEEL 123
Query: 149 PDGVYVGSLLGVSDGIMKRVSDFIS-EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
P+G++VG+L +S + + +I + D+F ++N G D+ +I+ VE PI
Sbjct: 124 PEGLFVGNLAQLSADQAEELIKYIGVHSRERDVFAALNNAGFHDVAIIWAEKNVVVEAPI 183
Query: 208 YLKYLSVEGGN---VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK-EGNDCYWANSVLE 263
+ +++ G + ++ L I++P +IE++VG+ G Y+ N++ E
Sbjct: 184 QVLFVNQAAGRPTAMQTRCLAIASP--------SSSFSLIEQYVGRGSGEQTYFNNALTE 235
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 323
+ + + +++H +Q + NA HI T V Q S Y + EV+ GGKLSRH++ + Q G
Sbjct: 236 IFVQENAEIKHVRVQQEIPNATHISNTIVGQSQHSRYSITEVNLGGKLSRHSLTIHQEGV 295
Query: 324 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
TET L +L +Q D HS + L+ P G QLHKCIV S ++VF+G V V
Sbjct: 296 QTETNLKGLAILDGEQVCDTHSDVQLNFPHGTVDQLHKCIVDDS-ARSVFNGRVCV 350
>gi|428204624|ref|YP_007083213.1| FeS assembly protein SufD [Pleurocapsa sp. PCC 7327]
gi|427982056|gb|AFY79656.1| FeS assembly protein SufD [Pleurocapsa sp. PCC 7327]
Length = 449
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 165/314 (52%), Gaps = 14/314 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---MIKSSQIQPITRPSSSLDVST--DAQ 127
+++LR + +L + PS++DE +RFTD S I + T + L+ T +A+
Sbjct: 42 IEELRRQAVSQVLESRIPSKRDEEWRFTDLSDLLQISFQVAEKATVAAGDLERLTLPEAK 101
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSING 186
+V ++GF ++S LP+ VYVG+L+ + D ++ +++ + ++F ++N
Sbjct: 102 QSRIVFVNGFYSPELSDVSGLPESVYVGNLVDLPDAQNDKIVKYLARQEDATEIFTALNT 161
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D+ VI+ VE PI + +LSV G + + PR++V+ E G + ++E
Sbjct: 162 SGLIDVAVIWANPNVIVETPIQVLFLSVSGSSPSFSQ-----PRLLVVAETGSSLELVE- 215
Query: 247 FVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
F G G N Y+ N+V E+ + +VRH+ +Q +S HI A+ Q S Y E+
Sbjct: 216 FYGAVGKNTPYFTNAVTEIWVQDNAQVRHNRIQQESATGFHIAKNAIAQARDSRYTCNEI 275
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 365
+ GGKL R+N+ + Q G T T L+ + +Q D HS + L P G QLHKCI+
Sbjct: 276 NLGGKLYRNNLDIFQTGEQTTTHLNGLVAISGEQVSDTHSAIFLTKPHGTTDQLHKCIID 335
Query: 366 HSLGQAVFDGNVKV 379
S AVF+G V V
Sbjct: 336 GS-AHAVFNGKVFV 348
>gi|434407798|ref|YP_007150683.1| Iron-regulated ABC transporter permease protein SufD
[Cylindrospermum stagnale PCC 7417]
gi|428262053|gb|AFZ28003.1| Iron-regulated ABC transporter permease protein SufD
[Cylindrospermum stagnale PCC 7417]
Length = 456
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 167/316 (52%), Gaps = 17/316 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
LQ+LRD ++ + + P+ ++E +RFTD S ++ Q + SL ++ +A
Sbjct: 45 LQELRDGAANWVRHSTIPTTREEEWRFTDLSELRKVQFNLGRLETISLQPNILPEAANSR 104
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGA 189
LV ++G +++LP G+ V +L + + + V F+++ + ++F ++N G
Sbjct: 105 LVFVNGVYAPELSAVADLPRGIVVSNLALLDN--YQVVQPFLAQSEGAREVFTALNTAGL 162
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D V+ V VE PI+L ++SV G + S PR +V+ E G +V ++EEF
Sbjct: 163 TDAAVVLVGKNVVVETPIHLLFVSVVG-----ETPTFSQPRCLVVAESGSQVTLVEEFTN 217
Query: 250 KEG------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
++ Y+ N+V E+ + + +V H+ ++ + A H+ TAV Q S Y
Sbjct: 218 RQDAKSAKEEGVYFTNAVTEIWLAENAEVSHTRVEMEGAGAIHVGKTAVTQARDSRYTCY 277
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 363
++ GGKL+RHN+ + Q G T+T L+ ++ S Q D HS + L++P G +QLHKCI
Sbjct: 278 AIAFGGKLTRHNLEILQAGEQTQTSLNGLTMIGSKQVADTHSAIALNYPHGSSKQLHKCI 337
Query: 364 VAHSLGQAVFDGNVKV 379
V AVF+G V V
Sbjct: 338 VGDR-AHAVFNGKVFV 352
>gi|300863813|ref|ZP_07108738.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
gi|300338161|emb|CBN53884.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
Length = 446
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 23/322 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-------MIKSSQIQPITRPSSSLDVSTD 125
L+ LRD +++ +L+ +P+ KDE +RFT+ S + ++ I +L VS+
Sbjct: 34 LKDLRDIATEYVLAAAFPTTKDEEWRFTNLSPLLEIPFQVAENKQLDIGLSDITLPVSSK 93
Query: 126 AQFP-SLVLIDGFI--QNSALNLSNLPD---GVYVGSLLGVSDGIMKRVSDFISEFQC-G 178
P LV ++G+ Q S++ S LP Y G+L R+ + +S+ Q
Sbjct: 94 EDLPLRLVFVNGYYAPQLSSVQSSLLPTLALEFYAGNLSNAPGPYHARIREHLSKHQQQS 153
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEE 237
++F ++N G D V++VP ++ PI+L + ++ G P+ P +V+ E
Sbjct: 154 EVFSALNIAGLVDAAVVFVPQDKAIDTPIHLLFFTIAGAT------PVMCQPHCLVIAEP 207
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
G + ++E++ GN + N++ E+V+G+ V H +Q + +A HI + + Q
Sbjct: 208 GSSITLVEDY-ATIGNVSTFTNAMTEIVVGENATVNHLRIQREGGDAFHIGKSTISQSRH 266
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y +S G K+SRHN+ V Q G TET L+ L+ +Q D HS + ++P G R
Sbjct: 267 SRYTCHAISLGAKISRHNLEVTQAGEGTETTLNGLTLIGGEQLADTHSVIGFNYPHGMSR 326
Query: 358 QLHKCIVAHSLGQAVFDGNVKV 379
QLHKCIV AVF+G V V
Sbjct: 327 QLHKCIVDDK-AHAVFNGKVFV 347
>gi|291567130|dbj|BAI89402.1| FeS assembly protein SufD [Arthrospira platensis NIES-39]
Length = 458
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 164/322 (50%), Gaps = 22/322 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
LQ +RD+++ + P+R+ E +RFTD S + +++ ++R S + + +
Sbjct: 40 LQNIRDNAASWVKELAIPTRRHEDWRFTDLSALLELPFQAATAVELSREEISPLILPEVK 99
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++GF L NLPDGV+VG+L + + ++ +++++ ++F ++N
Sbjct: 100 GTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNT 159
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
D V++V ++ PI+L ++S+ S P+ S PR++++ E G + +IE
Sbjct: 160 SSLADAAVVWVHQNQVIDTPIHLLFISL------SSSQPVTSQPRILIVAEPGSKATVIE 213
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
+ C Y+ N+V E+ +G +++H+ LQ + ++ HI T V Q
Sbjct: 214 HYATANILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQRELASSFHIGRTVVSQGRD 273
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y +S G KLSRHN + Q TET+L+ L+ Q D HS + L+HP G
Sbjct: 274 SRYTGNAISLGAKLSRHNFDIHQTAAGTETQLNGLTLVNGQQVADTHSAVFLNHPHGVIN 333
Query: 358 QLHKCIVAHSLGQAVFDGNVKV 379
QLHK IV +F+G + V
Sbjct: 334 QLHKAIV-DDRAHGIFNGRIVV 354
>gi|428776745|ref|YP_007168532.1| iron-regulated ABC transporter permease SufD [Halothece sp. PCC
7418]
gi|428691024|gb|AFZ44318.1| Iron-regulated ABC transporter permease protein SufD [Halothece sp.
PCC 7418]
Length = 450
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 14/315 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
LQK + ++ + + +P RKDE +RFTD S + + SQ + S+S +A
Sbjct: 41 LQKRQQEAANWVAESRFPHRKDEEWRFTDLSPLLDHPFQGSQAVAVNPESASQFFIPEAS 100
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSING 186
LV ++G L LP GV + SL + +V+D++++ + G+ LF ++N
Sbjct: 101 SARLVFVNGRFSPELSQLDQLPSGVTLTSLGNLDVHQQSQVTDYLTQQEGGEELFTALNT 160
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D G+++V A +VE PI + +L+V GN S+ + PR++V+ + +V +IE+
Sbjct: 161 AGFEDSGIVWVAANTEVETPIQVLFLAV--GNDTSQFM---QPRLLVVADTSAKVNLIEQ 215
Query: 247 F--VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
+ + E Y N V E+ + +V H LQ+++ N+ HI TAV Q S Y
Sbjct: 216 YASLSSENAAPYLCNPVSEIWLAGNAEVNHIRLQDEAFNSFHIAKTAVTQAQDSRYAGYP 275
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 364
+S GG++SRH+ V Q G T+L L Q D HS + HP QLHKCI+
Sbjct: 276 ISLGGQISRHDFDVFQTGTQVHTKLHGLTLGNGQQLLDTHSAIAFRHPHSSADQLHKCIL 335
Query: 365 AHSLGQAVFDGNVKV 379
S + VF+G + V
Sbjct: 336 DDS-ARGVFNGKMFV 349
>gi|409990930|ref|ZP_11274242.1| FeS assembly protein SufD [Arthrospira platensis str. Paraca]
gi|409938204|gb|EKN79556.1| FeS assembly protein SufD [Arthrospira platensis str. Paraca]
Length = 458
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 164/322 (50%), Gaps = 22/322 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
LQ +RD+++ + P+R+ E +RFTD S + +++ ++R S + + +
Sbjct: 40 LQNIRDNAASWVKELAIPTRRHEDWRFTDLSALLELPFQAATAVELSREEISPLILPEVK 99
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++GF L NLPDGV+VG+L + + ++ +++++ ++F ++N
Sbjct: 100 GTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNT 159
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
D V++V ++ PI+L ++S+ S P+ S PR++++ E G + +IE
Sbjct: 160 SSLADAAVVWVHQNQVIDTPIHLLFISL------SSSQPVTSQPRLLIVAEPGSKATVIE 213
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
+ C Y+ N+V E+ +G +++H+ LQ + ++ HI T V Q
Sbjct: 214 HYATANILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQRELASSFHIGRTVVSQGRD 273
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y +S G KLSRHN + Q TET+L+ L+ Q D HS + L+HP G
Sbjct: 274 SRYTGNAISLGAKLSRHNFDIHQTAAGTETQLNGLTLVNGQQVADTHSAVFLNHPHGVIN 333
Query: 358 QLHKCIVAHSLGQAVFDGNVKV 379
QLHK IV +F+G + V
Sbjct: 334 QLHKAIV-DDRAHGIFNGRIVV 354
>gi|443323166|ref|ZP_21052175.1| FeS assembly protein SufD [Gloeocapsa sp. PCC 73106]
gi|442787076|gb|ELR96800.1| FeS assembly protein SufD [Gloeocapsa sp. PCC 73106]
Length = 440
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 25/322 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLDVST--DAQ 127
+ +L + + L + P + DE +RFTD S +K ++ P+ +L+ T +AQ
Sbjct: 29 ITELSNQALTALANQSLPQKSDEDWRFTDLSELKKLSLRLASPVEVTKQALEQFTLPEAQ 88
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS-EFQCGDLFWSING 186
+V ++G + + S LP G+Y+G+L G+ + + +++S ++Q D+F +N
Sbjct: 89 HSRIVFVNGVYVSELSDTSGLPPGIYLGNLAGLEEAKKPELIEYLSRDYQ--DVFSLLNT 146
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
G D+ + +V V PI+L YL+V + PI PR +V+ ++ ++ I+E
Sbjct: 147 GGLKDIAIAWVEPDVVVTTPIHLLYLTVPESD------PILVQPRTLVVAQKNSQLEIVE 200
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
+ G DC Y N+V ++V+ + +++HS +Q +S + I T V Q+
Sbjct: 201 -YYGAITQDCSDQPHNLPYCNNAVTDIVLHENAQLKHSRVQRESGDGLSIANTCVEQDQD 259
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y L E++ G KL RHN+ V+Q G T T L L+ Q D HS + L HP G
Sbjct: 260 SSYTLWEINLGAKLFRHNLKVKQTGAQTTTNLQGLILVGGKQVTDTHSTVALAHPHGVVN 319
Query: 358 QLHKCIVAHSLGQAVFDGNVKV 379
Q HKCIV Q VF+G + V
Sbjct: 320 QNHKCIV-DGQAQVVFNGKIIV 340
>gi|428771190|ref|YP_007162980.1| iron-regulated ABC transporter permease SufD [Cyanobacterium
aponinum PCC 10605]
gi|428685469|gb|AFZ54936.1| Iron-regulated ABC transporter permease protein SufD
[Cyanobacterium aponinum PCC 10605]
Length = 455
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 169/334 (50%), Gaps = 30/334 (8%)
Query: 69 QPLPL--------QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS 117
QPL L Q++R ++ ++ P+ KDE +RFTD S + + QP +
Sbjct: 27 QPLHLEGKLQTIVQEIRRKAANKVVKLNLPTTKDESWRFTDLSELYKQDLVYAQPQDLEN 86
Query: 118 SSLD--VSTDAQFPSLVLIDGFIQNSALNLSNL-PDGVYVGSLLGVSDGIMKRVSDFISE 174
+L + +A LV ++G+ Q + + S L + +YVG+L + D ++++ ++++
Sbjct: 87 QTLQEFILKEASNSRLVFVNGYYQANLSDTSGLNSEQIYVGNLTNLDDDKQEKIAQYLAK 146
Query: 175 FQ-CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+ ++F ++N D V++V A +++ PI+L +LSV+ K PR++V
Sbjct: 147 NEPENEVFTALNSTSLNDAFVVWVKANQEIKTPIHLLHLSVK-----EKTGSWHQPRILV 201
Query: 234 LVEEGGEVGIIEEFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
+ E + IE + G C Y+ N+V E+ + +V H+ +Q +S +
Sbjct: 202 VAEANSVLEFIE-YYGATSFGCSDSARQQYYFTNAVTEIHLLDNAQVNHNRIQRESGDGF 260
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
HI T V Q S Y + E+S GGKL RHN+ V Q G TET L +L Q D HS
Sbjct: 261 HIAQTMVNQAKNSRYTINEISLGGKLYRHNLQVNQEGEQTETYLHGLTMLQGKQLGDTHS 320
Query: 346 RLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ L+HP G QLHK I+ + G VF+G V V
Sbjct: 321 EVNLNHPYGTVNQLHKYILDDA-GHGVFNGRVYV 353
>gi|354567898|ref|ZP_08987065.1| FeS assembly protein SufD [Fischerella sp. JSC-11]
gi|353541572|gb|EHC11039.1| FeS assembly protein SufD [Fischerella sp. JSC-11]
Length = 446
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 164/314 (52%), Gaps = 17/314 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
LQ++RD ++ + + P+ +DE +RFTD S ++ + T + SL D+ +A
Sbjct: 45 LQQVRDRAANWVRHSVLPTTRDEEWRFTDLSALRQVKFNVETLHAKSLQPDILPEAANSR 104
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD-GIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G ++ LP GV V +L S G+ K ++ D+F ++N G
Sbjct: 105 LVFVNGIYVPELSVVAGLPKGVVVSNLDAASQLGVQKYLARAEGAL---DVFTALNTAGI 161
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV- 248
D+ V++VP VE PI+L +++ + IS PR +V+ E G +V ++EE+
Sbjct: 162 NDVAVVWVPKDVVVETPIHLVFIAA------GDQPFISQPRCLVVAESGSQVSLVEEYRN 215
Query: 249 ---GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
K + Y +N+V E+ + +V H+ ++ S A HI TAV Q S Y +
Sbjct: 216 RHDAKNAKEVYLSNAVTEIWLEDNAQVNHTRVEWDSREAFHIGKTAVTQGRYSRYTCNAI 275
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 365
S GG++SRHN+ + Q G TET L+ ++ +Q D HS + L++P G RQLHK IV
Sbjct: 276 SLGGRVSRHNLEILQTGEQTETNLNGLTVIGGNQLADTHSAIALNYPYGTSRQLHKTIVG 335
Query: 366 HSLGQAVFDGNVKV 379
AVF+G V V
Sbjct: 336 DR-AHAVFNGKVFV 348
>gi|434384446|ref|YP_007095057.1| FeS assembly protein SufD [Chamaesiphon minutus PCC 6605]
gi|428015436|gb|AFY91530.1| FeS assembly protein SufD [Chamaesiphon minutus PCC 6605]
Length = 433
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 163/316 (51%), Gaps = 19/316 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD-------VSTD 125
L +LR ++ L PS KDE +RFT+ + + Q T P++ + V +
Sbjct: 27 LLELRTQAAGYLQEETLPSNKDEEWRFTNLDPLLT---QTFTAPATQVPLVNINGLVLPE 83
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSI 184
A LV ++G +L++LP GV+VG+L ++ +S ++ + G+ +F +I
Sbjct: 84 AINTRLVFVNGIYAPLLSSLADLPAGVFVGNL-AAANATGLAISTYLGKQPGGEEVFTAI 142
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N G + V+++ +E PI+L +++ VD + + PR ++++E+ +I
Sbjct: 143 NTAGINEAAVLWLAPDIVLETPIHLLFITT----VDDTAIA-TQPRTLIVLEQRSSATLI 197
Query: 245 EEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
+E++ D Y+ N+V EV +G K+ H+ +Q++ + A HI TAV Q S Y
Sbjct: 198 QEYLHTSIPDRSYFNNAVTEVWLGDTAKLNHTRIQDEDITAIHIGKTAVSQSQHSAYTGT 257
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 363
+ G KLSRHN + Q+G TET L+ ++ +Q D HS + L P G QLHKCI
Sbjct: 258 SIELGSKLSRHNWEICQIGAQTETYLNGLTMVNGEQESDTHSTIALTKPHGITAQLHKCI 317
Query: 364 VAHSLGQAVFDGNVKV 379
V A+F+G V V
Sbjct: 318 V-DDRAHAIFNGKVFV 332
>gi|428220268|ref|YP_007104438.1| FeS assembly protein SufD [Synechococcus sp. PCC 7502]
gi|427993608|gb|AFY72303.1| FeS assembly protein SufD [Synechococcus sp. PCC 7502]
Length = 434
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 31/330 (9%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----------SQIQPITRPSSS 119
P L+ LR +S L +P+ KDE +R D S ++ PIT P +
Sbjct: 20 PAWLRTLRSEASDRLNYLKFPTPKDEEWRNNDFSELRDIGFALVNAVDKSEDPITNPINI 79
Query: 120 LDVST--DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL-----LGVSDGIMKRVSDFI 172
LD ++ + IDG L LP GV++GSL LG+ + +S +
Sbjct: 80 LDAHILPESAESLITFIDGRFSIEFSALEGLPTGVFIGSLNNFNHLGID--LTASLSPHL 137
Query: 173 SEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRV 231
++ D F ++N D+ V+Y+P + L + S + IS PR
Sbjct: 138 GKYADAEDFFVALNTASIDDVAVVYIPKNLNFIPTVQLLFASHQN--------TISQPRC 189
Query: 232 VVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 291
+V+VE GG + ++E +G++ ++ NSV E+ +G ++ H+ +Q +S A I A
Sbjct: 190 LVIVESGGSLNLVETHIGQDS--LHFCNSVTEIYVGANARINHTKVQTESDQAIWISNCA 247
Query: 292 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 351
+ Q+ +S Y + G K SR N+H+QQLG TET L+ L+ +Q D HS++ +
Sbjct: 248 IVQQRSSAYIKNSIVLGAKKSRTNLHIQQLGEHTETSLNGLTLIGGEQIADTHSQIAHNF 307
Query: 352 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
P G +QLHKCI A +F+G + V++
Sbjct: 308 PNGTSQQLHKCI-ADERSHCIFNGKILVSQ 336
>gi|416376182|ref|ZP_11683447.1| Iron-sulfur cluster assembly protein SufD [Crocosphaera watsonii WH
0003]
gi|357266426|gb|EHJ15056.1| Iron-sulfur cluster assembly protein SufD [Crocosphaera watsonii WH
0003]
Length = 449
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 163/320 (50%), Gaps = 19/320 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSSSLDVSTDAQ 127
L LR ++ + P +KDE +RFTD S + + + +++ + +A+
Sbjct: 34 LHTLRKNAVSQVQELTLPKKKDEEWRFTDLSKLYELDLTIGKTEAVSKNIVDQFILPEAK 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSING 186
LV ++G + N+S L +GV VG+L +SD +++ +++ + + D F ++N
Sbjct: 94 QSYLVFVNGEYASELSNVSALSEGVSVGNLSHLSDAQTEKIVNYLGKSEGEKDTFSALNT 153
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D VI++ +E PI + +L+V S+ + PR +V+ E G ++E
Sbjct: 154 AGLSDAAVIWINKNVVLETPIMVLFLAV-----SSETASLIQPRTLVIAETGSSATLVEY 208
Query: 247 F-------VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ + + N+ Y+ NSV E+ + + H+ +Q + N+ HI + + Q S
Sbjct: 209 YGTITEQSLDVKQNEPYFTNSVTEICLDGNAHINHNRIQRELGNSFHIGRSIITQNQDSH 268
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 359
Y E++ G K+SRH + + Q G TE+ L+ ++ ++Q D H+ + L+HP G QL
Sbjct: 269 YTCNEINLGAKVSRHTLQIIQNGTQTESNLNGLTMIGNEQVADTHTAVCLNHPHGVTHQL 328
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
HKCI+ + + VF+G + V
Sbjct: 329 HKCIMDGN-SRGVFNGKIFV 347
>gi|359463776|ref|ZP_09252339.1| FeS assembly protein SufD [Acaryochloris sp. CCMEE 5410]
Length = 434
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 156/316 (49%), Gaps = 17/316 (5%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD-- 125
P P L+K+R S+ + PS +DE +RFTD S + + T S SL+
Sbjct: 32 PNPKGLEKVRASALSIIQERGLPSNRDEDWRFTDLSGLYKTAFTAPTAASLSLEEIAPFI 91
Query: 126 -AQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A+ P LV ++G+ + NLP G+ V +L + + + + ++F +
Sbjct: 92 LAEAPVRLVFVNGWFAPDLSEIDNLPAGLSVSTLADAGN-----LPELGQQPGMTEVFTA 146
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N D+ V+ + +E PI+L YL+ + +++PR +V+ E +
Sbjct: 147 LNTASFADVAVLRIAKNQVIEAPIHLLYLTTGDTPI------VTSPRGLVVAEANSAATL 200
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
IEE+ + Y+ N+V EV +G+ ++ H +Q ++ A HI TAV Q+ S Y L
Sbjct: 201 IEEYTAVK-TASYFTNAVTEVSLGQNAQLHHYRIQREAKTAFHIGTTAVSQDRDSRYALT 259
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 363
+S GG++SRHN V T+T L+ L V Q D HS L P +QLHKCI
Sbjct: 260 SLSLGGQMSRHNPVVVPTAEQTDTTLNGLTLAVDQQVADTHSDLSFTSPHCTAQQLHKCI 319
Query: 364 VAHSLGQAVFDGNVKV 379
V +L +AVF+G V V
Sbjct: 320 V-DNLARAVFNGRVFV 334
>gi|158334401|ref|YP_001515573.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
gi|158304642|gb|ABW26259.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
Length = 434
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 155/316 (49%), Gaps = 17/316 (5%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL---DVST 124
P P L+K+R+ + + PS +DE +RFTD S + + T S SL D
Sbjct: 32 PNPQGLEKVREGALSIVQERGLPSNRDEDWRFTDLSGLYKTAFTAPTAASLSLEEIDAFI 91
Query: 125 DAQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A+ P LV ++G+ + +LP G+ V +L + + + + ++F +
Sbjct: 92 LAEAPVRLVFVNGWFAPDLSTIDHLPAGLSVSTLADAGN-----LPELGQQPGLSEVFTA 146
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N D+ V+ + +E PI+L YL+ + I++PR +V+ E +
Sbjct: 147 LNTASFADVAVLRIAKNQVIEAPIHLLYLTTGDTPI------ITSPRGLVIAEANSAATL 200
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
IEE+ Y+ NSV+EV +G+ ++ H +Q ++ A HI T+V Q+ S Y L
Sbjct: 201 IEEYAAVNAA-SYFTNSVMEVSLGQNAQLHHHRIQREAKTAFHIGTTSVSQDRDSRYALT 259
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 363
+S GG++SRHN V T+T L+ L V Q D HS L P +QLHKCI
Sbjct: 260 SLSLGGQMSRHNPVVVPTAEQTDTTLNGLTLAVDQQVADTHSDLSFTGPHCTAQQLHKCI 319
Query: 364 VAHSLGQAVFDGNVKV 379
V + +AVF+G V V
Sbjct: 320 VDNR-ARAVFNGRVFV 334
>gi|113477761|ref|YP_723822.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
gi|110168809|gb|ABG53349.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
Length = 453
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 170/327 (51%), Gaps = 29/327 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVST----DAQ 127
LQ++RD ++ + P++KDE +RFT+ +SM+K S P +L+++ +
Sbjct: 41 LQQVRDRAAAWVRELSIPTKKDEEWRFTNLSSMMKLSFQAPTLVDLDALNIAPFILPEVA 100
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G + + + V+VG+L + + KRV +++++ Q G ++F +N
Sbjct: 101 DSRLVFVNGVFAPQLSEVKGIENQVFVGNLGQLPEEYQKRVGNYLAQ-QPGSEEVFTCLN 159
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG-II 244
G D V+++P +E PI+L +++ E ++PI R ++V E G II
Sbjct: 160 TAGLTDAAVVWLPKNQVLEKPIHLLFIATE------TEIPILTQRRCLVVAESNSSGKII 213
Query: 245 EEFVGKE-------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
E V E + Y N+V E+ + + ++ H+ +Q + A HI TA+ Q
Sbjct: 214 EHCVTAEVICPEAPNSHPYLTNTVTEIWVEENAEIDHTRVQRDAGAAFHIGKTAIAQAKN 273
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y ++ GG+LSRHN+ V Q+G TET L L ++Q D HS + L++P
Sbjct: 274 SRYTCNAINLGGRLSRHNLEVVQMGEGTETNLYGLAFLRNEQEIDTHSSITLNYPNSVTD 333
Query: 358 QLHKCIV---AHSLGQAVFDGNVKVNR 381
QL+KCIV AHS +F+G + V++
Sbjct: 334 QLYKCIVDDKAHS----IFNGKIYVSQ 356
>gi|67920339|ref|ZP_00513859.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
gi|67857823|gb|EAM53062.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
Length = 449
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 162/320 (50%), Gaps = 19/320 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSSSLDVSTDAQ 127
L LR ++ + P +KDE +RFTD S + + + +++ + +A+
Sbjct: 34 LHTLRKNAVSQVQELTLPKKKDEEWRFTDLSKLYELDLTIGKTEAVSKNIIDQFILPEAK 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSING 186
LV ++G + N+S L +GV VG+L +SD +++ +++ + + D F ++N
Sbjct: 94 QSYLVFVNGEYASELSNVSALSEGVSVGNLSHLSDAQTEKIVNYLGKSEGEKDTFSALNT 153
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D VI++ +E PI + +L+V S+ + PR +V+ E G ++E
Sbjct: 154 AGLSDAAVIWINKNVVLETPIMVLFLAV-----SSETASLIQPRTLVIAETGSSATLVEY 208
Query: 247 F-------VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ + + N+ Y+ NSV E+ + + H+ +Q + N+ HI + + Q S
Sbjct: 209 YGTITEQSLYVKQNEPYFTNSVTEICLDGNAHINHNRIQRELGNSFHIGRSIITQNQDSH 268
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 359
Y E++ G K+SRH + + Q G TE+ L+ ++ ++Q D H+ + L HP G QL
Sbjct: 269 YTCNEINLGAKVSRHTLQIIQNGTQTESNLNGLTMIGNEQVADTHTAVCLSHPHGVTHQL 328
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
HKCI+ + + VF+G + V
Sbjct: 329 HKCIMDGN-SRGVFNGKIFV 347
>gi|220908817|ref|YP_002484128.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
gi|219865428|gb|ACL45767.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
Length = 451
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 161/315 (51%), Gaps = 20/315 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ---IQPITRPSSSLDVSTDAQFP 129
+Q LRD ++ P+ ++E +RFTD S +++ Q I P P+ + +S
Sbjct: 48 VQDLRDRATALAQELTIPTTREEEWRFTDLSPLRTVQFTAIAPEQSPARAEQISGFVLPE 107
Query: 130 S---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSI 184
S LV ++G +L +P G+ VG+L G + +++ ++++ Q G ++F +
Sbjct: 108 SSLRLVFVNGRFAPELSDLQAIPSGLKVGTLAGQT----AQLNPYLAQ-QAGSEEIFTVL 162
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N D VI V ++E P++L +++V + I++PR +V+ E + ++
Sbjct: 163 NTASFSDAAVIQVDRNQQIEAPLHLLFIAV-----PTSTPTIAHPRCLVMAETSSRLTLV 217
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
EE+V G N+V E+ +G +V H +Q Q+L+ HI TAV Q S Y
Sbjct: 218 EEYV-TVGTGVQLTNAVTEIWLGSNAEVNHIRIQAQALDGFHIGKTAVSQARDSRYTGQA 276
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 364
+S GG++SRHN+ V G T+T L+ L +Q D HS + P +QLHKCIV
Sbjct: 277 ISLGGQISRHNLEVHSAGEQTQTTLNGLTLATGEQLSDTHSTIAFTKPYCTSQQLHKCIV 336
Query: 365 AHSLGQAVFDGNVKV 379
+ +AVF+G V V
Sbjct: 337 SDR-ARAVFNGKVFV 350
>gi|56752363|ref|YP_173064.1| hypothetical protein syc2354_c [Synechococcus elongatus PCC 6301]
gi|56687322|dbj|BAD80544.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 442
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 23/312 (7%)
Query: 74 QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVSTDAQFP-S 130
+ L+ + L PS K E +RFTD S++ +S P + ++ A P
Sbjct: 40 ESLQAQARDRLTDLAIPSTKVEDWRFTDLSLLPKRSFVAAPAQAKAEFVEPLLLADVPLR 99
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
V +DG + + L+ ++ P+G+ + +G I + DLF ++N G
Sbjct: 100 AVFVDGQFR-ADLSSADWPEGLSL--TVGFDAAIAQ-------NLLADDLFATLNTAGFG 149
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
VI V AG + P++L ++S + + S PR ++ + + +IE+F
Sbjct: 150 QAAVIRVAAGAAIAQPLHLLWISSS-----TSETAFSQPRALIELGANSALTLIEDF-AP 203
Query: 251 EGNDC---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 307
GNDC Y+ N+V E+ +G +++HS +Q A HI TAVRQE S Y + VST
Sbjct: 204 LGNDCTADYFVNAVTEIQLGANAQLKHSRVQRDGDRAIHIGTTAVRQERDSRYHGIAVST 263
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 367
G LSRHN Q G ET L L D+ D HS + + P G +QLHKCI A
Sbjct: 264 GAHLSRHNYLAAQDGSQAETILDGLSLADGDRLVDTHSGMFFNQPHGRSQQLHKCI-ASD 322
Query: 368 LGQAVFDGNVKV 379
G+AVF G V V
Sbjct: 323 RGRAVFSGRVVV 334
>gi|81300546|ref|YP_400754.1| iron ABC transporter permease [Synechococcus elongatus PCC 7942]
gi|81169427|gb|ABB57767.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
elongatus PCC 7942]
Length = 442
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 23/312 (7%)
Query: 74 QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVSTDAQFP-S 130
+ L+ + L PS K E +RFTD S++ +S P + ++ A P
Sbjct: 40 ESLQAQARDRLTDLAIPSTKVEDWRFTDLSLLLKRSFVAAPAQAKAEFVEPLLLADVPLR 99
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
V +DG + + L+ ++ P+G+ + +G I + DLF ++N G
Sbjct: 100 AVFVDGQFR-ADLSSADWPEGLSL--TVGFDAAIAQ-------NLLADDLFATLNTAGFG 149
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
VI V AG + P++L ++S + + S PR ++ + + +IE+F
Sbjct: 150 QAAVIRVAAGAAIAQPLHLLWISSS-----TSETAFSQPRALIELGANSALTLIEDF-AP 203
Query: 251 EGNDC---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 307
GNDC Y+ N+V E+ +G +++HS +Q A HI TAVRQE S Y + VST
Sbjct: 204 LGNDCTADYFVNAVTEIQLGANAQLKHSRVQRDGDRAIHIGTTAVRQERDSRYHGIAVST 263
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 367
G LSRHN Q G ET L L D+ D HS + + P G +QLHKCI A
Sbjct: 264 GAHLSRHNYLAAQDGSQAETILDGLSLADGDRLVDTHSGMFFNQPHGRSQQLHKCI-ASD 322
Query: 368 LGQAVFDGNVKV 379
G+AVF G V V
Sbjct: 323 RGRAVFSGRVVV 334
>gi|427417545|ref|ZP_18907728.1| Iron-regulated ABC transporter permease protein SufD [Leptolyngbya
sp. PCC 7375]
gi|425760258|gb|EKV01111.1| Iron-regulated ABC transporter permease protein SufD [Leptolyngbya
sp. PCC 7375]
Length = 426
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 157/337 (46%), Gaps = 33/337 (9%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQI 110
L E LE + S+ S PL L LR ++ + +PS +DE +RFTD +SM++ S
Sbjct: 14 LGELLEQAALSAKQS---PLGLDALRAAARALVQERTFPSNRDEDWRFTDLSSMLEMSFQ 70
Query: 111 QP-------ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
P I L + LV ++G +S LSN+ DG V S
Sbjct: 71 APGALKDAVIAEAKQQLANISLGDTARLVFVNGIFADS---LSNISDGTSVLSQ------ 121
Query: 164 IMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ D +++ Q ++F ++N G D V+++ +E PI + YL++ G
Sbjct: 122 -AEATPDALAQIQGSNEVFTALNTAGFTDAAVLHIKKNTAIEQPIQIVYLTIGHG----- 175
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
PR +V+ E G V ++EEF G+ + NSV EV + +V H LQ +S
Sbjct: 176 --LFVQPRCLVVAEAGSAVTLVEEF---HGSGASFTNSVSEVWVHDNAEVTHLRLQQESS 230
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
A HI TAV Q S Y G +SRHN+ V Q GP TET+L+ + Q D
Sbjct: 231 EAVHIGKTAVSQARDSRYRNTAFIFGAGISRHNLEVYQTGPQTETKLTGLTAVRGRQLAD 290
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
HS + L+HP G QL K I+ VF+G V V
Sbjct: 291 THSLIALNHPHGTANQLQKNIM-DDRSHGVFNGRVYV 326
>gi|86606834|ref|YP_475597.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
gi|86555376|gb|ABD00334.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
Length = 429
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 156/319 (48%), Gaps = 24/319 (7%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST------- 124
P LR + L P+ ++E ++++D S + + + + SLD +T
Sbjct: 30 PYTTLRQQARAQLAELGIPTPREEDWKYSDLSPLLAHKFRLAAAGDPSLDAATLEPWLWP 89
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
+A + V ++G+ +LS LP + V L +++ ++ D+F ++
Sbjct: 90 EASYSRAVFVNGYFAPQLSDLSGLPTALQVIPLAQAPGELLQTLAK-------TDVFTAL 142
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPISNPRVVVLVEEGGEVG 242
N D I + G +V +P++L +++V EG V ++ PR ++ ++ +
Sbjct: 143 NTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAV------LAQPRCLLSLQAHSSLT 196
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+IE+ V G+ ++N+V E+ + +G ++ H LQ Q A HI TAVRQ S Y L
Sbjct: 197 LIEDHVSL-GSGIPFSNAVTEIALAEGSRLHHVILQRQGSPAFHINKTAVRQSCDSHYRL 255
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
+ G + SRHN+ + Q G T+L LL Q D HSRLL P G RQLHKC
Sbjct: 256 QAIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHSRLLHQAPHGSSRQLHKC 315
Query: 363 IVAHSLGQAVFDGNVKVNR 381
IV + +AVF G + V++
Sbjct: 316 IVDEA-ARAVFSGRILVSQ 333
>gi|86608871|ref|YP_477633.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557413|gb|ABD02370.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 430
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 153/319 (47%), Gaps = 24/319 (7%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST------- 124
P LR + L P+ ++E ++++D S + + + + SLD +T
Sbjct: 30 PYTTLRQQARAQLAELGIPTPREEDWKYSDLSPLLAHKFRLAAAGDPSLDAATLEPWLWP 89
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
+ + V ++G+ +LS LP + V L +++ ++ D+F ++
Sbjct: 90 ETSYSRAVFVNGYFAPQLSDLSGLPTALQVIPLAQAPGELLQTLAK-------TDVFTAL 142
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPISNPRVVVLVEEGGEVG 242
N D I + G +V +P++L +++V EG V ++ PR ++ ++ +
Sbjct: 143 NTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAV------LAQPRCLLSLQAHSSLT 196
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+IE+ V G+ + N+V E+ + +G ++ H LQ Q A HI TAVRQ S Y L
Sbjct: 197 LIEDHVSL-GSGIPFGNAVTEIALAEGSRLHHVILQRQGSPAFHINQTAVRQSRNSHYRL 255
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
+ G + SRHN+ + Q G T+L LL Q D HSRL+ P G RQLHKC
Sbjct: 256 QSIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHSRLVHQAPHGSSRQLHKC 315
Query: 363 IVAHSLGQAVFDGNVKVNR 381
IV + AVF G + V+R
Sbjct: 316 IVDET-AHAVFSGRILVSR 333
>gi|282900437|ref|ZP_06308387.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
gi|281194750|gb|EFA69697.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
Length = 461
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 174/356 (48%), Gaps = 37/356 (10%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F+ +L L + S +P L+++R ++++ + + P+ +DE +RFTD S +
Sbjct: 20 DAFLTRLLNQLNEICLSK-----EPSWLEQVRTNATKWVRHSVIPTTRDEEWRFTDLSPL 74
Query: 106 KSSQIQPITRPSSS---LDVSTDAQ---FPS----LVLIDGFIQNSALNLSNLPDGVYVG 155
+ + SS ++ D + P LV I+G + + S+LP G++VG
Sbjct: 75 REISFALGSNLGSSQIAMESFMDMEGLGLPEATHRLVFINGVLTPTLSQTSDLPSGLHVG 134
Query: 156 SLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
+L + D + ++ ++++F D+F +N G D+ V++ VE+PI L ++S+
Sbjct: 135 NLNSLEDSVAQK---YLAQFDGTRDVFSDLNTAGLSDVAVVWARKNVVVEDPIQLLFISL 191
Query: 215 EGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFVG----------KEGNDCYWANSVLE 263
G + P PR +V+ E ++ +IEE + G + + NSV E
Sbjct: 192 VG------EFPTFCQPRCLVIAEGNSQISLIEEHITLNTPSPQNNPSPGLNSGFNNSVTE 245
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 323
+ + + ++ HS + ++ I TAV Q S Y ++ GGK+SRHN+ + Q G
Sbjct: 246 IWVHENAQINHSRIVLGGDHSFDIGKTAVTQARYSRYSCNAITIGGKISRHNLELVQTGE 305
Query: 324 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
TET L+ ++ Q D HS + L++P +QLHK I+ VF+G + V
Sbjct: 306 QTETNLNGLTVIAQKQLGDTHSAIALNYPYATSKQLHKLIIGDR-AHGVFNGKIFV 360
>gi|282897159|ref|ZP_06305161.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
gi|281197811|gb|EFA72705.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
Length = 460
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 173/358 (48%), Gaps = 42/358 (11%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F+ +L L PS +P L+++R ++++ + + P+ +DE +RFTD S +
Sbjct: 20 DAFLTRLLNQLNGICPSK-----EPSWLEQVRTNATKWVRHSVIPTTRDEEWRFTDLSPL 74
Query: 106 K-----------SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV 154
+ SSQI S ++ LV I+G + + S+LP G++V
Sbjct: 75 REINFALGSNLGSSQI---AMESLMEGLALPEATHRLVFINGVLTPTLSQTSDLPSGLHV 131
Query: 155 GSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
G+L + D + ++ ++++F D+F +N G D+ V++ VE+ I+L ++S
Sbjct: 132 GNLDSLEDSVAQK---YLAQFDGTRDVFSDLNTAGLSDVAVLWAGKNVVVEDSIHLLFIS 188
Query: 214 VEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV-----------GKEGNDCYWANSV 261
+ G + P PR +V+ E ++ ++EE++ G + + NSV
Sbjct: 189 LVG------EFPTFCQPRCLVIAEGNSQISLVEEYIILNTPSLQNNPMGAGLNTGFNNSV 242
Query: 262 LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQL 321
E+ + + +V HS + ++ I TAV Q S Y ++ G K+SRHN+ + Q
Sbjct: 243 TEIWVHENAQVNHSRIVLGGDHSFDIGKTAVTQARHSRYSCNAITIGSKISRHNLELIQT 302
Query: 322 GPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
G TET L + ++ Q D HS + L++P +QLHK I+ VF+G + V
Sbjct: 303 GEQTETNLYALTVIAQKQLGDTHSAIALNYPYATSKQLHKLIIGDR-AHGVFNGKIFV 359
>gi|254422828|ref|ZP_05036546.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
gi|196190317|gb|EDX85281.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
Length = 462
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 166/349 (47%), Gaps = 41/349 (11%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP----S 117
+++++ PL L+ LRD + + +PS KDE +RFTD S + QP R S
Sbjct: 28 AAAAADESPLGLKALRDQAIALVNERSFPSGKDEEWRFTDLSKMLD---QPFQRSQPVYS 84
Query: 118 SSLDVSTDAQFPS----LVLIDGFIQNS-ALNLSNLPDGVYVG---SLLGVSDGIMKR-- 167
+ D + + S L I+G +S + + D VG LL SD K
Sbjct: 85 QADDWNAHLKLLSDGTCLTTINGHYDSSLSREVDQSTDKAIVGPLSELLKNSDYAEKLGP 144
Query: 168 -VSDFISEFQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+ D +++ + G ++F ++N +G D+ V++V A V+ PIY+ S +GG
Sbjct: 145 ILKDKLAQIKGGSEVFTALNTVGFADVMVVWVQADQVVDAPIYIARGS-QGG-------F 196
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVG-------------KEGNDCYWANSVLEVVIGKGGKV 272
IS+ R +V+ E + ++E F G E + NSV E+ + +G +V
Sbjct: 197 ISHVRSLVIAERHAKFTLVESFFGPAEATNAQCSVGQDEPTETCCNNSVTEIWLAEGAQV 256
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 332
H +Q++S N H+ TAV Q S Y+ V G KLSRH+V V Q G T+T+L
Sbjct: 257 NHIRVQDESANTFHLAKTAVDQAANSQYQCTAVDLGAKLSRHHVEVYQSGAQTDTKLYGL 316
Query: 333 HLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L Q D HS L L +P G Q+ K IV VF+G V V++
Sbjct: 317 SALGDRQLADTHSLLALTYPYGSATQIQKNIV-DDQSHCVFNGKVYVSK 364
>gi|398893986|ref|ZP_10646416.1| FeS assembly protein SufD [Pseudomonas sp. GM55]
gi|398183118|gb|EJM70613.1| FeS assembly protein SufD [Pseudomonas sp. GM55]
Length = 439
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 157/327 (48%), Gaps = 28/327 (8%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST---- 124
P L++LR ++ Q + +P+ KDE +++T + I + ++P P +S +S
Sbjct: 21 HPAWLRELRSAAFQWVAEHGFPTAKDEAWKYTRVAPILETSLRP-AEPGTSRGLSDASIE 79
Query: 125 ----DAQFPSLVLIDGFIQNSALNLSNLPDGVYV---GSLLGVSDGIMKRVSDFISEFQC 177
D P LV ++G+ L LP G V +LL G+++ + F F+
Sbjct: 80 RLIGDYGGPRLVFVNGYFAAEFSVLEELPPGTQVTHFATLLRADSGMLEAL--FSHAFRT 137
Query: 178 G-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLV 235
F ++N A D ++ +PA VE PI+L + S D+ P+ ++PR +VL+
Sbjct: 138 QPQAFTALNAALAEDGALVQIPAHTTVEKPIHLVFFS------DTGATPLMTHPRALVLM 191
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
G + ++E VG G + Y +N+V EV++ + H +QN+S A H+ VRQ
Sbjct: 192 GAGSRLTLVESHVGS-GAEAYLSNAVSEVLLDADAVLEHYSVQNESTAAFHVALLNVRQA 250
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PR 353
S + + G L+R V + GP E L+ +L TQ L ++ ++H PR
Sbjct: 251 RGSYFAAHSFALGAALARQEVRIILEGPGAEVALNGLYL--PRGTQHLDNQTTIEHLAPR 308
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKVN 380
R+L+K ++ G +FDG + V
Sbjct: 309 CTSRELYKGVI-DDRGHGIFDGRIIVR 334
>gi|284929291|ref|YP_003421813.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
gi|284809735|gb|ADB95432.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
Length = 443
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 157/322 (48%), Gaps = 19/322 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-----PITRPSSSLDVSTDAQ 127
Q L+ S Q + +P+ K+E +RF + + + Q + IT+ S V ++A
Sbjct: 30 FQSLKQDSLQKIKELSFPTSKEEEWRFMNLAELYKYQFKIAKATKITKESIKDLVVSEAN 89
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSING 186
+V +DG + +++ D +++G+L V D + ++ Q D+F +N
Sbjct: 90 SNCIVFVDGQYDRALSDIALSSDDIFIGTLQDVPDIKKNEIYTLLNSDQNKKDIFSRLNT 149
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
+G D +I V +++PI L +++ + N L I PR +V+ E+G ++ I+E
Sbjct: 150 IGLVDPAIIIVNENITIKDPIQLLFIATKQKN----SLLIQ-PRTLVVAEKGSDLSIVEY 204
Query: 247 FVGKEGNDC-------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ E Y+ NSV E+ + +V HS +Q +S + HI + + Q S
Sbjct: 205 YSTVENPYLELDQIVPYFTNSVTEIFLKDNSRVIHSRIQLESNISFHISKSNITQNQDSF 264
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 359
Y L + G K+SR+N+ + Q G TE+ L+ LL +DQ + + L++P G QL
Sbjct: 265 YVLNQFDLGSKVSRNNIEIFQNGARTESYLNGLSLLGNDQISCTKTSINLNYPNGIIDQL 324
Query: 360 HKCIVAHSLGQAVFDGNVKVNR 381
HK ++ +FDG + V++
Sbjct: 325 HKYVIDDK-AHGIFDGKIIVSK 345
>gi|89900648|ref|YP_523119.1| FeS assembly protein SufD [Rhodoferax ferrireducens T118]
gi|89345385|gb|ABD69588.1| Iron-regulated ABC transporter permease protein SufD [Rhodoferax
ferrireducens T118]
Length = 442
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 156/340 (45%), Gaps = 27/340 (7%)
Query: 54 ESLEDSLPSSSSSL--PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+ L SL ++ SL QP L LR + + + + PS DE +RFT +
Sbjct: 15 DGLLASLTQTAGSLVSTQPKWLTTLRAQALERVGALTLPSTHDEAWRFTPLATFARQSFH 74
Query: 112 PITRPSSSL-----DVSTDAQFPSLVLIDGFIQNSALNLSNL-PD-GVYVGSLLGVSDGI 164
P+ P++ L + + LV +DG A LS+L PD G+ VG+L +
Sbjct: 75 PLRTPTALLPGDIKHLHIEEVTTRLVFVDGV---HAPQLSSLKPDAGLAVGTLASMLARQ 131
Query: 165 MKRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ + + LF ++N D V+ VP + P+++ Y+S +
Sbjct: 132 ASSIEPHLGQHLAFHDALFAALNTAFLQDAAVLVVPRETTLAAPVHVLYISTQPDVA--- 188
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
S+PR++++ G + +IE++V Y+ N+V EV +G +V H +Q +S
Sbjct: 189 ----SHPRLLLVAGAGSKATLIEDYVALHPG-TYFTNAVAEVALGANAQVSHVRIQRESQ 243
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
A H+ AV AS Y ++ GG++SR ++ V Q E L L+ Q D
Sbjct: 244 QAFHMASCAVSLGAASRYHSASITLGGQISRLDLKVLQSADAAECALDGLALIGGQQLAD 303
Query: 343 LHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
H+ +DH P G RQLHKCIV + AVF+G V V
Sbjct: 304 THT--FIDHAKPHGVSRQLHKCIVGGA-AHAVFNGQVMVR 340
>gi|30249419|ref|NP_841489.1| hypothetical protein NE1448 [Nitrosomonas europaea ATCC 19718]
gi|30138782|emb|CAD85359.1| Uncharacterized protein family UPF0051 [Nitrosomonas europaea ATCC
19718]
Length = 435
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 160/342 (46%), Gaps = 35/342 (10%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
E L +S +S + L +LR+ + + S P+ +DE +RFTD S ++S P
Sbjct: 11 EKLIESWKKEASPVHSVSYLDQLREDALDRIESLRLPTIRDEEWRFTDISSLRS---MPF 67
Query: 114 TRPSSS----LDVST----DAQFPSLVLIDGFIQNSALNLSNLPDG-----VYVGSLLGV 160
R S++ LD D LV +DG + LS+L D + L+G
Sbjct: 68 PRASAAPLPGLDKQAGTFLDETACRLVFVDGQYMS---GLSSLADDGSITVCSLSELIGT 124
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
I +R +++FQ ++F ++N D I +PAG V+ P+++ Y V
Sbjct: 125 RASIAERYFGQLADFQ-ENVFVALNTALMHDGVCIVIPAGVSVKVPVHILY-------VT 176
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
S+K PR +++ E G V ++EE+V EG N+V E+ I V H +Q
Sbjct: 177 SRKDVAVYPRCLLIAEPGANVTVVEEYVTLYEGAS--LTNAVTEMYIRDSACVNHIRVQR 234
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+S A HI +V ++ Y+ V ++ G ++SR + + G + E E+ L+ Q
Sbjct: 235 ESSQAFHIANGSVLVAQSAHYDSVSLALGARISRFDQKIILAGGNAECEVDGLALIAGRQ 294
Query: 340 TQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKV 379
D H+ +DH +CR QLHKCIV S VF G + V
Sbjct: 295 LADTHT--FIDHANPHCRSRQLHKCIVDES-AHGVFSGKIMV 333
>gi|387129251|ref|YP_006292141.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM7]
gi|386270540|gb|AFJ01454.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM7]
Length = 430
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 160/340 (47%), Gaps = 21/340 (6%)
Query: 51 QLAESLEDSLPSSS----SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK 106
QL E D +P + + LP P + LR S Q P ++DE +++T
Sbjct: 3 QLTEFQTDFIPVAEMRRENGLPNP-DWRGLRASGQQYFERNGLPGKRDEDWKYTSLWSFS 61
Query: 107 SSQI-----QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
Q QP ++ + +DA LV++DG I +A +LS LPDGV V L
Sbjct: 62 QQQFTHDVSQPGHVNAADWQLLSDAY--QLVIVDGHIDFTASSLSGLPDGVTVQPLSQSL 119
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
D M ++ IS + G F ++N M + I+V AG K++ PI L L V GN
Sbjct: 120 DAAMPYLNQQISLEKSG--FNALNTMLMSEGAYIHVAAGVKLKKPIEL--LVVNSGNTAD 175
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ + R VV++E E +IE + + + NS+ E+ + K+ H LQ +S
Sbjct: 176 LAVHL---RHVVVMEAESEATLIELYASPD-DTTGLTNSITEIDLADRAKLFHYKLQRES 231
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
HI A +Q +S + +S GG+L+R++VH Q LG ++ +L+ Q
Sbjct: 232 KQQFHIATMAAKQAQSSEWHNHNISLGGQLARNDVHSQLLGEQAHVTMNGLYLVDGRQHV 291
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+R+ P +L+K ++ AVF+G V V+R
Sbjct: 292 DNHTRIDHTIPNTTSDELYKGVMDDK-SHAVFNGKVHVHR 330
>gi|209516301|ref|ZP_03265158.1| FeS assembly protein SufD [Burkholderia sp. H160]
gi|209503237|gb|EEA03236.1| FeS assembly protein SufD [Burkholderia sp. H160]
Length = 441
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 154/337 (45%), Gaps = 18/337 (5%)
Query: 54 ESLEDSLPSSSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+ L + + SS+LP LP L++ R + +T + +P+ + E +++T+ + I
Sbjct: 7 DYLHQAFQTVSSTLPGAELPWLRRARHDAFETFEALGFPTTRLEDWKYTNVATIAKRPWH 66
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ S DV D LV ++G + LPD +VGSL +
Sbjct: 67 FTSPRSDEPDVERIVDQLVPDTTVGRLVFMNGHHIPRLSRVPALPDAAFVGSLTRALREM 126
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+R+ I+ D F ++N D V+ +P C ++ P+ + +L+ E G L
Sbjct: 127 PERLMGVIAHQAPHDGFAALNTAFLSDGYVVLLPPDCAIDAPLVMLFLTDEAG------L 180
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ +P ++ + I+E+FVG + Y N+V +V G V+H +QN++ NA
Sbjct: 181 AV-HPFNTIVADARSRCSIVEQFVGI-ADGAYLINAVTRIVTGNEADVQHCRIQNEARNA 238
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
HI V QE AS + + GG LSR + + D EL+ + + Q D H
Sbjct: 239 FHIAHVDVTQERASRFTSHSFAFGGALSRTQIDTRLQDVDANAELNGLYFADAKQHVDHH 298
Query: 345 SRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+R+ D P G R+ ++ ++ VF+G V V+R
Sbjct: 299 TRIDHDKPHGTSREYYRGVL-DGASHGVFNGKVIVHR 334
>gi|82701831|ref|YP_411397.1| FeS assembly protein SufD [Nitrosospira multiformis ATCC 25196]
gi|82409896|gb|ABB74005.1| Iron-regulated ABC transporter permease protein SufD [Nitrosospira
multiformis ATCC 25196]
Length = 440
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 149/332 (44%), Gaps = 39/332 (11%)
Query: 68 PQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
P PL +LR ++ P+ +DE +RFTD S + QP R + +L +
Sbjct: 24 PSPLAWFNQLRANAVDHAGRLKLPTTRDEEWRFTDLSPLVRHSFQP-ARAAPALQTADVE 82
Query: 127 QFP------SLVLIDG-----------FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
F LV +DG + N L ++NL + + + I +
Sbjct: 83 HFSLTEAAIRLVFVDGKYMPQLSTPAERLGNRGLIVTNLSSAITANA-----EAIEPHLG 137
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+ + F+ G+LF ++N D ++ VP G ++ P+++ V ++ S+P
Sbjct: 138 QY-ARFE-GNLFAALNTAFLHDGALVIVPRGAVIDTPVHVLL-------VTTQPEVASHP 188
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
R + + E G EV I+E++V Y N+V E+ +G ++ H +Q S A HI
Sbjct: 189 RCLFIAEAGSEVTILEDYVSL-NEAIYVTNAVTEIAVGDNAQISHIRVQRDSTEAFHIGN 247
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
AV AS Y V V+ G ++SR++++ E + L+ Q D HS +
Sbjct: 248 CAVSLAHASRYRSVSVALGARISRYDLNTALAAEGAECVIDGLALINGRQLADTHSSI-- 305
Query: 350 DHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
DH R C RQLHKCI A AVF+G + V
Sbjct: 306 DHARPNCTSRQLHKCI-ADGSAHAVFNGKIMV 336
>gi|374293753|ref|YP_005040776.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum lipoferum 4B]
gi|357427156|emb|CBS90094.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum lipoferum 4B]
Length = 445
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 148/314 (47%), Gaps = 13/314 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD----VSTDAQ- 127
L +LR + + + P+ ++E +R+T+ + QP ++++D V + Q
Sbjct: 35 LNELRAAGRERFAAVGLPTIRNESWRYTNLRDLAKVSFQPAAPAAATIDLLPTVRAEGQD 94
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSIN 185
P LV +DG + ++ LP GV + SL ++D I D ++N
Sbjct: 95 GPRLVFVDGRFRADLSSVDGLPPGVELLSLAAALTTHSDLLADHIGRLAAADDRPLVALN 154
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D V++VPAG +VE PI L ++SV + +PR +++ E G + ++E
Sbjct: 155 SAYLADGAVLHVPAGVQVERPIELVFVSVG----TEAQATSCHPRSLLIAEAGSKAVVVE 210
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
VG+ G +N V EV +G+G + H Q + A H+ A T Y+ +
Sbjct: 211 HHVGR-GAGTTLSNHVTEVFVGEGATLHHYKSQREGGGAIHLSHIAATVATGGCYDNFIL 269
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 365
+TG KLSR+ V + G + T +S +L+ Q D + ++ P G R+++K ++
Sbjct: 270 TTGAKLSRNEVVSRLDGTEARTHVSGGYLVRGSQHADTTTVIVHAQPNGTSREVYKGVID 329
Query: 366 HSLGQAVFDGNVKV 379
+ +AVF G + V
Sbjct: 330 DT-ARAVFQGKITV 342
>gi|339483424|ref|YP_004695210.1| FeS assembly protein SufD [Nitrosomonas sp. Is79A3]
gi|338805569|gb|AEJ01811.1| FeS assembly protein SufD [Nitrosomonas sp. Is79A3]
Length = 436
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 150/327 (45%), Gaps = 38/327 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
L +LR + + + P+R+DE +RFTD S + QP ++P +L F
Sbjct: 28 LNQLRTQAIDRVGTQKLPTRRDEEWRFTDISPLVHLPYQP-SQPECNLLAHDIEHFYLKE 86
Query: 129 --PSLVLIDGF-----------IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
LV +DG + +AL + NLP +V + V + + F +
Sbjct: 87 AKHRLVFVDGHYSPNLSTIIDPVDPAALVIGNLP--AFVATHASVLESHLGHYVHFDN-- 142
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
+LF ++N D +I VP + PI+L +++ + S PR +++
Sbjct: 143 ---NLFAALNTAFLRDGALIIVPKNIAIAEPIHLLFIATQNE-------VTSYPRCLLIG 192
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
E G V +IE++V + Y NSV E+ + + +H +Q +S A H+ AV
Sbjct: 193 EAGSNVTLIEDYVALQ-QATYITNSVTEISLAANAQAKHIRIQRESTQAFHLANCAVSLA 251
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PR 353
AS Y+ +S G ++SR+N++V+ E + L+ Q D H+ +DH P
Sbjct: 252 HASNYQSTSISLGSQISRYNLNVRLTDAAAECVVDGLTLISDHQLADTHT--CIDHVKPN 309
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKVN 380
G RQ HKCIV + AVF+G + V+
Sbjct: 310 GTSRQHHKCIVDDA-AHAVFNGKIIVH 335
>gi|427712068|ref|YP_007060692.1| iron-regulated ABC transporter permease SufD [Synechococcus sp. PCC
6312]
gi|427376197|gb|AFY60149.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. PCC 6312]
Length = 448
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 147/310 (47%), Gaps = 14/310 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD---AQFP 129
L +LR +++ L P+ + E +RFTD S+I + P P + T +
Sbjct: 45 LGQLRQTAADALHEQFIPTTRQEEWRFTDLSLITQAPFSPPAHPPDLATLPTQRIAEKHL 104
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+VL++G ++ N GV VG+L + + ++F ++N
Sbjct: 105 RMVLVNGVYAPDLSDVGNSHAGVMVGNLAQARPETLALLGQLPGR---EEVFTALNTASC 161
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D+ I V A I+L +L+ + + + +PRV+V+++ G + ++E+++
Sbjct: 162 RDVLTIEVGAKVCPGFVIHLVFLTT------APQATLISPRVLVVLQPGSSLTLVEDYIS 215
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
E D N+V E+ +G ++ H+ +Q Q+ A HI T + Q S Y ++ GG
Sbjct: 216 GE-MDTALTNAVTEIYLGNQAELDHTRIQRQAPTALHIGKTVISQAQHSQYSGHAITWGG 274
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
+LSRHN V GP+T T L + ++Q D HS L+ P +Q++K IV
Sbjct: 275 QLSRHNWDVNSNGPETTTILEGLTVATANQLADTHSSLIFSAPHCSSQQVNKYIVG-GRA 333
Query: 370 QAVFDGNVKV 379
+AVF+G + V
Sbjct: 334 RAVFNGKIVV 343
>gi|373488168|ref|ZP_09578833.1| Iron-regulated ABC transporter permease protein SufD [Holophaga
foetida DSM 6591]
gi|372006493|gb|EHP07125.1| Iron-regulated ABC transporter permease protein SufD [Holophaga
foetida DSM 6591]
Length = 422
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 157/327 (48%), Gaps = 17/327 (5%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS 117
D LP +++ +P + LR + L +P+ K E +++TD + +K+ +P
Sbjct: 6 DFLPEVAAA-SRPKEWETLRAKAETHLDGKSYPAPKAEDWKYTDLAPLKTLAPKPGIHAC 64
Query: 118 SSL--DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
+ + +++ LV ++G N S LP GV + L S+ + +
Sbjct: 65 VDIRGHILPESRGARLVFVNGHYDPHYSNASGLPPGVRMLQLASASE-AASALGTLATPE 123
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
C D+F ++N D IYVP G +VE +++ ++ G D + ++PR++V++
Sbjct: 124 TC-DVFANLNTAKFADGAFIYVPKGLQVEPVLHVCFM----GAPDGDQATCAHPRLLVVL 178
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
E+G E+ ++EE+ G Y+ N++ EV++ G ++RH +Q +S A H+ +
Sbjct: 179 EKGAELHLVEEY---SGQGSYFTNALTEVIVKDGAELRHERIQLESPEAIHLCHLRAQVG 235
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
++ Y +S G +LSR + HV + L LL Q D HS ++DH +
Sbjct: 236 RSARYFSRTISFGARLSRQSPHVVLADEGAKVHLDGLALLDGQQVADTHS--IIDHTQAN 293
Query: 356 C--RQLHKCIVAHSLGQAVFDGNVKVN 380
C RQLHK I + VF+G + V
Sbjct: 294 CSSRQLHKAI-GDGQSRIVFNGKIFVR 319
>gi|288961956|ref|YP_003452266.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
gi|288914236|dbj|BAI75722.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
Length = 454
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 145/312 (46%), Gaps = 11/312 (3%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---P 129
L +LR + + + P+ K+E +R+T+ + + ++S+D+ + P
Sbjct: 46 LTELRAAGRERFAAVGLPTIKNESWRYTNLRDLAKTSFLSAAPAAASIDLLPTLRAEGGP 105
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGM 187
LV +DG + ++ LP GV + SL ++D I D ++N
Sbjct: 106 RLVFVDGRFRADLSSVGGLPPGVELLSLAAALTSHGDLLADHIGRLAVADDRPLVALNSA 165
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
D V++VPAG +VE P+ L ++SV + +PR +++ E G + ++E
Sbjct: 166 YLADGPVLHVPAGVQVERPVELVFVSVG----SEAQATACHPRSLLVAEAGSKAAVVEHH 221
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 307
VG+ G AN V EV +G+G + H Q + A H+ A Y+ ++T
Sbjct: 222 VGR-GAGTTLANHVTEVFVGEGATLHHYKSQCEGGGAIHLSHIAATVAAGGCYDNFILTT 280
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 367
G KLSR+ V + G D T +S +L+ Q D + ++ P G R+++K ++ S
Sbjct: 281 GAKLSRNEVVSRLDGTDARTHVSGGYLVRGTQHADTTTLIVHAQPNGTSREVYKGVIDDS 340
Query: 368 LGQAVFDGNVKV 379
+AVF G + V
Sbjct: 341 -ARAVFQGKITV 351
>gi|22299448|ref|NP_682695.1| hypothetical protein tlr1905 [Thermosynechococcus elongatus BP-1]
gi|22295631|dbj|BAC09457.1| tlr1905 [Thermosynechococcus elongatus BP-1]
Length = 432
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 16/307 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
L LR ++ L P+ +DE +RFTD S++++ QP P + L+ A+ L+
Sbjct: 38 LAVLRQTARDRLHEQTLPTPRDEDWRFTDLSVLRTRTFQP---PIAPLNPEIVAEVQHLL 94
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDL 192
F + + L DG + G L V ++ + + ++F +N +
Sbjct: 95 CERSFPTVAQIVLI---DGYFCGELSRVDAAGVELLPPSLPAIAPPEVFSDLNAAMLAER 151
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+ + + P+ + ++S ++ + +PR+ V V G+V +IE F+ G
Sbjct: 152 LCLRLSGHFR--EPVEVFFVS------SRQQQSVVSPRLTVEVAAHGQVTLIERFLSLTG 203
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
D + N+V E+ +G + H +Q+QS A HI TAV Q S YE + GG LS
Sbjct: 204 -DQQFTNTVTEISLGAAAGLHHVRIQHQSPTAIHIGSTAVCQAQDSAYEGHAIDLGGCLS 262
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 372
RH+ VQ G ++T L + + +Q D HS +L P Q+HKCI+ +
Sbjct: 263 RHHWQVQIQGSGSQTILKGLAIAMDEQIVDTHSAVLFHAPHSRSEQIHKCILGDR-AHGI 321
Query: 373 FDGNVKV 379
F+G V V
Sbjct: 322 FNGRVVV 328
>gi|381160203|ref|ZP_09869435.1| FeS assembly protein SufD [Thiorhodovibrio sp. 970]
gi|380878267|gb|EIC20359.1| FeS assembly protein SufD [Thiorhodovibrio sp. 970]
Length = 449
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 19/323 (5%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL---DVSTD 125
+P L +R ++++ + P+++ E +R+T + QP P ++L D+ D
Sbjct: 30 EPDWLTAMRAAATERASNQGVPTKRSEGWRYTSLRALIDQGFQPHQEPITALQPEDIE-D 88
Query: 126 AQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD- 179
P L V+++G + L LP GV +GSL V ++ + + GD
Sbjct: 89 QLIPGLDSHRLVMVNGHFEPRLSQLEGLPAGVRIGSLADVLAQDADALAGLLGQI-AGDG 147
Query: 180 --LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVE 236
LF S+N G D V+ + A ++E P+ L +S+ +D + P ++ PR ++ +
Sbjct: 148 QHLFTSLNTAGFDDGLVMLIDAKVRLERPVELLNISI---GLDQAEGPGLAQPRHLIHLA 204
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
G + +IE + G+ Y N+V+E+ + + ++ H LQ +S +A H+ + Q+
Sbjct: 205 AGAQAELIERHL-SFGDALYCNNAVVEIRLAEQARLHHVRLQQESPSAYHLTGLYLEQDA 263
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
AS Y V + GG +R ++ + L P+ + EL +L Q D H + P
Sbjct: 264 ASRYRSVNIGMGGVWARTDLVARFLAPEADCELQGLYLAGDGQLIDYHMDVQHLVPGCAS 323
Query: 357 RQLHKCIVAHSLGQAVFDGNVKV 379
R+ K I+ H G+AVFDG V V
Sbjct: 324 RENFKGIL-HGKGKAVFDGRVYV 345
>gi|114331235|ref|YP_747457.1| FeS assembly protein SufD [Nitrosomonas eutropha C91]
gi|114308249|gb|ABI59492.1| Iron-regulated ABC transporter permease protein SufD [Nitrosomonas
eutropha C91]
Length = 435
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 165/348 (47%), Gaps = 35/348 (10%)
Query: 46 DPFVIQLAESL-EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
D ++ +L ES ++ PS + S L +LR ++ + S P+ +DE +RFTD S
Sbjct: 7 DDYLEKLIESWRKEGEPSRTVSY-----LNRLRANALSRIESLRLPTIRDEEWRFTDISS 61
Query: 105 IKSS---QIQPITRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPD--GVYVGSL 157
++++ + + P ST P+ LV +DG LS L D + V SL
Sbjct: 62 LRNTLFPRASTASLPGLDSQKSTFLDEPTCRLVFVDG---QYMPGLSGLTDDGSIIVCSL 118
Query: 158 LGVSDGIMKRVSDFI---SEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
++ + ++ ++FQ D+F ++N D I +PA + P+++ Y++
Sbjct: 119 SELTGICASKTEQYLGQLADFQ-DDVFVALNTALMHDGICIVIPANVSITVPVHILYIT- 176
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVR 273
S K + PR +++ E EV I+EE+V +EG N+V E+ +G+ +V
Sbjct: 177 ------SGKEVAAYPRCLLVAESEAEVTIVEEYVAWQEG--VSLTNAVTEIYVGESARVN 228
Query: 274 HSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFH 333
H +Q ++ A HI + + Y+ V ++ G ++SR + + G E ++
Sbjct: 229 HIRVQREASQAFHIANNSTFVAKTAHYDSVNLALGARISRFDQKITLAGEGAECQIDGLA 288
Query: 334 LLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
L+ Q D H+ +DH P G RQLHKCIV S VF G + V
Sbjct: 289 LIADRQLADTHT--FIDHASPHGRSRQLHKCIVDES-AHGVFSGEIMV 333
>gi|325982997|ref|YP_004295399.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
gi|325532516|gb|ADZ27237.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
Length = 435
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 152/337 (45%), Gaps = 36/337 (10%)
Query: 60 LPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS 118
L S S+ +PL L +LR + + + P+++DE +RFTD S + Q +P +
Sbjct: 14 LKSWSTKSNEPLSWLNQLRARAIDHVSTQRLPTKRDEEWRFTDISALTRLSFQS-AQPHT 72
Query: 119 SLDVSTDAQF------PSLVLIDGF--------IQNSALNLSNLPDGVYVGSLLGVSDGI 164
+L SLV +DG+ + ++ L + NL + L +
Sbjct: 73 NLQTQDIEHLYLKEAKSSLVFVDGYYSPQLSTHVDSAVLQIGNL------STFLLTQPSV 126
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
++ ++F ++F ++N D +I P + PI+L +++ +
Sbjct: 127 LESHFGQYAKFD-NNVFAALNTAFLRDCALIIAPKNTVIAEPIHLLFIATQSE------- 178
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
PR +++ E G +V +E++V Y NSV E+ + +H +Q +S A
Sbjct: 179 VTCYPRCLIIGEPGSDVTFVEDYVSLR-ETAYVTNSVTEISLSANAHAKHIRIQRESAQA 237
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
H+ AV S Y+ V +S G ++SR+N++VQ + + L+ +Q D H
Sbjct: 238 YHLANCAVSLAHGSNYQSVSISLGAQISRYNLNVQLGDEAAQCTIDGLALISDNQLADTH 297
Query: 345 SRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ +DH P G RQ HKCIV + AVF+G + V
Sbjct: 298 T--CIDHIKPNGISRQQHKCIV-NDKAHAVFNGKIIV 331
>gi|385811470|ref|YP_005847866.1| Fe-S cluster assembly protein SufD [Ignavibacterium album JCM
16511]
gi|383803518|gb|AFH50598.1| Fe-S cluster assembly protein SufD [Ignavibacterium album JCM
16511]
Length = 437
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 26/341 (7%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
I+ +S E SL + ++R + S P+ KDE +++T+ S I
Sbjct: 11 IENFQSFEKSLNGGKTE-----SFHRIRKDALSKFSSIKIPTIKDEEWKYTNISSIIKHN 65
Query: 110 IQPIT-RPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
+ + ++ ++ F L V I+G + L+ LPD V VGSL
Sbjct: 66 FSVVPPKKDTAPEIIGKFLFDKLEHHLLVFINGEFRKDLSRLNELPDRVKVGSLSAAIKN 125
Query: 164 ----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
++K + + +LF ++N D I VP G +E+PI++ +L++ G
Sbjct: 126 NHPVLLKHFGKYAED--SNNLFTALNSAFTKDGAFILVPKGIAIEDPIHIIFLNIAG--- 180
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+K + PR + + EE ++ IIE + + Y +N+V E+ + + V H LQ
Sbjct: 181 -EEKFA-TQPRNLFIAEENSQITIIEHYAS-DDEGIYLSNAVTEIFVCENAVVDHIKLQE 237
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+S A HI V QE +S + +STG + SR+ + G E+ L+ L+ +Q
Sbjct: 238 ESTKAFHIGRMEVDQERSSKFASHLISTGAEFSRNEFTTRFNGEGGESMLNGLFLIKDEQ 297
Query: 340 TQDLHSRLLLDHPRGYCR-QLHKCIVAHSLGQAVFDGNVKV 379
D H+ ++DH + +C H + + VF+G V V
Sbjct: 298 FFDAHT--MIDHAKPHCNSHEHYKGILQDKARGVFNGKVMV 336
>gi|358637797|dbj|BAL25094.1| putative Fe-S assembly protein [Azoarcus sp. KH32C]
Length = 441
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 26/345 (7%)
Query: 44 FSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS 103
F D FV E + LP +S +P +++LR + + P+ +DE +++T +
Sbjct: 13 FVDRFVAAFVER-QSRLPGAS--VPW---IRRLRSEAIERFAELGLPTTRDEDWKYTSVA 66
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSL------VLIDGFIQNSALNLSNLPDGVYVGSL 157
I + +S V +L V +DG + + LP+G ++GSL
Sbjct: 67 GIARRAFDVVVADASLEGVGERVAAYALPGTHRLVFVDGHYVSGLSQVGALPEGAHIGSL 126
Query: 158 LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
S R+++ D F ++N D I + G VE P++L +++
Sbjct: 127 ALASVAHADRLAEIFGGGNAADGFGALNEALWSDGAWIDLAPGVVVEEPVHLLFMT---- 182
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
++ S P +V V +G V +IE VG + Y ++V +V+GK +V H+ L
Sbjct: 183 ---TRSDGASFPHNLVHVGDGASVTMIEHHVGPD-EASYLTDAVTRIVVGKAARVNHTKL 238
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
Q + HI A Q S + + G +L+R + +LG +TEL L VS
Sbjct: 239 QQEGRKGFHIARVAAEQARDSRFGSHAFAFGAQLARSEI-ATRLGEGCDTELVG--LYVS 295
Query: 338 DQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
D + + +DH PRG R+L+K ++ S +AVF+G V V
Sbjct: 296 DGRRHVDHHTFIDHAEPRGTSRELYKGVLDGS-ARAVFNGRVIVR 339
>gi|329901919|ref|ZP_08272987.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
gi|327548918|gb|EGF33540.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
Length = 440
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 150/338 (44%), Gaps = 34/338 (10%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD------TSMIKS--SQIQPI 113
++ +S+P + R ++ LL+ P+ +DE +RFTD T+ + + S+ P+
Sbjct: 14 TAQASIPSWTGALRARGAARFALLA--RPTTRDEEWRFTDLSPFAQTAFVAAPGSKTSPL 71
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
T + ++ D LV +DG I AL++ D + V L + +
Sbjct: 72 TLADIA-GLTVDEAQTRLVFVDG-IYAPALSIRQDDDHLVVADLQTAPARHAHTIEAHLG 129
Query: 174 EFQCGD--LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRV 231
D F + N + V+ VP + P++L ++ ++K + PR
Sbjct: 130 RHASIDTAYFAAQNTASIENAAVVIVPRDSAITAPVHLLFIG-------TQKDVLGFPRA 182
Query: 232 VVLVEEGGEVGIIEEFV------GKEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+++ E G V ++E++V G+E Y+ N+V E+ + +V H LQ +
Sbjct: 183 LIVAEPGSSVTVLEDYVVLNPPGGQEEAHLATYFTNTVTEIALADSARVNHIRLQREGNR 242
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
A H+ AV AS Y V V+ G ++SR NV V G L ++ Q D
Sbjct: 243 ALHVGLCAVSLARASEYTSVSVAFGARISRVNVEVVHHGERAACTLDGLAMIDGRQLADT 302
Query: 344 HSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
H+ +DH P G RQLHKCI S AVF+G V V
Sbjct: 303 HT--FVDHAKPHGISRQLHKCIAGGS-AHAVFNGKVMV 337
>gi|254491895|ref|ZP_05105074.1| FeS assembly protein SufD [Methylophaga thiooxidans DMS010]
gi|224463373|gb|EEF79643.1| FeS assembly protein SufD [Methylophaga thiooxydans DMS010]
Length = 433
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 20/329 (6%)
Query: 62 SSSSSLP--QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS- 118
+++S+LP Q LQ LR + P++K E +++T + +PSS
Sbjct: 15 AANSTLPGAQLDWLQSLRQQARGQFERQGLPAKKVEDWKYTSLWQLSQESFTHDAKPSSV 74
Query: 119 ----SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
S +V+ Q LV++DG L NL G+ + L D ++ I
Sbjct: 75 TKAQSANVALIEQAHRLVIVDGQFSAELSQLDNLETGLTLSPLSTSLDKAENLLNAHIDV 134
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
+ G ++N + ++V A K+E P+ + L + G D+ ++ R +V
Sbjct: 135 EKPG--LNALNTFLMQEGAYLHVAADSKIEKPVEI--LVINSGETDN---LATHLRHLVQ 187
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+E+ E+ +IE +V + N + N V EV + K+ H LQ++SL HI A +Q
Sbjct: 188 LEKNSEITLIEHYVSLQDN-VGFTNVVTEVALADKAKLHHFKLQHESLKHYHIATLASKQ 246
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--P 352
S + +S GGKL+R+++H Q LG ++ L +LL DQ D H+R +DH P
Sbjct: 247 AANSEWNTNNISLGGKLARNDIHSQLLGEESHVTLDGLYLLDGDQHVDNHTR--IDHAVP 304
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+++K ++ AVF+G V V++
Sbjct: 305 HTTSEEVYKGVMDGE-SHAVFNGKVIVHK 332
>gi|292490818|ref|YP_003526257.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
gi|291579413|gb|ADE13870.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
Length = 447
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 153/333 (45%), Gaps = 23/333 (6%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP--S 117
L S QP L++LR + S +P K+E +++T + + P+ +
Sbjct: 18 LESEQVGAVQPW-LRELRQQALGQFQSMGFPGPKNEDWKYTRVRALAETAFTPVVSSPVA 76
Query: 118 SSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI 172
SLD P LV +DG + LP G VGSL +DG+ +
Sbjct: 77 VSLDECQGYFLPDMPCFRLVFVDGRFVPGLSEIEELPQGAVVGSL---ADGLKQEGEGLR 133
Query: 173 SEF-----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
S F F ++N D +Y+PA + P++L +++ G D+ ++
Sbjct: 134 SVFAGYADHHNQPFTALNTAFMADGAYLYLPAKAVLTKPVHLLFITT--GRSDA---VVT 188
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+PR ++++E E+ +IE + G + Y+ N+V EVV+G+G KV H LQ ++ + HI
Sbjct: 189 HPRNLMILEPESELTVIEHYAGL-NDGVYFTNAVTEVVMGRGAKVEHIKLQEEAAKSFHI 247
Query: 288 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 347
V+QE + + ++ GG+L R++++ G L + L ++ D H+R+
Sbjct: 248 ATVQVQQEQDAQFLSRNLALGGRLVRNDINSVLGGEGAGCVLEGLYALNGERHVDNHTRI 307
Query: 348 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
P + +K I+ +AVF+G V V+
Sbjct: 308 DHKQPHTTSEEYYKGILG-GKSRAVFNGKVIVH 339
>gi|383453126|ref|YP_005367115.1| FeS assembly protein SufD [Corallococcus coralloides DSM 2259]
gi|380734435|gb|AFE10437.1| FeS assembly protein SufD [Corallococcus coralloides DSM 2259]
Length = 436
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 144/318 (45%), Gaps = 20/318 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
LQ LR+ + P+ KDE +++T + + S QP+ S+ DV+
Sbjct: 23 LQALREEGLSQFQARGLPTSKDEEWKYTPVATLSSHPFQPVRDVSAGEDVAQAVARLALP 82
Query: 129 -PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--SDGIMKRVSDFISEFQCGDLFWSIN 185
P LV +DG + L+ LP GV + L DG + + + F S+N
Sbjct: 83 GPRLVFVDGRFVPALSVLAGLPRGVVLKPLSQALREDGALLQETLGQRARPSAHAFTSLN 142
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEG-GNVDSKKLPISNPRVVVLVEEGGEVGII 244
+ ++ + E P+ L +L+ G G V +++PR+VV+ EG E ++
Sbjct: 143 AALLEEGALLTLAPRALSEVPVQLLFLARGGDGPV------LASPRIVVVAGEGSEATLV 196
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
E + G G+ + N+V EV +G +RH LQ + A H+ RQ S ++
Sbjct: 197 ETYAGL-GSGATFTNAVTEVSLGDNASLRHFKLQAEGDTALHLGGLYSRQGRDSRFQSHA 255
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKC 362
S GG+LSR+ VH G E L+ L V TQ L +R LDH +C R+L+K
Sbjct: 256 FSFGGQLSRNEVHAAFAGEGGECVLNG--LFVGRGTQHLDNRTDLDHAVPHCSSRELYKG 313
Query: 363 IVAHSLGQAVFDGNVKVN 380
++ + F G ++V
Sbjct: 314 VL-DDRARGTFHGKIRVR 330
>gi|288940481|ref|YP_003442721.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
gi|288895853|gb|ADC61689.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
Length = 433
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 158/343 (46%), Gaps = 25/343 (7%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L LE L + S P P L + R ++ L + P P K E +R+T+ +
Sbjct: 5 LHSGLEHWLSAPDDS-PAPDWLLEHRRAARARLSTQPLPHSKQEAWRYTNLKGLLEQDFT 63
Query: 112 PITRPSSSL---DVST------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
I P S+L D+ T DA +VL++G L LP G +G L D
Sbjct: 64 AIEEPLSALQPEDLDTVLIPGFDAH--RVVLVNGRFAPELSTLGELPAGARIGGLRDWLD 121
Query: 163 GIMKRVSDFI--SEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ + + + + G F +N G D V+++ G +E P+ L +LSV +D
Sbjct: 122 HDPESLRGRLDAARGESGAFFALLNTAGLDDGLVVWLARGVILERPLELIHLSV---GLD 178
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ ++ PR +V +E G + ++E +V G Y N+V+EVV+ + ++H LQ +
Sbjct: 179 EPR--VAQPRHLVHLEAGAQATLVERYVSL-GESLYCTNAVMEVVLERDAVLKHERLQME 235
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
S NA H+ + Q+ S Y V + G + +R +++ + G E L +L Q
Sbjct: 236 SRNAFHLTGFYLVQDENSHYAGVNIGLGARWARTDLNTRFRGEQAECVLHGLYLAGDGQL 295
Query: 341 QDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
D H L ++H CR + K ++ G+AVFDG V V++
Sbjct: 296 LDYH--LDVEHAVPNCRSEENFKGLLTGQ-GRAVFDGRVLVSK 335
>gi|427428786|ref|ZP_18918825.1| Iron-sulfur cluster assembly protein SufD [Caenispirillum salinarum
AK4]
gi|425881449|gb|EKV30136.1| Iron-sulfur cluster assembly protein SufD [Caenispirillum salinarum
AK4]
Length = 450
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 159/343 (46%), Gaps = 28/343 (8%)
Query: 55 SLEDSLPSSSSSLP--QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
+L D+LP + S+LP Q ++ R+ ++ + P+ K E +++T+ + +P
Sbjct: 11 ALSDTLPGAGSALPGGQIAWVRHAREEGAKLWQAHGAPTVKVEQWKYTNLREMLKVPFRP 70
Query: 113 ITRPSSSLDVST---------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
RP+ + + T DA LV ++G +L LP GV V +L + +
Sbjct: 71 -ARPAHEIGLETIPAGDALTLDAHV--LVFVNGHFSAEMSDLDTLPKGVAVSTLATLLET 127
Query: 164 IMKRVSDFISEF-QCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
V FI DL F ++N D V+ V G +E P+++ +S +
Sbjct: 128 EPHAVEPFIGRLADAADLPFAALNQGALEDGFVVRVKTGTALEKPLHIVQVSA------A 181
Query: 222 KKLPISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ P ++ PR VV++E G ++E ++G + N+V E+ + + + H LQN
Sbjct: 182 EDEPTAHQPRNVVVLENGAVATVLESWIGTTSDTPSLRNAVTEIHVAQDAVLTHQILQNL 241
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
A ++ TAV+ E Y+ + GGKLSRH++ V+ G E L+ + + T
Sbjct: 242 PERAYNVAATAVKVEAKGVYDSFVLQVGGKLSRHDLRVELAGRHAECRLNGAY--GASGT 299
Query: 341 QDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q + + +DH P +++K ++A + VF G + V R
Sbjct: 300 QHMDTTSFIDHAVPECTSNEIYKGVLAGK-AKGVFQGKILVRR 341
>gi|345871237|ref|ZP_08823184.1| FeS assembly protein SufD [Thiorhodococcus drewsii AZ1]
gi|343920647|gb|EGV31376.1| FeS assembly protein SufD [Thiorhodococcus drewsii AZ1]
Length = 442
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 142/303 (46%), Gaps = 23/303 (7%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSL-----DVSTDAQFPSL-----VLIDGFIQ 139
P+ K E +R+T +K Q R ++ D + P L +L++G
Sbjct: 45 PNSKTESWRYTS---LKGLMEQDFARAGENMTALQSDDLEEVLIPGLDAYRILLVNGRYL 101
Query: 140 NSALNLSNLPDGVYVG---SLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIY 196
+LP GV V L+ +++ + ++ LF ++N G D V++
Sbjct: 102 PELSAHEDLPSGVRVAGLRDLIANEPDLLRTHLNAVAPPDSQPLFAALNTAGMDDGLVLF 161
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY 256
V G +E PI L +LSV +D + ++ PR +V++E+G + ++E +V G+ Y
Sbjct: 162 VARGVVLERPIELIHLSV---GLDEPR--VAQPRHLVVLEDGAQATLVERYVSL-GDSIY 215
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
NSVLE+ +G+ ++H +Q +S NA HI + Q S Y+ V + G SR ++
Sbjct: 216 CTNSVLELALGRDALLKHDRIQMESPNAFHITGLYLTQSANSHYQGVNIGLGASWSRTDL 275
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 376
+ + G E +L +L Q D H +L P R+ K I+ + G+AVFDG
Sbjct: 276 NCRFQGEHAECDLQGLYLAGDRQLMDYHLDVLHSLPNCSSRETFKGIL-YGRGRAVFDGR 334
Query: 377 VKV 379
V V
Sbjct: 335 VFV 337
>gi|224823958|ref|ZP_03697066.1| FeS assembly protein SufD [Pseudogulbenkiania ferrooxidans 2002]
gi|224603377|gb|EEG09552.1| FeS assembly protein SufD [Pseudogulbenkiania ferrooxidans 2002]
Length = 438
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 157/338 (46%), Gaps = 20/338 (5%)
Query: 53 AESLEDSLPSSSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
A+ D+ +++LP LP L++ R++ +P+ + E +++T + I+ S+
Sbjct: 5 ADFYRDAFARVATTLPGSELPWLRRGREAGLAFFAEAGFPTLRQEDWKYTSVAAIEKSRF 64
Query: 111 QPITRPSSS------LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
P P+++ +D A LV ++G Q N+ LP GV + SL V +
Sbjct: 65 MPPP-PTANGVAPGLIDAWGLAGTQRLVFVNGRYQPRWSNIDPLPGGVTLASLAEVLERD 123
Query: 165 MKRVSDFISEFQCG--DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+R+ + G F ++N D + + AG +E P++L +++ E G
Sbjct: 124 PQRLEGVLGVLPAGYPSGFAALNQAFFSDGVYLDLAAGVALETPVHLLFVTTEAG----- 178
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
L + + R VV E G +IE V G+ Y +N+ ++V+G+ +V H LQ +SL
Sbjct: 179 -LAL-HTRNVVRAEAGSRACLIEHHVAL-GDGAYLSNTATDLVVGQDAEVEHLKLQQESL 235
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
A H+ V Q+ S + + GG L+R ++ V L ++ Q D
Sbjct: 236 KAFHVAALDVDQQQGSRFVSRSFALGGGLARVDIRVGLNAEHAACTLDGLYMTDGRQHSD 295
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
H+R+ P G R+ +K ++A + +AVF+G V V
Sbjct: 296 HHTRIDHARPYGTSREFYKGVLAGA-SRAVFNGRVIVQ 332
>gi|148360747|ref|YP_001251954.1| ABC transporter permease [Legionella pneumophila str. Corby]
gi|296106188|ref|YP_003617888.1| ABC transporter permease [Legionella pneumophila 2300/99 Alcoy]
gi|148282520|gb|ABQ56608.1| ABC transporter, permease component [Legionella pneumophila str.
Corby]
gi|295648089|gb|ADG23936.1| ABC transporter, permease component [Legionella pneumophila 2300/99
Alcoy]
Length = 428
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 158/322 (49%), Gaps = 31/322 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYAD-LVKPYLGKIVEQEHG--FH 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N IY+PAG +E PI LK++ + + R ++L+E+ +
Sbjct: 136 YLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MHLRHLILMEKESQAT 188
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS +
Sbjct: 189 LIEEYQGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSS 247
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLH 360
+S GGKL R ++ V + ++ + Q D H+ ++ H CR Q +
Sbjct: 248 HSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDY 305
Query: 361 KCIV-AHSLGQAVFDGNVKVNR 381
K I+ HS +AVF+G V V +
Sbjct: 306 KGILKGHS--RAVFNGKVIVAK 325
>gi|390949482|ref|YP_006413241.1| Iron-regulated ABC transporter permease protein SufD [Thiocystis
violascens DSM 198]
gi|390426051|gb|AFL73116.1| Iron-regulated ABC transporter permease protein SufD [Thiocystis
violascens DSM 198]
Length = 441
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 16/301 (5%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPSL-----VLIDGFIQNSA 142
P+ K E +R+T + + ++L D + P L VL++G
Sbjct: 45 PTSKTEDWRYTSLKGLLEQGFAQVDEAITALQPDDLEEILIPGLDSHRVVLVNGRYAPEL 104
Query: 143 LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAG 200
L +LP GV +G L + D + D ++ LF ++N G D V
Sbjct: 105 SVLGDLPKGVRLGGLRALLDADPDALRDHLNRIADARQPLFLALNTAGLDDGFVALFDRA 164
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
+E PI L +LSV +D + ++ PR ++++ +G + +IE +V G Y NS
Sbjct: 165 VMLERPIELIHLSV---GLDEPR--VAQPRHLIVLGDGAQATLIERYVSL-GESLYCTNS 218
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
VLE+ +G+ ++H +Q +S NA H+ + Q+ S Y V + G + +R + +
Sbjct: 219 VLEISLGRDAVLQHDRIQMESANAFHLTGLYLGQDANSRYRGVNIGLGARWARTELVTRF 278
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
G E +L +L Q D H + PR R+ K I+ + G+AVFDG V V
Sbjct: 279 CGEQAECDLQGLYLAGDRQLMDYHLDVAHSVPRCTSRENFKGIL-YGKGRAVFDGLVSVA 337
Query: 381 R 381
R
Sbjct: 338 R 338
>gi|347539983|ref|YP_004847408.1| FeS assembly protein SufD [Pseudogulbenkiania sp. NH8B]
gi|345643161|dbj|BAK76994.1| FeS assembly protein SufD [Pseudogulbenkiania sp. NH8B]
Length = 438
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 20/338 (5%)
Query: 53 AESLEDSLPSSSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
A+ D+ +++LP LP L++ R++ +P+ + E +++T + I+ S+
Sbjct: 5 ADFYRDAFARVATTLPGSELPWLRRGREAGLAFFAEAGFPTLRQEDWKYTSVAAIEKSRF 64
Query: 111 QPITRPSSS------LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
P P+++ +D A LV ++G Q N+ LP GV + SL V +
Sbjct: 65 MPPP-PTANGVAPGLIDAWGLAGTQRLVFVNGRYQPRWSNIGPLPAGVTLASLAEVLERD 123
Query: 165 MKRVSDFISEFQCG--DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+R+ + G F ++N D + + AG +E P++L +++ E G
Sbjct: 124 PQRLEGVLGVLPAGYPSGFAALNQAFFSDGVYLDLAAGVALETPVHLLFVTTEAG----- 178
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
L + + R VV E G +IE V G+ Y +N+ ++V+G+ ++ H LQ +SL
Sbjct: 179 -LAL-HTRNVVRAEAGSRACLIEHHVAL-GDGAYLSNTATDLVVGQDAEIEHLKLQQESL 235
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
A H+ V Q+ S + + GG L+R ++ V L ++ Q D
Sbjct: 236 KAFHVAALDVDQQQGSHFISRSFALGGGLARVDIRVGLNAEHAACTLDGLYMTDGRQHSD 295
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
H+R+ P G R+ +K ++A + +AVF+G V V
Sbjct: 296 HHTRIDHARPYGTSREFYKGVLAGA-SRAVFNGRVVVQ 332
>gi|344339048|ref|ZP_08769978.1| FeS assembly protein SufD [Thiocapsa marina 5811]
gi|343800968|gb|EGV18912.1| FeS assembly protein SufD [Thiocapsa marina 5811]
Length = 441
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 24/322 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF--PS 130
L+ R S+ + P K E +R+T + + ++L + + P
Sbjct: 28 LEAQRRSALHQVREQGVPGTKQEAWRYTSLKRLIEQGFARVEDEVTALQLHDIEELLIPG 87
Query: 131 L-----VLIDGFIQNSALNLSNLPDGVYVGSLLGV----SDGIMKRVSDFISEFQCGDLF 181
L V+++G S L +LP GV V L + D + +R++ E Q LF
Sbjct: 88 LDSHRVVMVNGRYTPSLSALGDLPPGVRVTGLRALLASDPDALRERLNGVAGESQ--PLF 145
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N G D V+ + G +E PI L +LSV +D + ++ PR +V + +G +
Sbjct: 146 AALNTAGLDDGLVVLLDRGAVLERPIELIHLSV---GMDEPR--VAQPRHLVALADGAQA 200
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
+IE +V G Y NSVLE+ +G+ ++H +Q +S NA HI + Q+ S Y
Sbjct: 201 SLIERYVSL-GESLYCTNSVLELSLGRDAVLKHDRIQIESPNAFHITGLYLSQDAGSRYV 259
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 359
V V G +R ++ + G E +L +L Q D H + +DH C R+
Sbjct: 260 GVNVGLGAAWARTDLVTRFRGEHAECDLQGLYLAGDRQLMDYH--IDVDHAVPSCSSRET 317
Query: 360 HKCIVAHSLGQAVFDGNVKVNR 381
K I+ + G+AVFDG V V +
Sbjct: 318 FKGIL-YGKGRAVFDGRVVVAK 338
>gi|307609399|emb|CBW98888.1| hypothetical protein LPW_06751 [Legionella pneumophila 130b]
Length = 428
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 27/320 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVSTDAQFP 129
L +L+ + L +P+R DE +++T + P +P+ V D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALK-TVFDDSPVK 80
Query: 130 SLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F +
Sbjct: 81 NLFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYAD-LVKPYLGKIVEQEHG--FHYL 137
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N IY+PAG +E PI LK++ + R ++L+E+ + +I
Sbjct: 138 NTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQATLI 190
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
EE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS +
Sbjct: 191 EEYQGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSSHS 249
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKC 362
+S GGKL R ++ V + ++ + Q D H+ ++ H CR Q +K
Sbjct: 250 LSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDYKG 307
Query: 363 IV-AHSLGQAVFDGNVKVNR 381
I+ HS +AVF+G V V +
Sbjct: 308 ILTGHS--RAVFNGKVIVAK 325
>gi|397666278|ref|YP_006507815.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
gi|395129689|emb|CCD07922.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
Length = 428
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 158/322 (49%), Gaps = 31/322 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L + +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKHSGFPTRYDEEWKYTLVDSLLQQHFVPPDPAVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYAD-LVKPYLGKIVEQEHG--FH 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N IY+PAG +E PI LK++ + R ++L+E+ +
Sbjct: 136 YLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQAT 188
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS +
Sbjct: 189 LIEEYHGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSS 247
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLH 360
+S GGKL R ++ V + ++ + Q D H+ ++ H CR Q +
Sbjct: 248 HSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDY 305
Query: 361 KCIV-AHSLGQAVFDGNVKVNR 381
K I+ HS +AVF+G V V +
Sbjct: 306 KGILKGHS--RAVFNGKVIVAK 325
>gi|390575630|ref|ZP_10255717.1| FeS assembly protein SufD [Burkholderia terrae BS001]
gi|389932429|gb|EIM94470.1| FeS assembly protein SufD [Burkholderia terrae BS001]
Length = 447
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 156/349 (44%), Gaps = 33/349 (9%)
Query: 54 ESLEDSLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
ESL D + + L + LP L+ +R S+ + P+ + E +++T+ S+I
Sbjct: 4 ESL-DHFHEAFAQLAKRLPGAELPWLRAVRRSAFDQFNALGLPTTRHEDWKYTNVSVIGK 62
Query: 108 SQIQPITRPSSSL-------------DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV 154
++ + L +++ D LV ++G ++ LP GV+V
Sbjct: 63 RPWHFASQRTDRLGLIDGSDVQGIVDELALDPAGHRLVFVNGLHAPRLSKVNGLPHGVFV 122
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
GSL + +R+ I+ D F +++ D + +P G ++ P+++ +L+
Sbjct: 123 GSLARALREMPQRLQGTIAAQTYADGFTALSTAFLTDGFAVVLPPGEVIDQPLHMLFLTD 182
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
EGG L + VV+ G V I+E FVG G D YW N+V +V + V+H
Sbjct: 183 EGG------LAVQPFNVVLAGARSGCV-IVEHFVGL-GGDAYWTNAVTRIVADEQADVQH 234
Query: 275 SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHL 334
LQ + A HI A Q+ AS + + G LSR + + + L+ +
Sbjct: 235 YRLQQEGSKAFHIASVAAAQQRASCFTSHAFAFGAALSRTGIDTSLNAANAQATLNGLYF 294
Query: 335 LVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
+ Q D H+R +DH +C R+ ++ ++ + VF+G + V+R
Sbjct: 295 VGGRQHVDHHTR--IDHAAPHCTSREYYRGVL-DGAARGVFNGRIIVHR 340
>gi|54293586|ref|YP_126001.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
gi|53753418|emb|CAH14871.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
Length = 428
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 157/322 (48%), Gaps = 31/322 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYAD-LVKPYLGKIVEQEHG--FH 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N IY+PAG +E PI LK++ + R ++L+E+ +
Sbjct: 136 YLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQAT 188
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS +
Sbjct: 189 LIEEYQGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSS 247
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLH 360
+S GGKL R ++ V + ++ + Q D H+ ++ H CR Q +
Sbjct: 248 HSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDY 305
Query: 361 KCIV-AHSLGQAVFDGNVKVNR 381
K I+ HS +AVF+G V V +
Sbjct: 306 KGILTGHS--RAVFNGKVIVAK 325
>gi|452823290|gb|EME30302.1| ABC transporter, Fe-S cluster assembly protein SufD, transmembrane
[Galdieria sulphuraria]
Length = 540
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 17/302 (5%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPIT-RPSSSLDVS---TDAQFPSLVLIDGFIQNSALNL 145
P RKDE +RFT+ + ++ Q + R + L S D Q +VL+DG N+
Sbjct: 126 PGRKDELWRFTNLRNLFLTRFQTSSHRVDNQLLESLFEKDVQSQRVVLVDGVFDPFLSNI 185
Query: 146 SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG----DLFWSINGMGAPDLGVIYVPAGC 201
SN+PD +++GS+ + + + + + + G ++F +IN D+ ++++P
Sbjct: 186 SNIPDRIFIGSVTELDVERQRWIYELTKKGETGIQETNIFGAINLASFRDITIVWIPQDV 245
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSV 261
+++ I+L S ++S IS+PR+VV+VE G V I++ G G Y N
Sbjct: 246 SLQDYIHLCCYS--SNCLNSSFYGISHPRIVVVVEGGSHVKILQHHFGASGG--YLDNFA 301
Query: 262 LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQL 321
+ IG + + + +A + + E ++ +S+G K+ R + +
Sbjct: 302 TSISIGDSATLEYYIVNECPKDALWLGSLNAQLEQYCTFQFRFLSSGSKVGRLTMTTDLV 361
Query: 322 GPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
G ++ T L + ++T D HS +DH P + QL + +VA Q VF G VK+
Sbjct: 362 GRESNTSLHGLAIANEERTLDFHS--FVDHRVPSCHSEQLQRNLVADR-SQCVFRGLVKI 418
Query: 380 NR 381
R
Sbjct: 419 RR 420
>gi|431931545|ref|YP_007244591.1| FeS assembly protein SufD [Thioflavicoccus mobilis 8321]
gi|431829848|gb|AGA90961.1| FeS assembly protein SufD [Thioflavicoccus mobilis 8321]
Length = 444
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSA 142
P+ K E +R+T + P + + ++ +VL+DG
Sbjct: 46 PTSKHEAWRYTGLKGLIEQGFAPYREATPETNTGELSRHLIDGLESHRVVLVDGRFAAGL 105
Query: 143 LNLSNLPDGVYVGSLLGV----SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP 198
L LP GV + L V D + R++ LF ++N D V+ V
Sbjct: 106 SALDGLPAGVRIAGLGQVLRQDPDAVRGRLAQVAG--TGAHLFAALNTAAMSDGLVVLVE 163
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWA 258
G ++E PI L +L+V + + PR ++ + +G + +IE FVG+ G Y
Sbjct: 164 PGVRLERPIELIHLAV-----GAAGPGVVQPRHLIALGDGAQATLIERFVGR-GGARYCT 217
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 318
N V EV +G+ + H +Q ++ A HI V E AS Y V V G +R ++
Sbjct: 218 NLVAEVTLGRDAGLEHYRVQTEAPEAFHISALHVALEAASRYRGVNVGLGAAWARTDLVA 277
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 376
+ G E +LS +L Q D H L +DH C R+ K I+ H G+AVFDG+
Sbjct: 278 RFAGEGAECDLSGLYLAGDRQLIDYH--LNVDHAVPGCASREHFKGIL-HGKGRAVFDGH 334
Query: 377 VKVNR 381
V V R
Sbjct: 335 VLVAR 339
>gi|378776542|ref|YP_005184979.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|364507356|gb|AEW50880.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 428
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 155/320 (48%), Gaps = 27/320 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVSTDAQFP 129
L +L+ + L +P+R DE +++T + P +P+ V D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKA-VFYDSPVK 80
Query: 130 SLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F +
Sbjct: 81 NLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYAD-LVKPYLGKIVEQEHG--FHYL 137
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N IY+PAG +E PI LK++ + R ++L+E+ + +I
Sbjct: 138 NTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQATLI 190
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
EE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ ++RQ AS +
Sbjct: 191 EEYQGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSIRQSAASQFSSHS 249
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKC 362
+S GGKL R ++ V + ++ + Q D H+ ++ H CR Q +K
Sbjct: 250 LSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDYKG 307
Query: 363 IV-AHSLGQAVFDGNVKVNR 381
I+ HS +AVF+G V V +
Sbjct: 308 ILTGHS--RAVFNGKVIVAK 325
>gi|414876495|tpg|DAA53626.1| TPA: hypothetical protein ZEAMMB73_819224 [Zea mays]
Length = 882
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 81/123 (65%), Gaps = 9/123 (7%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKV-ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
+LF+ N +GA D+ V++VP G V ++ +++ + G ++ + +SNPRV+V+ E+
Sbjct: 45 NLFYDFNAVGARDVVVVHVPEGVNVADDSVHIMFAYTNSG---AEIMLMSNPRVLVVAEK 101
Query: 238 GGEVGIIEE----FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
EV I+EE VG+EG CYWAN V E++I +G +V HSY+Q+QS AAH KWT V+
Sbjct: 102 AAEVAIVEEQEHFGVGEEGG-CYWANPVAEIIIDEGARVVHSYVQHQSFAAAHTKWTVVK 160
Query: 294 QET 296
Q+
Sbjct: 161 QDA 163
>gi|192361506|ref|YP_001981956.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
gi|190687671|gb|ACE85349.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
Length = 434
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 154/322 (47%), Gaps = 22/322 (6%)
Query: 69 QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----SQIQPITRPSSSLD-V 122
Q LP LQ+LR ++ L+ PWP+RK E +++T ++ S Q T ++SLD +
Sbjct: 16 QVLPWLQELRVQAADAWLAQPWPTRKTEHWKYTPLQSLQKDTPQSWGQGETLEAASLDLI 75
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--L 180
DA LV ++G NS L+ S+LP GV S + R ++ G+ L
Sbjct: 76 PLDA--TRLVFVNGVF-NSELS-SSLPAGVVRFSQANSEQQALVR--QYLGRVVEGERHL 129
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGG 239
F ++N + +++VP + E P+YL ++S ++ P S N RV+V++E G
Sbjct: 130 FATLNNAWVNEGVLVHVPRNIQWEKPVYLVHVS------SAQDAPTSANSRVLVVLESGA 183
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
++E+++ + + N++ E+V+G + H L + NA HI + ++
Sbjct: 184 SATLVEQYISTDEIQNSFVNALSELVLGDNASLHHYRLNLEQENALHIGAVHANLQRSAR 243
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 359
++ G +L R + + P E +L +L Q D H+ + P ++
Sbjct: 244 LRAFTLALGSRLQRIDYQLNHRAPGAELDLQGLYLPRHQQLVDYHTTINHWVPNCTSNEI 303
Query: 360 HKCIVAHSLGQAVFDGNVKVNR 381
+ IV S QAVF+G + +++
Sbjct: 304 FRGIVGDS-AQAVFNGRIYIHQ 324
>gi|223936151|ref|ZP_03628065.1| FeS assembly protein SufD [bacterium Ellin514]
gi|223895373|gb|EEF61820.1| FeS assembly protein SufD [bacterium Ellin514]
Length = 449
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 149/340 (43%), Gaps = 25/340 (7%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
+S + + P L +R +S +P+ KDE +RFT+ I +P+
Sbjct: 12 DSFWEKFERLEKEIKNPSWLFPIRKASIARFAELGFPTLKDEDWRFTNVGPITKLPFKPV 71
Query: 114 -TRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
T SL+ + QF LV ++G ++ DG+ VGSL +
Sbjct: 72 FTYSKESLNEAAINQFAFTSLKSSKLVFVNGHFSKELSHILPQKDGIKVGSLAAALEADS 131
Query: 166 KRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ + + G F ++N D I+VPAG +E P++L + V + K
Sbjct: 132 ALLEKHLGRYVKPEGTAFSALNTAFFHDGAFIHVPAGKVIEEPVHLLF-------VTTSK 184
Query: 224 LPIS--NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
P + +PR +++ E G + +IE +V + Y+ N V E+VIG+ V H Q++S
Sbjct: 185 EPGTTVHPRNLIIAERGSQATVIESYVSTV-DGPYFTNVVSEMVIGEDAVVEHCKFQDES 243
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
A HI V+ + ++ G KLSR+N+ E L+ +L +Q
Sbjct: 244 PEAFHIAAVNVQLGKGCNFIAHSIALGAKLSRNNIWTNLDAERVECVLNGLYLTKDEQLA 303
Query: 342 DLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
D H ++++H + +C + + I+A + VF G + V
Sbjct: 304 DNH--MIVEHAKPHCNSHEYYNGILA-GKSRGVFHGRILV 340
>gi|397663169|ref|YP_006504707.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
gi|395126580|emb|CCD04763.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
Length = 428
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 153/322 (47%), Gaps = 31/322 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP GV + +L+ +D + + + + F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPQGVLILPLSLALIHYADLVKPHLGKIVEQEHG---FH 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N IY+PAG +E PI LK++ + R ++L+E+ +
Sbjct: 136 YLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------VYLRHLILMEKESQAT 188
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS +
Sbjct: 189 LIEEYHGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSS 247
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLH 360
+S GGKL R ++ V + ++ + Q D H+ ++ H CR Q +
Sbjct: 248 HSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDY 305
Query: 361 KCIV-AHSLGQAVFDGNVKVNR 381
K I+ HS +AVF+G V V +
Sbjct: 306 KGILKGHS--RAVFNGKVIVAK 325
>gi|420251173|ref|ZP_14754360.1| FeS assembly protein SufD [Burkholderia sp. BT03]
gi|398058522|gb|EJL50415.1| FeS assembly protein SufD [Burkholderia sp. BT03]
Length = 447
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 33/349 (9%)
Query: 54 ESLEDSLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
ESL D + + L + LP L+ +R S+ + P+ + E +++T+ S+I
Sbjct: 4 ESL-DHFHEAFAQLAKRLPGAELPWLRAVRRSAFDQFNALGLPTTRHEDWKYTNVSVIGK 62
Query: 108 SQIQPITRPSSSL-------------DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV 154
++ + L +++ D LV ++G ++ LP GV+V
Sbjct: 63 RPWHFASQRTDRLGLIDGSDVQGIVDELALDPAGHRLVFVNGLHAPRLSKVNGLPHGVFV 122
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
GSL + +R+ I+ D F +++ D + +P G ++ P+++ +L+
Sbjct: 123 GSLARALREMPQRLQGTIAARTYTDGFTALSTAFLTDGFAVVLPPGEVIDQPLHMLFLTD 182
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
EGG L + VV+ G V I+E FVG G D YW N+V +V + V+H
Sbjct: 183 EGG------LAVQPFNVVLAGARSGCV-IVEHFVGL-GGDAYWTNAVTRIVADEQADVQH 234
Query: 275 SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHL 334
LQ + A HI A Q+ AS + + G +SR + + + L+ +
Sbjct: 235 YRLQQEGSKAFHIASVAAAQQRASCFTSHAFAFGAAISRTGIGTSLNAANAQATLNGLYF 294
Query: 335 LVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
+ Q D H+R +DH +C R+ ++ ++ + VF+G + V+R
Sbjct: 295 VGGRQHVDHHTR--IDHAAPHCTSREYYRGVL-DGAARGVFNGRIIVHR 340
>gi|116626729|ref|YP_828885.1| iron ABC transporter permease [Candidatus Solibacter usitatus
Ellin6076]
gi|116229891|gb|ABJ88600.1| Iron-regulated ABC transporter permease protein SufD [Candidatus
Solibacter usitatus Ellin6076]
Length = 420
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 29/319 (9%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR----PSSSLDVSTD 125
P LQ LRD++ + +P+ +E +RFT+ I PI R P + +V+T
Sbjct: 22 PAWLQPLRDNAFRRFAELGFPTIHNEEWRFTN--------IAPIARTKFAPGRTGEVATK 73
Query: 126 -AQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A+ P LV +G + LP G+ G I K + + S + + F +
Sbjct: 74 LAKGPIQLVFANGHLLTRP---ETLPAGLQAGGFADDPAAIEKHLGKYASFDE--NAFVA 128
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVG 242
+N D +I V G + PI L YL+ + PI ++PR ++L+ E +
Sbjct: 129 LNTAMTQDGALIRVARGAVIAEPIELFYLT------STAATPIATHPRALILIGENAQCS 182
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
I+E + G G Y+ N+V E+V+G+G V H +Q ++L A H+ +S +
Sbjct: 183 IVERYQGA-GEGAYFTNAVTEIVVGEGAVVDHYKVQQETLAAYHVSTIQAELGRSSVFAS 241
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
++ GG L R++ + L +E L+ +++ Q D H+ + P +L+K
Sbjct: 242 HSIALGGALVRNDANC-TLSEGSEGTLNGLYIVNGTQHVDNHTAIDHRQPHANSHELYKG 300
Query: 363 IVAHSLGQAVFDGNVKVNR 381
I+ AVF+G + V +
Sbjct: 301 IL-DGKSHAVFNGKIFVRK 318
>gi|430761125|ref|YP_007216982.1| Iron-sulfur cluster assembly protein SufD [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010749|gb|AGA33501.1| Iron-sulfur cluster assembly protein SufD [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 447
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 148/344 (43%), Gaps = 25/344 (7%)
Query: 52 LAESLEDSLPSSSSSLPQPLP--LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
L++ D + LP+ +P L R ++ +P + E +++T+ I +
Sbjct: 6 LSKHYADQVQHLQEVLPEGMPEWLAGRRRGAAVRFAEAGFPDPRMEEWKYTNVRPIAT-- 63
Query: 110 IQPITRPSSSLDVSTDA---------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
+P + +VS D +V +DG ++ +LS LP+G V L
Sbjct: 64 -KPFVAAAGDAEVSADTVRALGFGGLDAYRMVFVDGRLRRDLSDLSELPEGAVVQGLGEA 122
Query: 161 SDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ F++ F ++N D ++ + G ++E P++L L G
Sbjct: 123 LATDPDPLEPFLATLAHDRFSSFAALNTAFMNDGALVRLAQGIRLERPLHLLMLGSAG-- 180
Query: 219 VDSKKLPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
PI S+PRV++ EG E +IE + G + + N+V E+ G +VRH L
Sbjct: 181 ----DTPIWSHPRVLIQAGEGAEATVIEHYADLPGANGF-TNTVTELRAEAGARVRHYLL 235
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
Q+ + A H+ V+Q S V+ GG+L RH+++V P E EL L
Sbjct: 236 QDHADGAYHVGSVFVQQRRDSRVTSHNVNLGGRLVRHDLNVDLTEPGAEIELLGLFLAGG 295
Query: 338 DQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q D H+R+ P R+ ++ I G+ VF G V V++
Sbjct: 296 RQHVDTHTRVHHLSPNTTSRERYRGI-GQGHGRGVFKGRVLVDQ 338
>gi|392377260|ref|YP_004984419.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum brasilense Sp245]
gi|356878741|emb|CCC99631.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum brasilense Sp245]
Length = 451
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 160/350 (45%), Gaps = 33/350 (9%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
+ PF+ Q + ++D LP + S L LR + P+ K+E +R+T+
Sbjct: 18 AKPFLEQF-DRVKDGLPGAGLSW-----LNDLRSQGHHRFAALGLPTVKNESWRYTNLRA 71
Query: 105 IKSSQIQPITRPSSSL------DVSTDAQF-PSLVLIDGFIQNSALNLSNLPDGVYVGSL 157
+ QP ++ V TD P LV +DG + + + LP GV L
Sbjct: 72 LDKLAFQPAAGTGDTVRFDVLPTVRTDGTTGPRLVFVDGRFRAELSSTAGLPAGV---EL 128
Query: 158 LGVSDGIMKR---VSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYL 212
L ++D + ++ V++ + D ++N D V++VP G VE I L ++
Sbjct: 129 LNLADALARKPDLVAEHLGRIAAPDDQPLVALNTAFLADGPVLHVPRGVTVEETIELVFV 188
Query: 213 SVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGK 271
SV S+ P + +PR +++ E I+E VG G+ +N V EV +G+G
Sbjct: 189 SV-----GSEAQPTAFHPRGLIVAEAESRAVIVEHHVGL-GSCTTLSNGVTEVFVGEGAL 242
Query: 272 VRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSS 331
V H +Q + + H+ TA + Y+ ++ G KLSR+ V+ G + +T +S
Sbjct: 243 VHHYKVQREHAESFHLSHTAAKVAGKGVYDNFILTIGAKLSRNEVNSVLDGEEGDTHVSG 302
Query: 332 FHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+++ Q D + +DH + C R+++K ++ +AVF G + V
Sbjct: 303 AYMVRGGQHVD--TTTFIDHAKPCCTSREVYKGVI-DDQARAVFQGKIIV 349
>gi|52840840|ref|YP_094639.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54296623|ref|YP_122992.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
gi|52627951|gb|AAU26692.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750408|emb|CAH11802.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
Length = 428
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 154/322 (47%), Gaps = 31/322 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVPPDPTVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP GV + +L+ +D + + I E + G F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPQGVLILPLSLALIHYADLVKPHLGK-IMEQEHG--FH 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N IY+P G +E PI LK++ + R ++L+E+ +
Sbjct: 136 YLNTAMLQCGVFIYIPEGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQAT 188
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ AS +
Sbjct: 189 LIEEYHGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSAASQFSS 247
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLH 360
+S GGKL R ++ V + ++ + Q D H+ ++ H CR Q +
Sbjct: 248 HSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHT--VVHHLVPNCRSDQDY 305
Query: 361 KCIV-AHSLGQAVFDGNVKVNR 381
K I+ HS +AVF+G V V +
Sbjct: 306 KGILKGHS--RAVFNGKVIVAK 325
>gi|42521820|ref|NP_967200.1| transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
gi|39574350|emb|CAE77854.1| Transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
Length = 419
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 158/331 (47%), Gaps = 39/331 (11%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSS 118
S S P L R + L+ P+RKDE + +T + S + P+
Sbjct: 11 SQSNPADGALSAFRKAGYDYALNKGLPTRKDEDWHYTSVKTLNEGTFLPSAVNPVEPSHE 70
Query: 119 SL---DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
+L + + +F ++V +G + N L+ ++LP GV +K +S + ++F
Sbjct: 71 TLVEIKKNLNPEFANIVFFNGVL-NKTLS-ADLPAGVS-----------LKELSQYPAQF 117
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPI-YLKYLSVEGGNVDSKKLP--ISNPRVV 232
D F ++NG ++ V VE P+ ++ + S EGG P + NPR+
Sbjct: 118 D--DTFDALNGAYMAKPFLVTVAKETSVEKPVNFVFFTSAEGG-------PSLMVNPRLS 168
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
+ V V ++E GK G Y+ANSV +V +G+ K+ + +Q +S +A +I T +
Sbjct: 169 LDVGARSSVRVLESHYGKAGT-TYFANSVSDVHVGESAKLVYVRVQAESESAVNIGRTRL 227
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
E + E + +TG +LSRH++ V GP + TE+ + + +Q D S L++H
Sbjct: 228 VVEKDANVESLAFATGARLSRHSLDVILNGPGSNTEILGVYAVRGNQHVDNTS--LINHK 285
Query: 353 RGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
G C QL+K I+ +AVF G V++ +
Sbjct: 286 VGECNTNQLYKGIL-DGESRAVFCGTVRIEK 315
>gi|392375425|ref|YP_003207258.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Methylomirabilis oxyfera]
gi|258593118|emb|CBE69429.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Methylomirabilis oxyfera]
Length = 480
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 153/350 (43%), Gaps = 43/350 (12%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS------ 123
P Q++R ++ + +P+ + E +++T+ + I ++ + + +L +
Sbjct: 27 PQWTQQIRTAAFGRFIELGFPTTRLEDWKYTNVAPIITTAFRRAGQAQRTLPIEPIESFT 86
Query: 124 -TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC--GDL 180
D LV ++G + +L LP GV V +L V V +++
Sbjct: 87 LEDVACAQLVFVNGCYSSDLSSLKKLPAGVVVSNLATVLACNPASVKPHLAQHAGFHNQA 146
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS--------------------------- 213
F ++N D +++P G V+ PI+L ++S
Sbjct: 147 FVALNTAFMEDGAFVFIPKGTVVDAPIHLLFVSSSPCDSALGRPPSTEFGAGFESPVPAG 206
Query: 214 VEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+GG D + +S PR +++VE +V +IE +VG G+D Y N+V E+V G+ +
Sbjct: 207 FQGGADDKSSVASVSYPRNLIVVESHSQVRVIESYVGM-GHDVYCTNAVTEIVGGENAVI 265
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 332
+ +Q +S A H+ V+ + + GG L R+N+ V G E L+
Sbjct: 266 DYYKVQRESEEAFHVATAQVQLGRGGTFSSHTIDLGGALVRNNLGVALDGDGAECTLNGL 325
Query: 333 HLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVN 380
+ Q D H+R +DH R +C RQL+K I+ + VF+G V V+
Sbjct: 326 SMATGRQHVDNHTR--IDHIRPHCSSRQLYKGIL-DGKSRGVFNGKVVVH 372
>gi|374370072|ref|ZP_09628085.1| FeS assembly protein SufD [Cupriavidus basilensis OR16]
gi|373098374|gb|EHP39482.1| FeS assembly protein SufD [Cupriavidus basilensis OR16]
Length = 444
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 29/324 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L + R + + +P+ + E +++T + I+ S+ P++S D A +
Sbjct: 28 LARARKQALECFAQAGFPTLRHEDWKYTSVAAIEKSRF--TAGPAASGDKPDAALLAARL 85
Query: 131 ----------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF----ISEFQ 176
+V ++G Q + LP G + SL + + + V +SE
Sbjct: 86 ETLALPGAYLMVFVNGRHQPQWSRIGALPAGAELLSLATMMECTPEPVEALLCRPVSELP 145
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
G F ++N D I + AG + PI+L +++ E +L +++ R +V+ E
Sbjct: 146 SG--FAALNTAFMADGAYIRLAAGTAPDMPIHLLFIATE------PEL-VTHTRNLVMAE 196
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
EG V I+E VG +G Y+ NSV ++V + V H +Q +SL A HI + Q
Sbjct: 197 EGSRVCIVEHHVGVDGL-AYFTNSVTDIVAARDAHVEHHKVQQESLKAFHIAGVNMDQRH 255
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
S + + GG L+R ++ V E L ++ Q D H+R+ P+G
Sbjct: 256 GSRFTSSAFALGGALARADIQVGLNAERAECSLDGLYMTGGRQHIDHHTRVDHARPQGKS 315
Query: 357 RQLHKCIVAHSLGQAVFDGNVKVN 380
R+ +K +++ + +AVF+G V V+
Sbjct: 316 REFYKGVLSGA-SRAVFNGKVVVH 338
>gi|226228435|ref|YP_002762541.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
gi|226091626|dbj|BAH40071.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
Length = 438
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 153/329 (46%), Gaps = 19/329 (5%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ--IQPITRPSSSL 120
++S P L+ LR + ++ S +P+ ++E + +T+ S I S+Q + +S++
Sbjct: 13 AASVADAPGSLKALRTAGAEAFKSLGFPTTREEDWHYTNVSAIASAQFDVAADRTAASAV 72
Query: 121 DVSTDAQF------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
DV+ A + P +V ++G + + LPDGV V L + + +S F+
Sbjct: 73 DVAALAPYTFGGTWPLIVFVNGRFSAALSSFGALPDGVRVMPLTQAAIDEPELLSRFLGT 132
Query: 175 FQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIY-LKYLSVEGGNVDSKKLPISNPRV 231
D F ++N A + ++++ + P++ L + G NV +S+PR
Sbjct: 133 AVTPSRDGFSALNAAFAGEGMLVHIAKEMVSDTPVHILHVVDAAGANV------MSHPRH 186
Query: 232 VVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 291
V++ E + ++E +VG + Y+ N+V+EV + G ++ +Q +S +A H+
Sbjct: 187 VLIAERHAKASVVESYVGL-ADVPYFTNAVVEVFVEDGATLQLVRIQRESRSAQHVGTVE 245
Query: 292 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 351
RQ S + TG LSR N++ G ++ ++L Q D +R+
Sbjct: 246 ARQGRDSHFFAFTFQTGAALSRSNIYTVLAGEGCGCTINGLYMLGGQQHGDHQTRVEHVA 305
Query: 352 PRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
P + R+ +K ++ VF+G V V+
Sbjct: 306 PNCFSREQYKGLL-DERSHGVFNGKVYVH 333
>gi|407716313|ref|YP_006837593.1| iron-regulated ABC transporter permease protein SufD
[Cycloclasticus sp. P1]
gi|407256649|gb|AFT67090.1| Iron-regulated ABC transporter permease protein SufD
[Cycloclasticus sp. P1]
Length = 443
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 28/320 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L LR +++ ++ +P+ ++E +R+T+ + I+ +Q T P + V D+ F
Sbjct: 30 LANLRKQAAEQFSASGFPTFREEEWRYTNITPIEKNQF---TLPDVAGQV--DSAFVDSV 84
Query: 131 -------LVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGDL 180
+V +DGF Q +L ++P+GV V +L L ++ ++K + D + E
Sbjct: 85 LLDDCHHIVFVDGFYQAELSSLKDIPNGVIVSALSDGLVDNEALIKSLLDSVVETPALG- 143
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F + N D +I + V+ PI + ++S + G L +SN R ++L + +
Sbjct: 144 FINFNTALFSDGALICIEENTVVDKPIQVAFISSKQG-----ALTLSNTRNLILAQASSK 198
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
IIE + + + CY N V EVV+ + H LQ++S +A HI R E + +
Sbjct: 199 AQIIETYHAVD-DSCYLTNVVSEVVVEPNANLSHHRLQSESTSAYHIGGVYSRLEKNAIF 257
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ G +SR H LG ++ + ++ Q D H+RL P + +
Sbjct: 258 NQNSYTFGASISRTEAHA-TLGEASDCTMDGLYVGQDRQHMDQHTRLNHAQPHAVSNEFY 316
Query: 361 KCIVA-HSLGQAVFDGNVKV 379
K I+ HS G VF G + V
Sbjct: 317 KGILGDHSTG--VFQGRIIV 334
>gi|350561305|ref|ZP_08930144.1| FeS assembly protein SufD [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349781412|gb|EGZ35720.1| FeS assembly protein SufD [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 447
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 23/343 (6%)
Query: 52 LAESLEDSLPSSSSSLPQPLP--LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
L++ D + LP+ LP L R ++ +P + E +++T+ I +
Sbjct: 6 LSQHYADQVQHLQEILPEGLPEWLAGRRRGAAVRFAEAGFPDPRMEEWKYTNVRPIAT-- 63
Query: 110 IQPITRPSSSLDVSTDA----QFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
+P + DVS D F L V +DG ++ NL+ LP+G V L
Sbjct: 64 -KPFVAAAGDADVSADTVRALGFDGLDAYRMVFVDGRLRRDLSNLAGLPEGAVVQGLGEA 122
Query: 161 SDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ F++ F ++N D V+ + G ++E P++L L G
Sbjct: 123 LATDPDPLEPFLATLAHDRFSSFAALNTAFMNDGAVVRLAPGVRLERPLHLLLLGSAG-- 180
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
D+ S+PRV++ EG E +IE + G + + N+V E+ G +VRH LQ
Sbjct: 181 -DAPTW--SHPRVLIQAGEGAEATVIEHYADLPGANGF-TNTVTELRAEAGARVRHYLLQ 236
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
+ + A H+ V+Q S V+ GG+L RH+++V P E EL L
Sbjct: 237 DHADGAYHVGSVFVQQRRDSRVTSHNVNLGGRLVRHDLNVDLTEPGAEIELLGLFLAGGR 296
Query: 339 QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q D H+R+ P R+ ++ I G+ VF G V V++
Sbjct: 297 QHVDTHTRVHHLSPHTTSRERYRGI-GQGHGRGVFKGRVLVDQ 338
>gi|344345304|ref|ZP_08776158.1| FeS assembly protein SufD [Marichromatium purpuratum 984]
gi|343803133|gb|EGV21045.1| FeS assembly protein SufD [Marichromatium purpuratum 984]
Length = 431
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 13/253 (5%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSL--LGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
+VL++G L LP+GV + SL L D + R LF ++N G
Sbjct: 83 VVLVNGRYAPEHGRLGALPEGVRIDSLARLLAEDPEVVRPHLGALADDPAALFPALNAAG 142
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D V+ + G ++E P+ L +++ ++ ++ PR ++++ EG E ++E +V
Sbjct: 143 GADGLVLLLAPGARLERPLELLHVTT------GERPTLAQPRHLIVLGEGAEARLVERYV 196
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
G E + + N+VLE+ + ++ H +Q+ S + H+ +RQ+ S Y+ + + G
Sbjct: 197 GAEPSIAHATNAVLEIDLAAAARLDHECIQHDSPESFHLSTLYLRQQARSRYQGLNIGLG 256
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAH 366
G+ +R +++ + GP E L +L Q D H L +DH C +L K I+ +
Sbjct: 257 GRWARTDINTRFAGPGGECVLHGLYLSGDGQLIDYH--LDVDHAVPDCTSVELFKGIL-Y 313
Query: 367 SLGQAVFDGNVKV 379
G+AVFDG V V
Sbjct: 314 GQGRAVFDGRVFV 326
>gi|296136902|ref|YP_003644144.1| FeS assembly protein SufD [Thiomonas intermedia K12]
gi|295797024|gb|ADG31814.1| FeS assembly protein SufD [Thiomonas intermedia K12]
Length = 439
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 22/322 (6%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD------- 121
+P + + R + + LL + P+R E +++T + + + +T PS+ L+
Sbjct: 21 EPARVAQARRQALEALLRSGLPTRHSEDWKYTSLRALDAMDL-AVTAPSARLNEEALRAA 79
Query: 122 ---VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
+ DA P LV +DG L++LP GV + + G
Sbjct: 80 GALLVGDA--PRLVFVDGAFDAELSRLNDLPPGVSLAPWGARQSPSATGAGTVLDAAAPG 137
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F +IN M A D + + AG ++ PI + + G S+ R + + +G
Sbjct: 138 GAFDAINRMFARDGMALELGAGVCLDAPIVVVMVQTRAGA--------SHVRHALRLGQG 189
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+IE+ +G Y A+SV + +G K++H LQ++S A H+ Q S
Sbjct: 190 SSARVIEQHLGLAQVGPYLASSVTRAELARGAKLQHVRLQDESDAAVHVSQLHAAQGEDS 249
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
+ + G +LSR H+ P T+L +L +Q D+H + HPRG R
Sbjct: 250 QLDAQILVLGSRLSRQEFHIAHAAPGCHTDLRGVSVLAGEQHGDVHMGIDHRHPRGTSRT 309
Query: 359 LHKCIVAHSLGQAVFDGNVKVN 380
+ + + + VF G V V+
Sbjct: 310 VVRGVFDDA-AHGVFTGRVNVH 330
>gi|116695455|ref|YP_841031.1| iron sulfur cluster assembly protein SufD [Ralstonia eutropha H16]
gi|113529954|emb|CAJ96301.1| iron sulfur cluster assembly protein (SufD),ABC-type transporter
involved in Fe-S cluster assembly,Fe-S family [Ralstonia
eutropha H16]
Length = 443
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 32/309 (10%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSLDVSTDAQFPSL--------VLIDGFIQ 139
+P+ + E +++T + ++ S+ + + S D + AQ +L V ++G Q
Sbjct: 44 FPTLRHEDWKYTSVAALERSRFAVALPQAGDSPDPAVAAQIEALALAGAQLMVFVNGTHQ 103
Query: 140 NSALNLSNLPDGVYVGSLLGVSDG--------IMKRVSDFISEFQCGDLFWSINGMGAPD 191
+ LP G+ + SL + ++ R SD+ S F ++ + +G
Sbjct: 104 PQWSRIGTLPAGIELASLAATLERAPDCLEALLLCRTSDYPSGFAALNMAFMTDG----- 158
Query: 192 LGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKE 251
I V AG E PI+L +L+ + +L ++ R +V+ + G +V I+E G +
Sbjct: 159 -AYIRVAAGTVPEQPIHLLFLAT------AAELA-THARNLVVAQAGSQVCIVEHHAGLD 210
Query: 252 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
G Y N++ ++V + +V H LQ +SL A HI + Q S + GG L
Sbjct: 211 GL-AYCTNTITDIVAERDAQVEHHKLQQESLKAFHIAGVNLDQRQGSRCASSSFALGGAL 269
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 371
+R +++V TE L ++ Q D H+R+ P R+L+K ++A + +A
Sbjct: 270 ARVDINVGLNAEHTECSLDGLYMTAGRQHVDHHTRVDHASPHSKSRELYKGVLAGA-SRA 328
Query: 372 VFDGNVKVN 380
VF+G V V+
Sbjct: 329 VFNGKVVVH 337
>gi|300113348|ref|YP_003759923.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
gi|299539285|gb|ADJ27602.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
Length = 446
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 154/333 (46%), Gaps = 31/333 (9%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV 122
+ S+LP L++LR + +S +P K E +++T + + S ++ +
Sbjct: 23 AGSNLPW---LRELRQQALARFISLGFPGPKHEDWKYTRVRTLAETAFTSAVSSSIAVSL 79
Query: 123 STD-----AQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD-------GIMKRV 168
A+ P LV +DG +++LP G VG+L G++
Sbjct: 80 EQCQRYFLAETPCFRLVFVDGGFAPGLSEVADLPAGAVVGNLASCFKQQAESLRGVLASY 139
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+D+ ++ F ++N D +Y+P + P++L +L+ K +++
Sbjct: 140 ADYQNQ-----PFTALNTAFMADGAYLYLPPRTVLTKPVHLIFLTT-----GRSKAVVTH 189
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
PR ++++E E+ +IE G ND Y+ N+V E+V+GKG V H LQ +S + HI
Sbjct: 190 PRNLIVLEPESELTVIEHHAGL--NDAVYFTNTVTEIVVGKGASVEHIKLQEESAKSFHI 247
Query: 288 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 347
V+QE + + ++ GG+L+R++++ G L + L + D H+R+
Sbjct: 248 ATVQVQQEQDAQFLSRNLALGGRLARNDINSVLAGEGAGCILEGLYALDGVRHVDNHTRV 307
Query: 348 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
P ++ +K I+ +AVF+G V V+
Sbjct: 308 DHQQPHTTSQEFYKGIL-EGKSRAVFNGKVIVH 339
>gi|339322817|ref|YP_004681711.1| iron sulfur cluster assembly protein SufD [Cupriavidus necator N-1]
gi|338169425|gb|AEI80479.1| iron sulfur cluster assembly protein SufD [Cupriavidus necator N-1]
Length = 447
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 143/325 (44%), Gaps = 28/325 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSLDVSTDAQFPSL 131
L R + + +P+ + E +++T + ++ S+ + + LD + AQ +L
Sbjct: 28 LAHARRQALEYFAQAGFPTLRQEDWKYTSVAALERSRFAVALPQGGDGLDGAVAAQIEAL 87
Query: 132 --------VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG--------IMKRVSDFISEF 175
V ++G Q + LP G + SL + +++R S++ S F
Sbjct: 88 ALAGAHLMVFVNGVHQPQWSRIGALPAGTELASLAATLERAPDCLEALLVRRTSEYPSGF 147
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
G F ++N D I V AG E PI+L +L+ G ++ R +V+
Sbjct: 148 ASG--FAALNMALMTDGAYIRVAAGTVPEQPIHLLFLATAGELA-------THARNLVVA 198
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
+ G +V I+E G +G Y N++ ++V + +V H LQ +SL A HI + Q
Sbjct: 199 QAGSQVCIVEHHAGLDGL-AYCTNTITDIVAERDAQVEHHKLQQESLKAFHIAGVNLDQR 257
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S + G L+R ++ V T+ L ++ Q D H+R+ P
Sbjct: 258 HGSRVASSSFALGAALARVDIEVGLNAEHTDCSLDGLYMTGGRQHIDHHTRIDHASPHSK 317
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKVN 380
R+ +K ++A + +AVF+G V V+
Sbjct: 318 SREFYKGVLAGA-SRAVFNGKVVVH 341
>gi|326334712|ref|ZP_08200919.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693162|gb|EGD35094.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 433
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 146/322 (45%), Gaps = 25/322 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P++K E + +T + ++++ QP+ + ++ L
Sbjct: 21 LKDIRKEAFSFFAEKGFPNKKVEAWEYTSLTELQATDYHLWQPVNKKTTLLPEVLYKYAI 80
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCGDL 180
A LV ++G+ +S ++ L GV V SLL + + K FI ++ + GD+
Sbjct: 81 ADCYQLVFVNGYY-SSEMSSKELT-GVTVTSLL---EALHKGGEAFIQKYFNANTEKGDI 135
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F +IN A + I VP G VE PI L Y + D K+ PR +++V E +
Sbjct: 136 FTAINTAFASEGVYIEVPKGKVVEKPIQLLYFN------DRKETTCYQPRNIIVVGENAQ 189
Query: 241 VGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ +IE + N+V EV + K + + LQN SL A+ I T + QE S
Sbjct: 190 LKVIEMHQNLSDAATAILTNAVTEVFVAKNAFLDYYKLQNDSLTASLIDNTYISQEANSH 249
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 359
+ S GG L+R+N++ G E+ L +L Q D ++ + HP Q
Sbjct: 250 ANVHTFSFGGTLTRNNLNFYHQGEYLESTLKGLSILKGTQHTDHYTLVNHAHPNCESHQD 309
Query: 360 HKCIVAHSLGQAVFDGNVKVNR 381
+K IV VF+G + V +
Sbjct: 310 YKSIVNEE-ATNVFNGKIMVEQ 330
>gi|88811717|ref|ZP_01126971.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
gi|88791108|gb|EAR22221.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
Length = 443
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 147/328 (44%), Gaps = 20/328 (6%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS-- 119
+ S+ P L +LR + + +P RK E +R TD + + P + P
Sbjct: 17 AHSAHQDAPEWLARLRQHGIECFEAQGFPGRKVEAWRKTDLTPVLREHFVPASGPGQMGP 76
Query: 120 ---LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ 176
V Q LV +DG+ ++ LP+G+ + L + + + + + F
Sbjct: 77 ELLEKVGVLGQVHRLVFVDGWFDPGLSDVDKLPNGLTLAPLSEYGERLPAVIQEALGGFV 136
Query: 177 CGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
+ F ++N D +++V G VE P+ + +L D + + PR V++
Sbjct: 137 DTETHPFTALNTAFFRDGAIMHVARGATVEQPVVVVHLLTP--EADRRAV---YPRTVLV 191
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANS-VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
EE +V +IE+FVG ++ + N V E+V +G V + +Q + +AH+ AV
Sbjct: 192 AEEASQVTLIEQFVG--ADEPFALNCPVTEIVARQGANVDYYKVQEEGAGSAHLG--AVH 247
Query: 294 QET--ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 351
ET + + ++ G KL+R +++ +GP + L+ +L Q D H+ +
Sbjct: 248 AETFRDATVHIHSLACGAKLARTDIYANLIGPGADVTLNGLYLTTGRQYCDHHTWVNHKA 307
Query: 352 PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
G RQ+ K ++ + VFDG VKV
Sbjct: 308 EHGTSRQVFKGVL-QGRSETVFDGLVKV 334
>gi|108803021|ref|YP_642958.1| Iron-regulated ABC transporter permease SufD [Rubrobacter
xylanophilus DSM 9941]
gi|108764264|gb|ABG03146.1| Iron-regulated ABC transporter permease protein SufD [Rubrobacter
xylanophilus DSM 9941]
Length = 453
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 37/333 (11%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF 128
+P L++ R ++ +T P P+ +DE +R+TD S ++ + P + S DV +
Sbjct: 29 EPGWLREKRLAAWRTFEEIPMPTMRDEAWRYTDVSDVRFEEYVPY---APSPDVEREGDL 85
Query: 129 PSLV--LIDGFIQNSALNLSNLPDGVYV---------GSLLGVSDGIMKRVSDFISEF-- 175
P V LI +NSAL + + + Y G + ++ + + E
Sbjct: 86 PDAVQRLIKEGEENSALLVQHNSETTYARTDEALRARGVIFTDLHTALREHGELVRERLF 145
Query: 176 ----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY-LKYLSVEGGNVDSKKLPISNPR 230
+ D F +++ +YVP G +VE PI ++L V G + PR
Sbjct: 146 RLVPEGYDKFAALSAAAFSGGSFLYVPRGVEVEVPIQSYRWLDVAGSIM---------PR 196
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
+V+VEEG V I+E+ ++G + +N +E+ +G+G +++ LQN + N H
Sbjct: 197 TLVIVEEGASVTYIDEYASEDGEEPALSNGAVELFVGQGAHLQYVSLQNWARNVVHFNTI 256
Query: 291 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 350
+ E + + VS G +LSR NV P +++E+ + DQ D H+ L D
Sbjct: 257 RSQAEKDATINSLVVSFGAQLSRTNVEAGLTAPGSDSEMLGLYFADEDQLIDHHT--LQD 314
Query: 351 H--PRGYCRQLHK-CIVAHSLGQAVFDGNVKVN 380
H P+ + L+K + SL VF G ++V
Sbjct: 315 HIAPQAHSDLLYKGALRDESL--TVFSGLIRVE 345
>gi|426402180|ref|YP_007021151.1| [Fe-S] cluster assembly transport protein [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425858848|gb|AFX99883.1| transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus str. Tiberius]
Length = 419
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 41/332 (12%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSS 118
S S P L R + L+ P+RKDE + +T + S + P+ PS
Sbjct: 11 SQSNPAEGALSAFRKAGYDYALNKGLPTRKDEDWHYTSVKTLNEGTFLPSAVNPL-EPSH 69
Query: 119 SLDVST----DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
V + +F ++V +G + N L+ + LP GV +K VS + +
Sbjct: 70 DTLVEIKKYLNPEFANIVFFNGVL-NKTLS-AELPAGV-----------TLKDVSQYPVQ 116
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI-YLKYLSVEGGNVDSKKLP--ISNPRV 231
F D F ++NG V+ V VE P+ ++ + SVEGG P + +PR+
Sbjct: 117 FD--DTFDALNGAYMAKPFVVTVAKETSVEKPVNFVFFTSVEGG-------PSLMVHPRL 167
Query: 232 VVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 291
+ V ++E GK G Y+ANSV +V +G+ K + +Q +S +A +I T
Sbjct: 168 SFEIGARSYVRVLESHYGKAGT-TYFANSVSDVHVGESAKFVYVRVQAESESAVNIGRTR 226
Query: 292 VRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 351
+ E + E + +TG LSRH++ V GP + TE+ + + +Q D S L++H
Sbjct: 227 MVIEKDANVESLAFATGASLSRHSLDVILNGPGSNTEILGVYAVRGNQHLDNTS--LINH 284
Query: 352 PRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
G C QL+K I+ +AVF G V++ +
Sbjct: 285 KVGECNTNQLYKGIL-DGESRAVFCGTVRIEK 315
>gi|153003773|ref|YP_001378098.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
gi|152027346|gb|ABS25114.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
Length = 437
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 153/335 (45%), Gaps = 21/335 (6%)
Query: 56 LEDSLPSSSSSLP-QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-----MIKSSQ 109
LE SL + P +P L + R + + P+ +DE +RFT + +++ +
Sbjct: 4 LESSLVDLYAKDPREPGWLSEARAEALARFRARGLPTSRDEDWRFTSLAPLAPLVLERAH 63
Query: 110 IQPITRPSSSLDV--STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
+ +++ + + A+ LV +DG ++ + LP GV V L +
Sbjct: 64 VADADGGAAAALLDRAPGAEGTRLVFLDGRLRPELSRVGALPGGVVVCPLSRALREAPEL 123
Query: 168 VSDFISEFQC-GD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
V + GD F + N D G +++ AG ++ P+ L +L+ S +
Sbjct: 124 VRPHLGRLAPPGDHAFVAANAALMADGGFVHLAAGAALDAPVVLVFLA------SSHRPA 177
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
+++PR +V+ EG + E F+G EG Y N+V E+V+G+G +V H LQ++S A
Sbjct: 178 LASPRTLVVAGEGARATVAEVFLGTEG--VYLTNAVTELVLGEGAEVEHLRLQDESRRAF 235
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
H+ A Q+ + +S GG+LSR + + +G + ++ ++ D S
Sbjct: 236 HVGVVAAEQQARASLTAHALSLGGRLSRSELRTRLVGEQASVAANGLYMADGERLVDNFS 295
Query: 346 RLLLDHPRGYCRQLHKCIV-AHSLGQAVFDGNVKV 379
+ PR + +K ++ HS G VF G ++V
Sbjct: 296 WVEHVAPRCSTAETYKGVLDGHSRG--VFSGRIRV 328
>gi|209963826|ref|YP_002296741.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
gi|209957292|gb|ACI97928.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
Length = 439
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 157/350 (44%), Gaps = 43/350 (12%)
Query: 54 ESLEDSLPSSSSSLPQP-LP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+S + + +++LP LP L +LR + + T +P+ + E ++FT ++
Sbjct: 9 QSYVEQFKAHAATLPGAGLPWLDELRAAGLDRFVKTGFPTPRQESWKFT--------SLR 60
Query: 112 PITRPSSSLDVSTDAQFPS--------------LVLIDGFIQNSALNLSNLPDGVYVGSL 157
P+ R S L + A P+ +V + G + ++ LP G + SL
Sbjct: 61 PLERQSFGLAPALTAPVPAASIPTVAPDGGSHRMVFLGGRYRPDLSDIGGLPPGATLESL 120
Query: 158 ----LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
+ DG+ + + + G ++N D V+ + G V P+ L +LS
Sbjct: 121 GEALVRAPDGVAEHLGR--TATLDGHPLLALNLAFLTDGVVLRLARGTVVAKPVELVFLS 178
Query: 214 VEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+ G LP + +PR++VL EE E ++E VG C+ +N V E+V+G G ++
Sbjct: 179 SDDG------LPAAWHPRILVLAEENAEATLVEHHVGLGSATCF-SNIVAEIVLGAGARL 231
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 332
H +Q +SL+ H+ T + Y+ ++ G LSRH G T +S
Sbjct: 232 HHYKIQRESLSTIHLATTTAHVGRDATYDTFILNLGAALSRHEGRSVLEGTGTTCRISGA 291
Query: 333 HLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
+ + Q D+ + L+DH PRG R++ K ++ +AVF G + V
Sbjct: 292 YAVRGTQHTDITT--LIDHAKPRGTSREVVKGVI-DGQARAVFQGKIIVR 338
>gi|77165946|ref|YP_344471.1| FeS assembly protein SufD [Nitrosococcus oceani ATCC 19707]
gi|254433093|ref|ZP_05046601.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
gi|76884260|gb|ABA58941.1| Iron-regulated ABC transporter permease protein SufD [Nitrosococcus
oceani ATCC 19707]
gi|207089426|gb|EDZ66697.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
Length = 446
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 148/323 (45%), Gaps = 28/323 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP--- 129
L++LR + +S +P K+E +++T + + S ++ + ++
Sbjct: 30 LRELRQQALARFISLGFPGLKNEDWKYTRVRALAETAFNSAVSSSVAVSLEQCQRYFLAE 89
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD-------GIMKRVSDFISEFQCG 178
LV +DG + +LP G VG+L G G++ +D+ ++
Sbjct: 90 TPCFRLVFVDGCFAPGLSEIEDLPAGTVVGNLAGCFKQQGESLRGVLASYADYQNQ---- 145
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N D +Y+P + P++L +L+ + +++ R ++++E
Sbjct: 146 -PFTALNTAFMADGAYLYLPPRTVLAKPVHLIFLTT-----GRSEAVVTHSRNLIVLEPE 199
Query: 239 GEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
E+ +IE + G ND Y+ N+V E+ GKG V H LQ +S + HI V+QE
Sbjct: 200 SELTVIEHYAGL--NDAVYFTNTVTEIAAGKGANVEHIKLQEESAKSFHIATIQVQQEQD 257
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
+ + ++ GG+L+R++++ G L ++L + D H+R+ P +
Sbjct: 258 AQFLSRNLALGGRLARNDINSVLAGEGAGCILEGLYVLDGVRHVDNHTRVDHQQPHTTSQ 317
Query: 358 QLHKCIVAHSLGQAVFDGNVKVN 380
+ +K I+ +AVF+G V V+
Sbjct: 318 EFYKGIL-DGKSRAVFNGKVIVH 339
>gi|163796147|ref|ZP_02190109.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
gi|159178606|gb|EDP63146.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
Length = 429
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I + G E PI L ++ GG+ I++PRV+V+VEEG ++ +G
Sbjct: 145 IRIARGVMPEAPILLS-MATSGGD---GATAIAHPRVLVVVEEGASADLVTV---HQGTG 197
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
Y AN V E+++G G ++ HS LQ ++ A H+ T+VR + Y+ ++TG +L+RH
Sbjct: 198 AYMANPVTEIIVGAGARLSHSVLQAEAAEAFHVAMTSVRLADKATYDGFVLATGARLARH 257
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAV 372
V + G + ++ +L DQ DL + +DH P G ++ K ++ + V
Sbjct: 258 EVRAELAGRHIDYRINGVYLGAGDQHHDLTT--FIDHAQPHGASHEMVKGVLT-GRSRGV 314
Query: 373 FDGNVKVN 380
F G + V
Sbjct: 315 FQGKILVR 322
>gi|424775418|ref|ZP_18202411.1| hypothetical protein C660_01565 [Alcaligenes sp. HPC1271]
gi|422889128|gb|EKU31508.1| hypothetical protein C660_01565 [Alcaligenes sp. HPC1271]
Length = 435
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 143/316 (45%), Gaps = 19/316 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-----DAQ 127
L +R + WP+ + E + T ++++ P S++ V++ D
Sbjct: 25 LSAVRQRALDRFAQEGWPTTRIEAWHHTSLALLEQQSFAPQKSASAAELVASVRQQEDGY 84
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
F LV +DG + +L+ LP GV + SL + + + G ++N
Sbjct: 85 F--LVFVDGHYDAALSHLNELPAGVRLASLSTCLEQDADWLQQAYGDESLGASTAALNLA 142
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
A D +++ AG +E P++L ++ +GG+ S R ++ +E G ++E +
Sbjct: 143 LAQDGAALHIAAGKHLEQPVHLVFVRTQGGSA-------SFTRNLISLESGASATVVEHY 195
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 307
VG+EG D +++V + + + H LQ ++L H+ V+Q S + +S
Sbjct: 196 VGQEGTDASLSSAVTRLNVAPDANLTHMKLQQEALQDFHLAAIDVQQGRGSVFNSHSLSF 255
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 365
G +++R+++ G ET + + + D + + ++DH + C R+ ++ I+A
Sbjct: 256 GARIARNDIATVFNGERCETLFNGLYFV--DGRRHVDHNTIIDHAQPNCQSREFYRGILA 313
Query: 366 HSLGQAVFDGNVKVNR 381
+ + VF G V V +
Sbjct: 314 DT-ARGVFSGRVLVGK 328
>gi|197121305|ref|YP_002133256.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
gi|196171154|gb|ACG72127.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
Length = 439
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 17/300 (5%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPI------TRPSSSLDVSTDA-QFPSLVLIDGFIQNSA 142
P+ + E +RFT + + + + P P+ +L A + LV +G +
Sbjct: 39 PTPRHEDWRFTSLAALSTLSLAPAPAPEDGEGPARALLAGRPAPEGARLVFENGRFRREL 98
Query: 143 LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAG 200
+ + LP G +GSL + V + D F ++NG D + +PAG
Sbjct: 99 SSGAPLPAGAVLGSLADALRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPAG 158
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
+VE PI L + + G + +PRV+V+ EG + E +G D Y ANS
Sbjct: 159 ARVEAPIELVFATGAAGRAVA-----VHPRVLVVAGEGARATLAEVHLGT--GDTYLANS 211
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
V E+V+G+G ++ H LQ++ A H+ Q S ++ GG+L+R V +
Sbjct: 212 VTELVLGEGAEIEHLRLQDEGARAFHVSALFAEQAARSRLTAHGLALGGQLARSEVRARL 271
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
G E +S ++ +T D + + PR + +K I+ + VF G + V
Sbjct: 272 AGEGAELAVSGLYMADGARTTDAFTWVEHAVPRCTTTETYKGIL-DGRARGVFAGRIVVQ 330
>gi|344943945|ref|ZP_08783231.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
gi|344259603|gb|EGW19876.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
Length = 440
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 152/323 (47%), Gaps = 26/323 (8%)
Query: 69 QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-ITRPSSSLDVSTDA 126
Q LP L+ LR + + +PS ++E +R+T+ S I+ P ++ + LD
Sbjct: 23 QALPWLKALRAEALMAFSAHGFPSPREEEWRYTNVSGIEKKLFSPSLSLTAGDLDSEWLK 82
Query: 127 QFP-----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK---RVSDFI--SEFQ 176
+ S+VL++G NL++LP V S++ ++D ++K +V ++ + Q
Sbjct: 83 SYQLEDTWSVVLVNGHFSAELSNLTDLPSTV---SVMSMADALVKQPDKVEKYLGTAADQ 139
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
F + N D ++VP + PI L ++ V G + ++ R +++ +
Sbjct: 140 SEHSFIAFNTAWFTDGLFVHVPVKQVLNKPIQLLHI-VTGSD------AMATTRNIIIAD 192
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
E E +IE FVG + + Y +V EV +G V +Q++S A H + ++Q
Sbjct: 193 EMAEAKVIETFVGID--NAYLTAAVTEVFVGSNADVTLYKMQSESDKAYHFGGSYIKQAR 250
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
+ + + GG L+R ++H L +E EL+ +L V Q D H+R+ P
Sbjct: 251 DARFTHHNFAFGGLLARSDIHA-DLDHASECELNGLYLGVKRQHIDNHTRINHLKPYAIS 309
Query: 357 RQLHKCIVAHSLGQAVFDGNVKV 379
R+L+K ++ + VF G V V
Sbjct: 310 RELYKGVL-DDRARGVFQGRVIV 331
>gi|387127402|ref|YP_006296007.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM1]
gi|386274464|gb|AFI84362.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM1]
Length = 434
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 151/316 (47%), Gaps = 22/316 (6%)
Query: 74 QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----IQPITRPSSSLDVSTDAQF 128
+ LR+ + P RK+E +++T + + +QP + L + DA
Sbjct: 29 KSLREQAQYQFERMGLPGRKEEDWKYTSLWQLGQEEFRHRVVQPGFVETHELKLVVDAY- 87
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSING 186
+V+IDG + +A +++ LP G+ +L +S I +R S+F++ + F +IN
Sbjct: 88 -RIVIIDGRVDLTASSIAQLPSGL---TLTPLSKSI-ERASEFLNRQINMEKPGFNAINT 142
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
M + I V A K++ PI L + G+ + + R V+++ +G + IE
Sbjct: 143 MLMNEGVFIEVAANTKIDKPIEL--IVANSGHTPHYAMHL---RHVIVLGKGSQATFIET 197
Query: 247 FVGK-EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
+ G E N + V E+ + + ++ H LQ +SL+ H+ A Q S + +
Sbjct: 198 YAGNNEANGL--TDVVTEISLAENAELFHYKLQRESLDHYHVATMAATQAADSKWHNTNI 255
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 365
S G KL+R++VH Q +G + ++ +L+ +Q D H+R+ P +++K ++
Sbjct: 256 SLGAKLARNDVHSQLVGEQSHVTMNGLYLVTGEQHVDNHTRIDHSVPNTTSEEVYKGVLD 315
Query: 366 HSLGQAVFDGNVKVNR 381
AVF+G V V++
Sbjct: 316 EQ-SHAVFNGKVIVHK 330
>gi|393758120|ref|ZP_10346944.1| hypothetical protein QWA_03345 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165812|gb|EJC65861.1| hypothetical protein QWA_03345 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 435
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 147/320 (45%), Gaps = 27/320 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-----DAQ 127
L +R + + WP+ + E + T ++++ P S++ V++ D
Sbjct: 25 LSAVRQRALERFEQEGWPTTRIEAWHHTSLALLEQQSFAPRKSASAAELVASVRQQEDGY 84
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWS 183
F LV +DG + +L LP GV + SL ++R +D++ + G +
Sbjct: 85 F--LVFVDGHYDAALSHLDELPAGVRLASL----SACLERDADWLQQAYGDESQGASTAA 138
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N A D +++ AG +E P++L ++ +GG+ S R ++ +E G +
Sbjct: 139 LNLALAQDGAALHIAAGKHLEQPVHLVFVRTQGGSA-------SFTRNLISLESGASATV 191
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
+E +VG++G D ++ V + + + H LQ ++L H+ V+Q S +
Sbjct: 192 VEHYVGQDGMDASLSSVVTRLNVAPDANLTHMKLQQEALQDFHLAAIDVQQGRGSVFNSH 251
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
+S G +++R+++ G ET + + + D + + L+DH + C R+ ++
Sbjct: 252 SLSFGARIARNDIATVFNGERCETLFNGLYFV--DGRRHVDHNTLIDHAQPNCQSREFYR 309
Query: 362 CIVAHSLGQAVFDGNVKVNR 381
I+A + + VF G V V +
Sbjct: 310 GILADT-ARGVFSGRVLVGK 328
>gi|357405358|ref|YP_004917282.1| FeS assembly protein SufD [Methylomicrobium alcaliphilum 20Z]
gi|351718023|emb|CCE23688.1| FeS assembly protein SufD [Methylomicrobium alcaliphilum 20Z]
Length = 440
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 153/332 (46%), Gaps = 24/332 (7%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR 115
+E +LP S LP L+ LR + + +PS ++E +R+T+ S I+ + +P
Sbjct: 16 IETTLPGGS--LPW---LRALRSDALKQFSGRGFPSLREEEWRYTNVSGIEKNLFEPRLE 70
Query: 116 PSSS------LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
PS + L+ A +VL+DG+ +L++LP+ V V SL + + ++
Sbjct: 71 PSDNQIDKDWLENYRLADCWQIVLVDGYYSPELSDLADLPENVTVKSLSELLEADAGQIE 130
Query: 170 DFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
+ + D F + N I +PA ++ P+ L ++ D +L +
Sbjct: 131 TYFGQAVGIDEHSFVAFNTAWFTGGAFIRIPAKTVLDKPVQLLHVV-----TDPNRLATT 185
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
R +V+ E + I+E +VG + Y + S+ EV + + + +Q +S A H
Sbjct: 186 --RNLVIAESMAQAQIVETYVGT--DQSYLSASITEVFVEQNADLTLYKVQCESEKAYHF 241
Query: 288 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 347
T V+Q + + + GG L+R +HV LG +E L+ +L + Q D H+R+
Sbjct: 242 GGTYVKQGRNARFSHHNFAFGGLLARSEIHV-DLGHASECNLNGLYLGIKRQHLDNHTRI 300
Query: 348 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
P G R+++K ++ + VF G V V
Sbjct: 301 NHLEPHGISREVYKGVL-DGRARGVFQGRVVV 331
>gi|91790109|ref|YP_551061.1| FeS assembly protein SufD [Polaromonas sp. JS666]
gi|91699334|gb|ABE46163.1| Iron-regulated ABC transporter permease protein SufD [Polaromonas
sp. JS666]
Length = 447
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 150/340 (44%), Gaps = 26/340 (7%)
Query: 58 DSLPSSSSSLPQP-LP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----I 110
D +SLP LP L++ R++ + T P+ + E +++T + I+ + +
Sbjct: 11 DEFARLKASLPGGHLPWLRRAREAGLASFADTGLPTLRQEDWKYTSVAAIEKGRFVLATL 70
Query: 111 QPITRPSSSLDVSTDAQFPS---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
P T + D P LV ++G Q ++ LP GV + SL + + +
Sbjct: 71 TPPTPNGVTAQQIEDWSLPDTQRLVFVNGHYQPRWSRIAPLPAGVTLASLAELLERDPEC 130
Query: 168 VSDFIS----EFQCG---DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ + + G F ++N D +++ AG ++ PI+L +++ E G
Sbjct: 131 LESLLGPTPHAYPSGCYPSAFAALNAAFMSDGAYVHLAAGVALDTPIHLLFVTTEAG--- 187
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
L + R +V+ + G +IE V G Y+ N + ++V G+ ++ H LQ +
Sbjct: 188 ---LAVQT-RNLVVADAGSRASLIEHHVAV-GEGAYFTNVITDLVAGRDAEIEHHKLQQE 242
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
SL A H+ Q+ S + + G L+R ++ V T L ++ Q
Sbjct: 243 SLKAFHVAAVNADQQHGSRFTSRSFALGAVLARIDIGVGLNAEHTTCALDGLYMTDGRQH 302
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
D H+R+ P G R+ +K ++A + +AVF+G V V+
Sbjct: 303 IDHHTRIDHARPHGTSREFYKGVLAGA-SRAVFNGKVIVH 341
>gi|442318214|ref|YP_007358235.1| FeS assembly protein SufD [Myxococcus stipitatus DSM 14675]
gi|441485856|gb|AGC42551.1| FeS assembly protein SufD [Myxococcus stipitatus DSM 14675]
Length = 442
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 139/323 (43%), Gaps = 21/323 (6%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT--RPSSSLDVSTDAQ 127
P L +LR P+ +DE +++T+ + I P++ R ++ L + A+
Sbjct: 23 PAWLARLRQEGLAHFERLGLPTTRDEAWKYTNVAPIADGAFAPVSSVRDAAELKAAV-AR 81
Query: 128 F----PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--SDGIMKRVSDFISEFQCGDLF 181
P LV +DG + ++ L GV + L V DG F
Sbjct: 82 LALPGPRLVFVDGRLAPELSSVEGLARGVSLKPLRDVWAEDGAWLAEELGQRALAAEHAF 141
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N D V+ + E P+ L +L+ V +++PRV+V+ EG E
Sbjct: 142 TALNAALLEDGAVLRLAPRALSETPVQLLFLTRGDAPV------LASPRVLVVAGEGSEA 195
Query: 242 GIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
++E + G + N+V EV +G ++H +Q++ +A H+ VRQ S +
Sbjct: 196 TLVETYASVTGGSGPTFTNAVTEVTLGDNASLKHYRVQSEGDSALHVGGLHVRQGRDSRF 255
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQ 358
+ GG L+R VHV +G + L+ L V TQ L R LDH P R+
Sbjct: 256 ASHAFALGGALARTEVHVALMGEGADATLNG--LYVGRGTQHLDQRTALDHAVPNCTSRE 313
Query: 359 LHKCIVAHSLGQAVFDGNVKVNR 381
L+K ++ + F G V+V +
Sbjct: 314 LYKGVL-DDRARGTFHGLVRVRQ 335
>gi|158425237|ref|YP_001526529.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158332126|dbj|BAF89611.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 445
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 152/322 (47%), Gaps = 33/322 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQ--FPSL- 131
+LR +++ P+R+ E +++TD I + P+ P LD S +A+ F +L
Sbjct: 39 ELRRAAATAFSEGGLPTRRVEEWKYTDLKAILRDAV-PLAGP---LDASAEAEGSFKALT 94
Query: 132 -------VLIDGFIQNSALNLSNLPDGVY---VGSLLGVSDGIMKRVSDFISEFQCGDLF 181
+ ++G + A +L L G+ + S + +D + +R+ + Q D
Sbjct: 95 VPGAKRILFVNGALARPASDLLALESGIAALPLESAIASNDPLAERIGAL--QPQRYDAP 152
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN-PRVVVLVEEGGE 240
++N + + ++ V AG K+ P+++ NV + P++ RVVV+VE+G E
Sbjct: 153 LALNTVFLGEGLLVRVAAGAKIAAPLHI-------ANVFTGDDPVATYGRVVVVVEDGAE 205
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
V ++E F G++G Y N+ LE+ +G G V +Q + A H+ V +
Sbjct: 206 VTLVESFQGRDGV-AYQTNTALELFVGDGAHVDLVRVQEEGDAALHLSTVMVEIGREAQL 264
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 358
+++G K SR +++ + G + L +LL Q QD + LLLDH +C R+
Sbjct: 265 HTFALNSGAKASRTSLYGRFGGQHSHAGLRGANLLKGKQHQD--TTLLLDHAVPHCESRE 322
Query: 359 LHKCIVAHSLGQAVFDGNVKVN 380
L K ++A VF G + V
Sbjct: 323 LFKTVLADE-SHGVFQGKIVVR 343
>gi|86157272|ref|YP_464057.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773783|gb|ABC80620.1| Iron-regulated ABC transporter permease protein SufD
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 437
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 15/298 (5%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPI----TRPSSSLDVSTDA-QFPSLVLIDGFIQNSALN 144
P+ + E +RFT + + + + P P+ +L S A + LV +G +
Sbjct: 39 PTTRHEDWRFTSLAALSTLSLAPAPADGEGPARALLASRPAPEGARLVFENGRFRRELST 98
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAGCK 202
+ LP G +GSL + V + D F ++NG D + +P G +
Sbjct: 99 GAPLPAGAVLGSLADALRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGAR 158
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
V+ PI L + + G + +PRV+V+ EG + E +G D Y ANSV
Sbjct: 159 VDAPIELVFATGAAGRAVA-----VHPRVLVVAGEGARATLAEVHLGT--GDTYLANSVT 211
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
E+V+G+G ++ H LQ++ A H+ Q S ++ GG+L+R V + G
Sbjct: 212 ELVLGEGAEIEHLRLQDEGARAFHVSALFAEQAARSRLAAHGLALGGQLARSEVRARLAG 271
Query: 323 PDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
E +S ++ +T D + + PR + +K I+ + VF G + V
Sbjct: 272 EGAELAVSGLYMADGARTTDAFTWVEHAVPRCTTTETYKGIL-DGRARGVFAGRIVVQ 328
>gi|220916009|ref|YP_002491313.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953863|gb|ACL64247.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
Length = 437
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 15/298 (5%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPI----TRPSSSLDVSTDA-QFPSLVLIDGFIQNSALN 144
P+ + E +RFT + + + + P P+ +L A + LV +G + +
Sbjct: 39 PTPRHEDWRFTSLAALSTLSLAPAPDDGEGPARALLAGRPAPEGARLVFENGRFRRELSS 98
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAGCK 202
+ LP G +GSL + V + D F ++NG D + +P G +
Sbjct: 99 GAPLPAGAVLGSLADALRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGAR 158
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
VE PI L + + G + +PRV+V+ EG + E +G +D Y ANSV
Sbjct: 159 VEAPIELVFATGAAGRAVA-----VHPRVLVVAGEGARATLAEVHLGT--SDTYLANSVT 211
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
E+V+G+G ++ H LQ++ A H+ Q S ++ GG+L+R V + G
Sbjct: 212 ELVLGEGAEIEHLRLQDEGARAFHVSALFAEQAARSRLTAHGLALGGQLARSEVRARLAG 271
Query: 323 PDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
E +S ++ +T D + + PR + +K I+ + VF G + V
Sbjct: 272 EGAELAVSGLYMADGARTTDAFTWVEHAVPRCTTTETYKGIL-DGRARGVFAGRIVVQ 328
>gi|444919520|ref|ZP_21239535.1| Iron-sulfur cluster assembly protein SufD [Cystobacter fuscus DSM
2262]
gi|444708362|gb|ELW49433.1| Iron-sulfur cluster assembly protein SufD [Cystobacter fuscus DSM
2262]
Length = 441
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 153/344 (44%), Gaps = 27/344 (7%)
Query: 48 FVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
+ + LAE + + + P L+ LR + L +P+ ++E +++T+ S +
Sbjct: 8 YYLDLAERFQAERAAGA-----PAWLRALRQDGIEQLARQGFPTSRNEDWKYTNVSSVSC 62
Query: 108 SQIQPI-TRPSSSLDVSTDAQF-----PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GV 160
P+ T +S++ + + Q P LV +DG L LP+G+ V SL +
Sbjct: 63 QSFCPVHTVHEASMEAAVELQRLPGPGPRLVFVDGRFVRELSRLDGLPEGLQVRSLREAL 122
Query: 161 SDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+G + + + + + F ++N + + V G P+ L +L+
Sbjct: 123 EEGAP--LEELVGQRARAESSAFTALNVALLEEGAWVDVAPGTVCAEPVQLLFLAR---- 176
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
L +++PRVVV E+ ++E +VG + N+V EVV+G G +V H LQ
Sbjct: 177 -GVATLSLASPRVVVRAGANSELTLVESYVGV-APGVSFTNAVTEVVLGDGARVTHLKLQ 234
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
+S A HI V Q S + +S GG L+R+ VH L D E + L V
Sbjct: 235 AESEVAFHIGSLHVEQGRDSRFASHVLSLGGALARNEVHA--LFKDRGGEATLNGLYVGH 292
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVN 380
TQ L LDH + C R+L+K ++ + + F G V V
Sbjct: 293 GTQHLDQWTNLDHAQPDCTSRELYKGVLDDN-ARGTFHGKVMVR 335
>gi|119945238|ref|YP_942918.1| FeS assembly protein SufD [Psychromonas ingrahamii 37]
gi|119863842|gb|ABM03319.1| Iron-regulated ABC transporter permease protein SufD [Psychromonas
ingrahamii 37]
Length = 475
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 153/334 (45%), Gaps = 33/334 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI----QPITRPSSSLDVS-TDAQ 127
L LR+S+ + + +PS KDE +++T+T ++ ++ Q I P+ SL ++ Q
Sbjct: 26 LNDLRESAIKNFAAQGFPSPKDESWKYTNTKKLQQTEYCLAQQSIIPPTDSLTAQISEQQ 85
Query: 128 FP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
F +V I+G + + LP G+ + S ++ + E F
Sbjct: 86 FCPDEHRMVFINGTYHHDLSSNPPLPKGIILSSFAQALQDHPILIASTLGEMVNHQTHPF 145
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N D ++ ++ PI+ ++S + K + PR++++++ ++
Sbjct: 146 SALNSAFMSDGLFLWAAENSQMAPPIHCLFISTT-----TAKTVVCYPRLLLVLKNKTQL 200
Query: 242 GIIEEFV---------------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
+IE ++ G GN N+V E+ +G ++ H LQ +SLN++H
Sbjct: 201 TLIEHYIDLCSPRSDPDMTAANGTSGNP-NLINAVTEIHLGSEAQLDHYKLQRESLNSSH 259
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
I V+Q AS + S G L+R+++ V+ G E L+ +L +Q D H++
Sbjct: 260 IAAMYVQQHQASRFTSHSYSLGAPLARYDIQVELTGSQCECCLNGVYLADDNQHVDYHTQ 319
Query: 347 LLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
+ P +QL+K ++ +AVF+G V ++
Sbjct: 320 ITHLAPGCSSQQLYKGVI-QGHARAVFNGKVIIH 352
>gi|414167004|ref|ZP_11423234.1| FeS assembly protein SufD [Afipia clevelandensis ATCC 49720]
gi|410892282|gb|EKS40077.1| FeS assembly protein SufD [Afipia clevelandensis ATCC 49720]
Length = 440
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 157/350 (44%), Gaps = 33/350 (9%)
Query: 50 IQLAESLEDSL----PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
+ L +S D+L ++ S LP P+ ++R ++ + P R+ E +++TD +
Sbjct: 3 VALVQSTTDALGELFAAARSRLPGSGPVAEVRQNAFDDFVRRGLPHRRIEEWKYTDLRAL 62
Query: 106 KSSQIQPITRPSSSLDVSTDAQF---------PSLVLIDGFIQNSALNLSNLPDGVYVGS 156
++ P+ D++ A+ LVL+DG +++ L GV++ +
Sbjct: 63 LR-EVAPLAAAPDQADLTRAAKAIKALGIENTQKLVLVDGVFTPQLSDVTTLEAGVHLRT 121
Query: 157 LLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVE 215
L V DG K +D + D S+N A D V+ V G + PI++ +++ +
Sbjct: 122 LREVLEDGGNKVRADLLQTSVASDAMISLNAALATDGVVVDVAEGVTLTKPIHIVHVATD 181
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
G R ++ + +G + ++E FV EG Y + + + IG +++H
Sbjct: 182 SGTS-------LVTRSLLKLAKGAQATLVESFVAAEGAKSYQTHDSVVIWIGDEAELQHV 234
Query: 276 YLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 335
L +L+AAH+ + ++ GG +SR+ ++ G +E + +LL
Sbjct: 235 RLMEDALDAAHVTTGIFTIGAKAKLNTFNLTNGGSVSRYQGFIRFAGEGSELTTNGVNLL 294
Query: 336 VSDQTQDLHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVN 380
+ + D + L++DH +C R++ + ++ AHS VF G + V
Sbjct: 295 GARRHGD--TTLVVDHAVPHCSSREVFRAVLDDRAHS----VFQGRIIVQ 338
>gi|188583648|ref|YP_001927093.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
gi|179347146|gb|ACB82558.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
Length = 440
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 141/322 (43%), Gaps = 33/322 (10%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--------DAQF 128
R+ + + +T PSR+ E F++TD + P PS + + +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGAAGFAEVEA 93
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVS--DFISEFQCGDLFWS 183
L ++G + + +L +P+GV V L L D +K ++ + + E + +
Sbjct: 94 ARLTFVNGHLVAALSDLDRIPEGVTVTPLNAALAAGDARLKLLAPVEQVRE----NPIYQ 149
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVG 242
+N D +I V G K + P++L++ V + + S RV+V + G E
Sbjct: 150 LNTAFLADGALISVAPGAKPQTPVHLRF-------VGTGETAFSTATRVLVEIGAGAEFF 202
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E G G Y N L+V IG+ RH+ L + A + +VR + + E
Sbjct: 203 LLESHEGPSGL-TYQPNDALDVRIGEEAAFRHTRLNREGDAAIALSTISVRLDARAQLET 261
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLH 360
V + TG KLSRH +++ G D ++ LL Q D S LL DH G R++
Sbjct: 262 VNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLAD--STLLADHAATGGVGREMF 319
Query: 361 KCIV-AHSLGQAVFDGNVKVNR 381
K ++ S G VF G + V +
Sbjct: 320 KTVIDGDSTG--VFQGKIIVRQ 339
>gi|402832459|ref|ZP_10881105.1| FeS assembly protein SufD [Capnocytophaga sp. CM59]
gi|402277249|gb|EJU26333.1| FeS assembly protein SufD [Capnocytophaga sp. CM59]
Length = 432
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 30/342 (8%)
Query: 55 SLEDSLPSSSSSLP-QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
+L+D ++ + P Q L+ +R + + +S +P +K E +++T ++++
Sbjct: 3 NLKDKWEAAFAQFPHQNDILKDIRQEALRFFVSNGFPHKKIEAWKYTSLDGVQATDYVLW 62
Query: 114 TRPSSSLDVSTDAQFPS-------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
+ ++ +A P LV ++GF +S ++ + + D V LL + + K
Sbjct: 63 QPTHAKKTLAAEALHPYRIEGSHLLVFVNGFF-SSEMSDAAVADFT-VTPLL---EALHK 117
Query: 167 RVSDFISEF-----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
+DF+ ++ + GD+F ++N A + I VP G VE PI L YLS D
Sbjct: 118 GGADFVGKYFNAATEKGDVFTALNTAYAAEGVYIEVPKGKVVEKPIQLLYLS------DV 171
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
PR ++ V E E+ +IE N+V EV + K + + LQN +
Sbjct: 172 GTPTCFQPRNIISVGERAELKVIEMHHNLSQAQV-LTNAVTEVFVAKEAHLDYYKLQNDA 230
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
L A+ I T + QE S + S GG L+R+N++ G E+ L +L Q
Sbjct: 231 LQASLIDNTYISQEGQSHASVHTFSFGGTLTRNNLNFYHHGEYLESTLKGLSILEGQQHT 290
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQA--VFDGNVKVNR 381
D ++ + HP Q +K IV G+A VF+G + V++
Sbjct: 291 DHYTLVNHAHPNCESHQDYKSIVN---GEATNVFNGKIMVDQ 329
>gi|154706072|ref|YP_001424793.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164685980|ref|ZP_01947350.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165924043|ref|ZP_02219875.1| FeS assembly protein SufD [Coxiella burnetii Q321]
gi|212218764|ref|YP_002305551.1| SufD [Coxiella burnetii CbuK_Q154]
gi|154355358|gb|ABS76820.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164601505|gb|EAX32026.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165916502|gb|EDR35106.1| FeS assembly protein SufD [Coxiella burnetii Q321]
gi|212013026|gb|ACJ20406.1| SufD [Coxiella burnetii CbuK_Q154]
Length = 426
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 145/333 (43%), Gaps = 33/333 (9%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
E +L + + Q P QK +T L +P RK E +++T+ + PI
Sbjct: 6 ESALRALQNQNSQWHPWQK---EQLKTFLLHGFPHRKVENWKYTN--------VTPIAEQ 54
Query: 117 SSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
+ S +TDA LV I+G +LS LP V + SL + I +
Sbjct: 55 AFSFGENTDADIADFILPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNEL 114
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ ++Q F +N D + VP C +E PI+L +LS + L +S
Sbjct: 115 A-IKKDYQTA--FSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKP-----TASLTMSQ 166
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R V+L+EE + I EE+ G G Y+ N V ++ + + LQ + A HI
Sbjct: 167 IRHVILLEENAKAVIFEEYQGTNG-VAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIA 225
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 348
T++ Q S ++ G +LSR +++ +L F+ L D H+R
Sbjct: 226 NTSIHQNRHSQVTSGHIAMGSELSRDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTR-- 283
Query: 349 LDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+DH +C +Q +K I+A +AVF+G + V
Sbjct: 284 IDHRVSHCTSQQNYKGILADK-SRAVFNGKIIV 315
>gi|115372504|ref|ZP_01459812.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|310819044|ref|YP_003951402.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|115370466|gb|EAU69393.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|309392116|gb|ADO69575.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
Length = 441
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 18/320 (5%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQ-- 127
P+ L+ LR + L +P+ + E +++TD + I S P P + + +
Sbjct: 23 PVWLRTLRQEGLERLAQAGFPTTRHEAWKYTDVAPIVSRPFVPAW-PGKRVHLEACVEQR 81
Query: 128 ---FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FW 182
P V +DG + +L LP GV V SL + + + + + F
Sbjct: 82 ALPGPRWVFVDGLLAPELSSLEGLPPGVRVMSLREAVREEGEALEAVLGQRARAEAHPFV 141
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
++N + + V G + P+ L +L V G D +++PR+VV V E
Sbjct: 142 ALNAALLEEGVFVRVAPGTVAQVPVQLLFL-VSG---DGAAQVLASPRIVVDVGANAEAA 197
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E + G+E + + N+V EVV+G+ ++ H LQ ++ A H+ RQ S +
Sbjct: 198 LVEFYAGEE-DGASFTNAVTEVVLGENARLHHYKLQAETEGAYHLASLHARQARDSRFAS 256
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLH 360
+ GG L+R+ V G E +L+ L V Q L R LDH PR R+L+
Sbjct: 257 HSFALGGALARNEVSSVFGGEGGECQLNG--LYVGRGAQHLDHRTDLDHAVPRCTSRELY 314
Query: 361 KCIVAHSLGQAVFDGNVKVN 380
K ++ + F G V V
Sbjct: 315 KGVL-DGRSRGTFHGRVLVR 333
>gi|338974695|ref|ZP_08630053.1| iron-sulfur cluster assembly protein SufD [Bradyrhizobiaceae
bacterium SG-6C]
gi|338232290|gb|EGP07422.1| iron-sulfur cluster assembly protein SufD [Bradyrhizobiaceae
bacterium SG-6C]
Length = 440
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 156/350 (44%), Gaps = 33/350 (9%)
Query: 50 IQLAESLEDS----LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
+ L +S D+ ++ S LP P+ ++R ++ P R+ E +++TD +
Sbjct: 3 VALVQSTTDAPGELFAAARSRLPGSGPVAEVRQNAFDDFARRGLPHRRIEEWKYTDLRAL 62
Query: 106 KSSQIQPITRPSSSLDVSTDAQF---------PSLVLIDGFIQNSALNLSNLPDGVYVGS 156
++ P+ D++ A+ LVL+DG +++ L GV++ +
Sbjct: 63 LR-EVAPLAPAPDQADLTRAAKAIKSLGIENTQKLVLVDGVFTPQLSDVTTLEAGVHLRT 121
Query: 157 LLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVE 215
L V DG K +D + D S+N A D V+ V G + PI++ ++S +
Sbjct: 122 LREVLEDGGNKVRADLLQTSVASDAMISLNAALATDGVVVDVAEGVTLTRPIHIVHVSTD 181
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
G+ R ++ + +G + ++E FV EG Y + + + IG +++H
Sbjct: 182 SGSS-------LVTRSLLKLAKGAQATLVESFVAAEGAKSYQTHDSVVIWIGDEAELQHV 234
Query: 276 YLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 335
L +L+AAH+ + ++ GG +SR+ ++ G +E + +LL
Sbjct: 235 RLMEDALDAAHVTTGIFTIGAKAKLNTFNLTNGGSVSRYQGFIKFAGEGSELTTNGVNLL 294
Query: 336 VSDQTQDLHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVN 380
+ + D + L++DH +C R++ + ++ AHS VF G + V
Sbjct: 295 GARRHGD--TTLVVDHAVPHCSSREVFRAVLDDRAHS----VFQGRIIVQ 338
>gi|163853378|ref|YP_001641421.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
gi|163664983|gb|ABY32350.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
Length = 440
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 137/320 (42%), Gaps = 29/320 (9%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS------ 130
R+ + + +T PSR+ E F++TD + P PS + A+
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAETTGFNAVEA 93
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGDLFWSIN 185
L ++G + S +L +P+GV V L +G D +K ++ Q + + +N
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRQ--NPIYQLN 151
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVGII 244
D +I V G K PI+L++ V + + S RV+V V E ++
Sbjct: 152 TAFLADGALISVAPGAKPATPIHLRF-------VGTGEAAFSTATRVLVDVGAEAEFFLL 204
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
E G G Y N L+V IG RH+ L + A + +VR + + E V
Sbjct: 205 ESHEGPAGL-TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVRLDARAQLETVN 263
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKC 362
+ TG KLSRH +++ G D ++ LL Q D S LL DH G R++ K
Sbjct: 264 LVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLAD--STLLADHAATGGVGREMFKT 321
Query: 363 IV-AHSLGQAVFDGNVKVNR 381
++ S G VF G + V +
Sbjct: 322 VIDGDSTG--VFQGKIIVRQ 339
>gi|335043122|ref|ZP_08536149.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Methylophaga aminisulfidivorans MP]
gi|333789736|gb|EGL55618.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Methylophaga aminisulfidivorans MP]
Length = 434
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 151/337 (44%), Gaps = 29/337 (8%)
Query: 61 PSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
P + Q LP LQ+LR +S PS+K E +++T S+ SQ + T
Sbjct: 10 PFDDIAATQTLPGQELGWLQQLRQQASAQFQRQGLPSKKVEDWKYT--SLWALSQ-EAFT 66
Query: 115 R--PSSSLDVSTDAQFP------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
+S LD +Q LV++DG +L L G+ V L
Sbjct: 67 HEAAASQLDEMRCSQVALLETAYRLVIVDGQFSAELSHLDGLEAGLTVEPLSQAFPKTKS 126
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+ +S + G ++N M + I V A KV P+ L L + G D KL
Sbjct: 127 VLGQQVSLEKAG--LNALNTMLMTEGAYIQVTANTKVSKPVEL--LVINTGETD--KLA- 179
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
++ R V+ + E E+ ++E +V N + + EV + + + H LQ++SL+ H
Sbjct: 180 THLRHVIDIAEDAELTLVEHYVSLADNSVGLTDVISEVNLAEKAHLSHFKLQHESLSHYH 239
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
I A +Q ++S + +S G KL+R+++H Q LG + +L+ Q D H+R
Sbjct: 240 IATLAGKQASSSVWHTNNISLGAKLARNDIHSQLLGEQAHVTMDGLYLVAGKQHVDNHTR 299
Query: 347 LLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+DH P +++K ++ AVF+G V V++
Sbjct: 300 --IDHAVPNTTSEEIYKGVLDGD-SHAVFNGKVIVHK 333
>gi|212212267|ref|YP_002303203.1| SufD [Coxiella burnetii CbuG_Q212]
gi|212010677|gb|ACJ18058.1| SufD [Coxiella burnetii CbuG_Q212]
Length = 426
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 33/333 (9%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
E +L + + Q P QK +T L +P RK E +++T+ + PI
Sbjct: 6 ESALRALQNQNSQWHPWQK---EQLKTFLLHGFPHRKVENWKYTN--------VTPIAEQ 54
Query: 117 SSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
+ S +TD LV I+G +LS LP V + SL + I +
Sbjct: 55 AFSFGENTDTDIADFILPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNEL 114
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ ++Q F +N D + VP C +E PI+L +LS + L +S
Sbjct: 115 A-IKKDYQTA--FSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKP-----TASLTMSQ 166
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R V+L+EE + I EE+ G G Y+ N V ++ + + LQ + A HI
Sbjct: 167 IRHVILLEENAKAVIFEEYQGTNG-VAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIA 225
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 348
T++ Q S ++ G +LSR +++ +L F+ L D H+R
Sbjct: 226 NTSIHQNRHSQVTSGHIAMGSELSRDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTR-- 283
Query: 349 LDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+DH +C +Q +K ++A +AVF+G + V
Sbjct: 284 IDHRVSHCTSQQNYKGVLADK-SRAVFNGKIIV 315
>gi|170747131|ref|YP_001753391.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
gi|170653653|gb|ACB22708.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
Length = 440
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 136/325 (41%), Gaps = 39/325 (12%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA---------- 126
R+ + + +T PSR+ E F++TD + P PS LDV+ A
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPS--LDVAEAAVARAKGFSGI 91
Query: 127 QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL------ 180
+ L ++G + +L +P+GV V + +SD + + D Q +
Sbjct: 92 EAARLTFVNGHLVRELSDLDGIPEGVTV---VPMSDALTRAHVDLK---QLAPVPQAREN 145
Query: 181 -FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEG 238
+ +N D +I V G K P++L++ V + P S RV+V + EG
Sbjct: 146 PVYQLNTAFLADGALITVAPGAKPARPLHLRF-------VGAGDAPFSTATRVLVQLGEG 198
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
E ++E G +G C N L+VV+G RH+ L + + +++ E
Sbjct: 199 AEFSLLESHEGPDGLTCQ-PNDALDVVVGPRAAFRHTRLNTEGDATIALSTLSLKVEAEG 257
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYC 356
E V + TG LSRH + V G DT ++ +L Q D S LL DH G
Sbjct: 258 QVETVNLVTGAVLSRHQIFVHVAGEDTNLVVNGAAMLRKGQLAD--STLLADHAAVGGVG 315
Query: 357 RQLHKCIVAHSLGQAVFDGNVKVNR 381
R+ K I+ VF G + V +
Sbjct: 316 REQFKWIIDGD-ATGVFQGKIIVRQ 339
>gi|29654655|ref|NP_820347.1| FeS assembly protein SufD [Coxiella burnetii RSA 493]
gi|161831539|ref|YP_001597200.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
gi|29541923|gb|AAO90861.1| SufD [Coxiella burnetii RSA 493]
gi|161763406|gb|ABX79048.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
Length = 426
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 33/333 (9%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
E +L + + Q P QK +T L +P RK E +++T+ + PI
Sbjct: 6 ESALRALQNQNSQWHPWQK---EQLKTFLLHGFPHRKVENWKYTN--------VTPIAEQ 54
Query: 117 SSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
+ S +TD LV I+G +LS LP V + SL + I +
Sbjct: 55 AFSFGENTDTDIADFILPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNEL 114
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ ++Q F +N D + VP C +E PI+L +LS + L +S
Sbjct: 115 A-IKKDYQTA--FSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKP-----TASLTMSQ 166
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R V+L+EE + I EE+ G G Y+ N V ++ + + LQ + A HI
Sbjct: 167 IRHVILLEENAKAVIFEEYQGTNG-VAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIA 225
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 348
T++ Q S ++ G +LSR +++ +L F+ L D H+R
Sbjct: 226 NTSIHQNRHSQVTSGHIAMGSELSRDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTR-- 283
Query: 349 LDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+DH +C +Q +K ++A +AVF+G + V
Sbjct: 284 IDHRVSHCTSQQNYKGVLADK-SRAVFNGKIIV 315
>gi|332284498|ref|YP_004416409.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
gi|330428451|gb|AEC19785.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
Length = 435
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 12/310 (3%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS---LDVSTDAQFP 129
L +R + + S WP+ K E +R T + ++ P + S + V +
Sbjct: 26 LAAMRKRAIERFASEGWPTTKQENWRHTSLATLEQQSFLPAGQASVADLVNQVRANESGH 85
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV DG + ++ +LP G + +L V D + G ++N A
Sbjct: 86 WLVFTDGRFDPALSDIGDLPGGAQILALSAALADSPDTVQDLFGDETQGASTAALNLALA 145
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D VI + G ++E P++L +++ + + S PR ++ E G I+E ++G
Sbjct: 146 SDGAVIRLARGVELEKPVHLIFIA-------ASQQAASFPRNLIQAEAGSRAVIVEHYLG 198
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
+ + N+V + V H LQ++ A H+ V Q T S Y +S G
Sbjct: 199 QN-SGASLTNTVTRAQLAADAHVTHLKLQHEDEQAVHLGAIDVVQATGSVYNSHSMSFGA 257
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
+L+RH++ G E L+ + + + D H+ + P G + ++ ++A +
Sbjct: 258 RLARHDIATDFSGDHCEALLNGLYYVNGRRHVDHHTLIGHSKPHGVSHEYYRGVLADT-A 316
Query: 370 QAVFDGNVKV 379
+ VF G + V
Sbjct: 317 RGVFSGRILV 326
>gi|148261257|ref|YP_001235384.1| FeS assembly protein SufD [Acidiphilium cryptum JF-5]
gi|326404671|ref|YP_004284753.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
gi|146402938|gb|ABQ31465.1| Iron-regulated ABC transporter permease protein SufD [Acidiphilium
cryptum JF-5]
gi|325051533|dbj|BAJ81871.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
Length = 399
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 134/295 (45%), Gaps = 31/295 (10%)
Query: 89 WPSRKDEPFRFTDTSM-IKSSQIQPITRPSSSLDVSTD-AQFPSLVLIDGFIQNSALNLS 146
WP+++DE + +TD + ++ + P+ +++V+ + + P +V ++G + S
Sbjct: 33 WPTKRDEAWHYTDLAAGLRGFALG----PAPAVEVAAELPEGPRVVFVNGRFDAA---RS 85
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENP 206
PD V ++ D ++ G + ++N A D GV A +
Sbjct: 86 AAPDWV-------------SQLGDAAADPARGGVVVALNTALAED-GVAITLAPGQQGGT 131
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
++L L+ G + +P PR +++ G + +IE G Y V EV +
Sbjct: 132 LFLVALAAGRG----ETMPAIAPRHRIVLGAGATLTLIET---ARGEGSYLHAPVFEVDL 184
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTE 326
G G ++ H LQ++S A H+ +GYE ++ G +LSR+ H + GP +
Sbjct: 185 GAGARLNHYRLQDESAEAVHVATIFAEIAGGAGYESFTLNRGARLSRNETHARLTGPAAD 244
Query: 327 TELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L++ LL Q D+ + + D P RQ K ++A + + VF G ++V+R
Sbjct: 245 VHLNAAQLLAGTQHGDVTTVVRHDAPDCASRQTVKSVLAGA-ARGVFQGRIEVDR 298
>gi|392964323|ref|ZP_10329744.1| FeS assembly protein SufD [Fibrisoma limi BUZ 3]
gi|387847218|emb|CCH51788.1| FeS assembly protein SufD [Fibrisoma limi BUZ 3]
Length = 441
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 153/320 (47%), Gaps = 24/320 (7%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPS 130
PL +LR S+ Q +P+ K E +++++ S+IK + S D+ D Q P+
Sbjct: 33 PLHQLRRSALQQFERLGFPTIKHEEWKYSNVNSLIKQAFDIDGASSISEADMD-DLQIPN 91
Query: 131 L-----VLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGDLFW 182
L ++G + + + + V + S L ++ + +++Q + F
Sbjct: 92 LEGNILYFVNGQYKPDLSRIVSPAEQVQITSFAEALKAEPELIDKHFARYADYQ-DNAFT 150
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEV 241
++N A D V+ VP G VE PI L++++ D+++ I S PR +++V EV
Sbjct: 151 ALNTALANDGVVVRVPNGKTVEQPIILRFIT------DAREKNIASQPRNLIIVGRNAEV 204
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
+ E + G+ ++N+V E+V+ + + ++ +QN+S A HI T V Q S +
Sbjct: 205 TLAESY-RTLGDRSSFSNAVTEIVVEQDARAQYYKVQNESEAAYHIGTTQVYQADNSHFY 263
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQL 359
V+ G R+N+++ G E + ++ Q D H+ L+DH P Y +L
Sbjct: 264 SATVTLNGNFVRNNLNIVLNGQHCEAFMYGLYMPNGRQHVDNHT--LVDHAMPNSYSNEL 321
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
+K I+ S G VF+G + V
Sbjct: 322 YKGILDDS-GTGVFNGKIFV 340
>gi|405355139|ref|ZP_11024365.1| Iron-sulfur cluster assembly protein SufD [Chondromyces apiculatus
DSM 436]
gi|397091481|gb|EJJ22283.1| Iron-sulfur cluster assembly protein SufD [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 446
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 29/328 (8%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF- 128
P L+ LR + P+ +DE ++++ + I QP+ R + D + A
Sbjct: 25 PQWLKHLRADALAHFERQGLPTPRDEAWKYSRLAPIAEGAFQPVVRDAR--DAAHLASVV 82
Query: 129 -------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--SDGIMKRVSDFISEFQCGD 179
P LV +DG + +++ LP G+ + L DG + + + +
Sbjct: 83 ERLALPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGAL--LESLVGQRALAK 140
Query: 180 --LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
F ++N + ++ + G E P+ L +L+ G V +S+PR++V E
Sbjct: 141 EHAFTALNAALLEEGALLRLAPGALSEAPVQLLFLTRGEGPV------LSSPRILVDAGE 194
Query: 238 GGEVGIIEEFV--GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
E ++E + G G+ + N+V EV +G + H LQ ++ A H+ RQ
Sbjct: 195 SSEATLVETYASAGPAGSGATFTNAVTEVTLGDNASLHHYKLQAEADAALHVGALHARQG 254
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PR 353
S + + GG ++R+ VH G + L+ L V Q L +R LDH PR
Sbjct: 255 RDSRFASHAFAFGGAMARNEVHAAFAGEGGDATLNG--LYVGQGAQHLDNRTALDHAVPR 312
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
R+L+K ++ + F G ++V +
Sbjct: 313 CTSRELYKGVL-DGQSRGTFHGLIRVRQ 339
>gi|299472231|emb|CBN77201.1| FeS assembly protein SufD [Ectocarpus siliculosus]
Length = 524
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 147/336 (43%), Gaps = 28/336 (8%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
++P+P L +L + L P+RK EP+R+TD + + +++ + +
Sbjct: 129 AVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFTSAAPTTTAAETAAA 188
Query: 126 --------AQFPSLVLIDGFIQNSALNLSNLP--DGVYVGSLLGVSDGIMKRVSDFIS-- 173
+Q +V ++G + ++S L +G+ G + + + + + +S
Sbjct: 189 IKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQAKEMLSYL 248
Query: 174 -----EFQC--GDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+F+ G L F S+N D GVI V G VE PI + + S EG +
Sbjct: 249 PEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFS-EG----EEGPT 303
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
+S+PR+VV V + + ++ + G AN V++G V H Y + S +
Sbjct: 304 VSHPRLVVKAGADSHVTLTQSYLSRGG--VCLANGFTRVLVGDRATVTHDYAEEMSASDR 361
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
+ +V Q T S Y + +V +G +R N + L + + + L ++Q QD+HS
Sbjct: 362 LVDTVSVDQTTNSTYSVNQVLSGAFDARANFQIDLLETGSHCNIFTAALTTNNQRQDVHS 421
Query: 346 RLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ C Q + +V+ + VF G + +++
Sbjct: 422 TIRHKAEGTTCLQEQRNVVSDT-ADCVFKGRIVIDQ 456
>gi|124005856|ref|ZP_01690694.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
gi|123988539|gb|EAY28180.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
Length = 442
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 150/323 (46%), Gaps = 29/323 (8%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-SMIKSSQIQPITRPSSSLDVSTDAQF-- 128
P+ K+R + Q+ +P+ K E +++T+ ++K + T P D+ QF
Sbjct: 31 PIHKIRQQAIQSFDGLGFPTTKHEEWKYTNLGKVLKEAYTFGQTSPLQKADIE---QFFL 87
Query: 129 ------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--L 180
++V ++G Q + + + D + V +L D V ++ +
Sbjct: 88 PNMPKANNIVFVNGVYQPTLSQIVSSEDVLVVKNLEEAYDTHTTLVEPHFAQLANSEEEA 147
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS-VEGGNVDSKKLPISNPRVVVLVEEGG 239
++N D I+VPA VE P L +++ GNV + PR +++VE+G
Sbjct: 148 LIALNTAFVQDGVFIHVPANKVVEAPTVLYFINDARNGNVGVQ------PRSLIVVEQGA 201
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ +++ G ++N+V+EVV+ ++ H +QN NA+++ T V+Q + S
Sbjct: 202 QATFVDK-TDTIGGQASFSNAVMEVVVEPNARMTHYKVQNDQPNASYVGTTQVKQASDSY 260
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCR 357
Y +S G + R+N+++ G + E+ + ++L + D HS + DH P
Sbjct: 261 YANTTISLNGGVIRNNLNIALDGSNVESNMFGLYMLTGNTHVDNHS--VADHLKPHSLSN 318
Query: 358 QLHKCIV-AHSLGQAVFDGNVKV 379
+L+K ++ S G VF+G + V
Sbjct: 319 ELYKGVLDGKSTG--VFNGKIFV 339
>gi|218532235|ref|YP_002423051.1| FeS assembly protein SufD [Methylobacterium extorquens CM4]
gi|218524538|gb|ACK85123.1| FeS assembly protein SufD [Methylobacterium extorquens CM4]
Length = 440
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 141/322 (43%), Gaps = 33/322 (10%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVSTDAQFPS--- 130
R+ + + +T PSR+ E F++TD + P PS + V+ F +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGTTGFNAVEA 93
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVS--DFISEFQCGDLFWS 183
L ++G + S +L +P+GV V L +G D +K ++ + + E + +
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRE----NPIYQ 149
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVG 242
+N D +I V G K PI+L++ V + + S RV+V V E
Sbjct: 150 LNTAFLADGALISVAPGAKPATPIHLRF-------VGTGEAAFSTATRVLVDVGAEAEFF 202
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E G G Y N L+V IG RH+ L + A + +VR + + E
Sbjct: 203 LLESHEGPAGL-TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVRLDARAELET 261
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLH 360
V + TG KLSRH +++ G D ++ LL Q D S LL DH G R++
Sbjct: 262 VNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLAD--STLLADHAATGGVGREMF 319
Query: 361 KCIV-AHSLGQAVFDGNVKVNR 381
K ++ S G VF G + V +
Sbjct: 320 KTVIDGDSTG--VFQGKIIVRQ 339
>gi|94501135|ref|ZP_01307658.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
gi|94426711|gb|EAT11696.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
Length = 451
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 146/319 (45%), Gaps = 23/319 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP--- 129
+ + ++ + + P+P+RK E +++T S+ +Q Q P + DV+ F
Sbjct: 29 FKSINEAGLEQFKALPFPTRKTEAWKYT--SLFALTQ-QDYNHPVQNTDVTGVESFEIPE 85
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWS 183
LV ++G Q S L++ + G+ V + ++D + + D LF +
Sbjct: 86 LDVHRLVYVNGVYQES-LSVIDQESGLSVVRFSDADESQKSIIADKLGQTAETDRNLFTA 144
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N D +I+V +VE PI L ++ + S + R ++++E V +
Sbjct: 145 LNNAQVNDGVLIHVAKETQVEKPIQLVNITTQQAQPAS-----AFARHLIVLERHANVKV 199
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
IE+F+ + N E + G K+ H + + ++ H V + S +E
Sbjct: 200 IEQFISSDDEQNVLLNQTSEAYVADGAKLEHYRVHTEHESSLHFGGMYVDLQRDSQFESY 259
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHK 361
++ GGK+ R +V V P + E+ +L +DQ D+HS ++H +C ++++
Sbjct: 260 QMLLGGKIKRFDVLVNHNQPGSHCEMKGVYLPKNDQHVDIHS--YIEHKAAHCTTDEVYR 317
Query: 362 CIVAHSLGQAVFDGNVKVN 380
I+A + +AVF+G + ++
Sbjct: 318 GIMADN-SKAVFNGRIHIH 335
>gi|254563304|ref|YP_003070399.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
gi|254270582|emb|CAX26585.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
Length = 440
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 139/322 (43%), Gaps = 33/322 (10%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--------DAQF 128
R+ + + +T PSR+ E F++TD + P PS + + +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGTTGFNEVEA 93
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVS--DFISEFQCGDLFWS 183
L ++G + S +L +P+GV V L +G D +K ++ + + E + +
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRE----NPIYQ 149
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVG 242
+N D +I V G K PI+L++ V + + S RV+V V E
Sbjct: 150 LNTAFLADGALISVAPGAKPATPIHLRF-------VGTGEAAFSTATRVLVDVGAEAEFF 202
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E G G Y N L+V IG RH+ L + A + +VR + + E
Sbjct: 203 LLESHEGPAGL-TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVRLDARAQLET 261
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLH 360
V + TG KLSRH +++ G D ++ LL Q D S LL DH G R++
Sbjct: 262 VNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHSQLAD--STLLADHAATGGVGREMF 319
Query: 361 KCIV-AHSLGQAVFDGNVKVNR 381
K ++ S G VF G + V +
Sbjct: 320 KTVIDGDSTG--VFQGKIIVRQ 339
>gi|375013273|ref|YP_004990261.1| FeS assembly protein SufD [Owenweeksia hongkongensis DSM 17368]
gi|359349197|gb|AEV33616.1| FeS assembly protein SufD [Owenweeksia hongkongensis DSM 17368]
Length = 439
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 145/338 (42%), Gaps = 31/338 (9%)
Query: 54 ESLEDSLPSSSSSLPQPL------PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
E+L+D L SS L P+ K+R ++ + + +P++KDE +++T+ I
Sbjct: 2 EALKDKLESSFIVFENELDDDAKKPVHKIRQNAFKRFEESGFPTKKDEEWKYTNLKPILK 61
Query: 108 SQIQPITRPSSSLDVS-------TDAQFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLG 159
+ + + + +++D +D LV IDG F + + D + S+L
Sbjct: 62 NDFRILNKSENAIDFKDVRRYFLSDVDSYKLVFIDGVFSSWLSETTHDKFDICTLSSMLN 121
Query: 160 VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+ + K+ F + SIN A + I + V+ P+ + + + +
Sbjct: 122 RYEDVTKKY--FNKALPQAETMASINTAFAKEGAFIRIKKNQTVDKPVQIVFFTT-AHDY 178
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
D ++ PR +V+VEE EV I+E N+ E+ K ++ + +QN
Sbjct: 179 D----IMTQPRNLVVVEENAEVKIVERHQSLSEKPV-LTNTATEIFAEKNSRLFYYKVQN 233
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
++ A+ I T V+Q S + S G + R+N++ G E+ L ++ Q
Sbjct: 234 DNMEASIIDSTTVKQAEGSNVRVGTFSFGNRFIRNNLNFFLEGEHIESHLDGITVINEGQ 293
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNV 377
D H+ L DH + C +H L + ++DGN
Sbjct: 294 FVDQHT--LADHQKPNCE-------SHELYKGIYDGNA 322
>gi|240140794|ref|YP_002965274.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
gi|418058018|ref|ZP_12696000.1| FeS assembly protein SufD [Methylobacterium extorquens DSM 13060]
gi|240010771|gb|ACS41997.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
gi|373568471|gb|EHP94418.1| FeS assembly protein SufD [Methylobacterium extorquens DSM 13060]
Length = 440
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 139/322 (43%), Gaps = 33/322 (10%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS--------TDAQF 128
R+ + + +T PSR+ E F++TD + P PS + + +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGTAGFNEVEA 93
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVS--DFISEFQCGDLFWS 183
L ++G + S +L +P+GV V L +G D +K ++ + + E + +
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRE----NPIYQ 149
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVG 242
+N D +I V G K PI+L++ V + + S RV+V V E
Sbjct: 150 LNTAFLADGALISVAPGAKPATPIHLRF-------VGTGETAFSTATRVLVDVGAEAEFF 202
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E G G Y N L+V IG RH+ L + A + +VR + + E
Sbjct: 203 LLESHEGPAGL-TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVRLDARAQLET 261
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLH 360
V + TG KLSRH +++ G D ++ LL Q D S LL DH G R++
Sbjct: 262 VNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLAD--STLLADHAATGGVGREMF 319
Query: 361 KCIV-AHSLGQAVFDGNVKVNR 381
K ++ S G VF G + V +
Sbjct: 320 KTVIDGDSTG--VFQGKIIVRQ 339
>gi|414173284|ref|ZP_11428047.1| FeS assembly protein SufD [Afipia broomeae ATCC 49717]
gi|410891936|gb|EKS39732.1| FeS assembly protein SufD [Afipia broomeae ATCC 49717]
Length = 441
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 148/340 (43%), Gaps = 29/340 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L + ++ LP P+ + R ++ P R+ E +++TD + +I P+
Sbjct: 13 ALGELFAAARGRLPGSGPVAEFRQNAFDDFARLGLPHRRIEEWKYTDLRALLR-EIAPLA 71
Query: 115 RPSSSLDVSTDAQF---------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGI 164
D++ A+ LVL+DG +++ L GV++ +L V DG
Sbjct: 72 PAPDQADLARAAKAVKSLGIDSTQKLVLVDGVFAPQLSDVTALEAGVHLRTLREVLEDGS 131
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
K +D + D S+N A D VI V G + PI++ +++ + G
Sbjct: 132 NKVRADLLQTSVASDAMISLNAALATDGVVIDVAEGAALAKPIHIVHVATDSGTS----- 186
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
R ++ V +G V +E FV EG Y + + + IG +++H L +L+A
Sbjct: 187 --LVTRSLLKVGKGARVTFVESFVAAEGAKSYQTHDSVVIWIGDEAELQHVRLMEDALDA 244
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
A+I + ++ GG +SR+ + G +E + +LL + + D
Sbjct: 245 ANISTGIFTIGAKAKLNTFNLTNGGNISRYQGFITFAGEGSELTTNGVNLLGARRHGD-- 302
Query: 345 SRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKV 379
+ L++DH +C R++ + ++ AHS VF G + V
Sbjct: 303 TTLVVDHAVPHCSSREVFRSVLDDRAHS----VFQGRIIV 338
>gi|90424335|ref|YP_532705.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB18]
gi|90106349|gb|ABD88386.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisB18]
Length = 459
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 152/355 (42%), Gaps = 35/355 (9%)
Query: 48 FVIQLAESLEDSLPSSSS------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD 101
FV+ +A + + S+S+ LP P+ + R +S + S P+R+ E +++TD
Sbjct: 18 FVMNVAATQIAPVASASAFDAVRARLPGSEPVTERRQASFEAYASKGLPNRRIEDWKYTD 77
Query: 102 TSMIKSSQIQPITRPSSSLDVSTDAQF--------PSLVLIDGFIQNSALNLSNLPDGVY 153
++ + P + A LVL+DG S + + L +
Sbjct: 78 LRVLMREVLPLAAAPDEAALQRAAAALAQLETRDTTKLVLVDGVFAPSLSDHAGLEAAIE 137
Query: 154 VGSLLGV--SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKY 211
+ SL V DG R +D ++ D S+N A D +I V G V PI++ +
Sbjct: 138 IRSLADVLGDDGNASR-ADLLNIKASADAMISLNAAMATDGVLITVADGASVGKPIHIVH 196
Query: 212 LSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGK 271
++ ++ S R + + G V +E FVG G Y AN + + +G G +
Sbjct: 197 VA-------TQSKAASYTRSFLKLGNGARVTFVESFVGAAGAASYQANDAVVIWVGDGAE 249
Query: 272 VRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSS 331
+ H L +L+A +I + + +++GG +SR+ V G +
Sbjct: 250 LEHVRLMEDALDAINISTAVFTVGAKAKLNTLNLTSGGGVSRYQGFVSIAGEGAHVATNG 309
Query: 332 FHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNR 381
+LL Q D + L+L+H +C R++ + ++ AHS VF G + V++
Sbjct: 310 VNLLKGTQHGD--TTLVLNHVVPHCTSREVFRAVLDGRAHS----VFQGRINVHQ 358
>gi|407781307|ref|ZP_11128526.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Oceanibaculum indicum P24]
gi|407208190|gb|EKE78116.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Oceanibaculum indicum P24]
Length = 442
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 30/324 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR-PSSSLDVSTDAQFPS- 130
L LR S+ P+ + E +RFT+ + + P P +LD + +
Sbjct: 30 LAALRADSAARCRQNGLPTTRVEAWRFTNLKDLVAGDFTPAGNVPDMALDSLPASSLLAV 89
Query: 131 ----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL------ 180
L ++G + + LPDGV +LL +S+ I R + G L
Sbjct: 90 NGHVLAFVNGRFRAELSTIDALPDGV---ALLPLSEAI--RTDEQSLSAHLGHLTEAEEN 144
Query: 181 -FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
F +N D V+ + G ++ P++L V G V + + PR++V++ +G
Sbjct: 145 PFADLNTAFLEDGLVLRLADGVTLDRPVHL----VSIGAVADRAVAFF-PRLLVVLGKGT 199
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ + E G G Y++N V+E V+G+G + H LQN+S A HI T + +
Sbjct: 200 KATLFESHAGLGG--AYFSNGVMEAVLGEGAHLEHYKLQNESPEAFHIANTRISVASQGF 257
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCR 357
Y+ + TG +L+R+ V V G + LS +L Q L + +DH P R
Sbjct: 258 YDGFVLQTGSRLARNEVQVALNGENARCHLSGAYL--GTGRQHLDNTTFIDHAVPDCASR 315
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
+++K ++ VF G + V R
Sbjct: 316 EVYKGVLDER-AHGVFQGKILVRR 338
>gi|154248387|ref|YP_001419345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154162472|gb|ABS69688.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 142/323 (43%), Gaps = 29/323 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS--------SQIQPITRPSSSLDVS 123
L +L + + + P+R+ E +++TD + ++ S +LDV
Sbjct: 37 LGELSADALEAFRAHGLPNRRVEEWKYTDLRAAVRDFPPLAGSPGTAAEAEAASQTLDVP 96
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVY---VGSLLGVSDGIMKRVSDFISEFQCGDL 180
A+ L+ + G + A + + LP GV + + D ++ R+ + G L
Sbjct: 97 HAAR---LLFVSGALARGASDFAGLPAGVSALPLDAAKAAHDPLVDRIGSLQPDRYDGAL 153
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
+ +G + V+ V AG + P++L Y+ +++ R VV+V +G E
Sbjct: 154 ALNTGFLG--EGLVMKVDAGTRAAKPVHLAYV------FPAEEAVAGFTRTVVVVGDGAE 205
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
+ ++E F G+EG Y AN +E+V+G G V LQ + +A H+ V A+
Sbjct: 206 LTLVESFTGREGV-AYQANHAMELVVGDGATVNLVRLQEEGASALHLGTLMVELGRAAKL 264
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 358
+ + G LSR++V+ + G T + LL Q D + + +DH C R+
Sbjct: 265 NVFSLVQGAALSRYSVYGRFQGTGTNLGVRGATLLKGRQHAD--TTMFIDHAVAGCESRE 322
Query: 359 LHKCIVAHSLGQAVFDGNVKVNR 381
L K +++ VF G + V R
Sbjct: 323 LFKTVLSDE-AHGVFQGKIVVRR 344
>gi|359786382|ref|ZP_09289517.1| Fe-S cluster assembly protein SufD [Halomonas sp. GFAJ-1]
gi|359296232|gb|EHK60485.1| Fe-S cluster assembly protein SufD [Halomonas sp. GFAJ-1]
Length = 446
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 14/299 (4%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALN 144
+P+R+DE +++TD I S + P L +DG ++ +
Sbjct: 41 FPTRRDEEWKYTDVRTIAQGNFALADNAEFSQATAATLTLPLDAYRLTFVDGVFSSALSD 100
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCK 202
L LP V V L + V + D F ++N + V+ + G
Sbjct: 101 LEALPSSVQVMPLSKALSENHEAVGGPLGRLTGVDFSAFAALNTAFTEEGAVVRIAPGTV 160
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
VE PI L++LS G V + +PR++V E IIE + G E + + N V
Sbjct: 161 VEKPILLQFLSRAGSPV------MCHPRILVEAAGRSEATIIEHYAG-EADAANFTNVVA 213
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
E+++ +G + H LQ L H+ V Q + Y ++ GG L R+++ G
Sbjct: 214 ELMLDRGAILNHYKLQEAPLGDMHVASIHVEQNRDTRYSSYNLNLGGALVRNDLISDLNG 273
Query: 323 PDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
ET Q D H+++ + P + + +K I+ VF+G V V R
Sbjct: 274 QGAETNFYGLFFGQGRQHVDNHTKVNHNAPLTFSNENYKGIL-DDRAHGVFNGKVYVKR 331
>gi|86140875|ref|ZP_01059434.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
gi|85832817|gb|EAQ51266.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
Length = 437
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 151/339 (44%), Gaps = 22/339 (6%)
Query: 55 SLEDSLPSSSSSLPQPLPLQK----LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+D L SS + + ++D + + + +PS+KDE +++T + +
Sbjct: 2 SLKDKLLSSYLTFQENTSFDNSILDIKDQAIKVFETEGFPSKKDENWKYTSLNSVTKPDY 61
Query: 111 QPITRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVSD 162
++ +++ Q+ +V IDG + +S L+ DGV V L ++
Sbjct: 62 SLVSHADDAIEFKDVKQYFLNDIDTFKIVFIDG-VYSSYLS-ETTHDGVDVCLLSSALTK 119
Query: 163 GIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
K+V D + ++ + ++N A + IYVP V PI + +LS S
Sbjct: 120 PKFKQVIDVYFNKIAKKESLTALNTAFAKEGAYIYVPKSRAVNKPIQIVHLST-----GS 174
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ + PR +++ EE EV +IE N + NSV E+ GK +V + +QN
Sbjct: 175 EANLMLQPRNLIVAEENAEVQVIERHQSLSSN-AVFTNSVTEIYAGKHARVDYYKIQNDK 233
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
NA+ I T + Q+ +S + S GGKL+R+N++ Q G + L ++ Q
Sbjct: 234 ENASLIDNTHIDQQESSEVSVHTFSFGGKLTRNNLNYYQNGEHINSILKGVTIIEDKQHV 293
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
D ++ + P Q +K I VF+G V V+
Sbjct: 294 DHNTLVHHRQPNCESHQDYKGIF-DDRATGVFNGKVVVD 331
>gi|254515561|ref|ZP_05127621.1| FeS assembly protein SufD [gamma proteobacterium NOR5-3]
gi|219675283|gb|EED31649.1| FeS assembly protein SufD [gamma proteobacterium NOR5-3]
Length = 430
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPS-SSLDVSTDAQF--PSLVLIDGFIQNSALNLS 146
P+R+ E +++T S ++ S SL + A F LV +DG Q + N +
Sbjct: 33 PTRRTENWKYTGLSALRDDYALADAETSLESLPENLAAGFGGSRLVFVDGIYQPALSNTA 92
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFI-SEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVE 204
+ DGV V S+ R+++ + + D LF ++N D + + A V+
Sbjct: 93 H-ADGVQVCRFDDASEAQADRIAEHLNTSLDVEDHLFAALNTATLRDGVFVEIAANASVD 151
Query: 205 NPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLE 263
P+ + YL V + PI+ N R++VL + G I+E FV + + + N + E
Sbjct: 152 APVEVLYL------VSAAAAPIAINQRLLVLAQTGACATIVEHFVSLDAANESFCNGMTE 205
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 323
+++ ++ H + +S NA HI R + + E ++ G L R ++ V GP
Sbjct: 206 LLLAPNARLSHYRIHEESGNAVHIGGVHARLDRDAHLESFHLALGSVLKRFDLVVNHAGP 265
Query: 324 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVN 380
L+ +L D+ D H+ ++H +C ++ + I+A AVF+G + ++
Sbjct: 266 GAYASLNGVYLPRGDEHIDYHT--TIEHAVPHCDTDEVFRGIIA-DRATAVFNGRIHIH 321
>gi|305665682|ref|YP_003861969.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
gi|88710440|gb|EAR02672.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
Length = 438
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 23/340 (6%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ +R + + +PS+KDE +++T ++
Sbjct: 3 LKDKLVSSFMAFENKVDVEHPVHDIRSEAIKNFEEKGFPSKKDEAWKYTSLKGLQKIDFS 62
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSDG 163
+ ++L+ +F +V IDG I +S L+ DGV + + ++
Sbjct: 63 IFPKEVNALEYKDVKKFFLHEIESYKIVFIDG-IYSSFLS-ETTHDGVDICLMSAALTKP 120
Query: 164 IMKRVSD-FISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
+ K+V D + ++ D ++N + + IY+P + PI + Y S GN S
Sbjct: 121 MYKQVIDVYFNKIASKDETLTTLNTAFSREGAYIYIPKNKMPKKPIEILYFST--GNEAS 178
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
L PR +V+VEE EV IIE N+ N+V E+ + + + +QN S
Sbjct: 179 LML---QPRSLVVVEENAEVQIIERHQSLTSNEV-LTNAVTEIFAAENSIIDYYKVQNDS 234
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
A+ I T + Q++ S ++ S GGKL+R+N++ Q G ++ + +L Q
Sbjct: 235 KTASLIDNTYINQKSKSVVKVHTFSFGGKLTRNNLNFYQNGEHIDSTMKGVTILGYKQHV 294
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + P Q +K I + VF+G + V++
Sbjct: 295 DHHTLVHHIEPNCESHQDYKGIYGEN-STGVFNGKIIVDK 333
>gi|429746994|ref|ZP_19280301.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429164464|gb|EKY06597.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 380 str.
F0488]
Length = 439
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 150/328 (45%), Gaps = 37/328 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 27 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 86
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCG 178
A LV ++G+ + S+ L+ GV V LL + + K FI ++ + G
Sbjct: 87 ADCYVLVFVNGYYCPEMSSKELT----GVTVTPLL---EALHKGGEAFIKKYFNVNTEKG 139
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N A + I VP G V+ PI L Y + D K+ PR ++ V E
Sbjct: 140 DVFTALNTTFASEGIYIEVPKGRVVDKPIQLLYFN------DRKETTCYQPRNIIAVGEN 193
Query: 239 GEVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
++ +IE V + +D A N+V EV + K + + LQN SL A+ I T + QE
Sbjct: 194 AQLKVIE--VHQNLSDTATAILTNAVTEVFVAKEAFLDYYKLQNDSLTASLIDNTYISQE 251
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PR 353
S + S GG L+R+N++ G E+ L +L Q D ++ L++H P
Sbjct: 252 ANSHASVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILKGTQHTDHYT--LVNHACPN 309
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q +K IV+ VF+G + V +
Sbjct: 310 CESHQDYKSIVSDE-ATNVFNGKIMVEQ 336
>gi|350563274|ref|ZP_08932096.1| FeS assembly protein SufD [Thioalkalimicrobium aerophilum AL3]
gi|349779138|gb|EGZ33485.1| FeS assembly protein SufD [Thioalkalimicrobium aerophilum AL3]
Length = 446
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 152/344 (44%), Gaps = 27/344 (7%)
Query: 52 LAESLEDSLPSSSSSLPQP----LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-MIK 106
+A++ D + ++ L Q L + R ++ + +PSRKDE ++FT S +K
Sbjct: 14 VAQAAMDYYQAQATRLIQAEGEGHALARFRQAALNEFIEQGFPSRKDEDWQFTPLSNFLK 73
Query: 107 SS-QIQPITRPSSSLDVSTDAQFPS---LVLIDGFIQNS-ALNLSNLPDGVYVGSLLGVS 161
+ I+R +++ D++ F LV +DG+ S + +L LPDGV + S
Sbjct: 74 THYHFNGISRATAA-DIAKLRPFVDAWHLVFVDGYFSESLSDDLVGLPDGVSIESGKDAL 132
Query: 162 DGIMKRVSDFISEFQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS--VEGGN 218
D M SE D F +N M D I V ++E PI + Y+ E N
Sbjct: 133 DFEMGFCVFAQSEEDIQQDAFGMLNAMLFDDGVFIEVAPHVQLEKPIVISYVQTLAEHAN 192
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ K+ + + + +IE++V + + + NSV E+ + ++ Q
Sbjct: 193 IVRNKIKLGSS---------ASLNVIEQYVAID-DGWGFENSVCEIELAANARLNQVVWQ 242
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
N A + + S + + GG +SRH HVQ G E+E +S +
Sbjct: 243 NLPEQATYFNNQFIDLAEHSQFRTHYIGLGGAISRHQNHVQMDGDRIESEQNSVCFARNQ 302
Query: 339 QTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 381
Q D + +G RQLHK ++A ++G VF+G +KV++
Sbjct: 303 QIVDTRTYTGHKAEQGLSRQLHKLVLADQAIG--VFNGMIKVDQ 344
>gi|160331083|ref|XP_001712249.1| sufD [Hemiselmis andersenii]
gi|159765696|gb|ABW97924.1| sufD [Hemiselmis andersenii]
Length = 471
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 146/319 (45%), Gaps = 25/319 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD--AQF-- 128
+ +LR + L +T +PS+KDE +RFT K ++ + +S +V+ D +F
Sbjct: 66 INQLRKIGNNILKNTNFPSKKDESWRFT-----KLDRLFGMKFANSDSEVNADFVKKFFL 120
Query: 129 ----PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---DLF 181
V ++G S D ++G +++ K++ D + + G F
Sbjct: 121 ENSQARCVFLNGVFFPSLFQARENTDSYFLGRFSDLNEKERKKIRDLAGKGESGINGGFF 180
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGE 240
+N ++ V+Y+ A K+++PI + + S + + PI N +++++ E+ +
Sbjct: 181 PILNLANLDEIAVLYIKADSKIKDPIQILFSS------STNETPICINQKLIIVCEKNSK 234
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
II+ VG ++ ++ NS +++ + ++ + + A++ S +
Sbjct: 235 AKIIQHHVGSNESE-FFDNSTTTILVDEEAQIDFFLINQVTEKASNFNSIHADLRKGSSF 293
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ S GG LSR ++ + G + + ++ + Q D+HSR+ ++P QL
Sbjct: 294 NFLSASFGGFLSRISLGIDLNGINASCNVEGVTVVKNSQISDIHSRISHNYPLCKSSQLQ 353
Query: 361 KCIVAHSLGQAVFDGNVKV 379
K +++ G A+F G V+V
Sbjct: 354 KNLISDK-GHAIFAGKVQV 371
>gi|296116549|ref|ZP_06835159.1| FeS assembly protein SufD [Gluconacetobacter hansenii ATCC 23769]
gi|295976761|gb|EFG83529.1| FeS assembly protein SufD [Gluconacetobacter hansenii ATCC 23769]
Length = 422
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 121/253 (47%), Gaps = 24/253 (9%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
+VL++G S LS LP GV+V + +D + +D+I CGD+ ++N + A
Sbjct: 90 IVLVNGRFDAS---LSRLPQGVHVTAF--AADPVF---ADWIDP--CGDVGTALNTVMAD 139
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVG 249
D V+ V AG + L ++V G PIS +PR + + G + ++E VG
Sbjct: 140 DGAVVRVDAGVDA-GALLLVSIAVAG------DAPISFHPRHRIDLGAGARLAVLEATVG 192
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
GN Y N V EV + +G ++ H+ LQ + A+ I T + + Y+ ++ G
Sbjct: 193 V-GN--YLHNPVFEVRVTEGARLTHARLQAEGQQASQIAVTHAQVASDGLYDSFNLTLGA 249
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSL 368
LSRH VH LG ++ LL + Q DL S + P RQ K ++A H+
Sbjct: 250 LLSRHEVHAALLGERACVHVNGAQLLDAKQHGDLSSIITHAAPNCVSRQTVKNVLAGHAR 309
Query: 369 GQAVFDGNVKVNR 381
G VF G + V R
Sbjct: 310 G--VFQGKIHVER 320
>gi|374849932|dbj|BAL52934.1| Fe-S cluster assembly protein SufD [uncultured beta
proteobacterium]
Length = 441
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 146/352 (41%), Gaps = 42/352 (11%)
Query: 44 FSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQT-LLSTPWPSRKDEPFRFTDT 102
+ P V L E+ +LP S S R +++T LS +P R+DE +++T
Sbjct: 7 IAQPLVAHL-ETYRPTLPESVSE----------RQWAARTRFLSRGFPVRRDEEWKYTS- 54
Query: 103 SMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+Q I + +L + D P D + A + DG L+ D
Sbjct: 55 -------VQGIANRAFALPDAADV-LPQATPTDHESPHGATHQWRFVDG----HLVAAPD 102
Query: 163 GIMKRVSDFISEFQCGDLFWS--------------INGMGAPDLGVIYVPAGCKVENPIY 208
+ + VS D FW ++ A G + + V P+
Sbjct: 103 SLPEGVSALPLAVALADPFWQERFAALATSEHSSFVDLNTALASGGLCLRIAAPVATPLE 162
Query: 209 LKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
+ + G + +P++ +PR++V+VE G +IE +G + ++ N+V E+++
Sbjct: 163 IVWQVRAGVAGEGAPVPLAVHPRLLVVVEAGASATLIEHAIG-DAASSHFVNAVAEIIVA 221
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 327
+ ++ H +Q I AV E + Y + GG+L+RH+++V P
Sbjct: 222 RDAQLTHYVVQELPAAVQQIATHAVAVEANACYRSFNIQLGGRLARHDINVHLHAPGAVA 281
Query: 328 ELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
EL +L+ Q D H+RL + R+ ++ ++ G+ VF G V+V
Sbjct: 282 ELEGLYLVGMRQHIDTHTRLFHEAAATTSRERYR-LIGLERGRGVFKGKVRV 332
>gi|338213041|ref|YP_004657096.1| FeS assembly protein SufD [Runella slithyformis DSM 19594]
gi|336306862|gb|AEI49964.1| FeS assembly protein SufD [Runella slithyformis DSM 19594]
Length = 439
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 17/206 (8%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL-PISNPRVVVLVEE 237
D F ++N A D V++VP G VE PI L++++ DS+ + S PR +++V +
Sbjct: 145 DAFTALNTAFAHDGVVVHVPEGKVVEEPIILRFIT------DSRSVNAASQPRNLIVVGK 198
Query: 238 GGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
EV + E F +G G+ + N V E+V+ + V++ +QN++ A HI T V Q+
Sbjct: 199 NAEVKMAESFRTIGDNGS---FTNVVTEIVVEENANVQYYKVQNETEKAYHIGTTQVLQK 255
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PR 353
S + V V+ G R+N+++ G E+ + + Q D H+ L+DH P
Sbjct: 256 DKSHFYAVTVTVNGGFVRNNLNIVLDGQYCESFMYGLYFPNGKQHVDNHT--LVDHAKPN 313
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKV 379
Y +L+K I+ VF+G + V
Sbjct: 314 SYSNELYKGILKDK-STGVFNGKIFV 338
>gi|410694648|ref|YP_003625270.1| putative Protein sufD [Thiomonas sp. 3As]
gi|294341073|emb|CAZ89470.1| putative Protein sufD [Thiomonas sp. 3As]
Length = 439
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 138/330 (41%), Gaps = 24/330 (7%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD 121
S + + +P + R + + LL + P+R E +++T + + + T P++ LD
Sbjct: 14 SGAYAAAEPAWCAQARHQAREDLLRSGLPTRHTEDWKYTSLRALDAIDL-ATTAPTALLD 72
Query: 122 VST--DA------QFPSLVLIDGFIQNSALNLSNLPDGVYV---GSLLGVSDGIMKRVSD 170
DA P LV +DG +LS+LP GV + G+ L + V D
Sbjct: 73 GEALRDAGALLVGDGPRLVFVDGAFDAELSHLSDLPPGVSLAPWGAGLSHNATASGAVLD 132
Query: 171 FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
+ G F +IN + A D + + G + P+ + L G S+ R
Sbjct: 133 AAAR---GGAFEAINRLFARDGMALELADGVCLAAPVVVIALQTRAGA--------SHLR 181
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
V+ + +G +IE+ +G Y + SV + +G + H LQ++S A H+
Sbjct: 182 HVLRLGQGSWARVIEQHIGLAQMVPYLSTSVTRAELARGATLAHVRLQDESGAAVHVSQL 241
Query: 291 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 350
V Q S + + G +LSR H+ P T+L +L +Q D+H +
Sbjct: 242 HVAQGRDSRLDARLLVVGARLSRQEFHIAHEAPGCHTDLRGASVLAGEQHGDVHMCIEHR 301
Query: 351 HPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
HPR R + + + VF G V V+
Sbjct: 302 HPRSTSRTDVRGVFDDA-SHGVFTGRVNVH 330
>gi|332878306|ref|ZP_08446032.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332683757|gb|EGJ56628.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 433
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 29/324 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS-SLDVSTDAQF 128
L+ +R + +P +K E +++T S ++++ QP+ ++ S +V +
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKIEAWKYTSLSKLQATDYSLWQPVNEKATLSAEVLHEYSI 80
Query: 129 P---SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCGDL 180
SLV ++GF A S GV + LL + + K FIS++ + GD+
Sbjct: 81 KDCYSLVFVNGFY--CAEMSSKEIAGVTITPLL---EALHKGGEAFISKYFNTTTEKGDV 135
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++N A + I VP G V+ PI L Y + D + PR ++ V E +
Sbjct: 136 FTALNTAFASEGIYIEVPKGKVVDKPIQLLYFN------DRGETTCYQPRNIIAVGENAQ 189
Query: 241 VGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
+ +IE V + ++ A N+V E+ + K + + LQN L A+ I T + QE
Sbjct: 190 LKVIE--VHQNVSNTATAILTNAVTEIFVAKEAFLDYYKLQNDRLTASLIDNTYISQEAN 247
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S + S GG+L+R+N++ G E+ L +L Q D ++ + +P
Sbjct: 248 SHASVHTFSFGGELTRNNLNFYHQGEHLESTLKGLSILQGSQHTDHYTLVNHAYPNCESH 307
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
Q +K IV+ VF+G + V +
Sbjct: 308 QDYKSIVSDE-ATNVFNGKIMVEQ 330
>gi|149278439|ref|ZP_01884576.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
gi|149230809|gb|EDM36191.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
Length = 435
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 21/320 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVSTDA-QFP 129
L LR S T +P+ K E +++T+ S + K QI P T +SL + + Q P
Sbjct: 22 LAALRAGSFGTFDQKGFPTTKLEEWKYTNISSLFDKEYQISPFTDNPASLAAAIEEIQLP 81
Query: 130 S------LVLIDGFIQNSALNLSNLPDGVYVGSLL-GVSDGIMKRVSDFISE--FQCGDL 180
L ++G + S + + + + V LL S G + + + E D
Sbjct: 82 EHTNANVLYFVNGRYEPSLSIIRSTIEELQVMPLLQAASAGFQEIIDQHLGESSVYLKDG 141
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGG 239
++N D I+V AG ++ +P+Y+ +L+ D++ I + PR +V V +
Sbjct: 142 IHALNTSFITDAVFIHVAAGKELSHPVYIYHLA------DAQHQAILTQPRSLVYVSKRA 195
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
++ I E F D + +N+V+EVV+ + + + LQN + + + + T + Q S
Sbjct: 196 KIQIAETFRTVGTMDSF-SNAVMEVVVAQDAFLEYYKLQNDAAHTSQVSSTHIHQTGKSH 254
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 359
V +S G L R+N+++ ET L LL D H+ + HP + QL
Sbjct: 255 VHTVTISLNGGLLRNNLNMILDAEGNETHLYGLSLLKGKTHVDNHTLIDNKHPNCFSNQL 314
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
+K I A VF G + V
Sbjct: 315 YKNI-ADDAATGVFSGRIIV 333
>gi|429756138|ref|ZP_19288749.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|429171988|gb|EKY13573.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 433
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 29/324 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCG 178
+ LV ++G+ + S+ L GV V LL + + K FI ++ + G
Sbjct: 81 SDCYQLVFVNGYYCPEMSSKELI----GVTVTPLL---EALHKGGETFIKKYFNTNTEKG 133
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N A + I VP G V PI L Y + D K+ PR ++ V E
Sbjct: 134 DIFTALNTAFASEGIYIEVPKGKVVNKPIQLLYFN------DRKETTCYQPRNIIAVGEN 187
Query: 239 GEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
++ +IE + + N+V EV + K + + LQN SL A+ I T + QE
Sbjct: 188 AQLKVIEVYQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDSLTASLIDNTYISQEAN 247
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S + S GG L+R+N++ G E+ L +L Q D ++ + +P
Sbjct: 248 SHASVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILQGTQHTDHYTLVNHAYPNCESH 307
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
Q +K IV+ VF+G + V +
Sbjct: 308 QDYKSIVSDE-ATNVFNGKIMVEQ 330
>gi|372220666|ref|ZP_09499087.1| FeS assembly protein SufD [Mesoflavibacter zeaxanthinifaciens S86]
Length = 438
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 155/342 (45%), Gaps = 19/342 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + + P+ ++R + + + +PS+K+E +++T I+
Sbjct: 1 MELKDKLISSFLAFENQVDLDHPVHEVRSEAIKNFEAKGFPSKKEEAWKYTSLKSIEKVD 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ +++L+ +F +V +DG + +S L+ DGV V +
Sbjct: 61 FSIFPKETNALEYKDVKKFFLHEIDTYKIVFVDG-VYSSYLS-ETTHDGVDVCLMSAAFS 118
Query: 163 GIMKR--VSDFISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
M + + + ++ D ++N + + IY+P PI + +L+ GN
Sbjct: 119 KPMYKEVIEKYFNKVASKDESLTTLNTAFSREGAYIYIPKSKAPRKPIQILHLAT--GNE 176
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ L PR +++VEE EV IIE N+ + N+V E+ K +V + +QN
Sbjct: 177 AALML---QPRNLIVVEENAEVQIIERHQSLTTNEVF-TNAVTEIFAAKDARVDYYKVQN 232
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+ A+ + T + Q+T S + S GGKL+R+N++ Q G ++ L +L Q
Sbjct: 233 DAPTASLVDNTYIDQKTNSQVRVHTFSFGGKLTRNNLNYYQNGEHIDSTLKGVTILGEKQ 292
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K I S VF+G + V++
Sbjct: 293 HVDHYTLVHHAQPNCESHQDYKGIYGDS-STGVFNGKIIVDK 333
>gi|365859211|ref|ZP_09399085.1| FeS assembly protein SufD [Acetobacteraceae bacterium AT-5844]
gi|363712921|gb|EHL96588.1| FeS assembly protein SufD [Acetobacteraceae bacterium AT-5844]
Length = 424
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 141/298 (47%), Gaps = 26/298 (8%)
Query: 89 WPSRKDEPFRFTDTSMI-KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSN 147
+P+RK E + FTD M+ +S+ + +T S+++ V +DG + +LS
Sbjct: 47 FPTRKIEAWHFTDLGMMARSAFTEALTPVDGSVELPASHASRRAVFVDGRFRE---DLSE 103
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENP 206
P +G+ L ++G++ V+ + D+ ++N M D +I +PAG E+
Sbjct: 104 TPV-QSLGANLSAAEGLLGSVA------RVDDVPLAALNTMLFEDGALIDLPAG---EDG 153
Query: 207 IYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
++ LS+ +++ PI+ +PR V+ + +G + +IE +G+ G Y N V+E+V
Sbjct: 154 GTIELLSI----IEANDRPIAVHPRHVIRLGKGATLVLIERAIGR-GEGRYLHNPVVEIV 208
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
+ +G + H+ +Q + + + + + Y+ + G K SR HV GP
Sbjct: 209 LEEGAHLTHARIQQEGKDGIFLSTVFAKAAAGATYDSFLLHAGAKFSRSEAHVSLDGPKA 268
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
L+ LL Q D + LDH C RQ K ++A + VF G + V++
Sbjct: 269 MAHLNGAQLLSDGQFGDCTT--FLDHAAPDCASRQTVKTVLAGK-SRGVFQGKIHVHQ 323
>gi|406941270|gb|EKD73804.1| hypothetical protein ACD_45C00183G0020 [uncultured bacterium]
Length = 432
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 150/324 (46%), Gaps = 32/324 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----------QIQPITRPSSSLDV 122
L R Q ++ +P+ DE +++T+ IK + Q+Q I +
Sbjct: 27 LCDFRYRQWQEFMARGFPTCSDEKWKYTE---IKENRVPNHSGRLVQLQSIAKHV----F 79
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD 179
S D Q +V ++G + N++ LP GV + S+ L + ++K I + Q
Sbjct: 80 SEDMQSIRVVFVNGHFAENLSNMAALPMGVTLSSVQQALAQQEDVIKPYLTQIFDKQRFP 139
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
F +N D + +P K+ PI+L +++ + + + NPR +++ +
Sbjct: 140 -FAVLNSALMTDGIFLQIPENVKLSTPIHLLFMNTQQNDF------MINPRNIIVANKNS 192
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+V IE+ VG E Y+ N+V ++ V + +Q++ A H+ V Q+ S
Sbjct: 193 QVTFIEDHVG-EAAQHYFTNAVTDIYTKDNACVEYYKIQDEDSAATHVASLFVNQQQDSQ 251
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCR 357
+ ++ G +L+R +V ++Q+ ++ L F+ L S Q + + +DH +G
Sbjct: 252 IKTYFLARGCQLAREDVQIKQVASGAKSYLHGFYCL-SKNGQHVDHHVQVDHLAAQGESV 310
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
L++ I+A+ +AVF+G V V++
Sbjct: 311 MLYRGILANK-SRAVFNGKVYVDQ 333
>gi|387791804|ref|YP_006256869.1| FeS assembly protein SufD [Solitalea canadensis DSM 3403]
gi|379654637|gb|AFD07693.1| FeS assembly protein SufD [Solitalea canadensis DSM 3403]
Length = 432
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 154/329 (46%), Gaps = 27/329 (8%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
SLP L + R ++ L +P+ K+E +++T + I + + T + S
Sbjct: 19 SLPVDLANAEQRKTALSNFLEGGFPTIKNEDWKYTSVNKIVNIPYELTTTSTGSFTQKEL 78
Query: 126 AQFPSLVLIDGFIQ---NSALN--LSNLPDGVYVGSLLGVSDGIMKRVSD--FISEFQCG 178
+QFP +D + Q N N LSN P ++ +SD K +++ F + +
Sbjct: 79 SQFP-FTNLDVYYQVFINGHYNARLSNFPSTENGLTISHLSDPAAKELANKYFNTVAKND 137
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK-KLPISNPRVVVLVEE 237
F S+N D +I++ G ++ P++L +++ DS+ + P+ PR +++ E+
Sbjct: 138 SGFASLNTALTTDGTLIHLSPGKNLDKPLFLVFIA------DSRIETPLIQPRNIIVAEK 191
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA---VRQ 294
E+ ++E F+ G + NS+ EV+ G+ + ++ + + N H+ T +R
Sbjct: 192 NNELQLVELFLSI-GENQSLTNSITEVLCGENAHIDYTKIHLEGDNNYHVATTQFELLRD 250
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--P 352
+ S + L S G R+N++ + L+ +L Q D H+ L+DH P
Sbjct: 251 ASVSSHTL---SIDGGFIRNNLNFVLKDKNCNVLLNGIYLPNRQQFMDNHT--LVDHASP 305
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Y +L+K IV S G AVF+G + V R
Sbjct: 306 ECYSNELYKGIVNDS-GTAVFNGKIMVRR 333
>gi|381151144|ref|ZP_09863013.1| FeS assembly protein SufD [Methylomicrobium album BG8]
gi|380883116|gb|EIC28993.1| FeS assembly protein SufD [Methylomicrobium album BG8]
Length = 440
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 148/325 (45%), Gaps = 34/325 (10%)
Query: 71 LPLQKLRDSSSQTLLSTP-WPSRKDEPFRFTDTSMIKSSQIQP-ITRPSSSLDVSTDAQF 128
LP K R + L + +PS ++E +R+T+ S I+ P ++ P+S++D + +
Sbjct: 25 LPWLKQRRHDALALFAAGGFPSLREEEWRYTNVSAIEKKLFSPLLSAPASAVDQAWIDSY 84
Query: 129 P-----SLVLIDGFIQNSALNLSNLPDGVYVGSLLG--------VSDGIMKRVSDFISEF 175
S+VL++G +L++LP+ V V S+ V + K V+D F
Sbjct: 85 RLQDAWSIVLLNGRFSAELSSLASLPNDVLVLSMADALRQYSERVEEHFGKAVADSEHGF 144
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
+ W +G+ +++PA + P+ L ++ E ++ R +++V
Sbjct: 145 VAFNTAWFSDGL------FVHIPAKQVLAKPLQLLHVVTESD-------ALATTRNLIVV 191
Query: 236 EEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + ++E ++G DC Y A SV EV +G ++ LQ +S A H T V Q
Sbjct: 192 DPMAQAEVVETYIGA---DCAYLAASVNEVFVGANAELALYKLQAESAKAYHFGGTYVAQ 248
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 354
+ + + GG L+R ++H L +E L+ ++ Q D H+R+ P
Sbjct: 249 ARDARFAHHHYAFGGLLARSDIHA-DLDLASECILNGLYVGDKRQHIDNHTRINHLKPHA 307
Query: 355 YCRQLHKCIVAHSLGQAVFDGNVKV 379
R+L+K ++ + VF G V V
Sbjct: 308 TSRELYKGVL-DDRARGVFQGRVIV 331
>gi|420149517|ref|ZP_14656693.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|394753740|gb|EJF37247.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 335 str.
F0486]
Length = 433
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 33/326 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ +PI ++ L
Sbjct: 21 LKDIRKGALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWRPIYNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCG 178
A LV ++G+ + S+ L+ GV V LL + + K FI ++ + G
Sbjct: 81 ADCYQLVFVNGYYCPEMSSKELT----GVTVTPLL---EALHKGGEAFIKKYFNANTEKG 133
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N A + I VP G V+ PI L Y + D K+ PR ++ V E
Sbjct: 134 DVFTALNTAFASEGIYIEVPKGRVVDKPIQLLYFN------DRKETTCYQPRNIIAVGEN 187
Query: 239 GEVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
++ +IE V + +D A N+V E + K + + LQN SL A+ I T + QE
Sbjct: 188 AQLKVIE--VHQNLSDISTAILTNAVTEAFVAKDAFLDYYKLQNDSLTASLIDNTYISQE 245
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S + S GG L+R+N++ G E+ L +L + Q D ++ + +P
Sbjct: 246 ANSHASVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILKATQHTDHYTLVNHAYPNCE 305
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q +K IV + VF+G + V +
Sbjct: 306 SHQDYKSIV-NDEATNVFNGKIMVEQ 330
>gi|46445825|ref|YP_007190.1| sufD [Candidatus Protochlamydia amoebophila UWE25]
gi|46399466|emb|CAF22915.1| putative sufD [Candidatus Protochlamydia amoebophila UWE25]
Length = 450
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 19/326 (5%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-----PITRPSSSL 120
++ Q PLQK R + L P+++ E +R+ + S + IT+ +
Sbjct: 34 AINQGDPLQKARQKAWSQFLERGLPTKQSEAYRYIKLRHLFSQNYEFPKEESITKDQIAS 93
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCG 178
V + Q LV I+G + NLP V + +L + +++ S+ +
Sbjct: 94 LVYPECQHSFLVFINGQFCSEFSETKNLPSQVIISTLQEANQTFGTFFNNYWSKSLKEEN 153
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D F IN IY+P VE PI + +L G +L + PR+ V V
Sbjct: 154 DSFALINSALHHQGAFIYIPPKTIVETPIQILHLVQAQG-----QLLMLMPRINVCVGAQ 208
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS-LNAAHIKWTAVRQETA 297
EV + K N Y+ N V + ++ V ++ + N+ + A H + +
Sbjct: 209 AEVKFVSSIHQKSMNG-YFINQVTDFLVEDQAYVHYTQILNEEHVQAWHFEAVRAHLKKQ 267
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S ++ V ++ GG R++ H+ G + E L+ +L + +++H+ + +DH CR
Sbjct: 268 STFKTVCITEGGMTVRNDYHISLSGENAEVLLNGISML--EDKREVHTHIFIDHQAPNCR 325
Query: 358 --QLHKCIVAHSLGQAVFDGNVKVNR 381
QL K ++ + ++ F+G + V +
Sbjct: 326 SYQLFKAVL-NDFSRSSFEGKIMVRQ 350
>gi|359395489|ref|ZP_09188541.1| UPF0051 protein slr [Halomonas boliviensis LC1]
gi|357969754|gb|EHJ92201.1| UPF0051 protein slr [Halomonas boliviensis LC1]
Length = 446
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 26/305 (8%)
Query: 89 WPSRKDEPFRFTDT--------SMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQN 140
+P+R+DE +++TD ++ ++ P + +++L + DA L +DG +
Sbjct: 41 FPTRRDEEWKYTDVRSIAQGSFALADDAEFSPAS--AAALTLPIDAY--RLTFVDGVFSS 96
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVP 198
+ ++ +LP V V L + V + D F ++N + V+ +
Sbjct: 97 ALSDVDSLPSSVQVLPLSKALAENHEAVGGPLGRLTGVDFSPFAALNTAFMEEGAVVRIA 156
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG--EVGIIEEFVGKEGNDCY 256
G VE PI L++LS G V +S+PRV LVE GG E +IE + G E
Sbjct: 157 PGTVVEKPILLQFLSRAGQPV------MSHPRV--LVEAGGRSEATLIEHYTG-ESEATN 207
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
+ N V E+++ +G + H LQ L H+ V Q + Y +S GG L R+++
Sbjct: 208 FTNVVGELMLDRGAILAHYKLQEAPLGDMHVASIHVEQSRDTRYTSYNLSLGGGLVRNDL 267
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGN 376
G ET Q D H+++ + P + + +K I+ VF+G
Sbjct: 268 ISDLNGQGAETNFLGLFFGQGRQHVDNHTKVNHNAPLTFSNENYKGIL-DDRAHGVFNGK 326
Query: 377 VKVNR 381
V V R
Sbjct: 327 VYVKR 331
>gi|408490462|ref|YP_006866831.1| cysteine desulfurase activator complex protein SufD [Psychroflexus
torquis ATCC 700755]
gi|408467737|gb|AFU68081.1| cysteine desulfurase activator complex protein SufD [Psychroflexus
torquis ATCC 700755]
Length = 437
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 153/343 (44%), Gaps = 22/343 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L E L S + + + +R+ + + ST +P++K E +++T + +
Sbjct: 1 MELKEKLMSSYLAFEEQVDMENDIHSVRNKAIKFFESTGFPTKKMEAWKYTSLNSVLKED 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLS--NLPDGVYVGSLLGV 160
+ ++D D ++V IDG I +S L+ + + D + S L
Sbjct: 61 YSIFPKKEDAIDYKDIKKYLIHDIDTYTIVFIDG-IYSSHLSRTTHDKLDACLMSSALNK 119
Query: 161 SDGIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
S K + D + ++ + S+N A + I +P E PI + L+ GN
Sbjct: 120 SK--YKPIMDKYFNKIVPEESMSSLNTAFAKEGAYIRIPKNVSAEKPIQI--LNFSTGNE 175
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + PR +++ EEG V IIE N NSV EV +GK +V + +QN
Sbjct: 176 SALMI---QPRNLIIAEEGAHVQIIERHQSLTDNPV-LTNSVTEVYVGKNAEVDYYKIQN 231
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
++ I T ++QE S L S GGK++R+N+ Q G + + L +L Q
Sbjct: 232 DKTTSSLIDNTFIKQERDSTCSLHTFSLGGKITRNNLRFYQHGENCNSILKGVTILEGKQ 291
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAH-SLGQAVFDGNVKVNR 381
D ++ + P Q +K I + S+G VF+G++ V+R
Sbjct: 292 HVDHNTLVHHIEPNCESHQDYKGIFSEKSVG--VFNGSILVDR 332
>gi|315225486|ref|ZP_07867299.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
gi|420159751|ref|ZP_14666549.1| FeS assembly protein SufD [Capnocytophaga ochracea str. Holt 25]
gi|314944584|gb|EFS96620.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
gi|394761802|gb|EJF44130.1| FeS assembly protein SufD [Capnocytophaga ochracea str. Holt 25]
Length = 433
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 33/326 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCG 178
A LV ++G+ + S+ L GV V LL + + K FI ++ + G
Sbjct: 81 ADCYQLVFVNGYYCPEMSSKELI----GVTVTPLL---EALHKGGEAFIKKYFNTNTEKG 133
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N A + I VP G V PI L Y + D K+ PR ++ V E
Sbjct: 134 DIFTALNTAFASEGIYIEVPKGKVVNKPIQLLYFN------DRKETTCYQPRNIIAVGEN 187
Query: 239 GEVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
++ +IE V + +D A N+V EV + K + + LQN SL A+ I T + QE
Sbjct: 188 AQLKVIE--VHQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDSLTASLIDNTYISQE 245
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S + S GG L+R+N++ E+ L +L + Q D ++ + +P
Sbjct: 246 ANSHASVHTFSFGGTLTRNNLNFYHQDEHLESTLKGLSILKATQHTDHYTLVNHAYPNCE 305
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q +K IV+ VF+G + V +
Sbjct: 306 SHQDYKSIVSDE-ATNVFNGKIMVEQ 330
>gi|448746842|ref|ZP_21728507.1| SUF system FeS cluster assembly, SufD [Halomonas titanicae BH1]
gi|445565770|gb|ELY21879.1| SUF system FeS cluster assembly, SufD [Halomonas titanicae BH1]
Length = 446
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 27/341 (7%)
Query: 54 ESLEDSLPSSSSSL-PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK------ 106
++ D+L + SS+ +P + R + + + +P+R+DE +++TD I
Sbjct: 5 QTFLDTLKARSSNYTAEPTWIAARRQAGAARFEALGFPTRRDEEWKYTDVRSIAQGNFAI 64
Query: 107 --SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+++ P T +++L + DA L +DG ++ +L +LP V V L
Sbjct: 65 ADNAEFSPAT--AAALTLPIDAY--RLTFVDGVFSSALSDLDSLPSSVQVLPLSKALAEN 120
Query: 165 MKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ V + D F ++N + V+ + G VE PI L++LS G V
Sbjct: 121 HEAVGGPLGRLIGVDFSPFAALNTAFMEEGAVVRIAPGTVVEKPILLQFLSRAGQPV--- 177
Query: 223 KLPISNPRVVVLVEEGG--EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ +PRV LVE GG E +IE + G E + N V E+++ +G + H LQ
Sbjct: 178 ---MCHPRV--LVEAGGRSEATLIEHYTG-ESEAANFTNVVGELMLDRGAILAHYKLQEA 231
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
L H+ V Q + Y +S GG L R+++ G ET Q
Sbjct: 232 PLGDLHVASIHVEQGRDTRYTSYNLSLGGALVRNDLISDLNGQGAETNFLGLFFGQGRQH 291
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+++ + P + + +K I+ VF+G V V R
Sbjct: 292 VDNHTKVNHNAPLTFSNENYKGIL-DDRAHGVFNGKVYVKR 331
>gi|170743212|ref|YP_001771867.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
gi|168197486|gb|ACA19433.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
Length = 439
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 31/319 (9%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ------------PITRPSSSLDVST 124
R+ + + + P R+ E F+++D I R V
Sbjct: 33 REEAFRFFEAAGLPHRRVEAFKYSDLRAALREAAAPAEPPSPEAARTAIVRAEGFATV-- 90
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVSDGIMKRVSDFISEFQCGDL-FW 182
+ L ++G + + +L +PDGV V L+ ++DG ++F Q D +
Sbjct: 91 --EAARLTFVNGHLVPALSDLGAMPDGVEVVPLVEALTDG-HALTAEFTPVAQARDNPIY 147
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N D +I V AG + E P++L+++ G S + R +V++E G +
Sbjct: 148 QLNTAFMADGALIRVTAGARPERPLHLRFVGT-GAEAFS-----TATRTLVVLEGGAALT 201
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E G +G Y N L+ V+G G +RH+ L + A + +V+ S E
Sbjct: 202 LVESHEGPDGVG-YQPNDALDAVVGDGATLRHARLNREGGGAVALSTLSVKLGAKSHLET 260
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLH 360
V V+TG +RH + + G + +++ +L Q D S LL DH P G R+
Sbjct: 261 VNVATGAAFARHQIFLLFAGAEATAQVNGATMLKDGQLGD--STLLADHAAPGGISREQF 318
Query: 361 KCIVAHSLGQAVFDGNVKV 379
K ++ VF G + V
Sbjct: 319 KTVIDGD-ATGVFQGKIIV 336
>gi|384440330|ref|YP_005655054.1| SufD protein (Membrane protein) [Thermus sp. CCB_US3_UF1]
gi|359291463|gb|AEV16980.1| SufD protein (Membrane protein) [Thermus sp. CCB_US3_UF1]
Length = 431
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 159/340 (46%), Gaps = 34/340 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + S +L +PL L + R + + L P+PS+K+E +R+TD S ++ Q + P
Sbjct: 9 LEAISQALSEPLWLLEKRLKALEAFLRLPYPSKKEENWRYTDLS--EAPLEQEVEAPRG- 65
Query: 120 LDVSTDAQFPSLVL-------IDGFIQNSALNL--SNLPDGVYVGSLL--GVSDGIM--- 165
L +S DA P V + GF+ +L + +P+ + L+ +++ +
Sbjct: 66 LKLSRDA-LPEAVRRRLEKTDVSGFLVFVGPDLVYAEVPEELLAKGLVFTSLAEALKTHP 124
Query: 166 -KRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
K S D F ++N +YVPAG +VE P+ + + +EGG
Sbjct: 125 HKVESALFQGVYTEDKFAALNAAFFTHGAFLYVPAGLEVEKPLGVFKVLLEGGKA----- 179
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
S R ++ +E+ + IEE++ + + ++ E+++ G ++RH+++Q
Sbjct: 180 --SAGRSLLFLEDNAKAAYIEEYLSPDLSPTLHLSAT-EMLLRPGARLRHAHVQTFGEGV 236
Query: 285 AHI-KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
H + A+ + A+ +LV V+ GG+ +R V + LGP E+E+ + Q D
Sbjct: 237 WHFHRQRALLERDAALNDLV-VNLGGRYARSEVASELLGPGGESEMLGLYFGHGRQQFDH 295
Query: 344 HSRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNVKVNR 381
++ L H + R L+K V +AVF G +K+ R
Sbjct: 296 YT--LQHHVEHHTRSDLLYKGAVKDE-ARAVFSGLIKLER 332
>gi|220925675|ref|YP_002500977.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
gi|219950282|gb|ACL60674.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
Length = 439
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 21/316 (6%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQPITRPSSSLDVSTDAQ-FPS--- 130
R+ + + +T P R+ E F+++D ++ +++ P ++ + A+ F +
Sbjct: 33 REEAFRFFEATGLPHRRVEAFKYSDLRAALREAAPPAEAPTPEAARNAVMKAEGFATIEA 92
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL-FWSINGM 187
L ++G + + +L +P+GV V L+ F Q + + +N
Sbjct: 93 ARLTFVNGHLVPALSDLGAMPEGVEVTPLVEALTNGHPLTEQFTPVAQARENPIFQLNIA 152
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
D +I V AG KVE P++L+++ G S + R++V++EEG E+ + E
Sbjct: 153 FMADGALIRVAAGAKVERPLHLRFVGT-GAEAFS-----TATRILVVLEEGAELTLFESH 206
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 307
G +G Y N L+ VI G +RH+ L + A + +V+ + E V V
Sbjct: 207 EGPDGV-AYQPNDALDAVIADGATLRHTRLNREGREAIALSTLSVKLGAKAHLETVNVVA 265
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKCIVA 365
G SRH +++ G D ++ +L + Q D S LL DH G+ R+ K ++
Sbjct: 266 GAAFSRHQLYLLFAGEDATATVNGATMLGNGQLGD--STLLADHAATGGFSREQFKTVI- 322
Query: 366 HSLGQAVFDGNVKVNR 381
VF G + V +
Sbjct: 323 DGEATGVFQGKIIVEQ 338
>gi|440230704|ref|YP_007344497.1| Iron-regulated ABC transporter permease protein SufD [Serratia
marcescens FGI94]
gi|440052409|gb|AGB82312.1| Iron-regulated ABC transporter permease protein SufD [Serratia
marcescens FGI94]
Length = 424
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 25/304 (8%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q L WP+RK E +++T + + Q + S + + P LV +DG
Sbjct: 36 QQALRLGWPTRKHENWKYTPLDGLLAQQFHAPQPATVSAERCAELALPLDAYRLVFVDGR 95
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
Q +LS+ G Y L G + E ++F + AP+ +I +
Sbjct: 96 YQ---ADLSDADLGDYQLELTGYQ----------LPEPIQPEIFLHLTESLAPESSLIRL 142
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
PAG P+YL L + G + ++ + R + V G + +IE +V ++
Sbjct: 143 PAGKVAARPLYL--LHISSGRSGAGEINSVHHRHHLEVAAGAQAEVIEHYVSL-NEHAHF 199
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ L +G ++ H L ++ + H ++ + + G L+RHN
Sbjct: 200 TGARLTATVGDNAQLHHCKLAFENQPSYHFAHNDLKIGRDARVKSDSFLLGAGLTRHNTS 259
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G +L+S L V + D +R L+H +GYC RQLHK +V+ +AVF+G
Sbjct: 260 AQLNGEGANLQLNSLVLPVGKEICD--TRSYLEHNKGYCESRQLHKTVVS-DRARAVFNG 316
Query: 376 NVKV 379
+KV
Sbjct: 317 MIKV 320
>gi|373459363|ref|ZP_09551130.1| FeS assembly protein SufD [Caldithrix abyssi DSM 13497]
gi|371721027|gb|EHO42798.1| FeS assembly protein SufD [Caldithrix abyssi DSM 13497]
Length = 441
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 156/324 (48%), Gaps = 26/324 (8%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS-SSLDVSTDAQF-- 128
PL ++R ++ + + + P+ +DE +RFT+ ++ + + + +L + F
Sbjct: 25 PLHQVRKAALEFVSQSGLPTSRDEEWRFTNPKPFFETEFRLAEKAAGEALSIEQIQPFLY 84
Query: 129 -----PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF----ISEFQCGD 179
+LV ++G+ ++ D V + SL ++ + + ++EF +
Sbjct: 85 NNFEGITLVFVNGYFMPHLSTMAESNDRVQISSLNHALSNKVELLPELNEKAVNEF---N 141
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F ++N D +I VP ++ PI + L++ G ++ I N V+ V E
Sbjct: 142 VFSALNAAFFSDGIIIEVPDHTVLKVPINV--LNIAMGQGETVNNVIRN---VIKVGEHS 196
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ +IE F+ ++ ++ N++ V + KV HS++QN++ NA H+ V+Q+ +S
Sbjct: 197 FLRVIETFLSF-SDEPHFTNALTVVSVSNHAKVIHSHIQNENENAYHVGNVLVQQKHSSR 255
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 357
Y ++ GGKL R+N+ + G + L+ F++ Q D H+ L++H C
Sbjct: 256 YVSNNITLGGKLVRNNLKITLQGEFADASLNGFYMAHGTQHHDNHT--LIEHASPNCTSN 313
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
+L++ I+A AVF G + V R
Sbjct: 314 ELYQGILA-DRASAVFAGKILVER 336
>gi|406941606|gb|EKD74053.1| hypothetical protein ACD_45C00096G0002 [uncultured bacterium]
Length = 417
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 32/317 (10%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR--PSSSLDVSTDA----QFPS--LVL 133
+ L+ P+R +E F++ D S + S + TR +++L DA + PS LVL
Sbjct: 16 EAFLAHGLPNRSNERFKYHDFSFLLKSALANATRLDETAALRECVDAHRLREKPSILLVL 75
Query: 134 IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF------QCGDLFWSINGM 187
++G+ + +L +PD V + D++ ++ Q F +N
Sbjct: 76 VNGYFVPALSDLERIPDDAIVTCI----HEARTLYPDWVEQYGSLPIDQTKYPFAELNAQ 131
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
D IY+ AGC + +PI+L LS+ G N ++ I+ P +++++ + +IEE+
Sbjct: 132 SYSDGLFIYLKAGCNLTDPIHL--LSI-GMNTEA---FIAQPHHIIVLDIASRLTLIEEY 185
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 307
V N ++ VV+ + H +QN+ +A H T ++Q+ S L S
Sbjct: 186 VSLHDAVSCLTNVLMNVVLKEKTFFNHCKIQNEQSSALHCSNTFIKQKKDSQSVLTHFSK 245
Query: 308 GGKLSRHN--VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCI 363
GG SR + V ++++G T +H Q + + + H CR L+K I
Sbjct: 246 GGVFSREDWMVLLEEMGASCMTA-GLYH--AKRNHQSVAHYVDIKHAAPACRSDMLYKGI 302
Query: 364 VAHSLGQAVFDGNVKVN 380
A +A+FDG + V+
Sbjct: 303 -ADKKSRAIFDGRLSVD 318
>gi|406915041|gb|EKD54168.1| hypothetical protein ACD_60C00119G0014 [uncultured bacterium]
Length = 418
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 136/314 (43%), Gaps = 14/314 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP--ITRPSSSLDVSTDAQFPS 130
L R SQ L WP++K+E F++T+ S P P + S A
Sbjct: 15 LDDFRLKQSQIFLKRGWPTKKEECFKYTEIKNTISENKNPHFTDLPERNYFFSEIAAI-R 73
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS-EFQCGDL-FWSINGMG 188
++ I+G+ N+ LP G+ + +L + + +++ EF F +N
Sbjct: 74 MIFINGYFVAHLSNVEKLPGGIAIYTLQKALEKKESIIQSYLTREFDEKRFPFAVLNASV 133
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D + + K PI+L ++ + +PR +V+ +V +IEE V
Sbjct: 134 MKDGMFLEISKNTKTSLPIHLVFIHTGEDHF------TIHPRNIVVARPDSKVILIEEHV 187
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
G E Y+ N+V ++ G+ + + +QN+S A H+ V Q S + ++ G
Sbjct: 188 G-ENAKHYFTNTVTDIHAGENASIEYYKIQNESHTATHVANVFVTQHRDSTLKTFFLAKG 246
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSD-QTQDLHSRLLLDHPRGYCRQLHKCIVAHS 367
KLSR ++ ++Q ++ F+ L D Q D H + P G +++ ++
Sbjct: 247 AKLSREDLTIKQKAIGAISDSYGFYFLNQDEQHIDHHVHVDHLAPEGKSTMVYRGVLDKK 306
Query: 368 LGQAVFDGNVKVNR 381
+AVF+G V V++
Sbjct: 307 -SRAVFNGKVFVDK 319
>gi|313675023|ref|YP_004053019.1| fes assembly protein sufd [Marivirga tractuosa DSM 4126]
gi|312941721|gb|ADR20911.1| FeS assembly protein SufD [Marivirga tractuosa DSM 4126]
Length = 441
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 150/347 (43%), Gaps = 27/347 (7%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F I ++ E SL S PL R + +P K E +++++ + +
Sbjct: 10 DKFFIGQFKAFESSLNGESKK-----PLHAKRKQAIDNFKELGFPHAKHEEYKYSNVAKM 64
Query: 106 --KSSQIQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGS 156
K + ++ S SL + +++ LV ++G + N ++ LP GV++ +
Sbjct: 65 FGKLFNVGNLSDDSFSLSLDEASKYFIPELDAIRLVFVNGVLDNKLSDMETLPKGVHIQA 124
Query: 157 LLGVSDGIMKRVSDFIS--EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
+ +D + + E + D F +N + + A VE PI Y +
Sbjct: 125 IKTAADDYAEDFEKHFNTHEIEGADNFSELNTAFTNGGVFVKIDANAVVETPIACYYFN- 183
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
+ N D IS PR +V+ ++ + +IE +V G + + N+V E+V+ +
Sbjct: 184 DAKNAD----VISQPRNLVIAKKNSQASLIESYVTL-GENTSFTNAVTEIVMEDDCVFNY 238
Query: 275 SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHL 334
QN+S A + T V Q S + V +S G + R+N++ +ET + +L
Sbjct: 239 YKYQNESDQAIQVGATMVHQLGKSVFNGVTLSLNGAMLRNNLNTAIHKEHSETNMYGLYL 298
Query: 335 LVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
L D+ + + ++DH P +++K I+ + VF+G + V
Sbjct: 299 L--DRKTHVDNHTVVDHKVPNCESNEMYKGIL-DGQSRGVFNGKIFV 342
>gi|238757750|ref|ZP_04618933.1| hypothetical protein yaldo0001_35070 [Yersinia aldovae ATCC 35236]
gi|238703993|gb|EEP96527.1| hypothetical protein yaldo0001_35070 [Yersinia aldovae ATCC 35236]
Length = 412
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 133/298 (44%), Gaps = 35/298 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS 146
TP S F F DT+ + ++Q +L + DA LV +DG A LS
Sbjct: 41 TPLESLLAHDFSFADTTTVTAAQ-------RDALSLVQDAH--RLVFVDG---RYAPELS 88
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENP 206
+ G Y L +SD + F + Q ++F + A + I +P G + P
Sbjct: 89 DCACGPY--QLTRLSDN-----AQFPAAIQ-SEVFLHLTESLAQESLHIRLPQGETSDKP 140
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
+YL L + GN D++ + S+ R +++E + +IE FV ++ + L + +
Sbjct: 141 LYL--LHISSGN-DAEAVNTSHYRHHLMIEPTAQAEVIEHFVSV-NEQPHFTGARLTIAV 196
Query: 267 GKGGKVRHSYLQNQS---LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 323
G ++ H L +S + AH R A Y + G L+RHN Q G
Sbjct: 197 GDNAELSHYKLAFESPRSYHFAHNDLVLGRDARARSYSFL---LGAGLTRHNTSAQLNGE 253
Query: 324 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
++S L + + D +R L+H +GYC RQLHK IV G+A+F+G +KV
Sbjct: 254 GATLSMNSLLLPIGREICD--TRTYLEHNKGYCESRQLHKVIV-RERGKAIFNGMIKV 308
>gi|339000118|ref|ZP_08638740.1| Fe-S cluster assembly protein SufD [Halomonas sp. TD01]
gi|338762993|gb|EGP18003.1| Fe-S cluster assembly protein SufD [Halomonas sp. TD01]
Length = 446
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 120/299 (40%), Gaps = 14/299 (4%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALN 144
+P+R+DE +++TD I S + P L +DG + +
Sbjct: 41 FPTRRDEEWKYTDVRTIAQGNFALAENADFSQAQAAALTLPLDAYRLTFVDGVFSAALSD 100
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCK 202
L LP V V L + V + D F ++N + V+ + G
Sbjct: 101 LEALPSSVQVMPLSKALADNHEAVGGPLGRLTGVDFSPFAALNTAFMEEGAVVRIAPGTV 160
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
VE PI L+++S G V + +PR++V E +IE +VG E + N V
Sbjct: 161 VEKPILLQFMSRAGTPV------MCHPRILVEAAGRSEATLIEHYVG-ETEAANFTNVVA 213
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
E+++ +G + H LQ L H+ V Q S Y ++ GG L R+++ G
Sbjct: 214 ELMLDRGAILNHYKLQEAPLGDMHVASIHVEQSRDSRYSSYNLNLGGALVRNDLISDLNG 273
Query: 323 PDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
ET Q D H+++ + P + + +K I+ VF+G V V R
Sbjct: 274 QGAETNFYGLFFGQGRQHIDNHTKVNHNAPLTFSNENYKGIL-DDRAHGVFNGKVYVKR 331
>gi|392398274|ref|YP_006434875.1| Iron-regulated ABC transporter permease protein SufD [Flexibacter
litoralis DSM 6794]
gi|390529352|gb|AFM05082.1| Iron-regulated ABC transporter permease protein SufD [Flexibacter
litoralis DSM 6794]
Length = 441
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 167/356 (46%), Gaps = 42/356 (11%)
Query: 41 QATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT 100
++TF PF +LAE + +++ + +L + L+ + + +P+ ++E ++FT
Sbjct: 9 KSTFLAPFE-ELAEQVSENINTDKLTLAKKTALEAIEEK--------EFPTTRNEEWKFT 59
Query: 101 DTSMIKSSQIQPITRP---SSSLDVS-------TDAQFPS--LVLIDGFIQNSALNLSNL 148
D + S+ + ++ +S+LD++ ++ + S LV I+G+ ++ L
Sbjct: 60 DIKSVISNNFELQSKEGSENSTLDLNELDYYLNSNKELDSHILVFINGYFSEKHSSIKAL 119
Query: 149 PDGVYVGSLLGV---SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVEN 205
D + + +L + S K SD +S +F IN APD VI + ++E
Sbjct: 120 NDKISIKTLSNIEANSSIFDKFESDSVS------IFSDINTAFAPDGYVIELADNQELEL 173
Query: 206 PIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
P+++ ++ N S+K +S R + V E ++E ++ K G + N V +
Sbjct: 174 PVFVYFV-----NDASQKNTLSQVRNYISVGENSRCTVVENYITK-GENPNLVNIVTSIN 227
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
+ K V+H +Q + + + T +Q S + +S GKL R+++ + G
Sbjct: 228 VEKYANVKHLKIQADAKSQFQVGSTHAKQADNSSFTNTTISLAGKLIRNDLRIIS-GEHC 286
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
E+ ++ +LL D H+ ++DH P Y +++K ++ +AVF+G + V
Sbjct: 287 ESYMNGLYLLNEKTHVDNHT--VIDHQRPNSYSNEMYKGVL-DGKSRAVFNGKIFV 339
>gi|416112189|ref|ZP_11593154.1| FeS assembly protein SufD [Riemerella anatipestifer RA-YM]
gi|442314164|ref|YP_007355467.1| hypothetical protein G148_0468 [Riemerella anatipestifer RA-CH-2]
gi|315022125|gb|EFT35154.1| FeS assembly protein SufD [Riemerella anatipestifer RA-YM]
gi|441483087|gb|AGC39773.1| hypothetical protein G148_0468 [Riemerella anatipestifer RA-CH-2]
Length = 427
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 157/340 (46%), Gaps = 30/340 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
SL +++ + SSS PL KL ++ + LS +PS+KDE +++T+ I Q Q +
Sbjct: 2 SLVENIKTHSSS---PLSGDKL--NALERFLSKGFPSKKDEEYKYTNLKEIIEKQYQFL- 55
Query: 115 RPSSSLDVSTDA---------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL---GVSD 162
P +S + F +VL++G ++ +S+ V + G ++
Sbjct: 56 -PQEEHHISEEELKALRLGGEDFDWVVLVNGKLRPELSKISDKDIKVLALDEVLSSGENE 114
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDS 221
+ + + IS F ++N + LGV +YVP VE PI++ Y+S +
Sbjct: 115 ALFRPYFNTISNESWA--FPNLN-LAFAHLGVALYVPKNTVVEKPIHIFYISQ-----NQ 166
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ NPR +++VE G ++ +IE + + + NS+ E+ K LQN +
Sbjct: 167 SENTFYNPRNILVVEAGSQIEVIESHHNFDTSFTF-TNSLTEIFTKPNAKADWHKLQNDT 225
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
+ + T V+QE S + S GGKL R+N+ Q G + + ++ ++ DQ
Sbjct: 226 DTSYLVDHTFVKQERDSLATVNTFSFGGKLVRNNLDFIQEGENINSFMNGITIIGKDQLV 285
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + + P Q +K + + VF+G V V++
Sbjct: 286 DHHTAVHHNQPNCESYQNYKGVFKDN-AHGVFNGKVFVDK 324
>gi|85817042|gb|EAQ38226.1| FeS assembly protein SufD [Dokdonia donghaensis MED134]
Length = 437
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 151/340 (44%), Gaps = 22/340 (6%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+D L S+ L + + P+ +R+ + +T + +P++K E +++T + I
Sbjct: 2 SLKDKLVSNHIVLQESIDADSPIYGIRNEAIKTFEAEGFPTKKLENWKYTSLNSILKEDY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSD 162
++LD Q+ +V +DG + +S L+ DG+ V ++ ++
Sbjct: 62 NIFPSKEAALDFKDVKQYFLNDIDTYKIVFVDG-VYSSYLS-ETTHDGIDVCTMGAALTK 119
Query: 163 GIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
K+V D + ++ G+ ++N A D IY+P G + PI + + S G D+
Sbjct: 120 PKYKQVIDVYFNKIAKGESMDALNTAYAKDGAYIYIPKGKVAQKPIQIVHFST--GTNDA 177
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
L PR +++ EE EV IIE N V E+ K V + +QN
Sbjct: 178 MMLQ---PRNLIVAEENSEVQIIERHQSLSEKKV-LTNVVTEIFADKRALVDYYKIQNDK 233
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
L+A+ I T + Q S + S GG ++R+N++ Q G ++ L ++ Q
Sbjct: 234 LDASLIDTTEIEQHKESIVSVHTFSLGGNITRNNLNFYQKGEYMDSILKGVTIIEGKQHV 293
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K I A VF+G V V +
Sbjct: 294 DHNTLVHHITPNCESHQDYKGIFAEK-STGVFNGKVVVEK 332
>gi|88799896|ref|ZP_01115468.1| Cysteine desulfurase activator SufB [Reinekea blandensis MED297]
gi|88777327|gb|EAR08530.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
Length = 429
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 148/326 (45%), Gaps = 23/326 (7%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT---DTSMIKSSQIQPITRPSS 118
S + +P LQ+ + + TPWP+RK E +++T + I S +P T +
Sbjct: 12 SKQEAWSRPQWLQQWQQAGLDRFRETPWPTRKTEHWKYTPLKSLTGIDWSLPEPKTSVAD 71
Query: 119 SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
+ D L +++G +QN +LP GV SL+ +S+ ++ F++ +
Sbjct: 72 GIRFD-DWNAIRLNIVNGELQNPG----DLPTGV---SLVRLSECNQEQAERFLAALEAS 123
Query: 179 D---LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
LF + N D + V +V+ ++L Y++ +G +V +S+ ++ + +
Sbjct: 124 RNDFLFDTANQAFIQDAYWLNVDPNTQVQQALHLNYVT-DGDDV------LSSSQIWINL 176
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
G +V ++E F E C N+ + + ++ H +L + +A HI +
Sbjct: 177 GVGAQVTVVETFSAGEQGRCL-VNANTAITLADNARMTHYHLMLEEGDAHHIGRVTAELQ 235
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
++ + V GG L R ++ V+ G E L+ +L + D H+ + + P
Sbjct: 236 RSAYLDSFHVGIGGVLKRKDIRVRHCGEGAELRLNGVYLPKGAEIIDYHTCIEHEVPHCT 295
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKVNR 381
++ + I++ S +AVF+G + +++
Sbjct: 296 SEEIFRGIISDS-AKAVFNGRIHIHK 320
>gi|332292133|ref|YP_004430742.1| FeS assembly protein SufD [Krokinobacter sp. 4H-3-7-5]
gi|332170219|gb|AEE19474.1| FeS assembly protein SufD [Krokinobacter sp. 4H-3-7-5]
Length = 437
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 152/341 (44%), Gaps = 24/341 (7%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+D L S+ L + + P+ +R+ + +T + +P++K E +++T + I
Sbjct: 2 SLKDKLVSNHIVLQESIDADSPIYDIRNEAIKTFEAEGFPTKKLENWKYTSLNSILKEDY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSD 162
++LD Q+ +V +DG S+ DG+ V ++ +S
Sbjct: 62 NIFPSKEAALDFKDVKQYFLNDVDTYKIVFVDGVY--SSFLSETTHDGIDVCTMGAALSK 119
Query: 163 GIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
K+V D + ++ G+ S+N A D IY+P G + PI + + + G N
Sbjct: 120 PKYKQVIDVYFNKIAKGESMDSLNTAFAKDGAYIYIPKGKVAQKPIQIVHFAT-GAN--- 175
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ + PR +++ EE EV IIE N V E+ K V + +QN +
Sbjct: 176 -EAMMLQPRNLIVAEENSEVQIIERHQSLTDKKV-LTNVVTEIFADKRALVDYYKIQNDN 233
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
L+A+ + T + Q S + S GG ++R+N++ Q G ++ L ++ Q
Sbjct: 234 LSASLVDTTEIEQHKESIVSVHTFSLGGNITRNNLNFYQKGEYMDSILKGITIIEGKQHV 293
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 381
D ++ + P Q +K I A S+G VF+G V V +
Sbjct: 294 DHNTLVHHITPNCESHQDYKGIFADKSVG--VFNGKVVVEK 332
>gi|429748337|ref|ZP_19281533.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 332 str.
F0381]
gi|429171246|gb|EKY12879.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 332 str.
F0381]
Length = 433
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 140/323 (43%), Gaps = 27/323 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCGDL 180
A LV ++G+ S S GV V LL + + K FI ++ + GD+
Sbjct: 81 ADCYLLVFVNGYY--SPEMSSKAIAGVTVTPLL---EALHKGGEAFIKKYFNTNTEKGDV 135
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++N A + I VP G V+ PI L Y + D + PR ++ V E +
Sbjct: 136 FTALNTAFASEGVYIEVPKGKVVDKPIQLLYFN------DGAETTCYQPRNIIAVGENAQ 189
Query: 241 VGIIE--EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+ +IE + V N+V EV + K + + LQN L A+ I T + QE S
Sbjct: 190 LKVIEIHQNVSNTAT-AILTNAVTEVFVAKDAFLDYYKLQNDRLTASLIDNTYISQEANS 248
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
+ S GG L+R+N++ G E+ L +L Q D ++ + HP Q
Sbjct: 249 HASVHTFSFGGTLTRNNLNFYHQGEYLESTLKGLSILKGSQHTDHYTLVNHAHPNCESHQ 308
Query: 359 LHKCIVAHSLGQAVFDGNVKVNR 381
+K IV + VF+G + V +
Sbjct: 309 DYKSIV-NDEATNVFNGKIMVEQ 330
>gi|319953155|ref|YP_004164422.1| iron-regulated ABC transporter permease protein sufd [Cellulophaga
algicola DSM 14237]
gi|319421815|gb|ADV48924.1| Iron-regulated ABC transporter permease protein SufD [Cellulophaga
algicola DSM 14237]
Length = 438
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 153/341 (44%), Gaps = 25/341 (7%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ ++R + + + +PS+KDE +++T + ++
Sbjct: 3 LKDKLISSFMAFENNVDVDHPVHEVRSEAMKNFETKGFPSKKDEAWKYTSLNGLQKIDFS 62
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLP-DGVYVGSLL-GVSD 162
+ ++L+ ++ +V IDG + NLS DGV + + ++
Sbjct: 63 IFPKEVNALEYREVKKYFINEIDTYKIVFIDGIFSS---NLSETTHDGVDICLMSSALNK 119
Query: 163 GIMKRVSD-FISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ K++ D + ++ D ++N + + IY+P + PI + + + GN
Sbjct: 120 PMYKQIIDVYFNKIASKDESLTTLNTAFSKEGAYIYIPKNKMPKKPIEILHFAT--GNEA 177
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
S L PR +++VEE EV IIE N+ N V E+ K V + +QN
Sbjct: 178 SLMLQ---PRNLIIVEEHAEVQIIERHQSLTSNEV-LTNCVTEIFAAKSAIVDYYKVQND 233
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
NA+ I T + Q+ S ++ S GGKL+R+N++ Q G ++ + +L Q
Sbjct: 234 DANASLIDNTYIDQKDKSDVKVHTFSFGGKLTRNNLNFYQNGEYIDSTMKGVTILGDKQH 293
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + P Q +K I S VF+G + V +
Sbjct: 294 VDHHTLVHHIEPNCESHQDYKGIYNDS-STGVFNGKIIVEK 333
>gi|335419037|ref|ZP_08550095.1| FeS assembly protein SufD [Salinisphaera shabanensis E1L3A]
gi|334897172|gb|EGM35308.1| FeS assembly protein SufD [Salinisphaera shabanensis E1L3A]
Length = 442
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 153/348 (43%), Gaps = 33/348 (9%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D ++ + A +E LP S ++ Q+ R + + T +P + E +++T +
Sbjct: 9 DHYLAEYAR-IERDLPGSDAN-------QRARKDALKAFTDTGFPDTRQEDWKYTSLRPL 60
Query: 106 K------SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG 159
+ SS+ ++ + + D + +V++DG L LP+GV V S
Sbjct: 61 EKRRFEISSEAGDVSEKELAAFLPADLEAYRIVIVDGHFSPRLSALDGLPEGVVVQSFAE 120
Query: 160 -VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ + RV E Q G L +N A D ++V A + PI++ LS GG+
Sbjct: 121 YLRNNDDARVKASAIESQPGSL-SDMNAAFATDGAYVHVAANAAADKPIHVITLS-SGGH 178
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ +S R +++ + +IE +VG G+ Y+ N V E V+G+ ++ +Q
Sbjct: 179 EER----MSQLRHRYVMDPSSQATVIEHYVGL-GDKPYFTNVVTEAVMGQNAQLTRCRVQ 233
Query: 279 NQSLNAAHIKWTAVRQETAS-----GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFH 333
+S H Q S G++L GG+L+R + + + + P+ E +
Sbjct: 234 QESDRGYHTASFFAHQTRDSRVFNHGFDL-----GGRLARTDTNTRLVDPNAEVHFYGVY 288
Query: 334 LLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ Q D H+ + D R+++K ++A G+ VF+G + + +
Sbjct: 289 IPTGRQHMDNHTCVDHDTEHSVSREIYKGVLAEH-GRGVFNGKILIRK 335
>gi|213962936|ref|ZP_03391196.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
gi|213954593|gb|EEB65915.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
Length = 433
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 144/326 (44%), Gaps = 33/326 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LNDIRKEALSFFAEKGFPHKKVEAWKYTSLSDLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFI-------QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
A LV ++G+ + + +S L + ++ G + +K+ F + + G
Sbjct: 81 ADCYQLVFVNGYYCPEMSSKEIAGATISPLLEALHKGG-----EAFIKKY--FNTNTEKG 133
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N + I VP G V+ PI L Y + D K+ PR ++ V E
Sbjct: 134 DIFTALNTAFTSEGLYIEVPKGKVVDKPIQLLYFN------DRKETTCYQPRNIIAVGEN 187
Query: 239 GEVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
++ +IE V + +D A N+V E + K + + LQN SL+A+ I T + QE
Sbjct: 188 AQLKVIE--VHQNLSDTATAILTNAVTEAFVAKEAFLDYYKLQNDSLSASLIDNTYISQE 245
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S + S GG L+R+N++ G E+ L +L Q D ++ + +P
Sbjct: 246 ANSHASVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILKGSQHTDHYTLVNHAYPNCE 305
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q +K IV+ VF+G + V +
Sbjct: 306 SHQDYKSIVSDE-ATNVFNGKIMVEQ 330
>gi|344202783|ref|YP_004787926.1| FeS assembly protein SufD [Muricauda ruestringensis DSM 13258]
gi|343954705|gb|AEM70504.1| FeS assembly protein SufD [Muricauda ruestringensis DSM 13258]
Length = 440
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 151/342 (44%), Gaps = 19/342 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + L P+ + R+++ + + +P++KDE +++T ++
Sbjct: 3 MDLKEKLVSSFLAFEDGLDLDHPVHEERNNAIKNFETKGFPTKKDEAWKYTSLRGLQKVD 62
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ ++L+ ++ +V +DG + +S L+ DGV V + S
Sbjct: 63 FSIFPKQETTLEYKDVKKYFLHEIDTYKIVFVDG-VYSSYLS-ETTHDGVDVCLMSSAFS 120
Query: 162 DGIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+ ++V + F + S+N + IY+P + PI + +L+ GN
Sbjct: 121 KPMFQQVIEVYFNKAASKDESLTSLNTAFCKEGAYIYIPKNKMPKKPIQILHLAT--GNE 178
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ L PR +++ E+ EV IIE GN+ + NSV E+ GK V + +QN
Sbjct: 179 AALML---QPRNLIVAEDNAEVQIIERHQSLTGNEVF-TNSVTEIFAGKDAIVDYYKVQN 234
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
A+ + T + Q+ +S + S GGKL R+N++ Q G ++ L +L Q
Sbjct: 235 DESTASLVDNTYISQKNSSVVRVHTFSLGGKLIRNNLNFYQNGERIDSTLKGITILGDKQ 294
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + P Q +K I VF+G + V++
Sbjct: 295 HVDHHTLVHHAQPNCESHQDYKGIFGDG-STGVFNGKIVVDK 335
>gi|238749442|ref|ZP_04610947.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
gi|238712097|gb|EEQ04310.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
Length = 407
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 35/298 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS 146
TP F F DT+++ ++Q L + DA LV IDG A LS
Sbjct: 36 TPLERLLAHNFSFADTAVVTAAQ-------RDQLSLVQDAH--RLVFIDG---RYAPELS 83
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENP 206
+ G Y + L + I + ++F + A + I +PAG + P
Sbjct: 84 DNECGPYQLTPLTENTPIPAAIQ--------SEVFLHLTESLAQEALHIRLPAGKHSDKP 135
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
+YL ++S G ++ + S+ R + +E G + +IE FV ++ ++ + L + +
Sbjct: 136 LYLLHISSGKG---TEVVNTSHYRHHLAIESGAQAEVIEHFVSL-NDEAHFTGARLTLAV 191
Query: 267 GKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 323
G ++ H L + S + AH R A Y + G L+RHN Q G
Sbjct: 192 GDNAELNHCKLAFETPHSYHFAHNDLVLSRDARARSYSFL---LGAGLTRHNTSAQLNGE 248
Query: 324 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
++S L V + D +R L+H +GYC RQLHK IV G+A+F+G +KV
Sbjct: 249 GATLSINSLLLPVGREICD--TRTYLEHNKGYCESRQLHKTIVRER-GKAIFNGMIKV 303
>gi|347760112|ref|YP_004867673.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
xylinus NBRC 3288]
gi|347579082|dbj|BAK83303.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
xylinus NBRC 3288]
Length = 423
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 24/252 (9%)
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD 191
V ++G+ + S LP GV V + ++G R+ D I GD+ ++N + A D
Sbjct: 92 VFVNGYFDAAR---SRLPTGVRVSAF--AAEG---RIDDDIDP--TGDVTTALNTVLAHD 141
Query: 192 LGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGK 250
V+ VP G + L ++V G P+S +PR ++VE+GG + +++ VG
Sbjct: 142 GLVLVVPEGVDA-GCLLLASIAVAG------DAPVSIHPRHTIVVEKGGRLALLDASVG- 193
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
+G+ Y N + ++ +G+ G + H+ +Q + A H+ + R Y+ ++ GG
Sbjct: 194 QGD--YLHNPLYDITVGEDGHLSHARVQAEGDQAIHLAVSHARIAATGLYDSFTLTLGGS 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLG 369
LSRH VH + P ++ LL Q DL S + P RQ K +++ H+ G
Sbjct: 252 LSRHEVHARLTAPRACVHVNGAQLLGGRQHGDLTSVITHAAPECTSRQTVKNVLSDHARG 311
Query: 370 QAVFDGNVKVNR 381
VF G + V R
Sbjct: 312 --VFQGKIHVER 321
>gi|313206630|ref|YP_004045807.1| fes assembly protein sufd [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|383485936|ref|YP_005394848.1| fes assembly protein sufd [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|386321386|ref|YP_006017548.1| Fe-S cluster assembly ABC transporter permease [Riemerella
anatipestifer RA-GD]
gi|312445946|gb|ADQ82301.1| FeS assembly protein SufD [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|325335929|gb|ADZ12203.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Riemerella anatipestifer RA-GD]
gi|380460621|gb|AFD56305.1| fes assembly protein sufd [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
Length = 426
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 155/344 (45%), Gaps = 39/344 (11%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
SL +++ + SSSL + ++ + LS +PS+KDE +++T+ I Q Q +
Sbjct: 2 SLFENIKTHSSSLSGD------KLNALERFLSKGFPSKKDEEYKYTNLKEIIEKQYQFLP 55
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK--RVSDFI 172
+ + ++ + +L L + + L +G + L +SD +K + + +
Sbjct: 56 QEEHHI---SEEELKALRLGE-----EDFDWVVLVNGKWCPELSKISDKDIKVLALEEAL 107
Query: 173 SEFQCGDLF-----------WS---INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
S + G LF W+ +N A +YVP VE PI++ Y+S
Sbjct: 108 SNGENGALFRPYFNTIANESWAFPNLNLAFAHSGVALYVPKNTVVEKPIHIFYIS----- 162
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY-WANSVLEVVIGKGGKVRHSYL 277
+ + NPR +++VE G ++ +IE +D + + NS+ E+ K L
Sbjct: 163 QNQSENTFYNPRNILVVEAGSQIEVIES--HHNFDDSFTFTNSLTEIFTKPNAKADWHKL 220
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
QN + + + T V+QE S + S GGKL R+N+ Q G + + ++ ++
Sbjct: 221 QNDTDTSYLVDHTFVKQERDSLATVNTFSFGGKLVRNNLDFIQEGENINSFMNGITIIGK 280
Query: 338 DQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DQ D H+ + + P Q +K + + VF+G V V++
Sbjct: 281 DQLVDHHTAVHHNQPNCESYQNYKGVFKDN-AHGVFNGKVFVDK 323
>gi|228471669|ref|ZP_04056442.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
gi|228276822|gb|EEK15517.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
Length = 433
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 146/327 (44%), Gaps = 35/327 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFVEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG-VSDGIMKRVSDFISEF-----QCGD 179
A LV ++G+ + VG+ + + + + K FI ++ + GD
Sbjct: 81 ADCYQLVFVNGYY------CPEMSSKEIVGATISPLLEALHKGGEAFIKKYFNTNTEKGD 134
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F ++N A + I VP G V+ PI L Y + D K++ PR ++ V E
Sbjct: 135 IFTALNTAFASEGIYIEVPKGKIVDKPIQLLYFN------DRKEITCYQPRNIIAVGENA 188
Query: 240 EVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
++ +IE V + +D A N V E + K + + LQN SL A+ I T + QE
Sbjct: 189 QLKVIE--VHQNLSDTATAILTNVVTEAFVAKEAFLDYYKLQNDSLTASLIDNTYISQEA 246
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRG 354
S + S GG L+R+N++ G E+ L +L Q D ++ L++H P
Sbjct: 247 NSHASVHTFSFGGTLTRNNLNFYHQGEYLESTLKGLSILKGTQHTDHYT--LVNHACPNC 304
Query: 355 YCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q +K IV+ VF+G + V +
Sbjct: 305 ESHQDYKSIVSDE-ATNVFNGKIMVEQ 330
>gi|92113361|ref|YP_573289.1| FeS assembly protein SufD [Chromohalobacter salexigens DSM 3043]
gi|91796451|gb|ABE58590.1| Iron-regulated ABC transporter permease protein SufD
[Chromohalobacter salexigens DSM 3043]
Length = 445
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 15/320 (4%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF 128
+P + R + + + +P+++DE +++TD I + S
Sbjct: 18 EPTWVTARRQAGAARFEALGFPTKRDEAWKYTDVRRIAEGEFALTYDAELSASRFEALSM 77
Query: 129 P----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FW 182
P LV +DG + ++ LP+G+ + L + + I D F
Sbjct: 78 PLDAYRLVFVDGVFSTALSDVEALPEGISIEPLTTAMRTNHEAIGGAIGRLAGVDFSPFT 137
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEV 241
++N + + V+ + G V+ PIY+ + S + + P +S+PRV+V+ +
Sbjct: 138 ALNVALSEEGAVVRIGQGVVVDKPIYVVFAS------RANEAPRMSHPRVLVMAGARSQS 191
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
+IE + G+ G + N V EV++ +G V H LQ S H+ V Q S +
Sbjct: 192 TVIEHYAGETGA-ANFTNVVSEVMLERGAIVDHYKLQEASSEDLHVASIHVEQARDSRFT 250
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 361
++ GG L R ++ E + + Q D H+ + + P+ + + +K
Sbjct: 251 SFNLNLGGALVRTDLVTDLNAQGAEANYNGLFFVQGRQHVDNHTLVNHNAPQTFSNENYK 310
Query: 362 CIVAHSLGQAVFDGNVKVNR 381
I+ + + VF+G V V R
Sbjct: 311 GIL-NDRARGVFNGKVIVKR 329
>gi|352101432|ref|ZP_08958738.1| Fe-S cluster assembly protein SufD [Halomonas sp. HAL1]
gi|350600598|gb|EHA16662.1| Fe-S cluster assembly protein SufD [Halomonas sp. HAL1]
Length = 446
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 137/335 (40%), Gaps = 15/335 (4%)
Query: 54 ESLEDSLPSSSSSL-PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
++ D+L + SSS +P + R + + + +P+R+DE +++TD I
Sbjct: 5 QTFLDTLKARSSSYTAEPTWIAARRQAGAARFEALGFPTRRDEEWKYTDVRSIAQGNFAL 64
Query: 113 ITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
S + P L +DG ++ ++ +LP V V L + V
Sbjct: 65 ADNAEFSQASAAALTLPIDAYRLTFVDGVFSSALSDVDSLPSSVQVLPLSKALAENHEAV 124
Query: 169 SDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+ D F ++N + V+ + G VE PI L++LS G V +
Sbjct: 125 GGPLGRLTGVDFSPFAALNTAFMEEGAVVRIAPGTVVEKPILLQFLSRAGQPV------M 178
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
+PRV+V E +IE + G E + N V E+++ +G + H LQ L H
Sbjct: 179 CHPRVLVEAGSRSEATLIEHYTG-ESEATNFTNVVGELMLDRGAILAHYKLQEAPLGDMH 237
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
+ V Q + Y +S GG L R+++ G ET Q D H++
Sbjct: 238 VASIHVEQSRDTRYTSYNLSLGGALVRNDLISDLNGQGAETNFLGLFFGQGRQHVDNHTK 297
Query: 347 LLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ + P + + +K I+ VF+G V V R
Sbjct: 298 VNHNAPLTFSNENYKGIL-DDRAHGVFNGKVYVKR 331
>gi|336450976|ref|ZP_08621422.1| FeS assembly protein SufD [Idiomarina sp. A28L]
gi|336282232|gb|EGN75470.1| FeS assembly protein SufD [Idiomarina sp. A28L]
Length = 422
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 132/316 (41%), Gaps = 22/316 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA----QF 128
L +R ++ TL WP+R+ E +R+T + ++ S+++ A
Sbjct: 19 LSPVRQTALATLREQAWPTRRTEAWRYTSLHEVAELELAQANSAQSTVNAEAPAIEGLNS 78
Query: 129 PSLVLIDGFIQNSALNLSN--LPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSIN 185
LV +D + S LP+GV V SL GV+ R+S ++ + LF +N
Sbjct: 79 LDLVFVDA---QPVTDFSKLILPEGVTVTSLHGVNADQQARISKIFNQAKPTHHLFGLVN 135
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
+ A VI V AG ++E PI + +G S+ RV+V V + +V +IE
Sbjct: 136 DVLAEQGVVIDVAAGAEIEQPIRIVNFVTDGVE--------SHHRVLVNVGDNAKVTVIE 187
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
GN + E V+G K+ H A H+ + + S V
Sbjct: 188 H---GAGNGHSMNTAYAEYVLGSETKLEHYRFAMHGQEAIHMGGSHFKLGEHSRLNSTIV 244
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 365
G +L+R + V +++ +LL + DLH+ + P G + + IV
Sbjct: 245 GYGSRLTRIDTDVIHAAEHAFAKMNCIYLLAPKEHFDLHTTIEHAKPNGTSEENARGIVG 304
Query: 366 HSLGQAVFDGNVKVNR 381
+A+F+G + ++R
Sbjct: 305 DK-AKAIFNGRIHIHR 319
>gi|294507395|ref|YP_003571453.1| FeS assembly protein SufD [Salinibacter ruber M8]
gi|294343723|emb|CBH24501.1| FeS assembly protein SufD [Salinibacter ruber M8]
Length = 487
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 171/384 (44%), Gaps = 39/384 (10%)
Query: 16 RNPK-LTPKRRAKPNKIRVSLQTTF-----PQATFSDPFVIQLAESLEDSLPSSSSSLPQ 69
R P+ L P R P R ++ T P+ F F + ++L +++S+ Q
Sbjct: 23 RGPRPLAPPRFCSPTD-RSTMTTALDTDVRPEDRFISAFEVNHGQALN----GTNASIAQ 77
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-MIKSSQIQPITRPSSSLDVSTDAQF 128
R+ + + P+ E +++T+ S I ++ SLD S A F
Sbjct: 78 Q------REDAIERFAQLGIPTNDLEAWKYTNISKTIDRPYTLSLSPEGPSLDPSDIAPF 131
Query: 129 P-------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISEFQCG 178
+VL++G + S ++ +LP GV + SL + I++ ++F+
Sbjct: 132 TIDEMDAHRVVLVNGHVDESLSDIGDLPSGVVLSSLAQAGEEHPDIVEEHYGQYADFE-D 190
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
+ ++N D IYVP+G VE PI+ +L + G S+ L + PR + +VE+G
Sbjct: 191 EALTALNTAFVQDGAFIYVPSGTIVEKPIF--FLHITAG---SEPLFL-QPRHLFVVEDG 244
Query: 239 GEVGIIE-EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
++E + E + N+V E +G+ + H +Q++ NA+ + A +QE
Sbjct: 245 AIAKVVEAQHSVTEAQT--FTNTVSEAFVGERANLEHYLVQDEGANASQVHTRAGQQEDD 302
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y ++ G++ R+N ++ G E+ L + + D H+++ P
Sbjct: 303 SVYSTNTITFSGEVVRNNATIEVNGSFCESNLYGLCIGKDEMHVDNHTQMNHVQPDCSSN 362
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
+L+K ++ + AVF+G V V R
Sbjct: 363 ELYKHVL-NDESTAVFNGKVLVTR 385
>gi|388257768|ref|ZP_10134947.1| FeS assembly protein SufD [Cellvibrio sp. BR]
gi|387938935|gb|EIK45487.1| FeS assembly protein SufD [Cellvibrio sp. BR]
Length = 442
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 141/322 (43%), Gaps = 20/322 (6%)
Query: 69 QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVST 124
QPL LQ R +++ L+ WP+RK E +++T ++ + + S + LD
Sbjct: 16 QPLQWLQSFRAAAANDWLAQAWPTRKTEHWKYTPLQSLQKTLLTAFGNRSGFSAELDAEL 75
Query: 125 DAQFP-----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD 179
Q LV I+G L+++ V ++++ I E +
Sbjct: 76 RRQLIPLDALRLVFINGVFDADNSILADV--AVRFSQANSEQQALIEKHLGKIVEGE-RH 132
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
LF ++N + +++VP ++E P+Y+ N+ S SN R++++++E
Sbjct: 133 LFATLNNAWLEEGVLLHVPCNQRLEKPVYIV-------NITSGAACASNQRLLIVLDENA 185
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ ++E + + NS+ E+ + G ++H L ++ A H+ V + +
Sbjct: 186 QAEVVEHYFTCGAAQTGFVNSLTEIYLADGANLQHYRLNMEAEQAQHVGAVHVDLQRNAR 245
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQL 359
++ G + R + + GP E +L +L + Q D H+ + P ++
Sbjct: 246 LRGFALALGASVMRIDYQLNHRGPGAELDLQGVYLPRNQQVVDYHTNICHWVPHCTSNEV 305
Query: 360 HKCIVAHSLGQAVFDGNVKVNR 381
+ I++ S QA+F+G + +++
Sbjct: 306 FRGIISDS-AQAIFNGRIYIHQ 326
>gi|294626269|ref|ZP_06704872.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292599415|gb|EFF43549.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 420
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ +I V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 135 EGVLIRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + NSV+ V + +G + H+ +Q S +A + T + Y+ V++ G
Sbjct: 189 VGDAAHLENSVMHVHLAQGAALSHARMQAGSAHATSLLRTDAVLARDARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH ++V+ G +L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHELNVRLEG--NNAQLAANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKV 379
+ VF G +++
Sbjct: 307 RVVFHGGIRI 316
>gi|334143296|ref|YP_004536452.1| FeS assembly protein SufD [Thioalkalimicrobium cyclicum ALM1]
gi|333964207|gb|AEG30973.1| FeS assembly protein SufD [Thioalkalimicrobium cyclicum ALM1]
Length = 446
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 33/347 (9%)
Query: 52 LAESLEDSLPSSSSSLPQP----LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
+A++ D S ++ L Q L + R ++ + +P+RKDE ++FT S
Sbjct: 14 VAKAAMDYYQSQATRLIQAEGEGHALARFRQAALHHFVEQGFPTRKDEDWQFTPLSNFLK 73
Query: 108 SQIQPITRPSSSLDVSTDAQFP------SLVLIDG-FIQNSALNLSNLPDGVYVGS---L 157
+ S D ++ A+ LV +DG F + + +L LP GV + S
Sbjct: 74 THYH--FNGVSQFDKASIAKIKPPVDAWHLVFVDGCFSEALSDDLVKLPKGVSIESGKDA 131
Query: 158 LGVSDG--IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVE 215
L G + + D I + D F +N M D I + A ++ PI + Y
Sbjct: 132 LDFEQGFRVFAKHEDEIEQ----DAFGMLNAMLFDDGVFIELAAHTHLDKPIAISY---- 183
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
V + K + R + + G ++ +IE++V + + C + NSV E+ + + ++
Sbjct: 184 ---VQTLKDHANTTRNKIKLGVGSQLQLIEQYVALD-DACGFENSVCEIELAEQAQMSQV 239
Query: 276 YLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 335
QN A + + S ++ GG +SRH H+Q G E+E +S
Sbjct: 240 VWQNLPDQAMYFNNQFIDLAEQSQFKTHYAGLGGAISRHQNHIQMAGDRIESEQNSICFA 299
Query: 336 VSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 381
+ Q D + G RQLHK ++ ++G VF+G +KV++
Sbjct: 300 RNQQIMDTRTYTGHKAENGLSRQLHKLVLTDQAIG--VFNGMIKVDQ 344
>gi|238791666|ref|ZP_04635303.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
gi|238728770|gb|EEQ20287.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
Length = 428
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 135/311 (43%), Gaps = 34/311 (10%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI------QPITRPSSSLDVSTDAQFPSLVLID 135
Q +L +PS K E +++T + + + Q L + DA LV ID
Sbjct: 39 QQVLQLGFPSFKHEDWKYTPLERLLAHRFSFASPAQVTASQRDELSLVQDAH--RLVFID 96
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G A LS++ G Y L +S + F Q ++F + A + I
Sbjct: 97 G---RYAPELSDIECGPY--QLTNLSGN-----TQFPPAIQ-SEVFLHLTESLAQESLHI 145
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+P G E P+YL L + GN DS + S+ R +++E + +IE FV
Sbjct: 146 RLPVGKHSEKPLYL--LHISSGN-DSDVVNTSHYRHHLVIEANAQAEVIEHFVSL-NQQP 201
Query: 256 YWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + L + +G ++ H L QS + AH R A Y + G L+
Sbjct: 202 HFTGARLTIAVGDNAELHHCKLAFEAPQSYHFAHNDLLLSRDSRARSYSFL---LGAGLT 258
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 259 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRSYLEHNKGYCESRQLHKTIVRER-GK 315
Query: 371 AVFDGNVKVNR 381
A+F+G +KV +
Sbjct: 316 AIFNGMIKVAK 326
>gi|426401808|ref|YP_007020780.1| feS assembly protein SufD [Candidatus Endolissoclinum patella L2]
gi|425858476|gb|AFX99512.1| feS assembly protein SufD [Candidatus Endolissoclinum patella L2]
Length = 431
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 30/297 (10%)
Query: 95 EPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN-LSNLPDGVY 153
E +RFT+ + K+ ++PI S+++ +S F L ++ I N L + +P+ +
Sbjct: 45 EAWRFTNLNAFKA--LEPIAANSTAI-LSCPKVFAELNALELHISNGILTWIDAVPEYI- 100
Query: 154 VGSLLGVSDGIMKRVS-DFISEFQCGDL------FWSINGMGAPDLGVIYVPAGCKVENP 206
L +D +R++ ++ E + F +IN + + G ++ P
Sbjct: 101 --DLFDFAD---RRITPTWVIEAFGSTINTKMHPFTAINTTAFSGGVAMRIRKGAVMKKP 155
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
I L + G K+ NPRV+V++EE +IE G + Y N V E+VI
Sbjct: 156 IILLVDTQANG-----KIVAVNPRVLVVLEEDAVADLIEIHTG---SGVYINNVVTELVI 207
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTE 326
GK + H LQ + +A HI A R S Y+ +STG KLSR+ + G
Sbjct: 208 GKNSHISHYKLQAEDTDAFHIAMNAARCAANSIYDNFALSTGAKLSRNEISATLAGSHIN 267
Query: 327 TELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
++ +L SD Q + + +DH C +L+K ++A+ Q VF G + V +
Sbjct: 268 YSINGSYLACSD--QHMETVTFIDHVEPACVSHELYKGVLANH-AQGVFQGKILVRK 321
>gi|338530235|ref|YP_004663569.1| FeS assembly protein SufD [Myxococcus fulvus HW-1]
gi|337256331|gb|AEI62491.1| FeS assembly protein SufD [Myxococcus fulvus HW-1]
Length = 446
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 138/323 (42%), Gaps = 21/323 (6%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVS 123
P L++LR + P+ +DE ++++ I P R + SS+
Sbjct: 25 PRWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAIADGTFIPAARDARDAAHLSSVVER 84
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LF 181
P LV +DG + +++ LP G+ + L + + + + + F
Sbjct: 85 LGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGELLESLLGQRALSNEHAF 144
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N + ++ + G E P+ L +L+ G V +++PR++V+ E E
Sbjct: 145 TALNAALLEEGALLRLAPGALSEVPVQLLFLTRGDGPV------LASPRILVVAGESSEA 198
Query: 242 GIIEEFV--GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
++E + G G+ + N+V EV +G + H LQ ++ A H+ RQ S
Sbjct: 199 TLVETYASAGPAGSSATFTNAVTEVTLGDNASLHHYKLQVEADAALHLGALHARQGRDSR 258
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCR 357
+ + GG ++R+ VH G + L+ L V Q L +R LDH PR R
Sbjct: 259 FASHAFAFGGAMARNEVHAAFAGEGGDATLNG--LYVGQGAQHLDNRTALDHAVPRCTSR 316
Query: 358 QLHKCIVAHSLGQAVFDGNVKVN 380
+L+K ++ + F G ++V
Sbjct: 317 ELYKGVL-DGQSRGTFHGLIRVR 338
>gi|374263111|ref|ZP_09621663.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
gi|363536373|gb|EHL29815.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
Length = 397
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 14/229 (6%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLI-DGFIQNSALNLSN 147
+P R DE +++T + +++ ++D S ++I +G I +
Sbjct: 14 FPGRHDEEWKYTRVDALLKQPFAAYHHGLAAVPKASDLPIASQIVIHNGLISGVEVLAKT 73
Query: 148 LPDGVYV---GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE 204
LP GV V + L ++K I + + G F + + L IY+PAG ++
Sbjct: 74 LPAGVLVLPLAAALISHPELLKPYLGMILKQEHGFHFLNTAMIHCGVL--IYLPAGVYLD 131
Query: 205 NPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEV 264
PI L+++ + + R V++ E G + I+E++ G E N CY N+V EV
Sbjct: 132 EPIALRHIQDQTNQA-------VHLRHVIIAEAGSQATIVEDYQGLE-NSCYLTNTVTEV 183
Query: 265 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
+G K+ H +Q +S A H+ +V+Q T S + +S GGK R
Sbjct: 184 FMGTNAKLTHCKIQRESKAAYHLGHLSVKQSTRSEFANHSLSLGGKCVR 232
>gi|378767457|ref|YP_005195925.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis LMG 5342]
gi|365186938|emb|CCF09888.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis LMG 5342]
Length = 425
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 51/318 (16%)
Query: 82 QTLLSTPWPSRKDEPFRFT-------------DTSMIKSSQIQPITRPSSSLDVSTDAQF 128
Q L+ P+RK E +++T + + ++Q+ ++ P ++
Sbjct: 35 QQLMRLGLPTRKHENWKYTPLDGLLAHHFVLPEAHELSATQVDALSLPLDAV-------- 86
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
LV +DG Q AL+ S+ L + + D + Q ++F +
Sbjct: 87 -RLVFVDGRFQ-PALSSSD-------TELFEIQHSVAAERRDLPAAVQP-EIFLHLTESL 136
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A ++ I + G P+YL L + G D + + R + +EE E +IE FV
Sbjct: 137 AEEVTHIRLARGKAAARPLYL--LHITSGKDDG--MNTVHHRHHLQLEESAEAEVIEHFV 192
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELV 303
+ ++ + + ++RH+ L +S + H + Q T++ + L
Sbjct: 193 TL-NDSAHFTGARFTFAVADNARLRHTKLAFESSKSYHFAHNDIVINRDAQVTSTSFLL- 250
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
G LSRHN Q G +T+ L+S L V+ + D +R L+H +G+C RQ+HK
Sbjct: 251 ----GAGLSRHNTSTQLNGENTQLSLNSLVLPVNQEVAD--TRTYLEHNKGHCLSRQMHK 304
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV G+AVF+G++KV
Sbjct: 305 TIVRDK-GRAVFNGHIKV 321
>gi|347756366|ref|YP_004863929.1| FeS assembly protein SufD, group 1 [Candidatus Chloracidobacterium
thermophilum B]
gi|347588883|gb|AEP13412.1| FeS assembly protein SufD, group 1 [Candidatus Chloracidobacterium
thermophilum B]
Length = 440
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 33/324 (10%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS-------SSLDVST 124
P ++++ + T P+ +DE +R+T+ + + +P T S +
Sbjct: 27 PYGRVQEDAFATFERLGLPTVRDEAWRYTNLAPLTKRSFRPATADGLMAANLQSGIAFFD 86
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
++ +V ++G Q + +LS LP GV + L DG S F+ +L +
Sbjct: 87 ESATTRMVFVNGAFQAALSDLSGLPAGVEIRRL----DGPAPLPEADASSFRALNLAFLS 142
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
+G+ I V G V PI L +++ D ++ ++PRV++ ++E ++
Sbjct: 143 DGV------TIRVARGRAVAAPIGLFFVTAP---TDDDRM--THPRVIIELDEAAIATVV 191
Query: 245 E------EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
E + G+ G Y N+V +V +G+G + H +Q + A HI V +
Sbjct: 192 EIHTVLCDEEGRFGTHPYLTNAVTDVRLGQGANLTHIKVQTEGSAAYHIADLRVDIGRGA 251
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYC 356
+ + GG+LSR ++ + L E L L Q D H + +DH P
Sbjct: 252 AFTGHAHALGGQLSRQDIRARFLDEGGECRLYGLQALRGQQLADTH--VTVDHAVPNSTS 309
Query: 357 RQLHKCIVAHSLGQAVFDGNVKVN 380
L+K I VFDG V V
Sbjct: 310 EVLYKGIFDEQ-AHGVFDGRVIVR 332
>gi|347757852|ref|YP_004865414.1| feS assembly protein SufD [Micavibrio aeruginosavorus ARL-13]
gi|347590370|gb|AEP09412.1| feS assembly protein SufD [Micavibrio aeruginosavorus ARL-13]
Length = 414
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 50/326 (15%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV 122
S + L +P L RD + + + P+ K E +++T+ I P+ + +
Sbjct: 33 SDTLLHEPDWLAACRDKAREIVARRGLPTAKLEGWKYTN--------ILPVVKAIN---- 80
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLP-DGVYVGSLLGV--SDGIMKRVSDFIS--EFQC 177
Q +N+++ G+ V SL G+ D + K +S +S E+
Sbjct: 81 ----------------QAGTVNITHKEGHGITVNSLAGMLGEDWVQKAISAPLSDKEYNA 124
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
+ W + + D VI VPA + + P+ L ++ +GG ++N R+++ +
Sbjct: 125 ENTLWYLGNLFLRDGLVIDVPANTEAKTPLDLTMVA-DGG--------LANARLIIRLGA 175
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
+ +IE G YW N ++++ G + H Q S A H + T
Sbjct: 176 NARLTVIEHHTG---TGAYWKNIQTQIILADGAHLTHVRYQEDSEQAVHTQLTHSVLGKD 232
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGY 355
SGYE + STG +L R+ +H G LS+ +LL Q D + +L+DH P G
Sbjct: 233 SGYEGIVFSTGSRLFRNQLHGVMNGAGAVCSLSAVNLLTGQQHGD--TTILVDHMAPNGN 290
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q + ++ VF G V V++
Sbjct: 291 SNQNIRTVL-DGTAHGVFQGKVHVHQ 315
>gi|330994037|ref|ZP_08317967.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
gi|329758983|gb|EGG75497.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
Length = 424
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 25/259 (9%)
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
A P +V ++G + S LP GV V + ++G R+ D I GD+ ++N
Sbjct: 86 AAAPRVVFVNGHFDAAR---SRLPTGVRVSTF--AAEG---RIGDDIDP--AGDVTTALN 135
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGII 244
+ A D V+ VP G + L + V G V PIS +PR ++VE+GG + ++
Sbjct: 136 TVLAHDGLVLVVPEGVDA-GCLLLASIGVAAGGV-----PISFHPRHSIVVEKGGRLALL 189
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
+ G Y N + ++ + GG + H+ +Q + A H+ + R A Y+
Sbjct: 190 D---AAAGQGFYLHNPLYDITVAGGGHLSHARVQVEGQEAVHLAVSHARIAAAGLYDSFT 246
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 364
++ G LSRH VH ++ LL Q DL S + P RQ K ++
Sbjct: 247 LTLGASLSRHEVHAVLTATRACVHVNGAQLLTGRQHGDLTSVITHAAPDCISRQTVKNVL 306
Query: 365 AHSLGQA--VFDGNVKVNR 381
+ GQA VF G + V+R
Sbjct: 307 S---GQAHGVFQGKIHVDR 322
>gi|78048637|ref|YP_364812.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325925549|ref|ZP_08186937.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
perforans 91-118]
gi|418516646|ref|ZP_13082818.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|78037067|emb|CAJ24812.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325544053|gb|EGD15448.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
perforans 91-118]
gi|410706662|gb|EKQ65120.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 420
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDEAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + ++E +
Sbjct: 135 EGVLVRVQAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVVEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + ANSV+ V + +G + H+ +Q S +A + T + Y+ V++ G
Sbjct: 189 VGDAAHLANSVMHVHLAQGAALSHARVQAGSAHATSLLRTEAVLARDARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH ++V+ G +L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHELNVRLEG--NNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKV 379
+ VF G +++
Sbjct: 307 RVVFHGGIRI 316
>gi|21243664|ref|NP_643246.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
gi|21109242|gb|AAM37782.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
Length = 420
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 135 EGVLVRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + NSV+ V + +G + H+ +Q S +A + T + Y+ V++ G
Sbjct: 189 VGDAAHLENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH ++V+ G +L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHELNVRLEG--NNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKV 379
+ VF G +++
Sbjct: 307 RVVFHGGIRI 316
>gi|147866701|emb|CAN79416.1| hypothetical protein VITISV_000220 [Vitis vinifera]
Length = 164
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 32/88 (36%)
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
Q ++ YEL+EVSTGGKLSRHNV++QQ+GPDT TELS+FHL
Sbjct: 4 QGSSGPYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHL------------------- 44
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
S+GQAVFDG +KVNR
Sbjct: 45 -------------SVGQAVFDGXIKVNR 59
>gi|378579478|ref|ZP_09828145.1| component of SufBCD complex [Pantoea stewartii subsp. stewartii
DC283]
gi|377817952|gb|EHU01041.1| component of SufBCD complex [Pantoea stewartii subsp. stewartii
DC283]
Length = 425
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 51/318 (16%)
Query: 82 QTLLSTPWPSRKDEPFRFT-------------DTSMIKSSQIQPITRPSSSLDVSTDAQF 128
Q L+ P+RK E +++T ++ + +SQ++ + P ++
Sbjct: 35 QQLMRLGLPTRKHENWKYTPLDGLLAQHFVLPESQDVSASQVEALALPLDAI-------- 86
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
LV +DG Q SAL+ + + + D + Q ++F +
Sbjct: 87 -RLVFVDGKFQ-SALSATGT-------DFFEIQHSVAAERRDLPAPVQP-EVFLHLTESL 136
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A ++ I +P G P+YL L + G D + + R + +EE E +IE +V
Sbjct: 137 AEEVTHIRLPRGKAASRPLYL--LHITSGKDDG--MNTVHYRHHLQLEESAEAEVIEHYV 192
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELV 303
+ ++ + ++H+ L +S + H + Q T++ + L
Sbjct: 193 TL-NDSAHFTGGRFTFAVADNATLKHTKLAFESTKSYHFAHNDIVINRDAQVTSTSFLL- 250
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
G LSRHN Q G +T+ L+S L V+ + D +R L+H +G+C RQ+HK
Sbjct: 251 ----GAGLSRHNTSTQLNGENTQLSLNSLVLPVNQEVAD--TRTYLEHNKGHCLSRQMHK 304
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV G+AVF+G++KV
Sbjct: 305 TIVRDK-GRAVFNGHIKV 321
>gi|329296200|ref|ZP_08253536.1| SufD [Plautia stali symbiont]
Length = 425
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 134/307 (43%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q L+ P+RK E +++T + + Q P S + P LV +DG
Sbjct: 35 QQLMRVGPPTRKHENWKYTALDNLLTQQFVQAEAPGVSAEQVAALALPLDAICLVFVDGR 94
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
Q LS+ G++ V + Q ++F + A ++ I +
Sbjct: 95 FQP---ELSSRDTGLF-----DVQHSRAAGRRPLPAAVQP-EVFLHLTESLAEEVTSIRL 145
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P G P+YL L + G D+ L + R + +E G E +IE +V G ++
Sbjct: 146 PRGKAAAQPLYL--LHITSGQADA--LNTVHHRHHLELESGAEAQVIEHYVTLNGR-AHF 200
Query: 258 ANSVLEVVIGKGGKVRHSYL---QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
+ +G +++H+ L ++ S + AH R S + G LSRH
Sbjct: 201 TGARFTFAVGDNAQLKHTKLAFEESSSYHFAHNDIVIGRDAQVSSTSFL---LGAGLSRH 257
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
N +Q G +T+ L+S L V + D +R L+H +G+C RQLHK I + G++V
Sbjct: 258 NTSLQLNGENTQLSLNSLVLPVGSEVAD--TRSYLEHNKGHCLSRQLHKTI-SRDKGRSV 314
Query: 373 FDGNVKV 379
F+G++KV
Sbjct: 315 FNGHIKV 321
>gi|393769168|ref|ZP_10357696.1| FeS assembly protein SufD [Methylobacterium sp. GXF4]
gi|392725409|gb|EIZ82746.1| FeS assembly protein SufD [Methylobacterium sp. GXF4]
Length = 440
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 25/318 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVSTDAQFPSL-- 131
R+ + + + PSR+ E F++TD + P PS + V++ F L
Sbjct: 34 REEAFRFFEAAGLPSRRVEAFKYTDLRAAMKEAVPPAEAPSPEVAQAAVASAKGFAGLDA 93
Query: 132 ---VLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGDLFWSIN 185
++G + +L LP G+ V L +G D ++ ++ E + + +N
Sbjct: 94 ARLTFVNGHLIRPLSDLDGLPAGLTVTPLNDAMGKGDARLRLLAPV--EQARENPVFQLN 151
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D +I V G K+E ++L+++ S+ + RV+V + G E+ ++E
Sbjct: 152 TAFLADGALISVAPGTKIERALHLRFV-----GTGSEGFSTAT-RVLVDLGAGAELTLLE 205
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
G + + Y N L+V +GK RH+ L + A + +VR + + E V +
Sbjct: 206 SHEGPD-DITYQPNDALDVRVGKQAVFRHARLNREGKAAIALSTISVRLDDEARLETVNL 264
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR--GYCRQLHKCI 363
TG LSRH + + G + ++ +L Q D S LL DH G R++ K +
Sbjct: 265 VTGAVLSRHQIFMHVAGENVNAVVNGAAMLGDGQLAD--STLLADHAAVGGVGREMFKTV 322
Query: 364 VAHSLGQAVFDGNVKVNR 381
+ VF G + V +
Sbjct: 323 IDGD-ATGVFQGKIIVRQ 339
>gi|390989906|ref|ZP_10260199.1| feS assembly protein SufD [Xanthomonas axonopodis pv. punicae str.
LMG 859]
gi|372555350|emb|CCF67174.1| feS assembly protein SufD [Xanthomonas axonopodis pv. punicae str.
LMG 859]
Length = 420
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 135 EGVLVRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + NSV+ V + +G + H+ +Q S +A + T + Y+ V++ G
Sbjct: 189 VGDAAHLENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH ++V+ G +L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHELNVRLEG--NNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKV 379
+ +F G +++
Sbjct: 307 RVIFHGGIRI 316
>gi|429753386|ref|ZP_19286193.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 326 str.
F0382]
gi|429173667|gb|EKY15179.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 326 str.
F0382]
Length = 433
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 142/325 (43%), Gaps = 31/325 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG-VSDGIMKRVSDFISEF-----QCGD 179
A LV ++G+ + VG+ + + + + K FI ++ + GD
Sbjct: 81 ADCYQLVFVNGYY------CPEISSKEIVGATITPLLEALHKGGEAFIKKYFNTNTEKGD 134
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F ++N + I VP G V+ PI L Y + D K+ PR ++ V E
Sbjct: 135 IFTALNTAFTSEGLYIEVPKGKIVDKPIQLLYFN------DRKETTCYQPRNIIAVGENA 188
Query: 240 EVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
++ +IE V + +D A N+V E + K + + LQN SL A+ I T + QE
Sbjct: 189 QLKVIE--VHQNLSDTATAILTNAVTEAFVAKEAFLDYYKLQNDSLTASLIDNTYISQEA 246
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
S + S GG L+R+N++ G E+ L +L Q D ++ + +P
Sbjct: 247 NSHASVHTFSFGGTLTRNNLNFYHQGEYLESTLKGLSILKGTQHTDHYTLVNHAYPNCES 306
Query: 357 RQLHKCIVAHSLGQAVFDGNVKVNR 381
Q +K IV+ VF+G + V +
Sbjct: 307 HQDYKSIVSDE-ATNVFNGKIMVEQ 330
>gi|340617828|ref|YP_004736281.1| protein SufD [Zobellia galactanivorans]
gi|339732625|emb|CAZ95893.1| Protein SufD [Zobellia galactanivorans]
Length = 438
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 150/340 (44%), Gaps = 23/340 (6%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ +R + + +PS+K+E +++T + ++
Sbjct: 3 LKDKLISSFMAFENNVDIEHPVHDVRTEAMKNFERKGFPSKKEEAWKYTSLNSLQKIDFS 62
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
R ++L+ ++ +V +DG I +S L+ DGV + +
Sbjct: 63 IFPREENTLEYKNVKKYFLHEVDSYKIVFVDG-IYSSYLS-ETTHDGVDICLMSAALTKP 120
Query: 165 MKR--VSDFISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
M R + + ++ D S+N + + IY+P + PI + + + GN S
Sbjct: 121 MYRPVIDVYFNKVASKDESLTSLNTAFSREGAYIYIPKNKMPKKPIEIIHFAT--GNEAS 178
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
L PR +V+ EE EV IIE N+ NSV E+ K V + +QN +
Sbjct: 179 LLL---QPRNLVIAEENAEVQIIERHQSLTSNEV-LTNSVTEIFAAKNAIVDYYKIQNDA 234
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
+A+ I T + Q+ S ++ S GGKL+R+N++ Q G ++ + +L Q
Sbjct: 235 PSASLIDNTYIDQKDKSVVKIHTFSFGGKLTRNNLNFYQNGEYIDSTMKGVTILGDKQHV 294
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + P Q +K I S VF+G + V++
Sbjct: 295 DHHTLVHHIEPNCESHQDYKGIYGDS-STGVFNGKIIVDK 333
>gi|346725751|ref|YP_004852420.1| iron-regulated ABC-type transporter [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650498|gb|AEO43122.1| iron-regulated ABC-type transporter [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 420
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 142/310 (45%), Gaps = 18/310 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDEAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + ++ L G + ++E +
Sbjct: 135 EGVLVRVQAGAQIELPLHLVFVGVAG----EQDLSWHHRHLIAL-RAGAALQVVEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + ANSV+ V + +G + H+ +Q S A + T + Y+ V++ G
Sbjct: 189 VGDAAHLANSVMHVHLAQGAALSHARVQAGSAQATSLLRTDAVLARDARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH ++V+ G L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHELNVRLEG--NNAHLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKV 379
+ VF G +++
Sbjct: 307 RVVFHGGIRI 316
>gi|238787123|ref|ZP_04630923.1| hypothetical protein yfred0001_6090 [Yersinia frederiksenii ATCC
33641]
gi|238724911|gb|EEQ16551.1| hypothetical protein yfred0001_6090 [Yersinia frederiksenii ATCC
33641]
Length = 428
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 137/309 (44%), Gaps = 34/309 (11%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVSTDAQFPSLVLID 135
Q +L +PS K E +++T + + P+ +L + DA LV +D
Sbjct: 39 QQVLQLGFPSAKHEDWKYTPLERLLAHNFDFACAPAVTPAQRDALSLVQDAH--RLVFVD 96
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G + LS+ G Y L +++ + F + Q ++F + A + I
Sbjct: 97 G---RYSPELSDSECGPY--QLTSMTEN-----TQFPAAIQ-PEVFLHLTESLAQEGLHI 145
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+PAG + + P+YL L + GN DS + S+ R + +E + +IE FV
Sbjct: 146 RLPAGKQSDKPLYL--LHISSGN-DSDVVNTSHYRHHLTIEVAAQAEVIEHFVSL-NEQP 201
Query: 256 YWANSVLEVVIGKGGKVRHSYLQ---NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + L + +G ++ H L QS + AH R A Y + G L+
Sbjct: 202 HFTGARLTIAVGDNAELSHCKLAFETTQSYHFAHNDLVLERDARARSYSFL---LGAGLT 258
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 259 RHNTSAQLNGEGATLAINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTIVRER-GK 315
Query: 371 AVFDGNVKV 379
A+F+G +KV
Sbjct: 316 AIFNGMIKV 324
>gi|393779806|ref|ZP_10368041.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|392609763|gb|EIW92566.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 412 str.
F0487]
Length = 433
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 23/321 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYVI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A LV ++G+ + S+ ++ + +L + +K+ F + + GD+F +
Sbjct: 81 ADCYVLVFVNGYYSPEMSSKEIAGATITPLLEALHKGGEAFIKKY--FNANTEKGDVFTA 138
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N A + I VP V+ PI L Y + D K+ PR ++ V E ++ +
Sbjct: 139 LNTAFASEGIYIEVPKAKVVDKPIQLLYFN------DRKETTCYQPRNIIAVGENAQLKV 192
Query: 244 IEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
IE V + +D A N V E + K + + LQN SL A+ I T + QE S
Sbjct: 193 IE--VHQNLSDTATAILTNVVTEAFVAKDAFLDYYKLQNDSLTASLIDNTYISQEANSHA 250
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ S GG L+R+N++ G E+ L +L Q D ++ + +P Q +
Sbjct: 251 SVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILQGTQHTDHYTLVNHAYPNCESHQDY 310
Query: 361 KCIVAHSLGQAVFDGNVKVNR 381
K IV+ VF+G + V +
Sbjct: 311 KSIVSDE-ATNVFNGKIMVEQ 330
>gi|256820069|ref|YP_003141348.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
gi|256581652|gb|ACU92787.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
Length = 433
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYVI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A LV ++G+ + S+ ++ + +L + +K+ F + + GD+F +
Sbjct: 81 ADCYVLVFVNGYYSPEMSSKEIAGATITPLLEALHKGGEAFIKKY--FNANTEKGDVFTA 138
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N A + I VP V+ PI L Y + D K+ PR ++ V E ++ +
Sbjct: 139 LNTAFASEGIYIEVPKAKVVDKPIQLLYFN------DRKEPTCYQPRNIIAVGENAQLKV 192
Query: 244 IEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
IE V + +D A N+V EV + K + + LQN L A+ I T + QE S
Sbjct: 193 IE--VHQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDRLTASLIDNTYISQEANSHA 250
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ S GG L+R+N++ G E+ L +L Q D ++ + +P Q +
Sbjct: 251 SVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILKGTQHTDHYTLVNHAYPNCESHQDY 310
Query: 361 KCIVAHSLGQAVFDGNVKVNR 381
K IV+ VF+G + V +
Sbjct: 311 KSIVSDE-ATNVFNGKIMVEQ 330
>gi|255039511|ref|YP_003090132.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
gi|254952267|gb|ACT96967.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
Length = 439
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 137/301 (45%), Gaps = 20/301 (6%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSAL 143
+PS K E +++++ + S S L D + P+ L ++G S
Sbjct: 47 FPSIKHEEWKYSNVRDLISVSYDFNAESSIGLAELEDLKVPAQEANILYFVNGRYDASLS 106
Query: 144 NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYVPAGC 201
+ + + + + SL +V+ F +E D F ++N D I++P
Sbjct: 107 TIISPVEKITISSLAEAYKNDPAKVASFFNELTKDAEDAFTALNTAFTQDGVFIHIPDNQ 166
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
VE+PI L+++S D+++ + S PR ++ V + V + E F G+ + N+
Sbjct: 167 SVEHPIILRFVS------DAREQHVGSQPRNIIWVGKNAHVKMAEAF-RTLGDQRSFTNA 219
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
V E+ + + V++ +QN+S NA HI T VR S + V+ GK +R+N+++
Sbjct: 220 VTEIHVAEEANVQYYKVQNESENAYHIGTTQVRMLDRSHFYAGTVTLNGKFTRNNLNIVL 279
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVK 378
G + + + L D +Q + + + DH P +L+K I+ + VF+G +
Sbjct: 280 DGEHCDAHM--YGLYFPDGSQHVDNHTVADHQKPNSESNELYKGIL-RDKSKGVFNGKIF 336
Query: 379 V 379
V
Sbjct: 337 V 337
>gi|83814449|ref|YP_445509.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
gi|83755843|gb|ABC43956.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
Length = 446
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 150/328 (45%), Gaps = 36/328 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS--------SLDVST 124
+ + R+ + + P+ E +++T+ S + I RP + SLD S
Sbjct: 34 IAQQREDAIERFAQLGIPTNDLEAWKYTNIS-------KTIDRPYTLSLSPEGPSLDPSD 86
Query: 125 DAQFP-------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISE 174
A F +VL++G + S ++ +LP GV + SL + I++ ++
Sbjct: 87 IAPFTIDEMDAHRVVLVNGHVDESLSDIGDLPSGVVLSSLAQAGEEHPDIVEEHYGQYAD 146
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
F+ + ++N D IYVP+G VE PI+ +L V G S+ L + PR + +
Sbjct: 147 FE-DEALTALNTAFVQDGAFIYVPSGTIVEKPIF--FLHVTAG---SEPLFLQ-PRHLFV 199
Query: 235 VEEGGEVGIIE-EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
VE+G ++E + E + N+V E +G+ + H +Q++ NA+ + A +
Sbjct: 200 VEDGAIAKVVEAQHSVTEAQT--FTNTVSEAFVGERANLEHYLVQDEGANASQVHTRAGQ 257
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
QE S Y ++ G++ R+N ++ G E+ L + + D H+++ P
Sbjct: 258 QEDDSVYSTNTITFSGEVVRNNATIEVNGSFCESNLYGLCIGKDEMHVDNHTQMNHVQPD 317
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+L+K ++ + AVF+G V V R
Sbjct: 318 CSSNELYKHVL-NDESTAVFNGKVLVTR 344
>gi|389875965|ref|YP_006369530.1| FeS assembly protein SufD [Tistrella mobilis KA081020-065]
gi|388526749|gb|AFK51946.1| FeS assembly protein SufD [Tistrella mobilis KA081020-065]
Length = 449
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 15/254 (5%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMG 188
+ +++G + + L DGV V L RV + + GD F ++N
Sbjct: 92 IAMVNGVFSDELSAVGELADGVVVAGLSRALTTAPDRVHAVLGQVARGDRDGFAALNQAA 151
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIEEF 247
D + VP ++ P++L + ++ + ++P+ + PR+V+ + E +IE +
Sbjct: 152 LADGAAVLVPRAVELARPVHLLHHAL------APRMPVVAQPRIVIDLAENARATVIEHW 205
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 307
G G + N+ +E+ +G+G K+ LQ HI A + +++++
Sbjct: 206 RGLAGETAF-VNATVEIRLGRGAKLTLIRLQTSGEKGFHIDRLASSIAGDAELDMIQIDM 264
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVA 365
GG+LSRH + V G L + + Q D S ++H CR Q K VA
Sbjct: 265 GGRLSRHTLDVALEGRGAAATLDGLFAIGAGQQTDTRSN--VEHRARDCRLSQTWKG-VA 321
Query: 366 HSLGQAVFDGNVKV 379
+ +F+G V V
Sbjct: 322 GGRARGIFNGRVHV 335
>gi|319786703|ref|YP_004146178.1| FeS assembly protein SufD [Pseudoxanthomonas suwonensis 11-1]
gi|317465215|gb|ADV26947.1| FeS assembly protein SufD [Pseudoxanthomonas suwonensis 11-1]
Length = 435
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 13/318 (4%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI--TRPSSSLDVSTD 125
P+ L R ++ LL+ P ++E +++T ++ P T P+ V
Sbjct: 18 PEAQELGPGRRAALDALLADGLPGPREEAWKYTPLRALERRGFAPADATAPAFDAGVLEG 77
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI-SEFQCGD-LFWS 183
P LV +G + +L+ LP G V +L V + R ++F+ ++ D +F
Sbjct: 78 IPAPRLVFANGRFDAAHSDLAGLPAGASVEALSQVLERGEPRDANFLLRRYERRDEVFAR 137
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
N A + V+ + AG ++ P++L ++ V + L R + + EG + I
Sbjct: 138 ANAALAEEGAVVRLDAGVRLPAPLHLVFVGVAQEGDRAWHL-----RHFIDLREGAALDI 192
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
+E +G G +N VL + GKG VRH+ +Q S A+ T + Y
Sbjct: 193 VEHQLGA-GEHANLSNDVLHLHAGKGAVVRHARVQADSARASRFARTDAVLARDAQYRRF 251
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKC 362
++ G LSRH ++V+ G L++ +L+ + + +RL +DH R L
Sbjct: 252 DLELGAALSRHELNVRLEG--DGARLTANGVLLGSGRRHVDTRLGIDHVARDTACDLLWR 309
Query: 363 IVAHSLGQAVFDGNVKVN 380
+A + VF G + +
Sbjct: 310 GIADGRSRVVFHGGINIR 327
>gi|33864857|ref|NP_896416.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
gi|33632380|emb|CAE06836.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
Length = 392
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 37/300 (12%)
Query: 90 PSRKDEPFRFTDTSMIK-------SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA 142
P+R+ EP+R TD ++ S+ + P+ P +S V +++DG Q
Sbjct: 23 PTRRQEPWRLTDLKRLEALARLPLSAVVAPLALPPASAGVHR-------LVLDG--QGDP 73
Query: 143 LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL-FWSINGMGAPDLGVIYVPAGC 201
L+ LP+G+ V S + + + + +CG W + A V+ +
Sbjct: 74 LDGVALPEGLSVLSAVELEQALGHTLD------RCGCAGSWPVELNHASARQVLALRVRG 127
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSV 261
V P+ L G ++ R+V+LVEE + +++ + +G + + V
Sbjct: 128 AV-APLELVLTGAAG---------LTATRIVLLVEEKASLDLLQ-VLQSDGASAH--SHV 174
Query: 262 LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQL 321
LEV +G+ ++RH L A+ + AV QE S Y V G L+R V Q+
Sbjct: 175 LEVHLGQEAQLRHGLLATADGQASLLAHLAVEQEPRSRYAFTSVVQGWDLARVEPRVVQV 234
Query: 322 GPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
TEL + +DQ H+ + D P G QL KC+ A A+F+G ++V R
Sbjct: 235 DGQATTELKGLAVSQADQQLATHTAVRFDGPEGELDQLQKCL-AGGRSHAIFNGAIQVPR 293
>gi|152995375|ref|YP_001340210.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
gi|150836299|gb|ABR70275.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
Length = 419
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 139/313 (44%), Gaps = 27/313 (8%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS----TDAQFPSLV 132
R + + L +T WP+RK E +R+T ++ +Q + I S +D+S D LV
Sbjct: 23 RAHALELLANTKWPTRKTEAWRYTPLRPVERTQAKVI---SDKIDLSPVAIADLSAIELV 79
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWSINGMG 188
++G + L LP+G+ + LG G ++ +D +S F +F +N
Sbjct: 80 FVNGQFDQAQLT-KTLPEGLSIS--LGGDLGSAQQ-ADALSVFSTIKPERHIFGLVNDAL 135
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A D+ VI V G ++ PI + L +G S+ RV V + G + +IE+ V
Sbjct: 136 AQDVVVITVAEGVEITQPIRISSLLSQGAE--------SHTRVQVALAAGSRLTVIED-V 186
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
+G + + +E + ++ H Q+ + I + + V G
Sbjct: 187 QAQGES--FNTAFVEYNVAANARLEHYRFAMQTGSNVAIGGSHFNLHDHAKMNSTIVGFG 244
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSL 368
LSR + + G + +L++ +LL + DLH+ + P G + +CIVA
Sbjct: 245 SDLSRLDTDIIHAGEFADAKLNAMYLLDGKELFDLHATVEHAMPNGKTEENVRCIVADR- 303
Query: 369 GQAVFDGNVKVNR 381
+A+F+G + ++R
Sbjct: 304 ARAIFNGRIHIHR 316
>gi|253996497|ref|YP_003048561.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
gi|253983176|gb|ACT48034.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
Length = 442
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 29/318 (9%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMI-KSSQIQPITRPSSSLDVSTDAQFPS----- 130
R ++ + + +PSR++E +++TD SMI K + P P + S++A+ +
Sbjct: 32 RKAAFKRFEAHGFPSRREEEWKYTDVSMISKRGTLAPDNIPP---EASSEAKLLAWSLSS 88
Query: 131 -----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
+V ++G N L +LP GV + SL + + + + +F ++N
Sbjct: 89 ERMHLMVFVNGHFDNGLSTLDDLPAGVQLSSLADMLEDGAELPKPLFQQQHEHTVFSALN 148
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D V+ + G ++ PIYL ++ G PR++V+ G IIE
Sbjct: 149 NAFVTDGAVLNIAPGIVLDKPIYLLLIASGHGTA-------IYPRIIVMAGAGTRATIIE 201
Query: 246 EFVGKEGNDCY-WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
++G D + + N+ ++ + G + H L + AAHI + S +
Sbjct: 202 HYMGTL--DAHNFTNATTQLNLDAGASIEHCKLTQEGPAAAHIAGIHAQLAEGSTFTSKS 259
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKC 362
GG+L R+++ P+ L +LL Q D H+R +DH C R+ ++
Sbjct: 260 FVFGGRLVRNDITASLNEPNCTCNLDGLYLLNDKQHVDHHTR--IDHRAASCTSREYYRG 317
Query: 363 IVAHSLGQAVFDGNVKVN 380
++ + VF+G V V+
Sbjct: 318 VLDGD-SRGVFNGKVVVH 334
>gi|268317574|ref|YP_003291293.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
gi|262335108|gb|ACY48905.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
Length = 444
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 30/323 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFT--DTSMIKSSQIQPI-TRPSSSLDVSTDAQFP 129
L LR + + +P RK E +++T ++ +I P+ P+ + D P
Sbjct: 35 LAALRRKAIERFGVLGFPGRKSEAWKYTPIAKALQHPYRIDPVPAVPALNEQALADYAIP 94
Query: 130 SL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL---- 180
L VL++G S+LP+GV + L + +R +D ++ L
Sbjct: 95 ELDAYRVVLVNGRFVPELSTTSDLPEGVVLTGL----EEAARRHADLFEKYFAHYLDFEN 150
Query: 181 --FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N A D +YVP G +E P+++ L +D+ + PR VV+ G
Sbjct: 151 EPFLALNTAFARDGFFLYVPEGTALERPVHVLNL------IDTDEELFLQPRNVVVAAPG 204
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+ ++ + + N V EV +G+G +V L+ + A+ I T E +
Sbjct: 205 ASLKLVTSGHSRAAQRTF-TNGVTEVFVGQGAEVHQYDLRLEGEAASGIFSTQAYLEGGA 263
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
Y ++ GG L R+NV+V+ D E E + + L + + + + ++DH +C
Sbjct: 264 RYTNGTLTLGGALVRNNVYVRF--DDQEGEANLYGLFLGRGSMHIDNHTMIDHAVPHCVS 321
Query: 357 RQLHKCIVAHSLGQAVFDGNVKV 379
+L+K I+ VF+G V V
Sbjct: 322 NELYKGILDDE-ATGVFNGKVLV 343
>gi|386015658|ref|YP_005933940.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis AJ13355]
gi|386079595|ref|YP_005993120.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea ananatis
PA13]
gi|327393722|dbj|BAK11144.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis AJ13355]
gi|354988776|gb|AER32900.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea ananatis
PA13]
Length = 425
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 137/320 (42%), Gaps = 55/320 (17%)
Query: 82 QTLLSTPWPSRKDEPFRFT-------------DTSMIKSSQIQPITRPSSSLDVSTDAQF 128
Q L+ P+RK E +++T + + ++Q+ ++ P ++
Sbjct: 35 QQLMRLGLPTRKHENWKYTPLDGLLAHHFVLPEAHELSATQVDALSLPLDAV-------- 86
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVG--SLLGVSDGIMKRVSDFISEFQCGDLFWSING 186
LV +DG Q G+ G L + + D + Q ++F +
Sbjct: 87 -RLVFVDGRFQ----------PGLSSGDTELFEIQHSVAAERRDLPAAVQP-EIFLHLTE 134
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
A ++ I + G P+YL L + G D + + R + +EE E +IE
Sbjct: 135 SLAEEVTHIRLARGKAAARPLYL--LHITSGKDDG--MNTVHHRHHLQLEESAEAEVIEH 190
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYE 301
FV + ++ + + ++RH+ L +S + H + Q T++ +
Sbjct: 191 FVTL-NDSAHFTGARFTFAVADNARLRHTKLAFESSKSYHFAHNDIVINRDAQVTSTSFL 249
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 359
L G LSRHN Q G +T+ L+S L V+ + D +R L+H +G+C RQ+
Sbjct: 250 L-----GAGLSRHNTSTQLNGENTQLSLNSLVLPVNQEVAD--TRTYLEHNKGHCLSRQM 302
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
HK IV G+AVF+G++KV
Sbjct: 303 HKTIV-RDKGRAVFNGHIKV 321
>gi|157370422|ref|YP_001478411.1| FeS assembly protein SufD [Serratia proteamaculans 568]
gi|157322186|gb|ABV41283.1| FeS assembly protein SufD [Serratia proteamaculans 568]
Length = 430
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 39/315 (12%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----IQPIT---RPSSSLDVSTDAQFPSLVL 133
Q L WP+RK E +++T + Q ++P+T R + +LD+ DA LV
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLEQQFLEPPLEPVTAAQRDALALDI--DAY--RLVF 91
Query: 134 IDGFIQNSALNLSNLPDGVY----VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
IDG ++AL+ S L D + G+L + + I ++F + A
Sbjct: 92 IDGRF-SAALSDSELGDYQFDVAPYGTLQALPEPIQ------------AEIFLHLTESLA 138
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
+ +I V AG E P+YL L + G ++ + R + + + +IE +V
Sbjct: 139 QETSIIRVAAGKIAERPLYL--LHISSGRGAEGEVNTVHHRHHLEIARNAQAEVIEHYVS 196
Query: 250 KEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
ND ++ + L +G +++H L +S + H + + + G
Sbjct: 197 L--NDAAHFTGARLTANVGDNAQLQHCKLAFESRPSYHFAHNDLVIGRDARVKSDSFLLG 254
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
L+RHN Q G + ++S L V + D +R L+H +GYC RQLHK +V+
Sbjct: 255 AGLTRHNTSAQLNGEGSNLTINSLVLPVGKEVCD--TRTYLEHNKGYCESRQLHKVVVS- 311
Query: 367 SLGQAVFDGNVKVNR 381
+AVF+G +KV +
Sbjct: 312 DRAKAVFNGMIKVAK 326
>gi|126665740|ref|ZP_01736721.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
gi|126629674|gb|EBA00291.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
Length = 433
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 148/337 (43%), Gaps = 34/337 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L S+ +LP+PL LR + + L P+R+ E ++++ + + ++ ++S
Sbjct: 12 LQSAGQALPEPLL--ALRANRASALTDLLLPTRRTENWKYSAKHLKLTDEMASSLPLNAS 69
Query: 120 LDVSTDAQFPSLVLIDGFIQNSALNLSNLP-------------DGVYVGSLLGVSDGIMK 166
D Q ++VL++G ++ A N L D LLG K
Sbjct: 70 AGAEADIQGYTVVLVNGVVRPEASNYPALEGLSIQRFSDLNGDDAELAADLLG------K 123
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+SD ++ +L +N D +I + G ++ P+++ + + +
Sbjct: 124 SISDQPAKHGSINLSL-LNAARFEDGLLIQLQPGTVLDQPLFVVH------HTSASHSGS 176
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
+ P ++V ++ ++E++V G N+ E +G G V L + N H
Sbjct: 177 AFPCILVAAGSNSQLTLVEDYV-SSGESPVMVNTATEFSLGDGANVTSVRLNTEGQNVQH 235
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
+ T VRQ+ S +E V GG L RH++HV+ G E +L+ ++V+ TQ +
Sbjct: 236 MGTTGVRQQRNSRFESHSVGFGGTLRRHDLHVRLEGEGAECKLNG--VVVTQGTQHYDNH 293
Query: 347 LLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
++H +C + ++ I A A+F+G + +++
Sbjct: 294 TTIEHIAAHCNSEESYRNIAADK-SHAIFNGRIHIHQ 329
>gi|110834728|ref|YP_693587.1| ABC transporter permease [Alcanivorax borkumensis SK2]
gi|110647839|emb|CAL17315.1| permease component of ABC-tranporter [Alcanivorax borkumensis SK2]
Length = 409
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 141/328 (42%), Gaps = 41/328 (12%)
Query: 63 SSSSLPQPLPLQKL----RDSSS----QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
S+SSL Q L Q L R+ S+ L + +P RK E +++T + + I
Sbjct: 4 SASSLAQELKTQALANAQRNGSAGDALAALQAASFPERKTESWKYTSLQALADGHLNAIA 63
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
D + P+L I N L NLPDGV + DG I+
Sbjct: 64 ------DGEINPPLPALSEHVVTINNGKLVDHNLPDGVTLSH-----DG------PAING 106
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
Q F+ N A V+ V A ++E PI+++ + S NPR+VV+
Sbjct: 107 LQTPFAFY--NSAVASQPIVLTVAANTRIEQPIHVQIQAA------SDTPAHCNPRLVVV 158
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ +G E +IE + N+V ++ ++ H LQ + + HI + Q
Sbjct: 159 LNQGAEAAVIEHY---HAQGKALTNAVTALITADNAQLTHYRLQGEQASTIHIGTLIIDQ 215
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--P 352
+ AS + ++ TG +L R++ V+ L + EL+ + V + +++ ++H P
Sbjct: 216 QGASKVDSYQLMTGNRLRRND--VRALMNKSGAELNMKGIFVVRDNSHVDNQMCVEHAVP 273
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
G Q K + A G+AVF+G + ++
Sbjct: 274 NGESDQNFKGL-AGERGKAVFNGRIHIH 300
>gi|387815488|ref|YP_005430978.1| FeS assembly protein SufD [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381340508|emb|CCG96555.1| FeS assembly protein SufD [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 428
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 21/328 (6%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SLP+PL LR + L+ P P+RK E ++++ + +K + I+ P+
Sbjct: 12 LHPAGESLPEPL--LALRKERASALVDMPLPTRKTENWKYS-SKYLKLADDMAISLPAEG 68
Query: 120 LDVSTDAQFP--SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC 177
P +V I+G + A +L DG+ + S +++G + +S +
Sbjct: 69 -KTGNSLAVPGYKVVFINGVMIPEASEYPDL-DGIEILSFNDLANGEAEALSAKLGSTLN 126
Query: 178 GDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
D F +NG D I + G ++ P+++ + + + PR+ V
Sbjct: 127 HDQVQFARLNGARFEDGLFIRLKPGAVLDQPLFIIH------ETSADASGSAYPRIYVEA 180
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
++ ++EE+ G ++V E + G V L + N HI T V Q+
Sbjct: 181 GANSQLTLVEEYTSS-GEASALVSTVTEFNLADGANVTSIRLNMEGENVQHIGATGVLQQ 239
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
+S +E V GG L RH++ V+ G ET+L+ + Q D H+ +DH +
Sbjct: 240 RSSRFESHCVGFGGPLRRHDLQVRLEGEGAETKLNGVVVTQGKQHYDNHTS--IDHVAAH 297
Query: 356 C--RQLHKCIVAHSLGQAVFDGNVKVNR 381
C + ++ I A AVF+G + +++
Sbjct: 298 CNSEETYRNIAADQ-SHAVFNGRIHIHQ 324
>gi|345302709|ref|YP_004824611.1| FeS assembly protein SufD [Rhodothermus marinus SG0.5JP17-172]
gi|345111942|gb|AEN72774.1| FeS assembly protein SufD [Rhodothermus marinus SG0.5JP17-172]
Length = 444
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 30/323 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFT--DTSMIKSSQIQPI-TRPSSSLDVSTDAQFP 129
L LR + + +P RK E +++T ++ +I P+ P+ + P
Sbjct: 35 LAALRRKAIERFGVLGFPGRKSEAWKYTPIAKALQHPYRIDPMPAVPALTEQALAGYAIP 94
Query: 130 SL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL---- 180
L VL++G S+LP+GV + L + +R +D ++ L
Sbjct: 95 ELDAYRVVLVNGRFVPELSTTSDLPEGVVLTGL----EEAARRHADLFEKYFAHYLDFEN 150
Query: 181 --FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N A D +YVP G +E P+++ L +D+ + PR VV+ G
Sbjct: 151 EPFLALNTAFARDGFFLYVPEGATLERPVHVFNL------IDTDEELFLQPRNVVVAAPG 204
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+ ++ + + N V EV +G+G +V L+ +S A+ I T E +
Sbjct: 205 ASLKLVTSGHNRTAQRTF-TNGVTEVFVGQGAEVHQYDLRLESEAASGIFSTQAYLEGGA 263
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
Y ++ GG L R+NV+V+ + E L F L D H+R +DH +C
Sbjct: 264 RYTNGTLTLGGALVRNNVYVRFDDQEGEAHLYGFFLGRGSMHIDNHTR--IDHAVPHCVS 321
Query: 357 RQLHKCIVAHSLGQAVFDGNVKV 379
+L+K I+ VF+G V V
Sbjct: 322 NELYKGILDDE-ATGVFNGKVLV 343
>gi|336172315|ref|YP_004579453.1| FeS assembly protein SufD [Lacinutrix sp. 5H-3-7-4]
gi|334726887|gb|AEH01025.1| FeS assembly protein SufD [Lacinutrix sp. 5H-3-7-4]
Length = 437
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 151/342 (44%), Gaps = 20/342 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + +++ P+ +R + +T +T +PS+K+E +++T I
Sbjct: 1 MDLKEKLVSSFLAFENTIDVESPVHDIRTEAIKTFETTGFPSKKEEAWKYTSLKNILKED 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLP-DGVYVGSLLGVS 161
+ ++L+ D ++ IDG + +LS++ DG+ V +
Sbjct: 61 YSVFPKQENALEYKDIKKYFIHDIDTYKIIFIDG---KYSSHLSHVTHDGIDVCLMSSAL 117
Query: 162 DGIMKR--VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+ R + ++ ++ D ++N + + I++P VE PI + + S GN
Sbjct: 118 NKPKYRPVIENYFNKIATKDSLSALNTAFSNEGAYIHIPKNKLVEKPIQIIHFST--GNE 175
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ L PR +++V+E V IIE N NSV E+ K V + +QN
Sbjct: 176 AALMLQ---PRNLIVVDENSHVQIIERHQSLTENPV-LTNSVTEIYGNKRAIVDYYKIQN 231
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+ NA+ I T V Q+ S + S GGKL R+N++ Q G ++ + ++ Q
Sbjct: 232 DNKNASLIDNTYVDQKEQSHCLVHTFSFGGKLIRNNLNFYQNGERIDSTMKGITIIGDKQ 291
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K I + + VF+G V V +
Sbjct: 292 HVDHNTLVHHIEPNCESHQDYKGIFSDN-ATGVFNGKVVVEK 332
>gi|407700820|ref|YP_006825607.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Black Sea 11']
gi|407249967|gb|AFT79152.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Black Sea 11']
Length = 418
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 145/329 (44%), Gaps = 51/329 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + + L + WP+R++E +RFT + ++ + +Q + P ++D +
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKREAKQAVQADSLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV +DG + + +N N+P G+ + SL + +S + + +F +N
Sbjct: 75 IDLVFVDGVLV-TQVNTLNVPAGMSITSLNNDDTATQQAISSVYGQVKPTRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG K++ P+ + +++ NVD+ + RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGVKIDTPV--RIVNMASQNVDA------HTRVVVKVAEGASATVIEQG 185
Query: 248 VGKE------------GNDCYWANSVLEVVIGKGGKV--RHSYLQNQS-LNAAHIKWTAV 292
G +D + + + GK ++ H L N++ LN+
Sbjct: 186 FGDTESLTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNS-------- 237
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
T GY G +LSR +V + G + ++++ +LL + DLHS + P
Sbjct: 238 ---TMVGY-------GSELSRLDVDIHHAGEFADAKMNAIYLLAEGELFDLHSTIEHAMP 287
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
G + + IV +AVF+G + ++R
Sbjct: 288 NGTTEENARGIVGDK-ARAVFNGRIHIHR 315
>gi|294664774|ref|ZP_06730100.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292605461|gb|EFF48786.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 420
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 145/312 (46%), Gaps = 22/312 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL------LGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
+G + +LS LP+GV + +L G + ++ R D E +F +N
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASGQAQQLLGRRFDGSDE-----VFARLNAAL 132
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A + +I V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 133 ADEGVLIRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL 187
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
G+ + NSV+ V + +G + H+ +Q S +A + T + Y+ V++ G
Sbjct: 188 -HVGDAAHLENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQRVDLELG 246
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHS 367
LSRH ++V+ G +L++ +L+ + + + +RL ++H R +L V
Sbjct: 247 AGLSRHELNVRLEG--NNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGAD 304
Query: 368 LGQAVFDGNVKV 379
+ VF G +++
Sbjct: 305 RSRVVFHGGIRI 316
>gi|407451526|ref|YP_006723250.1| hypothetical protein B739_0750 [Riemerella anatipestifer RA-CH-1]
gi|403312511|gb|AFR35352.1| hypothetical protein B739_0750 [Riemerella anatipestifer RA-CH-1]
Length = 426
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 151/341 (44%), Gaps = 33/341 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
SL +++ + SSSL + ++ + LS +PS+KDE +++T+ I Q Q +
Sbjct: 2 SLFENIKTHSSSLSGD------KLNALELFLSKGFPSKKDEEYKYTNLKEIIEKQYQFLP 55
Query: 115 RPSSSLDVST-------DAQFPSLVLIDGF-------IQNSALNLSNLPDGVYVGSLLGV 160
+ + + F +VL++G I + + + L + + G +
Sbjct: 56 QEEHHISEEELKALRLGEEDFDWVVLVNGKWRPELSKISDKDIKVLALDEALSNGESEAL 115
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+++ F +L ++ +G+ +YVP VE PI++ Y+S +
Sbjct: 116 FRPYFNTIANESWAFPNLNLAFAHSGVA------LYVPKNTVVEKPIHIFYISQ-----N 164
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ NPR +++VE G ++ +IE + + + NS+ E+ K LQN
Sbjct: 165 QSENTFYNPRNILVVEAGSQIEVIESHHNFDASFTF-TNSLTEIFTKPNAKADWHKLQND 223
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ + + T V+QE S + S GGKL R+N+ Q G + + ++ ++ DQ
Sbjct: 224 TDTSYLVDHTFVKQEKDSLATVNTFSFGGKLVRNNLDFIQEGENINSFMNGITIIGKDQL 283
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + + P Q +K + + VF+G V V++
Sbjct: 284 VDHHTAVHHNQPNCESYQNYKGVFKDN-AHGVFNGKVFVDK 323
>gi|436835812|ref|YP_007321028.1| FeS assembly protein SufD [Fibrella aestuarina BUZ 2]
gi|384067225|emb|CCH00435.1| FeS assembly protein SufD [Fibrella aestuarina BUZ 2]
Length = 439
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 153/349 (43%), Gaps = 30/349 (8%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
+F D V E E +S S+ Q +R S+ QT + +P+ + E +++++
Sbjct: 8 SFKDQLVAAFREGEERMNGASKSAFHQ------IRRSALQTFETLGFPTIRHEEWKYSNV 61
Query: 103 SMIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNL----SNLPDGVY 153
+ + + D Q P+L ++G + + ++L +
Sbjct: 62 KAMVGQAYAFDNGTALTADELGTLQIPNLEGNILYFVNGHYRADLSQIVSPATHLQIRSF 121
Query: 154 VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
+L ++ I S + ++FQ F ++N A D I VP VE P+ L++++
Sbjct: 122 AEALQTDAETIGLHFSRY-ADFQ-DSAFTALNTAFAYDGVFIRVPDNKVVEEPVILRFIT 179
Query: 214 -VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
V NV ++ PR ++++ +V I E + G+ + N V EVV+ +V
Sbjct: 180 DVRTQNVAAQ------PRNLIVIGRNADVKIAESY-RTIGDKAAFTNIVTEVVVAADARV 232
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 332
H +QN S HI T V Q S Y ++ G R+++++ G E + +
Sbjct: 233 EHYRVQNDSQQTNHICRTQVSQADNSHYYNATITLNGGFVRNDLNIVLNGEHCEAFM--Y 290
Query: 333 HLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
L + + TQ + + L+DH P Y +L+K I+ + G VF+G + V
Sbjct: 291 GLYMPNGTQHIDNHTLVDHAMPNSYSNELYKGIL-NDKGTGVFNGKIYV 338
>gi|397689345|ref|YP_006526599.1| Fe-S cluster assembly protein SufD [Melioribacter roseus P3M]
gi|395810837|gb|AFN73586.1| Fe-S cluster assembly protein SufD [Melioribacter roseus P3M]
Length = 447
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 149/320 (46%), Gaps = 24/320 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
L+K+R++S +P+ K+E +++TD S + ++ P+ PS T + LV
Sbjct: 33 LKKMRETSLAKFSEFDFPTNKNEEWKYTDVSFARKNKFNPL--PSERKTGYTKDEIKKLV 90
Query: 133 L----------IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LF 181
++G ++S D + +G+L G + + +++ + D LF
Sbjct: 91 FGGFDYNLITFVNGRYSAELSDISEDGDKIIIGNLNGFIESHGEIAGNYLGKISSEDNLF 150
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++NG+ D V+ + ++ P L+ L + G D ++ + PR +++ +
Sbjct: 151 HALNGVYMQDGVVVVLKENSELSKP--LQALFING---DPEENLLIAPRNLIVAGKNSRA 205
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
+I + G + Y+ + + E+++ + + +Q ++ ++ HI+ Q+ S
Sbjct: 206 SVIFNYYGG-SKESYFTDGITEIMLEEDSLIDVYKIQRENPSSYHIEKLQAIQKDGSVLN 264
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQL 359
++ GG+L R++++ + G + ET F+L +Q D H+ +DH P +L
Sbjct: 265 HYNLNFGGRLIRNDINSKLDGENIETHYYGFYLGKENQHIDNHT--FVDHAKPNSMSNEL 322
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
+K I+ S + VF+G + V
Sbjct: 323 YKGILDDS-ARGVFNGKIIV 341
>gi|58581026|ref|YP_200042.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84622943|ref|YP_450315.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577998|ref|YP_001914927.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58425620|gb|AAW74657.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84366883|dbj|BAE68041.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188522450|gb|ACD60395.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 420
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 144/310 (46%), Gaps = 18/310 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LPDGV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPDGVQLDTLSASLAASDDAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ V+ V G ++E P++L ++S+ G + S + R ++ + G + ++E +
Sbjct: 135 EGMVVRVRDGAQIELPLHLVFVSMAGEHDLSW-----HHRHLIELRAGAALQLVEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + NSV+ V + + + H+ +Q S +A + T + Y+ V++ G
Sbjct: 189 VGDAAHLENSVMHVHLAQDAALSHARMQANSAHATSLLRTDAVLARNARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH ++V+ G + +L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHELNVRLEG--SNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKV 379
+ VF G +++
Sbjct: 307 RVVFHGGIRI 316
>gi|406597511|ref|YP_006748641.1| cysteine desulfurase activator SufB [Alteromonas macleodii ATCC
27126]
gi|406374832|gb|AFS38087.1| cysteine desulfurase activator SufB [Alteromonas macleodii ATCC
27126]
Length = 418
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 145/329 (44%), Gaps = 51/329 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + + L + WP+R++E +RFT + ++ + +Q + P ++D +
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKREAKQAVQADSLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV +DG + + +N N+P G+ + SL + +S + + +F +N
Sbjct: 75 IDLVFVDGVLV-TQVNTLNVPAGMSITSLNNDDTATQQAISSVYGQVKPTRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG +++ PI + +++ NVD+ + RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGARIDTPI--RIVNMASQNVDA------HTRVVVKVAEGASATVIEQG 185
Query: 248 VGKE------------GNDCYWANSVLEVVIGKGGKV--RHSYLQNQS-LNAAHIKWTAV 292
G +D + + + GK ++ H L N++ LN+
Sbjct: 186 FGDTESLTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNS-------- 237
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
T GY G +LSR +V + G + ++++ +LL + DLHS + P
Sbjct: 238 ---TMVGY-------GSELSRLDVDIHHAGEFADAKMNAIYLLAEGELFDLHSTIEHAMP 287
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
G + + IV +AVF+G + ++R
Sbjct: 288 NGTTEENARGIVGDK-ARAVFNGRIHIHR 315
>gi|327404072|ref|YP_004344910.1| FeS assembly protein SufD [Fluviicola taffensis DSM 16823]
gi|327319580|gb|AEA44072.1| FeS assembly protein SufD [Fluviicola taffensis DSM 16823]
Length = 422
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 148/314 (47%), Gaps = 27/314 (8%)
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP------ 129
LR + + L T +P+ + E +++T + IK+S + P ++ + F
Sbjct: 26 LRQKALEILEQTAFPTTRTEAWKYTRVAKIKNSTLSVQENP-----ITVNGYFGLEENSI 80
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
V ++G ++ L+ + PDGV + L + + + + + G++F SIN
Sbjct: 81 QYVFVNGHF-SAELSSKSFPDGVKILPLSQMDEAEVLVLGRNVG--LDGEIFSSINTAYV 137
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D ++V A ++E P ++E +++ K ++N R V++ E +V +I+ +
Sbjct: 138 TDGLYVHVSAKMQIE-P------TIEIIQINTGKNILTNLRHVLVAEAFSKVQLIQRSLS 190
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
G + + N + E+ +GK V LQ + + + I V Q S + + V+ G
Sbjct: 191 VNGTENF-TNVISEIHVGKNAYVTIDKLQEEDESCSQISTELVNQHQDSNFTINTVTLNG 249
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHS 367
L R+N+ ++ G + ET L+ ++L +Q D H+ ++DH C +L+K ++
Sbjct: 250 ALVRNNLTIEVDGQNCETHLNGAYILNGNQHVDNHT--IVDHKVANCESFELYKGVI-DG 306
Query: 368 LGQAVFDGNVKVNR 381
AVF+G V V +
Sbjct: 307 KATAVFNGKVYVRK 320
>gi|399546249|ref|YP_006559557.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
gi|399161581|gb|AFP32144.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
Length = 433
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 148/337 (43%), Gaps = 34/337 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L S+ +LP+PL LR + + L P+RK E ++++ + + + ++S
Sbjct: 12 LQSAGQALPKPLL--ALRANRASALTGLLLPTRKTENWKYSAKHLKLTDDMASSLPLNAS 69
Query: 120 LDVSTDAQFPSLVLIDGFIQNSALNLSNLP-------------DGVYVGSLLGVSDGIMK 166
D Q ++VL++G ++ A N L D LLG K
Sbjct: 70 AGAEADIQGYTVVLVNGVVRPEASNYPALKGLSIQRFSDLDGDDAELAVDLLG------K 123
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+SD ++ +L S+N D +I + G ++ P+++ + + +
Sbjct: 124 SISDQPAKHGSINL-TSLNAARFEDGLLIQLQPGTVLDQPLFVIH------HTSASHSGS 176
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
+ P ++V ++ ++E++V G N+ E +G G + L + N H
Sbjct: 177 AFPCILVAAGSNSQLTLVEDYV-SSGESPVMVNTATEFSLGDGANITSVRLNTEGQNVQH 235
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
+ T VRQ+ S +E V GG L RH++HV+ G E +L+ ++V+ TQ +
Sbjct: 236 MGTTGVRQQRNSRFESHSVGFGGTLRRHDLHVRLEGEGGECKLNG--VVVTQGTQHYDNH 293
Query: 347 LLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
++H +C + ++ I A A+F+G + +++
Sbjct: 294 TTIEHVAAHCNSEESYRNIAADK-SHAIFNGRIHIHQ 329
>gi|381172330|ref|ZP_09881460.1| FeS assembly protein SufD [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
gi|380687174|emb|CCG37947.1| FeS assembly protein SufD [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
Length = 420
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 143/310 (46%), Gaps = 18/310 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + +IE
Sbjct: 135 EGVLVRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHR-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + NSV+ V + +G + H+ +Q S +A + T + Y+ V++ G
Sbjct: 189 VGDAAHLENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH +V+ G +L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHEFNVRLEG--NNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKV 379
+ VF G +++
Sbjct: 307 RVVFHGGIRI 316
>gi|83644265|ref|YP_432700.1| FeS assembly protein SufD [Hahella chejuensis KCTC 2396]
gi|83632308|gb|ABC28275.1| FeS assembly protein SufD [Hahella chejuensis KCTC 2396]
Length = 439
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 149/345 (43%), Gaps = 18/345 (5%)
Query: 42 ATFSDPFVIQLAESLEDSLPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFT 100
AT S+P+ + LE S S L L L +R P+RK E +R+T
Sbjct: 2 ATQSNPYADFHRQCLEAS-QSWGEQLGAGLRWLDDVRSEGRSLFAGLELPTRKTEAWRYT 60
Query: 101 DTSMIKSSQIQPITRPSSSLDV--STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL 158
+ I I + R + S D F +L +G + S ++ S L + + S
Sbjct: 61 PIAPIVQGDILRL-RTTESADAPQGITGDFYTLTFHNGQLTASDIDDSAL-EAIPFSSAD 118
Query: 159 GVSDGIMKRVSDFISE-FQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
++K +++ + F F ++N D +I V K P+ + + +
Sbjct: 119 AAGQALIK---EYLGKTFDAARHPFAALNAGTLQDGALIRVKKDSKALKPLQIVHTADVS 175
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
G+ S S RV+V+VE G ++ ++E +V + + N+V EV + + H
Sbjct: 176 GDPAS-----SYNRVIVVVEAGSKLELLETYVDTKERKVFQ-NTVTEVFLAANSTMTHYA 229
Query: 277 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 336
L + N H V Q+ S YE +TGG L R +++V+ LG +L+ +L
Sbjct: 230 LNCEGANQIHTGCVFVEQQGGSQYEQHAFATGGALKRRDINVKLLGQLASCKLNGVYLAG 289
Query: 337 SDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ D H+ + P + +K I+ + G+AVF+G V ++R
Sbjct: 290 GREHVDFHTTIEHVAPHCVSEETYKGII-NGKGKAVFNGRVHIHR 333
>gi|357416831|ref|YP_004929851.1| iron ABC transporter permease [Pseudoxanthomonas spadix BD-a59]
gi|355334409|gb|AER55810.1| iron ABC transporter permease [Pseudoxanthomonas spadix BD-a59]
Length = 420
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 151/313 (48%), Gaps = 21/313 (6%)
Query: 78 DSSSQTLL----STPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--L 131
DS+ +T+L + P++++E +++T ++ P+ + + +D + A P+ L
Sbjct: 15 DSARRTVLDEALAAGLPTQREEAWKYTSLRALERRSFAPV-QVAPPVDAAPIAHIPAPRL 73
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSL-LGVSDGIMKRVSDFIS-EFQCGD-LFWSINGMG 188
VL++G S +LS L DG+ V L +++G + F++ F+ GD +F +N
Sbjct: 74 VLVNGRHVESLSDLSGLADGISVQRLSQALAEG--GDAARFLARRFERGDEVFARLNAAL 131
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A + ++ AG + P+ L ++ G DS + R ++ + G ++ ++E +
Sbjct: 132 ATEGVLVRAEAGVQAATPLQLVFI----GAADSTDRAW-HLRHLIELRAGAQLRVVEHHL 186
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
G + AN++ V + +G ++ H+ LQ++S A + T + Y +++ G
Sbjct: 187 AA-GEHAHLANTLTHVHLAQGAQLVHARLQHESDKATSLLRTDAVLARETVYRRLDLELG 245
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHS 367
LSRH ++V+ G E + +L++ + L +RL +DH R L +
Sbjct: 246 AALSRHELNVRLEGEHARLEANG--VLLAGGRRHLDTRLGIDHIARDTGCALTWRGLGTG 303
Query: 368 LGQAVFDGNVKVN 380
G+AVF G + +
Sbjct: 304 RGRAVFHGGILIR 316
>gi|383190670|ref|YP_005200798.1| FeS assembly protein SufD [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371588928|gb|AEX52658.1| FeS assembly protein SufD [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 433
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 137/307 (44%), Gaps = 27/307 (8%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q +L +P K E +++T S + +Q + + +++ P LV +DG
Sbjct: 42 QQVLRLGFPHAKLEDWKYTPVSSLLGNQFFAPQQQALTVEKIKSLALPLDCYRLVFVDGR 101
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
S LS+ G + + ++ + + D I ++F + A D + +
Sbjct: 102 FDAS---LSDSDTGAF--EIEKLNAAAQQTLPDPIQ----SEVFLHLTESLAQDSFFVRL 152
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
PAG + E P+YL +LS G S+++ + R + +E G +IE ++ + ++
Sbjct: 153 PAGKQAEKPLYLLHLS--SGREQSREMNTVHHRYHLAIENGANAEVIEHYLSL-NDQGHF 209
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV---RQETASGYELVEVSTGGKLSRH 314
+ + V +G H L +S + H + R S + + G L+RH
Sbjct: 210 TGARMTVNVGDNADFTHYKLAFESQASFHFSHNDLVIGRDARVSSHSFL---LGAGLTRH 266
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
N Q G ++ +++S L V + D +R L+H +GYC QLHK IV + +A+
Sbjct: 267 NTSAQLNGENSNLDINSLVLPVDAEIAD--TRTYLEHNKGYCNSNQLHKVIV-NDRAKAI 323
Query: 373 FDGNVKV 379
F+G +KV
Sbjct: 324 FNGMIKV 330
>gi|238765285|ref|ZP_04626213.1| hypothetical protein ykris0001_43340 [Yersinia kristensenii ATCC
33638]
gi|238696508|gb|EEP89297.1| hypothetical protein ykris0001_43340 [Yersinia kristensenii ATCC
33638]
Length = 420
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 138/309 (44%), Gaps = 34/309 (11%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKS------SQIQPITRPSSSLDVSTDAQFPSLVLID 135
Q +L+ +PS K E +++T + + S + +L + DA LV ID
Sbjct: 31 QQVLALGFPSIKHEDWKYTPLERLFAHHFSFASVVDVTAAQRDNLSLLQDAH--RLVFID 88
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G A LS+ G Y L +++ + F + Q ++F + A + +
Sbjct: 89 G---RYAPELSDSECGPY--QLAHLTEN-----AQFPAAIQ-PEVFLHLTESLAQESLHV 137
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+PAG + P+YL ++S G S+ + S+ R + +E G + +IE FV
Sbjct: 138 RLPAGQHSDKPLYLLHISSGNG---SEVVNTSHYRHHLAIEAGAQAEVIEHFVSL-NEQP 193
Query: 256 YWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + L V +G ++ H L QS + AH R A Y + G L+
Sbjct: 194 HFTGARLTVSVGDNAELNHCKLAFEAPQSTHFAHNDLVLGRDARAKSYSFL---LGAGLT 250
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 251 RHNTSAQLNGEGASLSMNSLLLPIGREICD--TRTYLEHNKGYCDSRQLHKTIV-RERGK 307
Query: 371 AVFDGNVKV 379
AVF+G +KV
Sbjct: 308 AVFNGMIKV 316
>gi|448241978|ref|YP_007406031.1| FeS cluster assembly protein of SufBCD complex [Serratia marcescens
WW4]
gi|445212342|gb|AGE18012.1| FeS cluster assembly protein of SufBCD complex [Serratia marcescens
WW4]
gi|453065549|gb|EMF06510.1| FeS assembly protein SufD [Serratia marcescens VGH107]
Length = 428
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 137/308 (44%), Gaps = 25/308 (8%)
Query: 82 QTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSS-----SLDVSTDAQFPSLVLID 135
Q L WP+RK E +++T S+++ ++P P S +L + DA LV ID
Sbjct: 36 QQALRLGWPTRKHENWKYTPLESLLEQQFLEPQPAPVSAEQLDALALGIDA--CRLVFID 93
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G ++AL+ +L D + + G + + + ++F + A + +I
Sbjct: 94 GRY-SAALSDGDLGDYQFELTAYGTPQALPEPIQP--------EIFLHLTESLAQETSLI 144
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+PAG P+YL L + G + ++ + R + + G E +IE +V G
Sbjct: 145 RLPAGKIPARPLYL--LHISSGRGAAGEVNTVHHRHHLEIGRGAEAEVIEHYVSL-GEAA 201
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
++ + L + + H L +S + H + + + G L+RHN
Sbjct: 202 HFTGARLTANVADNAGLLHCKLAFESQPSYHFAHNDLVIGRDARVKSDSFLLGAGLTRHN 261
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 373
Q G ++S L V + D +R L+H +GYC RQLHK +V+ G+AVF
Sbjct: 262 TSAQLNGEGANLVINSLVLPVGKEICD--TRTYLEHNKGYCESRQLHKTVVS-DRGKAVF 318
Query: 374 DGNVKVNR 381
+G +KV +
Sbjct: 319 NGMIKVAK 326
>gi|296536719|ref|ZP_06898779.1| FeS assembly protein SufD [Roseomonas cervicalis ATCC 49957]
gi|296262950|gb|EFH09515.1| FeS assembly protein SufD [Roseomonas cervicalis ATCC 49957]
Length = 429
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 142/343 (41%), Gaps = 46/343 (13%)
Query: 54 ESLEDSLPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI-Q 111
E L LP Q LP L LR+ + + P+R+ E +++TD + + + +
Sbjct: 17 EGLRARLPG------QGLPWLTALRERGIEAFRALGLPTRRVEAWKYTDLAPVAQAGFAE 70
Query: 112 PITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD--GIMKRVS 169
P+T +L + A +V +DG + L+ S+ P +L G + R+
Sbjct: 71 PLTPVDGALPLPRAAAPKRIVFVDGRYRAD-LSDSDAPVKSLAANLPAAEGLLGSVARLD 129
Query: 170 DF------ISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
D + F+ G L I+ D GV+ V + P+
Sbjct: 130 DLPLVALNTALFEDGVL---IDLGPGEDGGVVEVLHVTLADRPV---------------- 170
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKE--GNDCYWANS-VLEVVIGKGGKVRHSYLQNQ 280
++PR +V + EG ++ +IE G G + +S V E +GK V H+ LQ +
Sbjct: 171 --AAHPRHLVRLAEGAKLVLIERAWGHGVGGTESRTLHSPVWEFAVGKAAHVTHARLQQE 228
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
SL+ H+ T R E Y+ + G KLSR HV GP L+ LL Q
Sbjct: 229 SLSGVHLATTFARVEAEGTYDSFLLHAGAKLSRSEAHVVLAGPKAAAHLNGAQLLADGQH 288
Query: 341 QDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
D + LDH C RQ K +++ + VF G + V++
Sbjct: 289 GDCTT--FLDHAAPDCPSRQTVKTVLSGK-SRGVFQGKIHVHQ 328
>gi|409399870|ref|ZP_11250078.1| FeS assembly protein SufD [Acidocella sp. MX-AZ02]
gi|409131015|gb|EKN00742.1| FeS assembly protein SufD [Acidocella sp. MX-AZ02]
Length = 366
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 32/296 (10%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS 146
T P+RK E +RFTD I S++ +++ D+ D FP V ++G + N+AL+ +
Sbjct: 2 TALPTRKLEAWRFTDLRQISSTEFGAPPAMAAAPDLP-DLPFPRFVFLNGTL-NAALSTA 59
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENP 206
Y V + Q IN A D I VP G
Sbjct: 60 F----AYAKPFAPVQE-------------QGAQPMALINAANAKDGINIEVPDGVDAGEV 102
Query: 207 IYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
+ + S P + +PR V + +G ++ IIE +G YW N++ ++
Sbjct: 103 LLISQAS--------GATPFAFHPRHRVTLGQGAKLTIIEI---DKGEGVYWQNALFDID 151
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
+ +G ++H LQ +S+ A +I R A+ YE ++ G KLSR + +G
Sbjct: 152 VAQGATLQHFRLQQESVEAFNITSIRARIAQAAAYEHFTLTLGAKLSRTEIEADLVGETA 211
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L++ LL Q D + + P RQ K ++A + VF G ++V++
Sbjct: 212 LAHLNAAQLLGGAQHGDFTTIIRHKAPNCPSRQTVKSVLAGK-ARGVFQGKIEVDQ 266
>gi|418519552|ref|ZP_13085604.1| ABC transporter permease [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410704996|gb|EKQ63475.1| ABC transporter permease [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
Length = 420
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 144/310 (46%), Gaps = 18/310 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 135 EGVLVRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + NSV+ V + + + H+ +Q S +A + T + Y+ V++ G
Sbjct: 189 VGDAAHLENSVMHVHLAQDAALSHARVQAGSAHATSLLRTDAVLARDARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH ++V+ G +L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHELNVRLEG--NNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKV 379
+ VF G +++
Sbjct: 307 RVVFHGGIRI 316
>gi|384418461|ref|YP_005627821.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461375|gb|AEQ95654.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 420
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 144/311 (46%), Gaps = 18/311 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALEDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LPDGV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPDGVQLDTLSASLAASDDAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V G ++E P++L ++S+ G + S + R ++ + G + ++E +
Sbjct: 135 EGMLVRVRDGAQIELPLHLVFVSMAGEHDLSW-----HHRHLIQLRAGAALQLVEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + NSV+ V + + + H+ +Q S +A + T + Y+ V++ G
Sbjct: 189 VGDAAHLENSVMHVHLAQDAALSHARMQANSAHATSLLRTDAVLARNARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH ++V+ G + +L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHELNVRLEG--SNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKVN 380
+ VF G +++
Sbjct: 307 RVVFHGGIRIR 317
>gi|307544376|ref|YP_003896855.1| Fe-S cluster assembly protein SufD [Halomonas elongata DSM 2581]
gi|307216400|emb|CBV41670.1| K09015 Fe-S cluster assembly protein SufD [Halomonas elongata DSM
2581]
Length = 448
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 17/301 (5%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALN 144
+P R+ E +++TD I + S + P L +DG + +
Sbjct: 41 FPHRRVEEWKYTDVRDIARNDFVLTENADFSPAAAAALTLPLDAHRLTFVDGVFAPALSD 100
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCK 202
L +LP+GV V L + + V + D F ++N + V+ +
Sbjct: 101 LGSLPEGVQVLPLSRALEENHEAVGGPLGRLTGVDFSSFAALNTAFMEEGAVVRLAPRTV 160
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG--EVGIIEEFVGKEGNDCYWANS 260
V+ PI L++LS G ++ +S+PR+ LVE GG E +IE VG E + N
Sbjct: 161 VDKPIVLQFLSRAG-----EQDVMSHPRI--LVEAGGRSEATLIEHHVG-EAEAANFTNL 212
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
V E+++ +G + H LQ L HI V Q S Y ++ GG L R+++ +
Sbjct: 213 VEEIILERGAILTHYKLQEAPLKDRHIASIHVEQARDSRYVSFNLNLGGGLVRNDLVSEL 272
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
G E + Q D H+ + + PR + R+ +K I+ VF+G V V
Sbjct: 273 NGEGAEAIYNGLFYGQGRQHVDNHTLVNHNAPRTFSRENYKGIL-DDRAHGVFNGKVIVK 331
Query: 381 R 381
R
Sbjct: 332 R 332
>gi|410098740|ref|ZP_11293716.1| FeS assembly protein SufD [Parabacteroides goldsteinii CL02T12C30]
gi|409221201|gb|EKN14152.1| FeS assembly protein SufD [Parabacteroides goldsteinii CL02T12C30]
Length = 450
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 141/304 (46%), Gaps = 24/304 (7%)
Query: 89 WPSRKDEPFRFTDTSMIKS----SQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQ 139
+PS K E +++TD + + I + P + DV P+L +++
Sbjct: 45 FPSVKSEDYKYTDVAQAFAPDYGVNINRLAIPVNPYDVFR-CDVPNLSTSLYFVVNDTFY 103
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
+ + ++LP+GVY G L ++ + + + + D ++N M A D V+YV
Sbjct: 104 DKMMPKAHLPEGVYAGGLKNFAEQYPEVAACYYGKAAKSSHDGIIALNTMLAQDGFVLYV 163
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-Y 256
P G VE PI L +++ +VD+ ++N R++V++E E ++ +D +
Sbjct: 164 PEGVAVERPIQL--INIFRSDVDT----MANRRILVIMEPRSEAKLL--VCDHSIDDVKF 215
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
A V+E+ G+G + L+ S++ + V+QE +S + ++ L+R+N
Sbjct: 216 LATQVVEIFAGEGAYFDYYDLEESSISTSRFASVYVKQEASSNVLVNGITLNNGLTRNNY 275
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV-AHSLGQAVFDG 375
+++ G ET L ++ +Q D +S + P +L K ++ H++G F G
Sbjct: 276 YIELNGEYAETTLCGMSVMDHEQQVDTYSHITHAVPNCTSNELFKNVLDDHAVG--AFSG 333
Query: 376 NVKV 379
+ V
Sbjct: 334 RILV 337
>gi|325286420|ref|YP_004262210.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
gi|324321874|gb|ADY29339.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
Length = 455
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 149/341 (43%), Gaps = 25/341 (7%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ +R + + + +PS+K+E +++T + ++
Sbjct: 20 LKDKLVSSFLAFENNVDVHNPVHDVRTEAIKNFETKGFPSKKEEAWKYTSLNSLQKIDFS 79
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLP-DGVYVGSL-LGVSD 162
+ SSL+ ++ +V +DG + NLS DGV + + ++
Sbjct: 80 IFPKKESSLEYKDVKKYFIHQIDTYKIVFVDGVYSS---NLSETTHDGVDICLMSAALTK 136
Query: 163 GIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ K V D F D ++N + + IY+P + PI + + S GN
Sbjct: 137 PMYKAVIDVYFNKVASKDDSLTTLNTAFSREGAYIYIPKNKVPKKPIEIIHFST--GNDA 194
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ L PR +++ EE E+ IIE N+ N V E+ K V + +QN
Sbjct: 195 ALMLQ---PRNLIIAEENSEMQIIERHQSLTSNEV-LTNCVTEIFAAKNAIVDYYKVQND 250
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+A+ I T V Q+ S ++ S GGKL R+N++ Q G ++ + ++ Q
Sbjct: 251 VDSASLIDNTYVDQKDGSHVKVHTFSFGGKLMRNNLNFYQNGERIDSTMKGITIIGDKQH 310
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + P Q +K I A S VF+G + V++
Sbjct: 311 VDHHTLVHHIEPNCESHQDYKGIYADS-ATGVFNGKIIVDK 350
>gi|288800581|ref|ZP_06406039.1| FeS assembly protein SufD [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332794|gb|EFC71274.1| FeS assembly protein SufD [Prevotella sp. oral taxon 299 str.
F0039]
Length = 461
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 156/351 (44%), Gaps = 41/351 (11%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
IQL E+ ++ L +S+ + R + Q P RKDE +++TD I +
Sbjct: 22 IQLFEAEQNLLCQNSAP-----AMNAKRAEALQHFKQLGIPQRKDERYKYTDMQAIFAPD 76
Query: 110 I------QPIT-RPSS--SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
P + RP S DV + ++ D F NS L +LP+GV V SL
Sbjct: 77 YGLNLHRMPFSFRPEEVFSCDVPNLSTAVYFLMNDVFDVNS-LPKGHLPEGVVVDSL--- 132
Query: 161 SDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
+ +K DFI ++ D ++N M A D ++YVP KVE I + +++
Sbjct: 133 KEYALKN-PDFIEKYYAKLAATDKDGIAALNTMLAQDGLLVYVPKNTKVEKTI--QVINI 189
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVR 273
+VD + N RV+++VE G EV ++ F ND Y A V+E +G+ +
Sbjct: 190 MRSDVD----LMLNRRVLIVVEPGAEVKML--FCDHTANDRNYLATQVIEAYVGENASLD 243
Query: 274 HSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFH 333
++ S N + Q + S ++ ++R+ ++ G E L +
Sbjct: 244 LYCMEETSYNNKRVSNAYFDQASNSRLTHHVITLHNGVTRNTTSLRFSGEGAECNL--YG 301
Query: 334 LLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV-AHSLGQAVFDGNVKVNR 381
+++D+ Q + + L+DH +C +L+K ++ HS G F G V V +
Sbjct: 302 CVIADKQQHVDNNTLIDHAVPHCTSNELYKYVLDGHSTG--AFAGRVLVQK 350
>gi|399024661|ref|ZP_10726692.1| FeS assembly protein SufD [Chryseobacterium sp. CF314]
gi|398079958|gb|EJL70791.1| FeS assembly protein SufD [Chryseobacterium sp. CF314]
Length = 441
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 145/339 (42%), Gaps = 20/339 (5%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKL---RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+L D + + S + L + L R ++ Q +T +P++KDE +++T I
Sbjct: 8 ALYDQIIDNHSEFLESLHHRFLDGDRKAALQRFENTGFPTKKDEEYKYTSLKEITEKDYN 67
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ S ++ + F +V ++G + +S + + ++ ++D
Sbjct: 68 FFPKESHNITKEQLEELHLGEENFDWIVFVNGKLHKELSKIS-IENVEFLSFNYALNDAK 126
Query: 165 MKRVSD-FISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
K V + + + D F ++N + VP +E PI++ YLS + +
Sbjct: 127 HKEVFETYFNTIATKDSAFTNLNLAYCKYGFFLKVPKDVVIEKPIHVFYLSQ-----NQE 181
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+ N R +++VEEG +V +IE + N + NSV E+ K LQN +
Sbjct: 182 ENTFYNTRNLLIVEEGAKVEVIESHHNFD-NSYVFTNSVTEIFTYPNAKADWHKLQNDND 240
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
+ I T RQE S + S GGKL R+N+ G + + ++ ++ DQ D
Sbjct: 241 TSYLIDNTFARQEKDSLTTVNTFSFGGKLVRNNLDFIHNGQNINSFMNGITIIGKDQLVD 300
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
H+ + + P Q +K I VF+G V V++
Sbjct: 301 HHTAVHHNQPNCESYQNYKGIFKDK-AHGVFNGKVFVDK 338
>gi|386824747|ref|ZP_10111876.1| FeS assembly protein SufD [Serratia plymuthica PRI-2C]
gi|386378192|gb|EIJ19000.1| FeS assembly protein SufD [Serratia plymuthica PRI-2C]
Length = 428
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 138/311 (44%), Gaps = 31/311 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----IQPIT---RPSSSLDVSTDAQFPSLVL 133
Q L WP+RK E +++T + Q I+PIT R + +LD+ DA LV
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLEQQFLEPRIEPITAAQRDALALDL--DAY--RLVF 91
Query: 134 IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLG 193
+DG N+AL+ S+L + + + G + + + ++F + A +
Sbjct: 92 VDGRF-NAALSDSDLGEYQFDVTPYGTPQALPEPIQP--------EIFLHLTESLAQETS 142
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I V AG P+YL L + G ++ + R + V +IE +V N
Sbjct: 143 MIRVAAGKIAARPLYL--LHISSGRGVMGEVNTVHHRHHLDVARNARAEVIEHYVSL--N 198
Query: 254 D-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
D ++ + L IG ++RH L +S + H + + + G L+
Sbjct: 199 DAAHFTGTRLTASIGDNAELRHCKLAFESQASYHFAHNDLVIGRDARVKSDSFLLGAGLT 258
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RHN Q G + ++S L V D +R L+H +GYC RQLHK +V+ +
Sbjct: 259 RHNTSAQLNGEGSNLMINSLVLPVGKDVCD--TRTYLEHNKGYCESRQLHKTVVS-DRAK 315
Query: 371 AVFDGNVKVNR 381
AVF+G +KV +
Sbjct: 316 AVFNGMIKVAK 326
>gi|114776744|ref|ZP_01451787.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
gi|114552830|gb|EAU55261.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
Length = 416
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 140/321 (43%), Gaps = 33/321 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK---------SSQIQPITRPSSSLDVS 123
LQ +RD + Q + P+ +DE +++TD S I+ S+ +P +S +
Sbjct: 5 LQHIRDEAWQAFEARGLPTTRDEDWKYTDISRIQALLGDQWWQSAATEPCD-AASFVIAK 63
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
DA +V+++G A S+LP V V SL + ++VS+ I+ D F S
Sbjct: 64 LDAY--RVVIVNGHFDAQA---SDLPASVSVKSLAAMIQDEPEQVSELITYRD--DAFLS 116
Query: 184 -----INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
N A D I VP +++ PI++ L+V G ++ R + + +
Sbjct: 117 NGIVAANSALASDGACICVPDNTRLDKPIHI--LNVNSGGT-------THLRTGIHIGKQ 167
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+ IIE F G N+ +V + + +G ++ H LQ ++ H+ + Q+ S
Sbjct: 168 AQAEIIEHFAGNH-NNSGLTTAVTAIRLLEGARIEHYRLQMEAPKQCHLGRVEITQQRDS 226
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
L GG +SR +V V+ L+ + + Q D H+R+ + P R+
Sbjct: 227 SCTLHATEIGGMISRADVVVRLQQAGASCTLNGLFVAANRQHIDHHTRIDHNAPHCTSRE 286
Query: 359 LHKCIVAHSLGQAVFDGNVKV 379
++ ++ VF+G + V
Sbjct: 287 NYRAVL-DGRSHGVFNGKIVV 306
>gi|289671185|ref|ZP_06492260.1| FeS assembly protein SufD [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 420
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 141/310 (45%), Gaps = 18/310 (5%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPALVDAAALDDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGV----YVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
+G + +LS LPDG+ + SL D R F ++F +N A
Sbjct: 78 NGRPSEALSDLSPLPDGMQLDTFSASLAAGDDAQQLRGRRFDG---SDEIFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V G ++E P++L ++SV G + S + R ++ V G + ++E +
Sbjct: 135 EGVLVRVRDGAQIELPLHLVFVSVTGEHDLSW-----HHRHLIEVRAGAALQVVEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + NSV+ V + + + H+ +Q S +A + T + Y+ V++ G
Sbjct: 189 VGDAAHLENSVMHVHLAQDAALSHARMQANSAHATSLLRTDAVLARNARYQRVDLELGAG 248
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLG 369
LSRH ++V+ G + +L++ +L+ + + + +RL ++H R +L V
Sbjct: 249 LSRHELNVRLEG--SNAQLTANGVLLGNGRRQVDTRLGIEHIARDTACELVWRGVGADRS 306
Query: 370 QAVFDGNVKV 379
+ VF G +++
Sbjct: 307 RVVFHGGIRI 316
>gi|399949807|gb|AFP65464.1| Fe-S cluster assembly protein SufD [Chroomonas mesostigmatica
CCMP1168]
Length = 486
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 156/364 (42%), Gaps = 24/364 (6%)
Query: 32 RVSLQTTF-PQATFSDPFVIQLAESLEDSLPSS--------SSSLPQPLPLQKLRDSSSQ 82
++SL+ +F + F D F + L+ S S S + + + LR
Sbjct: 33 KISLKNSFFRKKFFYDSFKMNTIRKLDSSTDKSKWLDSILLSKKVKKTSFINNLRKIGLT 92
Query: 83 TLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS---TDAQFPSLVLIDGFIQ 139
L +T PS+KDE +RFT + + + I + VS + +V I+G
Sbjct: 93 LLKNTRIPSKKDESWRFTSLDQLFNMEFSDIIVEENDDFVSKYIMENSVARIVFINGVFS 152
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSINGMGAPD-LGVIY 196
+L + + + K++S I + + G F+ I M D + V+
Sbjct: 153 FKFSSLDPISKKFLLQKFSELDIEKQKKISKLIGKGESGINGGFFPILNMACLDEIVVLS 212
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+ + ++E PI + + + N P+ N +++VL E+ + +IE+ V + ++
Sbjct: 213 LSSDLRLEKPIQIVFAGSKTKN------PVCLNQKIIVLGEKHAKATVIEQHVSSDDSE- 265
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
++ NS + + +G ++ + S A+ + + S + S GG LSR +
Sbjct: 266 FFDNSTTNIFLEEGAELNYVVSNQISQKASIVLSIHAELQKNSSLNFLSASIGGFLSRMS 325
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDG 375
+ + G + + + ++Q D+HSR+ ++P QLHK +V+ AVF G
Sbjct: 326 LGIDLNGSGSNCNIQGITVASNNQLSDIHSRISHNYPYSTSSQLHKNLVSGK-ASAVFAG 384
Query: 376 NVKV 379
V+V
Sbjct: 385 KVQV 388
>gi|291617270|ref|YP_003520012.1| SufD [Pantoea ananatis LMG 20103]
gi|291152300|gb|ADD76884.1| SufD [Pantoea ananatis LMG 20103]
Length = 425
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
++F + A ++ I + G P+YL L + G D + + R + +EE
Sbjct: 127 EIFLHLTESLAEEVTHIRLARGKAAARPLYL--LHITSGKDDG--MNTVHHRHHLQLEES 182
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----R 293
E +IE FV + ++ + + ++RH+ L +S + H +
Sbjct: 183 AEAEVIEHFVTL-NDSAHFTGARFTFAVADNARLRHTKLAFESSKSYHFAHNDIVINRDA 241
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
Q T++ + L G LSRHN Q G +T+ L+S L V+ + D +R L+H +
Sbjct: 242 QVTSTSFLL-----GAGLSRHNTSTQLNGENTQLSLNSLVLPVNQEVAD--TRTYLEHNK 294
Query: 354 GYC--RQLHKCIVAHSLGQAVFDGNVKV 379
G+C RQ+HK IV G+AVF+G++KV
Sbjct: 295 GHCLSRQMHKTIV-RDKGRAVFNGHIKV 321
>gi|381404716|ref|ZP_09929400.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea sp. Sc1]
gi|380737915|gb|EIB98978.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea sp. Sc1]
Length = 426
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 24/305 (7%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI----QPITRPSSSLD-VSTDAQFPSLVLIDG 136
Q L+ P+RK E +++T + S Q P T + +D ++ LV +DG
Sbjct: 35 QQLMRVGLPTRKHENWKYTPLDTLLSQQFVLPDAPQTLSAEQVDALALPLDAIRLVFVDG 94
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIY 196
Q + LS+ G L + + + Q ++F + A ++ +
Sbjct: 95 QFQAA---LSSRDTG-----LFEIQHSVAAERHPLPAAVQP-EVFLHLTESLAEEVTTLR 145
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY 256
+ G P+YL L + G + + R + +EE E +IE +V + +
Sbjct: 146 LARGKSAARPVYL--LHITSGQ--QTGMNTVHYRHHLQLEESAEAEVIEHYVSL-NDQAH 200
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
+ S IG K+ H+ L +S N+ H + + G LSRHN
Sbjct: 201 FTGSRFTCAIGDNAKLTHTKLAFESSNSYHFAHNDLVVGNDAQVSSTSFLLGAGLSRHNT 260
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 374
Q G ++ ++S L V + D +R L+H +G+C RQ+HK IV G+AVF+
Sbjct: 261 STQLNGENSTLAINSLVLPVKQEVAD--TRTYLEHNKGHCVSRQMHKTIV-RDKGRAVFN 317
Query: 375 GNVKV 379
G++KV
Sbjct: 318 GHIKV 322
>gi|254428157|ref|ZP_05041864.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
gi|196194326|gb|EDX89285.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
Length = 409
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 138/328 (42%), Gaps = 41/328 (12%)
Query: 63 SSSSLPQPLPLQKLRDSSSQ--------TLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
S+SSL Q L Q L ++ L + +P RK E +++T + + I
Sbjct: 4 SASSLAQELKTQALANAQRSGSEGDALAALEAANFPERKTERWKYTSLQALADGHLNAIA 63
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
D P+L I N L NLPDGV + DG I+
Sbjct: 64 ------DGEISQPLPALSEHVVTINNGQLVSHNLPDGVTLSH-----DG------PAING 106
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
Q F+ N A V+ V A ++E PI+++ S S NPR+VV+
Sbjct: 107 LQTPFAFY--NSAVASQPVVLTVAANTRIEQPIHVQIQSA------SDAPAHCNPRLVVV 158
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ +G E +IE + G N+V +V ++ H LQ + ++ HI + Q
Sbjct: 159 LNQGAEAAVIEHY---HGQGEALTNAVTALVTADNAQLTHYRLQGEQASSLHIGTLIIDQ 215
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 354
+ S + ++ TG +L R++ V+ L + EL+ + V + ++L ++H
Sbjct: 216 QGISKVDSYQLMTGNRLRRND--VRALVSKSGAELNMKGIFVVRDKTHVDNQLCVEHSVP 273
Query: 355 YCR--QLHKCIVAHSLGQAVFDGNVKVN 380
C Q K + + G+AVF+G + ++
Sbjct: 274 NCESDQNFKGLAGEN-GKAVFNGRIHIH 300
>gi|297622510|ref|YP_003703944.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
gi|297163690|gb|ADI13401.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
Length = 437
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 138/335 (41%), Gaps = 48/335 (14%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF 128
+P L R ++ +T + PWP+ +DE +R+T + ++ +T P D + +
Sbjct: 21 EPAWLASERRAAWRTFEALPWPTNRDEAWRYTQLERFSLAGLELVTAPR---DRAVSERI 77
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC---GDLFWSIN 185
++ + D + + + + +Y S L + I + + E + L+ +N
Sbjct: 78 -TMRITDSDAEGALVYKGG--EAIYRDSKLKEAGVIFTDLRTALKEHEALVRAHLYSVVN 134
Query: 186 GMGAPDLGV----------IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
+ + ++VP +V+ P+ + + GG ++ PR ++++
Sbjct: 135 ATQSKYAALSAALWQNGTFLFVPKNTEVKLPLGAFHTADAGG--------LTAPRTLIVL 186
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
E I+E+ E + +A+ +E+++ G K+R+ LQN S AH+ E
Sbjct: 187 EPNAHATFIDEYTSDEFGERLFASGSVEIILQDGAKLRYVSLQNWSRTVAHVSRIRAHLE 246
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S E + VS G +R V GP +E+E+ L +D+ Q H Y
Sbjct: 247 RNSRLESLTVSLGADAARAEVECVMAGPGSESEM--LGLYFADKGQ---------HFNQY 295
Query: 356 CRQLHKCIVAHS----------LGQAVFDGNVKVN 380
Q H AHS AV+ G ++V+
Sbjct: 296 TLQHHAADHAHSDLLFKGALRDASTAVYSGLIQVD 330
>gi|407688453|ref|YP_006803626.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291833|gb|AFT96145.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 418
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 144/329 (43%), Gaps = 51/329 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + + L + WP+R++E +RFT + ++ + +Q + P ++D +
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKREAKQAVQADSLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV +DG + + +N ++P G+ + SL + +S + + +F +N
Sbjct: 75 VDLVFVDGVLV-TQVNTLDVPAGMSITSLNNDDTATQQAISSVYGQVKPTRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG K++ P+ + +++ NVD+ + RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGAKIDTPV--RIVNMASQNVDA------HTRVVVKVAEGASATVIEQG 185
Query: 248 VGKE------------GNDCYWANSVLEVVIGKGGKV--RHSYLQNQS-LNAAHIKWTAV 292
G +D + + + GK ++ H L N++ LN+
Sbjct: 186 FGDTESLTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNS-------- 237
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
T GY G +LSR +V + G ++++ +LL + DLHS + P
Sbjct: 238 ---TMVGY-------GSELSRLDVDIHHAGEFANAKMNAIYLLAEGELFDLHSTIEHAMP 287
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
G + + IV +AVF+G + ++R
Sbjct: 288 NGTTEENARGIVGDK-ARAVFNGRIHIHR 315
>gi|114319888|ref|YP_741571.1| FeS assembly protein SufD [Alkalilimnicola ehrlichii MLHE-1]
gi|114226282|gb|ABI56081.1| Iron-regulated ABC transporter permease protein SufD
[Alkalilimnicola ehrlichii MLHE-1]
Length = 441
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 135/322 (41%), Gaps = 24/322 (7%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV------- 122
P L+ R ++ + +P+R+ E +R ++ + +Q RP+ +L V
Sbjct: 25 PDWLEARRQAAIEAFERMGFPTRRWEAWR----NIKLDALLQHHYRPAETLGVAPQVLQE 80
Query: 123 --STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD--GIMKRVSDFISEFQCG 178
S P LV IDG LP+G+ V L D + + ++ Q
Sbjct: 81 AISVAPDAPRLVFIDGVFSPQHSTPDALPEGLTVKPLSEALDEADVQQHLAAHADYEQ-- 138
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N A ++VP G VE + + + G + S PRV+V EE
Sbjct: 139 HPFIALNTAFARQGVYVHVPRGQAVEQEVLFIFACSDAGADRA-----SWPRVLVHAEES 193
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
E +IE G +G+ Y A+ V E++ VR LQ + +A H+ + +
Sbjct: 194 AECRLIEWHGGPDGS-AYLASPVTEIIAEANANVRLDRLQREGADAFHLGAVHAEADRDA 252
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
+ + GG++SR + + G E ++ +L + D H+ + D G+ Q
Sbjct: 253 RVHVQNFNFGGRISRVDYYGLLKGTAAEVIINGLYLGDRKRFTDQHTWMTHDCEHGHSSQ 312
Query: 359 LHKCIVAHSLGQAVFDGNVKVN 380
L K I+ +AVFDG +KV
Sbjct: 313 LFKGILKDK-AEAVFDGLLKVE 333
>gi|284035108|ref|YP_003385038.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
gi|283814401|gb|ADB36239.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
Length = 441
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 158/349 (45%), Gaps = 25/349 (7%)
Query: 42 ATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD 101
A+++D F QL S D+ + + PL +LR ++ + +P+ + E +++++
Sbjct: 6 ASYND-FKEQLLASFRDNEERMNGE--RKSPLHQLRRAALKQFEQLGFPTIRHEEWKYSN 62
Query: 102 -TSMIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVG 155
S+IK T ++ D++ + P+L ++G L + + V +
Sbjct: 63 VNSLIKEDFALDATSSLTAEDLAP-LEIPNLEGNILYFVNGIYHPELSRLVSPSEQVQIT 121
Query: 156 SLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
SL + V + + F ++N A D V+ VPA VE PI L++++
Sbjct: 122 SLAEAIKADPEFVGTHFAHYADYQDSAFTALNTAMASDGVVVRVPANTTVEQPIILRFIT 181
Query: 214 VEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
D++ I S PR ++++ + EV + E + G + N V E+V+ + ++
Sbjct: 182 ------DARVNNITSQPRNLIVIGKNAEVMMAESY-RTLGEKSSFVNVVTEIVLDRDARM 234
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 332
++ + N++ A HI T V Q S + ++ G R+N+++ G E +
Sbjct: 235 QYYKVLNETAKAYHIGTTQVHQSDNSHFYSASITLNGHFVRNNLNIVLNGQHAEAFMYGL 294
Query: 333 HLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
++ Q D H+ L+DH P Y +L+K I+ + VF+G + V
Sbjct: 295 YMPNGRQHVDNHT--LVDHAMPNSYSNELYKGILDDN-STGVFNGKIFV 340
>gi|420258414|ref|ZP_14761148.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|404514140|gb|EKA27941.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 443
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +PAG + P+YL ++S G S+ + S+ R + +E + +IE FV
Sbjct: 160 IRLPAGKHSDKPLYLLHISSGKG---SEVVNTSHYRHHLAIEASAQAEVIEHFVSL-NEQ 215
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G+ ++ H L QS + AH R A Y + G L
Sbjct: 216 PHFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGL 272
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G
Sbjct: 273 TRHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTIV-RERG 329
Query: 370 QAVFDGNVKV 379
+AVF+G +KV
Sbjct: 330 KAVFNGMIKV 339
>gi|389774347|ref|ZP_10192466.1| FeS assembly protein SufD [Rhodanobacter spathiphylli B39]
gi|388437946|gb|EIL94701.1| FeS assembly protein SufD [Rhodanobacter spathiphylli B39]
Length = 439
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 25/293 (8%)
Query: 44 FSDPFVIQLAESLEDS-LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
+ P + L ESL D+ LP+S + L R S ST P + E +++T
Sbjct: 1 MTQPATLPLVESLLDAPLPASGIAW-----LDAARQESRDAFASTGLPDTRVEAWKYTAL 55
Query: 103 SMIKSSQIQ--PITRPSSSLDVSTDA----QFPSLVLIDGFIQNSALNLSNLPDGVYVGS 156
+ + T ++D S A + LV ++G + L LPDG+ +
Sbjct: 56 RGLAQRRFAHGDATASGRAVDPSLLALPGVEGARLVFVNGVFRADLSTLDALPDGLTLQP 115
Query: 157 LLGVSDGIMK-------RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYL 209
L V + R + D F IN A D V+ V A + P+ L
Sbjct: 116 LSRVLKDDAEPLRFGWSRSATRAEAHGAADAFARINAASAADGMVLRVAARATIAAPVQL 175
Query: 210 KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKG 269
++ +G +L + R ++ + EG + +IE+ +G +G A V ++ +G G
Sbjct: 176 VFIGADG----EGELAW-HARNLIELGEGASLTLIEQHLG-DGGQAQLATFVSDIHVGAG 229
Query: 270 GKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
K+ H LQN + A I+ + +R + S L V GG L RH++ V+ LG
Sbjct: 230 AKLHHVTLQNAASAANLIRHSHLRLQARSEATLHVVELGGALVRHDLQVELLG 282
>gi|350553961|ref|ZP_08923110.1| FeS assembly protein SufD [Thiorhodospira sibirica ATCC 700588]
gi|349789269|gb|EGZ43233.1| FeS assembly protein SufD [Thiorhodospira sibirica ATCC 700588]
Length = 437
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 130/308 (42%), Gaps = 29/308 (9%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRP----SSSLDVSTDAQFPS--LVLIDGFIQNSA 142
+P + E +++T +K+ + ++ L+ T PS LV +DG Q +
Sbjct: 41 YPDPRHEEWKYTKLRTLKNQSFVTASHAPMLDAADLERCTWPDLPSHRLVFVDGIYQPAL 100
Query: 143 LNLSNLPDGVYVGSL--------LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV 194
+LP GV + SL +G+ + V S F +L +G +
Sbjct: 101 SEPGDLPAGVQITSLAQAIAAGAVGLETVLGTLVDAQYSSFAAWNLAQLFDG------AL 154
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
I + ++ P++L ++ ++ P I +P V+ +G + I+E +G G
Sbjct: 155 IQLAPDTCLQQPVHLLFIH------SAQPTPQIYHPHSVIQAGQGSKAHILEHHIGLPGA 208
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
+ NS E+ + + H+ LQ S + HI +R + S ++ GG+L+R
Sbjct: 209 QGF-CNSATEIHLSANATLEHTLLQEHSEASYHIGNLFIRAQRDSRLISHNINLGGRLTR 267
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 373
H+++V P E L+ ++ Q D H+R+ P + + I A G+ VF
Sbjct: 268 HDLNVDLCEPGAEAVLNGLFVVGGTQHTDTHTRIHHRAPHTRSDETYHGI-ADDQGRGVF 326
Query: 374 DGNVKVNR 381
G V V R
Sbjct: 327 KGRVLVAR 334
>gi|410085873|ref|ZP_11282587.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
SC01]
gi|409767421|gb|EKN51497.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
SC01]
Length = 434
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 34/308 (11%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDG 136
Q T +P+ E + +T + + + Q T +L+V +A SL VL+DG
Sbjct: 46 QQAQKTGFPAFHQEDWHYTSLTPLLEADYQDKT---GTLNVLPEAVLTSLNAYRIVLVDG 102
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC---GDLFWSINGMGAPDLG 193
A S+ GV+ S V+D SEF G++F + A
Sbjct: 103 VF---APQWSDADFGVFELS-----------VADRHSEFPAPVNGEIFLHLTESLAQTPL 148
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I V AG + E P+Y+ +S + L + + R + + V +IE F+ +
Sbjct: 149 MIRVKAGAQAEKPLYIVNISTAHNDF----LNMRHSRYHLDIGANAAVSVIEHFISPDEQ 204
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
++ + + +G+ RH L ++ A H + + E GGKL+R
Sbjct: 205 SAHFTGARMTANVGENSDFRHLKLGFENPQAYHFAHNDLVIAAHARVESTSFLLGGKLTR 264
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQA 371
H+ Q G ++S L + D +R L+H +GYC RQ HK IV + +A
Sbjct: 265 HHTSTQLNGEGIVLAMNSLVLPKHGEIAD--TRTYLEHNKGYCESRQRHKTIVMDN-SRA 321
Query: 372 VFDGNVKV 379
VF+G +KV
Sbjct: 322 VFNGMIKV 329
>gi|406899477|gb|EKD42738.1| hypothetical protein ACD_73C00038G0004 [uncultured bacterium]
Length = 436
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 18/266 (6%)
Query: 119 SLDVSTDAQFPSLVLIDGFIQNS--ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ 176
SL + + SLV+I+G + +S AL+L+ + + + + + ++K+ SE
Sbjct: 78 SLSLGNPEEAYSLVVINGRLISSLQALHLNEKIEILPLAEAVLSRETLVKKYLTLTSE-- 135
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D F+ +N A D I+V +G ++ P+ + + + G N + + R VV VE
Sbjct: 136 NNDPFFDLNTALATDGLFIHVKSGFWLDKPLEIIFYTA-GENQNRGQ------RHVVYVE 188
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
E + ++E + G ++CYW N+ E+V+ K + +Q +S A H V Q+
Sbjct: 189 ENAGLKLVETYGG--SDECYWMNTATEIVLEKNAHLELVQIQKESAKAFHTGSVLVTQKE 246
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
+S + G LSR N+ V+ P + F+ L + + D H R +DH C
Sbjct: 247 SSVFTHFLAEFGAVLSRQNIRVELTEPQAVCNIKGFYCLDAKRQADHHVR--VDHLSPQC 304
Query: 357 RQ--LHKCIVAHSLGQAVFDGNVKVN 380
+ L K ++ + + +F G V V+
Sbjct: 305 KSSTLFKGVMDDA-SRGIFRGLVMVH 329
>gi|254431578|ref|ZP_05045281.1| ABC transporter, membrane component [Cyanobium sp. PCC 7001]
gi|197626031|gb|EDY38590.1| ABC transporter, membrane component [Cyanobium sp. PCC 7001]
Length = 376
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 125/301 (41%), Gaps = 45/301 (14%)
Query: 84 LLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSAL 143
L P PSR+ E +RFTD ++S Q P L G +
Sbjct: 21 LAGAPLPSRRQEDWRFTDLRTLRSLQ-------------------PRL----GDAAAAPW 57
Query: 144 NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI--NGMGAPDLGVIYVPAGC 201
LP GV +LL D ++ ++ ++ C D W + N P + + V
Sbjct: 58 TAPELPQGV---ALLPPED-VVNQLDGCLAATGCLD-HWPVRLNRGARPSVLALRVSGDA 112
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSV 261
P+ L + + G + +++L ++++E G + +++ G+ + V
Sbjct: 113 A---PLELPWNAGSGAGLQARRL-------LLVLEAGASLDLLQVI---RGSGPQALSLV 159
Query: 262 LEVVIGKGGKVRHSYLQ-NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
+EV +G G ++ L A+ + AVRQ + S LV + G L R + Q
Sbjct: 160 VEVEMGSGSRLTLGTLAPGGDGQASLLTHVAVRQASGSSLSLVTATAGWALLRQEPRIVQ 219
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
+ T L L+ DQ D HS++ D P G QLHK VA G ++F+G V+V
Sbjct: 220 ADGEASTTLRGLQLVKGDQIADTHSQVRFDGPAGRLDQLHKA-VADERGHSIFNGAVQVP 278
Query: 381 R 381
R
Sbjct: 279 R 279
>gi|238897308|ref|YP_002922985.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465063|gb|ACQ66837.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 432
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 139/317 (43%), Gaps = 40/317 (12%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMI--------KSSQIQPITRPSSSLDVSTDAQF 128
+++ Q LL +P K E +R+T + + K S + P L + Q
Sbjct: 38 KEAHWQALLKLGFPHAKHEDWRYTSLNRLLDHTFTLEKKSTVTP--EKCGDLALFMVGQS 95
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
LV IDG S + +P LL + V + F +
Sbjct: 96 HKLVFIDGHFIASLSEIDEIP-----YELLKRKQAVPAPVKP--------EFFLHLTESL 142
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
+ + VI + AG K + P+YL ++S ++ L +++ R +L+E G E ++E FV
Sbjct: 143 SVENLVIRLAAGQKSKKPLYLLHIS---SGQETSPLKMAHYRHHLLLEPGSEAEVVEHFV 199
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWT-AVRQETASGYELVE 304
++ + L IG+ ++ H ++ NQS + AH + A R S + L+
Sbjct: 200 SL-NTQRHFTGARLTASIGEEARLHHYKLAFENNQSDHFAHNDFVLASRASVHSAHFLL- 257
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKC 362
G L+RH+ VQ G ++S LL+ + + SR ++H + C RQLHK
Sbjct: 258 ---GAALTRHHTSVQLNGEGASASINS--LLLPKEMELFDSRTHVEHNQIGCQSRQLHKT 312
Query: 363 IVAHSLGQAVFDGNVKV 379
+V+ G AVF+G +KV
Sbjct: 313 MVSKQ-GTAVFNGMIKV 328
>gi|108760528|ref|YP_629415.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
gi|108464408|gb|ABF89593.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
Length = 446
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 137/331 (41%), Gaps = 35/331 (10%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF- 128
P L++LR + P+ +DE ++++ I P T DVS D
Sbjct: 25 PQWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAIAEGTFIPRT------DVSRDTAHL 78
Query: 129 -----------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC 177
P LV +DG + +++ LP G+ + L + + + +
Sbjct: 79 SAVVERLGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGELLESVLGQRAL 138
Query: 178 GD--LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
+ F ++N + ++ + G E P+ + +L+ V +S+PR++V+
Sbjct: 139 ANEHAFTALNAALLEEGVLLRLAPGALSEVPVQVVFLTRGDAPV------LSSPRILVVA 192
Query: 236 EEGGEVGIIEEFVGKEGNDCY--WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
E E ++E + + N+V EV +G + H LQ ++ A H+ R
Sbjct: 193 GESSEATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVEADAALHVGALHAR 252
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-- 351
Q S + + GG ++R+ VH G + L+ L V Q L +R LDH
Sbjct: 253 QGRDSRFASHAFAFGGAMARNEVHAAFAGEGGDATLNG--LYVGQGAQHLDNRTALDHAV 310
Query: 352 PRGYCRQLHKCIV-AHSLGQAVFDGNVKVNR 381
PR R+L+K ++ HS G F G ++V +
Sbjct: 311 PRCTSRELYKGVLDGHSRG--TFHGLIRVRQ 339
>gi|120556063|ref|YP_960414.1| FeS assembly protein SufD [Marinobacter aquaeolei VT8]
gi|120325912|gb|ABM20227.1| Iron-regulated ABC transporter permease protein SufD [Marinobacter
aquaeolei VT8]
Length = 428
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 21/328 (6%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SLP+PL LR + L+ P P+RK E ++++ + +K + I+ P+
Sbjct: 12 LHPAGESLPEPL--LALRKERASALVDMPLPTRKTENWKYS-SKYLKLADDMAISLPAEG 68
Query: 120 LDVSTDAQFP--SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC 177
P +V I+G + A +L DG+ + S +++ + +S +
Sbjct: 69 -KTGNSLAVPGYKVVFINGVMIPEASEYPDL-DGIEILSFNDLANDEAEALSAKLGSTLN 126
Query: 178 GDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
D F +NG D I + G ++ P+++ + + + PR+ V
Sbjct: 127 HDQAQFARLNGARFEDGLFIRLKPGAVLDQPLFIIH------ETSADASGSAYPRIYVEA 180
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
++ ++EE+ G ++V E + G V L + N HI T V Q+
Sbjct: 181 GANSQLTLVEEYTSS-GEASALVSTVTEFNLADGANVTSIRLNMEGENVQHIGATGVLQQ 239
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
+S +E V GG L RH++ V+ G ET+L+ + Q D H+ +DH +
Sbjct: 240 RSSRFESHCVGFGGPLRRHDLQVRLEGEGAETKLNGVVVTQGKQHYDNHTS--IDHVAAH 297
Query: 356 C--RQLHKCIVAHSLGQAVFDGNVKVNR 381
C + ++ I A AVF+G + +++
Sbjct: 298 CNSEETYRNIAADQ-SHAVFNGRIHIHQ 324
>gi|238782566|ref|ZP_04626597.1| hypothetical protein yberc0001_22160 [Yersinia bercovieri ATCC
43970]
gi|238716493|gb|EEQ08474.1| hypothetical protein yberc0001_22160 [Yersinia bercovieri ATCC
43970]
Length = 428
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 136/309 (44%), Gaps = 34/309 (11%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVSTDAQFPSLVLID 135
Q +L +PS K E +++T + + + P+ +L + DA LV ID
Sbjct: 39 QQVLELGFPSIKHEDWKYTPLERLLAHDFSFASAPAVTAAQRDALSLVQDAH--RLVFID 96
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G A LS+ G Y + L S + + ++F + A + I
Sbjct: 97 G---RYAPELSDSDCGPYQLTHLTQSVPLPAAIRP--------EIFLHLTESLAQESLHI 145
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+PAG + + P+YL ++S G S+ + S+ R + VE + +IE FV
Sbjct: 146 RLPAGQQSDRPLYLLHISSGSG---SEVVNTSHYRHHLSVETTAQAEVIEHFVSLNPQP- 201
Query: 256 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + L + +G ++ H ++ QS + AH R A Y + G L+
Sbjct: 202 HFTGARLTISLGDNAELSHYKLAFETPQSYHFAHNDLVLSRDARARSYSFL---LGAGLT 258
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 259 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTIVRER-GK 315
Query: 371 AVFDGNVKV 379
AVF+G +KV
Sbjct: 316 AVFNGMIKV 324
>gi|83593903|ref|YP_427655.1| FeS assembly protein SufD [Rhodospirillum rubrum ATCC 11170]
gi|386350652|ref|YP_006048900.1| FeS assembly protein SufD [Rhodospirillum rubrum F11]
gi|83576817|gb|ABC23368.1| FeS assembly protein SufD [Rhodospirillum rubrum ATCC 11170]
gi|346719088|gb|AEO49103.1| FeS assembly protein SufD [Rhodospirillum rubrum F11]
Length = 447
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 152/354 (42%), Gaps = 25/354 (7%)
Query: 38 TFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPF 97
T PQ + PF+ LA + S +P L LR + P+ + E +
Sbjct: 2 TLPQ---TQPFLDTLAPA---SYADGGDGDGKPGWLDDLRQAGLDIYRRQGLPTPRVEAW 55
Query: 98 RFTDTSMIKSSQIQPITRPSS------SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDG 151
++T+ + +P P + LD LV ++G + + + +LP G
Sbjct: 56 KYTNLGGLTKIAFKPEPAPVTLDPGRLPLDRVLALDAHKLVFVNGRLDRTLSDAGDLPAG 115
Query: 152 VYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAGCKVENPIYL 209
+ V L + R+ + + D ++N D VI V +E P+++
Sbjct: 116 LRVSGLAALLAEDPARIEPLLGKGAALDDLPLAALNTGMIADGMVIEVAEDAVIERPLHV 175
Query: 210 KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKG 269
+S +D + PR++V+V + + E VG + + +N V E+ +G+G
Sbjct: 176 IAVSA---ALDGPM--VFYPRLLVVVGARARLVLAESHVGLPDHPAF-SNGVSEISLGEG 229
Query: 270 GKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETEL 329
++ H L + + + + T V +GYE + GG+L+R+ + V G + + +
Sbjct: 230 AQLSHYRLIDGAADGYLVGTTLVEVGVRAGYESFTLELGGRLTRNEIRVTLAGEEGQARV 289
Query: 330 SSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
S + + + Q D + +L+DH P RQL K ++ + G+AVF G + V R
Sbjct: 290 SGGYAVRAGQHLD--NTVLIDHAQPGATSRQLFKGVLDET-GKAVFQGKILVRR 340
>gi|260910874|ref|ZP_05917518.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635025|gb|EEX53071.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 447
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 151/341 (44%), Gaps = 43/341 (12%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS- 108
I L E+ D + + S+++ + LR+++ + +P+RK E +++TD S +
Sbjct: 8 IDLFEANRDVISAHSTAV-----MNVLREAAFEDFKRLGFPTRKTEKYKYTDISKLFEPD 62
Query: 109 ---QIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA-----LNLSNLPDGVYVGSLLGV 160
+Q + P + +V + P L + F+ N A + LPDGV + SL
Sbjct: 63 FGLNLQRLPIPINPYEVFS-CDVPRLSTANHFVVNDAFLHPTMPHKQLPDGVVITSLCEY 121
Query: 161 SDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
++ + DFI+++ D ++N M A D ++YVP G K+E I + +++
Sbjct: 122 AE----KNPDFIAKYYGKLASTAEDGVTALNTMLAQDGLLVYVPRGVKIEQTI--QVINI 175
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW-ANSVLEVVIGKGGKVR 273
VD + N RV+++VE E + F +D ++ A V+E +G ++
Sbjct: 176 LHAEVD----LMVNRRVLIIVEPQAEAKFL--FCDHTFDDRHFLATQVIEAFVGDNARLD 229
Query: 274 HSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFH 333
++ + + Q+ +S ++ ++R+NV + G E LS
Sbjct: 230 LYCMEETHEKNVRVSSVYIEQQASSRVNHNVITLHNGVTRNNVSLTFRGEGAECNLSG-- 287
Query: 334 LLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
+++D+ Q + + ++DH C +H L + V D
Sbjct: 288 CVIADKKQHVDNNTVIDHAVPNCN-------SHELYKYVLD 321
>gi|386361340|ref|YP_006059585.1| FeS assembly protein SufD [Thermus thermophilus JL-18]
gi|383510367|gb|AFH39799.1| FeS assembly protein SufD [Thermus thermophilus JL-18]
Length = 431
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 139/346 (40%), Gaps = 54/346 (15%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P L + R + + P+PS+KDE +R+TD S + +
Sbjct: 13 SKALGEPAWLLEKRLKALEAFARLPYPSKKDENWRYTDLSEAPLELPVEAPKGLKLSRDE 72
Query: 109 QIQPITRPSSSLDVSTDAQF--PSLVLID--------GFIQNS-ALNLSNLPDGVYVGSL 157
+P+ R DVS F P LV + G + S A L PD V
Sbjct: 73 LPEPVRRRLEKTDVSGFLVFVGPDLVYAEVPEELRQKGLVFTSLAEALKTHPDKVEAALF 132
Query: 158 LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
V D F + N +YVPAG +VE P+ + + +EGG
Sbjct: 133 QAV---------------YTEDKFAAQNSAFFTHGAFLYVPAGLEVEKPLGVFKVLLEGG 177
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
S R ++ +E+ + IEE++ + + S E+V+ G ++RH+++
Sbjct: 178 KA-------SAGRSLLFLEDNAKAAYIEEYLSLDLSPTLHL-SATEMVLRPGARLRHAHV 229
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
Q H E SG + V+ GG +R V + +GP E+E+ +
Sbjct: 230 QTFGEGVWHFHRQRALLERDSGLNDLVVNLGGAYARSEVASELVGPGAESEMLGLYFGHG 289
Query: 338 DQTQDLHSRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNVKVNR 381
Q D ++ L H + R L+K V +AVF G +++ +
Sbjct: 290 RQQFDHYT--LQHHVEHHTRSDLLYKGAVKDE-ARAVFSGLIRLEK 332
>gi|238796354|ref|ZP_04639863.1| hypothetical protein ymoll0001_21820 [Yersinia mollaretii ATCC
43969]
gi|238719799|gb|EEQ11606.1| hypothetical protein ymoll0001_21820 [Yersinia mollaretii ATCC
43969]
Length = 413
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 34/309 (11%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVSTDAQFPSLVLID 135
Q +L+ +P K E +++T + S + P+ +L ++ DA LV ID
Sbjct: 24 QQVLALGFPGIKHEEWKYTPLERLLSHHFSFASGPTVTAAQRDALSLTHDAH--RLVFID 81
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G A LS+ G Y L +++ + F + Q ++F + A + I
Sbjct: 82 G---RYAPELSDNDCGPY--QLTHLTEN-----AQFPAAIQP-EVFLHLTESLAQESLHI 130
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+P G + P+YL ++S G S+ L S+ R + VE + +IE FV
Sbjct: 131 RLPGGKLSDKPLYLLHISSGQG---SEVLNTSHYRHHLAVEANAQAEVIEHFVSL-NQQP 186
Query: 256 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + L + +G ++ H ++ +S + AH R A Y + G L+
Sbjct: 187 HFTGARLTITLGDNAELSHYKLAFETPESYHFAHNDLVLSRDARARSYSFL---LGAGLT 243
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RHN Q G ++S L + + D +R L+H +GYC RQLHK IV G+
Sbjct: 244 RHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTIVRER-GK 300
Query: 371 AVFDGNVKV 379
AVF+G +KV
Sbjct: 301 AVFNGMIKV 309
>gi|410663514|ref|YP_006915885.1| FeS assembly protein SufD [Simiduia agarivorans SA1 = DSM 21679]
gi|409025871|gb|AFU98155.1| FeS assembly protein SufD [Simiduia agarivorans SA1 = DSM 21679]
Length = 408
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 125/310 (40%), Gaps = 23/310 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
LQ R + + L WP RK E +R+T ++ S T P+ + + +V
Sbjct: 18 LQVQRARAREALSVARWPGRKVEDWRYTPVRALEKSAFVQATLPAEPAPAIGNLETLDIV 77
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDL 192
L DG + LP+GV + L SD K VS F S LF +N + A
Sbjct: 78 LRDGM----PILPEGLPEGVSIAFL---SDA--KAVSLFGSVKPERHLFGLVNDLLATTG 128
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK-E 251
I V AG +VE P+ + Y + EG V RV+V + G +IE E
Sbjct: 129 VYIEVAAGVEVERPLRVVYQAGEGEQVQQ--------RVLVKLAAGARATVIEHSESAVE 180
Query: 252 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
C +A +LE + + H A HI S V G L
Sbjct: 181 SFTCAYAEYLLE----ESAHLEHYRFVLNGGAALHIGGCHFSLAGKSELNSTLVGFGSDL 236
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 371
SR +V V G +++ +LL + DLH+ + P G + + IVA +A
Sbjct: 237 SRLDVDVIHAGQFATAAMNAIYLLDGSELFDLHTTIEHASPNGTTEENVRGIVADK-ARA 295
Query: 372 VFDGNVKVNR 381
VF+G + ++R
Sbjct: 296 VFNGRIHIHR 305
>gi|386308264|ref|YP_006004320.1| iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
subsp. palearctica Y11]
gi|418243364|ref|ZP_12869846.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433549697|ref|ZP_20505741.1| Iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
IP 10393]
gi|318605862|emb|CBY27360.1| iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
subsp. palearctica Y11]
gi|351777159|gb|EHB19397.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431788832|emb|CCO68781.1| Iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
IP 10393]
Length = 437
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +PAG + P+YL ++S G S+ + S+ R + +E + +IE FV
Sbjct: 154 IRLPAGKHSDKPLYLLHISSGKG---SEVVNTSHYRHHLAIEASAQAEVIEHFVSL-NEQ 209
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G+ ++ H L QS + AH R A Y + G L
Sbjct: 210 PHFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGL 266
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G
Sbjct: 267 TRHNTSAQLNGEGATLSINSLLLPIGSEICD--TRTYLEHNKGYCESRQLHKTMV-RERG 323
Query: 370 QAVFDGNVKV 379
+AVF+G +KV
Sbjct: 324 KAVFNGMIKV 333
>gi|268592598|ref|ZP_06126819.1| FeS assembly protein SufD [Providencia rettgeri DSM 1131]
gi|291312012|gb|EFE52465.1| FeS assembly protein SufD [Providencia rettgeri DSM 1131]
Length = 435
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 29/295 (9%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS 146
TP + + +RF+D+ +++ + + P + LVLIDG ++ LS
Sbjct: 66 TPLNTVLEAQYRFSDSD-VEAKDCEALALPIDAY---------RLVLIDGRYSSA---LS 112
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENP 206
++ G + SLL D + V+ ++F + A V+++ A E P
Sbjct: 113 SIDMGPFQVSLLDNQDLLPSPVN--------SEIFLHLTESLAVQPLVVHLAANKIAEKP 164
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
+YL L++ G+ D + IS R + ++ + +IE +V + + S L V +
Sbjct: 165 LYL--LNISTGSSDKQATNISQYRYHLTLDANSKAQVIEHYVSL-NDQMHMTGSRLTVEV 221
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTE 326
G H L ++ A H + S + G L+R++ + G +TE
Sbjct: 222 GDNADFSHFKLNIENGQAQHFAHNDIVIGRDSRVKSTSFLLGALLTRNHTSARLDGENTE 281
Query: 327 TELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
EL+S L ++ D +R L+H +GYC RQLHK I S +AVF+G +KV
Sbjct: 282 FELNSLLLPKGNEIAD--TRTYLEHNKGYCNSRQLHKVIAMDS-SKAVFNGMIKV 333
>gi|300716482|ref|YP_003741285.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
billingiae Eb661]
gi|299062318|emb|CAX59435.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
billingiae Eb661]
Length = 408
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 136/309 (44%), Gaps = 29/309 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD----VSTDAQFPSLVLIDGF 137
Q +L P+RK E +++T + Q T + + ++ D +V +DG
Sbjct: 18 QQVLRLGLPTRKQENWKYTPLEGLFDHQFAAPTAADVTAEQVKALALDIDAIKMVFVDGR 77
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
N+AL+ D + + V+D +R +S ++F + A ++ I++
Sbjct: 78 F-NAALS-----DSEFDLFNVQVTDSAQRRE---LSAPVQAEVFLHLTESLAEEVTSIHL 128
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
G +Y+ ++S ++ S+ R + ++EG E IIE +V ++
Sbjct: 129 ARGKSAARALYMLHISSSA----QAEMSTSHYRHHLQLDEGAEATIIEHYVSL-NEASHF 183
Query: 258 ANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
+ + K +++H ++ N S + +H R + + G L+RH
Sbjct: 184 TGARFTANVAKNAQLKHYKLAFEHNSSYHFSHNDLVIERDANVKSHSFL---LGAGLTRH 240
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
N VQ G T+ ++S L V + D SR L+H +G+C RQLHK IV +AV
Sbjct: 241 NTSVQLNGEGTDLGINSLMLPVDKEVCD--SRTYLEHNKGHCQSRQLHKTIV-RDKARAV 297
Query: 373 FDGNVKVNR 381
F+G +KV +
Sbjct: 298 FNGMIKVAK 306
>gi|289664560|ref|ZP_06486141.1| FeS assembly protein SufD [Xanthomonas campestris pv. vasculorum
NCPPB 702]
Length = 420
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 143/312 (45%), Gaps = 22/312 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPALVDAAALDDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGV----YVGSLLGVSDG--IMKRVSDFISEFQCGDLFWSINGMG 188
+G + +LS LPDG+ + SL D ++ R D E +F +N
Sbjct: 78 NGRPSEALSDLSPLPDGMQLDTFSASLAAGDDAQQLLGRRFDGSDE-----IFARLNAAL 132
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A + ++ V G ++E P++L ++SV G + S + R ++ V G + ++E +
Sbjct: 133 ADEGVLVRVRDGAQIELPLHLVFVSVTGEHDLSW-----HHRHLIEVRAGAALQVVEHHL 187
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
G+ + NSV+ V + + + H+ +Q S +A + T + Y+ V++ G
Sbjct: 188 -HVGDAAHLENSVMHVHLAQDAALSHARMQANSAHATSLLRTDAVLARNARYQRVDLELG 246
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHS 367
LSRH ++V+ G + +L++ +L+ + + + +RL ++H R +L V
Sbjct: 247 AGLSRHELNVRLEG--SNAQLTANGVLLGNGRRQVDTRLGIEHIARDTACELVWRGVGAD 304
Query: 368 LGQAVFDGNVKV 379
+ VF G +++
Sbjct: 305 RSRVVFHGGIRI 316
>gi|325953986|ref|YP_004237646.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
gi|323436604|gb|ADX67068.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
Length = 439
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 137/321 (42%), Gaps = 23/321 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS-------TD 125
+++LR + + +P RKDE +++T+ + I + L+ D
Sbjct: 25 IEELRQHAIEVFKEKGFPKRKDEEWKYTNIAPILKVDYKLFPETEVGLEYKDIKKYLIND 84
Query: 126 AQFPSLVLIDG----FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL- 180
+V I+G F+ N+ + D + S L S + ++ + D
Sbjct: 85 IDTYLIVFINGKYSSFLSNTT---HDEADICVLSSALNNSVH-HSVIENYFGKIAAKDES 140
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++N A D IYVP + PI + Y S + + PR ++++ + +
Sbjct: 141 FTALNTAFARDGAFIYVPNNTILSKPIQVVYFST-----GVLQEVMYQPRNLIVIGDNAQ 195
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
IIE +G N+V EV +GK +V+ QN S N + I + QE S
Sbjct: 196 AQIIECHQTLDGV-ANLTNAVTEVNVGKNAEVQIHKFQNDSDNVSLIDNVYINQERDSRA 254
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ + GGK+ R+N++ Q G + + L ++ Q D H+ ++ ++P +L+
Sbjct: 255 SVFTFAFGGKIVRNNLNFYQNGENCNSILDGVTIIDKKQHVDHHTLVVHNYPNCESHELY 314
Query: 361 KCIVAHSLGQAVFDGNVKVNR 381
K I A VF+G + V++
Sbjct: 315 KGIYADE-AHGVFNGKIYVHK 334
>gi|285005770|ref|YP_001006409.2| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 443
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +PAG + P+YL ++S G S+ + S+ R + +E + +IE FV
Sbjct: 160 IRLPAGKHSDKPLYLLHISSGKG---SEVVNTSHYRHHLAIEASAQAEVIEHFVSL-NEQ 215
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G+ ++ H L QS + AH R A Y + G L
Sbjct: 216 PHFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGL 272
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G
Sbjct: 273 TRHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTMV-RERG 329
Query: 370 QAVFDGNVKV 379
+AVF+G +KV
Sbjct: 330 KAVFNGMIKV 339
>gi|407684525|ref|YP_006799699.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'English Channel 673']
gi|407246136|gb|AFT75322.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'English Channel 673']
Length = 418
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 45/326 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSL 131
L +R + + L + WP+R++E +RFT T + K Q + S + + L
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKRDAKQAVQADSLPVPAIDNLNAIDL 77
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAP 190
V +DG + + +N ++P G+ + SL + +S + + +F +N
Sbjct: 78 VFVDGVLV-TQVNTLDVPAGMSITSLNSDDAATQQAISSVYGQVKPTRHMFGLVNDALCQ 136
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
I V AG K++ P+ + +++ NVD+ + RVVV V EG +IE+ G
Sbjct: 137 HGIFINVEAGAKIDTPV--RIVNMASQNVDA------HTRVVVKVGEGASATVIEQGFGD 188
Query: 251 E------------GNDCYWANSVLEVVIGKGGKV--RHSYLQNQS-LNAAHIKWTAVRQE 295
+D + + + GK ++ H L N++ LN+
Sbjct: 189 TESLTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNS----------- 237
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
T GY G +LSR +V + G + ++++ +LL + DLHS + P G
Sbjct: 238 TMVGY-------GSELSRLDVDIHHAGEFADAKMNAIYLLAEGELFDLHSTIEHAMPNGT 290
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ + IV +AVF+G + ++R
Sbjct: 291 TEENARGIVGDK-ARAVFNGRIHIHR 315
>gi|270261597|ref|ZP_06189870.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
gi|421783260|ref|ZP_16219711.1| feS assembly protein SufD [Serratia plymuthica A30]
gi|270045081|gb|EFA18172.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
gi|407754700|gb|EKF64832.1| feS assembly protein SufD [Serratia plymuthica A30]
Length = 428
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 27/309 (8%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRP-----SSSLDVSTDAQFPSLVLID 135
Q L WP+RK E +++T + Q ++P P +L ++ DA LV +D
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLEQQFLEPQAEPIAAAQRDALALNLDAY--RLVFVD 93
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G N+AL+ S+L + + + G + + + ++F + A + +I
Sbjct: 94 GRF-NAALSDSDLGEYQFEVTPYGTPQALPEPIQP--------EIFLHLTESLAQETSMI 144
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND- 254
V AG P+YL L + G ++ + R + V +IE +V ND
Sbjct: 145 RVAAGKIAARPLYL--LHISSGRGAEGEVNTVHHRHHLDVGRNARAEVIEHYVSL--NDA 200
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++ + L IG ++RH L +S + H + + + G L+RH
Sbjct: 201 AHFTGARLTASIGDNAELRHCKLAFESQASYHFAHNDLVIGRDARVKSDSFLLGAGLTRH 260
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
N Q G + ++S L V D +R L+H +GYC RQLHK +V+ +AV
Sbjct: 261 NTSAQLNGEGSNLVINSLVLPVGKDVCD--TRTYLEHNKGYCESRQLHKTVVS-DRAKAV 317
Query: 373 FDGNVKVNR 381
F+G +KV +
Sbjct: 318 FNGMIKVAK 326
>gi|332161646|ref|YP_004298223.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325665876|gb|ADZ42520.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 437
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +PAG + P+YL ++S G S+ + S+ R + +E + +IE FV
Sbjct: 154 IRLPAGKHSDKPLYLLHISSGKG---SEVVNTSHYRHHLAIEASAQAEVIEHFVSL-NEQ 209
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G+ ++ H L QS + AH R A Y + G L
Sbjct: 210 PHFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGL 266
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G
Sbjct: 267 TRHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTMV-RERG 323
Query: 370 QAVFDGNVKV 379
+AVF+G +KV
Sbjct: 324 KAVFNGMIKV 333
>gi|122089391|emb|CAL12239.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 388
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +PAG + P+YL ++S G S+ + S+ R + +E + +IE FV
Sbjct: 105 IRLPAGKHSDKPLYLLHISSGKG---SEVVNTSHYRHHLAIEASAQAEVIEHFVSL-NEQ 160
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G+ ++ H L QS + AH R A Y + G L
Sbjct: 161 PHFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGL 217
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G
Sbjct: 218 TRHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTMV-RERG 274
Query: 370 QAVFDGNVKV 379
+AVF+G +KV
Sbjct: 275 KAVFNGMIKV 284
>gi|262196468|ref|YP_003267677.1| FeS assembly protein SufD [Haliangium ochraceum DSM 14365]
gi|262079815|gb|ACY15784.1| FeS assembly protein SufD [Haliangium ochraceum DSM 14365]
Length = 467
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 144/336 (42%), Gaps = 35/336 (10%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT------DTSMIKSSQIQ---------PIT 114
P L +LR ++++ +L+ P+ K E +RFT D + +
Sbjct: 30 PAWLGELR-AAARDVLAAGLPTNKHEGWRFTPLRGLNDRAYADAGARDLDASEGVDGDAL 88
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
R ++ ++ P+L+L+DG L LP GV + +L + S ++E
Sbjct: 89 RAWANAEIGLPDDAPALLLVDG---RPLLPGGALPAGVELSTLAQLCASEAAEGSAELAE 145
Query: 175 FQCGDL--------FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+L F ++N D ++ + + P+++ +++ N
Sbjct: 146 LAAKNLGRVAKLETFSALNAALFADALIVRLSEDA-ADRPLHIAHIA----NRSGSDAGA 200
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS-LNAA 285
+ PRV+V V EG ++E +G+ A +V E+ + ++ H + + S +
Sbjct: 201 AYPRVLVAVAEGARACVVESVLGR-AEAPQLACAVTEITLAPSAELEHVRVHHHSGIALQ 259
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
+ AVRQ+ S Y V+ GGKLSR ++ V P+ EL + + D ++
Sbjct: 260 QVARVAVRQDQGSSYRSRVVTLGGKLSRLDLDVAMTAPEARCELDGVYHAGRGEHLDHYT 319
Query: 346 RLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ PR ++ ++ I+A + G AVFDG + V +
Sbjct: 320 TIDHQAPRCSSQERYRGIIAET-GHAVFDGTIMVQQ 354
>gi|56459263|ref|YP_154544.1| cysteine desulfurase [Idiomarina loihiensis L2TR]
gi|56178273|gb|AAV80995.1| Cysteine desulfurase activator SufB [Idiomarina loihiensis L2TR]
Length = 416
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 43/323 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ----------PITRPSSSLDV 122
L +R + TL WP+R+ E +R+T + +++ P+ +SLD
Sbjct: 19 LSPVRAQALDTLKQQQWPTRRTEAWRYTSLHPVADLELKSSTGNATAEAPVIEGLNSLD- 77
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISEFQCGD 179
LV +DG + L LP+G+ + L S+ I +V
Sbjct: 78 --------LVFVDGQLSTDISKLK-LPEGITISELSAPSEPAEAIFAQVKP------SRH 122
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
LF +N + A VI + AG KVE PI + + G S+ R +V V E
Sbjct: 123 LFGLVNDVLAQQGVVIDIAAGAKVEQPIRIVNFASAGIE--------SHQRTLVRVGENA 174
Query: 240 EVGIIEEFVGKEGNDCYWANSVL-EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+ IIE G GN N+V E I + ++ H A HI + + +
Sbjct: 175 QATIIEHGSGS-GNSL---NTVFAEYDIAEKARLEHYRFALHEGEAIHIGGSHFKLHDHA 230
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
+ G +L+R +V ++ G + ++ +LL Q DLHS + P G +
Sbjct: 231 RLNSTLIGYGSQLTRLDVDIEHAGEHAFAKFNNVYLLAPRQHFDLHSTIEHASPNGTTEE 290
Query: 359 LHKCIVAHSLGQAVFDGNVKVNR 381
+ I+ +AVF+G + ++R
Sbjct: 291 NARGIIG-DRAKAVFNGRIHIHR 312
>gi|333926979|ref|YP_004500558.1| FeS assembly protein SufD [Serratia sp. AS12]
gi|333931933|ref|YP_004505511.1| FeS assembly protein SufD [Serratia plymuthica AS9]
gi|386328802|ref|YP_006024972.1| FeS assembly protein SufD [Serratia sp. AS13]
gi|333473540|gb|AEF45250.1| FeS assembly protein SufD [Serratia plymuthica AS9]
gi|333491039|gb|AEF50201.1| FeS assembly protein SufD [Serratia sp. AS12]
gi|333961135|gb|AEG27908.1| FeS assembly protein SufD [Serratia sp. AS13]
Length = 428
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 133/308 (43%), Gaps = 25/308 (8%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRP-----SSSLDVSTDAQFPSLVLID 135
Q L WP+RK E +++T + Q ++P P +L ++ DA LV +D
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLEQQFLEPQAEPIAAAQRDALALNLDAY--RLVFVD 93
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G N+AL+ S+L + + + G + + + ++F + A + +I
Sbjct: 94 GRF-NAALSDSDLGEYQFDVTPYGTPQALPEPIQP--------EIFLHLTESLAQETSMI 144
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
V AG P+YL L + G ++ + R + V +IE +V
Sbjct: 145 RVAAGKIATRPLYL--LHISSGRGSEGEVNTVHHRHHLDVGRNARAEVIEHYVSL-NEAA 201
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
++ + L +G ++RH L +S + H + + + G L+RHN
Sbjct: 202 HFTGTRLTASVGDNAELRHCKLAFESQASYHFAHNDLVIGRDARVKSDSFLLGAGLTRHN 261
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 373
Q G + ++S L V D +R L+H +GYC RQLHK +V+ +AVF
Sbjct: 262 TSAQLNGEGSNLAINSLVLPVGKDVCD--TRTYLEHNKGYCESRQLHKTVVS-DRAKAVF 318
Query: 374 DGNVKVNR 381
+G +KV +
Sbjct: 319 NGMIKVAK 326
>gi|410696126|gb|AFV75194.1| FeS assembly protein SufD [Thermus oshimai JL-2]
Length = 430
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 149/341 (43%), Gaps = 35/341 (10%)
Query: 59 SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS 118
+L + S L +P L + R + + P+PSRKDE +R+TD S + ++
Sbjct: 8 ALETLSQRLNEPKWLLEARLKALEAFHRLPYPSRKDEAWRYTDLS---EAPLEAALEAPQ 64
Query: 119 SLDVSTDAQFPSLVLIDGFIQNSALNLSNL-PDGVY--VGSLLGVSDGIMKRVSDFISE- 174
L +S D + P V ++A L + PD VY V L + +++ +
Sbjct: 65 GLTLSRD-ELPEAVKRRLEKTDAAAFLVFVGPDLVYAEVPEELKEKGLVFTSLAEALKTH 123
Query: 175 --------FQC---GDLFWSINGMGAPDLGVIYVPAGCKVENPI-YLKYLSVEGGNVDSK 222
FQ D F + N +YVPAG +V+ P+ KYL EGG
Sbjct: 124 PEKVEGALFQAVFTEDKFAAQNAAFFTHGAFLYVPAGLEVDRPLGVFKYL--EGGVA--- 178
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
S R ++++E+ + IEE++ ++ ++ E+++ G ++RH++++
Sbjct: 179 ----SVGRTLIVLEDNAKAAYIEEYLSEDLPPTLHLSAT-EMLLRPGSRLRHAHVETFGQ 233
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
H E +G + + GG+ +R V + LGP E+E+ + DQ D
Sbjct: 234 GVWHFHRQRALLERDAGLNDLVANLGGRCARSEVASELLGPGAESEMLGLYFAHGDQQFD 293
Query: 343 LHSRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNVKVNR 381
++ L H + R L+K V +AVF G +++ +
Sbjct: 294 HYT--LQHHVAHHTRSDLLYKGAVKDE-ARAVFSGLIRLEK 331
>gi|325919611|ref|ZP_08181623.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
gardneri ATCC 19865]
gi|325549947|gb|EGD20789.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
gardneri ATCC 19865]
Length = 420
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 135/292 (46%), Gaps = 17/292 (5%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVS 123
SL + +R + L T P + E +++T + +S Q P+ V
Sbjct: 7 SLARGFCGNDVRRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQTAPLVPTLVDASVL 66
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD- 179
D P LV ++G ++ +LS LPDGV + +L L SD + + F+ D
Sbjct: 67 DDIASPRLVFVNGRPSDALSDLSTLPDGVQLETLSASLAASDDAQQLLG---RRFEGSDE 123
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F IN A + ++ V G +++ P+ L ++SV G + S + R ++ + G
Sbjct: 124 IFARINAALADEGVLVRVQEGAQIDIPLQLVFISVAGEHDLSW-----HHRHLIELRAGA 178
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ ++E + G+ + NS++ V + + + H+ +Q S +A + T +
Sbjct: 179 ALNVVEHHL-HVGDAAHLDNSLMHVHLAQDAVLSHARVQADSAHATSLLRTDAVLARNAR 237
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 351
Y+ V++ G LSRH ++V+ G +L++ +L+ + + + +RL + H
Sbjct: 238 YQRVDLELGANLSRHELNVRLEG--NNAQLTANGVLLGNGRRHVDTRLGIQH 287
>gi|146340501|ref|YP_001205549.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 278]
gi|146193307|emb|CAL77323.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 278]
Length = 440
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 143/345 (41%), Gaps = 35/345 (10%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + ++R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGAGKVVEIRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLD---------VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
P ++ +S D LVL+DG + +L+ LP GV V +L V
Sbjct: 69 PLAGAPDAAALARAKAAIAPISIDGA-AKLVLVDGVVAAELSDLAALPAGVGVRTLRAVL 127
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
D + + D S+N A D V+ V G ++ P++L +++ S
Sbjct: 128 DEASNEAIGDLLLTKVSDPMLSLNAALATDGVVVTVADGAQLTEPLHLIHVATA-----S 182
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
K S R V V +G ++E + EG Y AN + +G G ++ H L +
Sbjct: 183 KAARYS--RSHVKVGQGARATLVETSIAAEGVAAYQANDAAVIWVGDGAQLSHIRLMRDA 240
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
+A ++ S L +++GG +SR G +E ++ +LL Q
Sbjct: 241 ADAVNVSSELFTVGAKSKLSLFNMTSGGAVSRLQAFFTLAGEASELIVNGVNLLRDKQHG 300
Query: 342 DLHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNR 381
D+ L++DH C R+ + ++ AHS VF G + V +
Sbjct: 301 DM--TLVVDHAVPGCTSRENFRAVLDDRAHS----VFQGRIIVRQ 339
>gi|270158825|ref|ZP_06187482.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|289166382|ref|YP_003456520.1| component of SufBCD complex [Legionella longbeachae NSW150]
gi|269990850|gb|EEZ97104.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|288859555|emb|CBJ13520.1| component of SufBCD complex [Legionella longbeachae NSW150]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 148/334 (44%), Gaps = 33/334 (9%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT------DTSMIKSSQIQPITR 115
+S SSLP L L+ + + L +P+R DE +++T + S + S ++ + +
Sbjct: 14 TSLSSLPW---LAHLQTKALRDLHRRGFPTRHDEDWKYTSVDGLLNQSFLPVSNLESVAK 70
Query: 116 PSSSLDVSTDAQFPSLVLIDG--FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
PS D+ D +L+ + + L S LP GV V L +S I++ +
Sbjct: 71 PSH-YDLEFDLPITQKILLQNGSYFSDDRLT-SVLPKGVIV---LPLSAAIIQHPE--LL 123
Query: 174 EFQCGDLFWSINGMGAPDLGVI------YVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
E G++ +G + +I Y+P G +E PI L + V ++
Sbjct: 124 EPYLGNILKQEHGFHYLNTAMIHCGVMIYIPKGVVLEEPIALTH-------VQTRMNQAV 176
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
R V++ E +IE++ G + Y N+V E+++G ++ H +Q +S +A H+
Sbjct: 177 YLRHVIIAEANSRATVIEDYQGLP-DGSYLTNTVTEILVGANAQLTHYKIQRESKSAYHV 235
Query: 288 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 347
AV+Q S + +S GG+ R +V + T + ++ + Q D H+ +
Sbjct: 236 GHVAVKQLAGSEFANHSLSLGGQWVRSDVSLDLQEEKTYSLMNGIYAPTEGQHVDHHTTV 295
Query: 348 LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
P Q +K I+ +AVF+G V V +
Sbjct: 296 QHLVPNCRSEQDYKGILT-GRSRAVFNGKVFVAK 328
>gi|260061112|ref|YP_003194192.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
gi|88785244|gb|EAR16413.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
Length = 455
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 19/342 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L + L S + + + P+ +R + + S +P RK E +++T + ++
Sbjct: 18 MDLKDKLLASFMAFENQVDMDHPVHDIRSEAIRNFESKGFPHRKMEAWKYTSLAPLQKVD 77
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ S+LD Q+ +V IDG I +S L+ DGV + + +
Sbjct: 78 FSLFPKEDSTLDYREVKQYFLHEVDTYKIVFIDG-IYSSYLS-ETTHDGVDICLMSAALN 135
Query: 163 GIMKR--VSDFISEFQC-GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
M R + + ++ + ++N + IY+P P+ + +LS GN
Sbjct: 136 KPMYRPIIDVYFNKVASREESLTTLNTAFTREGAYIYIPKNKAPRKPVEILHLST--GNE 193
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
S L PR +++VEE E+ +IE N+ NSV E+ K V + +Q
Sbjct: 194 ASLLL---QPRNLIVVEENAELQVIERHQSLTSNEV-LTNSVTEIFAAKDAIVDYYKVQT 249
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
A+ I T + Q+T S + S GG L+R+N++ Q G + L +L Q
Sbjct: 250 DRPTASLIDNTYIDQKTNSQVSVHTFSFGGNLTRNNLNFYQDGNHMNSILKGVTILGDKQ 309
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + P Q +K I VF+G + V++
Sbjct: 310 HVDHHTLVHHQQPDCESHQDYKGIFGDQ-STGVFNGKIIVDK 350
>gi|319900396|ref|YP_004160124.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
gi|319415427|gb|ADV42538.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
Length = 447
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 23/289 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + ++++ P DV + V+ D F
Sbjct: 42 FPTRKQEKYKYTDVSNFFEPDYGLNLNRLELPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N L S+LP GV GSL V++ + V + + D + N A D ++YV
Sbjct: 101 NKTLPKSHLPQGVIFGSLKEVAEQNPELVRKYYGKLANTAEDGVAAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+VD + N RV++++EEG +V ++ + + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVDF----LVNRRVLIILEEGAQVRLLACDHAMDSVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
A V+E +G+ L+ + I V+QE S L ++ +R+
Sbjct: 214 ATQVIEAFVGENAVFDFYELEETHTSTVRISNLYVKQEAGSNVLLNGMTLHNGTTRNTTR 273
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 364
V G E L + ++D+ Q + + +DH YC +L+K ++
Sbjct: 274 VTLAGRHAELNLCG--MAIADKNQHVDNNTSIDHAASYCTSNELYKYVL 320
>gi|392391462|ref|YP_006428065.1| Iron-regulated ABC transporter permease protein SufD
[Ornithobacterium rhinotracheale DSM 15997]
gi|390522540|gb|AFL98271.1| Iron-regulated ABC transporter permease protein SufD
[Ornithobacterium rhinotracheale DSM 15997]
Length = 423
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 145/330 (43%), Gaps = 35/330 (10%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS 117
+ + S S P P Q + + + +P+ K+E +RFT+ + S + +
Sbjct: 6 EEIKSHFESYPTPSERQT---QAFEEFVQEGFPTTKNEEWRFTNLKPVISQEYN-LKLNE 61
Query: 118 SSLDVSTDAQ--FPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM--KRV 168
+L++S Q P L V ++GF A NLSN+ + + + ++ K +
Sbjct: 62 EALNLSDIEQHFIPELDSYKIVFVNGFF---AENLSNIGSEIEFLPVTAAKENVIYQKYL 118
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ + + S+N A + I++ KVE PI + + + E +
Sbjct: 119 NTVVKH---ENSLESLNTALATNGYYIHIKHNQKVEKPIEIVFFTNEA------QASFVQ 169
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
P+ +++ + + +IE V N+ ++ N+V E+V+G+ ++ QN + + A I
Sbjct: 170 PKNLIVAGDHATLDVIESHVSL-NNEPHFTNAVTEIVVGENTQINFYKTQNDTEHTALID 228
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 348
Q+ S + +S GGK +R+ ++ +QLG + + + + L +Q D H+ L
Sbjct: 229 QVFAEQKQGSVVSIDTLSLGGKFTRNGLNFKQLGENCNSLMQAVSLGEGEQLIDHHT--L 286
Query: 349 LDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 378
++H C +H L + + DG K
Sbjct: 287 VEHTAANCE-------SHELYRTILDGKSK 309
>gi|365961626|ref|YP_004943193.1| FeS assembly protein SufD [Flavobacterium columnare ATCC 49512]
gi|365738307|gb|AEW87400.1| FeS assembly protein SufD [Flavobacterium columnare ATCC 49512]
Length = 438
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 146/343 (42%), Gaps = 21/343 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + + L LR S+ + + +P++K+E +++T + + +
Sbjct: 1 MDLKEKLLSSFMAFEEKVDVTTELHDLRTSALKNFEAKGFPTKKEEAWKYTSLNTVLKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ +++++ ++ +V IDG S S DG+ V + ++
Sbjct: 61 FSIFPKKENAVEIKDVKKYFINNVDTYKVVFIDGVF--STFLSSTTHDGLDVCLMSSALT 118
Query: 162 DGIMKRVSD-FISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K V D + ++ + S+N A + I +P VE PI + Y S N
Sbjct: 119 KPKYKMVIDTYFNQIASKEETLTSLNTAFAYEGAYINIPKSKVVEKPIEIIYFSTGVENA 178
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
L I PR +V+V E V IIE N + NSV EV K V + +QN
Sbjct: 179 ----LMIQ-PRNLVIVGENAHVQIIERHQSLNKNPVF-TNSVTEVFAQKRAIVDYYKIQN 232
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+A I T + Q+ S + S GG ++R+N++ G ++ L ++ Q
Sbjct: 233 DLQSANLIDNTYIAQKQESRVSVHTFSFGGNITRNNLNFYHQGERIDSTLKGITIIGDKQ 292
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIV-AHSLGQAVFDGNVKVNR 381
D ++ + P Q +KCI+ H+ G VF+G + V +
Sbjct: 293 HVDHYTLVQHAQPNCESHQNYKCILDDHATG--VFNGKIYVEK 333
>gi|410862378|ref|YP_006977612.1| cysteine desulfurase activator SufB [Alteromonas macleodii AltDE1]
gi|410819640|gb|AFV86257.1| cysteine desulfurase activator SufB [Alteromonas macleodii AltDE1]
Length = 418
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 143/329 (43%), Gaps = 51/329 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + L + WP+R++E +RFT + I+ + +Q P ++D +
Sbjct: 18 LSPVRQQALAQLKADGWPARRNESWRFTPLTPIEKREAKQAVQADNLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
L+ +DG + + +N ++P G+ + SL + +S + + +F +N
Sbjct: 75 IDLIFVDGVLV-TQVNTLDVPAGMSITSLNSDDAATQQAISSVYGKVKPSRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG K++ P+ + +++ NVD+ + RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGVKIDTPV--RIVNMASQNVDA------HTRVVVKVAEGASATVIEQG 185
Query: 248 VGKE------------GNDCYWANSVLEVVIGKGGKV--RHSYLQNQS-LNAAHIKWTAV 292
G +D + + + GK ++ H L N++ LN+
Sbjct: 186 FGDTESLTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNS-------- 237
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
T GY G +LSR +V + G + ++++ +LL + DLHS + P
Sbjct: 238 ---TMVGY-------GSELSRLDVDIHHAGEFADAKMNAVYLLAEGELFDLHSTIEHAMP 287
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
G + + IV +AVF+G + ++R
Sbjct: 288 NGTTEENARGIVGDK-ARAVFNGRIHIHR 315
>gi|119476386|ref|ZP_01616737.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
gi|119450250|gb|EAW31485.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
Length = 418
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 140/311 (45%), Gaps = 25/311 (8%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP-SSSLDVSTDAQFPSLVLID 135
R S + L + WP+RK E +++T +M+ + + + ++ + L+L+D
Sbjct: 23 RQQSLELLQQSRWPTRKTEAWKYTSVNMLVDATFAETSDGIFDAPELIDNLDSIDLLLVD 82
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-----DLFWSINGMGAP 190
G +++ ++ +LP G+ S+ ++D +++ ++ +E G F +N + A
Sbjct: 83 GVLRS---DIGDLPSGL---SIYSIADTPIEQ-REWAAEVFTGAKPSKHYFGLVNDVLAT 135
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+I V G KV+ PI + G S+ R+++ + E IIE+F G+
Sbjct: 136 AGVLIDVAEGVKVDRPIRVICRQSNGCE--------SHTRILMRLGSNAEAVIIEDFAGE 187
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
+ + E ++G+ + H + + A I S V G
Sbjct: 188 VKS---FNTGFSEYIVGESATLEHYRIAMNTGEAISIGGCHFNLNYRSALNSTVVGLGSS 244
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 370
LSR ++ V +G +L++F+LL +T DLHS + G + + IVA S +
Sbjct: 245 LSRLDIDVNHIGEYATAKLNAFYLLNGSETFDLHSSIEHIAANGTSEENVRGIVADS-SR 303
Query: 371 AVFDGNVKVNR 381
AVF+G + ++R
Sbjct: 304 AVFNGRIHIHR 314
>gi|320449480|ref|YP_004201576.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
gi|320149649|gb|ADW21027.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
Length = 430
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 153/336 (45%), Gaps = 35/336 (10%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS 123
S +L +P + + R + + P+PS+KDE +R+TD S ++ Q + P L +S
Sbjct: 13 SRALKEPGWVLEKRLKALEAFARLPYPSKKDEAWRYTDLS--EAPLEQEVETPKG-LSLS 69
Query: 124 TDAQFPSLVL-------IDGFIQNSALNL--SNLPDGVYVGSLL--GVSDGIM----KRV 168
D + P LV + GF+ +L + +P+ + L+ +++ + K
Sbjct: 70 RD-ELPELVKRRLEKTDVSGFLVFVGPDLVYAEVPEELSAKGLVFTSLAEALKTHPGKVE 128
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ D F + N +YVPAG +VE P+ + + +EGG S
Sbjct: 129 ATLFRGVYVEDKFAAENSAFFTHGAFLYVPAGLEVEKPLGV-FKVLEGGKA-------SA 180
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI- 287
R ++ +E+ + IEE++ + S E+V+ G ++RH+++Q H
Sbjct: 181 GRSLIFLEDNAKAAYIEEYLSLDLPPTLHL-SATEMVLRPGARLRHAHVQTLGDGVWHFH 239
Query: 288 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 347
+ A+ + A+ +LV V+ GG+ +R V + LGP E+E+ + Q D ++
Sbjct: 240 RQRALLERDAALNDLV-VNLGGRYARSEVASELLGPGAESEMLGLYFGHGLQHFDHYT-- 296
Query: 348 LLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNVKVNR 381
L H + R L+K V +AVF G +K+ R
Sbjct: 297 LQHHVEHHTRSDLLYKGAVKDE-ARAVFSGLIKLER 331
>gi|269926802|ref|YP_003323425.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
gi|269790462|gb|ACZ42603.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
Length = 434
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 142/331 (42%), Gaps = 33/331 (9%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSL-D 121
S SL +P + LR + + +TP P+ +DE +R TD + Q P+ SS L +
Sbjct: 22 SESLNEPEWFRDLRLRAWEAFENTPMPTLQDEEWRRTDIRALNFDNFQVPLEASSSYLPE 81
Query: 122 VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS--------DGIMKRVSDFIS 173
S D + +DG + S L+ S GV + L + + V D S
Sbjct: 82 SSEDHRSGFAQFVDGRLVQSWLDDSLAAKGVIMTDLSTAAREYPDLLRQYLFSVVPDAYS 141
Query: 174 EFQCGDLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
+F N G GV +YVP +V+ P+ + + + S L + PR +
Sbjct: 142 KFAA-----LANAFGN---GVFVYVPNNVQVDLPVQISF------TLSSPGLAVF-PRSL 186
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSV--LEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
V+ E G + IIE + ++ D + SV EVV G+G ++R+ +Q N H
Sbjct: 187 VVAERGSSLAIIERYYTEDWKDEPESLSVAGAEVVAGEGSQLRYVSVQELGRNFWHFLVQ 246
Query: 291 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 350
+ + + + GGKLS+ NV +EL + Q D H+ L D
Sbjct: 247 RHKVLKDAQENSLNIGLGGKLSKSNVETIMAEKGGVSELLGIYFGDDSQFFDYHT--LQD 304
Query: 351 HPRGYCRQ--LHKCIVAHSLGQAVFDGNVKV 379
H + C L+K ++ + +AVF G +KV
Sbjct: 305 HAQPNCTSDLLYKGVLKDT-ARAVFSGLIKV 334
>gi|376317242|emb|CCG00611.1| FeS assembly protein SufD [uncultured Flavobacteriia bacterium]
Length = 437
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 145/342 (42%), Gaps = 26/342 (7%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+ L SS + L P+ +R + T +P++K+E +++T + I +
Sbjct: 2 SLKSKLVSSYLAFDDHLDDNSPIHDIRKKAIDTFEEKGFPTKKEEDWKYTSLNAIINKDY 61
Query: 111 QPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--S 161
++ + D +V IDG + S+ DG+ V L V
Sbjct: 62 SISSKGDKEIKYEKVREYFLHDIDSYKVVFIDGVFSSFLSETSH--DGLDVCLLSSVLSK 119
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
+ + + ++ D S+N A + I +P +V+ PI + ++ GN
Sbjct: 120 EKYKAIIEAYYNKIASKDSITSLNTAFAKEGAYINIPNNKEVDKPIEI--INFSTGN--- 174
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ + PR +++V E V IIE N + NSV E+ K + +QN
Sbjct: 175 ETALMMQPRNLIIVGENAHVQIIERHQSLSDN-AVFTNSVTEIFAEKRAYLDFYKIQNDK 233
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
NA+ I T + QE + + S GGK++R+N++ Q G ++ L +L Q
Sbjct: 234 ENASLIDNTFIHQEQDTNCNVHTFSLGGKITRNNLNFSQNGEHCDSTLKGVTILKDKQHV 293
Query: 342 DLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ L++H P Q +K + A S VF+G V V +
Sbjct: 294 DHNT--LVNHISPNCESHQDYKGLYADS-STGVFNGRVIVEK 332
>gi|330997786|ref|ZP_08321621.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
gi|329569674|gb|EGG51439.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
Length = 447
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 25/308 (8%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVS 123
+ L LRD + + +P++K E +++TD S + ++++ P +
Sbjct: 24 VALNALRDKAFEDFTRQGFPTQKVERYKYTDVSAAFAPDYGLNLNRVEFPVNPYEAFRCD 83
Query: 124 TDAQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC--GD 179
SL + D F + AL + LP+GV V SL ++ RVS + D
Sbjct: 84 VPNLSTSLYFMVNDSFYR-KALPAAALPEGVVVCSLKQAAEDYPDRVSACYGKLARTEKD 142
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
++N M D IYVP G VE L+ +++ +VD ++N RV+V++EE
Sbjct: 143 AINALNTMLVQDGLFIYVPRGVVVERT--LQVVNILRSDVD----LMANRRVLVVLEENA 196
Query: 240 EVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+V ++ F +D + V+EV + ++ L+ + VRQ+ S
Sbjct: 197 QVRLL--FCDHAMDDRNFLTTQVVEVFAAENTRLELYELEETHVKNRRFSNMYVRQQRGS 254
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
L ++ +R+ + G E+ L L+++D+ Q + + L+DH G+C
Sbjct: 255 VVNLYNITLHNGQTRNRTDLVLDGEGAESNLCG--LVIADKEQRVDNNTLIDHRAGHCTS 312
Query: 357 RQLHKCIV 364
QL+K ++
Sbjct: 313 NQLYKYVM 320
>gi|330861454|emb|CBX71677.1| hypothetical protein YEW_LR49840 [Yersinia enterocolitica W22703]
Length = 604
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +PAG + P+YL ++S G S+ + S+ R + +E + +IE FV
Sbjct: 58 IRLPAGKHSDKPLYLLHISSGKG---SEVVNTSHYRHHLAIEASAQAEVIEHFVSLN-EQ 113
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G+ ++ H L QS + AH R A Y + G L
Sbjct: 114 PHFTGARLTISVGENAELSHCKLAFETPQSYHFAHNDLVLSRDARAKSYSFL---LGAGL 170
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G ++S L + + D +R L+H +GYC RQLHK +V G
Sbjct: 171 TRHNTSAQLNGEGATLSINSLLLPIGREICD--TRTYLEHNKGYCESRQLHKTMV-RERG 227
Query: 370 QAVFDGNVKV 379
+AVF+G +KV
Sbjct: 228 KAVFNGMIKV 237
>gi|441500737|ref|ZP_20982891.1| Iron-sulfur cluster assembly protein SufD [Fulvivirga imtechensis
AK7]
gi|441435578|gb|ELR68968.1| Iron-sulfur cluster assembly protein SufD [Fulvivirga imtechensis
AK7]
Length = 444
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 145/344 (42%), Gaps = 34/344 (9%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQ 111
E+LE L +S+ LP+ ++R + P+ ++E +++TD ++ K+ +
Sbjct: 18 EALEKRLNGASA-----LPIHQVRKKAINAFQELGLPTARNEEYKYTDLKKALQKTFDFK 72
Query: 112 PITRPSSSLDVST---------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ P ++ T DA L+ I+G N + + D + + L +
Sbjct: 73 APS-PQGKINRETIEECLIPGLDANI--LIFINGVFSNELSTIISPEDQLTIKDLEAATM 129
Query: 163 GIMKRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS-VEGGNV 219
+ + ++ +++ D F ++N I++P VE PI L + + + G
Sbjct: 130 EDKELIDNYFAQYANYEHDAFIALNTAFTEHGSFIHIPDNKLVEKPIALYFFNDAQAGK- 188
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
+ PR + +V + + +E F VGK + + N V E+V+ + + +
Sbjct: 189 -----SYNQPRNLFIVGKSSQATFLEVFYTVGKHES---FTNIVSEIVVNENANAEYYKI 240
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
QN A H+ T V Q S + + G + R+N+++ G E+ + +LL
Sbjct: 241 QNNRDTAFHVGTTQVWQARNSQFSAYTFTLNGAMIRNNLNIASDGEGCESHMYGLYLLHG 300
Query: 338 DQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + P + +L+K I+ VF+G V V +
Sbjct: 301 KTHVDNHTEIDHIKPNSFSNELYKGIMEDQ-SHGVFNGKVYVRQ 343
>gi|154244044|ref|YP_001415002.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154158129|gb|ABS65345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 148/342 (43%), Gaps = 30/342 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ ++ ++LP + R ++ T P R+ E +R+TD + + +P+
Sbjct: 19 ALAETFAAARTALPGGADVAAQRAAAFDTFADVGLPHRRVEAWRYTDLRALMR-EARPLA 77
Query: 115 RPSSSLDVSTDAQ---------FPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSD 162
P + + A F LV+++G +L+ L G+ + S+ L D
Sbjct: 78 APPDAEAKAAAATAGAMLAGLGFRRLVVVNGAFVPELSDLAGLEAGLSIRSMADALTNGD 137
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ ++ ++ D ++N D V++V AG +E P+ L + V ++
Sbjct: 138 ALTGQLGQTVA---SSDAVLALNTALMGDGVVLHVAAGAVIERPVELVF-------VTTQ 187
Query: 223 KLPISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
P+S R +V+VEEG + +IE G G Y N+ LE+V+G G V + +
Sbjct: 188 TTPVSMFTRSLVVVEEGASLTLIESHEGPAGV-AYQVNTALELVVGAGANVERVKITAEG 246
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
+A H+ + + + + +TGG + R+ + G ++ LL Q
Sbjct: 247 SDAVHLATLLAKVDANATFANTFFTTGGLVVRNQLLGHLAGEAIHARMNGVSLLSGKQHA 306
Query: 342 DLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D + L +DH P G R+ + ++ Q +F G + V +
Sbjct: 307 D--TLLSVDHAAPAGESRESFRAVL-DGASQDIFQGKIAVRQ 345
>gi|304414759|ref|ZP_07395741.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Regiella insecticola LSR1]
gi|304283157|gb|EFL91569.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Regiella insecticola LSR1]
Length = 452
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 38/314 (12%)
Query: 82 QTLLSTPWPSRKDEPFRFT--------DTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVL 133
Q ++ +P K E +++T D S +S I+ + L + +A LV
Sbjct: 57 QQVMELGFPHNKHEDWKYTPLDRLLQHDFSYATTSAIRINKQRCDELALPLEAH--RLVF 114
Query: 134 IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLG 193
IDG A +LS+ Y +L + + + ++F + A +
Sbjct: 115 IDG---KWAPSLSDTHCDPYQICVLTEKENLPAAIHP--------EIFLHLTESLAQEKV 163
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNV---DSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+I + AG K P+Y +L ++ G + K++ S R +++E +IE FV
Sbjct: 164 LIRLAAGKKAAKPLY--FLHIDSGQTHDNNEKRISSSYYRHHLVIEPHASAQVIEHFVSH 221
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV---RQETASGYELVEVST 307
+ + + N+ L + +G ++ H L ++ + H V R A +
Sbjct: 222 Q-HHANFTNARLTMAVGDNAQLTHCKLAFETAQSYHFSHNDVILGRHARAHSDSFL---L 277
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 365
G L+RH+ + G D + ++S L +S + D SR L+H G+C RQLHK IV
Sbjct: 278 GAGLTRHHTSSKLNGEDGDVSINSLLLPLSGEIAD--SRSYLEHNTGHCQSRQLHKMIVQ 335
Query: 366 HSLGQAVFDGNVKV 379
H G AVF+G +KV
Sbjct: 336 HG-GTAVFNGLLKV 348
>gi|332141973|ref|YP_004427711.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
gi|327551995|gb|AEA98713.1| Cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
Length = 418
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 136/314 (43%), Gaps = 21/314 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + L + WP+R++E +RFT + I+ + +Q P ++D +
Sbjct: 18 LSPVRQQALAQLKADGWPARRNESWRFTPLTPIEKREAKQAVQADNLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
L+ +DG + + +N ++P G+ + SL + +S + + +F +N
Sbjct: 75 IDLIFVDGVLV-TQVNTLDVPVGMSITSLNSDDAATQQAISSVYGKVKPSRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG K++ P+ + +++ NVD+ + RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGVKIDTPV--RIVNMASQNVDA------HTRVVVKVAEGASATVIEQG 185
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST 307
G + + E + + H + A + + + + V
Sbjct: 186 FGDTES---LTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNRTTLNSTMVGY 242
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS 367
G +LSR +V + G + ++++ +LL + DLHS + P G + + IV
Sbjct: 243 GSELSRLDVDIHHAGEFADAKMNAVYLLAEGELFDLHSTIEHAMPNGTTEENARGIVGDK 302
Query: 368 LGQAVFDGNVKVNR 381
+AVF+G + ++R
Sbjct: 303 -ARAVFNGRIHIHR 315
>gi|418021122|ref|ZP_12660266.1| FeS assembly protein SufD [Candidatus Regiella insecticola R5.15]
gi|347603523|gb|EGY28344.1| FeS assembly protein SufD [Candidatus Regiella insecticola R5.15]
Length = 428
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV---DSKKLPISNPRVVVLV 235
++F + A + +I + AG K P+YL L ++ G + K++ S R +++
Sbjct: 125 EIFLHLTESLAQEKVLIRLAAGKKAAKPLYL--LHIDSGQTHDNNEKRISSSYYRHHLVI 182
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV--- 292
E E +IE FV + + ++ N+ L + +G ++ H L ++ + H V
Sbjct: 183 EPHAEAQVIEHFVSHQ-HHAHFTNARLTMAVGDNAQLTHCKLAFETAQSYHFSHNDVILG 241
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
R A + G L+RH+ + G + ++S L ++ + D SR L+H
Sbjct: 242 RHARAHSDSFL---LGAGLTRHHTSSKLNGEGGDVSINSLLLPLNGEIAD--SRSYLEHH 296
Query: 353 RGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
G+C RQLHK IV H G AVF+G +KV
Sbjct: 297 SGHCQSRQLHKTIVHHG-GTAVFNGLLKV 324
>gi|90021063|ref|YP_526890.1| Iron-regulated ABC transporter permease SufD [Saccharophagus
degradans 2-40]
gi|89950663|gb|ABD80678.1| Iron-regulated ABC transporter permease protein SufD
[Saccharophagus degradans 2-40]
Length = 439
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 157/334 (47%), Gaps = 43/334 (12%)
Query: 72 PLQKLRDSS---SQTLLSTPWPSRKDEPFRFTDT------SMIKSSQI--QPITRPSSSL 120
PL L+D + Q L +P+RK E +++T+ ++++ I P P
Sbjct: 15 PLTWLQDKTQQGKQAWLGHRFPTRKTENWKYTNLRALEQGDYLRAANIGAAPEALPQHLT 74
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF----ISEFQ 176
+A LV ++G +++L D + ++ G+ + SD I+E Q
Sbjct: 75 IAGLEA--VKLVFVNGQF------VASLSDDLARANVAGLELTLFSNASDAQKKAINE-Q 125
Query: 177 CGDLF----WSINGMGAPDL--GV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
G L + +G+ L GV I V +V PI++ +++ ++ + P
Sbjct: 126 LGQLVNSTKYEFSGLNTAQLNDGVYINVAKNQQVAKPIHIVWMTT------AQDSAFTVP 179
Query: 230 -RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R++V +E G +IE+FV + + +SV E +G+ +++H LQ + +A HI
Sbjct: 180 HRLLVNLETGASACVIEQFVSGDEAQNSFTHSVSEFNVGENARLQHYRLQQEQEDAIHIG 239
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 348
VR + ++ + ++ G K+ R ++ VQ G + ++++ +L ++Q D H+
Sbjct: 240 GVFVRLDRSADLDSFHMAFGSKIKRVDIEVQHQGEGSTSKINGVYLPKNNQHIDYHT--C 297
Query: 349 LDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVN 380
++H +C ++ + I+A S AVF+G + ++
Sbjct: 298 IEHAVPHCTSQETFRGIIADS-AHAVFNGRIHIH 330
>gi|404450970|ref|ZP_11015945.1| Iron-regulated ABC transporter permease protein SufD [Indibacter
alkaliphilus LW1]
gi|403763387|gb|EJZ24346.1| Iron-regulated ABC transporter permease protein SufD [Indibacter
alkaliphilus LW1]
Length = 424
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 131/313 (41%), Gaps = 25/313 (7%)
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQ--FPSLVL 133
L++ + Q L T P KDE ++FT I+ + ++S D Q P
Sbjct: 25 LKEKAQQRLRETGLPGIKDEEYKFTSILRKIEKSIENFSCAAASELSEEDVQESLPQGFS 84
Query: 134 IDGFIQNSA---LNLSNLPDGVYVGSLLGVSD----GIMKRVSDFISEFQCGDLFWSING 186
D + N+ LNLS + Y +LL ++ G + ++ D F ++N
Sbjct: 85 GDYLVINNGKPELNLSKISSQHYKVTLLSEAENQTLGSIAKIEK--------DPFTALNS 136
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
D I V K+E PI++ + + + + N R+++ + E EV +E
Sbjct: 137 ASFADGLSISVDKNSKIEQPIFILLFN------KANQGEVINSRLLIEIGENAEVSFLEN 190
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 306
+ + Y+AN V+EV + +++ LQN+S NA + + + +S
Sbjct: 191 TISLDER-AYFANQVVEVKASPNSQTKYAKLQNESRNAITVNNFETDIHRDAVFTSTVIS 249
Query: 307 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 366
G + R+N+ + L E + +LL D H+ + P +L+K I+
Sbjct: 250 LNGDMVRNNLSLNLLDSGCEGNMYGLYLLNGKTHVDNHTNVDHTKPHAESNELYKGILTD 309
Query: 367 SLGQAVFDGNVKV 379
S + VF+G + V
Sbjct: 310 S-SRGVFNGKIFV 321
>gi|288928614|ref|ZP_06422460.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329598|gb|EFC68183.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
Length = 447
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 140/314 (44%), Gaps = 38/314 (12%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSS-----SLDVSTDAQ 127
R+++ + +P+RK E +++TD S + +Q + P + S DV +
Sbjct: 30 REAAFEDFKRLGFPTRKTEEYKYTDISKLFEPDFGLNLQRLPMPINPYEVFSCDVPHLST 89
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF------QCGDLF 181
V+ D F+Q +A + LPDGV + SL ++ + DFI+ + GD
Sbjct: 90 ANHFVVNDAFLQPTAPH-KQLPDGVVITSLCQYAE----KNPDFIARYYGKLAATSGDAV 144
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N M A D ++YVP G K+ I + +++ VD + N RV+++VE E
Sbjct: 145 TALNTMLAQDGLLVYVPRGVKLGQTI--QVINILHAQVD----LMVNRRVLIIVEPQAEA 198
Query: 242 GIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
+ F +D + A V+E +G ++ ++ + + Q+++S
Sbjct: 199 KFL--FCDHTFDDQRFLATQVIEAFVGDNARLDLYCMEETHEKNVRVSSVYIEQQSSSRV 256
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
++ ++R+NV + G E LS +++D+ Q + + ++DH C+
Sbjct: 257 NHNVITLHNGVTRNNVSLTFRGEGAECNLSG--CVIADKKQHVDNNTVIDHAVPNCQ--- 311
Query: 361 KCIVAHSLGQAVFD 374
+H L + V D
Sbjct: 312 ----SHELYKYVLD 321
>gi|384097324|ref|ZP_09998445.1| FeS assembly protein SufD [Imtechella halotolerans K1]
gi|383837292|gb|EID76692.1| FeS assembly protein SufD [Imtechella halotolerans K1]
Length = 438
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 150/347 (43%), Gaps = 37/347 (10%)
Query: 56 LEDSLPSSSSSLPQPLPL----QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + +R + +T +PS+KDE +++T + + +
Sbjct: 3 LKDKLVSSFMIFENQVDIDSSVHDIRSEAIKTFEEKGFPSKKDEAWKYTSLNSLLKNNYS 62
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLG---- 159
+ +SL+ S D +V +DG + N + + D + S L
Sbjct: 63 VFPKEDNSLEFSDIKKYFIHDIDSYKIVFVDGVYSSNLSATSHDGLDVCLMSSALTKPKY 122
Query: 160 --VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
V D +++D D ++N + + I +P G V PI + + S G
Sbjct: 123 KMVIDNFFNKITD------KEDSLTALNTAFSREGAYINIPKGKVVNKPIQILHFST--G 174
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
++ L +PR +++V E V IIE GN NSV E+ K V + +
Sbjct: 175 RDEALML---HPRNLIIVGENSHVQIIERHQSLSGNPV-LTNSVTEIFANKNAIVDYYKI 230
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
QN S +A+ I T + Q+ S + S GG ++R+N++ E+ L ++
Sbjct: 231 QNDSKSASLIDNTFISQQRHSHASVHTFSFGGNITRNNLNFFHKDEHIESTLKGVTIIGD 290
Query: 338 DQTQDLHSRLLLDHPRGYCR--QLHKCIVA-HSLGQAVFDGNVKVNR 381
Q D ++ L+DH + C Q +K I + S+G VF+G +KV +
Sbjct: 291 KQHVDHYT--LVDHAQPNCESHQDYKGIFSDKSVG--VFNGKIKVEK 333
>gi|406672658|ref|ZP_11079883.1| FeS assembly protein SufD [Bergeyella zoohelcum CCUG 30536]
gi|405587202|gb|EKB60930.1| FeS assembly protein SufD [Bergeyella zoohelcum CCUG 30536]
Length = 426
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 138/323 (42%), Gaps = 17/323 (5%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQP-----ITRPSSSL 120
Q LQ + ++ + LS +P++KDE +++T + K P IT+ +
Sbjct: 9 KQKNTLQWEKHAALEKFLSLGFPTKKDEEYKYTHLKEVTEKDYNFSPKKTHNITKEELNQ 68
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVG-SLLGVSDGIMKRVSDFISEFQCGD 179
+ F LV ++G + +S + + ++ + + V ++ D
Sbjct: 69 LHLGEENFDWLVFVNGELHKELSKIS-IENAEFLSLEYVQSHEQYQPMVKQYLDTIANKD 127
Query: 180 LFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
L ++ G +++P +E PI++ YLS + ++ N R +++ EEG
Sbjct: 128 LAFTQLNTALYSFGFFLHIPKNTVIEKPIHVFYLSQ-----NQEENTCYNVRNLLIAEEG 182
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+V IIE + + N+V E+ + KV LQN + + + T +QE S
Sbjct: 183 AKVEIIESHHNFDTTYTF-TNAVTEIFVASNAKVDWHKLQNDNATSYLVDHTFAKQERDS 241
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
+ S GGKL R+N+ G + + ++ ++ +Q D H+ + + P Q
Sbjct: 242 LATVNTFSFGGKLVRNNLDFIHNGENINSFMNGITIIGGEQLVDHHTAVHHNQPNCESYQ 301
Query: 359 LHKCIVAHSLGQAVFDGNVKVNR 381
+K I VF+G V V++
Sbjct: 302 NYKGIFKDK-AHGVFNGKVFVDK 323
>gi|408380481|ref|ZP_11178065.1| FeS assembly protein SufD [Agrobacterium albertimagni AOL15]
gi|407745694|gb|EKF57226.1| FeS assembly protein SufD [Agrobacterium albertimagni AOL15]
Length = 425
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 132/325 (40%), Gaps = 19/325 (5%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR 115
L D+ + SLP + RD L P+R+ E F +TD + + P
Sbjct: 16 LIDAYTNQIGSLPGDGAVLLKRDGLFDALKRQGLPTRRVETFHYTDLKALLRAL--PADE 73
Query: 116 PSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVSDGIMKRVSDFISE 174
P + T S + +Q A S LPDG+ + +S G +D ++
Sbjct: 74 PQAV--AKTVDPLVSGAHVLNVLQGVAQRPSALPDGLSIALYRDALSTGA---AADGLTA 128
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
F D +NG D + V ++E PI L+ + G +L + P
Sbjct: 129 FNADDTIGRLNGAFVRDGFTLDVAEDTEIEAPIELQSVHAAG------QLHLRFPATF-- 180
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+G + +IE VG+ G+ A+ V ++ +G+G ++ LQ + H+
Sbjct: 181 -GKGSKATVIERHVGQSGS-AALASVVADLKLGEGAEITWIILQGEGDADTHLGQIRAEL 238
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 354
T + + L V+ GGKL R VHV+ G ++ L +LL D D+ L D P
Sbjct: 239 GTDAKFRLFIVNAGGKLVRQEVHVKTAGEGSDFMLRGVNLLGGDTHTDVTMTLGHDVPNT 298
Query: 355 YCRQLHKCIVAHSLGQAVFDGNVKV 379
++ + +V VF G ++V
Sbjct: 299 TSTEIIRNVV-FDRAHGVFQGMIRV 322
>gi|322833499|ref|YP_004213526.1| FeS assembly protein SufD [Rahnella sp. Y9602]
gi|384258634|ref|YP_005402568.1| FeS assembly protein SufD [Rahnella aquatilis HX2]
gi|321168700|gb|ADW74399.1| FeS assembly protein SufD [Rahnella sp. Y9602]
gi|380754610|gb|AFE59001.1| FeS assembly protein SufD [Rahnella aquatilis HX2]
Length = 433
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 136/307 (44%), Gaps = 27/307 (8%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q +L +P K E +++T S + +Q + + +++ P LV +DG
Sbjct: 42 QQVLRLGFPHAKLEDWKYTPVSSLLGNQFFAPQQQALTVEKIKSLALPLECYRLVFVDGR 101
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
S LS+ G + + +S + + D I ++F + A D + +
Sbjct: 102 FDAS---LSDSDTGAF--EIEKLSPSAQQTLPDPIQ----SEVFLHLTESLAQDSFSVRL 152
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P G E P+YL +LS G S+++ + R + +E G +IE ++ + ++
Sbjct: 153 PVGKHAEKPLYLLHLS--SGRDQSREMNTVHHRYHLAIENGANAEVIEHYLSL-NDQGHF 209
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV---RQETASGYELVEVSTGGKLSRH 314
+ + + +G H L +S + H + R S + + G L+R+
Sbjct: 210 TGARMTINVGDNADFTHYKLAFESQASFHFSHNDLVIGRDARVSSHSFL---LGAGLTRN 266
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
N Q G ++ +++S L V + D +R L+H +GYC +QLHK IV + +A+
Sbjct: 267 NTSAQLNGENSNLDINSLVLPVDSEIAD--TRTYLEHNKGYCNSKQLHKVIV-NDRAKAI 323
Query: 373 FDGNVKV 379
F+G +KV
Sbjct: 324 FNGMIKV 330
>gi|218294672|ref|ZP_03495526.1| FeS assembly protein SufD [Thermus aquaticus Y51MC23]
gi|218244580|gb|EED11104.1| FeS assembly protein SufD [Thermus aquaticus Y51MC23]
Length = 431
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 143/339 (42%), Gaps = 40/339 (11%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P K R + + P+PSRKDE +R+TD S + + +
Sbjct: 13 SQALGEPAWALKKRLEALEAFARLPYPSRKDENWRYTDLSEAPLDRPVEAPKGLSLTRDT 72
Query: 109 QIQPITRPSSSLDVSTDAQF--PSLVLID--GFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ + R DV+ F P LV + ++ L L++L + + + V G+
Sbjct: 73 LPEAVKRRLEKTDVAAFLVFVGPDLVYAEVPEELKAQGLVLTSLAEAMRLHPE-KVEAGL 131
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+ V D F + N +YVPAG ++E P+ + + +EG
Sbjct: 132 FQAVF-------TEDKFAAQNSAFFTHGAFLYVPAGLELEKPVGVFKVLLEGSKA----- 179
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
S R ++ +E+ + IEE++ + S E+V+ G ++RH++++
Sbjct: 180 --SAGRSLLFLEDNAKAAYIEEYLSPDLPPTLHL-SATEMVLRPGARLRHAHVETFGNGV 236
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
H E +G + V+ GG +R V + LGP +E+E+ + Q D +
Sbjct: 237 WHFHRQRALLERDAGLNDLVVNLGGAYARSEVASELLGPGSESEMLGLYFGHGRQQFDHY 296
Query: 345 SRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNVKVNR 381
+ L H + R L+K V +AVF G +++ R
Sbjct: 297 T--LQHHVEHHTRSDLLYKGAVKDE-ARAVFSGLIRLER 332
>gi|345868944|ref|ZP_08820907.1| feS assembly protein SufD [Bizionia argentinensis JUB59]
gi|344046428|gb|EGV42089.1| feS assembly protein SufD [Bizionia argentinensis JUB59]
Length = 437
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 144/341 (42%), Gaps = 18/341 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + P+ +R + +T + +P +K+E +++T +
Sbjct: 1 MELKDKLVTSFMAFEDRIDVDSPVHDIRSEAMKTFEADGFPGKKNEDWKYTSLKSVLKHD 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ + +D D +V +DG + S+ +G+ V + +
Sbjct: 61 YSVFPKQENHIDYQAVKKYFIHDIDTYKIVFVDG--KYSSYLSETTHEGIDVCLMSSALN 118
Query: 163 GIMKR--VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
R + ++ ++ D S+N + + I++P V PI + + + GN
Sbjct: 119 KPKYRLIIENYFNKIAGKDSITSLNTAFSQEGAYIHIPKNKLVAKPIQIIHFAT--GNES 176
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ L PR +++V+E V IIE N NSV E+ K V + +QN
Sbjct: 177 ALMLQ---PRNLIVVDENSHVQIIERHQSLTDNPV-LTNSVTEIYSNKRAIVDYYKIQND 232
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ NA+ I T V Q+ S + S GGKL+R+N+ Q G ++ L ++ Q
Sbjct: 233 NENASLIDNTFVNQKRESHSSVHTFSFGGKLTRNNLSFFQNGERIDSTLKGVTIIGKKQH 292
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K I A S VF+G V V++
Sbjct: 293 VDHNTLVHHIEPNCESHQDYKGIYADS-SSGVFNGKVLVSK 332
>gi|333982946|ref|YP_004512156.1| FeS assembly protein SufD [Methylomonas methanica MC09]
gi|333806987|gb|AEF99656.1| FeS assembly protein SufD [Methylomonas methanica MC09]
Length = 433
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 34/321 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD--AQFP- 129
LQ+ R + + +P+ +DE +R+T+ +++ + + PS + DV D A +
Sbjct: 29 LQQFRSEGLKAFETHGFPNPRDEEWRYTNLAVLNKT----LFAPSDNQDVDADWLAAYRL 84
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL----- 180
S+VL++G + LS LP V V S VS + S + E + G
Sbjct: 85 ENAWSVVLVNGRFSAALSRLSGLPAAVSVQS---VSTALRNNPS--VLETRLGKAVGNDE 139
Query: 181 --FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
+ N D VI + A ++ P+ + + V + ++ R + ++E+G
Sbjct: 140 HSLVAFNSAWFADGVVIEIAANQRLAKPLQIVH-------VVTSPDALAASRNLFVLEQG 192
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
E I+E ++G + Y++ +V E + + + S +Q ++ A H T V+Q S
Sbjct: 193 AEAEIVETYIGSAAS--YFSAAVNECFLEQNAGLTLSKMQVEADKACHFGGTYVKQAHHS 250
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
+ GG L+R ++H L +E ++ +L + Q D H+R+ P+G R+
Sbjct: 251 RLLHHNFAFGGLLARTDIH-SDLDLASECRVNGLYLGANRQHIDNHTRINHLKPQGISRE 309
Query: 359 LHKCIVAHSLGQAVFDGNVKV 379
+K ++ + + VF G V V
Sbjct: 310 FYKGVLDNR-ARGVFQGRVIV 329
>gi|423315855|ref|ZP_17293760.1| FeS assembly protein SufD [Bergeyella zoohelcum ATCC 43767]
gi|405585571|gb|EKB59395.1| FeS assembly protein SufD [Bergeyella zoohelcum ATCC 43767]
Length = 426
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 142/324 (43%), Gaps = 19/324 (5%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQP-----ITRPSSSL 120
Q LQ + ++ + LS +P++KDE +++T + K P IT+ +
Sbjct: 9 KQKNTLQGEKHAALEKFLSLGFPTKKDEEYKYTHLKEVTEKDYNFSPKKTHNITKEQLNQ 68
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR--VSDFISEFQCG 178
+ F LV ++G + +S + + ++ SL V + + V ++
Sbjct: 69 LHLGEENFDWLVFVNGELHKELSKIS-IENAEFL-SLEYVQNHEQYQPMVKQYLDTIANK 126
Query: 179 DLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
DL ++ G +++P +E PI++ YLS + ++ N R +++ EE
Sbjct: 127 DLAFTQLNTALYSFGFFLHIPKNTVIEKPIHVFYLSQ-----NQEENTCYNVRNLLIAEE 181
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
G +V IIE + + N+V E+ + KV LQN + ++ + T +QE
Sbjct: 182 GAKVEIIESHHNFDTTYTF-TNAVTEIFVASNAKVDWHKLQNDNASSYLVDHTFAKQERD 240
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S + S GGKL R+N+ G + + ++ ++ +Q D H+ + + P
Sbjct: 241 SLATVNTFSFGGKLVRNNLDFIHNGENINSFMNGITIIGGEQLVDHHTAVHHNQPNCESY 300
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
Q +K I VF+G V V++
Sbjct: 301 QNYKGIFKDK-AHGVFNGKVFVDK 323
>gi|424035753|ref|ZP_17774922.1| feS assembly protein SufD [Vibrio cholerae HENC-02]
gi|408897418|gb|EKM33204.1| feS assembly protein SufD [Vibrio cholerae HENC-02]
Length = 415
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 149/338 (44%), Gaps = 45/338 (13%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT--------DTSMIKSSQIQ 111
+P S P+ + L ++ Q L+ P+R+ E +++T D S + + +
Sbjct: 1 MPFSDYLKPRLIELDEVAKYHWQAALAQGLPTRQHEDWKYTSLEGFDAIDFSSQRETDVS 60
Query: 112 PITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF 171
+ LD+ + LV ++G Q NLS++ + SLL +G K+
Sbjct: 61 MAFVQAHKLDMDAE----RLVFVNGQFQP---NLSDIDGEAFRLSLL---NGDAKQA--- 107
Query: 172 ISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPISNP 229
+ ++F + + +I V A V PIYL + +GG +++
Sbjct: 108 LPAAIAPEIFLHLTEAFSDTTLLIEVDAKHTVAKPIYLMQIESRPQGG--------MAHH 159
Query: 230 RVVVLVEEGGEVGIIEEFVGK-EGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
RV + V + EV I+E + GN ++ S L + + ++ H L S+ H
Sbjct: 160 RVHLKVGQSSEVKIVEHLLSACHGNRVAASYSGSRLTMEVSDNAELTHYKLCLGSVEHYH 219
Query: 287 IKWTAV---RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
+ R S + G+L+RH+ Q G +TE E++S L QT D
Sbjct: 220 FAHNDLFVGRDANVSSQTFL---LAGQLTRHHTSCQLNGENTEIEINSLALPSHQQTYD- 275
Query: 344 HSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+R L+H +G+C +QLHK I+A G+AVF+G +KV
Sbjct: 276 -TRTYLEHNKGHCTSQQLHK-IIASQQGKAVFNGMIKV 311
>gi|163786784|ref|ZP_02181232.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
gi|159878644|gb|EDP72700.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
Length = 437
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 148/344 (43%), Gaps = 24/344 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + +++ P+ +R + +T + +P+++ E +++T + +
Sbjct: 1 MSLKEKLVSSFMAFENTIDVDSPVHDIRTEAIKTFETEGFPTKRQEAWKYTSLNSVLKHD 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ ++L+ D ++ IDG + S+ DG+ V + S
Sbjct: 61 YSVFPKHENALEFKDVKKYFIHDIDSYKIIFIDG--KYSSHLSQTTHDGIDVCLM---SA 115
Query: 163 GIMK-----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
+ K + ++ ++ D S+N + + I++P V+ PI + + S G
Sbjct: 116 ALTKPKYQLIIENYFNKIASKDSLASLNTAFSSEGAYIHIPKNKLVDKPIQIIHFST--G 173
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
N + L PR +V+V+E V IIE N NSV E+ K V + +
Sbjct: 174 NEAALMLQ---PRNLVVVDENSHVQIIERHQSLTDNPV-LTNSVTEIFTNKRAIVDYYKI 229
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
QN + NA+ I T V Q+ S ++ S GGKL R+N++ Q G ++ + ++ +
Sbjct: 230 QNDNENASLIDNTYVNQKQESLAKVHTFSFGGKLIRNNLNFYQNGERIDSTMKGITIIGN 289
Query: 338 DQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q D ++ + P Q +K I VF+G V V +
Sbjct: 290 KQHVDHNTLVHHIEPNCESHQDYKGIFDDG-ATGVFNGKVVVEK 332
>gi|88706201|ref|ZP_01103908.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
gi|88699595|gb|EAQ96707.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
Length = 435
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 142/334 (42%), Gaps = 21/334 (6%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR 115
++ +L +S +P L Q ++ P+R+ E +++T ++++ +
Sbjct: 5 MQQALAEASRQVPHWL--QSVQARGLSLWQEADLPTRRTENWKYTGLNVLRDDY--HLAD 60
Query: 116 PSSSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSD 170
S +LD D LV +DG Q SAL+ + DGV V + +++
Sbjct: 61 GSLTLDALPDKWAAGCGGTRLVFVDGIYQ-SALSTAASADGVRVCRFEDADEEQSAKIAG 119
Query: 171 FIS-EFQCGD-LFWSINGMGAPDLGVIYVPAGCKV-ENPIYLKYLSVEGGNVDSKKLPIS 227
++ D LF ++N D ++ + A E PI +L V + P +
Sbjct: 120 HLNGALNVEDHLFAALNTATLRDGVLVEIAANTAADEAPIECLWL------VSAVDAPTA 173
Query: 228 -NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
N R++VL E G ++E F + + N + E+++G ++ H + +S +A H
Sbjct: 174 ANQRLLVLAESGASATVVEHFASLDDAKDSFCNGLTELMLGPNARLSHYRIHEESGSAVH 233
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
I R + + E ++ G L R ++ + GP L+ +L D+ D HS
Sbjct: 234 IGGVHARLDRDAHLESFHLALGSVLKRFDLVINHAGPGAYASLNGVYLPRGDEHIDYHST 293
Query: 347 LLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
+ P ++ + I+A AVF+G + ++
Sbjct: 294 IEHAVPHCSSDEIFRGIIADK-ATAVFNGRIHIH 326
>gi|383449388|ref|YP_005356109.1| Fe-S assembly protein, SufD [Flavobacterium indicum GPTSA100-9]
gi|380501010|emb|CCG52052.1| Fe-S assembly protein, SufD [Flavobacterium indicum GPTSA100-9]
Length = 438
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 145/342 (42%), Gaps = 19/342 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + L ++R + + + +PS+K+E +++T + I
Sbjct: 1 MELKDKLVASFMAFEEKINDNAELHEVRSQAIKNFETKGFPSKKEEAWKYTSLNAILKHD 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ ++++ D +V IDG + S+ S DG+ V L ++
Sbjct: 61 FSVFPKHENAIEFKDVKKYFLHDVDTYKVVFIDG--KFSSFLSSTTHDGLDVCLLSSALT 118
Query: 162 DGIMKRVSD-FISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K V D + ++ + ++N A + I+VP VE PI + Y S GN
Sbjct: 119 KPKYKMVIDTYFNQIASKEETLTTLNTAFAFEGAYIHVPKSKVVEKPIEIIYFST--GN- 175
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + PR +++V E V I+E N NSV E+ K V + +QN
Sbjct: 176 --EAALMVQPRNLIIVGENAHVQIVERHQSLNSNPV-LTNSVTEIFAQKRAIVDYYKVQN 232
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
L A + T + Q+ S + S GG ++R+N++ G ++ L ++ +Q
Sbjct: 233 DVLTANLVDNTYIAQKQESRVAVHTFSFGGNITRNNLNFYHQGERIDSTLKGITIIGENQ 292
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +KCI+ VF+G + V +
Sbjct: 293 HVDHYTLVHHAQPNCESHQNYKCILDDK-ATGVFNGKIFVEK 333
>gi|261881039|ref|ZP_06007466.1| Fe-S cluster assembly protein SufD [Prevotella bergensis DSM 17361]
gi|270332221|gb|EFA43007.1| Fe-S cluster assembly protein SufD [Prevotella bergensis DSM 17361]
Length = 453
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 151/342 (44%), Gaps = 33/342 (9%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
S+ I L E L SS+ PL +RD + + P+RK E +++TD
Sbjct: 3 SEKQYIDLYEQARQMLFEHSSA-----PLNAVRDKAFEDFKKQGLPNRKVEDYKYTDMQK 57
Query: 105 -------IKSSQIQPITRP--SSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVG 155
+ +IQ P S S DV + V+ D F + + LP+GV VG
Sbjct: 58 LFEPDYGVNLKRIQFPINPYQSFSCDVPNLSTSLYFVVNDQFY-SKVHPKTTLPEGVIVG 116
Query: 156 SLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
SL ++ + ++ + ++ GD ++N M A D +YVP K++ I + ++
Sbjct: 117 SLKEQAERNPELITKYYAKLAKTNGDPLTALNTMLAQDGLFVYVPKNVKMDRAI--QVVN 174
Query: 214 VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKV 272
+ +VD + N RV+++VEEG EV + F +D + V+E +G+ +
Sbjct: 175 ILRSDVD----LMVNRRVLIIVEEGAEVKFL--FCDDSADDRNFLGTQVIEAFVGENASL 228
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 332
L+ I + Q+ S ++ ++R+++ + G E +
Sbjct: 229 DLYCLEATHHKNVRISNVYIDQQANSRVNHNVITLHNGITRNHLELVFKGEGAECWCNG- 287
Query: 333 HLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAV 372
+++D Q + + L+DH G+C+ QL+K ++ G+AV
Sbjct: 288 -CVIADGNQHVDNNTLIDHRVGHCKSNQLYKYVLD---GKAV 325
>gi|408674679|ref|YP_006874427.1| FeS assembly protein SufD [Emticicia oligotrophica DSM 17448]
gi|387856303|gb|AFK04400.1| FeS assembly protein SufD [Emticicia oligotrophica DSM 17448]
Length = 443
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 149/333 (44%), Gaps = 44/333 (13%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS 130
LP+ +LR + + +PS + E +++++ S + + D T F
Sbjct: 33 LPVHQLRGEAMKNFEKLGFPSIRHEEWKYSNVSNL----------VKQTFDFHTKTDFNQ 82
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSL------------LGVSDGIMKR---VSDFISEF 175
L + N N+ +GVY L L ++ + ++ + +++
Sbjct: 83 SDLDKIALPNLTGNVLYFINGVYSAELSQIVSPDNKLKVLPFAEALAQQPELIEGHFAKY 142
Query: 176 QC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVV 232
D F ++N + D V+ V VE PI L++++ D++ S PR +
Sbjct: 143 ANYETDAFTALNTALSHDGVVVQVADNKIVEEPIILRFIT------DARTANAGSQPRNL 196
Query: 233 VLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
V+V + +V I E + VG+E + N+V E+V+ + V + +QN+S + HI T
Sbjct: 197 VVVGKNSQVKIAEAYRTVGEE---AAFVNTVTEIVVAESAMVDYYKVQNESDKSYHIGTT 253
Query: 291 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 350
V Q++ S + V+ G R+N+++ G E+ + + L V + Q + + L+D
Sbjct: 254 QVYQKSNSYFYAATVTINGGFVRNNLNIVLDGEHVESHM--YGLYVPNGKQHVDNHTLVD 311
Query: 351 HPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
H + C+ +L+K ++ VF+G + V +
Sbjct: 312 HQKPNCQSNELYKGVLMDK-STGVFNGKIFVRQ 343
>gi|320539151|ref|ZP_08038822.1| putative truncated component of SufBCD complex [Serratia symbiotica
str. Tucson]
gi|320030789|gb|EFW12797.1| putative truncated component of SufBCD complex [Serratia symbiotica
str. Tucson]
Length = 400
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
++F + A + +I++PAG P+YL L + GN ++ + R + + G
Sbjct: 62 EIFLHLTESLAQETSIIHLPAGKAATRPLYL--LHISSGNGTEGEVNTVHHRHHLAIAHG 119
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+ +IE +V G+ ++ + L + ++ H L +S + H + +
Sbjct: 120 AQAEVIEHYVSL-GDAAHFTGARLTANVADNAELLHCKLAFESYPSYHFSHNDLVIGRDA 178
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
+ G L+RHN Q GP ++S L + + D +R LDH +GYC
Sbjct: 179 RVKSDSFLLGAGLTRHNTSAQLNGPGANLAINSLVLPIGKEVCD--TRTYLDHNQGYCES 236
Query: 357 RQLHKCIVAHSLGQAVFDGNVKVNR 381
RQ+HK +V+ +AVF+G + V +
Sbjct: 237 RQMHKTVVSDG-AKAVFNGMINVAK 260
>gi|358447747|ref|ZP_09158263.1| FeS assembly protein SufD [Marinobacter manganoxydans MnI7-9]
gi|385332727|ref|YP_005886678.1| FeS assembly protein SufD [Marinobacter adhaerens HP15]
gi|311695877|gb|ADP98750.1| FeS assembly protein SufD [Marinobacter adhaerens HP15]
gi|357228100|gb|EHJ06549.1| FeS assembly protein SufD [Marinobacter manganoxydans MnI7-9]
Length = 428
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 142/328 (43%), Gaps = 21/328 (6%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SLP+PL LR L+ P P+RK E ++++ + +K + I+ P+
Sbjct: 12 LHPAGQSLPEPL--LALRKQRGTALVDMPLPTRKTENWKYS-SKYLKLTDDMAISLPADG 68
Query: 120 LDVSTDAQFP--SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC 177
+ P + ++G + A +L DG+ + S +SD ++D +
Sbjct: 69 -KTGSGLAVPGYKVAFLNGVMMPEACEYPDL-DGISIKSFGDLSDEEASDLADRLDSTLD 126
Query: 178 GDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
+N D +I + ++ P+++ + V ++ + PR+ V
Sbjct: 127 NKAVQMARLNSARFEDGLLIRLKPDAVLDQPLFIVH------EVTAEASGSAFPRIFVDA 180
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
++ ++EE++ G+ N+V E + G + L + N HI T V Q+
Sbjct: 181 GRHSQITLVEEYISS-GSAQVMVNTVTEFNVADGANITSIRLNMEGENVQHIGSTGVLQQ 239
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
+S +E V GG L RH++ V+ G E +L+ + Q D H+ ++H +
Sbjct: 240 RSSRFESHTVGFGGPLRRHDLQVRLEGEGAECKLNGVVVTQGKQHYDNHT--TIEHVAAH 297
Query: 356 C--RQLHKCIVAHSLGQAVFDGNVKVNR 381
C + ++ I A AVF+G + +++
Sbjct: 298 CNSEETYRNIAADQ-SHAVFNGRIHIHQ 324
>gi|422008416|ref|ZP_16355400.1| cysteine desulfurase activator complex subunit SufD [Providencia
rettgeri Dmel1]
gi|414094889|gb|EKT56552.1| cysteine desulfurase activator complex subunit SufD [Providencia
rettgeri Dmel1]
Length = 435
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 29/295 (9%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS 146
TP + + +RF+D ++ + +L + DA LVLIDG ++ LS
Sbjct: 66 TPLNTVLETQYRFSDGDVV--------AQDCEALALPIDAY--RLVLIDGRYSSA---LS 112
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENP 206
++ G + +LL D + V+ ++F + A V+++ A E P
Sbjct: 113 SIDMGPFQVALLDNQDLLPSPVN--------SEIFLHLTESLAVQPLVVHLAANKIAEKP 164
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
+YL L++ G+ D + IS R + ++ + +IE +V + S L V +
Sbjct: 165 LYL--LNISTGSGDKQATNISQYRYHLTLDANSKAQVIEHYVSL-NEQRHMTGSRLTVEV 221
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTE 326
G H L ++ A H + S + G L+R++ + G +TE
Sbjct: 222 GDNADFSHFKLNVENGQAQHFAHNDIVIGRDSRVKSTSFLLGALLTRNHTSARLDGENTE 281
Query: 327 TELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
EL+S L ++ D +R L+H +GYC RQLHK I S +AVF+G +KV
Sbjct: 282 FELNSILLPKGNEIAD--TRTYLEHNKGYCNSRQLHKVIAMDS-SKAVFNGMIKV 333
>gi|209885129|ref|YP_002288986.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
gi|209873325|gb|ACI93121.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
Length = 439
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 143/336 (42%), Gaps = 28/336 (8%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS-SQIQPITR 115
D ++ LP P+ R ++ + S P R+ E +++TD +++++ + + P+
Sbjct: 19 DVFAAARDRLPGEGPVATARKAAFEDFTSRGLPHRRIEEWKYTDLRALLRAVAPLAPVPG 78
Query: 116 PSSSLDVSTDA------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
++ + L L+DG + +L+ LP GV V SL + +
Sbjct: 79 DAALALAAKAQAAIGIENATRLTLVDGVLAPKLSDLALLPKGVRVRSL---RESLAAGAV 135
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPIS 227
D + D S NG A D ++ V G +E P+Y+ +++ +V K+ I
Sbjct: 136 DLLKTTFAADAMISFNGAMATDGVLVEVDDGVILERPLYIAHVATASSASSVTRSKIAIG 195
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V LV E FV G Y + +++ +G +++H L + +AA+I
Sbjct: 196 KKACVTLV---------ESFVAA-GATAYQVHDQVDISVGDDSELQHIRLMEDARDAANI 245
Query: 288 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 347
A ++ G +SR+ + LG D+E + +LL + D + L
Sbjct: 246 TTAAFTLGARVKLNTFGLNQGAAVSRYQGFISFLGEDSELSTNGVNLLGGRRHAD--TTL 303
Query: 348 LLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+++H P R++ + ++ ++VF G + V +
Sbjct: 304 VVNHAVPNCTSREIFRAVL-DDQSRSVFQGRIIVQQ 338
>gi|421492060|ref|ZP_15939422.1| YNHC [Morganella morganii subsp. morganii KT]
gi|400193820|gb|EJO26954.1| YNHC [Morganella morganii subsp. morganii KT]
Length = 430
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 34/308 (11%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDG 136
Q T +P+ E + +T + + + Q T +L+V +A SL VL+DG
Sbjct: 42 QQAQKTGFPAFHQEDWHYTSLTPLLEADYQDKT---GTLNVLPEAVLTSLNAYRIVLVDG 98
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC---GDLFWSINGMGAPDLG 193
A S+ GV+ S V+D +EF G++F + A
Sbjct: 99 VF---APQWSDTDTGVFELS-----------VADRHNEFPAPVNGEIFLHLTESLAQTPL 144
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I V AG + E +Y+ +++ + DS L + + R + + V +IE F+ +
Sbjct: 145 MIRVKAGAQAEKSLYI--VNISTAHNDS--LNMRHSRYHLDIGVNAAVSVIEHFISPDEQ 200
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
++ + + +G+ RH L ++ A H + + E GGKL+R
Sbjct: 201 SAHFTGARMTANVGENSDFRHLKLGFENPQAYHFAHNDLVIAAHARVESTSFLLGGKLTR 260
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQA 371
H+ Q G ++S L + D +R L+H +GYC RQ HK IV + +A
Sbjct: 261 HHTSTQLNGEGIVLAMNSLVLPKHGEIAD--TRTYLEHNKGYCESRQRHKTIVMDN-SRA 317
Query: 372 VFDGNVKV 379
VF+G +KV
Sbjct: 318 VFNGMIKV 325
>gi|390954259|ref|YP_006418017.1| Iron-regulated ABC transporter permease protein SufD [Aequorivita
sublithincola DSM 14238]
gi|390420245|gb|AFL81002.1| Iron-regulated ABC transporter permease protein SufD [Aequorivita
sublithincola DSM 14238]
Length = 437
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 22/340 (6%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
S +D L SS +L L PL +R+ + + +P++K+E +++T + +
Sbjct: 2 SFKDKLLSSYIALEDYLEFDSPLHDVRNGAIKIFEEQGFPTKKEEAWKYTSLNSLLKPDY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLS--NLPDGVYVGSLLGVS 161
+ +++ Q+ LV +DG + NS L+ + + D + + L S
Sbjct: 62 SVYSNKERHVELQDVRQYFLHEIDTYKLVFVDG-VYNSFLSETTHDTLDVCLMSAALNKS 120
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
+ + ++ D S+N + I +PA +VE PI + ++ GN +
Sbjct: 121 -KYKPVIEAYFNKVAKSDSLTSLNTAFTKEGAYINIPAHKEVEKPIEI--INFSTGNEAA 177
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
L PR +++V E V IIE N+ NSV E+ K V + +QN
Sbjct: 178 MFLQ---PRNLIVVGENAHVQIIERHQSLSSNEV-LTNSVTEIFAEKRAYVDYYKIQNDE 233
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
A+ I T + Q+ + + S GG L R+N++ Q G + ++ L +L Q
Sbjct: 234 ATASLIDNTYISQQRDTVCRVHTFSFGGNLVRNNLNFYQKGENCDSTLKGITILEGKQHV 293
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K + A S VF+G + V R
Sbjct: 294 DHNTLVHHISPNCESHQDYKGLYAGS-STGVFNGKIVVER 332
>gi|337741244|ref|YP_004632972.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
gi|386030260|ref|YP_005951035.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM4]
gi|336095328|gb|AEI03154.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM4]
gi|336098908|gb|AEI06731.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
Length = 436
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 143/336 (42%), Gaps = 28/336 (8%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS-SQIQPITR 115
D ++ LP P+ R ++ + S P R+ E +++TD +++++ + + P+
Sbjct: 16 DVFAAARDRLPGEGPVATARKAAFEDFTSRGLPHRRIEEWKYTDLRALLRAVAPLAPVPG 75
Query: 116 PSSSLDVSTDA------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
++ + L L+DG + +L+ LP GV V SL + +
Sbjct: 76 DAALALAAKAQAAIGIENATRLTLVDGVLAPKLSDLALLPKGVRVRSL---RESLAAGAV 132
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPIS 227
D + D S NG A D ++ V G +E P+Y+ +++ +V K+ I
Sbjct: 133 DLLKTTFAADAMISFNGAMATDGVLVEVDDGVILERPLYIAHVATASSASSVTRSKIAIG 192
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V LV E FV G Y + +++ +G +++H L + +AA+I
Sbjct: 193 KKACVTLV---------ESFVAA-GATAYQVHDQVDISVGDDSELQHIRLMEDARDAANI 242
Query: 288 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 347
A ++ G +SR+ + LG D+E + +LL + D + L
Sbjct: 243 TTAAFTLGARVKLNTFGLNQGAAVSRYQGFISFLGEDSELSTNGVNLLGGRRHAD--TTL 300
Query: 348 LLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+++H P R++ + ++ ++VF G + V +
Sbjct: 301 VVNHAVPNCTSREIFRAVL-DDQSRSVFQGRIIVQQ 335
>gi|338980845|ref|ZP_08632094.1| FeS assembly protein SufD [Acidiphilium sp. PM]
gi|338208257|gb|EGO96133.1| FeS assembly protein SufD [Acidiphilium sp. PM]
Length = 245
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 252 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
G Y V EV +G G ++ H LQ++S A H+ +GYE ++ G +L
Sbjct: 16 GEGSYLHAPVFEVDLGAGARLNHYRLQDESAEAVHVATIFAEIAGGAGYESFTLNRGARL 75
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 371
SR+ H + GP + L++ LL Q D+ + + D P RQ K ++A + +
Sbjct: 76 SRNETHARLTGPAADVHLNAAQLLTGTQHGDVTTVVRHDAPDCASRQTVKSVLAGA-ARG 134
Query: 372 VFDGNVKVNR 381
VF G ++V+R
Sbjct: 135 VFQGRIEVDR 144
>gi|37520941|ref|NP_924318.1| hypothetical protein glr1372 [Gloeobacter violaceus PCC 7421]
gi|35211936|dbj|BAC89313.1| glr1372 [Gloeobacter violaceus PCC 7421]
Length = 444
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 16/295 (5%)
Query: 90 PSRKDEPFRFTDTSMIKSSQI----QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNL 145
P R+ E +R TD S + ++ +P++ L T + LV +DG N
Sbjct: 51 PHRRLENWRHTDLSALTKNRFTLAAEPVSIDPVQLVPYTFSGARELVFVDGLFSAELSNP 110
Query: 146 SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVEN 205
G+ +GS ++ + + + + + ++NG D + + A +VE
Sbjct: 111 GKAQSGLLLGS---YAECLPEDALRWAVAPEAAEALEALNGAYWQDGACVDLAADARVEE 167
Query: 206 PIYLKYLSVEGGNVDSKKLPISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEV 264
PI+L +++ LP++ R + G IIE + G ++ V V
Sbjct: 168 PIHLLFIAT------GADLPLAQFVRNRITAGPGSRATIIETYA-SLGAGVHFTCPVGAV 220
Query: 265 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 324
+G + H L ++ A H+ + VR + ++ + GG L RH++ + GP
Sbjct: 221 DVGADADLDHYRLGQENAAAFHLATSRVRLGRDARFKSLAFVAGGGLVRHDLFAELAGPG 280
Query: 325 TETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+E L +L + D H + P RQ++K I+A +AVF+GNV V
Sbjct: 281 SEATLHGLYLAGGTRHVDHHLWVRHSAPHAASRQIYKGILA-GRARAVFNGNVFV 334
>gi|115524971|ref|YP_781882.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisA53]
gi|115518918|gb|ABJ06902.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisA53]
Length = 439
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 140/328 (42%), Gaps = 28/328 (8%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI--------QPITRPSS 118
LP + + R+ + ++ P+R+ E +++TD ++ + + R +
Sbjct: 24 LPGAAAVAEKRELAFESYARQGLPNRRVEDWKYTDLRVLMREVLPLAAGPDHATLARAAD 83
Query: 119 SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
+L + +VL+DG +L++L DG+ + +L D + + D +
Sbjct: 84 ALKLHAIEGVRRIVLVDGVFVADLSDLADLEDGLVIRALREALDQ-GEPLEDRWPAPETA 142
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEE 237
D ++N D VI V A + P+ + +++ + P++ R ++ +
Sbjct: 143 DAMVALNTAMMTDGVVIEVGADIVLARPLQIVHVA-------AAATPVAIVTRSLLRLGR 195
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
++E FV G Y + L++ I G ++ L + +A HI +
Sbjct: 196 NARATLVESFVAAGGTKGYQTHDALQIAIEDGARLEQIRLNEDATDAFHIASCFATLGAS 255
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC- 356
+G ++TGG +SR+ ++ G +E + +LL + TQ + L LDH +C
Sbjct: 256 AGLNTFNLTTGGAVSRYQAFIRFNGEGSEVMTNGVNLL--NGTQHGDTTLFLDHAVPHCS 313
Query: 357 -RQLHKCIV---AHSLGQAVFDGNVKVN 380
R++ + ++ AHS VF G + V
Sbjct: 314 SREVFRAVLDGRAHS----VFQGRIIVR 337
>gi|384432018|ref|YP_005641378.1| FeS assembly protein SufD [Thermus thermophilus SG0.5JP17-16]
gi|333967486|gb|AEG34251.1| FeS assembly protein SufD [Thermus thermophilus SG0.5JP17-16]
Length = 431
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 137/346 (39%), Gaps = 54/346 (15%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P L + R + + P+PS+KDE +R+TD S + +
Sbjct: 13 SKALGEPGWLLEKRLKALEAFARLPYPSKKDENWRYTDLSEAPLELPVEAPKGLRLSRDD 72
Query: 109 QIQPITRPSSSLDVS----------TDAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSL 157
+P+ R DVS A+ P + G + S A L PD V
Sbjct: 73 LPEPVKRRLERTDVSGFLVFVGPDLVYAEVPEALKEKGLVFTSLAEALKTHPDKVEAALF 132
Query: 158 LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
V D F + N +YVPAG +VE P+ + + +EG
Sbjct: 133 QAV---------------YTEDKFAAQNSAFFTHGAFLYVPAGLEVEKPLGVFKVLLEGE 177
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
S R ++ +E+ + IEE++ + + S E+V+ G ++RH+++
Sbjct: 178 KA-------SAGRSLLFLEDNAKAAYIEEYLSLDLSPTLHL-SATEMVLRPGARLRHAHV 229
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
Q H E SG + V+ GG +R V + +GP E+E+ +
Sbjct: 230 QTFGEGVWHFHRQRALLERDSGLNDLVVNLGGAYARSEVASELVGPGAESEMLGLYFGHG 289
Query: 338 DQTQDLHSRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNVKVNR 381
Q D ++ L H + R L+K V +AVF G +++ +
Sbjct: 290 RQQFDHYT--LQHHVEHHTRSDLLYKGAVKDE-ARAVFSGLIRLEK 332
>gi|46199791|ref|YP_005458.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|55981809|ref|YP_145106.1| SufD protein membrane protein [Thermus thermophilus HB8]
gi|46197418|gb|AAS81831.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|55773222|dbj|BAD71663.1| SufD protein (membrane protein) [Thermus thermophilus HB8]
Length = 431
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 136/346 (39%), Gaps = 54/346 (15%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P L + R + + P+PS+KDE +R+TD S + +
Sbjct: 13 SKALGEPAWLLEKRLKALEAFARLPYPSKKDENWRYTDLSEAPLELPVEAPKGLRLSRDD 72
Query: 109 QIQPITRPSSSLDVS----------TDAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSL 157
+P+ R DVS A+ P + G + S A L PD V
Sbjct: 73 LPEPVKRRLERTDVSGFLVFVGPDLVYAEVPEALKEKGLVFTSLAEALKTHPDKVEAALF 132
Query: 158 LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
V D F + N +YVPAG +VE P+ + + +EG
Sbjct: 133 QAV---------------YTEDKFAAQNSAFFTHGAFLYVPAGLEVEKPLGVFKVLLEGE 177
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
S R ++ +E+ + IEE++ + S E+V+ G ++RH+++
Sbjct: 178 KA-------SAGRSLLFLEDNAKAAYIEEYLSLDLPPTLHL-SATEMVLRPGARLRHAHV 229
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
Q H E SG + V+ GG +R V + +GP E+E+ +
Sbjct: 230 QTFGEGVWHFHRQRALLERDSGLNDLVVNLGGAYARSEVASELVGPGAESEMLGLYFGHG 289
Query: 338 DQTQDLHSRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNVKVNR 381
Q D ++ L H + R L+K V +AVF G +++ +
Sbjct: 290 RQQFDHYT--LQHHVEHHTRSDLLYKGAVKDE-ARAVFSGLIRLEK 332
>gi|325916456|ref|ZP_08178728.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
vesicatoria ATCC 35937]
gi|325537376|gb|EGD09100.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
vesicatoria ATCC 35937]
Length = 420
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 133/292 (45%), Gaps = 17/292 (5%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST- 124
SL + R + L T P + E +++T ++ QP + LD +
Sbjct: 7 SLARGFSGDDARRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLLDAAVL 66
Query: 125 -DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD- 179
D P LV ++G + ++S LPDGV + +L L D + F D
Sbjct: 67 DDIPAPRLVFVNGRPSAALSDVSTLPDGVQLDTLSAALAAGDDARHLLG---RRFDGSDA 123
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F +N A + ++ V G ++ P+++ ++ V G + S R ++ + G
Sbjct: 124 VFARLNAALADEGVLVRVHDGAQIALPLHIVFVGVAGEHDLSWHY-----RHLIELRAGA 178
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ ++E + G+ + NSV+ V +G+ + H+ +Q S++A + T +
Sbjct: 179 ALNVVEHHL-HVGDAAHLDNSVMHVHLGQDATLSHARVQADSVHATALLRTDAVLARNAR 237
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 351
Y+ V++ G LSRH ++V+ G + +L++ +L+ + + + +RL ++H
Sbjct: 238 YQRVDLELGAGLSRHELNVRLEG--SNAQLTANGVLLGNGRRHVDTRLGIEH 287
>gi|424032173|ref|ZP_17771593.1| feS assembly protein SufD [Vibrio cholerae HENC-01]
gi|408876178|gb|EKM15307.1| feS assembly protein SufD [Vibrio cholerae HENC-01]
Length = 426
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 45/338 (13%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT--------DTSMIKSSQIQ 111
LP S P+ L ++ Q L+ P+R+ E +++T D S + + +
Sbjct: 12 LPFSDYLKPRLTALDEVAKYHWQAALAQGLPTRQHEDWKYTSLEGFDAIDFSSQRETDVS 71
Query: 112 PITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF 171
+ LD+ + LV ++G Q NLS++ + SLL +G K+
Sbjct: 72 MAFVQAHKLDMDAE----RLVFVNGQFQP---NLSDIDGEAFRLSLL---NGDAKQA--- 118
Query: 172 ISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPISNP 229
+ ++F + + +I V A V PIYL + +GG +++
Sbjct: 119 LPAAIAPEIFLHLTEAFSDTTLLIEVDAKHTVAKPIYLMQIESRPQGG--------MAHH 170
Query: 230 RVVVLVEEGGEVGIIEEFVGK-EGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
RV + V + EV I+E + GN ++ S L + + ++ H L S+ H
Sbjct: 171 RVHLKVGQSSEVKIVEHLLSACHGNRVAASYSGSRLTMEVSDNAELTHYKLCLGSVEHYH 230
Query: 287 IKWTAV---RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
+ R S + G+L+RH+ Q G +TE E++S L QT D
Sbjct: 231 FAHNDLFVGRDANVSSQTFL---LSGQLTRHHTSCQLNGENTEIEINSLALPSHQQTYD- 286
Query: 344 HSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+R L+H +G+C +QLHK I+A G+AVF+G +KV
Sbjct: 287 -TRTYLEHNKGHCTSQQLHK-IIASQQGKAVFNGMIKV 322
>gi|455739563|ref|YP_007505829.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
subsp. morganii KT]
gi|455421126|gb|AGG31456.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
subsp. morganii KT]
Length = 434
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 34/308 (11%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDG 136
Q T +P+ E + +T + + + Q T +L+V +A SL VL+DG
Sbjct: 46 QQAQKTGFPAFHQEDWHYTSLTPLLEADYQDKT---GTLNVLPEAVLTSLNAYRIVLVDG 102
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC---GDLFWSINGMGAPDLG 193
A S+ GV+ S V+D +EF G++F + A
Sbjct: 103 VF---APQWSDTDTGVFELS-----------VADRHNEFPAPVNGEIFLHLTESLAQTPL 148
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I V AG + E +Y+ +S + L + + R + + V +IE F+ +
Sbjct: 149 MIRVKAGAQAEKSLYIVNIST----AHNDSLNMRHSRYHLDIGVNAAVSVIEHFISPDEQ 204
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
++ + + +G+ RH L ++ A H + + E GGKL+R
Sbjct: 205 SAHFTGARMTANVGENSDFRHLKLGFENPQAYHFAHNDLVIAAHARVESTSFLLGGKLTR 264
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQA 371
H+ Q G ++S L + D +R L+H +GYC RQ HK IV + +A
Sbjct: 265 HHTSTQLNGEGIVLAMNSLVLPKHGEIAD--TRTYLEHNKGYCESRQRHKTIVMDN-SRA 321
Query: 372 VFDGNVKV 379
VF+G +KV
Sbjct: 322 VFNGMIKV 329
>gi|383765395|ref|YP_005444376.1| FeS cluster assembly protein SufD [Phycisphaera mikurensis NBRC
102666]
gi|381385663|dbj|BAM02479.1| FeS cluster assembly protein SufD [Phycisphaera mikurensis NBRC
102666]
Length = 445
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 29/324 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVSTDAQFPS- 130
L RD+ WP +++E +RFT+ + ++ + + S + Q P
Sbjct: 27 LNPFRDAGRARFKELGWPGKRNESWRFTNLDKLAATNFVSAVDDAEVSDEALASFQVPGL 86
Query: 131 ----LVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF------QCGD 179
LV +DG F + + L GV V L +++ I + D + + D
Sbjct: 87 DATLLVFVDGRFREELSDATGELEPGVLV---LPLTEAICQH-RDLVEPHLGRLTRETDD 142
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEG 238
F ++N + + V G P+++ ++ + G P+ S+PR +++
Sbjct: 143 AFTALNNASVENGVFVRVQDGVAASKPVHVLSIATDAGE------PVASHPRGLIIAGVA 196
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
V ++E V EG N+ E+ +V H +L+ A H+ ++
Sbjct: 197 SSVTVLEHAVAVEGAGVSLTNAATEIFAADRARVEHYFLERDGREAFHVASLFAHLGEST 256
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
+ V GG L R+NV G D E ++ L V D Q L + + + H C
Sbjct: 257 DVKSHTVLLGGSLVRNNVSPTLAGTDCECLING--LYVGDGHQHLDNVMRVHHAAQGCRS 314
Query: 357 RQLHKCIVAHSLGQAVFDGNVKVN 380
RQ +K I+ + + VF G + V+
Sbjct: 315 RQFYKGIL-NGESRGVFTGRIVVD 337
>gi|402850222|ref|ZP_10898431.1| Iron-sulfur cluster assembly protein SufD [Rhodovulum sp. PH10]
gi|402499521|gb|EJW11224.1| Iron-sulfur cluster assembly protein SufD [Rhodovulum sp. PH10]
Length = 448
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 32/308 (10%)
Query: 90 PSRKDEPFRFTDTS--MIKSSQIQP------ITRPSSSLDVSTDAQFPSLVLIDGFIQNS 141
P+R+ E +++TD M ++ + P + R + V LVLIDG +
Sbjct: 49 PNRRVEEWKYTDLRNLMREAKPLAPPVGPAGLVRAQGAGRVFAAVGVRRLVLIDGQFISE 108
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-----DLFWSINGMGAPDLGVIY 196
+L++L G+ +GSL ++ + +D ++ D+ +++N D VI
Sbjct: 109 LSDLADLEPGLSIGSL---AEALAANDTDVVARLGAKSPADKDVAFALNTAFMGDGLVIA 165
Query: 197 VPAGCKVENPIYLK--YLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
V G ++ PI+L Y E V ++ L + + E E G +G D
Sbjct: 166 VAPGMQIARPIHLVHCYTGEEAAAVFTRSLVTLGGGAGLTLLESHE--------GPDGID 217
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
Y ++ L++V+G G ++ + + A H+ T V + + +TGG +SR+
Sbjct: 218 -YQVDNALDIVVGDGARLERVKVGAEGDAALHVSTTVVVLGREVEFRDLLFTTGGAVSRN 276
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
V V+ GP T L LL Q D + L++DH G C R+ K ++ ++V
Sbjct: 277 QVFVRCDGPGTTLTLDGASLLKGRQHSD--ATLVVDHAIGGCKSRETFKAVL-DGESRSV 333
Query: 373 FDGNVKVN 380
F G V
Sbjct: 334 FQGKTVVR 341
>gi|333908821|ref|YP_004482407.1| FeS assembly protein SufD [Marinomonas posidonica IVIA-Po-181]
gi|333478827|gb|AEF55488.1| FeS assembly protein SufD [Marinomonas posidonica IVIA-Po-181]
Length = 419
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 140/311 (45%), Gaps = 23/311 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-DAQFPSLVLID 135
R + L +T WP+RK E +R+T ++ S + + R S V+ + LV ++
Sbjct: 23 RAQALDILANTQWPTRKTEAWRYTPLKAVERSSAKALDRVSGLTPVAIPNVSAIELVFVN 82
Query: 136 GFIQNSAL-NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWSINGMGAP 190
G Q AL + LP G+ V LG D ++ ++ + F LF +N + A
Sbjct: 83 G--QFDALQSTKTLPTGLTVQ--LG-QDLSSQQQAEALRSFSNVKPERHLFGLVNDVLAS 137
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
D+ ++ V K+ P+ + L G S+ RV+V +E+G ++ +IE+ V
Sbjct: 138 DVLLVTVAESIKIAEPLRISSLLSAGAE--------SHTRVLVRLEKGAQLAVIED-VQS 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
+G+ + + +E + + H Q+ + I + + S V G +
Sbjct: 189 QGDSL--STAFVEYDVAADASLEHYRFALQTGSNLTIGGSHFQLSDKSKMHSTIVGFGSE 246
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 370
LSR + + G + +L++ +LL + DLH+ + P G + + IVA +
Sbjct: 247 LSRLDTDIIHAGEFADAKLNAMYLLDGKELFDLHATVEHAMPNGTTEENVRGIVADR-AR 305
Query: 371 AVFDGNVKVNR 381
AVF+G + ++R
Sbjct: 306 AVFNGRIHIHR 316
>gi|160872499|ref|ZP_02062631.1| FeS assembly protein SufD [Rickettsiella grylli]
gi|159121298|gb|EDP46636.1| FeS assembly protein SufD [Rickettsiella grylli]
Length = 434
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 137/315 (43%), Gaps = 19/315 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS---QIQPITRPSSSLDVSTDAQFP 129
L +LR ++ + +PS+K +++T + + + + + P L+ + +
Sbjct: 34 LTRLRRTALDAFTTMGFPSKKQADWKYTSFNTLHQTPYFLVASSSPPDPVLEATIGVR-- 91
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSINGMG 188
LV ++GF + +L + L+ + + V ++ + F +N
Sbjct: 92 -LVFVNGFFAPHLSTVIDLAQNDRITHLIQMHHHHPELVKAHVNSNAVEKNSFTQLNTAF 150
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
+ IY+PA + PI + +++ + ++ +P+ N +++ EE I+E+++
Sbjct: 151 LREGAFIYLPANTCLNTPIDVLFINTD--ETPNRFIPLRN---IIIAEENSHATIVEKYI 205
Query: 249 G--KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 306
+ N Y+ NSV E + + H N+S A H+ +V Q+ S + +
Sbjct: 206 DMTSKKNTPYFTNSVTECYLSANSHIEHYQYINESQQAQHVGSLSVSQQENSQFSAYSFA 265
Query: 307 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 364
L R ++ V+ L P + +L +L Q D + ++DH P+ + +K I+
Sbjct: 266 LNSALIRRDIIVKLLAPQAQCQLKGLYLAFRHQQIDYCT--VIDHVSPKTQSDEFYKGII 323
Query: 365 AHSLGQAVFDGNVKV 379
+ +A F+G + V
Sbjct: 324 GDN-ARATFNGKLIV 337
>gi|388455287|ref|ZP_10137582.1| component of SufBCD complex [Fluoribacter dumoffii Tex-KL]
Length = 430
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 114/288 (39%), Gaps = 54/288 (18%)
Query: 58 DSLPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
D + ++ LP L +++ + L +P+ DE +++T + +P
Sbjct: 6 DFYQQQAKAICSALPWLAQMQTKALMDLHQHGFPTHHDENWKYTRVDALFKQTFKPSVEA 65
Query: 117 SSS-------LDVSTDAQFP---SLVLIDGFIQNSALNLSNLPDGV-------------- 152
SS D + A P +++ +G I LP+GV
Sbjct: 66 ESSKESASTRADEKSYADLPVKHKVLIQNGTILGVEQLAKALPEGVLILPLSVALIRHPE 125
Query: 153 ----YVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY 208
Y+G++L G + I CG IY+PAG +E PI
Sbjct: 126 LLKPYLGTILKQEHGFHYLNTAMI---HCGVF--------------IYIPAGTLIEEPIA 168
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
L + V ++ R +++ E + IIE++ G + CY N V EV++G
Sbjct: 169 LSH-------VQNQMQQAVYLRHLIIAEANSQATIIEDYQGS-ADCCYLTNKVTEVMVGT 220
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
G K+ H +Q +S A H+ +V+Q S + +S GG L R ++
Sbjct: 221 GAKLTHCTIQRESKAAFHLGHLSVKQLAHSEFANHSLSLGGHLVRSDI 268
>gi|92117849|ref|YP_577578.1| FeS assembly protein SufD [Nitrobacter hamburgensis X14]
gi|91800743|gb|ABE63118.1| Iron-regulated ABC transporter permease protein SufD [Nitrobacter
hamburgensis X14]
Length = 441
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 133/336 (39%), Gaps = 26/336 (7%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT--- 114
++ + S LP + R + + S P R+ E +++TD ++ +
Sbjct: 17 EAFAVACSRLPGAGKVAAARQKAFEAYESLGLPHRRVEDWKYTDLRVLMREVLPLAAAPD 76
Query: 115 -----RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
+ L + VL+DG ++ L DG+ S V + +
Sbjct: 77 QAALAKAGEILKAQSLGDAYRFVLVDGVFVPQLSDVGGLEDGLRARSFHEVLGTGTDQSA 136
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
D + D+ S+N D +I V + PI++ +++ S +
Sbjct: 137 DLFTTSATTDVMVSLNAAMTTDGVIIEVGDRISLTKPIHVVHVTTV-----SSASAFTRS 191
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
R+ + + V +IE FV + Y A+ L V +G G V H L + +A +I
Sbjct: 192 RLTI--GKAARVTLIESFVAADDAKSYQAHDALIVAVGDGADVAHIRLMADADDATNISS 249
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
V + L +++GG+LSR+ V G ++ + LL Q D+ L++
Sbjct: 250 AIVTVGGEAKLNLFSLTSGGRLSRYQVFATLEGEGSDVFFNGVSLLKDTQHADM--TLVV 307
Query: 350 DHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVN 380
DH +C R++ + +V AHS VF G + V
Sbjct: 308 DHAVPHCTSREVFRAVVDDRAHS----VFQGKIIVR 339
>gi|429740124|ref|ZP_19273832.1| FeS assembly protein SufD [Prevotella saccharolytica F0055]
gi|429154225|gb|EKX96967.1| FeS assembly protein SufD [Prevotella saccharolytica F0055]
Length = 446
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 147/345 (42%), Gaps = 62/345 (17%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
I L E + SS + + +RD++ + +PSRK E +R+TD
Sbjct: 8 IDLYERYRKVIFDHSSDI-----MNAVRDTAFEDFKRQGFPSRKVERYRYTD-------- 54
Query: 110 IQPITRPSSSLDVST-----------DAQFPSLVLIDGFIQNSALNLSN-----LPDGVY 153
IQ + P L+++ P+L + F+ N A N LPDGV
Sbjct: 55 IQEVFAPDYGLNLNRLDIPVNPYEAFKCDVPNLSTTNYFVVNDAFYKDNLPKATLPDGVI 114
Query: 154 VGSLLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
V SL V+ + +FI ++ D ++N M A D +YVP G KV+ I
Sbjct: 115 VDSLRDVA----VQNPNFIGKYYAKLAETNKDAVTALNTMLAQDGLFVYVPKGVKVDKTI 170
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW-ANSVLEVVI 266
+ +++ +VD + N RV+++VE EV + F +D ++ A V+E +
Sbjct: 171 --QVINILRSDVD----LMVNRRVLIVVEPDAEVKFL--FCDHAFDDRHFLATQVIEAYV 222
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELVEVSTGGKLSRHNVHVQQL 321
H+ L + H K T V +Q+ +S ++ ++R+ H+
Sbjct: 223 AD-----HACLDLYCMEETHEKSTRVSNVYIQQQASSRVNHNVITLHNGVTRNGTHLVFR 277
Query: 322 GPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 364
G LS +++D+ Q + + L+DH C ++L+K ++
Sbjct: 278 GEGATCNLSG--CVIADKNQHVDNHTLIDHAVPNCSSQELYKYVL 320
>gi|254447152|ref|ZP_05060619.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
gi|198263291|gb|EDY87569.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
Length = 439
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 147/339 (43%), Gaps = 44/339 (12%)
Query: 61 PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL 120
P+ +S+LP PL K RD ++ L + P+R+ E ++++ ++ QI TR ++
Sbjct: 17 PAHTSALPAPLA--KWRDEAAPHLSALTLPTRRTENWKYSYRALKLDDQIAQ-TRTNAPQ 73
Query: 121 DVSTDAQFPS------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
S D+ P LV+ +G+I SA S LP + LL S+ + D ++
Sbjct: 74 TDSADS-VPHHGLGYRLVIRNGWIDRSA---SRLPQQSGI-ELLAFSE-----LDDLQAQ 123
Query: 175 FQCGDL----------FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
G L +N D VI + G ++ P+YL G
Sbjct: 124 ALAGKLGSCLDAKTTQLAVLNQAHLADGLVIRLAKGAVLDQPLYLAIHGDAGA------- 176
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
S PR+ + E ++ ++EE+ EG D N+ +E+ + V L ++ ++
Sbjct: 177 --SYPRIWLEAAENSQIAVVEEY-SSEGADPTLTNAAVEMTLAANAHVNWVRLALEAEHS 233
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
HI T + E + GG+L RH++ V+ E +L+ + Q D H
Sbjct: 234 QHIGATGAVLAQHARLEHHHIGFGGQLRRHDLQVRLEESGAECKLNGVAVTQGRQHFDNH 293
Query: 345 SRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
+ +++H +C + ++ I A A+F+G + +++
Sbjct: 294 T--VIEHIAPHCNSEETYRNIAA-DRSHAIFNGRIHIHQ 329
>gi|126668347|ref|ZP_01739305.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
gi|126627163|gb|EAZ97802.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
Length = 428
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 140/321 (43%), Gaps = 25/321 (7%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD-VSTDAQF 128
P PL +LR L+ P P+RK E ++++ +K S + PS + S
Sbjct: 20 PGPLLELRKQKGTALVDMPLPTRKTENWKYS-VRHLKLSDELAVALPSLGKEGTSLSMAG 78
Query: 129 PSLVLIDGFIQNSALNLSNLPD--GVYVGSLLGVSD----GIMKRVSDFISEFQCGDLFW 182
+V +G + A S+ PD G+ + + D + +R+ + +
Sbjct: 79 YRVVFRNGVMVPEA---SDFPDFNGIRIQRFCDLDDQDAAALAERLDNTLDSQTVQ--MA 133
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N D I + ++ P+++ + V + + + PR+ V ++
Sbjct: 134 RLNSARFEDGLFIQLDKEAVLDQPLFIIH------EVTASSVGSAYPRIYVDAARHSQMT 187
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++EE++ G++ N+V E + +G ++ L + + HI T VRQ TAS +E
Sbjct: 188 LVEEYMSS-GSEPVMVNTVTEFFLAEGARITSVRLTLEGESVQHIGATGVRQATASRFES 246
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLH 360
V GG L RH++ V+ G E +L+ + Q D H+ ++H +C + +
Sbjct: 247 HCVGFGGPLRRHDLQVRLEGEGAECKLNGVVVTQGKQHYDNHTS--IEHIAAHCDSEETY 304
Query: 361 KCIVAHSLGQAVFDGNVKVNR 381
+ I A A+F+G + +++
Sbjct: 305 RNIAA-GQSHAIFNGRIHIHQ 324
>gi|372208922|ref|ZP_09496724.1| FeS assembly protein SufD [Flavobacteriaceae bacterium S85]
Length = 435
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 142/344 (41%), Gaps = 34/344 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
SL+D L ++ +Q + + +P+ KDE +++T + ++
Sbjct: 2 SLQDKLAAAFQENSTNAAVQNHKKEAFNAFAQQGFPTTKDEEWKYTSLRNVLKNEYG--I 59
Query: 115 RPSSSLDVSTDAQFP---------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
P+ + DVS + P L+ +DG Q + LS+ D V L S I
Sbjct: 60 APAKTADVSAKSIQPYLVSGVDSYKLIFVDGVFQET---LSDESDEFSVQLL---SKAIE 113
Query: 166 KRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE--------NPIYLKYLSVEGG 217
++ I + Q L ++ + DL + G ++ PI + YL+
Sbjct: 114 DSKNNEIFKQQYNSLAKGVSSL--SDLNTAFAQEGVLIQVAKSKVVSKPIEILYLA---- 167
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
+ +S L + PR ++L+ E + IE + + N V EV +GK +
Sbjct: 168 SGESSALLLQ-PRNLILIAENAQAKFIERHQSLT-DIATFNNVVTEVFVGKNAIFDLYKI 225
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
QN NA+ + T V QE + + S GGKL+R+N+ Q G E+ L+ +L
Sbjct: 226 QNDKENASLVDATLVAQEKDTVASVFTFSFGGKLTRNNLSFFQNGTGCESNLNGVTILEG 285
Query: 338 DQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DQ D H+ + P + +K I VF+G V V++
Sbjct: 286 DQLVDNHTLVAHKSPDCTSNETYKGIYGGK-ATGVFNGKVIVDQ 328
>gi|293396325|ref|ZP_06640603.1| FeS assembly protein SufD [Serratia odorifera DSM 4582]
gi|291421114|gb|EFE94365.1| FeS assembly protein SufD [Serratia odorifera DSM 4582]
Length = 428
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 136/310 (43%), Gaps = 29/310 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPIT-------RPSSSLDVSTDAQFPSLVL 133
Q L WP+RK E +++T + Q + PI R + +LD+ DA LV
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLERQFVAPIVSDITAAQRDALALDI--DAY--RLVF 91
Query: 134 IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLG 193
+DG + LS+ G Y + + + E ++F + A +
Sbjct: 92 VDG---RYSAQLSDADLGDYQFEVASYAS------PQTLPEPIQPEIFLHLTESLAQETS 142
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I +PAG P+YL L + G ++ ++ + R + + G + +IE +V
Sbjct: 143 LIRLPAGKVGVRPLYL--LHISSGRGEAGEINTVHHRHHLDIARGAQASVIEHYVSL-NE 199
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
++ + L +G +++HS L +S + H + + + G L+R
Sbjct: 200 RAHFTGARLTANVGDNAELQHSKLAFESQPSYHFSHNDLVIGRDARVKSDSFLLGAGLTR 259
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQA 371
HN Q G + ++S L + + D +R L+H +G+C RQLHK +V+ +A
Sbjct: 260 HNTSAQLNGEGSNLAINSLILPIGKEVCD--TRTYLEHNKGFCESRQLHKTVVS-DRAKA 316
Query: 372 VFDGNVKVNR 381
VF+G +KV +
Sbjct: 317 VFNGMIKVAK 326
>gi|167764128|ref|ZP_02436255.1| hypothetical protein BACSTE_02511 [Bacteroides stercoris ATCC
43183]
gi|167698244|gb|EDS14823.1| FeS assembly protein SufD [Bacteroides stercoris ATCC 43183]
Length = 447
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + ++++ P SL + D F
Sbjct: 42 FPTRKTEKYKYTDVSKFFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEMAEQRPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+V+ + N RV++++EEG + ++ + + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVNF----MVNRRVLIILEEGAQARLLACDHAMDSVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
A V+EV +G+ L+ + I VRQE S L ++ +R+
Sbjct: 214 ATQVVEVFVGENATFDFYELEETHTSTVRINSLYVRQEANSNVLLNGMTLHNGTTRNTTE 273
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + V+D+ Q + + +DH C
Sbjct: 274 VTLAGEGAELNLCG--MAVADKNQHVDNNTTIDHAVPNC 310
>gi|313680303|ref|YP_004058042.1| iron-regulated ABC transporter permease protein sufd [Oceanithermus
profundus DSM 14977]
gi|313153018|gb|ADR36869.1| Iron-regulated ABC transporter permease protein SufD [Oceanithermus
profundus DSM 14977]
Length = 441
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 145/348 (41%), Gaps = 54/348 (15%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS----MIKSSQIQP- 112
+SL S +P L R+ + + WP+RK+E +R+TD ++ + +P
Sbjct: 11 ESLRRRSKQRGEPAWLAAARERAWRIFERLDWPTRKNEAWRYTDLDPAWFALELEEARPA 70
Query: 113 -------ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
+ R +DA+ +LV DG + + L GV + L G +
Sbjct: 71 ELRQRDELPRAVRERLAESDAE-AALVFEDGRLVYAHLPAELGAKGVVLSDLAGALEDHG 129
Query: 166 KRVSDFIS-----------EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
+ V + E + L ++ G GA +YVPAG +E PI + + +
Sbjct: 130 EHVEGALYQAVTETGLQGPEDKLAALNAALWGYGA----FVYVPAGVTLEAPIGVFHYAA 185
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
G KL +S R ++++++ E IEE++ + + A E+++ G ++RH
Sbjct: 186 RPG-----KLSLS--RTLIVLDDNAEATFIEEYLSEAHARTHVATG--ELLLRPGARLRH 236
Query: 275 SYLQNQSLNAAHI-KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFH 333
+ +Q H + A+ + A +L V+ GG L+R V + +GP ++E+ +
Sbjct: 237 AGVQTWGAGVRHFHRQRALLERDAVLLDLA-VNLGGTLARTEVASELVGPGADSEMLGVY 295
Query: 334 LLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHS----LGQAVFDGNV 377
DQ LDH Y Q H A S G A +G V
Sbjct: 296 FAGRDQH--------LDH---YTTQHHVSAQARSDVYYKGAAAANGRV 332
>gi|116073823|ref|ZP_01471085.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
gi|116069128|gb|EAU74880.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
Length = 420
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 139/317 (43%), Gaps = 30/317 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ +++ L S PSR+ E +R TD + ++ + SS S A P
Sbjct: 27 LQPVQERGRNALASLGLPSRRQEDWRLTDLARLEGLFALALPSQPSSPQESGFADLPESP 86
Query: 131 ----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSING 186
+++DG + L +LP GV V L G + + + + C + W +
Sbjct: 87 ADGWRIVLDG--HSDPLATVSLPAGVSV--LRGAE--LEQALGHTLERCGCAE-AWPVEF 139
Query: 187 MGAPDLGVIYVPAGCKVENPI-YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
A V+ + ++ + L+ L V + +++ R+++LVEE E+ ++E
Sbjct: 140 NHALATQVLAL----RIRGSVPALEVL------VTASAASLASTRMLLLVEEKAELEVLE 189
Query: 246 EFVGKEGNDCYWANS-VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
G G+ A+S VLE+ +G+ +VRH + +A+ + AV QE S YE
Sbjct: 190 VIQGPAGS----AHSHVLELHLGQEARVRHGLVALGGGDASLLGHLAVEQEPRSTYEFTS 245
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 364
V+ G +L R V Q+ T L L +DQ H+ + + G QL K +
Sbjct: 246 VAKGWQLGRLEPRVVQVDGHASTVLKGLVLTDADQQFATHTAMRFEGEDGQLDQLQKSVA 305
Query: 365 AHSLGQAVFDGNVKVNR 381
A ++F+G V+V R
Sbjct: 306 A-GRSHSIFNGAVQVPR 321
>gi|254522712|ref|ZP_05134767.1| FeS assembly protein SufD [Stenotrophomonas sp. SKA14]
gi|219720303|gb|EED38828.1| FeS assembly protein SufD [Stenotrophomonas sp. SKA14]
Length = 420
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 144/320 (45%), Gaps = 16/320 (5%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVS 123
S+ Q R L P+ ++E +++T + ++ P+ P+ +
Sbjct: 7 SMAQAFCGSDARREVLDAALRDGLPAARNEAWKYTSLRQLERRAFAAAPLQGPALDATLL 66
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSDGIMKRVSDFISEF--QCGDL 180
D P LV ++G + + ++ LP GV + L ++DG + F+ + ++
Sbjct: 67 EDIPAPRLVFVNGRLDAALSDVQALPAGVQLQPLSAALADG--EDAVRFLGRRYERSEEI 124
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F +N A + V+ V G +V+ P+ L + SV G+ D + R ++ + G
Sbjct: 125 FARLNAALADEGVVLRVDEGVQVDVPLQLVFASV-AGDTDLAW----HHRHLIELRAGAS 179
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
+G++E G+ + N+VL + + G ++H+ +Q S T + Y
Sbjct: 180 LGVVEHRFSV-GDSAHLDNTVLHAHVARDGVLKHARVQASSARQTSFLRTDAVLARDAQY 238
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQL 359
V++ G LSRH ++V+ G + +L++ +L+ + + + +RL +DH R +L
Sbjct: 239 HRVDLELGAALSRHELNVRLEGDN--AQLTANGVLLGNGRRHVETRLGIDHIARDTACEL 296
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
VA + + VF G +++
Sbjct: 297 LWRGVAANRSRVVFHGGIQI 316
>gi|373109259|ref|ZP_09523538.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 10230]
gi|423129073|ref|ZP_17116748.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 12901]
gi|423132732|ref|ZP_17120379.1| FeS assembly protein SufD [Myroides odoratimimus CIP 101113]
gi|423328342|ref|ZP_17306149.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 3837]
gi|371645257|gb|EHO10783.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 10230]
gi|371649449|gb|EHO14927.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 12901]
gi|371649899|gb|EHO15374.1| FeS assembly protein SufD [Myroides odoratimimus CIP 101113]
gi|404604778|gb|EKB04394.1| FeS assembly protein SufD [Myroides odoratimimus CCUG 3837]
Length = 439
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 144/346 (41%), Gaps = 34/346 (9%)
Query: 56 LEDSLPSSSSSLPQPLP-----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
L+D L +S + Q L L +R + +T +P++K E +++T + I ++
Sbjct: 3 LKDKLITSFVAFEQGLKGEHEGLHDIRLEALKTFEDKGFPTKKVEAWKYTSLNSILKNEF 62
Query: 111 QPITRPSSSLDVS-------TDAQFPSLVLIDGFIQ-------NSALNLSNLPDGVYVGS 156
+ + + ++++ +D+ LV I+G + L++ + +
Sbjct: 63 RVLQKEETAIEYKDVKKYFLSDSDTYKLVFINGVFSSHLSSTTHDGLDVCLMSSALTKPK 122
Query: 157 LLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
V D +D D ++N A + I +P V PI + Y S
Sbjct: 123 YKMVIDAFYNNTAD------KTDSMTALNTAFATEGAFINIPKSKVVAKPIEIIYFST-- 174
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
V K L + PR +V+V E V I+E N N+V E+V K V
Sbjct: 175 --VADKALLVQ-PRNLVVVGENAHVQIVERHQNL-TNSTVLTNAVTEIVAHKRAIVDFYK 230
Query: 277 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 336
LQN + A + T + Q+ S + S GGKL R+N++ Q G ++ L L+
Sbjct: 231 LQNDNEEATLVDNTYITQKQESRVSVHTFSFGGKLIRNNLNFYQDGERIDSTLKGVTLIS 290
Query: 337 SDQTQDLHSRLLLDHPRGYCRQLHKCIV-AHSLGQAVFDGNVKVNR 381
Q D ++ + + P Q +K I +S G VF+G + V++
Sbjct: 291 DKQHVDHYTLVSHNQPNCESHQNYKGIYDGNSTG--VFNGKIYVDK 334
>gi|255534221|ref|YP_003094592.1| Iron-sulfur cluster assembly protein SufD [Flavobacteriaceae
bacterium 3519-10]
gi|255340417|gb|ACU06530.1| Iron-sulfur cluster assembly protein SufD [Flavobacteriaceae
bacterium 3519-10]
Length = 436
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 143/339 (42%), Gaps = 20/339 (5%)
Query: 55 SLEDSLPSSSSSLPQPLP---LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+L D++ S+ + + L L + R + Q L P++KDE +++T+ I
Sbjct: 2 ALLDNITSNHPAFLETLKHRFLDENRVFALQNFLQMGLPTKKDEEYKYTNLREITEKSYN 61
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ + ++ + F +V ++G + +S + + ++ ++D
Sbjct: 62 FFPKEAHNISKEKIEELHLGEENFDWIVFVNGVLHKELSKIS-IENVEFLSFNYALNDPK 120
Query: 165 MKRVSD-FISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
K V + + + DL F ++N + VP +E P+++ YLS N D
Sbjct: 121 HKEVFEHYFNTIAAKDLAFTNLNTAYCKQGFFLKVPKNVVIEKPVHVFYLS---QNQDEN 177
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
I N R +++ E G +V IIE + N+V E+ + K LQN S
Sbjct: 178 --TIYNTRNLLIAEAGSKVEIIESHHNFDET-FVLTNTVTEIFTYENAKADWHKLQNDSD 234
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
++ I T +QE S + + GGKL R+N+ G + + ++ ++ +Q D
Sbjct: 235 HSYMIDHTFAKQERDSRTTVNTFTFGGKLVRNNLDFIHNGENINSYMNGITIIGKEQLVD 294
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
H+ + P Q +K I VF+G V V++
Sbjct: 295 HHTAVHHKTPHCESYQNYKGIYKDK-SHGVFNGKVFVDK 332
>gi|88801810|ref|ZP_01117338.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
gi|88782468|gb|EAR13645.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
Length = 437
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 143/342 (41%), Gaps = 20/342 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + + + ++R + Q +P++K E +++T + I
Sbjct: 1 MELKDKLIASYVAFENDIDTSSDIHEIRSKAFQNFEGLGFPTKKLEAWKYTSLNSILKQD 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+S+ ++ D LV IDG + S+ LS + L+ +
Sbjct: 61 YSLFPNKENSIQLADVQKYFIHDIDTYKLVFIDG--KYSSF-LSETTHDTFDVCLMSSAL 117
Query: 163 GIMKR---VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K + ++ ++ D S+N A + IY+P +VE PI + ++ G
Sbjct: 118 AKPKYKAVIENYFNKIARKDNLTSLNTAFANEGAYIYIPRNVEVEKPIQI--INFTTG-- 173
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
S+ + PR +++VE+ V IIE N N+V E+ K V +QN
Sbjct: 174 -SEAATMLQPRNLIVVEQNAHVQIIERHQSLTSNPV-LTNAVTEIFAAKDATVDIYKIQN 231
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
A+ I + + Q++ S + S GG ++R+N++ Q G ++ L ++ Q
Sbjct: 232 DHKTASLIDNSYIEQKSNSVVSVHTFSFGGNITRNNLNFYQRGEHIDSILKGITIIEGKQ 291
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + P Q +K I VF+G V VN+
Sbjct: 292 HVDHHTMVQHIEPNCESHQDYKGIFDER-STGVFNGKVIVNK 332
>gi|316934378|ref|YP_004109360.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
gi|315602092|gb|ADU44627.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
Length = 437
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 141/339 (41%), Gaps = 25/339 (7%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQ 111
++ D+ ++ + LP L + R + P R+ E +++TD SM + +
Sbjct: 12 DTASDNFAAAGARLPVAGKLDETRRQALDVFQRIGLPHRRIEDWKYTDLRASMREVLPVA 71
Query: 112 P------ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
P + R ++ + A LVL+DG + +L+ L G+ + SL +
Sbjct: 72 PAPDASALVRAEAAAGLHAIAGVRRLVLVDGALAPGLSDLAGLEAGLSIRSLREA----L 127
Query: 166 KRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+ D + D ++N D VI V G + P+++ +++ G P
Sbjct: 128 QSGDDCVLSLDTADPMAALNTALMTDGVVIEVADGTTLARPLHILHIASGGA-------P 180
Query: 226 ISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
++ R + + + ++E +V EG Y + + +G ++ + + S A
Sbjct: 181 VAMFTRSRIALGKDAAATVVESYVAGEGAGSYQVHDAAVIAVGDYARLDYVRIVEDSREA 240
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
+I AV + + ++TGG +SR+ V G ++ E + +LL Q D
Sbjct: 241 FNITSAAVSVGAHAHFNAFGITTGGLVSRYQAVVTVAGSHSKVETNGVNLLNGKQHAD-- 298
Query: 345 SRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ L+++H P R+ + V G +VF G + V +
Sbjct: 299 TTLVMNHDVPDCVSREGFRA-VCDDRGHSVFQGRINVRQ 336
>gi|338740505|ref|YP_004677467.1| ABC transporter permease [Hyphomicrobium sp. MC1]
gi|337761068|emb|CCB66901.1| ABC transporter, permease; Fe-S cluster assembly protein
[Hyphomicrobium sp. MC1]
Length = 447
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 141/345 (40%), Gaps = 22/345 (6%)
Query: 47 PFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI- 105
P ++L ++ SSL + R+ + + + P R E +++TD +
Sbjct: 10 PMKTAAEQTLAKLFVATQSSLAGGPEISACREQAFRNFEAKGLPHRHIESWKYTDLRAVM 69
Query: 106 ---KSSQIQPIT----RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL 158
K P T R + + LV ++G ++ + G+ + SL
Sbjct: 70 REAKGLAQAPNTDIRRRAADACKALASVGSRRLVFVNGAFAAELSDVEAIEPGLKISSLA 129
Query: 159 -GVSDGIMKRVSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
+S+G V+ GD +S+N D VI V G + P++L +
Sbjct: 130 EALSNGNPSVVASIEGASPASGDAVFSLNTAFMQDGAVIDVAPGAVIARPLHLVFF---- 185
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
S++ + R ++ V +G + +IE G +G D Y N+ L++ IG G + H
Sbjct: 186 --YGSEEASATVTRSLLKVGDGARITLIESHEGPDGVD-YQCNNALDISIGAGACLDHVK 242
Query: 277 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 336
+ + + H+ V A+ Y ++ GG + R+ + V+ G + +L LL
Sbjct: 243 IISDGARSLHVDTLTVAVGKAATYRDFCLTIGGAVVRNQLFVRCTGSEASIDLRGASLLK 302
Query: 337 SDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
Q D + L+LDH C R++ K ++ + +F G + V
Sbjct: 303 GSQHAD--TTLVLDHAVANCQSREMFKSVLEDD-SRTIFQGKIIV 344
>gi|85710908|ref|ZP_01041969.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
gi|85695312|gb|EAQ33249.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
Length = 415
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 45/341 (13%)
Query: 49 VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS 108
VI+ A +++D L + L KL++ S WP R+ E +R+T +++
Sbjct: 8 VIERAAAVDDWLSPVRAE-----ALAKLKEQS--------WPGRRTEAWRYTSLHAVEN- 53
Query: 109 QIQPITRPSSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
++ P+ S + A+ P+ LV +DG + S L NLP+G+ + SL
Sbjct: 54 ----LSLPTES---NAQAEAPAIKGLDAIDLVFVDGRL-TSDLAALNLPEGLTIRSLTDK 105
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
SD I ++V F LF +N + A VI V A +E PI + ++ NV+
Sbjct: 106 SD-IAEQV--FTQVKPSHHLFGLVNDVLATQGIVIEVAANATIERPI--RVVNFATDNVE 160
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
S + RV+V + + + +IE G + E I ++ H
Sbjct: 161 S------HTRVLVSLGDNAKATVIEH---GSGTGHSLNTAFAEYDIADNARLEHYRFALH 211
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
A H+ + + S + G +L+R +V + G + ++ +LL +
Sbjct: 212 QGEAIHVGGSHFKLANKSRLNSTLIGYGSQLTRLDVDIIHAGEHAHAKFNNAYLLAPKEH 271
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
DLHS + P G + + I+ +AVF+G + ++R
Sbjct: 272 FDLHSTIEHAMPNGTTEENARGIIGDK-AKAVFNGRIHIHR 311
>gi|149369533|ref|ZP_01889385.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
gi|149356960|gb|EDM45515.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
Length = 437
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 33/340 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT--DTSMIKSSQIQP 112
+ ED+L + S PL LR ++ + +PS+K+E +++T ++ + K I P
Sbjct: 13 AFEDNLKADS-------PLYDLRSNALKVFEEKGFPSKKEENWKYTSLNSLLKKDYCISP 65
Query: 113 ITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
+ + ++ Q+ +V IDG + +S L+ DG+ V L D
Sbjct: 66 --KGDTDIEFKNVKQYFLHNVDTYKVVFIDG-VYSSYLS-ETTHDGIDVCLLSSAFDKSK 121
Query: 166 KR--VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
R + + ++ + +N + I++P + + PI + Y S GN +
Sbjct: 122 YRPVIESYFNKAAKKEGLTQLNTAFTKEGAFIHIPKNKEADKPIEIIYFST--GN---EA 176
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
PR +++ +E V IIE N N+V E+ K V + +QN +
Sbjct: 177 TLFVQPRNLIIADENAHVQIIERHQSLSSN-AVLTNAVTEIFADKRAMVDYYKIQNDTPE 235
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
A+ + T ++QE S + S GGK++R+N+ Q G ++ L+ ++ Q D
Sbjct: 236 ASLVDSTYIKQERESICSVHTFSFGGKITRNNLQFTQEGEYCDSILNGVTIIGDKQHVDH 295
Query: 344 HSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
++ L+ H C Q +K I S VF+G V V +
Sbjct: 296 NT--LVHHIAENCESHQDYKGIFDDS-STGVFNGKVYVEK 332
>gi|367477660|ref|ZP_09477007.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
gi|365270110|emb|CCD89475.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
Length = 440
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 139/342 (40%), Gaps = 33/342 (9%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + +R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGAGKVADVRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLDVSTDAQF--------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
P ++ A LVL+DG + +L+ LP GV V +L V D
Sbjct: 69 PLAGAPDAAALAKAKAAIALVAIDGAAKLVLVDGVVAAELSDLAALPAGVTVRTLRAVLD 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ + D S+N A D V+ V G ++ P++L +++ SK
Sbjct: 129 EASNESRGDLLLTKATDPMLSLNAALATDGVVVTVADGAQLSAPLHLIHVATT-----SK 183
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
S R V V +G ++E + +G Y AN + +G G ++ H L +
Sbjct: 184 AARYS--RSHVKVGQGARATLVETSIAADGVAAYQANDTGVIWVGDGAQLSHIRLMRDAA 241
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
+A +I S L +++GG +SR G +E ++ +LL Q D
Sbjct: 242 DAVNISSELFTVGAKSKLSLFNMTSGGAVSRLQAFFTLAGESSELIVNGVNLLRDKQHGD 301
Query: 343 LHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKV 379
+ L++DH C R+ + ++ AHS VF G + V
Sbjct: 302 MT--LVVDHAVPGCTSRENFRAVLDDRAHS----VFQGRIIV 337
>gi|374290115|ref|YP_005037168.1| FeS assembly protein SufD [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358376907|gb|AEU09095.1| FeS assembly protein SufD [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 432
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 151/341 (44%), Gaps = 27/341 (7%)
Query: 56 LEDSLPSSSSSL---PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
L+D + SS S L + L KLR S +PS K+E +R T+ + I + +
Sbjct: 3 LKDKIISSFSELNSSEEDSYLSKLRYQSINLFKKNGFPSSKNEEWRETNINSILNQDYKI 62
Query: 113 ITRPSSSLDVSTDAQFPSL--------VLIDGFIQNSALNLSNLPDGVYVGSLL-GVSDG 163
++ +L+ + L V IDG LS+ + +L +S
Sbjct: 63 FSKRKKNLEYQKIEKMVFLKEKNSFILVFIDG---EYNFYLSHKYNNEKKNIILSNISSQ 119
Query: 164 IMKRVSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+++ F + + D F S+N + + D G IY+P ++ PI + L + G ++SK
Sbjct: 120 KEEKIKKFYGKLLRKYDAFNSLNTIFSNDGGYIYIPNNVYLKTPIEI--LHIYTG-LESK 176
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
L NPR +++V + +V IIE + + ++NSV E+ ++ + +Q+
Sbjct: 177 ILL--NPRNLIIVGKSSKVKIIEHHKSLKKH-LLFSNSVSEIYALDNSEIEYYKIQDDIK 233
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
I T ++Q S + S G R+N++ G +T + L LL Q D
Sbjct: 234 GDNLIDNTFIQQNLYSKCSVHIFSFQGNFIRNNLNFYSNGENTSSLLYGISLLSGKQLID 293
Query: 343 LHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
H+ L+DH Y QL+K I+ + +F+G + V +
Sbjct: 294 HHT--LIDHLYSNSYSFQLYKSILLEK-SKNIFNGKILVEK 331
>gi|372273879|ref|ZP_09509915.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea sp. SL1_M5]
gi|390433784|ref|ZP_10222322.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea agglomerans
IG1]
Length = 426
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 24/305 (7%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI----QPITRPSSSLD-VSTDAQFPSLVLIDG 136
Q L+ P+RK E +++T + S Q P T + +D ++ LV +DG
Sbjct: 35 QQLMRVGLPTRKHENWKYTPLDTLLSQQFVLPDAPQTLSAEQVDALALPLDAIRLVYVDG 94
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIY 196
Q A + + L V + + Q ++F + A ++ +
Sbjct: 95 QFQ-PAFSSRDC-------ELFEVQHSVAAERRPLPAAVQP-EVFLHLTESLAEEVTTLR 145
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY 256
+ G P+YL L + G + + R + +EE E +IE +V + +
Sbjct: 146 LARGKSAARPVYL--LHITSGQ--QTGMNTVHYRHHLQLEESAEAEVIEHYVSLD-ERAH 200
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
+ + +G K+ H+ L +S + H + G LSRHN
Sbjct: 201 FTGTRFTFAVGDNAKLTHTKLAFESSASYHFAHNDLVIGNDGQVSSTSFLLGAGLSRHNT 260
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 374
Q G +T ++S L V + D +R L+H +GYC RQ+HK IV G+AVF+
Sbjct: 261 STQLNGENTTLAINSLVLPVKQEVAD--TRTYLEHNKGYCVSRQMHKTIV-RDKGRAVFN 317
Query: 375 GNVKV 379
G++KV
Sbjct: 318 GHIKV 322
>gi|89889830|ref|ZP_01201341.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
gi|89518103|gb|EAS20759.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
Length = 437
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 148/346 (42%), Gaps = 34/346 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQ----KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
S +D + SS +L + + +LR+ + + P RK+E +++T + +
Sbjct: 2 SFKDKILSSFIALENEVDTETYAHQLRNEALASFEELGIPQRKEEAYKYTSLKSLFNKDY 61
Query: 111 QPITRPSSSLDV---------STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
+ S+++ DA ++ IDG + +LS + L+ +
Sbjct: 62 SLFPKKESAIEYGDIKPYLIHQIDAY--RVIFIDGIYSS---HLSETTHDKFDVCLMSSA 116
Query: 162 DGIMKR---VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
K + + ++ D S+N A + I + VE PI + Y S GN
Sbjct: 117 LNNPKYSPVIEAYYNKLAPKDGLTSLNTAFAREGAYISIGKNTAVEKPIEVVYFST--GN 174
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ ++ PR +V+V E +V IIE N NSV E+ K V + +Q
Sbjct: 175 ---ESTLMTQPRNLVVVGENSQVQIIERHQSLSDNQV-LTNSVTEIFADKRAMVDYYKIQ 230
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
N LNA+ I T+V Q++ S L S GG L+R+N++ Q G + L+ ++
Sbjct: 231 NDHLNASLIDHTSVEQKSDSEVRLHTFSFGGALTRNNLNFYQRGEHCNSILNGVTIIEGK 290
Query: 339 QTQDLHSRLLLDHPRGYC---RQLHKCIVAHSLGQAVFDGNVKVNR 381
Q D HS L+ H C +Q + ++G VF+G V V++
Sbjct: 291 QHVD-HST-LVHHTAPNCESYQQYKQIFDDKAVG--VFNGKVLVDK 332
>gi|374374430|ref|ZP_09632089.1| Iron-regulated ABC transporter permease protein SufD [Niabella soli
DSM 19437]
gi|373233872|gb|EHP53666.1| Iron-regulated ABC transporter permease protein SufD [Niabella soli
DSM 19437]
Length = 434
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 138/328 (42%), Gaps = 39/328 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-----------TSMIKSSQIQPITRPSSSLD 121
L+ LRD + T P+ K E +++T T+ IK Q Q L
Sbjct: 23 LKTLRDGAFNAFEQTGIPTIKHEEWKYTRINDFFNKDYHFTTDIKEKQFQAAELKPFLLP 82
Query: 122 VSTDAQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD 179
+A +V I+G ++S L L ++ +S+ + + + +
Sbjct: 83 GHEEANV--IVFINGHYHPEHSVLRSEELE-------IISLSEAAQNQYAAIVEQHLGHS 133
Query: 180 LFWSINGMGAPDLGVI------YVPAGCKVENPIYLKYLS-VEGGNVDSKKLPISNPRVV 232
+ +G+ A + I ++ G V +P+Y+ ++ GN+ + PR +
Sbjct: 134 ADYHKDGINALNTAFIQEGVFVHIQKGKTVNHPVYIYNVTDARSGNI------FAQPRAL 187
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
V V E +V ++E F G D + N V E+V+ +G + +QN + N+ + T V
Sbjct: 188 VHVGENAQVEMLETF-ATVGADESFTNQVFEIVVEEGAVLNLCKIQNDAPNSTIVSTTHV 246
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
Q S +V +S G L R+N+++ P E L+ +L D H+ + P
Sbjct: 247 HQVGKSVANVVTISLSGGLVRNNLNMVMSAPRCEANLTGLYLQNGHTHVDNHTVVDNRQP 306
Query: 353 RGYCRQLHKCIV-AHSLGQAVFDGNVKV 379
+L+K I+ HS G VF+G + V
Sbjct: 307 NCLSNELYKGIMDGHSTG--VFNGKIFV 332
>gi|386819500|ref|ZP_10106716.1| FeS assembly protein SufD [Joostella marina DSM 19592]
gi|386424606|gb|EIJ38436.1| FeS assembly protein SufD [Joostella marina DSM 19592]
Length = 438
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 146/343 (42%), Gaps = 21/343 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + + P+ +R + + +P++KDE +++T + +
Sbjct: 1 MELKDKLISSFMAFENRVDVEHPVHDIRTEAIKFFEEKGFPTKKDEAWKYTSLKTLLKND 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLP--DGVYVGSLLGV 160
+ S+L+ D +V IDG I +S L+ ++ D + S L
Sbjct: 61 YSVFPKEESALEFKDVKKYFIHDIDSYKIVFIDG-IYSSHLSQTSHEGLDVCLMSSALSK 119
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ + F + D S+N + + I +P G V+ PI + +L+ G
Sbjct: 120 PKYQLIIENYFNKIAKTDDSLTSLNTAFSREGAFINIPKGKVVDKPIQIIHLAT--GKES 177
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
S L PR +V+V E V IIE N N+V E+ K G V + +QN
Sbjct: 178 SIML---QPRSLVVVGENAHVQIIERHQSLTDNPV-LTNAVTEIFTHKRGIVDYYKIQND 233
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ NA+ I T + Q+ S + S GGK++R+N+ G + L + +++
Sbjct: 234 NPNASLIDNTYISQQQNSHASVHTFSFGGKITRNNLQFVHKGEHINSTLKG--ITITEDK 291
Query: 341 QDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
Q + L+ H C Q +K I + S VF+G + V +
Sbjct: 292 QHVDHSTLVHHATPNCESHQDYKGIYSDS-STGVFNGRIIVEK 333
>gi|386717492|ref|YP_006183818.1| Iron-sulfur cluster assembly protein SufD [Stenotrophomonas
maltophilia D457]
gi|384077054|emb|CCH11640.1| Iron-sulfur cluster assembly protein SufD [Stenotrophomonas
maltophilia D457]
Length = 413
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 133/299 (44%), Gaps = 12/299 (4%)
Query: 85 LSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA 142
L P+ ++E +++T + ++ P+ P+ + D P LV ++G + +
Sbjct: 19 LRDGLPAARNEAWKYTSLRQLERRAFAAAPLQGPALDAALLDDIPAPRLVFVNGRLDAAL 78
Query: 143 LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVPAGC 201
++ LP GV + L V ++ ++F +N A + V+ V G
Sbjct: 79 SDVQALPSGVQLQPLSAALAAGEDAVRFLGRRYERSEEIFARLNAALADEGVVLRVDEGV 138
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSV 261
+VE P+ L + SV G + + R ++ + G +G++E G+ + N+V
Sbjct: 139 QVETPLQLVFASVAG-----EADLAWHHRHLIELRAGASLGVVEHRFSV-GDSAHLDNTV 192
Query: 262 LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQL 321
L + + G ++H+ +Q S T + Y V++ G LSRH ++V+
Sbjct: 193 LHAHVARDGVLKHARVQAGSARQTSFLRTDAVLARDAQYHRVDLELGAALSRHELNVRLE 252
Query: 322 GPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
G + L++ +L+ + + + +RL +DH R +L VA + + VF G +++
Sbjct: 253 GDN--ARLTANGVLLGNGRRHVETRLGIDHIARDTSCELLWRGVAANRSRVVFHGGIQI 309
>gi|255532926|ref|YP_003093298.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
gi|255345910|gb|ACU05236.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
Length = 436
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 26/260 (10%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV--------SDFISEFQCGDLFW 182
LV ++G + N+ + + V L + G K + S +I D
Sbjct: 90 LVFVNGHFNTALSNIRSSETELTVQPLTEAAQGTYKTIVAAHLNKSSTYIK-----DGVH 144
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEV 241
++NG +Y+ G E+P+Y+ ++ +D + I + PR +V V+E +
Sbjct: 145 ALNGAFIAGGVFVYLHKGKLPEHPLYIYHI------LDGRAEHILAQPRSLVYVDESSTL 198
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
+ E + +D + N V+E+V+ K V + +QN NA+ + T + Q S
Sbjct: 199 KLTEVYASVGTSDTF-CNEVMELVVEKNAYVEYYKIQNDRANASQVSTTHITQIGRSYVH 257
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 359
V ++ G + R+N+++ P E L +LL D H+ L+D+ + C Q
Sbjct: 258 TVTITLSGNIVRNNMNLVLDAPGNEAHLYGLYLLKGKTHADNHT--LIDNRQANCFSNQF 315
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
+K I A AVF+G + V
Sbjct: 316 YKGIAA-DFSTAVFNGRIMV 334
>gi|170768723|ref|ZP_02903176.1| FeS assembly protein SufD [Escherichia albertii TW07627]
gi|170122271|gb|EDS91202.1| FeS assembly protein SufD [Escherichia albertii TW07627]
Length = 423
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 142/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHEHWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + +SD I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGLSDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
L + + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RLTINVAANAHLQHVKLAFENPVSHHFAHNDMLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|78484926|ref|YP_390851.1| FeS assembly protein SufD [Thiomicrospira crunogena XCL-2]
gi|78363212|gb|ABB41177.1| Iron-regulated ABC transporter permease protein SufD
[Thiomicrospira crunogena XCL-2]
Length = 434
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 31/339 (9%)
Query: 53 AESLEDSLPSSSSSLPQPLPLQKL---RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
A L D L + S L + + L R ++ + LLS P+RKDE +++T + S
Sbjct: 13 ARQLLDQLVAESQRLNEQTEAEALIEKRQAAQERLLSLGLPTRKDEDWQYTSLIPMLSHA 72
Query: 110 IQPITRPSSSLDVSTDAQF------PSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSD 162
+ +P+ ++ + F L +DG F + + +PD + + + +D
Sbjct: 73 FE--IKPAKAIMLDDIQSFLPEFDTIRLTFVDGVFSEELSSGFDFIPDALSIE--MADAD 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
I I+ + D F +N M I + G + P+++ NV ++
Sbjct: 129 AIQS-----INLEEQADAFQLMNEMLLDQGLTISLEKGEALAVPVHIL-------NVQTQ 176
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
N R V + E E+ +++FV E N V +V + + + LQ+ +
Sbjct: 177 SEQWVNLRTQVELAENSEMMFLQQFVSLESGCSALVNDVAKVTVADHARFKQIVLQDMNP 236
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
+ + Q ++S E + G ++SRH ++ LG +E+ +S L Q D
Sbjct: 237 ESFYFANQFFEQSSSSVIETNYIGLGCEISRHQNYLMMLGEHSESMQNSIGLGTGKQIID 296
Query: 343 LHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
SR H +C RQLHK +V + VF+G + V
Sbjct: 297 --SRTSTTHQAAHCNSRQLHK-LVLDDQSRGVFNGMIHV 332
>gi|260772564|ref|ZP_05881480.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
gi|260611703|gb|EEX36906.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
Length = 419
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 17/312 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L +R + L T WP+R+ E +R+T S ++ ++ P + ++ +++ A +
Sbjct: 19 LSPVRQQALNALRQTRWPTRRTEAWRYTSLSCLEQLELSPKS-DNAPFNLAPIAGLETID 77
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV +DG +Q + L+ NLP GV + S + +D VS F LF +N + A
Sbjct: 78 LVFVDGQLQ-TDLSALNLPQGVSIYSAQSLPADQQAAAVSRFSQVKPSRHLFGMVNDVLA 136
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
++ I V C PI + + + G ++ RV V + G++ +IE G
Sbjct: 137 DNVLFIDVDPECHCTTPIRIVHHNHHGYE--------AHYRVQVNLGHHGKLTLIEHAQG 188
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
N E ++ ++ H S A + T + + G
Sbjct: 189 SGDN---LRTGFTECLLDTHAELEHYQFLINSPQALYFGGTHFSLNDHAQLNSTVIGFGS 245
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
+LSR +V + G E ++++ +LL + D+HS + P G + + IV
Sbjct: 246 QLSRLDVDIIHSGEHAEAKMNAVYLLGESEHFDMHSTIEHAKPNGTSEENVRGIVGDK-A 304
Query: 370 QAVFDGNVKVNR 381
AVF+G + ++R
Sbjct: 305 TAVFNGRIHIHR 316
>gi|352086371|ref|ZP_08953912.1| FeS assembly protein SufD [Rhodanobacter sp. 2APBS1]
gi|351679670|gb|EHA62807.1| FeS assembly protein SufD [Rhodanobacter sp. 2APBS1]
Length = 439
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 27/284 (9%)
Query: 59 SLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
SLP ++S L PLP L + R + P + E +++T + +
Sbjct: 6 SLPLAASLLDAPLPASGIAWLDEARRENRAAFAVGGLPGARVEAWKYTALRGLGQRRFAA 65
Query: 113 ITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSDGI 164
+++ DV A+F P LV ++G + L LPDG+ + L L + D
Sbjct: 66 GDAGAATRDVDA-AEFALPGVGGPRLVFVNGVFRADLSALEALPDGLSLQPLALALRDDA 124
Query: 165 ------MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ R + + GD F +N A D V+ V A + P+ L ++ G
Sbjct: 125 EPLRFALSRPALVGHVREGGDAFVQVNAASAADGVVLKVAAHATIAVPVQLVFV---GAA 181
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+S+ + R ++ + EG + ++E VG G A V +V + +G ++ ++ LQ
Sbjct: 182 AESEL--AWHARNLIELGEGASLALVEHHVG-HGEQAQLATLVGDVELHEGAQLHYTVLQ 238
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
N + A I+ + +R + L + GG L RH++ + +G
Sbjct: 239 NTATGAHLIRRSGLRLHARAQMRLHVLELGGALVRHDLQAELVG 282
>gi|209545424|ref|YP_002277653.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
gi|209533101|gb|ACI53038.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
Length = 430
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 128/317 (40%), Gaps = 37/317 (11%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI-TRPS----------SSLDVSTD 125
RD ++ L ++ P E +++T + RP + + + D
Sbjct: 37 RDRAAALLRASGLPRTGVEAWKYTSLRALADIPFAAAPARPDMAAVHAIVAEAEREFALD 96
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
A P V++DG + LS LPDGV V L D + + D+ ++N
Sbjct: 97 ADLPRAVVVDGRFDAA---LSRLPDGVTVTRLTA---------RDELPPYD--DVATALN 142
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
+ A D V++V G + L DS L + +PR +++++G + +++
Sbjct: 143 TLLADDGLVLHVGPGVDAGRMLLLSVTVA-----DSAPLSV-HPRHRIVLDQGARLSVLD 196
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
VG+ Y N V ++ + + H+ LQ + A H+ + Y+ +
Sbjct: 197 LAVGR---GAYLHNPVFDITVADNAALIHAKLQAEDPAAQHLAVIHAEVGAGASYDSFTL 253
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 365
+ G L+RH VH + ++ LL Q DL S + P RQ K +++
Sbjct: 254 TLGASLARHEVHARLAAEGGIVHVNGAQLLDGRQVADLTSVITHAAPACNSRQTVKNVLS 313
Query: 366 -HSLGQAVFDGNVKVNR 381
H+ G VF G + V R
Sbjct: 314 GHARG--VFQGKILVER 328
>gi|221632407|ref|YP_002521628.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
gi|221156953|gb|ACM06080.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
Length = 445
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 143/334 (42%), Gaps = 34/334 (10%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT-----------R 115
L +P L++ R ++ + TP PSR DE +R TD + Q+ P
Sbjct: 24 LDEPAWLRERRLAAWEIYERTPMPSRTDEEWRRTDIRRLPIDQVVPFAGVGQRVSGPDVL 83
Query: 116 PSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG---IMKRVSD 170
PS+ ++ DA S LV +D + + L+ +GV LL + +++RV
Sbjct: 84 PSALFEILGDAALRSGLLVQVDSSVVFTQLDPQLAAEGVVFTDLLTAARDMPELLQRV-- 141
Query: 171 FISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIY-LKYLSVEGGNVDSKKLPIS 227
F++E + F +++G +YVP G +V P+ + G + + L ++
Sbjct: 142 FMTEAVKPEDNKFAALHGAFWSGGTFLYVPEGVEVALPLRSFVWAETPGSAIFAHTLLVA 201
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN--QSLNAA 285
P G V +I+ + + A++V+E++ G+G +VR+ LQ+ +S+
Sbjct: 202 EP--------GASVVLIDTWASPTVEEPLIASNVVEIITGEGAQVRYIQLQDWGRSVWNF 253
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
+ +RQ+ + VS G +LS+ + +GP E+ + Q D +
Sbjct: 254 TTQRALLRQDVT--VNTLNVSLGSRLSKAFIASNLVGPGATAEMLGLYFADDAQHLDHQT 311
Query: 346 RLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
R P L+K + + VF G +KV
Sbjct: 312 RQWHVAPYASSDLLYKGALKDR-ARTVFSGLIKV 344
>gi|443243238|ref|YP_007376463.1| ABC-type transport system involved in Fe-S cluster assembly
[Nonlabens dokdonensis DSW-6]
gi|442800637|gb|AGC76442.1| ABC-type transport system involved in Fe-S cluster assembly
[Nonlabens dokdonensis DSW-6]
Length = 437
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 144/346 (41%), Gaps = 34/346 (9%)
Query: 55 SLEDSLPSSSSSLPQPLP----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
S +D + SS +L + + LR + P RK+E +++T + + +
Sbjct: 2 SFKDHILSSFIALENEVDTNSYVHNLRSEAINEFEKLGIPQRKEETYKYTSLKSVFNKEY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLP--DGVYVGSLLGVS 161
+ S++ S ++ ++ IDG I +S L+ + D + S L
Sbjct: 62 SLFPKKESAISYSDIKKYLVHQIDSYRVIFIDG-IYSSHLSQTTHDKFDVCLMSSALN-- 118
Query: 162 DGIMKRVSDFISEF----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
+ SD I E+ D S+N A + I + VE PI + Y S G
Sbjct: 119 ---NPKYSDVIKEYYNRLAVKDGLVSLNTAFAKEGAYINIGKNIVVEKPIEIVYFST--G 173
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
N D ++ PR +V+ E +V IIE N NSV E+ K V +
Sbjct: 174 NEDQ---LMTQPRNLVVAGENSQVQIIERHQSLSDN-AVLTNSVTEIFSAKRALVDWYKI 229
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
QN L+A+ I T V Q+ S + S GGKL+R+N++ Q G + L+ ++
Sbjct: 230 QNDHLSASLIDHTFVEQKDNSEVRIHTFSFGGKLTRNNLNFYQRGEHCNSVLNGVTIIEG 289
Query: 338 DQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
Q D HS L+ H C Q +K I VF+G V V++
Sbjct: 290 KQHVD-HST-LVHHTAPNCESFQEYKQIFDER-AVGVFNGKVLVDK 332
>gi|387907352|ref|YP_006337688.1| FeS assembly protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582245|gb|AFJ91023.1| FeS assembly protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 430
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 27/306 (8%)
Query: 85 LSTPWPSRKDEPFRFTDTSMIKSS-QIQPITRPS-SSLDVSTDAQFPSLVLIDGFIQNSA 142
++ W + E D +I ++ +I+ I R L + L+ IDG
Sbjct: 42 INEEWKNTDIESIINQDYDLIYNNVKIESIEREKVEELTFLKKEKSLILIFIDGKYN--- 98
Query: 143 LNLSNLPDGVYVGS----LLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGAPDLGVIYV 197
PD YV + L ++ + +F + C D F+++N + + D IY+
Sbjct: 99 ------PDLSYVHAENIILSNIASLKDNEIRNFYGKLSCKYDAFYTLNTIFSKDGAYIYI 152
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P +ENPI + ++S ++SK + N R ++++ E V IIE + + +
Sbjct: 153 PNNVILENPIEILHIST---GIESKIML--NNRNLIVIGEHSSVKIIEHYKCLRKHFA-F 206
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
NSV E+ + + +QN + + I T ++Q+ S + S G R+N++
Sbjct: 207 INSVSEIYAMDCSVIDYYKIQNDLVETSIIDNTFLKQKNNSKCTVYTFSLQGNFIRNNLN 266
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDG 375
G T + L +L Q D H+ L+DH Y QL+K I+ + +F+G
Sbjct: 267 FYSNGKKTYSYLYGISILSGKQLVDHHT--LIDHLCSDSYSFQLYKNILCEK-SKGIFNG 323
Query: 376 NVKVNR 381
+ VN
Sbjct: 324 KIIVNE 329
>gi|381186652|ref|ZP_09894222.1| iron-sulfur cluster assembly protein SufD [Flavobacterium frigoris
PS1]
gi|379651496|gb|EIA10061.1| iron-sulfur cluster assembly protein SufD [Flavobacterium frigoris
PS1]
Length = 438
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 142/342 (41%), Gaps = 19/342 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + + L +R S+ + + +P++KDE +++T + I +
Sbjct: 1 MDLKEKLVSSFMAFEERIDVHSELHDVRTSAIKNFENKGFPTKKDEAWKYTSLNAILKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ S++ S ++ +V IDG + +S L+ S +G+ V + ++
Sbjct: 61 FTVFPKTESNIQYSDVQKYFLHEVDTYKVVFIDG-VFSSHLS-STTHEGIDVCLMASALT 118
Query: 162 DGIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K V D F D S+N A + I +P + PI + Y S
Sbjct: 119 KPKYKMVIDTYFNQIANKDDSLTSLNTAFAIEGAYINIPKSKVADKPIEIMYFST----- 173
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
S+ ++ PR +V+V E V IIE N NSV E+ K V +QN
Sbjct: 174 GSEAALMTQPRNLVIVGENSHVQIIERHQSLNDNPV-LTNSVTEIFAQKRAIVDFYKIQN 232
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+L A I T V Q+ S + S GG ++R+N++ G + L+ ++ Q
Sbjct: 233 DNLTANLIDNTYVSQKQESHVSVHTFSFGGNITRNNLNFYHFGERLTSTLNGITIIGEKQ 292
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K I + VF+G V V R
Sbjct: 293 HVDHYTLVKHSTPNCESFQDYKGIYS-DRSTGVFNGKVYVER 333
>gi|281422602|ref|ZP_06253601.1| FeS assembly protein SufD [Prevotella copri DSM 18205]
gi|281403272|gb|EFB33952.1| FeS assembly protein SufD [Prevotella copri DSM 18205]
Length = 449
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 38/322 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-------KSSQIQPITRPSSSL--DVS 123
L +RD++ + +PSRK E +++TD S I ++++ P + DV
Sbjct: 28 LNAVRDAAFEDFRRLGFPSRKIERYKYTDMSAIFEPDYGLNLNRLEIPVDPYEAFRCDVP 87
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG----- 178
+ V+ D F N AL LP+GV V SL + I +FI ++
Sbjct: 88 NLSTSLYFVVNDAFY-NKALPKVELPEGVIVDSL----NKIAAENPEFIGKYYAKIAKTD 142
Query: 179 -DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
D ++N A D +IYVP KVE I + +++ +VD + N RV++++E
Sbjct: 143 EDGITALNTFLAQDGLLIYVPKNVKVERTI--QVINILRSDVD----LMVNRRVLIVMEP 196
Query: 238 GGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
G E + F +D + A V+E +G+ + L+ + + + Q+
Sbjct: 197 GAEAKFL--FCDHAADDKNFLATQVIEAFVGENASLDLYCLEETHYKNSRVSNVYIEQQA 254
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
S ++ ++R+ + + G E + +++D+ Q + + L+DH G+C
Sbjct: 255 NSRVNHNVITLHNGITRNRLDLVFKGEGAECFCNG--CVIADKNQVVDNNTLIDHQVGHC 312
Query: 357 RQLHKCIVAHSLGQAVFDGNVK 378
++ L + V DG +
Sbjct: 313 -------TSNELYKYVLDGEAR 327
>gi|398791540|ref|ZP_10552264.1| FeS assembly protein SufD [Pantoea sp. YR343]
gi|398215031|gb|EJN01598.1| FeS assembly protein SufD [Pantoea sp. YR343]
Length = 425
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QP---ITRPSSSLDVSTDAQFPSLVLID 135
Q L+ P+RK E +++T + + Q QP +L + DA LV ID
Sbjct: 35 QQLMRVGLPTRKHENWKYTPLDGLLAQQFVLPQPQEVSAEQVEALALPVDA--VRLVFID 92
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G Q LS+ G L + + Q ++F + A + I
Sbjct: 93 GRFQ---AELSSRDTG-----LFEIQHAQASERRPLPAPIQP-EVFLHLTESLAEEATTI 143
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND- 254
+ G P+YL +++ G + + + + R + +E E +IE +V ND
Sbjct: 144 RLARGKSAAKPLYLLHIT-SGQDAGTNTV---HHRHHLQLEASAEAEVIEHYVTL--NDV 197
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++ + + K++H L +S A H V + G LSRH
Sbjct: 198 AHFTGARFTFDVADNAKLQHIKLSFESEKAYHFAHNDVVMGRDANVATTSFLLGAGLSRH 257
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
N Q G +T ++S L V+ + D +R L+H +GYC RQ+HK ++A G+AV
Sbjct: 258 NTSAQLNGENTNLAINSLSLPVNQEVCD--TRSYLEHNKGYCTSRQMHK-VIARDKGRAV 314
Query: 373 FDGNVKV 379
F+G +KV
Sbjct: 315 FNGMIKV 321
>gi|365875814|ref|ZP_09415339.1| FeS assembly protein SufD [Elizabethkingia anophelis Ag1]
gi|442587591|ref|ZP_21006407.1| FeS assembly protein SufD [Elizabethkingia anophelis R26]
gi|365756326|gb|EHM98240.1| FeS assembly protein SufD [Elizabethkingia anophelis Ag1]
gi|442562762|gb|ELR79981.1| FeS assembly protein SufD [Elizabethkingia anophelis R26]
Length = 435
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 146/350 (41%), Gaps = 42/350 (12%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTP---WPSRKDEPFRFTDTSMIKSSQIQ 111
SLE + + + + L + L D L +P +K+E +++T+ + I + +
Sbjct: 2 SLEKQILDNHMAFLETLKHRFLDDKRKAALAKFQEIGFPKKKNEEYKYTNLAEIVNKEYN 61
Query: 112 PITRPSSSLDVST---------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
P +VS + F +V I+G ++ +S + + ++ ++D
Sbjct: 62 FF--PKKEHNVSKKDLDALHIGEENFDYIVFINGELRKEFSKIS-IENVEFLSFNYALND 118
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAP--DLGVIY--------VPAGCKVENPIYLKYL 212
K V + F +I P DL + Y VP +E PI++ YL
Sbjct: 119 EKHKEVFE--------KYFNTITHEDNPFADLNLAYCKYGFFLHVPKNTVIEKPIHVFYL 170
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY-WANSVLEVVIGKGGK 271
S + ++ N R +++ E G +V +IE +D + + NSV E+ + K
Sbjct: 171 SQ-----NQEENTFYNTRNLLIAEAGSKVEVIES--HHNFDDTFTFTNSVTEIFVYPNAK 223
Query: 272 VRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSS 331
LQN S + + T RQE S + S GGKL R+N+ G + + ++
Sbjct: 224 ADWHKLQNDSDTSYLVDNTYARQEKDSLATVNTFSFGGKLVRNNLDFIHNGENINSFMNG 283
Query: 332 FHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
++ +DQ D H+ + + P Q +K + VF+G V V++
Sbjct: 284 ITIINNDQLVDHHTAVHHNFPNCESYQNYKGVFG-GKSHGVFNGKVFVDK 332
>gi|86134637|ref|ZP_01053219.1| FeS assembly protein SufD [Polaribacter sp. MED152]
gi|85821500|gb|EAQ42647.1| FeS assembly protein SufD [Polaribacter sp. MED152]
Length = 437
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 7/203 (3%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D S+N A + IY+P +V+ PI + ++ G S+ + PR +++VEE
Sbjct: 137 DNLTSLNTAFASEGAYIYIPKNIEVQKPIQI--INFTTG---SEPATMIQPRNLIVVEEN 191
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
V IIE N +N V EV K V + +QN + NA+ + T V Q++ S
Sbjct: 192 SHVQIIERHQSLTSN-AVLSNVVTEVFAAKSATVDYYKIQNDNTNASLVDNTYVNQKSNS 250
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
+ S GG ++R+N++ Q G ++ L ++ Q D H+ + P Q
Sbjct: 251 VVSVHTFSFGGNITRNNLNFYQNGEHIDSILKGITIIEGKQHVDHHTLVHHIEPNCESHQ 310
Query: 359 LHKCIVAHSLGQAVFDGNVKVNR 381
+K I VF+G V V +
Sbjct: 311 DYKGIFDER-STGVFNGKVIVEK 332
>gi|402773181|ref|YP_006592718.1| FeS assembly protein SufD [Methylocystis sp. SC2]
gi|401775201|emb|CCJ08067.1| FeS assembly protein SufD [Methylocystis sp. SC2]
Length = 440
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 140/332 (42%), Gaps = 36/332 (10%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP------- 116
S+ PQ L KLR ++ T P+R+DE +++TD + ++P+ P
Sbjct: 28 SAGAPQ---LAKLRTAAFDAFAKTGLPNRRDEAWKYTDLRALL-RDVKPLAAPPEDSAKQ 83
Query: 117 -SSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
+ + V +V + G+ +L +L G+ V SL S+ + K D +
Sbjct: 84 GARNAAVLEGVASRRVVFVGGYFVPELSDLGDLEAGLSVVSL---SEALAK--GDAAAMT 138
Query: 176 QCGDL------FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
Q G++ +++N + VI + AG V+ PI L + V G + L
Sbjct: 139 QIGNVGEVDDPAFALNTAFMGEGVVIRIGAGVCVDKPIQLVF--VAGAQPATYFL----- 191
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
R +V+VE+G +IE F G+ + Y N+ EVV+ +G + + ++ A H+
Sbjct: 192 RSLVIVEKGARATLIESFEGETVQE-YHVNAATEVVLEEGASLERLKISHEGAAAMHVST 250
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
+ + GG + R+ + G L +LL + D + L L
Sbjct: 251 FVASLAADARLSDFGFNLGGAVLRNQSFININGQGAHAGLRGANLLKGKEHAD--ATLFL 308
Query: 350 DHP--RGYCRQLHKCIVAHSLGQAVFDGNVKV 379
DH R + L K ++ S QAVF G + V
Sbjct: 309 DHAAERSESKALFKSVLDDS-SQAVFQGKILV 339
>gi|453331367|dbj|GAC86946.1| ABC transporter permease [Gluconobacter thailandicus NBRC 3255]
Length = 397
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
+++EEG + + + G EG Y AN ++V+GKG ++ H LQ S A H+ A
Sbjct: 158 IVLEEGASLTLYDLNAG-EGR--YVANPRFDIVVGKGARLTHVKLQQDSQTAGHLAIIAA 214
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
+ Y+ ++ GG+L+RH V P + ++ ++ ++ DL S + P
Sbjct: 215 SVDAGGNYDSFTLNHGGELARHEVVSTLNAPHAQVHVNGIQIVDGNRLNDLTSMIHHAAP 274
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
RQ K +++ + GQ VF G + V+R
Sbjct: 275 DCGSRQTVKTVLSEN-GQGVFQGKILVDR 302
>gi|414343390|ref|YP_006984911.1| ABC transporter permease [Gluconobacter oxydans H24]
gi|411028725|gb|AFW01980.1| ABC transporter permease [Gluconobacter oxydans H24]
Length = 397
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
+++EEG + + + G EG Y AN ++V+GKG ++ H LQ S A H+ A
Sbjct: 158 IVLEEGASLTLYDLNAG-EGR--YVANPRFDIVVGKGARLTHVKLQQDSQTAGHLAIIAA 214
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
+ Y+ ++ GG+L+RH V P + ++ ++ ++ DL S + P
Sbjct: 215 SVDAGGNYDSFTLNHGGELARHEVVSTLNAPHAQVHVNGIQIVDGNRLNDLTSMIHHAAP 274
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
RQ K +++ + GQ VF G + V+R
Sbjct: 275 DCGSRQTVKTVLSEN-GQGVFQGKILVDR 302
>gi|308186668|ref|YP_003930799.1| iron-sulfur cluster biosynthesis protein sufD [Pantoea vagans C9-1]
gi|308057178|gb|ADO09350.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea vagans C9-1]
Length = 426
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 127/305 (41%), Gaps = 24/305 (7%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI----QPITRPSSSLD-VSTDAQFPSLVLIDG 136
Q L+ P+RK E +++T + S Q P T + +D ++ LV +DG
Sbjct: 35 QQLMRVGLPTRKHENWKYTPLDTLLSQQFVLPDAPQTLSAEQVDALALPLDAIRLVYVDG 94
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIY 196
Q A + ++ L V + + Q ++F + A ++ +
Sbjct: 95 QFQ-PAFSSRDV-------ELFEVQHSVAAERRPLPAAVQP-EVFLHLTESLAEEVTTLR 145
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY 256
+ G P+YL L + G + + R + +EE E +IE +V + +
Sbjct: 146 LARGKAAARPVYL--LHITSGQ--QTGMNTVHYRHHLQLEESAEAEVIEHYVSLD-ERAH 200
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
+ + IG K+ H+ L +S + H + G LSRHN
Sbjct: 201 FTGTRFTFAIGDNAKLTHTKLAFESSASYHFAHNDLVIGNDGQVSSTSFLLGAGLSRHNT 260
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 374
Q G +T ++S L V + D +R L+H +G+C RQ+HK IV G+AVF+
Sbjct: 261 STQLNGENTTLAINSLVLPVKQEVAD--TRTYLEHNKGHCVSRQMHKTIV-RDKGRAVFN 317
Query: 375 GNVKV 379
G++KV
Sbjct: 318 GHIKV 322
>gi|421682602|ref|ZP_16122412.1| feS assembly protein SufD [Shigella flexneri 1485-80]
gi|404340465|gb|EJZ66887.1| feS assembly protein SufD [Shigella flexneri 1485-80]
Length = 329
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTSLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L Y++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMYIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|188533953|ref|YP_001907750.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
tasmaniensis Et1/99]
gi|188028995|emb|CAO96863.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
tasmaniensis Et1/99]
Length = 398
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 35/312 (11%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVSTDAQFP------SLVLI 134
Q LL P+RK E +++T + +Q +QP + LD T LV +
Sbjct: 8 QQLLRLGLPTRKQENWKYTPLDRLLDNQFVQP---EPAKLDADTIQSLALPIDAVRLVFV 64
Query: 135 DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV 194
DG S L DG + + ++ +R + + Q ++F + A +
Sbjct: 65 DGRFS------SELSDGEHDLFTIQIAQAAERR--ELNAPVQP-EVFLHLTESLAEQVTF 115
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I + G P+YL ++S + + +L S+ R + ++ E +IE ++
Sbjct: 116 IQLARGKAATRPLYLLHIS----SSSAGELNTSHYRHHLQLDAAAEATVIEHYISLSAAP 171
Query: 255 CYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ S +G + H S+ + S + +H T R + + G L
Sbjct: 172 -HFTGSRFTAEVGDNASLAHYNLSFEDSSSYHFSHNDLTLGRDTRVQSHSFL---LGAGL 227
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RH+ Q G ++ ++S L + + D SR L+H +GYC RQLHK IV G
Sbjct: 228 TRHHTSTQLNGEGSDLAINSLMLPIDKEVCD--SRTWLEHNKGYCQSRQLHKTIV-RDRG 284
Query: 370 QAVFDGNVKVNR 381
+AVF+G +KV +
Sbjct: 285 RAVFNGIIKVAK 296
>gi|85059412|ref|YP_455114.1| cysteine desulfurase activator complex subunit SufD [Sodalis
glossinidius str. 'morsitans']
gi|84779932|dbj|BAE74709.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 428
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 33/304 (10%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSS------LDVSTDAQFPSLVLIDGFIQNSAL 143
P+R+ E +++T + + + P T S S L ++ DA LV +DG A
Sbjct: 44 PTRQHEHWKYTPLDGLLAHRFAPATARSVSAAVRDALSLTLDAY--RLVFVDGRF---AP 98
Query: 144 NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV 203
LS+ G++ + V +G +R + Q ++F + + + I +P G
Sbjct: 99 ALSDSDTGLWQ---IEVEEGAARRA--LPAPIQP-EVFLHLTESLSQETTRIRLPEGKAA 152
Query: 204 ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLE 263
+ P+YL L + G+ D + L + R + +E G + IIE F + +++ +
Sbjct: 153 QRPLYL--LHISQGSEDKEALSTLHYRHHIDIESGAQGQIIEHFTSVDAQ-GHFSGARTT 209
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST----GGKLSRHNVHVQ 319
+ +G + H L +S + H + + G + V S+ G L+RH Q
Sbjct: 210 LAVGDNAHLSHIKLAFESRASYHFS----HNDISVGRDAVVRSSTFILGAGLTRHQTSAQ 265
Query: 320 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNV 377
G ++ ++S L D +R L+H +G+C RQLHK ++A G+ VF+G +
Sbjct: 266 LNGEGSDLAINSLLLPSGQDISD--TRTYLEHNKGHCLSRQLHK-VIARDRGKGVFNGLI 322
Query: 378 KVNR 381
KV +
Sbjct: 323 KVAK 326
>gi|456735436|gb|EMF60187.1| Iron-sulfur cluster assembly protein SufD [Stenotrophomonas
maltophilia EPM1]
Length = 420
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 143/320 (44%), Gaps = 16/320 (5%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVS 123
S+ Q R + L P+ ++E +++T + ++ P+ P+ +
Sbjct: 7 SMAQAFCGSDARREALDAALRDGLPAARNEAWKYTSLRQLERRAFAAAPLQGPALDAALL 66
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGDL 180
D P LV ++G + + ++ LP GV + L L S+ ++ + + ++
Sbjct: 67 EDIPAPRLVFVNGRLDAALSDVQALPSGVQLQPLSAALASSEDAVRFLGRRYERSE--EI 124
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F +N A + V+ V G +V+ P+ L + SV G+ D + R ++ + G
Sbjct: 125 FARLNAALADEGVVLRVDEGVQVDAPLQLVFASV-AGDTDLAW----HHRHLIELRAGAS 179
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
+G++E G+ + N+VL + + ++H+ +Q S T + Y
Sbjct: 180 LGVVEHRFSV-GDSAHLDNTVLHAHVARDAVLKHARVQAGSARQTSFLRTDAVLARDAQY 238
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQL 359
V++ G LSRH ++V+ G + +L++ +L+ + + + +RL +DH R +L
Sbjct: 239 HRVDLELGAALSRHELNVRLEGDN--AQLTANGVLLGNGRRHVETRLGIDHIARDTACEL 296
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
VA + + VF G +++
Sbjct: 297 LWRGVAANRSRVVFHGGIQI 316
>gi|162148828|ref|YP_001603289.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
gi|161787405|emb|CAP57000.1| putative FeS assembly protein SufD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 430
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 128/318 (40%), Gaps = 39/318 (12%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS------------SQIQPITRPSSSLDVST 124
RD ++ L ++ P E +++T + S + I + + +
Sbjct: 37 RDRAAALLRASGLPRTGVEAWKYTSLRALADIPFAAAPARPDMSAVHAIV-AETEREFAL 95
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
DA P V++DG + LS LPDGV V R++ D+ ++
Sbjct: 96 DADLPRAVVVDGRFDAA---LSRLPDGVTV-----------TRLTARDESPPYDDVATAL 141
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N + A D V++V G + L DS L + +PR +++++G + ++
Sbjct: 142 NTLLADDGLVLHVGPGVDAGRMLLLSVTVA-----DSAPLSV-HPRHRIVLDQGARLSVL 195
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
+ VG+ Y N V ++ + + H+ LQ + A H+ + Y+
Sbjct: 196 DLAVGR---GAYLHNPVFDITVADNAALIHAKLQAEDPAAQHLAVIHAEVGAGASYDSFT 252
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 364
++ G L+RH VH + ++ LL Q DL S + P RQ K ++
Sbjct: 253 LTLGASLARHEVHARLAAEGGIVHVNGAQLLDGRQVADLTSVITHAAPACNSRQTVKNVL 312
Query: 365 A-HSLGQAVFDGNVKVNR 381
+ H+ G VF G + V R
Sbjct: 313 SGHARG--VFQGKILVER 328
>gi|296102713|ref|YP_003612859.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057172|gb|ADF61910.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 423
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 151/341 (44%), Gaps = 46/341 (13%)
Query: 60 LPSSSSSLPQPLPL---QKLRDSSS-----QTLLSTPWPSRKDEPFRFTDTSMI------ 105
LP+SS++L Q L Q R S Q +L P+RK E +++T +
Sbjct: 4 LPNSSNALQQWHRLFEAQGGRRSEQAQQHLQQMLRLGLPTRKHENWKYTPLEGLLNAEFV 63
Query: 106 -KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ + I P R + +L+V LV +DG + +LS+ D G + ++D
Sbjct: 64 SQRADITPTQRDALALNVDA----LRLVFVDGQFRP---DLSDSTD--ESGYTIAINDER 114
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+ E +F + A + I+V + P+ L +++ +D ++
Sbjct: 115 QSLTAPVQPE-----VFLHLTESLAQSVTQIHVKRNQRPAKPLLLMHIT---QGLDGDEI 166
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRH---SYLQNQ 280
++ R + + EG E IIE +V ND ++ + L + + ++ H ++ Q
Sbjct: 167 NTAHYRHHLELAEGAEATIIEHYVSL--NDTRHFTGARLSMNVAANAQLHHIKLAFENPQ 224
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
S + AH + A + + GG + RHN Q G +T ++S + V +
Sbjct: 225 SHHFAHNDILLGQDAAAYSHSFL---LGGAVLRHNTSTQLNGENTTLRINSLAMPVKSEV 281
Query: 341 QDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 282 CD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|340621063|ref|YP_004739514.1| hypothetical protein Ccan_02850 [Capnocytophaga canimorsus Cc5]
gi|339901328|gb|AEK22407.1| UPF0051 protein [Capnocytophaga canimorsus Cc5]
Length = 432
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 135/329 (41%), Gaps = 40/329 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD---------------TSMIKSSQIQPITRPS 117
L R+ S +P+RKDE +++T + + + QIQP +
Sbjct: 21 LYNTRNQSIAYFREKGFPTRKDEAWKYTSLKDLLNHNFEIVQSVKNQVSAEQIQPFLLET 80
Query: 118 SSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISE 174
S V V +DGF + +++ D + + L L G E
Sbjct: 81 DSYKV---------VFVDGFFNDELSDIN--SDEILISPLSEILKSDKGKEFSEKHLNQE 129
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
+ D+F ++N + IYV +E PI L +++ +++ PR ++
Sbjct: 130 TRKDDVFTALNTAFIQEGICIYVAKNKVIEKPIQLLFVTS-----NTEISLCLQPRNIIE 184
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
V E +V IIE NSV E+ + + + +QN + A+ I T + Q
Sbjct: 185 VGENAQVKIIETHQSLSSQPM-LTNSVTEIFVEDNALLDYYKVQNDNQQASLIDNTYISQ 243
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 354
+ S + S GG L+R+N++ G E+ L +L +Q D ++ L++H +
Sbjct: 244 QKNSNASVHTFSFGGALTRNNLNFFHHGEHLESTLKGITILSDNQHVDHYT--LVNHAQP 301
Query: 355 YCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
C Q +K I++ VF+G + V +
Sbjct: 302 NCESHQDYKTILSDK-SAGVFNGKIMVEK 329
>gi|86750108|ref|YP_486604.1| FeS assembly protein SufD [Rhodopseudomonas palustris HaA2]
gi|86573136|gb|ABD07693.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris HaA2]
Length = 437
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 17/254 (6%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
LVL+DG + S +L+ L G+ + SL D D + + ++N
Sbjct: 97 LVLVDGALVPSLSDLTALEAGLSIRSLRDALDA----GDDRLLSLDNANPMTALNTALMT 152
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN-PRVVVLVEEGGEVGIIEEFVG 249
D VI V G K P+++ +++ G P + R ++ + ++E +V
Sbjct: 153 DGVVIEVADGAKPARPLHILHIASGGA-------PAAMFTRSLISIGNNAAATVVESYVA 205
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
EG Y + + IG G ++ H L S A I VR + Y +V ++TG
Sbjct: 206 SEGAGVYQVHDAAVIAIGDGARLDHVRLIEDSREAFSIAAAEVRVGAHAHYNVVGIATGA 265
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHS 367
+SR++ V G + E + +LL Q D + L+++H +C R+ + VA
Sbjct: 266 LVSRYSSTVTIAGEHAQVETNGVNLLNGKQHAD--TTLVMNHDVPHCVSREGFRA-VADD 322
Query: 368 LGQAVFDGNVKVNR 381
G +VF G + V +
Sbjct: 323 RGHSVFQGRINVRQ 336
>gi|424667451|ref|ZP_18104476.1| FeS assembly protein SufD [Stenotrophomonas maltophilia Ab55555]
gi|401069065|gb|EJP77588.1| FeS assembly protein SufD [Stenotrophomonas maltophilia Ab55555]
Length = 420
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 143/323 (44%), Gaps = 22/323 (6%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVS 123
S+ Q R L P+ ++E +++T + ++ P+ P+ +
Sbjct: 7 SMAQAFCGSDARREVLDAALRDGLPAARNEAWKYTSLRQLERRAFAAAPLQGPALDAALL 66
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYV----GSLLGVSDGIMKRVSDFISEF--QC 177
D P LV ++G + + ++ +LP GV + +L D + F+ +
Sbjct: 67 EDIPAPRLVFVNGRLDAALSDVQSLPAGVQLQPLSAALASGEDAVR-----FLGRRYERS 121
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
++F +N A + V+ V G +VE P+ L + SV G+ D + R ++ +
Sbjct: 122 EEIFARLNAALADEGVVMRVDEGVQVEAPLQLVFASV-AGDTDLAW----HHRHLIELRA 176
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
G +G++E + G+ + N+VL + + ++H+ +Q S T
Sbjct: 177 GASLGVVEHRLSV-GDSAHLDNTVLHAHVARDAVLKHARVQAGSARQTSFLRTDAVLARD 235
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYC 356
+ Y V++ G LSRH ++V+ G + +L++ +L+ + + + +RL +DH R
Sbjct: 236 ARYHRVDLELGAALSRHELNVRLEGDN--AQLTANGVLLGNGRRHVETRLGIDHIARDTS 293
Query: 357 RQLHKCIVAHSLGQAVFDGNVKV 379
+L VA + + VF G +++
Sbjct: 294 CELLWRGVAANRSRVVFHGGIQI 316
>gi|241204824|ref|YP_002975920.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858714|gb|ACS56381.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 424
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 130/331 (39%), Gaps = 30/331 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ LP + LRD L P+R+ E + +TD + T
Sbjct: 15 ALIEAFNQQIGELPGNGTVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------T 68
Query: 115 RPSSSLDVSTDAQFP------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
P + D ++A P L +I G N L Y LL DG
Sbjct: 69 VPQQAGDAGSEALEPLVADATVLAVIQGH-SNQKATADGLGVSAYSEHLL---DG---SA 121
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+D + D ING D VI VPA ++ENP+ +++ + G +LP+S
Sbjct: 122 ADGLDALGSDDAVGRINGSFVRDGYVIDVPAETELENPLEIQF--IHAGGQTHTRLPVS- 178
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
G + +IE G D + V ++ +G+G ++ LQ Q + H+
Sbjct: 179 ------FGAGVKATVIERHRTVTG-DAALVSHVTDITVGEGTELTWIILQQQGADDTHLG 231
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 348
+ + L ++ GGKL R +H++ G + L +LL D D+ L
Sbjct: 232 QIRIDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGGDTHTDVTMVLG 291
Query: 349 LDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
D P ++ + +V + VF G ++V
Sbjct: 292 HDVPNTGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|410943157|ref|ZP_11374898.1| ABC transporter permease [Gluconobacter frateurii NBRC 101659]
Length = 398
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
+++EEG + + + G EG Y N L++V+GKG ++ H LQ SL A H+ A
Sbjct: 159 IVLEEGASLTLFDVNAG-EGR--YVTNPRLDIVVGKGARLTHVKLQQDSLTAGHLAIVAA 215
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
+ Y+ ++ G +L+RH V + + ++ ++ + DL S + P
Sbjct: 216 SVDGNGNYDSFTLNNGSELARHEVVAKLTAAHAQVHVNGIQIVDGSRLNDLTSMIHHAAP 275
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
RQ K +++ S GQ VF G + V+R
Sbjct: 276 DCGSRQTVKTVLSES-GQGVFQGKILVDR 303
>gi|227539029|ref|ZP_03969078.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
gi|227241085|gb|EEI91100.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
Length = 446
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 156/349 (44%), Gaps = 35/349 (10%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-S 103
+D QL + ++ +S + + L KLR + +P+ K+E +++T+ S
Sbjct: 18 ADSLFQQLVDGFQEQENAS-----ETVALTKLRQDAFDKFRQVGFPTVKNEDWKYTNVHS 72
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLL 158
++ + + LD S A P L VL++G L S+L + + + ++
Sbjct: 73 LVNKTYVLNPDVDIDGLDFSK-ADIPDLDAHRIVLVNG---QYILAFSSLEEEIGL-TVK 127
Query: 159 GVSDGIMKRVSDFISEF-----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
+ D + +FI+ F + + F ++N I V G ++ PI++ +++
Sbjct: 128 PIDDAAQE--GNFITHFAHYADKTQNPFVALNTALYTSGLYIDVAKGKTLQKPIHIVHVA 185
Query: 214 VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVR 273
+ + R ++++E E IIE F+ +G+ N V E+V+ + K++
Sbjct: 186 TGAEDF------FTQTRNLIVLEPHAEAEIIESFITLDGSAKNVQNKVTEIVVQENAKLQ 239
Query: 274 HSYLQNQSLNAAHIKWTAVRQETASGYELVEVST-GGKLSRHNVHVQQLGPDTETELSSF 332
H YLQ + + ++ T V QE S Y + G R++++V+ E+ L
Sbjct: 240 HYYLQVSASVSHYLNHTEVYQEKYSLYNNYNCNFPGASFVRNDINVRLDAEYVESHLYGI 299
Query: 333 HLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKV 379
+L +Q D H+ ++DH + +C + +K I AVF+G + V
Sbjct: 300 NLTADNQFVDNHT--VVDHMKPHCESYEWYKNI-PQDTSTAVFNGKIFV 345
>gi|390944982|ref|YP_006408743.1| Iron-regulated ABC transporter permease protein SufD [Belliella
baltica DSM 15883]
gi|390418410|gb|AFL85988.1| Iron-regulated ABC transporter permease protein SufD [Belliella
baltica DSM 15883]
Length = 425
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 141/323 (43%), Gaps = 23/323 (7%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
+++PQ + LR+SS + L P K+E ++FT S I T PS ++ +S+
Sbjct: 15 TNIPQYSSFEDLRNSSLEFLKKNGLPHLKEEEYKFTQISKKLEQNITAFT-PSKNISISS 73
Query: 125 -DAQFPSLVLIDG--FIQNSAL---NLSNLPDGVYVGSLLGVSDG-IMKRVSDFISEFQC 177
D + DG + N+ L LS++ Y S L S ++ ++ F S
Sbjct: 74 SDVKSNLFEGFDGDVIVFNNGLLDTQLSSISSKNYSFSKLSDSKSELLGNIATFES---- 129
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPI-YLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D F ++N +G D I G KVE PI +L + G I PR+++ V
Sbjct: 130 -DPFTALNNIGFEDGLHIQTAKGKKVEKPIAFLLFNQANEG-------QIIQPRILIEVA 181
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
E +V IE + + + Y++N+V+EV + + + LQN++ A + A
Sbjct: 182 ENSDVTFIENTISAD-EEAYFSNAVVEVKVAQNSHAYYYRLQNENRKAISVTNFATDIHR 240
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
+ + V + + R+N+ + L + +LL D H+ + P
Sbjct: 241 DATFTSVALQLQADMLRNNLTLNLLDKGCVGNMYGLYLLNGKTHVDNHTNVDHTKPNSDS 300
Query: 357 RQLHKCIVAHSLGQAVFDGNVKV 379
+L+K I+ S + VF+G + V
Sbjct: 301 NELYKGILTDS-SRGVFNGKIFV 322
>gi|451979728|ref|ZP_21928141.1| putative Iron-sulfur cluster assembly protein SufD [Nitrospina
gracilis 3/211]
gi|451763097|emb|CCQ89338.1| putative Iron-sulfur cluster assembly protein SufD [Nitrospina
gracilis 3/211]
Length = 438
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 157/358 (43%), Gaps = 33/358 (9%)
Query: 35 LQTTFPQATFSDPFVIQL-AESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK 93
+ TT + S+ V+ L E L+DS P+ L+ L ++ + + +P RK
Sbjct: 1 MSTTLDVISESEQAVLDLHKEFLKDSDPA----------LKPLNEAGIRRFEAVKFPHRK 50
Query: 94 DEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNL 148
E + F +T + ++ Q ++ A +PS +V ++G N S L
Sbjct: 51 HEMYTFVNTHDLTETRFQLTGHAAADAKEVQAAVYPSCQDRVIVFVNGVYDEKLSNTSGL 110
Query: 149 PDGVYVGSLL-GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
V + L+ + D ++ E + D+F ++N A D V+ V +E P+
Sbjct: 111 EAEVKITPLVQAIQDEAVQEYLLATVE-EENDVFAALNSGFAKDGLVVSVAEKAVIEKPL 169
Query: 208 YLKYLSV--EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
+ Y+S + G V S+PR++V ++ E + +F+G+ Y+ N+V + +
Sbjct: 170 QVLYVSTGTDNGTV------ASHPRLLVKLQPRAEFKLAVKFIGQGAG--YFVNAVQDFL 221
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
+ + + +Q H+ T V S + S+G +L+RH+ V+ D
Sbjct: 222 VDPDAGLTYWQVQRDDPAVWHMSKTRVHLHRNSRFVCTNGSSGSRLARHHYEVRL--KDE 279
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
EL+ + V + + H+ + + H +C Q + ++ ++ ++ FDG V V++
Sbjct: 280 GAELNMNGISVLENEEQAHNFVRVHHEAPHCTSNQFFRNVI-NNKARSSFDGTVIVDK 336
>gi|440759888|ref|ZP_20939010.1| Iron-sulfur cluster assembly protein SufD [Pantoea agglomerans
299R]
gi|436426362|gb|ELP24077.1| Iron-sulfur cluster assembly protein SufD [Pantoea agglomerans
299R]
Length = 426
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
++F + A ++ + + G PIYL L + G + + R + +EE
Sbjct: 128 EIFLHLTESLAEEVTTLRLARGKSAARPIYL--LHITSGQ--QTGMNTVHYRHHLQLEES 183
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
E +IE +V + ++ + +G K+ H+ L +S + H +
Sbjct: 184 AEAEVIEHYVSLD-ERAHFTGTRFTFAVGDNAKLTHTKLAFESSASYHFAHNDLVIGNDG 242
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
G LSRHN Q G +T ++S L V + D +R L+H +G+C
Sbjct: 243 QVSSTSFLLGAGLSRHNTSTQLNGENTTLAINSLVLPVKQEVAD--TRTYLEHNKGHCMS 300
Query: 357 RQLHKCIVAHSLGQAVFDGNVKV 379
RQ+HK IV G+AVF+G++KV
Sbjct: 301 RQMHKTIVRDK-GRAVFNGHIKV 322
>gi|410028958|ref|ZP_11278794.1| Iron-regulated ABC transporter permease protein SufD [Marinilabilia
sp. AK2]
Length = 425
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 134/323 (41%), Gaps = 25/323 (7%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
S P Q++R +S L T P+ K+E ++FT I Q I +L + D
Sbjct: 16 SHPHLNNYQEMRKNSEAFLQKTGLPAPKEEEYKFT---AISKKIDQSIKNFGPALPTNLD 72
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS--DGIMKRVSDFISEFQCG----- 178
+ + +GF + L +N G+Y L + D +K + + E G
Sbjct: 73 QELVQKEVFEGF-EGDILVFNN---GIYQAELSRFTGQDYALKAL-ELEEEAGLGKIVKI 127
Query: 179 --DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D F ++N I+V ++E PI+L + + + I PR+ + VE
Sbjct: 128 EKDPFTALNNATFSSGVSIHVGRNRQIEKPIFLLFFN------QANNGEIITPRLYIQVE 181
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
+ EV +E V +D Y++N V E+ + + V +S LQ +S A +
Sbjct: 182 DNAEVTFLENTVSL-NDDPYFSNMVTEIKVAQNAHVHYSRLQAESRKAIVVNNFETDIHR 240
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
+ + +S G + R+N+ + L E + +LL D H+ + P
Sbjct: 241 DATFTSSVISLSGDMVRNNLTLNLLDSGCEGNMYGLYLLNGKTHVDNHTNVDHTKPHAES 300
Query: 357 RQLHKCIVAHSLGQAVFDGNVKV 379
+L+K I+A + VF+G + V
Sbjct: 301 NELYKGILADQ-SRGVFNGKIFV 322
>gi|365887511|ref|ZP_09426350.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3809]
gi|365336882|emb|CCD98881.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3809]
Length = 440
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 139/344 (40%), Gaps = 33/344 (9%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + +R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGTGKVADIRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
P ++ + S LVL+DG + +L+ LP GV V +L V +
Sbjct: 69 PLAGAPDAAALARARSAIASVAIEGAAKLVLVDGVVAAELSDLAALPSGVTVRTLRAVLE 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ + D S+N A D V+ V G ++ +P+ L +++ G +
Sbjct: 129 EQGNEARGDLLLTKASDPMLSLNAALATDGVVVTVADGTQLSSPVQLIHVATAG---KAA 185
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+ S+ R V G ++E + EG Y AN + +G ++ H L +
Sbjct: 186 RYSRSHLR----VGHGARATLVETSIAAEGATAYQANDAAVISVGDEAQLSHIRLMRDAA 241
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
A ++ S L +++GG +SR G +E ++ +LL Q D
Sbjct: 242 EAVNVSSELFTVGARSKLSLFNMTSGGAVSRLQAFFTLAGEASELIVNGVNLLRDKQHGD 301
Query: 343 LHSRLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKVNR 381
+ L++DH C R+ + ++ AHS VF G + V +
Sbjct: 302 M--TLVVDHAVPGCTSRENFRAVLDDRAHS----VFQGRIIVRQ 339
>gi|288925322|ref|ZP_06419256.1| FeS assembly protein SufD [Prevotella buccae D17]
gi|402307394|ref|ZP_10826417.1| FeS assembly protein SufD [Prevotella sp. MSX73]
gi|288337793|gb|EFC76145.1| FeS assembly protein SufD [Prevotella buccae D17]
gi|400378444|gb|EJP31299.1| FeS assembly protein SufD [Prevotella sp. MSX73]
Length = 448
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 142/307 (46%), Gaps = 27/307 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVS 123
L +RD + + +PSRK E +R+TD S + ++++ P + DV
Sbjct: 27 LNGVRDKAFEDFCRQGFPSRKVERYRYTDMSKLFEPDYGLNLNRLEIPINPYEAFKCDVP 86
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISEFQCGDL 180
+ V+ D F L + LPDGV V SL V+ G+++R +++ + D
Sbjct: 87 NLSTSLYFVVNDAFY-TKQLPKTELPDGVIVDSLCRVATENPGLIERYYARMAKTE-DDA 144
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M A D ++YVP K++ + + +++ +VD + N RV++++E+G E
Sbjct: 145 ITALNTMLAQDGLLVYVPKNVKLDRAV--QVINILRSDVD----LMVNRRVLIILEQGAE 198
Query: 241 VGIIEEFVGKEGNDCYWANS-VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ F +D ++ + V+E +G+ + L+ + + + Q+ S
Sbjct: 199 AKFL--FCDDSADDRHFLTTQVIEAYVGENASLDLYCLEETHVKNTRVSNVYIEQQAYSR 256
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 357
++ ++R+ + + G E + +++D+TQ + + L+DH +C
Sbjct: 257 VNHNVITLHNGVTRNKLDLVFKGEGAECFANG--CVIADKTQRVDNNTLIDHQVPHCTSN 314
Query: 358 QLHKCIV 364
+L+K ++
Sbjct: 315 ELYKYVL 321
>gi|304397639|ref|ZP_07379516.1| FeS assembly protein SufD [Pantoea sp. aB]
gi|304354811|gb|EFM19181.1| FeS assembly protein SufD [Pantoea sp. aB]
Length = 426
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
++F + A ++ + + G PIYL L + G + + R + +EE
Sbjct: 128 EIFLHLTESLAEEVTTLRLARGKSAARPIYL--LHITSGQ--QTGMNTVHYRHHLQLEES 183
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
E +IE +V + ++ + +G K+ H+ L +S + H +
Sbjct: 184 AEAEVIEHYVSLD-ERAHFTGTRFTFAVGDNAKLTHTKLAFESSASYHFAHNDLVIGNDG 242
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
G LSRHN Q G +T ++S L V + D +R L+H +G+C
Sbjct: 243 QVSSTSFLLGAGLSRHNTSTQLNGENTTLAINSLVLPVKQEVAD--TRTYLEHNKGHCMS 300
Query: 357 RQLHKCIVAHSLGQAVFDGNVKV 379
RQ+HK IV G+AVF+G++KV
Sbjct: 301 RQMHKTIVRDK-GRAVFNGHIKV 322
>gi|389798428|ref|ZP_10201445.1| FeS assembly protein SufD [Rhodanobacter sp. 116-2]
gi|388445036|gb|EIM01124.1| FeS assembly protein SufD [Rhodanobacter sp. 116-2]
Length = 439
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 27/284 (9%)
Query: 59 SLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
SLP +S L PLP L + R + P + E +++T + +
Sbjct: 6 SLPLVASLLDAPLPASGIAWLDEARRENRAAFAVGGLPGARVEAWKYTALRGLGQRRFAA 65
Query: 113 ITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSDGI 164
+++ DV A+F P LV ++G + L LPDG+ + L L + D
Sbjct: 66 GDAGAATRDVDA-AEFALPGVGGPRLVFVNGVFRADLSALEALPDGLSLQPLALALRDDA 124
Query: 165 ------MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ R + + GD F +N A D V+ V A + P+ L ++ G
Sbjct: 125 EPLRFALSRPALVGHVREGGDAFVQVNAASAADGVVLKVAAHATIAVPVQLVFV---GAA 181
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+S+ + R ++ + EG + ++E VG G A V +V + +G ++ ++ LQ
Sbjct: 182 AESEL--AWHARNLIELGEGASLALVEHHVG-HGEQAQLATLVGDVELHEGAQLHYTVLQ 238
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
N + A I+ + +R + L + GG L RH++ + +G
Sbjct: 239 NTATGAHLIRRSGLRLHARAQMRLHVLELGGALVRHDLQAELVG 282
>gi|374599262|ref|ZP_09672264.1| FeS assembly protein SufD [Myroides odoratus DSM 2801]
gi|423324406|ref|ZP_17302247.1| FeS assembly protein SufD [Myroides odoratimimus CIP 103059]
gi|373910732|gb|EHQ42581.1| FeS assembly protein SufD [Myroides odoratus DSM 2801]
gi|404608498|gb|EKB07962.1| FeS assembly protein SufD [Myroides odoratimimus CIP 103059]
Length = 439
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 152/346 (43%), Gaps = 34/346 (9%)
Query: 56 LEDSLPSSSSSLPQPL-----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
L+D L +S + Q L L +R +T +P++K+E +++T + I
Sbjct: 3 LKDKLITSFVAFEQQLSGEHDTLHNIRLEGLKTFEDKGFPTKKEEAWKYTSLNSILKQDF 62
Query: 111 QPITRPSSSLDVS-------TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
+ + ++D +D+ LV I+G + +S L+ S DG+ V + S
Sbjct: 63 CVVPKKEVAVDYKDVKQYFLSDSDTYKLVFING-VFSSHLS-STTHDGLDVCLM---SSA 117
Query: 164 IMK-RVSDFISEF-----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
+ K + I + D ++N A + + +P V PI + YLS G
Sbjct: 118 LTKPKYKMLIDTYYNTITDKEDSLTALNAAYAVEGAFVNIPKSKVVSKPIEIVYLSTAG- 176
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSY 276
++ + PR +++V E V I+E + ++C + NSV E+ K V
Sbjct: 177 ----EQALLVQPRNLIIVGENAHVQILERH--QSLDECSIFTNSVTEIFSHKRAIVDFYK 230
Query: 277 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 336
LQN I T ++Q+ S + S GGKL+R+N++ Q G ++ + L+
Sbjct: 231 LQNDLDTGTLIDNTFIKQKQESRVSVHTFSFGGKLTRNNLNFYQDGERIDSTMKGITLIG 290
Query: 337 SDQTQDLHSRLLLDHPRGYCRQLHKCIV-AHSLGQAVFDGNVKVNR 381
Q D ++ + D P Q +K + +S+G VF+G + V++
Sbjct: 291 GKQHVDHYTLVSHDSPNCESHQNYKGLYDDNSVG--VFNGKIYVDK 334
>gi|338174481|ref|YP_004651291.1| hypothetical protein PUV_04870 [Parachlamydia acanthamoebae UV-7]
gi|336478839|emb|CCB85437.1| UPF0051 protein slr0076 [Parachlamydia acanthamoebae UV-7]
Length = 434
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 147/345 (42%), Gaps = 34/345 (9%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
ES SL + ++ L+K+R + L P+ +++ FR+ + +
Sbjct: 10 ESFHSSLEEAFRNVAGDPLLKKIRQKAWDHFLELGLPTPRNDVFRYVPLRKLFAHTYATA 69
Query: 114 TRPSSSLDVSTDAQFPS-------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
P+ LD + A F + LV ++G+ S ++S LP V V L + ++
Sbjct: 70 LTPA--LDKAKIADFIAPECIHSVLVFVNGYYVPSLSDISGLPTKVVVTPL----EQAVR 123
Query: 167 RVSDFISE------FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
F++ + D F ++N D +Y+P +VE PI + + +D
Sbjct: 124 SFGAFLTNQWGKTLMEETDPFATLNAAIHTDGIFVYIPPRLQVEKPIQILEI------MD 177
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
++ +S PR+ V E+ ++ +G YW N V + I + VR++ +
Sbjct: 178 TEVPFMSMPRLHFFVGAQSELNVLST-LGSLSGSTYWVNQVADFSIEEQAHVRYTQ-TSY 235
Query: 281 SLNAAHIKWTAVRQ--ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
L + T+ R + S + V + G +RH+ V G + EL+ L D
Sbjct: 236 PLPPECWQMTSTRAYLKKNSTFLAVHATEGSTTARHDYRVVLNGENAHAELNGAWTL--D 293
Query: 339 QTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
+ ++ H+ +L+DH C+ QL K I+ S + F+G + V +
Sbjct: 294 EKREAHTHVLVDHQSPNCQSLQLFKGILNGS-SHSSFEGKILVRQ 337
>gi|416301102|ref|ZP_11652877.1| Iron-sulfur cluster assembly protein SufD [Shigella flexneri CDC
796-83]
gi|417681816|ref|ZP_12331187.1| feS assembly protein SufD [Shigella boydii 3594-74]
gi|420325624|ref|ZP_14827387.1| feS assembly protein SufD [Shigella flexneri CCH060]
gi|320184432|gb|EFW59240.1| Iron-sulfur cluster assembly protein SufD [Shigella flexneri CDC
796-83]
gi|332096005|gb|EGJ01010.1| feS assembly protein SufD [Shigella boydii 3594-74]
gi|391252967|gb|EIQ12156.1| feS assembly protein SufD [Shigella flexneri CCH060]
Length = 423
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTSLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L Y++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMYIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|440747410|ref|ZP_20926669.1| Iron-sulfur cluster assembly protein SufD [Mariniradius
saccharolyticus AK6]
gi|436484330|gb|ELP40334.1| Iron-sulfur cluster assembly protein SufD [Mariniradius
saccharolyticus AK6]
Length = 425
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 25/315 (7%)
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD-------AQF 128
LR+ S Q + P+ KDE ++FT S K Q+ P+ + VS D A F
Sbjct: 26 LREESKQIVNGKGLPAAKDEEYKFTSVSK-KLEQVITDFSPAKPIAVSKDTIKDHLWAGF 84
Query: 129 PS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSING 186
LV +G LS + + +L S+ I I++ + D F ++N
Sbjct: 85 EGSYLVFNNGIFSEE---LSAFENSGFEVQMLSESNAIALGS---IAKAE-KDPFIALNT 137
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
+ D I +P G KV++PI + + + + I +PR+++ V E E +E
Sbjct: 138 IYFEDGIQISIPRGKKVDSPILFLFFN------QANEGQIISPRILIEVAENAEATFLEH 191
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 306
+ + Y++NSV E+ +G+ V +S LQN A + + + VS
Sbjct: 192 SISLD-EAVYFSNSVTEIKVGQNSHVHYSRLQNDGSKAIVVSNFETDIHRDATFTSTVVS 250
Query: 307 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAH 366
G L R+N+ ++ + +LL D H+ + P +L+K I+
Sbjct: 251 LSGDLVRNNLSLRLQDSGCVGNMYGLYLLNGKTHVDNHTNVDHTKPHAESNELYKGILTD 310
Query: 367 SLGQAVFDGNVKVNR 381
+ VF+G + V +
Sbjct: 311 Q-SRGVFNGKIFVRQ 324
>gi|329954148|ref|ZP_08295243.1| FeS assembly protein SufD [Bacteroides clarus YIT 12056]
gi|328528125|gb|EGF55105.1| FeS assembly protein SufD [Bacteroides clarus YIT 12056]
Length = 447
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 21/279 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKTEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
AL S+LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 101 GKALPKSHLPEGVIFGSLKDMAEQHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+V+ + N RV++++EEG + ++ +G + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVNF----MVNRRVLIILEEGAQARLLACDHAMDGVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
A V+E IG+ L+ + I VRQE S L ++ +R+
Sbjct: 214 ATQVVEAFIGENATFDFYELEETHTSTVRISSLYVRQEANSNVLLNGMTLHNGTTRNTTE 273
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 274 VTLAGEGAELNLCG--MAIADKNQHVDNNTTIDHAVPNC 310
>gi|329114665|ref|ZP_08243424.1| FeS cluster assembly protein SufD [Acetobacter pomorum DM001]
gi|326696145|gb|EGE47827.1| FeS cluster assembly protein SufD [Acetobacter pomorum DM001]
Length = 427
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 133/323 (41%), Gaps = 44/323 (13%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP------ITRPSSSLDV-----STD 125
R ++ LL T P R E +++T + + + Q + S LD T
Sbjct: 27 RQAAIGALLRTGLPDRHIEAWKYTSLRPLAAQEFQAPPAQYDAAQAKSLLDNLLSKHDTV 86
Query: 126 AQFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---DLF 181
P +V ++G F+++ LS LP+GV V ++ S+ Q D
Sbjct: 87 QSVPRIVFVNGRFVKD----LSLLPEGVDVSFF---------SQNNLASDVQASPDRDPL 133
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N D ++V G + L L V G S +PR V++EEG +
Sbjct: 134 VALNTALVEDGATLHVAKGADA-GRVLLISLGVAGDTAIS-----FHPRHSVVLEEGAHL 187
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
++ G Y+ N V+EV +G+ K+ H+ LQ + A + T V+ Y
Sbjct: 188 SLLSL---SAGVGQYFHNPVMEVTVGERAKLYHTTLQTEGPQAIALATTYVQVAGHGVYN 244
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 359
+ GG LSRH VH + P + ++ L Q D+ S ++ H C RQ
Sbjct: 245 SFALGLGGLLSRHEVHARLKAPHAQLHVNGAQNLAEHQVGDITS--VITHAASDCTSRQT 302
Query: 360 HKCIV-AHSLGQAVFDGNVKVNR 381
+ ++ H+ G VF G V V +
Sbjct: 303 VRNVLDGHARG--VFQGKVLVEQ 323
>gi|407780042|ref|ZP_11127290.1| hypothetical protein NA2_18695 [Nitratireductor pacificus pht-3B]
gi|407298172|gb|EKF17316.1| hypothetical protein NA2_18695 [Nitratireductor pacificus pht-3B]
Length = 422
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 26/330 (7%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L DS S LP + RD + + LL PSR+ E + +TD + SS P
Sbjct: 15 ALIDSFAGRVSELPGDAAVTVRRDEALE-LLKNGLPSRRVEAWHYTDLRRLLSS--VPAF 71
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFIS 173
+P S + S VL + +A++ + DGV V + V+D +++ ++D ++
Sbjct: 72 KPVSEAEPVAPLIERSAVL--AVLGGAAVDRNTGIDGVTVST---VADRLIEGGMTDGLA 126
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+ D +IN D VI + G ++ I L+ L GG S R V
Sbjct: 127 AAEPHDAVGAINAAFVSDGYVIDIAEGANLDRAIELQNLHT-GGQAHS--------RFSV 177
Query: 234 LVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
G + I+E + G+ +S+ ++ + +V LQ Q A+++ + R
Sbjct: 178 KAAAGAKATIVER---QAGDGEALVSSISDLDVADDAEVLWIVLQEQPDTASYLGRFSAR 234
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-- 351
+ L +++GGKL R V V+ G +E L +LL + D+ ++LDH
Sbjct: 235 LGKNAKLTLFVMNSGGKLVRQEVRVEAAGEGSEFRLRGVNLLAGEAHCDV--TMVLDHIA 292
Query: 352 PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
P Y + + +V VF G ++V R
Sbjct: 293 PDTYSTETLRNVVT-GRANGVFQGQIRVAR 321
>gi|224025202|ref|ZP_03643568.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
gi|224018438|gb|EEF76436.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
Length = 450
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 23/280 (8%)
Query: 89 WPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN 144
+P+RK E +++TD + + + P + +V P++ F+ N A +
Sbjct: 45 FPTRKQEDYKYTDVGRYFAPDYGLNLNRLEIPVNPYEVFK-CDVPNMSTSLYFVVNDAFD 103
Query: 145 -----LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
++LP+GV GSL ++ + + + + D + N + A D V+YV
Sbjct: 104 RHDSPTASLPEGVEFGSLCEIATRRPELIKKYYAHLADTSEDALAAFNTLFAQDGVVMYV 163
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI-IEEFVGKEGNDCY 256
P G VE PI L +++ +V + + N R+++++EEG + + I + E N +
Sbjct: 164 PKGVVVERPIQL--VNILRADVAT----LVNRRLLIILEEGAQAKLLICDHAMDEVN--F 215
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
+ V EV +G+ + L+ + V Q S L V+ +R+ V
Sbjct: 216 LSTQVAEVFVGENASLDLYELEETHYSTVRFSNLYVHQSAGSRVLLNGVTLHNGTTRNRV 275
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
HV GP E +L + D+ D H+ +DH C
Sbjct: 276 HVVLDGPGAEVDLCGMAIADRDEQVDNHT--FIDHRAPAC 313
>gi|312129604|ref|YP_003996944.1| iron-regulated ABC transporter permease sufd [Leadbetterella
byssophila DSM 17132]
gi|311906150|gb|ADQ16591.1| Iron-regulated ABC transporter permease protein SufD
[Leadbetterella byssophila DSM 17132]
Length = 432
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEV 241
++N A V+YVPA +E P+ +K+++ DS+ L N + +V++ EV
Sbjct: 142 ALNVAFAQQGAVVYVPANATLEEPVLIKHIN------DSRNLEAFNAIHHLTVVDKNAEV 195
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
++E F G + N+V E+ + + +V + +Q+++ + H+ T V Q+ S +
Sbjct: 196 KLVEIFQSV-GEQAAFTNAVSEIFVAEDARVDYYKIQDENDASYHVGTTQVVQKDKSYFY 254
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQL 359
V+ G R+N+++ G E+ + ++ +Q D H+ L+DH P +L
Sbjct: 255 AATVTVNGGFVRNNLNLVLDGEYIESHMYGLYIPNGNQLVDNHT--LVDHRKPNSESNEL 312
Query: 360 HKCIVAHSLGQAVFDGNVKVNR 381
+K I+ + VF+G + V +
Sbjct: 313 YKGIL-DGKSKGVFNGKIYVQQ 333
>gi|58038583|ref|YP_190547.1| ABC transporter permease [Gluconobacter oxydans 621H]
gi|58000997|gb|AAW59891.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
Length = 392
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 12/187 (6%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I VPAG + L +S+ G S L R+V+ E+G + + + G EG
Sbjct: 123 IRVPAGT---DAGLLTLVSLSDGQDVSTHL---QHRIVL--EDGASLTLYDVSAG-EGR- 172
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
Y AN ++V+GKG +RH +Q +SL A H+ + Y+ ++ G L+RH
Sbjct: 173 -YIANPRFDIVVGKGATLRHVKVQRESLTATHLAIVSADVAEKGEYDSFTLNQGSSLARH 231
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V P ++ ++ + DL S + P G RQ K +++ + GQ VF
Sbjct: 232 EAVVTLGAPHAMAHVNGVQIVDGQRLNDLTSMIHHAAPDGSSRQTVKTVLSEA-GQGVFQ 290
Query: 375 GNVKVNR 381
G + V+R
Sbjct: 291 GKILVDR 297
>gi|329964517|ref|ZP_08301571.1| FeS assembly protein SufD [Bacteroides fluxus YIT 12057]
gi|328524917|gb|EGF51969.1| FeS assembly protein SufD [Bacteroides fluxus YIT 12057]
Length = 447
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 21/288 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSL-VLIDGFIQN 140
+P+RK E +R+TD S + ++++ P SL +++ N
Sbjct: 42 FPTRKQEKYRYTDVSKFFEPDYGLNLNRLELPVNPYEVFKCDVPNMSTSLYFVVNDVFYN 101
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYVP 198
AL +LP+GV GSL ++ + V + + D + N A D ++YVP
Sbjct: 102 KALPKPHLPEGVIFGSLKEMAQQHPELVKKYYGKLADTSEDGVTAFNTAFAQDGVLLYVP 161
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWA 258
VE PI L +++ G+V+ + N RV++++EEG + ++ +G + + A
Sbjct: 162 KNVVVEKPIQL--VNILRGDVNF----LVNRRVLIVLEEGAQARLLACDHAMDGVN-FLA 214
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 318
V+EV G+ L+ + I V+QE S L ++ +R+ V
Sbjct: 215 TQVIEVFAGENATFDLYELEETHTSTVRISNMYVKQEANSNVLLNGMTLHNGTTRNTTRV 274
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 364
G E L + ++D+ Q + + +DH P +L+K ++
Sbjct: 275 TLAGEHAELNLCG--MAIADKNQHVDNHTAIDHAVPNCTSNELYKYVL 320
>gi|349699194|ref|ZP_08900823.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
europaeus LMG 18494]
Length = 424
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 29/256 (11%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVS---DGIMKRVSDFISEFQCGDLFWSINGM 187
+V ++G+ S LP GV V +L + DGI GD+ ++N +
Sbjct: 91 VVFVNGYFDA---GRSRLPRGVRVSTLAAGTLPDDGIDP----------AGDVTTALNTI 137
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEE 246
A D + VPAG V+ L + G + P+S +PR ++VE+GG + +++
Sbjct: 138 LARDGLDLVVPAG--VDGGCLLLVSIGQTGEAE----PVSFHPRHRIVVEKGGRLALLDA 191
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVS 306
G+ Y N + ++ + G + H+ +Q + A H+ + R Y+ ++
Sbjct: 192 SAGR---GQYLHNPLYDIAVADEGYLSHARVQAEGRQAVHLAVSHARVAAGGVYDSFTLT 248
Query: 307 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA- 365
G LSRH VH P ++ LL Q DL S + P RQ K +++
Sbjct: 249 LGASLSRHEVHAGLTQPGASVHVNGAQLLSGHQHGDLTSVITHAAPDCVSRQTIKNVLSD 308
Query: 366 HSLGQAVFDGNVKVNR 381
H+ G VF G + V R
Sbjct: 309 HARG--VFQGKILVER 322
>gi|315606717|ref|ZP_07881727.1| FeS assembly protein SufD [Prevotella buccae ATCC 33574]
gi|315251572|gb|EFU31551.1| FeS assembly protein SufD [Prevotella buccae ATCC 33574]
Length = 448
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 142/307 (46%), Gaps = 27/307 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVS 123
L +RD + + +PSRK E +R+TD S + ++++ P + DV
Sbjct: 27 LNGVRDKAFEDFCRQGFPSRKVERYRYTDMSKLFEPDYGLNLNRLEIPINPYEAFKCDVP 86
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISEFQCGDL 180
+ V+ D F L + LPDGV V SL V+ G+++R +++ + D
Sbjct: 87 NLSTSLYFVVNDAFY-TKQLPKTELPDGVIVDSLCRVATENPGLIERYYARMAKTE-DDS 144
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M A D ++YVP K++ + + +++ +VD + N RV++++E+G E
Sbjct: 145 ITALNTMLAQDGLLVYVPKNVKLDRAV--QVINILRSDVD----LMVNRRVLIILEQGAE 198
Query: 241 VGIIEEFVGKEGNDCYWANS-VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ F +D ++ + V+E +G+ + L+ + + + Q+ S
Sbjct: 199 AKFL--FCDDSADDRHFLTTQVIEAYVGENASLDLYCLEETHVKNTRVSNVYIEQQAYSR 256
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 357
++ ++R+ + + G E + +++D+TQ + + L+DH +C
Sbjct: 257 VNHNVITLHNGVTRNKLDLVFKGEGAECFANG--CVIADKTQRVDNNTLIDHQVPHCTSN 314
Query: 358 QLHKCIV 364
+L+K ++
Sbjct: 315 ELYKYVL 321
>gi|336397615|ref|ZP_08578415.1| FeS assembly protein SufD [Prevotella multisaccharivorax DSM 17128]
gi|336067351|gb|EGN55985.1| FeS assembly protein SufD [Prevotella multisaccharivorax DSM 17128]
Length = 447
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 150/346 (43%), Gaps = 43/346 (12%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
S+ I L + L + SS++ L +RDS+ + +PSRK E +++TD
Sbjct: 3 SEKQYIDLYAQSREMLNAHSSAV-----LNGVRDSAFEDFKRQRFPSRKVERYKYTDMDK 57
Query: 105 -------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVG 155
+ ++++ P S S DV + V+ D F + AL LP+GV V
Sbjct: 58 LFEPDYGVNVNRVEFPINPYSVFSCDVPNLSTSLYFVVNDTFYK-KALPKVGLPEGVEVM 116
Query: 156 SLLGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYL 209
SL +D DF++++ D ++N M A D I+VP KVE I
Sbjct: 117 SLKDAADVH----PDFVAKYYGKIAKTSEDAVTALNTMLAEDGLFIHVPKNIKVERAI-- 170
Query: 210 KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGK 268
+ +++ NVD + N RV+++++EG E ++ F +D + V+E +G+
Sbjct: 171 QVVNILRSNVD----LMVNRRVLIVMDEGAEAKLL--FCDDSADDRNFLGTQVIEAYVGE 224
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
+ L+ + + Q+ S ++ ++R+ + + G E
Sbjct: 225 NASLDLYCLEETHDKNTRVSNVYIDQQANSRLNHNVITLQNGITRNRLDLVFKGEGAECW 284
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
+ +++D++Q + + L+DH G+C +H L + V D
Sbjct: 285 CNG--CVIADKSQHVDNNTLIDHQVGHCN-------SHELYKYVLD 321
>gi|340776231|ref|ZP_08696174.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter aceti NBRC
14818]
Length = 433
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 28/339 (8%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQP-LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
+PF +L++ + +++ +L + LP ++ L + D P F +++
Sbjct: 12 EPFAARLSDVKGEDRKAAAGALARTGLPTPRVEAWHYTNLRALSGRVFADAPVGFDESA- 70
Query: 105 IKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD-G 163
+ + I P +++ A P LVL++G S L+ ++LP+GV S + D G
Sbjct: 71 -AQAALTRILPPDAAI-----AALPRLVLVNGRFAPS-LSSTDLPEGVSCTSFVQSPDFG 123
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
I+ S + G ++N A D GV A K + L L++ G + D
Sbjct: 124 ILA------SPDREG--MVALNTALADD-GVQITVAPGKQAGQLVLVSLAL-GTDSDVS- 172
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+PR + + EG + +IE E Y N VL I + + H +Q ++ N
Sbjct: 173 ---FHPRHSITLGEGASLSVIE-IAASENAGAYLHNPVLSCAIAEKAHLTHVKIQQEAEN 228
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
A H+ + Y+ + G L+RH VH G ++ LL + Q D+
Sbjct: 229 AVHLATVYADIAVRAAYDSFTLGLGSVLARHEVHATMHGNHAAVHVNGAQLLAASQVGDI 288
Query: 344 HSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 381
S + P RQ + +++ HS +AVF G V V R
Sbjct: 289 TSVIAHAAPDCISRQTVRNVLSDHS--RAVFQGKVLVER 325
>gi|444335325|ref|YP_007391694.1| cysteine desulfurase activator complex subunit [Blattabacterium sp.
(Blatta orientalis) str. Tarazona]
gi|444299704|gb|AGD97941.1| cysteine desulfurase activator complex subunit [Blattabacterium sp.
(Blatta orientalis) str. Tarazona]
Length = 431
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 148/341 (43%), Gaps = 28/341 (8%)
Query: 56 LEDSLPSSSSSLPQPLP-----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
L+D + SS SS + + + LR S L +PS DE ++ T+ + I + +
Sbjct: 3 LKDRIFSSLSSSKKNIHGESSYISSLRHKSIDIFLKKGFPSVTDEEWKNTNVNSILNQEY 62
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM----- 165
++ S + L+ +D +S L + DG Y S+ I
Sbjct: 63 NLFSKLSQQRKDLEYKKIKELIYLD----DSFLII--FIDGKYQSIYSHTSNNIRLSNLA 116
Query: 166 ----KRVSDFISE-FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
K++ DF + F + F +N + + D IY+P ++ PI + L + G ++
Sbjct: 117 SQEEKKIKDFYGKLFNLDEAFNILNTIFSKDGVYIYIPDNLFLKRPIEI--LHIYTG-IE 173
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
SK + NPR +++V + V IIE + + + NSV E+ ++ + +Q+
Sbjct: 174 SKIML--NPRNLIIVGKSSFVKIIEHHKCLKKH-LLFNNSVSEIYAFSNSQIEYYKIQDN 230
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ I T V+Q+ S S GK R+N++ G T + L LL +Q
Sbjct: 231 LDELSIIDNTFVKQDLRSKCSFYTFSFQGKFIRNNLNFSSHGKFTSSYLYGISLLSGEQL 290
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + + + QL+K I+ + +F+G + V++
Sbjct: 291 VDHHTSMEHLYSNAHSFQLYKNILWNK-SMGIFNGKILVDK 330
>gi|417121455|ref|ZP_11970883.1| FeS assembly protein SufD [Escherichia coli 97.0246]
gi|386148307|gb|EIG94744.1| FeS assembly protein SufD [Escherichia coli 97.0246]
Length = 423
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 36/305 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRY--- 93
Query: 142 ALNLSNLPDGVY-VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAG 200
+S L D + G + ++D + + D I ++F + A + I V G
Sbjct: 94 ---VSALSDAIEGSGYEVSINDD-RQGLPDAIQ----AEVFLHLTESLAQSVTHIAVKRG 145
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWAN 259
+ P+ L Y++ V +++ ++ R + + EG E +IE FV ND ++
Sbjct: 146 QRPAKPLLLMYIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTG 200
Query: 260 SVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
+ + + ++H L + S + AH TA + + GG + RHN
Sbjct: 201 ARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGAVLRHNT 257
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 374
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+
Sbjct: 258 STQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFN 314
Query: 375 GNVKV 379
G + V
Sbjct: 315 GLINV 319
>gi|161503531|ref|YP_001570643.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:- str.
RSK2980]
gi|160864878|gb|ABX21501.1| hypothetical protein SARI_01607 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 421
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 149/344 (43%), Gaps = 52/344 (15%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T SQ I
Sbjct: 4 LPNSSKALQQWRHLFEEQGESRTEEARQHLQQMLRLGLPTRKHEDWKYTPLDGFAHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQFAAISAAQRDALALKNDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVQPE-----IFLHLTESLAHCVTYIQVRRNQRPVKPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V G ++ + L + + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLSLAEGAEATVIEHYVS-HGEAKHFTGARLTMKVAENARLRHIKLT 219
Query: 279 NQSLNAAHIKWTAVRQET-ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
++ ++ H + T AS + + G + RH+ Q G + L+S + V
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHCFL-LGAAVLRHHTSTQLNGENATLRLNSLAMPVK 278
Query: 338 DQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
++ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 279 NEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|160887875|ref|ZP_02068878.1| hypothetical protein BACUNI_00278 [Bacteroides uniformis ATCC 8492]
gi|317477850|ref|ZP_07937036.1| FeS assembly protein SufD [Bacteroides sp. 4_1_36]
gi|423304182|ref|ZP_17282181.1| FeS assembly protein SufD [Bacteroides uniformis CL03T00C23]
gi|423310703|ref|ZP_17288687.1| FeS assembly protein SufD [Bacteroides uniformis CL03T12C37]
gi|156862561|gb|EDO55992.1| FeS assembly protein SufD [Bacteroides uniformis ATCC 8492]
gi|316905986|gb|EFV27754.1| FeS assembly protein SufD [Bacteroides sp. 4_1_36]
gi|392680973|gb|EIY74336.1| FeS assembly protein SufD [Bacteroides uniformis CL03T12C37]
gi|392685708|gb|EIY79022.1| FeS assembly protein SufD [Bacteroides uniformis CL03T00C23]
Length = 447
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 23/289 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVSTDAQFPSLVLIDGFIQ 139
+P+RK+E +++TD S + ++++ P DV + V+ D F
Sbjct: 42 FPTRKEEKYKYTDISKFFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
AL S+LP+GV GSL V++ V + + D + N A D + YV
Sbjct: 101 GRALPKSHLPEGVIFGSLKEVAEKHPDLVKKYYGKLADTAEDGVTAFNTAFAQDGVLFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+V+ + N RV++++EEG + ++ +G + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVNF----MVNRRVLIILEEGAQARLLVCDHAMDGVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
A V+E+ G+ L+ + I VRQE S L ++ +R+
Sbjct: 214 ATQVIEIFAGENAIFDFYELEETHTSTVRISNMYVRQEANSNVLLNGMTLHNGTTRNTTC 273
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 364
V G E L + ++D+ Q + + +DH P +L+K ++
Sbjct: 274 VTLAGEHAELNLCG--MAIADKNQHVDNHTTIDHAVPNCTSNELYKYVL 320
>gi|323343779|ref|ZP_08084006.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella oralis ATCC 33269]
gi|323095598|gb|EFZ38172.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella oralis ATCC 33269]
Length = 447
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 48/332 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
+ +RD + +PS+K E +++ D IQ I P L++
Sbjct: 26 MNAVRDKAFDDFQQLGFPSKKAERYKYID--------IQKIFEPDFGLNLRRLEMPLNPY 77
Query: 125 ---DAQFPSLVLIDGFIQNSAL-----NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ 176
P+L F+ N + + S LP+GV VGSL D K DFI ++
Sbjct: 78 EEFKCGVPNLDTSLYFVVNDSFYSKIRHGSPLPEGVIVGSL---RDETAKN-PDFIGKYY 133
Query: 177 CG------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
D ++N M A D ++YVP G KV+ + + +++ ++D + N R
Sbjct: 134 SKIAKTEEDAITALNTMLAQDGLLVYVPKGVKVDRAV--QVINILRSDID----LMLNRR 187
Query: 231 VVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
V+++VEE E+ ++ F +D + A V+EV + KG + L+ +
Sbjct: 188 VLIIVEEEAEIKLL--FCDDSADDRNFLATQVIEVYVAKGASLDLYCLEETHHKNTRVSN 245
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
V Q+ S ++ ++R+ + + G E + +++D+ Q + + L+
Sbjct: 246 VYVEQQANSRVNHNIITLHNGVTRNRLDLVFKGEGAECNCNG--CVIADKQQFVDNNTLI 303
Query: 350 DHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
DH G+C +L+K V F G V V
Sbjct: 304 DHQVGHCTSNELYK-YVLDDRATGAFAGRVVV 334
>gi|91976930|ref|YP_569589.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
gi|91683386|gb|ABE39688.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
Length = 437
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
LVL+DG + + +LS L G+ + SL D D + G+ ++N
Sbjct: 97 LVLVDGALAVALSDLSALEAGLSIRSLREALDA----GDDRLLSLDTGNPMTALNTALMT 152
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE--VGIIEEFV 248
D VI + G K+ P+++ +++ G S S LV G E ++E FV
Sbjct: 153 DGVVIDIADGAKLAKPLHIVHIA--SGGAPSAMFTRS------LVSLGKESAATVVESFV 204
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
EG Y + + +G ++ H L S +A +I VR + Y + V+TG
Sbjct: 205 AGEGAGVYQVHDTAVMTVGDRARLDHVRLIEDSRDAFNIASAEVRVGAHAHYSVAGVTTG 264
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
+SR+ + V G E + +LL Q D + L+++H +C R+ + +V
Sbjct: 265 ALVSRYQLVVNIAGEYARVETNGVNLLNGKQHAD--TTLVMNHDVPHCVSREGFRAVV-D 321
Query: 367 SLGQAVFDGNVKVNR 381
G +VF G + V +
Sbjct: 322 DRGHSVFQGRINVRQ 336
>gi|392978732|ref|YP_006477320.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392324665|gb|AFM59618.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 423
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 150/345 (43%), Gaps = 54/345 (15%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQT-----------LLSTPWPSRKDEPFRFTDTSMIKSS 108
LP+SS++L Q +L ++ QT +L P+RK E +++T + ++
Sbjct: 4 LPNSSNALQQ---WHRLFEAQGQTRSEQAQQHLQQMLRLGLPTRKHENWKYTPLDGLMNA 60
Query: 109 Q-------IQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVY-VGSLLGV 160
+ I P R + +L+V LV +DG + + L D G + +
Sbjct: 61 EFVSRLADINPTQRDALALNVDA----LRLVFVDGQFR------AELSDSTEDSGYTITI 110
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
D + E +F + A + I+V + P+ L +++ +D
Sbjct: 111 DDERQSLTAPVQPE-----VFLHLTESLAQSVTQIHVKRNQRPAKPLLLMHIT---QGLD 162
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRH---SY 276
++ ++ R + + EG E +IE +V ND ++ + L + + ++ H ++
Sbjct: 163 GDEINTAHYRHHLALAEGAEATVIEHYVSL--NDTRHFTGARLTMNVAANAQLHHIKLAF 220
Query: 277 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 336
QS + AH + A + + GG + RHN Q G +T ++S + V
Sbjct: 221 ENPQSHHFAHNDILLGQDAAAYSHSFL---LGGAVLRHNTSTQLNGENTTLRINSLAMPV 277
Query: 337 SDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 278 KSEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|187730455|ref|YP_001880441.1| cysteine desulfurase activator complex subunit SufD [Shigella
boydii CDC 3083-94]
gi|187427447|gb|ACD06721.1| FeS assembly protein SufD [Shigella boydii CDC 3083-94]
Length = 423
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L Y++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMYIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|345881417|ref|ZP_08832937.1| FeS assembly protein SufD [Prevotella oulorum F0390]
gi|343919656|gb|EGV30400.1| FeS assembly protein SufD [Prevotella oulorum F0390]
Length = 447
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 133/300 (44%), Gaps = 31/300 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM---------IKSSQIQPITRPSSSLDVS 123
L +RD + + +P++K E +++TD + +K I + + DV
Sbjct: 26 LNAVRDEAFADFKAQGFPTKKVERYKYTDMAALFAPDYGLNLKRLPIPVDPYETFTCDVP 85
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG----- 178
+ V+ DGF AL + LP+GV + SL + I D ++ + G
Sbjct: 86 NLSTSVYFVVNDGFY-TQALPQNKLPEGVIIDSL----NRIAAERPDLVAPYYAGLAQTK 140
Query: 179 -DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
D ++N M A D IYVP KV+ I + +++ +V+ + N RV++++EE
Sbjct: 141 DDAITALNTMLAQDGLFIYVPKRVKVDRTI--QVINILRADVE----LMVNRRVLLVLEE 194
Query: 238 GGEVGIIEEFVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
G E+ ++ F N + V+E +G+G ++ + L+ L + + Q+
Sbjct: 195 GAELKLL--FCDHAADNRRFLTTQVIEAYVGEGAQLELNCLEETHLKNTRVSNVYIDQQA 252
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
S ++ ++R+ + + G E + +++D++Q + + L+DH +C
Sbjct: 253 NSRVNHNVITLHNGITRNRLDLVFKGEGAECHCNG--CVIADKSQHVDNNTLIDHRVPHC 310
>gi|87301371|ref|ZP_01084212.1| ABC transporter, membrane component [Synechococcus sp. WH 5701]
gi|87284339|gb|EAQ76292.1| ABC transporter, membrane component [Synechococcus sp. WH 5701]
Length = 417
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
V+E +G+ +RH L A + AV QE S E V S G LSR V Q
Sbjct: 201 VIEAHLGRESTLRHGLLALGEGPACFLGQLAVEQEPRSQLESVWASHGWALSRFEPRVVQ 260
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
+ + T L + L Q D HSR+ P G QLHK I A G++VF+G VKV
Sbjct: 261 VDGEATTSLKALQLADGQQLADTHSRVEFRGPEGQLDQLHKAI-ADDRGRSVFNGAVKVP 319
Query: 381 R 381
R
Sbjct: 320 R 320
>gi|217970310|ref|YP_002355544.1| FeS assembly protein SufD [Thauera sp. MZ1T]
gi|217507637|gb|ACK54648.1| FeS assembly protein SufD [Thauera sp. MZ1T]
Length = 454
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 142/344 (41%), Gaps = 39/344 (11%)
Query: 63 SSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL 120
+++ LP LP L +LR+ + WP+ + E +R T + + + Q + +
Sbjct: 14 TAADLPGADLPWLVRLREDAIDRFADEGWPTTRRENWRHTSLAFM-AQQALAVRETVAPE 72
Query: 121 DVSTD-----------AQFPS-------------LVLIDGFIQNSALNLSNLPDGVYVGS 156
V D AQ P+ +V +DG + + LP GV +GS
Sbjct: 73 AVVADLRARYRAALGTAQDPARKAVESAGDDGHWVVFVDGHFAPALSAIGGLPGGVRIGS 132
Query: 157 LLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
L + V + G+ ++N A D I + G VE PI+L +L+
Sbjct: 133 LADALGQTPEAVEAAFGQAGDGEAPAALNAALAADGAWIRLGRGVAVEPPIHLVFLTA-- 190
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEF-VGKEGNDCYWANSVLEVVIGKGGKVRHS 275
V + L R +V+ E G + I+E + G G+ +V V+ + V H
Sbjct: 191 -TVADQHL-----RNLVVTEPGAQATIVEHYPAGAAGSTL--TTAVTRVLAAQDSHVTHL 242
Query: 276 YLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 335
LQ ++ A H+ Q + + +S G +L+R+++ + G E L+ +
Sbjct: 243 KLQQEAPEAIHLATIEAEQARGAVFASHSLSFGARLARNDIRTRLAGEGAEVLLNGLYHA 302
Query: 336 VSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ D H+R+ P+G R+ ++ ++ S + VF G + V
Sbjct: 303 DGRRHVDHHTRIDHARPQGTSREFYRGLIDGS-ARGVFTGRILV 345
>gi|82543949|ref|YP_407896.1| cysteine desulfurase activator complex subunit SufD [Shigella
boydii Sb227]
gi|81245360|gb|ABB66068.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 423
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L Y++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMYIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|420336220|ref|ZP_14837812.1| feS assembly protein SufD [Shigella flexneri K-315]
gi|391262865|gb|EIQ21877.1| feS assembly protein SufD [Shigella flexneri K-315]
Length = 423
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L Y++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMYIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|419925143|ref|ZP_14442991.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 541-15]
gi|420352606|ref|ZP_14853745.1| feS assembly protein SufD [Shigella boydii 4444-74]
gi|432533929|ref|ZP_19770908.1| FeS cluster assembly protein sufD [Escherichia coli KTE234]
gi|388387382|gb|EIL49000.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 541-15]
gi|391281855|gb|EIQ40493.1| feS assembly protein SufD [Shigella boydii 4444-74]
gi|431061415|gb|ELD70728.1| FeS cluster assembly protein sufD [Escherichia coli KTE234]
Length = 423
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L Y++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMYIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|399544971|ref|YP_006558279.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
gi|399160303|gb|AFP30866.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
Length = 428
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 137/318 (43%), Gaps = 19/318 (5%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP 129
P PL +LR L+ P P+RK E ++++ + S ++ S
Sbjct: 20 PGPLLELRKQKGIALVDMPLPTRKTENWKYSVRHLKLSDELAVALPSRGKKGTSLSTAGY 79
Query: 130 SLVLIDGFIQNSALNLSNLPD--GVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSIN 185
+V +G + A S+ PD G+ + + D +++ ++ +N
Sbjct: 80 RVVFRNGVMVPEA---SDFPDLNGIRIQRFCDLDDHAAAALAERLNNTLNSQTVQMAQLN 136
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D I + ++ P+++ + V + + + PR+ V ++ ++E
Sbjct: 137 SARFEDGLFIQLDKETVLDQPLFIIH------EVTASSVGSAYPRIYVDAARHSQMTLVE 190
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
E++ G++ N+V E V+ +G ++ L + + HI T VRQ TAS +E V
Sbjct: 191 EYISS-GSEPVMVNTVTEFVLAEGARITSVRLTLEGESVQHIGATGVRQATASRFESHCV 249
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCI 363
GG L RH++ ++ G E +L+ + Q D H+ ++H +C + ++ I
Sbjct: 250 GFGGPLRRHDLQLRLEGEGAECKLNGVVVTQGKQHYDNHTS--IEHIAAHCNSEETYRNI 307
Query: 364 VAHSLGQAVFDGNVKVNR 381
A A+F+G + +++
Sbjct: 308 AA-GQSHAIFNGRIHIHQ 324
>gi|417148469|ref|ZP_11988716.1| FeS assembly protein SufD [Escherichia coli 1.2264]
gi|417154884|ref|ZP_11993013.1| FeS assembly protein SufD [Escherichia coli 96.0497]
gi|417581149|ref|ZP_12231954.1| feS assembly protein SufD [Escherichia coli STEC_B2F1]
gi|432750137|ref|ZP_19984744.1| FeS cluster assembly protein sufD [Escherichia coli KTE29]
gi|345339772|gb|EGW72197.1| feS assembly protein SufD [Escherichia coli STEC_B2F1]
gi|386162127|gb|EIH23929.1| FeS assembly protein SufD [Escherichia coli 1.2264]
gi|386167973|gb|EIH34489.1| FeS assembly protein SufD [Escherichia coli 96.0497]
gi|431297054|gb|ELF86712.1| FeS cluster assembly protein sufD [Escherichia coli KTE29]
Length = 423
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + +++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAQLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|371775946|ref|ZP_09482268.1| FeS assembly protein SufD [Anaerophaga sp. HS1]
Length = 464
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 42/347 (12%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L E ++ SSS + L LR+ + + L PS K E +++T+ S
Sbjct: 18 LFEENRQTIEDSSSKV-----LNNLREQALEAFLKLGIPSNKVENYKYTNLQPYFSGDFS 72
Query: 112 -PITRPSS--------SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ P S DV T F ++ + N+ L LP+GV VGSL ++
Sbjct: 73 FSLNAPDFTGRMEDIFSCDVETLDSFTIFIVNGWYYSNNGSAL--LPEGVRVGSLAALA- 129
Query: 163 GIMKRVSDFISEFQCGDLFW------SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
K F+ ++ + W ++N M A D I++P G VE PI + + +
Sbjct: 130 ---KEDPSFVEKYYGKNAPWLSDGLVALNTMFARDGFYIHIPKGVVVEKPIQVVNILL-- 184
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKE--GNDCYWANSVLEVVIGKGGKVRH 274
S++ ++N R ++++EE E ++ V +D + N+V E + ++ +
Sbjct: 185 ----SEEPLMTNQRNLIVLEENSEARVL---VCDHTLSSDRFVVNNVTEGFVAPNARLDY 237
Query: 275 SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHL 334
LQNQ + V Q+ S + ++ + R+N+ ++ LG E +L
Sbjct: 238 YNLQNQHNATTQVAGLYVDQKENSYVKTNNLTLHTGVGRNNIVLKLLGKHAEGHAYGLYL 297
Query: 335 LVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
L D+ Q + + +DH P + +L K ++ A F G + V
Sbjct: 298 L--DKNQHVDNFSFIDHAVPECFSDELFKGVLDDH-ATAAFTGKIMV 341
>gi|333029423|ref|ZP_08457484.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
gi|332740020|gb|EGJ70502.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
Length = 447
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 139/336 (41%), Gaps = 33/336 (9%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI---- 105
I L E + S+SS + + +LR ++ +P++K E F++TD +
Sbjct: 8 IDLFSQSEKVINSNSSVI-----MNRLRKNAISDFEKQGFPTKKLEDFKYTDVAKFFEPD 62
Query: 106 KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSAL-----NLSNLPDGVYVGSLLGV 160
++ + P++ D P+L I+ F+ N S +PDGV GSL +
Sbjct: 63 YGINLKRLNIPANP-DSVFKCDVPNLNTIECFMVNDVFYPEVRKQSLIPDGVVFGSLKDL 121
Query: 161 SDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
D V + + D ++N A D ++Y+P +E PI L L N
Sbjct: 122 GDKYADIVEKYYGQLADTSKDAISALNTAFAQDGILLYIPKNVIIEEPIQLINLLRADVN 181
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--CYWANSVLEVVIGKGGKVRHSY 276
+ +SN R+++++E G + ++ + D + + V E+ +G+
Sbjct: 182 L------MSNRRLLIILERGAQAKML---ICNHAVDEVEFLSTGVTEIFVGENANFDFYE 232
Query: 277 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 336
L+ A V Q+ S L ++ +R+ + V+ LG + + +
Sbjct: 233 LEETHTRTARFNNVFVSQDANSNVLLNNMTLHNGATRNTIEVKLLGEGAHIDCHG--MAI 290
Query: 337 SDQTQDLHSRLLLDH--PRGYCRQLHKCIV-AHSLG 369
D+ Q + + L+DH P +L K ++ HS+G
Sbjct: 291 EDKNQHVDNTTLIDHVVPNCTSNELFKYVLDDHSVG 326
>gi|415843903|ref|ZP_11523726.1| feS assembly protein SufD [Shigella sonnei 53G]
gi|323169249|gb|EFZ54925.1| feS assembly protein SufD [Shigella sonnei 53G]
Length = 388
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 62/321 (19%)
Query: 84 LLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG-- 136
+L T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 1 MLRTGLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDA--VRLVFVDGRY 58
Query: 137 ------FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
I+ S +S LPD + L +++ + + V+
Sbjct: 59 VPALSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH-------------- 104
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
I V G + P+ L +++ V +++ ++ R + + EG E +I
Sbjct: 105 ----------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVI 151
Query: 245 EEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGY 300
E FV ND ++ + + + ++H L + S + AH TA +
Sbjct: 152 EHFVSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSH 209
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 358
+ GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQ
Sbjct: 210 SFL---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQ 264
Query: 359 LHKCIVAHSLGQAVFDGNVKV 379
LHK IV+ G+AVF+G + V
Sbjct: 265 LHKTIVSDK-GRAVFNGLINV 284
>gi|110805658|ref|YP_689178.1| cysteine desulfurase [Shigella flexneri 5 str. 8401]
gi|424838083|ref|ZP_18262720.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 5a str. M90T]
gi|110615206|gb|ABF03873.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|383467135|gb|EID62156.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 5a str. M90T]
Length = 388
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 138/321 (42%), Gaps = 62/321 (19%)
Query: 84 LLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG-- 136
+L T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 1 MLRTGLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDA--VRLVFVDGRY 58
Query: 137 ------FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
I+ S +S LPD + L +++ + + V+
Sbjct: 59 VPALSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH-------------- 104
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
I V G + P+ L +++ V +++ ++ R + + EG E +I
Sbjct: 105 ----------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVI 151
Query: 245 EEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGY 300
E FV ND ++ + + + ++H L + S + AH TA +
Sbjct: 152 EHFVSL--NDARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSH 209
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 358
+ GG + RHN Q G +++ ++S + V ++ D +R L+H +G+C RQ
Sbjct: 210 SFL---LGGAVLRHNTSTQLNGENSKLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQ 264
Query: 359 LHKCIVAHSLGQAVFDGNVKV 379
LHK IV+ G+AVF+G + V
Sbjct: 265 LHKTIVSDK-GRAVFNGLINV 284
>gi|333379412|ref|ZP_08471135.1| hypothetical protein HMPREF9456_02730 [Dysgonomonas mossii DSM
22836]
gi|332885278|gb|EGK05529.1| hypothetical protein HMPREF9456_02730 [Dysgonomonas mossii DSM
22836]
Length = 446
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 40/330 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-----ITRPSSSLD--VSTD 125
+ LRD + +P++K E + + D + ++ P I R + + V+
Sbjct: 25 MNGLRDKALNIFKDQGFPTKKMEDYLYLDVA----AEFLPDFALNINRLPFTGNPYVAFR 80
Query: 126 AQFPSLVLIDGFIQNSALNLS-----NLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCG 178
+ P+L F+ N + N P GV+VGS ++ D S++ Q
Sbjct: 81 CEIPNLTTNLYFVLNDIFHEEHKPKINYPSGVFVGSFKHFAE----EKPDVFSKYYGQIA 136
Query: 179 DL----FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D+ + N M A D VIYVP G VE PI L + N+ + N R++++
Sbjct: 137 DMDNNGIVAFNTMFAQDGFVIYVPKGVVVEEPIQLINILKSEFNI------LVNRRILII 190
Query: 235 VEEGGEVG-IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
E+ +V +I + E + A V E+ G+ + + L+ S + T V
Sbjct: 191 AEDDAQVKLLICDHTVDESQ--FLATQVTEIFAGRNALIDYYDLEENSDKVTRLTNTFVH 248
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
Q AS + ++ +SR+N +V+ G E + ++++D+ Q + + LDH
Sbjct: 249 QLEASNVLINNMTFNTGVSRNNYNVKLSGQHAEAYVCG--MVIADKHQYVDNFAFLDHLV 306
Query: 354 GYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
+C QL K ++ F G ++V +
Sbjct: 307 PHCTSTQLFKYVLQDE-ATGAFCGRIRVEK 335
>gi|299142246|ref|ZP_07035379.1| FeS assembly protein SufD [Prevotella oris C735]
gi|298576335|gb|EFI48208.1| FeS assembly protein SufD [Prevotella oris C735]
Length = 447
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 130/301 (43%), Gaps = 31/301 (10%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQ 127
PL +RD + + +P+RK E +++TD + + S + + P + D +
Sbjct: 25 PLNAVRDRAFADFKAQGFPTRKVERYKYTDMAALFSPDYGLNLNRLAIPVNPYD-AFKCD 83
Query: 128 FPSLVLIDGFIQNSALNLSNLPD-----GVYVGSLLGVSDGIMKRVSDFISEFQCG---- 178
P+L FI N + LP GV V SL ++ DFI+++
Sbjct: 84 VPNLSTSLYFIVNDSFYSQKLPQVQLPAGVIVDSLRHIA----AEKPDFIAKYYAQIAAT 139
Query: 179 --DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D ++N M A D +YVP KV+ I + +++ +VD + N RV+V++E
Sbjct: 140 HEDAVTALNTMLAQDGLFVYVPKNVKVDRTIQI--INILRADVD----LMVNRRVLVVME 193
Query: 237 EGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
+G E ++ F +D + + V+E +G + + L+ L + + Q+
Sbjct: 194 QGAEAKLL--FCDHATDDRKFLSTQVIEAYVGDNASLELNCLEETHLKNVRVSNVYIEQQ 251
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S ++ ++R+ + + G E + +V+D+ Q + + L+DH +
Sbjct: 252 ANSRVNHNVITLHNGVTRNRLDLVFKGEGAECHCNG--CVVADKQQHVDNNTLIDHQVPH 309
Query: 356 C 356
C
Sbjct: 310 C 310
>gi|218131829|ref|ZP_03460633.1| hypothetical protein BACEGG_03450 [Bacteroides eggerthii DSM 20697]
gi|217986132|gb|EEC52471.1| FeS assembly protein SufD [Bacteroides eggerthii DSM 20697]
Length = 447
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 21/279 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKVEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++D + V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEMADRHPELVRKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ +V+ + N RV+V++EEG + ++ + + +
Sbjct: 161 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLVILEEGAQARLLACDHAMDSVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
A V+EV +G+ L+ + I V+QE S L ++ +R+
Sbjct: 214 ATQVIEVFVGENATFDFYELEETHTSTVRISALYVKQEANSNVLLNGMTLHNGTTRNTTE 273
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 274 VTLAGEGAELNLCG--MAIADKNQHVDNNTTIDHAVPNC 310
>gi|312969706|ref|ZP_07783889.1| feS assembly protein SufD [Escherichia coli 1827-70]
gi|310337991|gb|EFQ03080.1| feS assembly protein SufD [Escherichia coli 1827-70]
Length = 423
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLAHDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|418043876|ref|ZP_12682028.1| FeS assembly protein SufD [Escherichia coli W26]
gi|383473293|gb|EID65320.1| FeS assembly protein SufD [Escherichia coli W26]
Length = 407
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 23 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 80
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 81 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 130
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 131 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 185
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + +++H L + S + AH TA + + GG + RHN
Sbjct: 186 RFTINVAANAQLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 242
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 243 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 299
Query: 376 NVKV 379
+ V
Sbjct: 300 LINV 303
>gi|385788274|ref|YP_005819383.1| FeS assembly protein SufD [Erwinia sp. Ejp617]
gi|310767546|gb|ADP12496.1| FeS assembly protein SufD [Erwinia sp. Ejp617]
Length = 426
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 134/308 (43%), Gaps = 26/308 (8%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSS---LDVSTDAQFPSLVLID 135
Q LL P+RK E +++T + ++Q +P + + L + DA LV ID
Sbjct: 35 QQLLRAGLPTRKQEDWKYTPLDQLLNNQFVLPEPAALDAEAIKALALPIDA--VRLVFID 92
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G L D + + ++ +R +SE ++F + A + +I
Sbjct: 93 GRFS------PELSDSEHDLFTIQMAQAAERRE---LSEPVHPEVFLHLTESLAEQVTLI 143
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+ G P+Y +L + G+ + +L S+ R + ++E E +IE +V + +
Sbjct: 144 QLARGKAAARPLY--FLHISSGS-STGELNTSHYRHHLQLDEAAEATVIEHYVSLDA-EP 199
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
++ + +G + H L + + H + E + + G L+RH+
Sbjct: 200 HFTGARFTAEVGNNAALTHYNLAFEDCRSYHFSHNDLTLERDTRVQSHSFLLGAGLTRHH 259
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVF 373
+ G ++ ++S L + + D SR L+H +GYC RQLHK IV +AVF
Sbjct: 260 TSTRLNGEGSDLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV-RDRARAVF 316
Query: 374 DGNVKVNR 381
+G +KV +
Sbjct: 317 NGIIKVAK 324
>gi|417232090|ref|ZP_12033488.1| FeS assembly protein SufD [Escherichia coli 5.0959]
gi|386205089|gb|EII09600.1| FeS assembly protein SufD [Escherichia coli 5.0959]
Length = 423
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 36/305 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRY--- 93
Query: 142 ALNLSNLPDGVY-VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAG 200
+S L D + G + ++D + + D I ++F + A + I V G
Sbjct: 94 ---VSALSDAIEGSGYEVSINDD-RQGLPDAIQ----AEVFLHLTESLAQSVTHIAVKRG 145
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWAN 259
+ P+ L Y++ V +++ ++ R + + EG E +IE FV ND ++
Sbjct: 146 QRPAKPLLLMYIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTG 200
Query: 260 SVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
+ + + ++H L + S + AH TA + + GG + RHN
Sbjct: 201 ARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNT 257
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 374
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+
Sbjct: 258 STQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFN 314
Query: 375 GNVKV 379
G + V
Sbjct: 315 GLINV 319
>gi|317474555|ref|ZP_07933829.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
gi|316909236|gb|EFV30916.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
Length = 447
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 21/279 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKVEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++D + V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEMADRHPELVRKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ +V+ + N RV+V++EEG + ++ + + +
Sbjct: 161 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLVILEEGAQARLLACDHAMDSVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
A V+EV +G+ L+ + I V+QE S L ++ +R+
Sbjct: 214 ATQVIEVFVGENATFDFYELEETHTSTVRISALYVKQEANSNVLLNGMTLHNGTTRNTTE 273
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 274 VTLAGEGAELNLCG--MAIADKNQHVDNNTTIDHAVPNC 310
>gi|419391593|ref|ZP_13932408.1| feS assembly protein SufD [Escherichia coli DEC15A]
gi|419396590|ref|ZP_13937366.1| feS assembly protein SufD [Escherichia coli DEC15B]
gi|419401998|ref|ZP_13942723.1| feS assembly protein SufD [Escherichia coli DEC15C]
gi|419407141|ref|ZP_13947832.1| feS assembly protein SufD [Escherichia coli DEC15D]
gi|419412675|ref|ZP_13953331.1| feS assembly protein SufD [Escherichia coli DEC15E]
gi|378238317|gb|EHX98318.1| feS assembly protein SufD [Escherichia coli DEC15A]
gi|378246746|gb|EHY06666.1| feS assembly protein SufD [Escherichia coli DEC15B]
gi|378247857|gb|EHY07772.1| feS assembly protein SufD [Escherichia coli DEC15C]
gi|378255391|gb|EHY15249.1| feS assembly protein SufD [Escherichia coli DEC15D]
gi|378259540|gb|EHY19352.1| feS assembly protein SufD [Escherichia coli DEC15E]
Length = 423
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGTEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
L + + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RLTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|424870814|ref|ZP_18294476.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393166515|gb|EJC66562.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 424
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 137/326 (42%), Gaps = 20/326 (6%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPI 113
+L ++ LP + LRD L P+R+ E + +TD +++++ Q
Sbjct: 15 ALIEAFNQQIGELPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLRTVPQQAG 74
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
S SL+ D L +I G N + L Y LL DG + +
Sbjct: 75 DAGSQSLEPLVD-DATVLAVIQGH-SNQKATVDGLGVSAYSERLL---DG---SAAGGLD 126
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
D ING D V+ VPA ++ENP+ ++++ GG + ++ LP+S
Sbjct: 127 ALGSDDAVGRINGSFVRDGYVLDVPADTELENPLEIQFIHA-GGQIHTR-LPVS------ 178
Query: 234 LVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
G + +IE + G D + V ++ +G+G ++ LQ Q + H+ +
Sbjct: 179 -FGAGVKATVIERHLTVTG-DAALVSHVSDITVGEGTELTWIILQQQGADDTHLGQIRID 236
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
+ L ++ GGKL R +H++ G + L +LL ++ D+ L D P
Sbjct: 237 LGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPN 296
Query: 354 GYCRQLHKCIVAHSLGQAVFDGNVKV 379
++ + +V + VF G ++V
Sbjct: 297 TGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|300770537|ref|ZP_07080416.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
gi|300763013|gb|EFK59830.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
Length = 446
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 155/349 (44%), Gaps = 35/349 (10%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-S 103
+D QL + ++ +S + + L KLR + +P+ K+E +++T+ S
Sbjct: 18 ADSLFQQLVDGFQEQKNAS-----ETVALTKLRQDAFDKFRQVGFPTVKNEDWKYTNVHS 72
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLL 158
++ + + LD S A P L +L++G L S+L + + + ++
Sbjct: 73 LVNKTYVLNPDVDIDGLDFSK-ADIPDLDAHRIILVNG---QYVLAFSSLEEEIGL-TVK 127
Query: 159 GVSDGIMKRVSDFISEF-QCGDL----FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
+ D + +F + F Q D F ++N I V G ++ PI++ +++
Sbjct: 128 PIDDAAQE--GNFSAHFAQYADKTQNPFVALNTALYTSGLYIDVAKGKALQKPIHIVHVA 185
Query: 214 VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVR 273
+ + R ++++E E IIE F+ +G+ N V E+V+ + K++
Sbjct: 186 TGAEDF------FTQTRNLIVLEPNAEAEIIESFITLDGSAKNVQNKVTEIVVQENAKLQ 239
Query: 274 HSYLQNQSLNAAHIKWTAVRQETASGYELVEVST-GGKLSRHNVHVQQLGPDTETELSSF 332
H YLQ + + ++ T V QE S Y + G R++++V+ E+ L
Sbjct: 240 HYYLQVSASVSHYLNHTEVYQEKYSLYNNYNCNFPGASFVRNDINVRLDAEYVESHLYGI 299
Query: 333 HLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKV 379
+L +Q D H+ ++DH + +C + +K I AVF+G + V
Sbjct: 300 NLTADNQFVDNHT--VVDHMKPHCESYEWYKNI-PQDTSTAVFNGKIFV 345
>gi|422368546|ref|ZP_16448958.1| FeS assembly protein SufD [Escherichia coli MS 16-3]
gi|432898598|ref|ZP_20109290.1| FeS cluster assembly protein sufD [Escherichia coli KTE192]
gi|433028552|ref|ZP_20216414.1| FeS cluster assembly protein sufD [Escherichia coli KTE109]
gi|315299723|gb|EFU58963.1| FeS assembly protein SufD [Escherichia coli MS 16-3]
gi|431426250|gb|ELH08294.1| FeS cluster assembly protein sufD [Escherichia coli KTE192]
gi|431543661|gb|ELI18627.1| FeS cluster assembly protein sufD [Escherichia coli KTE109]
Length = 423
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EGGE +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGGEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|398801400|ref|ZP_10560643.1| FeS assembly protein SufD [Pantoea sp. GM01]
gi|398091957|gb|EJL82380.1| FeS assembly protein SufD [Pantoea sp. GM01]
Length = 425
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QP---ITRPSSSLDVSTDAQFPSLVLID 135
Q L+ P+RK E +++T + + Q QP T +L + DA LV +D
Sbjct: 35 QQLMRVGLPTRKHENWKYTPLDGLLAQQFVLPQPQEVSTEQVDALALPIDA--VRLVFVD 92
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G Q LS+ G L + + Q ++F + A + I
Sbjct: 93 GRFQ---AELSSRDTG-----LFDIQHAQASERRPLPAPIQP-EVFLHLTESLAEEATTI 143
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND- 254
+ G P+YL +++ G + + + + R + +E E +IE +V ND
Sbjct: 144 RLARGKSAAKPLYLLHIT-SGQDAGTNTV---HHRHHLQLEASAEAEVIEHYVTL--NDV 197
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++ + + K++H L +S + H V + G LSRH
Sbjct: 198 AHFTGARFTFDVADNAKLQHIKLSFESEKSYHFAHNDVVMGRDANVSTTSFLLGAGLSRH 257
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
N Q G +T ++S L V+ + D +R L+H +G+C RQ+HK ++A G+AV
Sbjct: 258 NTSAQLNGENTNLAINSLSLPVNQEVCD--TRSYLEHNKGHCISRQMHK-VIARDKGRAV 314
Query: 373 FDGNVKV 379
F+G +KV
Sbjct: 315 FNGMIKV 321
>gi|312881813|ref|ZP_07741587.1| FeS assembly protein SufD [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370564|gb|EFP98042.1| FeS assembly protein SufD [Vibrio caribbenthicus ATCC BAA-2122]
Length = 423
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 36/326 (11%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK----SSQIQPITRPSSSLDV 122
+P+P + + + +P+ K E +++T + + S Q + I + +
Sbjct: 17 MPKPNMISEYAERHWDLAKQVGFPTPKHEDWKYTSLTDFRDIDFSHQAETIPTQADIDKL 76
Query: 123 STDAQFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLF 181
+ DA+ +V ++G FI LS++ D Y +LL + +R+ I+ + F
Sbjct: 77 AIDAETSRIVFVNGRFISE----LSDIDDPHYRLTLL--DENAKQRLPKPINP----EFF 126
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYL-KYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
+ + I + C V PIYL +S G + +K+ ++ +G +
Sbjct: 127 LHMTEASTRETLHIEIAKNCVVSKPIYLLNIVSRPYGGMSQQKIHVTQG-------QGSQ 179
Query: 241 VGIIEEFVGKEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV---RQE 295
V IIE + D +++ S L + + + H L S H + R
Sbjct: 180 VKIIEHLICDNLQDTSAHYSGSRLVMDVADNAGLDHYKLCFASDTHFHFGHNDIFIGRDA 239
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
+ + + G+L+RH+ Q G ++ +++S L QT D SR L+H +G+
Sbjct: 240 KVASHTFL---FSGQLTRHHTSSQLNGENSHIDINSLTLPRKSQTYD--SRTYLEHNKGH 294
Query: 356 C--RQLHKCIVAHSLGQAVFDGNVKV 379
C RQ+HK I + S +AVF+G +KV
Sbjct: 295 CTSRQIHKVIASES-SKAVFNGMIKV 319
>gi|282892126|ref|ZP_06300601.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498021|gb|EFB40365.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 434
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 146/345 (42%), Gaps = 34/345 (9%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
ES SL + ++ L+K+R + L P+ +++ FR+ + +
Sbjct: 10 ESFHSSLEEAFRNVAGDPLLKKIRQKAWDHFLELGLPTPRNDVFRYVPLRKLFAHTYATA 69
Query: 114 TRPSSSLDVSTDAQFPS-------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
P +LD + A F + LV ++G+ S ++S LP V V L + ++
Sbjct: 70 LTP--ALDKAKIADFIAPECIHSVLVFVNGYYVPSLSDISGLPTKVVVTPL----EQAIR 123
Query: 167 RVSDFISE------FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
F++ + D F +N D +Y+P +VE PI + + +D
Sbjct: 124 SFGAFLTNQWGKTLMEETDPFAILNAAIHTDGIFVYIPPRLQVEKPIQILEI------MD 177
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
++ +S PR+ V E+ ++ +G YW N V + I + VR++ +
Sbjct: 178 TEVPFMSMPRLHFFVGAQSELNVLST-LGSLSGSTYWVNQVADFSIEEQAHVRYTQ-TSY 235
Query: 281 SLNAAHIKWTAVRQ--ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
L + T+ R + S + V + G +RH+ V G + EL+ L D
Sbjct: 236 PLPPECWQMTSTRAYLKKNSTFLAVHATEGSTTARHDYRVVLNGENAHAELNGAWTL--D 293
Query: 339 QTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
+ ++ H+ +L+DH C+ QL K I+ S + F+G + V +
Sbjct: 294 EKREAHTHVLVDHQSPNCQSLQLFKGILNGS-SHSSFEGKILVRQ 337
>gi|78213790|ref|YP_382569.1| Iron-regulated ABC transporter permease SufD [Synechococcus sp.
CC9605]
gi|78198249|gb|ABB36014.1| ABC transporter, membrane component [Synechococcus sp. CC9605]
Length = 392
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 25/294 (8%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITR--PSSSLDVSTDAQFPSLVLIDGFIQNSALNLSN 147
P+R+ EP+R TD + + P++ PS+SL S D + ++++GF + L
Sbjct: 23 PNRRQEPWRLTDLKRLAAVSELPVSASPPSTSLPASLDG--VTRLMLNGF--DDPLAGQV 78
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
LP+G+ + ++ + + + + C + W + A ++ + +V P+
Sbjct: 79 LPEGITALN----AEELEQALGHTLDRCGCAQV-WPVELNHAKAQQILALRVRGRV-GPL 132
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
L + G N RV++L+EE E+ +++ + EG + + VLEV +G
Sbjct: 133 ELVLAAGAGLNAT---------RVLLLLEEKAELELMQVLLA-EGASAH--SHVLEVHLG 180
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 327
+ ++RH L ++ + AV QE S Y L V G L R V Q+ ET
Sbjct: 181 QEAQLRHGVLATADGVSSLMAHLAVEQEPRSSYALTSVVQGWNLGRVEPRVVQVDGQAET 240
Query: 328 ELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L + + Q H+ + D P G QL KC+ A A+F+G + V R
Sbjct: 241 VLKGLAVTGAKQQLATHTAVRFDGPEGELDQLQKCL-AGGQSHAIFNGAISVPR 293
>gi|183598856|ref|ZP_02960349.1| hypothetical protein PROSTU_02288 [Providencia stuartii ATCC 25827]
gi|386745208|ref|YP_006218387.1| cysteine desulfurase activator complex subunit SufD [Providencia
stuartii MRSN 2154]
gi|188021063|gb|EDU59103.1| FeS assembly protein SufD [Providencia stuartii ATCC 25827]
gi|384481901|gb|AFH95696.1| cysteine desulfurase activator complex subunit SufD [Providencia
stuartii MRSN 2154]
Length = 434
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 40/300 (13%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS 146
TP S + +RF + + + + +L + DA +VL+DG ++ LS
Sbjct: 66 TPLHSVLNTHYRFAEQDLDE--------KACEALALPIDAY--RIVLVDGRYSST---LS 112
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENP 206
++ G + +LL D + V+ ++F + A VI++ A + P
Sbjct: 113 SIDMGPFQVALLDSQDMLPDAVN--------SEIFLHLTESLAQQPIVIHLGANQIAQKP 164
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
+YL L++ G+ D + S R + ++ + +IE FV + ++ L V +
Sbjct: 165 LYL--LNISSGS-DGDTVNTSQYRYHITLDANSKAQVIEHFVSF-NDKAHFTGGRLTVEV 220
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELVEVSTGGKLSRHNVHVQQL 321
G + +H L N++ A H + Q +S + L GG L+RH+ Q +
Sbjct: 221 GDNAQYQHFKLNNENNVAQHFAHNDIVVGRDSQVLSSSFLL-----GGALTRHHTSAQLM 275
Query: 322 GPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
G + L+S LL+ ++ + +R L+H G C RQLHK ++A +AVF+G +KV
Sbjct: 276 GENGHFSLNS--LLLPKDSEIVDTRTYLEHNVGQCESRQLHK-VIAMDGSKAVFNGMIKV 332
>gi|428989969|ref|ZP_19059017.1| feS assembly protein SufD [Escherichia coli 93.0056]
gi|428995743|ref|ZP_19064425.1| feS assembly protein SufD [Escherichia coli 94.0618]
gi|429826439|ref|ZP_19357577.1| feS assembly protein SufD [Escherichia coli 96.0109]
gi|427245084|gb|EKW12386.1| feS assembly protein SufD [Escherichia coli 93.0056]
gi|427248058|gb|EKW15103.1| feS assembly protein SufD [Escherichia coli 94.0618]
gi|429255382|gb|EKY39711.1| feS assembly protein SufD [Escherichia coli 96.0109]
Length = 388
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 139/314 (44%), Gaps = 48/314 (15%)
Query: 84 LLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFI 138
+L T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 1 MLRTGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG-- 56
Query: 139 QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPD 191
YV +L ++G VS I++ + G ++F + A
Sbjct: 57 -------------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQS 101
Query: 192 LGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKE 251
+ I V G + P+ L +++ V +++ ++ R + + EG E +IE FV
Sbjct: 102 VTHIAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLELAEGAEATVIEHFVSL- 157
Query: 252 GNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVST 307
ND ++ + + + ++H L + S + AH TA + +
Sbjct: 158 -NDARHFTGARFSINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---L 213
Query: 308 GGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVA 365
GG + RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 214 GGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVS 271
Query: 366 HSLGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 272 DK-GRAVFNGLINV 284
>gi|416346707|ref|ZP_11679798.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
EC4100B]
gi|320197865|gb|EFW72473.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
EC4100B]
Length = 354
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|182677102|ref|YP_001831248.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632985|gb|ACB93759.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
Length = 444
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 144/340 (42%), Gaps = 30/340 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQP 112
+L +S + ++LP + KLR+ + + P R+ E + +TD T M ++ + P
Sbjct: 15 TLVESFGAVKATLPGTADVAKLREENFAAFVEAGLPHRRVESWHYTDLRTIMREALPLAP 74
Query: 113 ITRPSSSLDVSTDA-----QFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGV-SDGIM 165
+ P++ + D LVL+DG F+ + +P GV V SL V + G
Sbjct: 75 VPTPAALEGLRKDVGALTLHGTKLVLVDGAFVPELS---DTVPAGVTVHSLASVLTKGPA 131
Query: 166 KRVSDFISE-FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+ ++ E GD ++N D V+ V G + P+ L Y + + +
Sbjct: 132 ELLTLLSGEGLGAGDAIVALNAAMMQDGIVVEVAPGAVIAEPLNLIYAT-------ASAM 184
Query: 225 PISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL- 282
P++ R +V V V I E +G EG N L +G KV H+ SL
Sbjct: 185 PVARFSRSLVAVGAKASVTIAESSLG-EGGRSGQTNGCLIFSVGDEAKVNHTTQLTGSLA 243
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
N+ I V ++ + +G L+R + ++ G + E L LL + D
Sbjct: 244 NSIRIDTFMVSLGAKVKFDSFALVSGAGLTRRQIFLRFNGEEAEAALRGASLLRGREYAD 303
Query: 343 LHSRLLLDHPRGYC--RQLHKCIV-AHSLGQAVFDGNVKV 379
+ L ++H C R+L K I+ S+G VF G + V
Sbjct: 304 --TTLFVEHLAPSCVGRELFKYILDEESVG--VFQGKIHV 339
>gi|423139795|ref|ZP_17127433.1| FeS assembly protein SufD [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379052349|gb|EHY70240.1| FeS assembly protein SufD [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 423
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 36/336 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGVTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
Q S++ L + DA LV +DG + L D G +
Sbjct: 64 QQFAAISAAQRDALALQIDA--VRLVFVDGRF------MPELSDSTQDS---GFDVSVRD 112
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+ Q ++F + A + I V + P+ L +++ VDS +L
Sbjct: 113 ERQTLAAPVQ-PEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QGVDSDELNT 168
Query: 227 SNPRVVVLVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
++ R + + EG E +IE +V E ++ + L V + + ++RH L ++ ++
Sbjct: 169 AHYRHHLALAEGAEATVIEHYVSLTEAK--HFTGARLTVKVAENAQLRHIKLAFENASSY 226
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
H + T + G + RH+ Q G + L+S + V ++ D +
Sbjct: 227 HFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--T 284
Query: 346 RLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 285 RTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|408372893|ref|ZP_11170592.1| ABC transporter permease [Alcanivorax hongdengensis A-11-3]
gi|407767245|gb|EKF75683.1| ABC transporter permease [Alcanivorax hongdengensis A-11-3]
Length = 408
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 129/300 (43%), Gaps = 34/300 (11%)
Query: 83 TLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA 142
L +T +P RK E +++T + + + + L A S+V I+ N
Sbjct: 32 ALEATRFPERKTERWKYTSVQALADGHLNAVA--AGDLRQPLPALSESVVTIN----NGE 85
Query: 143 LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCK 202
L S+LPDGV + G+ + +++ V+ V A +
Sbjct: 86 LVTSSLPDGVTLHHNAPAVAGL--------------ETPFAVYNSAVARAVVLEVAANTR 131
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
+E PI+++ + S NPRV+V + G E +IE + G EG N+V
Sbjct: 132 IEQPIHVQIQAA------SDAPAHCNPRVIVKLNNGAEATVIEHYHG-EGQ--ALTNAVT 182
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
++ + H LQ ++ + HI + Q+ S + ++ TG +L R++VH L
Sbjct: 183 ALITADNAHLTHYRLQGEAASTLHIGTLIIDQQGISQVDSYQLMTGNRLRRNDVHA--LV 240
Query: 323 PDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVN 380
+ EL+ + V + ++L ++H C+ Q K + + G+AVF+G + ++
Sbjct: 241 GKSGAELTMKGIFVVRDKSHVDNQLCVEHRVPDCQSDQNFKGLAGEN-GKAVFNGRIHIH 299
>gi|190573179|ref|YP_001971024.1| hypothetical protein Smlt1154 [Stenotrophomonas maltophilia K279a]
gi|190011101|emb|CAQ44710.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 420
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 137/319 (42%), Gaps = 12/319 (3%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVS 123
S+ Q R L P+ ++E +++T + ++ P+ P+ +
Sbjct: 7 SMAQAFCGSDARREVLDAALRDGLPAARNEAWKYTSLRQLERRAFAAAPLQGPALDAALL 66
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFW 182
D P LV ++G + + ++ +LP GV + L V ++ ++F
Sbjct: 67 EDIPAPRLVFVNGRLDAALSDVQSLPAGVQLQPLSAALASGEDAVRFLGRRYERSEEIFA 126
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N A + V+ V G +VE P+ L + SV G D + R ++ + G +G
Sbjct: 127 RLNAALADEGVVLRVEEGVQVEAPLQLVFASV-AGETDLAW----HHRHLIELRAGASLG 181
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E G+ + N+VL + + ++H+ +Q S T + Y
Sbjct: 182 VVEHRFSV-GDSAHLDNTVLHAHVARDAVLKHARVQAGSARQTSFLRTDAVLARDAQYHR 240
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHK 361
V++ G LSRH ++V+ G +L++ +L+ + + + +RL +DH R +L
Sbjct: 241 VDLELGAALSRHELNVRLEG--DSAQLTANGVLLGNGRRHVETRLGIDHIARDTSCELLW 298
Query: 362 CIVAHSLGQAVFDGNVKVN 380
VA + + VF G +++
Sbjct: 299 RGVAANRSRVVFHGGIQIR 317
>gi|419221373|ref|ZP_13764308.1| feS assembly protein SufD [Escherichia coli DEC8E]
gi|378067933|gb|EHW30044.1| feS assembly protein SufD [Escherichia coli DEC8E]
Length = 423
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|309793447|ref|ZP_07687874.1| FeS assembly protein SufD [Escherichia coli MS 145-7]
gi|308123034|gb|EFO60296.1| FeS assembly protein SufD [Escherichia coli MS 145-7]
Length = 423
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVFRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|365122292|ref|ZP_09339196.1| FeS assembly protein SufD [Tannerella sp. 6_1_58FAA_CT1]
gi|363642792|gb|EHL82132.1| FeS assembly protein SufD [Tannerella sp. 6_1_58FAA_CT1]
Length = 447
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 134/314 (42%), Gaps = 26/314 (8%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQ 111
L D S S P+ L LR+ + T +PS DE ++ T+ + + +
Sbjct: 10 LYDQYHSLIDSHASPI-LNALREKAMSDFRVTGFPSPNDEEYKHTNIPDLFAPDYGLNLN 68
Query: 112 PITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS-----NLPDGVYVGSLLGVSDGIMK 166
+ P + +V P+L + F+ N + LP+GV +GSL ++
Sbjct: 69 RLEIPVNPYEVFR-CDVPNLSTLLYFVVNDSFYTKENPKVKLPEGVLIGSLNEMARSHPD 127
Query: 167 RVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
V + + C D ++N D +YVP G +E PI L +++ G+ D
Sbjct: 128 LVQRYYGKQACTQNDGIVALNTAFVQDGFFLYVPKGVIIEKPIQL--INILRGDADF--- 182
Query: 225 PISNPRVVVLVEEGGEVGII--EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+ N R+++++EEG + ++ + + K+ + ++ V E+ GK + ++ SL
Sbjct: 183 -MVNRRLLIILEEGAQARLLVCDHTMDKKK---FLSSQVTEIYAGKNAVFDYYDIEESSL 238
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
N I T V Q S + ++ +R+N + G E L + ++D+ Q
Sbjct: 239 NTNRITSTFVDQAEKSNVLINGITLHNGTTRNNYRMTFSGEHAEAHLCG--MAIADKKQS 296
Query: 343 LHSRLLLDHPRGYC 356
+ + +DH +C
Sbjct: 297 VDNHTFIDHAVPHC 310
>gi|440287373|ref|YP_007340138.1| FeS assembly protein SufD [Enterobacteriaceae bacterium strain FGI
57]
gi|440046895|gb|AGB77953.1| FeS assembly protein SufD [Enterobacteriaceae bacterium strain FGI
57]
Length = 424
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 149/338 (44%), Gaps = 35/338 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS++L Q L + + Q +L P+RKDE +++T + SSQ +
Sbjct: 4 LPNSSNALQQWHHLFEAQGEQRSPQAREHLQQVLRLGLPTRKDEDWKYTALDRLLSSQFV 63
Query: 111 QPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
P R ++ D++ D+ + LV +DG L DG+ V + +
Sbjct: 64 AP--RLTTLEDIAPDSLALTVDAWRLVFVDGQFA------PGLSDGLEESGFKVVVNNVR 115
Query: 166 KRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+ + ++ ++F + A + I V + P+ L +++ + +++
Sbjct: 116 EDLPAAVN----SEIFLHLTESLAATVTHIRVARNQRPAKPLLLMHIT---RGLVGEEMN 168
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
++ R + +E G E +IE +V + ++ + + + + H L ++ +
Sbjct: 169 TAHYRHHIALETGAEATVIEHYVSL-NDQRHFTGARFTMDVADNAHLHHLKLGFENPQSF 227
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
H +R + G ++RH+ Q G +T ++S + V+ + D +
Sbjct: 228 HFAHNDIRLGQDASAHSSSFLLGAAITRHHTSSQLNGENTTLRMNSLAMPVNTEVCD--T 285
Query: 346 RLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
R L+H +GYC RQLHK IV+ G+AVF+G + V +
Sbjct: 286 RTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINVAK 322
>gi|270294862|ref|ZP_06201063.1| FeS assembly protein SufD [Bacteroides sp. D20]
gi|270274109|gb|EFA19970.1| FeS assembly protein SufD [Bacteroides sp. D20]
Length = 447
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 23/289 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVSTDAQFPSLVLIDGFIQ 139
+P+RK+E +++TD S + ++++ P DV + V+ D F
Sbjct: 42 FPTRKEEKYKYTDISKFFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
AL S+LP+GV GSL V+ V + + D + N A D + YV
Sbjct: 101 GRALPKSHLPEGVIFGSLKEVAGKHPDLVKKYYGKLADTAEDGVTAFNTAFAQDGVLFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+V+ + N RV++++EEG + ++ +G + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVNF----MVNRRVLIILEEGAQARLLVCDHAMDGVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
A V+E+ G+ L+ + I V+QE S L ++ +R+
Sbjct: 214 ATQVIEIFAGENAIFDFYELEETHTSTVRISNMYVKQEANSNVLLNGMTLHNGTTRNTTR 273
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV 364
V +G E L + ++D+ Q + + +DH P +L+K ++
Sbjct: 274 VTLVGEHAELNLCG--MAIADKNQHVDNHTTIDHAVPNCTSNELYKYVL 320
>gi|432531052|ref|ZP_19768082.1| FeS cluster assembly protein sufD [Escherichia coli KTE233]
gi|431054993|gb|ELD64557.1| FeS cluster assembly protein sufD [Escherichia coli KTE233]
Length = 423
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS-----SLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I S +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAEEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|191167839|ref|ZP_03029644.1| FeS assembly protein SufD [Escherichia coli B7A]
gi|193068886|ref|ZP_03049845.1| FeS assembly protein SufD [Escherichia coli E110019]
gi|209918995|ref|YP_002293079.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SE11]
gi|218554247|ref|YP_002387160.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli IAI1]
gi|218695242|ref|YP_002402909.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 55989]
gi|260855505|ref|YP_003229396.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. 11368]
gi|260868172|ref|YP_003234574.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300820072|ref|ZP_07100248.1| FeS assembly protein SufD [Escherichia coli MS 107-1]
gi|300821446|ref|ZP_07101593.1| FeS assembly protein SufD [Escherichia coli MS 119-7]
gi|300924716|ref|ZP_07140662.1| FeS assembly protein SufD [Escherichia coli MS 182-1]
gi|307310748|ref|ZP_07590394.1| FeS assembly protein SufD [Escherichia coli W]
gi|331668365|ref|ZP_08369213.1| FeS assembly protein SufD [Escherichia coli TA271]
gi|331677552|ref|ZP_08378227.1| FeS assembly protein SufD [Escherichia coli H591]
gi|332279170|ref|ZP_08391583.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
gi|378712881|ref|YP_005277774.1| FeS assembly protein SufD [Escherichia coli KO11FL]
gi|386609069|ref|YP_006124555.1| component of SufBCD complex [Escherichia coli W]
gi|386709537|ref|YP_006173258.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli W]
gi|407469430|ref|YP_006784128.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|407481908|ref|YP_006779057.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2011C-3493]
gi|410482458|ref|YP_006770004.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|415791804|ref|ZP_11495529.1| feS assembly protein SufD [Escherichia coli EPECa14]
gi|415817468|ref|ZP_11507599.1| feS assembly protein SufD [Escherichia coli OK1180]
gi|415826484|ref|ZP_11513587.1| feS assembly protein SufD [Escherichia coli OK1357]
gi|415877924|ref|ZP_11543917.1| FeS assembly protein SufD [Escherichia coli MS 79-10]
gi|417132184|ref|ZP_11976969.1| FeS assembly protein SufD [Escherichia coli 5.0588]
gi|417167926|ref|ZP_12000548.1| FeS assembly protein SufD [Escherichia coli 99.0741]
gi|417195513|ref|ZP_12015927.1| FeS assembly protein SufD [Escherichia coli 4.0522]
gi|417212981|ref|ZP_12022377.1| FeS assembly protein SufD [Escherichia coli JB1-95]
gi|417221796|ref|ZP_12025236.1| FeS assembly protein SufD [Escherichia coli 96.154]
gi|417240894|ref|ZP_12037061.1| FeS assembly protein SufD [Escherichia coli 9.0111]
gi|417265809|ref|ZP_12053178.1| FeS assembly protein SufD [Escherichia coli 3.3884]
gi|417298691|ref|ZP_12085929.1| FeS assembly protein SufD [Escherichia coli 900105 (10e)]
gi|417591765|ref|ZP_12242464.1| feS assembly protein SufD [Escherichia coli 2534-86]
gi|417596805|ref|ZP_12247454.1| feS assembly protein SufD [Escherichia coli 3030-1]
gi|417602262|ref|ZP_12252832.1| feS assembly protein SufD [Escherichia coli STEC_94C]
gi|417608224|ref|ZP_12258731.1| feS assembly protein SufD [Escherichia coli STEC_DG131-3]
gi|417639183|ref|ZP_12289337.1| feS assembly protein SufD [Escherichia coli TX1999]
gi|417667058|ref|ZP_12316606.1| feS assembly protein SufD [Escherichia coli STEC_O31]
gi|417805194|ref|ZP_12452150.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. LB226692]
gi|417832916|ref|ZP_12479364.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 01-09591]
gi|417865501|ref|ZP_12510545.1| ynhC [Escherichia coli O104:H4 str. C227-11]
gi|418941229|ref|ZP_13494564.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H43 str. T22]
gi|419170227|ref|ZP_13714118.1| feS assembly protein SufD [Escherichia coli DEC7A]
gi|419180880|ref|ZP_13724497.1| feS assembly protein SufD [Escherichia coli DEC7C]
gi|419186313|ref|ZP_13729830.1| feS assembly protein SufD [Escherichia coli DEC7D]
gi|419191600|ref|ZP_13735060.1| feS assembly protein SufD [Escherichia coli DEC7E]
gi|419197012|ref|ZP_13740405.1| feS assembly protein SufD [Escherichia coli DEC8A]
gi|419203260|ref|ZP_13746461.1| feS assembly protein SufD [Escherichia coli DEC8B]
gi|419209535|ref|ZP_13752625.1| feS assembly protein SufD [Escherichia coli DEC8C]
gi|419215569|ref|ZP_13758578.1| feS assembly protein SufD [Escherichia coli DEC8D]
gi|419226707|ref|ZP_13769575.1| feS assembly protein SufD [Escherichia coli DEC9A]
gi|419232499|ref|ZP_13775280.1| feS assembly protein SufD [Escherichia coli DEC9B]
gi|419237826|ref|ZP_13780553.1| feS assembly protein SufD [Escherichia coli DEC9C]
gi|419243265|ref|ZP_13785906.1| feS assembly protein SufD [Escherichia coli DEC9D]
gi|419249078|ref|ZP_13791667.1| feS assembly protein SufD [Escherichia coli DEC9E]
gi|419254885|ref|ZP_13797408.1| feS assembly protein SufD [Escherichia coli DEC10A]
gi|419261092|ref|ZP_13803520.1| feS assembly protein SufD [Escherichia coli DEC10B]
gi|419267085|ref|ZP_13809446.1| feS assembly protein SufD [Escherichia coli DEC10C]
gi|419272597|ref|ZP_13814899.1| feS assembly protein SufD [Escherichia coli DEC10D]
gi|419283953|ref|ZP_13826144.1| feS assembly protein SufD [Escherichia coli DEC10F]
gi|419345233|ref|ZP_13886613.1| feS assembly protein SufD [Escherichia coli DEC13A]
gi|419349652|ref|ZP_13891003.1| feS assembly protein SufD [Escherichia coli DEC13B]
gi|419354991|ref|ZP_13896259.1| feS assembly protein SufD [Escherichia coli DEC13C]
gi|419360131|ref|ZP_13901352.1| feS assembly protein SufD [Escherichia coli DEC13D]
gi|419365212|ref|ZP_13906380.1| feS assembly protein SufD [Escherichia coli DEC13E]
gi|419370072|ref|ZP_13911194.1| feS assembly protein SufD [Escherichia coli DEC14A]
gi|419380785|ref|ZP_13921746.1| feS assembly protein SufD [Escherichia coli DEC14C]
gi|419386138|ref|ZP_13927020.1| feS assembly protein SufD [Escherichia coli DEC14D]
gi|419804383|ref|ZP_14329541.1| FeS assembly protein SufD [Escherichia coli AI27]
gi|419864486|ref|ZP_14386936.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O103:H25 str. CVM9340]
gi|419874893|ref|ZP_14396785.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9534]
gi|419882355|ref|ZP_14403591.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9545]
gi|419888242|ref|ZP_14408771.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9570]
gi|419896011|ref|ZP_14415773.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9574]
gi|419901820|ref|ZP_14421134.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM9942]
gi|419908234|ref|ZP_14426979.1| FeS assembly protein SufD [Escherichia coli O26:H11 str. CVM10026]
gi|419930373|ref|ZP_14447978.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 541-1]
gi|419949959|ref|ZP_14466185.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli CUMT8]
gi|420091818|ref|ZP_14603554.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9602]
gi|420094778|ref|ZP_14606346.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9634]
gi|420100618|ref|ZP_14611776.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9455]
gi|420111402|ref|ZP_14621235.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9553]
gi|420114661|ref|ZP_14624293.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10021]
gi|420118953|ref|ZP_14628262.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10030]
gi|420129892|ref|ZP_14638407.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10224]
gi|420136240|ref|ZP_14644301.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM9952]
gi|420385655|ref|ZP_14885016.1| feS assembly protein SufD [Escherichia coli EPECa12]
gi|422355527|ref|ZP_16436241.1| FeS assembly protein SufD [Escherichia coli MS 117-3]
gi|422760931|ref|ZP_16814690.1| FeS assembly protein SufD [Escherichia coli E1167]
gi|422774425|ref|ZP_16828081.1| FeS assembly protein SufD [Escherichia coli H120]
gi|422956961|ref|ZP_16969435.1| FeS cluster assembly protein sufD [Escherichia coli H494]
gi|422987681|ref|ZP_16978457.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
C227-11]
gi|422994564|ref|ZP_16985328.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
C236-11]
gi|422999750|ref|ZP_16990504.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
09-7901]
gi|423003363|ref|ZP_16994109.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
04-8351]
gi|423009877|ref|ZP_17000615.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-3677]
gi|423019106|ref|ZP_17009815.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4404]
gi|423024272|ref|ZP_17014969.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4522]
gi|423030089|ref|ZP_17020777.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4623]
gi|423037921|ref|ZP_17028595.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423043042|ref|ZP_17033709.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423044781|ref|ZP_17035442.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423053314|ref|ZP_17042122.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423060280|ref|ZP_17049076.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423705670|ref|ZP_17680053.1| FeS cluster assembly protein sufD [Escherichia coli B799]
gi|424752181|ref|ZP_18180187.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CFSAN001629]
gi|424764119|ref|ZP_18191578.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CFSAN001630]
gi|424771312|ref|ZP_18198462.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CFSAN001632]
gi|425379417|ref|ZP_18763532.1| feS assembly protein SufD [Escherichia coli EC1865]
gi|425422377|ref|ZP_18803558.1| feS assembly protein SufD [Escherichia coli 0.1288]
gi|427804816|ref|ZP_18971883.1| hypothetical protein BN16_22261 [Escherichia coli chi7122]
gi|427809374|ref|ZP_18976439.1| hypothetical protein BN17_19391 [Escherichia coli]
gi|429719136|ref|ZP_19254076.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429724481|ref|ZP_19259349.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429776179|ref|ZP_19308164.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02030]
gi|429780632|ref|ZP_19312579.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783219|ref|ZP_19315135.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02092]
gi|429790397|ref|ZP_19322266.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02093]
gi|429794359|ref|ZP_19326200.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02281]
gi|429798012|ref|ZP_19329816.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02318]
gi|429806432|ref|ZP_19338171.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02913]
gi|429810877|ref|ZP_19342578.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-03439]
gi|429816317|ref|ZP_19347975.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-04080]
gi|429821004|ref|ZP_19352618.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-03943]
gi|429912679|ref|ZP_19378635.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429913549|ref|ZP_19379497.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429918591|ref|ZP_19384524.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429924397|ref|ZP_19390311.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429928336|ref|ZP_19394238.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429934889|ref|ZP_19400776.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429940559|ref|ZP_19406433.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429948192|ref|ZP_19414047.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429950837|ref|ZP_19416685.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429954135|ref|ZP_19419971.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432376833|ref|ZP_19619830.1| FeS cluster assembly protein sufD [Escherichia coli KTE12]
gi|432580424|ref|ZP_19816850.1| FeS cluster assembly protein sufD [Escherichia coli KTE56]
gi|432765034|ref|ZP_19999473.1| FeS cluster assembly protein sufD [Escherichia coli KTE48]
gi|432805735|ref|ZP_20039674.1| FeS cluster assembly protein sufD [Escherichia coli KTE91]
gi|432809326|ref|ZP_20043219.1| FeS cluster assembly protein sufD [Escherichia coli KTE101]
gi|432831659|ref|ZP_20065233.1| FeS cluster assembly protein sufD [Escherichia coli KTE135]
gi|432834677|ref|ZP_20068216.1| FeS cluster assembly protein sufD [Escherichia coli KTE136]
gi|432934301|ref|ZP_20133839.1| FeS cluster assembly protein sufD [Escherichia coli KTE184]
gi|432967803|ref|ZP_20156718.1| FeS cluster assembly protein sufD [Escherichia coli KTE203]
gi|433092088|ref|ZP_20278363.1| FeS cluster assembly protein sufD [Escherichia coli KTE138]
gi|433130209|ref|ZP_20315654.1| FeS cluster assembly protein sufD [Escherichia coli KTE163]
gi|433134910|ref|ZP_20320264.1| FeS cluster assembly protein sufD [Escherichia coli KTE166]
gi|433193656|ref|ZP_20377656.1| FeS cluster assembly protein sufD [Escherichia coli KTE90]
gi|450215047|ref|ZP_21895383.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O08]
gi|190902098|gb|EDV61842.1| FeS assembly protein SufD [Escherichia coli B7A]
gi|192957681|gb|EDV88125.1| FeS assembly protein SufD [Escherichia coli E110019]
gi|209912254|dbj|BAG77328.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351974|emb|CAU97706.1| component of SufBCD complex [Escherichia coli 55989]
gi|218361015|emb|CAQ98590.1| component of SufBCD complex [Escherichia coli IAI1]
gi|257754154|dbj|BAI25656.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|257764528|dbj|BAI36023.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300419094|gb|EFK02405.1| FeS assembly protein SufD [Escherichia coli MS 182-1]
gi|300525949|gb|EFK47018.1| FeS assembly protein SufD [Escherichia coli MS 119-7]
gi|300527377|gb|EFK48439.1| FeS assembly protein SufD [Escherichia coli MS 107-1]
gi|306908926|gb|EFN39422.1| FeS assembly protein SufD [Escherichia coli W]
gi|315060986|gb|ADT75313.1| component of SufBCD complex [Escherichia coli W]
gi|323152812|gb|EFZ39082.1| feS assembly protein SufD [Escherichia coli EPECa14]
gi|323180997|gb|EFZ66535.1| feS assembly protein SufD [Escherichia coli OK1180]
gi|323186046|gb|EFZ71402.1| feS assembly protein SufD [Escherichia coli OK1357]
gi|323378442|gb|ADX50710.1| FeS assembly protein SufD [Escherichia coli KO11FL]
gi|323948024|gb|EGB44016.1| FeS assembly protein SufD [Escherichia coli H120]
gi|324016511|gb|EGB85730.1| FeS assembly protein SufD [Escherichia coli MS 117-3]
gi|324119165|gb|EGC13053.1| FeS assembly protein SufD [Escherichia coli E1167]
gi|331063559|gb|EGI35470.1| FeS assembly protein SufD [Escherichia coli TA271]
gi|331074012|gb|EGI45332.1| FeS assembly protein SufD [Escherichia coli H591]
gi|332101522|gb|EGJ04868.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
gi|340733798|gb|EGR62928.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 01-09591]
gi|340740097|gb|EGR74322.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. LB226692]
gi|341918790|gb|EGT68403.1| ynhC [Escherichia coli O104:H4 str. C227-11]
gi|342927683|gb|EGU96405.1| FeS assembly protein SufD [Escherichia coli MS 79-10]
gi|345340425|gb|EGW72843.1| feS assembly protein SufD [Escherichia coli 2534-86]
gi|345349928|gb|EGW82203.1| feS assembly protein SufD [Escherichia coli STEC_94C]
gi|345355718|gb|EGW87927.1| feS assembly protein SufD [Escherichia coli 3030-1]
gi|345359765|gb|EGW91940.1| feS assembly protein SufD [Escherichia coli STEC_DG131-3]
gi|345394035|gb|EGX23800.1| feS assembly protein SufD [Escherichia coli TX1999]
gi|354865639|gb|EHF26068.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
C236-11]
gi|354869808|gb|EHF30216.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
C227-11]
gi|354870896|gb|EHF31296.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
04-8351]
gi|354874313|gb|EHF34684.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
09-7901]
gi|354881245|gb|EHF41575.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-3677]
gi|354891548|gb|EHF51776.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4404]
gi|354894433|gb|EHF54627.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4522]
gi|354896715|gb|EHF56884.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354899680|gb|EHF59824.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4623]
gi|354901839|gb|EHF61963.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354914504|gb|EHF74488.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354918996|gb|EHF78951.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354919857|gb|EHF79796.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-4632 C4]
gi|371599262|gb|EHN88052.1| FeS cluster assembly protein sufD [Escherichia coli H494]
gi|375323453|gb|EHS69163.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H43 str. T22]
gi|378016864|gb|EHV79741.1| feS assembly protein SufD [Escherichia coli DEC7A]
gi|378024248|gb|EHV86902.1| feS assembly protein SufD [Escherichia coli DEC7C]
gi|378030017|gb|EHV92621.1| feS assembly protein SufD [Escherichia coli DEC7D]
gi|378039543|gb|EHW02031.1| feS assembly protein SufD [Escherichia coli DEC7E]
gi|378048324|gb|EHW10678.1| feS assembly protein SufD [Escherichia coli DEC8A]
gi|378052221|gb|EHW14531.1| feS assembly protein SufD [Escherichia coli DEC8B]
gi|378055400|gb|EHW17662.1| feS assembly protein SufD [Escherichia coli DEC8C]
gi|378064027|gb|EHW26189.1| feS assembly protein SufD [Escherichia coli DEC8D]
gi|378076702|gb|EHW38704.1| feS assembly protein SufD [Escherichia coli DEC9A]
gi|378078992|gb|EHW40971.1| feS assembly protein SufD [Escherichia coli DEC9B]
gi|378085239|gb|EHW47132.1| feS assembly protein SufD [Escherichia coli DEC9C]
gi|378091873|gb|EHW53700.1| feS assembly protein SufD [Escherichia coli DEC9D]
gi|378096451|gb|EHW58221.1| feS assembly protein SufD [Escherichia coli DEC9E]
gi|378101927|gb|EHW63611.1| feS assembly protein SufD [Escherichia coli DEC10A]
gi|378108423|gb|EHW70036.1| feS assembly protein SufD [Escherichia coli DEC10B]
gi|378112957|gb|EHW74530.1| feS assembly protein SufD [Escherichia coli DEC10C]
gi|378117973|gb|EHW79482.1| feS assembly protein SufD [Escherichia coli DEC10D]
gi|378135495|gb|EHW96806.1| feS assembly protein SufD [Escherichia coli DEC10F]
gi|378188268|gb|EHX48874.1| feS assembly protein SufD [Escherichia coli DEC13A]
gi|378203030|gb|EHX63455.1| feS assembly protein SufD [Escherichia coli DEC13B]
gi|378203430|gb|EHX63853.1| feS assembly protein SufD [Escherichia coli DEC13C]
gi|378205061|gb|EHX65476.1| feS assembly protein SufD [Escherichia coli DEC13D]
gi|378215135|gb|EHX75435.1| feS assembly protein SufD [Escherichia coli DEC13E]
gi|378219532|gb|EHX79800.1| feS assembly protein SufD [Escherichia coli DEC14A]
gi|378229661|gb|EHX89797.1| feS assembly protein SufD [Escherichia coli DEC14C]
gi|378232613|gb|EHX92711.1| feS assembly protein SufD [Escherichia coli DEC14D]
gi|383405229|gb|AFH11472.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli W]
gi|384472568|gb|EIE56621.1| FeS assembly protein SufD [Escherichia coli AI27]
gi|385713062|gb|EIG49998.1| FeS cluster assembly protein sufD [Escherichia coli B799]
gi|386150038|gb|EIH01327.1| FeS assembly protein SufD [Escherichia coli 5.0588]
gi|386170952|gb|EIH43000.1| FeS assembly protein SufD [Escherichia coli 99.0741]
gi|386189555|gb|EIH78321.1| FeS assembly protein SufD [Escherichia coli 4.0522]
gi|386194657|gb|EIH88904.1| FeS assembly protein SufD [Escherichia coli JB1-95]
gi|386201598|gb|EII00589.1| FeS assembly protein SufD [Escherichia coli 96.154]
gi|386212538|gb|EII22983.1| FeS assembly protein SufD [Escherichia coli 9.0111]
gi|386231802|gb|EII59149.1| FeS assembly protein SufD [Escherichia coli 3.3884]
gi|386257730|gb|EIJ13213.1| FeS assembly protein SufD [Escherichia coli 900105 (10e)]
gi|388340139|gb|EIL06420.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O103:H25 str. CVM9340]
gi|388349916|gb|EIL15347.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9534]
gi|388359374|gb|EIL23694.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9574]
gi|388360950|gb|EIL25100.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9570]
gi|388362012|gb|EIL26068.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9545]
gi|388375351|gb|EIL38376.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM9942]
gi|388375539|gb|EIL38546.1| FeS assembly protein SufD [Escherichia coli O26:H11 str. CVM10026]
gi|388400356|gb|EIL61103.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 541-1]
gi|388417928|gb|EIL77751.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli CUMT8]
gi|391306532|gb|EIQ64288.1| feS assembly protein SufD [Escherichia coli EPECa12]
gi|394381107|gb|EJE58804.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10224]
gi|394382133|gb|EJE59785.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9602]
gi|394395203|gb|EJE71676.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CVM9634]
gi|394398384|gb|EJE74564.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9553]
gi|394408525|gb|EJE83167.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10021]
gi|394418759|gb|EJE92417.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM9952]
gi|394419637|gb|EJE93222.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CVM9455]
gi|394432326|gb|EJF04428.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CVM10030]
gi|397785305|gb|EJK96155.1| feS assembly protein SufD [Escherichia coli STEC_O31]
gi|406777620|gb|AFS57044.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|407054205|gb|AFS74256.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2011C-3493]
gi|407065465|gb|AFS86512.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|408298681|gb|EKJ16612.1| feS assembly protein SufD [Escherichia coli EC1865]
gi|408344966|gb|EKJ59312.1| feS assembly protein SufD [Escherichia coli 0.1288]
gi|412962998|emb|CCK46916.1| hypothetical protein BN16_22261 [Escherichia coli chi7122]
gi|412969553|emb|CCJ44190.1| hypothetical protein BN17_19391 [Escherichia coli]
gi|421938470|gb|EKT96044.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O26:H11 str. CFSAN001629]
gi|421939268|gb|EKT96797.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H11 str. CFSAN001630]
gi|421940663|gb|EKT98113.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O111:H8 str. CFSAN001632]
gi|429347925|gb|EKY84697.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02030]
gi|429350433|gb|EKY87164.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354606|gb|EKY91302.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02092]
gi|429364725|gb|EKZ01344.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02093]
gi|429372375|gb|EKZ08925.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02281]
gi|429374325|gb|EKZ10865.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02318]
gi|429380050|gb|EKZ16549.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-02913]
gi|429384430|gb|EKZ20887.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-03439]
gi|429386514|gb|EKZ22962.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-03943]
gi|429394133|gb|EKZ30514.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429394429|gb|EKZ30805.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429396438|gb|EKZ32790.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
11-04080]
gi|429407313|gb|EKZ43566.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429410144|gb|EKZ46367.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429418706|gb|EKZ54848.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429426304|gb|EKZ62393.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429426710|gb|EKZ62797.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429431274|gb|EKZ67323.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429440636|gb|EKZ76613.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429444216|gb|EKZ80162.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429449843|gb|EKZ85741.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429453706|gb|EKZ89574.1| FeS cluster assembly protein sufD [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430899125|gb|ELC21230.1| FeS cluster assembly protein sufD [Escherichia coli KTE12]
gi|431105255|gb|ELE09590.1| FeS cluster assembly protein sufD [Escherichia coli KTE56]
gi|431310795|gb|ELF98975.1| FeS cluster assembly protein sufD [Escherichia coli KTE48]
gi|431355429|gb|ELG42137.1| FeS cluster assembly protein sufD [Escherichia coli KTE91]
gi|431362094|gb|ELG48672.1| FeS cluster assembly protein sufD [Escherichia coli KTE101]
gi|431375629|gb|ELG60952.1| FeS cluster assembly protein sufD [Escherichia coli KTE135]
gi|431385037|gb|ELG69024.1| FeS cluster assembly protein sufD [Escherichia coli KTE136]
gi|431453833|gb|ELH34215.1| FeS cluster assembly protein sufD [Escherichia coli KTE184]
gi|431470920|gb|ELH50813.1| FeS cluster assembly protein sufD [Escherichia coli KTE203]
gi|431611070|gb|ELI80350.1| FeS cluster assembly protein sufD [Escherichia coli KTE138]
gi|431647257|gb|ELJ14741.1| FeS cluster assembly protein sufD [Escherichia coli KTE163]
gi|431657773|gb|ELJ24735.1| FeS cluster assembly protein sufD [Escherichia coli KTE166]
gi|431717483|gb|ELJ81580.1| FeS cluster assembly protein sufD [Escherichia coli KTE90]
gi|449319265|gb|EMD09318.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O08]
Length = 423
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|432674714|ref|ZP_19910189.1| FeS cluster assembly protein sufD [Escherichia coli KTE142]
gi|431215587|gb|ELF13273.1| FeS cluster assembly protein sufD [Escherichia coli KTE142]
Length = 423
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|386701354|ref|YP_006165191.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KO11FL]
gi|383392881|gb|AFH17839.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KO11FL]
Length = 423
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|331647172|ref|ZP_08348266.1| FeS assembly protein SufD [Escherichia coli M605]
gi|417662270|ref|ZP_12311851.1| iron-sulfur cluster assembly protein SufD [Escherichia coli AA86]
gi|432801839|ref|ZP_20035820.1| FeS cluster assembly protein sufD [Escherichia coli KTE84]
gi|330911488|gb|EGH39998.1| iron-sulfur cluster assembly protein SufD [Escherichia coli AA86]
gi|331043955|gb|EGI16091.1| FeS assembly protein SufD [Escherichia coli M605]
gi|431348816|gb|ELG35658.1| FeS cluster assembly protein sufD [Escherichia coli KTE84]
Length = 423
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 56/346 (16%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLS--------TPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS++L Q L + + T T P+RK E +++T + +SQ
Sbjct: 4 LPNSSNALQQWHHLFEAEGAKRSTQAQQHLQQLLRTGLPTRKHENWKYTPLDGLTNSQFV 63
Query: 112 PIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
I + +L ++ DA LV +DG YV +L ++G
Sbjct: 64 SIAGEISPQQRDALALTLDA--VRLVFVDG---------------RYVPALSDATEGSGY 106
Query: 167 RVSDFISEFQCG-------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
VS I++ + G ++F + A + I V G + P+ L +++ V
Sbjct: 107 EVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHIT---QGV 161
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQ 278
+++ ++ R + + EG E +IE FV ND ++ + + + ++H L
Sbjct: 162 AGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGARFTINVAANAHLQHIKLA 219
Query: 279 NQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 335
+ S + AH TA + + GG + RHN Q G ++ ++S +
Sbjct: 220 FENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTSTQLNGENSTLRINSLAMP 276
Query: 336 VSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G + V
Sbjct: 277 VKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|157154860|ref|YP_001462975.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli E24377A]
gi|157076890|gb|ABV16598.1| FeS assembly protein SufD [Escherichia coli E24377A]
Length = 423
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGKISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|168263801|ref|ZP_02685774.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205347636|gb|EDZ34267.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 423
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 143/333 (42%), Gaps = 30/333 (9%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQI- 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 -QPITRPSSSLD-VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
Q +T ++ D ++ LV +DG +PD G +
Sbjct: 64 QQCVTISAAQRDALALQIDAVRLVFVDGRF---------MPDLSDSTQNSGFDVSVRDER 114
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ Q ++F + A + I V + P+ L +++ VD +L ++
Sbjct: 115 QTLAAPVQ-PEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QGVDGDELNTAH 170
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R + + EG E +IE +V ++ + L + + ++RH L ++ ++ H
Sbjct: 171 YRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLAFENASSYHFA 229
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 348
+ T + G + RH+ Q G + L+S + V ++ D +R
Sbjct: 230 HNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTW 287
Query: 349 LDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 288 LEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|157161146|ref|YP_001458464.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli HS]
gi|170019969|ref|YP_001724923.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli ATCC 8739]
gi|188491802|ref|ZP_02999072.1| FeS assembly protein SufD [Escherichia coli 53638]
gi|432485431|ref|ZP_19727347.1| FeS cluster assembly protein sufD [Escherichia coli KTE212]
gi|432670759|ref|ZP_19906290.1| FeS cluster assembly protein sufD [Escherichia coli KTE119]
gi|432881918|ref|ZP_20097998.1| FeS cluster assembly protein sufD [Escherichia coli KTE154]
gi|433173540|ref|ZP_20358075.1| FeS cluster assembly protein sufD [Escherichia coli KTE232]
gi|157066826|gb|ABV06081.1| FeS assembly protein SufD [Escherichia coli HS]
gi|169754897|gb|ACA77596.1| FeS assembly protein SufD [Escherichia coli ATCC 8739]
gi|188487001|gb|EDU62104.1| FeS assembly protein SufD [Escherichia coli 53638]
gi|431015828|gb|ELD29375.1| FeS cluster assembly protein sufD [Escherichia coli KTE212]
gi|431210833|gb|ELF08816.1| FeS cluster assembly protein sufD [Escherichia coli KTE119]
gi|431411424|gb|ELG94535.1| FeS cluster assembly protein sufD [Escherichia coli KTE154]
gi|431693806|gb|ELJ59200.1| FeS cluster assembly protein sufD [Escherichia coli KTE232]
Length = 423
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|445115334|ref|ZP_21378209.1| FeS assembly protein SufD [Prevotella nigrescens F0103]
gi|444840445|gb|ELX67477.1| FeS assembly protein SufD [Prevotella nigrescens F0103]
Length = 447
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 143/312 (45%), Gaps = 26/312 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSS-----SLDVS 123
L K+RD + + + +P++K E +++TD + + +Q + P + DV
Sbjct: 26 LNKVRDKAFEDFKAQGFPTKKVERYKYTDIPKLFAPDYGLNLQRLKMPINPYEDFKCDVP 85
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLF 181
+ V+ D F N L + L DG+ V S + +++ ++ D
Sbjct: 86 NLSTSVYFVVNDQFY-NDQLPKAQLNDGIVVDSFSNAIKTHGEIITNHYAKLADTAKDAL 144
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
+ N M A D +YVP G K + I + +++ +VD + N R+++++EEG E+
Sbjct: 145 TAFNTMLAQDGLFVYVPKGVKSDRTI--QVINILRSDVD----LMLNRRILIVLEEGAEL 198
Query: 242 GIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
++ F +D + A V+E +G K+ + L+ L + + Q++ S
Sbjct: 199 SML--FCDDSADDRKFLATQVIEAYVGDNAKLELNCLEETHLKNVRVSNVYIDQQSNSRV 256
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 358
++ ++R+ + + G +E L+ +V+D+ Q + + +++H G C Q
Sbjct: 257 SHNIITLHNGVTRNKLDLTFSGEGSECFLNG--CVVADKHQHVDNNTVINHAVGNCTSNQ 314
Query: 359 LHKCIV-AHSLG 369
L+K ++ H++G
Sbjct: 315 LYKYVLDDHAVG 326
>gi|389722325|ref|ZP_10188975.1| FeS assembly protein SufD, partial [Rhodanobacter sp. 115]
gi|388442278|gb|EIL98485.1| FeS assembly protein SufD, partial [Rhodanobacter sp. 115]
Length = 332
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 133/312 (42%), Gaps = 28/312 (8%)
Query: 57 EDSLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
E ++P +S+L P P L + R + P + E +++T +
Sbjct: 3 ESAVPFVASTLAVPPPSSGIGWLDEARHENLAAFGEAGLPDTRVEAWKYTALRALSQRSF 62
Query: 111 QPITRPSSSLDVSTDA------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+++ D+ +A P LV ++G + +LS LP G+ +L +S +
Sbjct: 63 IHGDAQAATRDIDPEAFALPGLDGPRLVFVNGVFRGDLSDLSALPAGL---ALRPLSQAL 119
Query: 165 MK-----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+ R + + GD F +N A D V+ V AG K++ P+ L ++ V
Sbjct: 120 AQDPEPLRFALARRYKERGDAFAQLNAAQAIDGVVLRVAAGAKIDVPVRLVFVGVAADAE 179
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ L R V+ + EG E+ ++E+ VG G V +VV+ G +++H+ Q+
Sbjct: 180 LAWHL-----RNVIELGEGAELTLVEQHVGS-GTARQLGTLVADVVLRDGARLQHTVAQD 233
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
S +A + A++ + L + GG L RH++ +G L + + V
Sbjct: 234 ASADATLVHRHALQLGAQAQALLHVLELGGALVRHDLQADLVG--NGARLDTRGVFVPRG 291
Query: 340 TQDLHSRLLLDH 351
Q + ++L + H
Sbjct: 292 RQHIDTQLAIRH 303
>gi|116252325|ref|YP_768163.1| iron-sulfur cluster assembly protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256973|emb|CAK08067.1| putative iron-sulfur cluster assembly protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 442
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 144/359 (40%), Gaps = 22/359 (6%)
Query: 22 PKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSS 81
P A+ + RV T+ T S + A L ++ LP + LRD
Sbjct: 2 PTSSARRPEFRVERTTSMNMQTTSRLTAAETA--LIEAFNQQIGELPGNGAVTALRDRLL 59
Query: 82 QTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQN 140
L P+R+ E + +TD +++++ Q S +L+ D L +I G N
Sbjct: 60 DDLKKAGLPTRRIEAWHYTDLKNLLRTVPQQAGDAGSQALEPLVD-DATVLAVIQGH-SN 117
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAG 200
+ L Y LL DG + + D ING D V+ VPA
Sbjct: 118 QKATVDGLGVSAYSERLL---DG---SAAGGLDALGSDDAVGRINGSFVRDGYVVDVPAD 171
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
++E P+ +++ + G +LP+S G + +IE + G D +
Sbjct: 172 TELETPLEIQF--IHAGGQTHTRLPVS-------FGAGVKATVIERHLTVTG-DAALVSH 221
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
V ++ +G+G ++ LQ Q + H+ + + L ++ GGKL R +H++
Sbjct: 222 VSDITVGEGTELTWIILQQQGADDTHLGQIRIDLGADAKLRLFVINAGGKLVRQELHIKV 281
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
G + L +LL ++ D+ L D P ++ + +V + VF G ++V
Sbjct: 282 TGEGADLTLRGINLLGAESHTDVTMVLGHDVPNTGSTEVIRNVV-FDRAKGVFQGMIRV 339
>gi|212712080|ref|ZP_03320208.1| hypothetical protein PROVALCAL_03159 [Providencia alcalifaciens DSM
30120]
gi|422018400|ref|ZP_16364957.1| cysteine desulfurase activator complex subunit SufD [Providencia
alcalifaciens Dmel2]
gi|212685602|gb|EEB45130.1| hypothetical protein PROVALCAL_03159 [Providencia alcalifaciens DSM
30120]
gi|414104692|gb|EKT66257.1| cysteine desulfurase activator complex subunit SufD [Providencia
alcalifaciens Dmel2]
Length = 435
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 24/296 (8%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALNL 145
P+ + E + +T + + ++Q + + P+ + +S P +VL+DG L
Sbjct: 56 PAFRHEDWHYTPLNSVLNTQYR-FSSPNQQVQLSEALALPIDAYRIVLVDGRYN---AEL 111
Query: 146 SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVEN 205
S++ G + SLL D + VS ++F + A +I + A
Sbjct: 112 SSVDTGEFQVSLLDSQDWLPDAVS--------SEIFLHLTECLAVQPLIIQLAANKVAAK 163
Query: 206 PIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
P+YL L++ + D + + +S R + + + +IE FV + + + L V
Sbjct: 164 PLYL--LNISSSSHDPEAMNMSQYRYHLTLGNNSQSHVIEHFVSLD-DQPHLTGGRLTVE 220
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
+G + H L ++ +A H + S + G L+RH+ + G +T
Sbjct: 221 VGDNVQFTHFKLMTENASAQHFAHNDIIVGRDSVVKSSSFLLGAGLTRHHTSSRLEGENT 280
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
E EL+S L ++ D +R L+H GYC QLHK I S +AVF+G +KV
Sbjct: 281 EFELNSLLLPQGNEIAD--TRSYLEHNAGYCSSHQLHKVIAMDS-SKAVFNGMIKV 333
>gi|189465086|ref|ZP_03013871.1| hypothetical protein BACINT_01430 [Bacteroides intestinalis DSM
17393]
gi|189437360|gb|EDV06345.1| FeS assembly protein SufD [Bacteroides intestinalis DSM 17393]
Length = 447
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL +++ + + + + D + N D ++YV
Sbjct: 101 NKALPASHLPEGVIFGSLKEMAEKYPELLKKYYGKLADTSKDGVTAFNTAFTQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P +E PI L +++ G+V+ + N RV++++E+G + ++ V D
Sbjct: 161 PKNVALERPIQL--VNILRGDVNF----LVNRRVLIVLEDGAQARML---VCDHAMDAVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV +G+ L+ + I V+QE S L ++ SR+
Sbjct: 212 FLATQVIEVFVGENAVFDLYELEETHTSTVRISNMYVKQEANSNVLLNGMTLHNGTSRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + ++DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIADKNQHVDNNTIIDHAVPNC 310
>gi|194438568|ref|ZP_03070657.1| FeS assembly protein SufD [Escherichia coli 101-1]
gi|251785135|ref|YP_002999439.1| SufD component of SufBCD Fe-S cluster scaffold complex, subunit of
SufBCD Fe-S cluster scaffold complex [Escherichia coli
BL21(DE3)]
gi|253773362|ref|YP_003036193.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254161742|ref|YP_003044850.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli B str. REL606]
gi|254288531|ref|YP_003054279.1| component of SufBCD complex [Escherichia coli BL21(DE3)]
gi|297517141|ref|ZP_06935527.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli OP50]
gi|300930849|ref|ZP_07146219.1| FeS assembly protein SufD [Escherichia coli MS 187-1]
gi|422786265|ref|ZP_16839004.1| FeS assembly protein SufD [Escherichia coli H489]
gi|422789633|ref|ZP_16842338.1| FeS assembly protein SufD [Escherichia coli TA007]
gi|442598932|ref|ZP_21016674.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|194422578|gb|EDX38576.1| FeS assembly protein SufD [Escherichia coli 101-1]
gi|242377408|emb|CAQ32157.1| SufD component of SufBCD Fe-S cluster scaffold complex, subunit of
SufBCD Fe-S cluster scaffold complex [Escherichia coli
BL21(DE3)]
gi|253324406|gb|ACT29008.1| FeS assembly protein SufD [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253973643|gb|ACT39314.1| component of SufBCD complex [Escherichia coli B str. REL606]
gi|253977838|gb|ACT43508.1| component of SufBCD complex [Escherichia coli BL21(DE3)]
gi|300461324|gb|EFK24817.1| FeS assembly protein SufD [Escherichia coli MS 187-1]
gi|323962172|gb|EGB57767.1| FeS assembly protein SufD [Escherichia coli H489]
gi|323973940|gb|EGB69112.1| FeS assembly protein SufD [Escherichia coli TA007]
gi|441652353|emb|CCQ02171.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
Length = 423
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|194477105|ref|YP_002049284.1| ABC transporter, membrane component [Paulinella chromatophora]
gi|171192112|gb|ACB43074.1| ABC transporter, membrane component [Paulinella chromatophora]
Length = 417
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 128/309 (41%), Gaps = 51/309 (16%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPI--------TRPSSSLDVSTDAQFPSLVLIDGFIQNS 141
P + E ++FTD +K+ Q I +PS ++ +T+ ++++G
Sbjct: 33 PLKSMEAWQFTDIKRLKNLMGQGILNVNADLLNKPSKKIEKTTNG--SCRIILNGC--RD 88
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
L LP+G+ S K + D + S+ G + P
Sbjct: 89 PLGAGELPNGI--------SQLTEKELKDHLGN--------SLKATGCQH----HWPITL 128
Query: 202 KVENPIYLKYLSVEGGNVDSKKLP-----------ISNPRVVVLVEEGGEVGIIEEFVGK 250
N Y L VEG K+P I RV++L+EE ++ +++ +GK
Sbjct: 129 NNANANYCLALRVEG----MVKIPLELVFAPMSVGIQAVRVLLLLEERAKLSLLQVNMGK 184
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
+S LE +G+ ++ H L A + TA+ Q+ S Y+ V G
Sbjct: 185 ---GLQLLSSTLEAHLGRESQLDHGILAFGDGEAGLLAHTAIVQKPKSNYKETYVIKGWG 241
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 370
L+R + Q+ + ET L ++ +D D HS + + P G Q+HK I A + G
Sbjct: 242 LARFEPRITQISGEAETTLRGLQVVDADNQIDTHSYVSFEGPGGKLDQVHKAI-AEAKGH 300
Query: 371 AVFDGNVKV 379
++F+G ++V
Sbjct: 301 SIFNGIIRV 309
>gi|149196445|ref|ZP_01873500.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
gi|149140706|gb|EDM29104.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
Length = 434
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 18/318 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP--- 129
L R S + + +P R +E +++T + Q + + S +V +
Sbjct: 22 LGDFRKSHASKVSELEFPGRHNERWKYTPLRAVLELDYQVAQQVNVSDEVLASHRLQGSI 81
Query: 130 SLVLIDGFIQNSALNL-SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---DLFWSIN 185
LV I+G NL +LP G V + + + I E++ D+F ++N
Sbjct: 82 ELVFINGSFSEELSNLPVDLPKGFSVVPVSQALNSDLAHDVQNILEYEVSEEEDVFETLN 141
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D I V G E I++ S +++ ++ R ++ +EEG +IE
Sbjct: 142 KSSFRDGAFIKVAKGAYSETAIHILNFS------SAEQSAVNFSRHLIYLEEGALATVIE 195
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
++G N + ++V+ + + +S LQN+S + ++ R + +
Sbjct: 196 TCADRDGEVKKINNIMTDIVLQERSVLTYSRLQNESEESVNVSALRARLAADAKFNSSVF 255
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCI 363
S+GG LSRH + V+ G ET+L L + T +R ++ H P QL+K +
Sbjct: 256 SSGGALSRHFMDVELNGKHAETDL--LGLFTTKGTMHADNRGIIRHNVPECEANQLYKGV 313
Query: 364 VAHSLGQAVFDGNVKVNR 381
+ S + VF+G V + R
Sbjct: 314 LDDS-SRGVFNGIVNIAR 330
>gi|357588630|ref|ZP_09127296.1| Fe-S cluster assembly ABC transporter permease [Corynebacterium
nuruki S6-4]
Length = 493
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G VE P+ Y + N+ + R +++V+EG V +E
Sbjct: 214 VYVPKGVHVEIPLQ-AYFRINTENMGQFE------RTLIIVDEGAFVHYVEGCTAPIYQS 266
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++++E+++ KGG+ R++ +QN S N ++ R E + E V+ + G K++
Sbjct: 267 DSLHSAIVEIIVKKGGRCRYTTIQNWSNNVLNLVTQRARAEEGATMEWVDGNIGSKITMK 326
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + ++ S QTQD ++++ P + K VA G+A +
Sbjct: 327 YPAVWMTGPHAKGQVLSLGFAGEGQTQDTGAKMVHMAPYTSSNIISKS-VARQGGRAAYR 385
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 386 GLVQVNK 392
>gi|332881714|ref|ZP_08449362.1| putative FeS assembly protein SufD [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357044641|ref|ZP_09106290.1| putative FeS assembly protein SufD [Paraprevotella clara YIT 11840]
gi|332680353|gb|EGJ53302.1| putative FeS assembly protein SufD [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355532448|gb|EHH01832.1| putative FeS assembly protein SufD [Paraprevotella clara YIT 11840]
Length = 447
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 135/307 (43%), Gaps = 25/307 (8%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DV 122
+ LRD + + +P++K E +++TD + ++++ P + DV
Sbjct: 25 AMNALRDKAFEDFTRQGFPTQKVERYKYTDVPAAFAPDYGLNLNRVEFSVNPYEAFRCDV 84
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC--GDL 180
+ V+ D F + S L + LP+GV V SL ++ RVS + D
Sbjct: 85 PNLSTSLYFVVNDAFYRKS-LPAAALPEGVVVCSLKQAAEDYPDRVSACYGKLARTEKDA 143
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M D IYVP G VE L+ +++ +VD ++N RV+V++EE +
Sbjct: 144 INALNTMLVQDGLFIYVPRGVVVERT--LQVVNILRSDVD----LMANRRVLVVLEENAQ 197
Query: 241 VGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
++ F +D + V+EV + ++ L+ + VRQ+ S
Sbjct: 198 ARLL--FCDHAMDDRNFLTTQVVEVFAAENARLELYELEETHVKNRRFSNMYVRQQRGSV 255
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 357
L ++ +R+ + G E+ L + +++D+ Q + + L+DH +C
Sbjct: 256 VNLYNITLHNGQTRNRTDLVLDGEGAESNL--YGCVIADKEQRVDNNTLIDHRAEHCVSN 313
Query: 358 QLHKCIV 364
QL+K ++
Sbjct: 314 QLYKYVM 320
>gi|51596635|ref|YP_070826.1| cysteine desulfurase [Yersinia pseudotuberculosis IP 32953]
gi|186895691|ref|YP_001872803.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis PB1/+]
gi|51589917|emb|CAH21549.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|186698717|gb|ACC89346.1| FeS assembly protein SufD [Yersinia pseudotuberculosis PB1/+]
Length = 441
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +P G + P+YL L + GN DS + S+ R ++VE + +IE FV +
Sbjct: 158 IRLPVGQHSDKPLYL--LHISSGN-DSDMVNTSHSRHHLVVEANAQAEVIEHFVSLD-EQ 213
Query: 255 CYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G ++ H ++ +S + AH R A + + G L
Sbjct: 214 PHFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGL 270
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G
Sbjct: 271 TRHNTSSQLNGEGSSLSMNSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMVR-ERG 327
Query: 370 QAVFDGNVKVNR 381
+A+F+G +KV +
Sbjct: 328 KAIFNGMIKVAK 339
>gi|399030740|ref|ZP_10731071.1| FeS assembly protein SufD [Flavobacterium sp. CF136]
gi|398071139|gb|EJL62409.1| FeS assembly protein SufD [Flavobacterium sp. CF136]
Length = 438
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 150/344 (43%), Gaps = 23/344 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + + L +R ++ + + +P++K+E +++T ++I +
Sbjct: 1 MDLKEKLVSSFMAFEERVDVHSDLHDIRTNAIKNFENKGFPTKKEEAWKYTSLNVILKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ ++++ + ++ LV IDG + +S L+ S DG+ V + ++
Sbjct: 61 FTVFPKQENAIEFNQVKKYFLHEIDTYKLVFIDG-VFSSHLS-STTHDGIDVCLMSSALT 118
Query: 162 DGIMKRVSD-FISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K V D + ++ D S+N A + I +P + PI + Y S GN
Sbjct: 119 KPKYKMVIDKYFNQIASKDESLTSLNTAFASEGAFINIPQKKVADKPIEIMYFST--GN- 175
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + PR +++V E V IIE N NSV E+ K V + +QN
Sbjct: 176 --EAALMVQPRNLIIVGENSHVQIIERHQSLNENPV-LTNSVTEIFAQKRAIVDYYKIQN 232
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
++ A I T V Q+ S + S GG L+R+N++ G + L+ ++ Q
Sbjct: 233 DNIEANLIDNTYVSQQQESHVYVHTFSFGGNLTRNNLNFYHFGERLTSTLNGITIIGEKQ 292
Query: 340 TQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ L++H C Q +K I + VF+G V V +
Sbjct: 293 HVDHYT--LVNHATPNCESFQDYKGIFS-DRSTGVFNGKVLVEK 333
>gi|387132366|ref|YP_006298338.1| FeS assembly protein SufD [Prevotella intermedia 17]
gi|386375214|gb|AFJ08352.1| FeS assembly protein SufD [Prevotella intermedia 17]
Length = 447
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 143/312 (45%), Gaps = 26/312 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSS-----SLDVS 123
L K+RD + + + +P++K E +++TD + + +Q + P + DV
Sbjct: 26 LNKVRDKAFEDFKAQGFPTKKVERYKYTDIPKLFAPDYGLNLQRLRMPINPYEDFKCDVP 85
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLF 181
+ V+ D F N L + L DG+ V S + +++ ++ D
Sbjct: 86 NLSTSVYFVVNDQFY-NDQLPKAQLNDGIVVDSFSNAIKTHGEIITNHYAKLADTAKDAL 144
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
+ N M A D +YVP G K + I + +++ +VD + N R+++++EEG E+
Sbjct: 145 TAFNTMLAQDGLFVYVPKGVKSDRTI--QVINILRSDVD----LMLNRRILIVLEEGAEL 198
Query: 242 GIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
++ F +D + A V+E +G K+ + L+ L + + Q++ S
Sbjct: 199 SML--FCDDSADDRKFLATQVIEAYVGDNAKLELNCLEETHLKNVRVSNVYIDQQSNSRV 256
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 358
++ ++R+ + + G +E L+ +V+D+ Q + + +++H G C Q
Sbjct: 257 SHNIITLHNGVTRNKLDLTFSGEGSECFLNG--CVVADKHQHVDNNTVINHAVGNCTSNQ 314
Query: 359 LHKCIV-AHSLG 369
L+K ++ H++G
Sbjct: 315 LYKYVLDDHAVG 326
>gi|432868882|ref|ZP_20089677.1| FeS cluster assembly protein sufD [Escherichia coli KTE147]
gi|431410798|gb|ELG93941.1| FeS cluster assembly protein sufD [Escherichia coli KTE147]
Length = 423
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + I ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINIAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|340350381|ref|ZP_08673373.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella nigrescens ATCC 33563]
gi|339608459|gb|EGQ13354.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella nigrescens ATCC 33563]
Length = 447
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 145/314 (46%), Gaps = 30/314 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSL-DVSTDAQ 127
L K+RD + + + +P++K E +++TD + + +Q + P + D D
Sbjct: 26 LNKVRDKAFEDFKAQGFPTKKVERYKYTDIPKLFAPDYGLNLQRLRMPINPYEDFKCDV- 84
Query: 128 FPSL------VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGD 179
P+L V+ D F N L + L DG+ V S + +++ ++ D
Sbjct: 85 -PNLNTSVYFVVNDQFY-NDQLPKAQLNDGIVVDSFSNAIKTHGEIITNHYAKLADTAKD 142
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+ N M A D +YVP G K + I + +++ +VD + N R+++++EEG
Sbjct: 143 ALTAFNTMLAQDGLFVYVPKGVKSDRTI--QVINILRSDVD----LMLNRRILIVLEEGA 196
Query: 240 EVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
E+ ++ F +D + A V+E +G K+ + L+ L + + Q++ S
Sbjct: 197 ELSML--FCDDSADDRKFLATQVIEAYVGDNAKLELNCLEETHLKNVRVSNVYIEQQSNS 254
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
++ ++R+ + + G +E L+ +V+D+ Q + + +++H G C
Sbjct: 255 RVSHNIITLHNGVTRNKLDLTFSGEGSECFLNG--CVVADKHQHVDNNTVINHAVGNCTS 312
Query: 357 RQLHKCIV-AHSLG 369
QL+K ++ H++G
Sbjct: 313 NQLYKYVLDDHAVG 326
>gi|419277996|ref|ZP_13820254.1| feS assembly protein SufD [Escherichia coli DEC10E]
gi|419375543|ref|ZP_13916574.1| feS assembly protein SufD [Escherichia coli DEC14B]
gi|378130776|gb|EHW92139.1| feS assembly protein SufD [Escherichia coli DEC10E]
gi|378221612|gb|EHX81858.1| feS assembly protein SufD [Escherichia coli DEC14B]
Length = 423
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 36/305 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRY--- 93
Query: 142 ALNLSNLPDGVY-VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAG 200
+S L D + G + ++D + V D I ++F + A + I V G
Sbjct: 94 ---VSALSDAIEGSGYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRG 145
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWAN 259
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++
Sbjct: 146 QRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTG 200
Query: 260 SVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
+ + + ++H L + S + AH TA + + GG + RHN
Sbjct: 201 ARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNT 257
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 374
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+
Sbjct: 258 STQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFN 314
Query: 375 GNVKV 379
G + V
Sbjct: 315 GLINV 319
>gi|380511422|ref|ZP_09854829.1| iron ABC transporter permease [Xanthomonas sacchari NCPPB 4393]
Length = 420
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 140/307 (45%), Gaps = 32/307 (10%)
Query: 55 SLEDSLPSS---SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQ 109
+L DSL ++ ++ PL Q LRD P + E +++T + +S
Sbjct: 3 ALLDSLAAAFHGDAARRAPLE-QALRDG---------LPGTRSETWKYTSLRALERRSFA 52
Query: 110 IQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGV---YVGSLLGVSDGIMK 166
P + P + P LV ++G ++ +LS LP GV + ++L D M+
Sbjct: 53 AAPQSAPVVDAALLDGIPAPRLVFVNGRASDALSDLSGLPAGVELQRLSTILRSGDDAMR 112
Query: 167 RVSDFISE-FQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
F+ F+ D +F +N A + V+ V AG +VE P++L ++S ++
Sbjct: 113 ----FLGRRFERSDEVFARLNAALADEGSVLRVDAGVRVELPLHLVFVSTA-----AEAD 163
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ R ++ + + + ++E + G+ + +NS+ V + G ++ H+ +Q+++
Sbjct: 164 LAWHHRHLIELRQDAALAVVEHHL-HAGDAAHLSNSLAHVHLAAGAQLTHARVQDEAAGV 222
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
+ T + Y V++ GG L RH ++V+ G + L + +L+ + +
Sbjct: 223 TALLRTDAVLARDAQYRRVDLELGGALVRHELNVRLEGDN--ARLVANGVLLGNGRRQFD 280
Query: 345 SRLLLDH 351
+RL ++H
Sbjct: 281 TRLGIEH 287
>gi|281424961|ref|ZP_06255874.1| FeS assembly protein SufD [Prevotella oris F0302]
gi|281400805|gb|EFB31636.1| FeS assembly protein SufD [Prevotella oris F0302]
Length = 447
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 130/301 (43%), Gaps = 31/301 (10%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQ 127
PL +RD + + +P+RK E +++TD + + + + + P + D +
Sbjct: 25 PLNAVRDRAFADFKAQGFPTRKVERYKYTDMAALFAPDYGLNLNRLAIPVNPYD-AFKCD 83
Query: 128 FPSLVLIDGFIQNSALNLSNLPD-----GVYVGSLLGVSDGIMKRVSDFISEFQC----- 177
P+L FI N + LP GV V SL ++ DFI+++
Sbjct: 84 VPNLSTSLYFIVNDSFYSQKLPQVQLPAGVIVDSLRHIA----AEKPDFIAKYYARIAAT 139
Query: 178 -GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D ++N M A D +YVP KV+ I + +++ +VD + N RV+V++E
Sbjct: 140 HEDAVTALNTMLAQDGLFVYVPKNVKVDRTIQI--INILRADVD----LMVNRRVLVVME 193
Query: 237 EGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
+G E ++ F +D + + V+E +G + + L+ L + + Q+
Sbjct: 194 QGAEAKLL--FCDHATDDRKFLSTQVIEAYVGDNASLELNCLEETHLKNVRVSNVYIEQQ 251
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S ++ ++R+ + + G E + +V+D+ Q + + L+DH +
Sbjct: 252 ANSRVNHNVITLHNGVTRNRLDLVFKGEGAECHCNG--CVVADKQQHVDNNTLIDHQVPH 309
Query: 356 C 356
C
Sbjct: 310 C 310
>gi|300727479|ref|ZP_07060870.1| FeS assembly protein SufD [Prevotella bryantii B14]
gi|299775182|gb|EFI71783.1| FeS assembly protein SufD [Prevotella bryantii B14]
Length = 431
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 136/318 (42%), Gaps = 32/318 (10%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI----KSSQIQPITRPSSSLDVSTDAQ 127
PL +RD + + +PS+K E +++T+ + + + P + D +
Sbjct: 9 PLNAIRDKAFEDFKKQGFPSKKVERYKYTNMDKLFEPDYGLNLNRLEIPVNPYD-AFRCD 67
Query: 128 FPSLVLIDGFIQNSALNL-----SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---D 179
P+L F+ N A + LP+GV V SL V+ + V+ + + Q D
Sbjct: 68 VPNLSTSLYFVVNDAFYTKAQPKTTLPEGVIVASLSHVAATCPELVAKYYGK-QAKTEED 126
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
++N M A D ++YVP K++ + + +++ +VD + N RV++++EEG
Sbjct: 127 AITALNTMLAQDGLMVYVPKNVKIDRAV--QVVNILRSDVD----LMINRRVLIVLEEGA 180
Query: 240 EVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
E + F +D + V+E +G+ K+ + L+ L + + Q+ S
Sbjct: 181 EATFL--FCDDSADDRNFLTTQVIEAFVGENAKLELNCLEETHLKNTRVSNVYIEQQANS 238
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
++ ++R+ + + G E + + D+ Q + + L+DH +C
Sbjct: 239 RVYHNVITLHNGITRNKLDLVFKGEGAECYCNG--CAIEDKNQHVDNNTLIDHQVPHCD- 295
Query: 359 LHKCIVAHSLGQAVFDGN 376
+H L + V D N
Sbjct: 296 ------SHELYKYVLDEN 307
>gi|424887762|ref|ZP_18311365.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393173311|gb|EJC73355.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 424
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 132/319 (41%), Gaps = 30/319 (9%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
LP + LRD L P+R+ E + +TD + T P D ++A
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TLPPQVGDAGSNA 80
Query: 127 QFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFISEFQCGDL 180
P L+DG IQ A N DG+ V + S+ ++ +D + D
Sbjct: 81 LEP---LVDGSAVLAVIQGHA-NQKAAADGLGVSAY---SEHLLDGSAADGLDALGSDDA 133
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
ING D V+ VPA +++ P+ +++ V G +LP++ G +
Sbjct: 134 VGRINGSFVRDGYVVDVPADTELDAPLEIQF--VHAGGQAHTRLPVT-------FGAGVK 184
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
+IE + G D + V ++ +G+G ++ LQ Q + H+ + +
Sbjct: 185 ATVIERHLAVTG-DAALVSHVSDIAVGEGAELTWIILQQQGADDTHLGQIRIDLGVNAKL 243
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L ++ GGKL R +H++ G + L +LL ++ D+ L D P ++
Sbjct: 244 RLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTGSTEVI 303
Query: 361 KCIVAHSLGQAVFDGNVKV 379
+ +V + VF G ++V
Sbjct: 304 RNVV-FDRAKGVFQGMIRV 321
>gi|417104050|ref|ZP_11961280.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
gi|327191055|gb|EGE58108.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
Length = 424
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 133/337 (39%), Gaps = 42/337 (12%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ LP + LRD L P+R+ E + +TD + +
Sbjct: 15 ALIEAFNQQIGDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTD--------FKNLL 66
Query: 115 R--PSSSLDVSTDAQFP------SLVLIDGFIQNSA----LNLSNLPDGVYVGSLLGVSD 162
R PS + D +D P L +I G A L +S + + GS G D
Sbjct: 67 RGLPSQAGDAGSDPLEPLVAGSSVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAGGLD 126
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ D ING D V+ VP +E+P+ +++ + G
Sbjct: 127 AL-----------GGDDAVGRINGSFVRDGYVVDVPDNTDLEDPLEIQF--IHAGGQTHT 173
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+LP+S G + +IE G D + + + ++ +GKG ++ LQ Q
Sbjct: 174 RLPVS-------FGAGVQATVIERHRAVTG-DAAFVSHISDITVGKGTELTWIILQQQGA 225
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
+ AH+ + + L ++ GGKL R +H++ G + L +LL +D D
Sbjct: 226 DDAHLGQIRIDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTD 285
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ L D P ++ + +V + VF G ++V
Sbjct: 286 VTMVLGHDVPHTGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|432861809|ref|ZP_20086569.1| FeS cluster assembly protein sufD [Escherichia coli KTE146]
gi|431405556|gb|ELG88789.1| FeS cluster assembly protein sufD [Escherichia coli KTE146]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPVKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|432441097|ref|ZP_19683438.1| FeS cluster assembly protein sufD [Escherichia coli KTE189]
gi|433013821|ref|ZP_20202183.1| FeS cluster assembly protein sufD [Escherichia coli KTE104]
gi|430966938|gb|ELC84300.1| FeS cluster assembly protein sufD [Escherichia coli KTE189]
gi|431531807|gb|ELI08462.1| FeS cluster assembly protein sufD [Escherichia coli KTE104]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTVRINSLAMPVKNEVCDTRTR--LEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|340351752|ref|ZP_08674655.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella pallens ATCC 700821]
gi|339616966|gb|EGQ21601.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella pallens ATCC 700821]
Length = 447
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 144/326 (44%), Gaps = 32/326 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQF 128
L K+RD + + +P++K E +++TD S + + +Q + P + +
Sbjct: 26 LNKVRDKAFEDFKRQGFPTKKMERYKYTDISKLFAPDYGLNLQRLKMPINPYE-EFKCDV 84
Query: 129 PSLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGV----SDGIMKRVSDFISEFQCGD 179
P L F+ N LP DG+ V S L S+ I K + + D
Sbjct: 85 PDLNTSLYFVVNDQFYTDQLPKPQLNDGIVVDSFLNALKTHSEIITKHYAKLADTAK--D 142
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+ N M A D +YVP K + I + +++ +V+ + N R+++++E+G
Sbjct: 143 ALTAFNTMLAQDGLFVYVPKDVKADRTI--QVINILRSDVN----LMLNRRILIVLEDGA 196
Query: 240 EVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
E+ ++ F +D + A V+E +G K+ + L+ L I + Q+ S
Sbjct: 197 ELSML--FCDDSADDRKFLATQVIEAYVGNNAKLELNCLEETHLKNVRISNVYIDQQKNS 254
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
++ ++R+ + + G +E L+ +V+D+ Q + + +++H G C
Sbjct: 255 RVSHNIITLHNGVTRNKLDLTFSGEGSECFLNG--CVVADKHQHVDNNTVINHSVGNCTS 312
Query: 357 RQLHKCIV-AHSLGQAVFDGNVKVNR 381
QL+K ++ H++G F G V V +
Sbjct: 313 NQLYKYVLDDHAVG--AFAGLVYVAK 336
>gi|349685693|ref|ZP_08896835.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
oboediens 174Bp2]
Length = 424
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 35/264 (13%)
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS---DGIMKRVSDFISEFQCGDLFW 182
A +V ++G+ + S LP GV + +L + DGI GD+
Sbjct: 86 AAASRVVFVNGYFD---VGRSRLPTGVKISTLAAGTLPDDGIDP----------AGDVTT 132
Query: 183 SINGMGAPDLGVIYVP----AGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEE 237
++N + A D + VP AGC L +S+ + + P+S +PR ++VE
Sbjct: 133 ALNTVLARDGLELVVPEGVDAGC-------LLLVSI---GMTQEAAPVSFHPRHRIVVET 182
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
GG + +++ VG+ Y N + ++ + + G + H+ +Q + A H+ + R
Sbjct: 183 GGRLALLDASVGR---GQYLHNPLYDIAVAQQGYLSHARIQAEGKQAVHLAVSHARVAAG 239
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
Y+ ++ G LSRH VH ++ LL Q DL S + P R
Sbjct: 240 GVYDSFTLTLGASLSRHEVHAGLTQAGASVHVNGAQLLSGHQHGDLTSVITHAAPDCVSR 299
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
Q K +++ + VF G + V R
Sbjct: 300 QTIKNVLSDQ-ARGVFQGKILVER 322
>gi|282879388|ref|ZP_06288131.1| FeS assembly protein SufD [Prevotella buccalis ATCC 35310]
gi|281298501|gb|EFA90927.1| FeS assembly protein SufD [Prevotella buccalis ATCC 35310]
Length = 447
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 139/315 (44%), Gaps = 30/315 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTD 125
+ +RD++ + +PSRK E +R+TD + + +++ +P + S
Sbjct: 27 MNDVRDAAFEDFKRQGFPSRKVERYRYTDMAALFEPNYGLNLNRLDIPVKPYEAFKCSVP 86
Query: 126 AQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLF 181
SL I D F AL + LP+GV V SL V++ + VS + ++ D
Sbjct: 87 NLSTSLYFIVNDAF-HAKALPKATLPEGVIVDSLQKVANTHPQLVSKYYAQLAETKDDAI 145
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N M A D IYVP K++ + + +++ +VD + N RV+++++EG E
Sbjct: 146 TALNTMLAQDGLFIYVPKRVKIDRAV--QVVNLLRSDVD----LMVNRRVLIVLDEGAEA 199
Query: 242 GIIEEFVGKEGNDCYW-ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
+ F +D ++ A V+E +G+ + ++ + + V Q+ S +
Sbjct: 200 KFL--FCDHTMDDKHFLATQVIEAYVGENASLDLYCMEETHEHNTRVSNVYVEQQANSHF 257
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
++ ++R+ +++ G + +++D+ Q + + + H +C
Sbjct: 258 NHNVLTLHNGITRNQLNLVFRGEGASCCCNG--CVIADKKQHVDNNTFIRHAVPHCE--- 312
Query: 361 KCIVAHSLGQAVFDG 375
+H L + V DG
Sbjct: 313 ----SHELYKYVLDG 323
>gi|331663159|ref|ZP_08364069.1| FeS assembly protein SufD [Escherichia coli TA143]
gi|331058958|gb|EGI30935.1| FeS assembly protein SufD [Escherichia coli TA143]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L +++DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTSDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLRDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|193065302|ref|ZP_03046374.1| FeS assembly protein SufD [Escherichia coli E22]
gi|194429495|ref|ZP_03062017.1| FeS assembly protein SufD [Escherichia coli B171]
gi|260843987|ref|YP_003221765.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|415794916|ref|ZP_11496663.1| feS assembly protein SufD [Escherichia coli E128010]
gi|417172717|ref|ZP_12002750.1| FeS assembly protein SufD [Escherichia coli 3.2608]
gi|417184815|ref|ZP_12010349.1| FeS assembly protein SufD [Escherichia coli 93.0624]
gi|417252026|ref|ZP_12043789.1| FeS assembly protein SufD [Escherichia coli 4.0967]
gi|417623366|ref|ZP_12273673.1| feS assembly protein SufD [Escherichia coli STEC_H.1.8]
gi|419289574|ref|ZP_13831669.1| feS assembly protein SufD [Escherichia coli DEC11A]
gi|419294864|ref|ZP_13836910.1| feS assembly protein SufD [Escherichia coli DEC11B]
gi|419300223|ref|ZP_13842225.1| feS assembly protein SufD [Escherichia coli DEC11C]
gi|419306322|ref|ZP_13848226.1| feS assembly protein SufD [Escherichia coli DEC11D]
gi|419311344|ref|ZP_13853212.1| feS assembly protein SufD [Escherichia coli DEC11E]
gi|419316670|ref|ZP_13858485.1| feS assembly protein SufD [Escherichia coli DEC12A]
gi|419322773|ref|ZP_13864486.1| feS assembly protein SufD [Escherichia coli DEC12B]
gi|419328815|ref|ZP_13870432.1| feS assembly protein SufD [Escherichia coli DEC12C]
gi|419334373|ref|ZP_13875917.1| feS assembly protein SufD [Escherichia coli DEC12D]
gi|419339938|ref|ZP_13881415.1| feS assembly protein SufD [Escherichia coli DEC12E]
gi|419869320|ref|ZP_14391524.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O103:H2 str. CVM9450]
gi|420391358|ref|ZP_14890615.1| feS assembly protein SufD [Escherichia coli EPEC C342-62]
gi|192927096|gb|EDV81718.1| FeS assembly protein SufD [Escherichia coli E22]
gi|194412459|gb|EDX28759.1| FeS assembly protein SufD [Escherichia coli B171]
gi|257759134|dbj|BAI30631.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|323163469|gb|EFZ49295.1| feS assembly protein SufD [Escherichia coli E128010]
gi|345380007|gb|EGX11913.1| feS assembly protein SufD [Escherichia coli STEC_H.1.8]
gi|378131505|gb|EHW92862.1| feS assembly protein SufD [Escherichia coli DEC11A]
gi|378141951|gb|EHX03153.1| feS assembly protein SufD [Escherichia coli DEC11B]
gi|378149757|gb|EHX10877.1| feS assembly protein SufD [Escherichia coli DEC11D]
gi|378152193|gb|EHX13294.1| feS assembly protein SufD [Escherichia coli DEC11C]
gi|378159001|gb|EHX20015.1| feS assembly protein SufD [Escherichia coli DEC11E]
gi|378169429|gb|EHX30327.1| feS assembly protein SufD [Escherichia coli DEC12B]
gi|378171922|gb|EHX32784.1| feS assembly protein SufD [Escherichia coli DEC12A]
gi|378172572|gb|EHX33423.1| feS assembly protein SufD [Escherichia coli DEC12C]
gi|378186586|gb|EHX47209.1| feS assembly protein SufD [Escherichia coli DEC12D]
gi|378191404|gb|EHX51980.1| feS assembly protein SufD [Escherichia coli DEC12E]
gi|386180415|gb|EIH57889.1| FeS assembly protein SufD [Escherichia coli 3.2608]
gi|386183284|gb|EIH66033.1| FeS assembly protein SufD [Escherichia coli 93.0624]
gi|386217601|gb|EII34086.1| FeS assembly protein SufD [Escherichia coli 4.0967]
gi|388342525|gb|EIL08559.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O103:H2 str. CVM9450]
gi|391313123|gb|EIQ70716.1| feS assembly protein SufD [Escherichia coli EPEC C342-62]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPFLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|366157697|ref|ZP_09457559.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. TW09308]
gi|432372100|ref|ZP_19615150.1| FeS cluster assembly protein sufD [Escherichia coli KTE11]
gi|430898429|gb|ELC20564.1| FeS cluster assembly protein sufD [Escherichia coli KTE11]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHEHWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV SL ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPSLSDTTEGSGYEVS--INDERQGLPDAIQPEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLAGDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|432792886|ref|ZP_20026971.1| FeS cluster assembly protein sufD [Escherichia coli KTE78]
gi|432798844|ref|ZP_20032867.1| FeS cluster assembly protein sufD [Escherichia coli KTE79]
gi|431339630|gb|ELG26684.1| FeS cluster assembly protein sufD [Escherichia coli KTE78]
gi|431343711|gb|ELG30667.1| FeS cluster assembly protein sufD [Escherichia coli KTE79]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|417138476|ref|ZP_11982209.1| FeS assembly protein SufD [Escherichia coli 97.0259]
gi|417308124|ref|ZP_12094979.1| FeS cluster assembly protein sufD [Escherichia coli PCN033]
gi|338770330|gb|EGP25095.1| FeS cluster assembly protein sufD [Escherichia coli PCN033]
gi|386158461|gb|EIH14798.1| FeS assembly protein SufD [Escherichia coli 97.0259]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|425288548|ref|ZP_18679417.1| feS assembly protein SufD [Escherichia coli 3006]
gi|408215126|gb|EKI39530.1| feS assembly protein SufD [Escherichia coli 3006]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|218699754|ref|YP_002407383.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli IAI39]
gi|386624299|ref|YP_006144027.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
O7:K1 str. CE10]
gi|218369740|emb|CAR17511.1| component of SufBCD complex [Escherichia coli IAI39]
gi|349738037|gb|AEQ12743.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
O7:K1 str. CE10]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAHSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|418936150|ref|ZP_13489887.1| FeS assembly protein SufD [Rhizobium sp. PDO1-076]
gi|375057133|gb|EHS53320.1| FeS assembly protein SufD [Rhizobium sp. PDO1-076]
Length = 425
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 137/329 (41%), Gaps = 27/329 (8%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR 115
L D+ + SLP + RD TL P+R+ E F +TD ++ + R
Sbjct: 16 LIDAYTNQIGSLPGDGAVLLQRDGLFDTLKRQGLPTRRVESFHYTD--------LKALLR 67
Query: 116 PSSSLDVSTDAQFPSLVLIDGFI----QNSALNLSNLPDGVYVGSLL-GVSDGIMKRVSD 170
+ ++S A+ ++ + + Q A + +LP+G+ V + + DG +
Sbjct: 68 ALPADEISAVAEGVRPIVTNATVLAIRQGVAQDAGSLPEGLTVTAYRDSLKDG---SAAP 124
Query: 171 FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
++ + D ING D + + G ++E I L+ + G L + P
Sbjct: 125 ALTAYNSEDTIGRINGAFVRDGFSLEIADGAEIEELIELQSVHAAG------HLHLRFP- 177
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
+G + I+E VG+ + A V ++ +G G +V LQ + +H+
Sbjct: 178 --ATFGKGAKATIVERHVGQS-DSAALATVVADLTLGDGAEVTWVILQGEGDADSHLGQI 234
Query: 291 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 350
+ + L ++ GGKL R VHV+ G ++ L + +LL D D+ L +
Sbjct: 235 RADLGPNAKFRLFIINAGGKLVRQEVHVKTTGEGSDFTLRAVNLLGGDTHTDVTMTLGHN 294
Query: 351 HPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
P ++ + IV + VF G ++V
Sbjct: 295 VPHTTSTEIIRNIV-FDRAKGVFQGMIRV 322
>gi|344206411|ref|YP_004791552.1| FeS assembly protein SufD [Stenotrophomonas maltophilia JV3]
gi|343777773|gb|AEM50326.1| FeS assembly protein SufD [Stenotrophomonas maltophilia JV3]
Length = 420
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 136/318 (42%), Gaps = 12/318 (3%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVS 123
S+ Q R L P+ ++E +++T + +S P+ P+ +
Sbjct: 7 SMAQAFCGSDARREVLDAALRDGLPAARNEAWKYTSLRQLERRSFAAAPLQGPALDAALL 66
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFW 182
D P LV ++G + + ++ LP GV + L V ++ ++F
Sbjct: 67 EDIPAPRLVFVNGRLDAALSDVQALPAGVQLQPLSAALAAGEDAVRFLGRRYERSEEVFA 126
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N + V+ V G +VE P+ L + SV G + + R ++ + G +G
Sbjct: 127 RLNAALTDEGVVLRVDEGVQVEAPLQLVFASVAG-----ETDLAWHHRHLIELRAGASLG 181
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E G+ + N+VL + + ++H+ +Q S T + Y
Sbjct: 182 VVEHRFSV-GDSAHLDNTVLHAHVARDAVLKHARVQAGSARQTSFLRTDAVLARDAQYHR 240
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHK 361
V++ G LSRH ++V+ G + +L++ +L+ + + + +RL +DH R +L
Sbjct: 241 VDLELGAALSRHELNVRLEGDN--AQLTANGVLLGNGRRHVETRLGIDHIARDTSCELLW 298
Query: 362 CIVAHSLGQAVFDGNVKV 379
VA + + VF G +++
Sbjct: 299 RGVAANRSRVVFHGGIQI 316
>gi|432392089|ref|ZP_19634929.1| FeS cluster assembly protein sufD [Escherichia coli KTE21]
gi|430919906|gb|ELC40826.1| FeS cluster assembly protein sufD [Escherichia coli KTE21]
Length = 423
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAHSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + I ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINIAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|126662697|ref|ZP_01733696.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
gi|126626076|gb|EAZ96765.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
Length = 438
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 143/342 (41%), Gaps = 19/342 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L E + S + + L +LR ++ + + +P++K+E +++T + I +
Sbjct: 1 MELKEKMLASFMAFEEKIDTNSELHELRSNAIKNFENKGFPTKKEEAWKYTSLNSILKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ ++++ +F +V IDG S+ S DG+ V + ++
Sbjct: 61 FSVFPKKENTIEFKDVKKFFLHEVDTYKVVFIDGIF--SSFLSSTTHDGLDVCLMSSALT 118
Query: 162 DGIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K + D F D S+N + + + +P VE PI + Y S GN
Sbjct: 119 KPKYKMIIDTYFNQIANKEDSLTSLNTAFSLEGAYVNIPKSKVVEKPIEIIYFST--GN- 175
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ ++ PR +++V E V I+E N NSV EV K V + +QN
Sbjct: 176 --EAALMTQPRNLIIVGENAHVQIVERHQSLNSNPV-LTNSVTEVYAQKRAIVDYYKVQN 232
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
A + T + Q+ S + S GG ++R+N++ G ++ L ++ Q
Sbjct: 233 DVQTANLVDNTYIAQKQESRVSVHTFSFGGNITRNNLNFYHQGERIDSTLKGITIIGDKQ 292
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K I+ S VF+G + V +
Sbjct: 293 HVDHYTLVQHATPNCESHQNYKTILNDS-STGVFNGKIFVEK 333
>gi|432553647|ref|ZP_19790374.1| FeS cluster assembly protein sufD [Escherichia coli KTE47]
gi|431084947|gb|ELD91070.1| FeS cluster assembly protein sufD [Escherichia coli KTE47]
Length = 423
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSYHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|430003785|emb|CCF19576.1| putative iron-sulfur cluster assembly protein [Rhizobium sp.]
Length = 425
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 132/328 (40%), Gaps = 45/328 (13%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSL 120
SLP + RD L ++ P+R+ E + +TD + S+ + P P +SL
Sbjct: 26 SLPGNGAVAGTRDRLLDDLKTSGLPTRRVESWHYTDLRTLLRAVPASNVVAPTIEPVASL 85
Query: 121 -------DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
V A PS V++DG +S+ D + G+ + + R D
Sbjct: 86 IEGATVLPVLQGAAAPS-VIVDG------AEVSSFADTLVSGA---AAQSLTARDKD--- 132
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
D ING D I VPAG VE PI L+ L G + P++
Sbjct: 133 -----DAIGKINGSFVCDGYQINVPAGATVETPIELQAL--HGAGQVHTRFPVT------ 179
Query: 234 LVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
G I+E G D + +S+ ++ + +G V LQ Q + H+ VR
Sbjct: 180 -FGAGSRATIVERHRSVTG-DAAFISSISDLTLEEGADVVWVILQEQGADDTHLGQIRVR 237
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-- 351
+ +L V+ GGKL R + + G +E L +LL + D+ L+L H
Sbjct: 238 FAAEAKLKLFVVNVGGKLVRQELRIDVEGEGSELTLRGVNLLGQETHTDV--TLVLGHNV 295
Query: 352 PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
P ++ + +V + VF G ++V
Sbjct: 296 PHTSSTEIIRNVV-FDRARGVFQGMIRV 322
>gi|262340816|ref|YP_003283671.1| FeS assembly protein [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272153|gb|ACY40061.1| FeS assembly protein [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 434
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS--VEGGNVDSKKLPISNPRVVVLVE 236
D+F+++N + + D IY+P +E PI + ++S +E G + + N R +++V
Sbjct: 137 DVFYTLNTLFSKDGVYIYIPDNIVLERPIEILHISTGLESGRI------MLNSRNLIVVG 190
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
E +V IIE + + + NSV E+ ++ + +Q+ S I T ++Q+
Sbjct: 191 ERSDVKIIEHHKSLKKHLAF-INSVSEIYASNYSRIDYYKVQDNSDETFIIDNTFLKQKK 249
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRG 354
S + S G R+N+ G T + L LL Q D H+ L+DH
Sbjct: 250 HSQCSVWTFSFQGNFIRNNLKFYSRGEKTSSYLYGISLLSEKQLVDHHT--LIDHFYSNA 307
Query: 355 YCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Y QL+K I+ + +F+G + VN
Sbjct: 308 YSYQLYKNILFDQ-SKGIFNGKIIVNE 333
>gi|400405084|ref|YP_006587943.1| FeS assembly protein SufD [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400363447|gb|AFP84515.1| FeS assembly protein SufD [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 423
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 8/189 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +PA + P+YL L + G+ D K L + + R + + G + +IE FV N
Sbjct: 144 IRLPARKVSKRPLYL--LQISQGSKDKKALHMLHYRHHLDIGIGAQGKVIEHFVSI-NNQ 200
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
+++ + + +G K+ H L +S + H + + G L+RH
Sbjct: 201 GHFSGARTSITVGDSAKLSHVKLAFESRASYHFSHNDITLGRDAVVHSSAFILGAGLTRH 260
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
Q G ++ ++S L D+ R L+H +GYC RQLHK ++A G+ V
Sbjct: 261 QTSAQLNGEGSDLAINSLLLPSERDISDI--RTYLEHNKGYCISRQLHK-VIARDHGKGV 317
Query: 373 FDGNVKVNR 381
F+G +KV +
Sbjct: 318 FNGLIKVAK 326
>gi|340794429|ref|YP_004759892.1| Fe-S cluster assembly ABC transporter permease [Corynebacterium
variabile DSM 44702]
gi|340534339|gb|AEK36819.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Corynebacterium variabile DSM 44702]
Length = 492
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G VE P+ Y + N+ + R +++V+EG V +E
Sbjct: 213 VYVPKGVHVEIPLQ-AYFRINTENMGQFE------RTLIIVDEGAFVHYVEGCTAPIYQS 265
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++++E+++ KGG+ R++ +QN S N ++ R E + E V+ + G K++
Sbjct: 266 DSLHSAIVEIIVKKGGRCRYTTIQNWSTNVYNLVTQRCRAEEGATMEWVDGNIGSKITMK 325
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + + S QTQD +++ P + K VA + G+A +
Sbjct: 326 YPAVWMTGPHAKGTVLSIGFAGEGQTQDTGGKMVHMAPYTSSTIVSKS-VARNGGRAAYR 384
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 385 GLVQVNK 391
>gi|427702811|ref|YP_007046033.1| FeS assembly protein SufD [Cyanobium gracile PCC 6307]
gi|427345979|gb|AFY28692.1| FeS assembly protein SufD [Cyanobium gracile PCC 6307]
Length = 426
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 123/312 (39%), Gaps = 54/312 (17%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS 146
TP PSR+ E +RFTD + P+T S +L S A P + G ++ LNL
Sbjct: 53 TPLPSRRVEAWRFTD--------LAPLTALSPTLLSSAPAAQPEVA--AGSLR---LNLD 99
Query: 147 NLPDGVYVGSLLGVS--DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE 204
L D L G+S G+ + +S LG + G
Sbjct: 100 GLSD-----PLAGISLPAGLEPISGEELSAI----------------LGQVLAATGSAEL 138
Query: 205 NPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE-VGI--------------IEEFVG 249
P+ L + NV + ++ + + LV + G+ GI +E
Sbjct: 139 WPVLLNGATAR--NVLALRVRGAIATTLELVSDAGDGEGILPLRLLLVLEPEASLEVLQV 196
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
+ + VLE +G+G ++RH L + + A+ Q T S Y V G
Sbjct: 197 HRSSGANLTSVVLEARLGEGAELRHGLLAPGADTGCLLATVALEQATGSRYSGVSAHGGW 256
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLG 369
L R + Q + L + L Q D HS+++ + P G QLHK VA G
Sbjct: 257 ALGRLEPRLVQSEGAAHSALKALQLADGRQISDTHSQMVFEGPDGRLEQLHKA-VADGQG 315
Query: 370 QAVFDGNVKVNR 381
++VF+G V+V R
Sbjct: 316 RSVFNGAVQVPR 327
>gi|417702397|ref|ZP_12351517.1| feS assembly protein SufD [Shigella flexneri K-218]
gi|333004018|gb|EGK23553.1| feS assembly protein SufD [Shigella flexneri K-218]
Length = 423
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + SL ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDSLALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L +++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|387607302|ref|YP_006096158.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli 042]
gi|284921602|emb|CBG34674.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli 042]
Length = 423
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IVVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|418996783|ref|ZP_13544383.1| feS assembly protein SufD [Escherichia coli DEC1A]
gi|377845400|gb|EHU10422.1| feS assembly protein SufD [Escherichia coli DEC1A]
Length = 407
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG +
Sbjct: 23 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 80
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 81 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 130
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 131 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 185
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 186 RFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 242
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 243 TQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 299
Query: 376 NVKV 379
+ V
Sbjct: 300 LINV 303
>gi|417755680|ref|ZP_12403764.1| feS assembly protein SufD [Escherichia coli DEC2B]
gi|419002076|ref|ZP_13549613.1| feS assembly protein SufD [Escherichia coli DEC1B]
gi|419007591|ref|ZP_13555034.1| feS assembly protein SufD [Escherichia coli DEC1C]
gi|419013516|ref|ZP_13560871.1| feS assembly protein SufD [Escherichia coli DEC1D]
gi|419018276|ref|ZP_13565590.1| feS assembly protein SufD [Escherichia coli DEC1E]
gi|419023979|ref|ZP_13571210.1| feS assembly protein SufD [Escherichia coli DEC2A]
gi|419028878|ref|ZP_13576052.1| feS assembly protein SufD [Escherichia coli DEC2C]
gi|419034455|ref|ZP_13581546.1| feS assembly protein SufD [Escherichia coli DEC2D]
gi|377847408|gb|EHU12409.1| feS assembly protein SufD [Escherichia coli DEC1C]
gi|377850007|gb|EHU14975.1| feS assembly protein SufD [Escherichia coli DEC1B]
gi|377858500|gb|EHU23339.1| feS assembly protein SufD [Escherichia coli DEC1D]
gi|377863218|gb|EHU28024.1| feS assembly protein SufD [Escherichia coli DEC1E]
gi|377865460|gb|EHU30251.1| feS assembly protein SufD [Escherichia coli DEC2A]
gi|377875931|gb|EHU40539.1| feS assembly protein SufD [Escherichia coli DEC2B]
gi|377881085|gb|EHU45649.1| feS assembly protein SufD [Escherichia coli DEC2C]
gi|377881525|gb|EHU46082.1| feS assembly protein SufD [Escherichia coli DEC2D]
Length = 423
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG +
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|170024089|ref|YP_001720594.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis YPIII]
gi|169750623|gb|ACA68141.1| FeS assembly protein SufD [Yersinia pseudotuberculosis YPIII]
Length = 441
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +P G + P+YL L + GN DS + S+ R ++VE + +IE FV
Sbjct: 158 IRLPVGQHSDKPLYL--LHISSGN-DSDMVNTSHSRHHLVVEANAQAEVIEHFVSL-NEQ 213
Query: 255 CYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G ++ H ++ +S + AH R A + + G L
Sbjct: 214 PHFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGL 270
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G
Sbjct: 271 TRHNTSSQLNGEGSSLSMNSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMVR-ERG 327
Query: 370 QAVFDGNVKVNR 381
+A+F+G +KV +
Sbjct: 328 KAIFNGMIKVAK 339
>gi|432446218|ref|ZP_19688517.1| FeS cluster assembly protein sufD [Escherichia coli KTE191]
gi|432465671|ref|ZP_19707762.1| FeS cluster assembly protein sufD [Escherichia coli KTE205]
gi|432583773|ref|ZP_19820174.1| FeS cluster assembly protein sufD [Escherichia coli KTE57]
gi|433023454|ref|ZP_20211455.1| FeS cluster assembly protein sufD [Escherichia coli KTE106]
gi|433072792|ref|ZP_20259458.1| FeS cluster assembly protein sufD [Escherichia coli KTE129]
gi|433120222|ref|ZP_20305901.1| FeS cluster assembly protein sufD [Escherichia coli KTE157]
gi|433183241|ref|ZP_20367507.1| FeS cluster assembly protein sufD [Escherichia coli KTE85]
gi|433324108|ref|ZP_20401426.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli J96]
gi|430972491|gb|ELC89459.1| FeS cluster assembly protein sufD [Escherichia coli KTE191]
gi|430994152|gb|ELD10483.1| FeS cluster assembly protein sufD [Escherichia coli KTE205]
gi|431116943|gb|ELE20215.1| FeS cluster assembly protein sufD [Escherichia coli KTE57]
gi|431537105|gb|ELI13253.1| FeS cluster assembly protein sufD [Escherichia coli KTE106]
gi|431589355|gb|ELI60570.1| FeS cluster assembly protein sufD [Escherichia coli KTE129]
gi|431643980|gb|ELJ11667.1| FeS cluster assembly protein sufD [Escherichia coli KTE157]
gi|431708131|gb|ELJ72655.1| FeS cluster assembly protein sufD [Escherichia coli KTE85]
gi|432347367|gb|ELL41827.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli J96]
Length = 423
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|432602201|ref|ZP_19838445.1| FeS cluster assembly protein sufD [Escherichia coli KTE66]
gi|431140775|gb|ELE42540.1| FeS cluster assembly protein sufD [Escherichia coli KTE66]
Length = 423
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|433678355|ref|ZP_20510226.1| Fe-S cluster assembly protein SufD [Xanthomonas translucens pv.
translucens DSM 18974]
gi|440733250|ref|ZP_20913010.1| iron ABC transporter permease [Xanthomonas translucens DAR61454]
gi|430816540|emb|CCP40700.1| Fe-S cluster assembly protein SufD [Xanthomonas translucens pv.
translucens DSM 18974]
gi|440363573|gb|ELQ00735.1| iron ABC transporter permease [Xanthomonas translucens DAR61454]
Length = 420
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 154/338 (45%), Gaps = 33/338 (9%)
Query: 55 SLEDSLPSS---SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+L DSL ++ + PL Q LRD P + E +++T ++
Sbjct: 3 ALLDSLAAAFHGDGARRAPLE-QALRDG---------LPGPRSEAWKYTSLRALERRSFS 52
Query: 112 PITRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGV---YVGSLLGVSDGIMK 166
P ++D + P+ LV ++G ++ +L+ LP GV + S+L D M+
Sbjct: 53 PAPSAVPTVDTAIVDGIPAPRLVFVNGRGSDALSDLAGLPAGVELQRLSSILRSGDDAMR 112
Query: 167 RVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+ F+ D +F +N A + V+ V AG +V P++L ++S G +
Sbjct: 113 FLG---RRFERSDEVFAQLNAALADEGSVLRVDAGVQVAVPLHLVFVSTTGAGDHAW--- 166
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ-NQSLNA 284
+ R ++ + + + ++E + G + +N++ V + G ++ H+ +Q + S
Sbjct: 167 --HHRHLIELRQDAALSLVEHHL-HLGEAAHLSNTLAHVHLAAGAQLTHARVQADASGVT 223
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
A ++ AV A Y +++ GG LSRH ++V+ G + L + +L+ + + +
Sbjct: 224 ALLRTDAVLARDAQ-YRRIDLELGGALSRHELNVRLEGDN--ARLVANGVLLGNGRRQID 280
Query: 345 SRLLLDH-PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+RL ++H R +L VA + + VF G + + +
Sbjct: 281 TRLGIEHIARDTACELLWRGVAAARSRVVFHGGIHIRQ 318
>gi|86357865|ref|YP_469757.1| ABC transporter involved in Fe-S cluster assembly, permease
[Rhizobium etli CFN 42]
gi|86281967|gb|ABC91030.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CFN 42]
Length = 424
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 130/318 (40%), Gaps = 28/318 (8%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTD 125
LP + LRD L P+R+ E + +TD ++++ IQ S L+
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDFKNLLRGLPIQAGDAGSDPLEPLV- 85
Query: 126 AQFPSLVLIDGFIQNSA----LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLF 181
A L +I G A L +S + + GS G D + D
Sbjct: 86 AGSSVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAGGLDAL-----------GSDDAV 134
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
ING D V+ VP ++E+P+ +++ + G +LP+S G +
Sbjct: 135 GRINGSFVRDGYVVDVPDDTELEDPLEIQF--IHAGGQTHTRLPVS-------FGAGVKA 185
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
+IE G D + + + ++ +GKG ++ LQ Q + H+ V T +
Sbjct: 186 TVIERHRAVTG-DAAFVSHISDITVGKGTELTWIILQQQGADDTHLGQIRVDLGTDAKLR 244
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 361
L ++ GGKL R +H++ G + L +LL ++ D+ L D P ++ +
Sbjct: 245 LFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTGSTEVIR 304
Query: 362 CIVAHSLGQAVFDGNVKV 379
+V + VF G ++V
Sbjct: 305 NVV-FDRAKGVFQGMIRV 321
>gi|387829594|ref|YP_003349531.1| hypothetical protein ECSF_1541 [Escherichia coli SE15]
gi|432500041|ref|ZP_19741801.1| FeS cluster assembly protein sufD [Escherichia coli KTE216]
gi|432694432|ref|ZP_19929639.1| FeS cluster assembly protein sufD [Escherichia coli KTE162]
gi|432919106|ref|ZP_20123237.1| FeS cluster assembly protein sufD [Escherichia coli KTE173]
gi|432926913|ref|ZP_20128453.1| FeS cluster assembly protein sufD [Escherichia coli KTE175]
gi|432981089|ref|ZP_20169865.1| FeS cluster assembly protein sufD [Escherichia coli KTE211]
gi|433096504|ref|ZP_20282702.1| FeS cluster assembly protein sufD [Escherichia coli KTE139]
gi|433105871|ref|ZP_20291862.1| FeS cluster assembly protein sufD [Escherichia coli KTE148]
gi|281178751|dbj|BAI55081.1| conserved hypothetical protein [Escherichia coli SE15]
gi|431028911|gb|ELD41943.1| FeS cluster assembly protein sufD [Escherichia coli KTE216]
gi|431234631|gb|ELF30025.1| FeS cluster assembly protein sufD [Escherichia coli KTE162]
gi|431444420|gb|ELH25442.1| FeS cluster assembly protein sufD [Escherichia coli KTE173]
gi|431445140|gb|ELH26067.1| FeS cluster assembly protein sufD [Escherichia coli KTE175]
gi|431491844|gb|ELH71447.1| FeS cluster assembly protein sufD [Escherichia coli KTE211]
gi|431617203|gb|ELI86223.1| FeS cluster assembly protein sufD [Escherichia coli KTE139]
gi|431629095|gb|ELI97461.1| FeS cluster assembly protein sufD [Escherichia coli KTE148]
Length = 423
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 48/313 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKVNR 381
G+AVF+G + V +
Sbjct: 309 GRAVFNGLINVTQ 321
>gi|415842111|ref|ZP_11522896.1| feS assembly protein SufD [Escherichia coli RN587/1]
gi|417283570|ref|ZP_12070867.1| FeS assembly protein SufD [Escherichia coli 3003]
gi|425277921|ref|ZP_18669187.1| feS assembly protein SufD [Escherichia coli ARS4.2123]
gi|323187105|gb|EFZ72421.1| feS assembly protein SufD [Escherichia coli RN587/1]
gi|386243513|gb|EII85246.1| FeS assembly protein SufD [Escherichia coli 3003]
gi|408203345|gb|EKI28400.1| feS assembly protein SufD [Escherichia coli ARS4.2123]
Length = 423
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|168822238|ref|ZP_02834238.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|409250319|ref|YP_006886130.1| Protein sufD [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|205341326|gb|EDZ28090.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320086147|emb|CBY95921.1| Protein sufD [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 423
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 146/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VDS +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDSDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|408823308|ref|ZP_11208198.1| FeS assembly protein SufD [Pseudomonas geniculata N1]
Length = 420
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 138/318 (43%), Gaps = 12/318 (3%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVS 123
S+ Q R L P+ ++E +++T + ++ P+ P+ +
Sbjct: 7 SMAQAFCGSDARREVLDAALRDGLPAARNEAWKYTSLRQLERRAFAAAPLQGPALDAALL 66
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFW 182
D P LV ++G + + ++ LP GV + L V ++ ++F
Sbjct: 67 DDIPAPRLVFVNGRLDAALSDVQALPAGVQLQPLSAALAAGEDAVRFLGRRYERSEEIFA 126
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N A + V+ V G +V+ P+ L + SV G+ D + R ++ + G +G
Sbjct: 127 RLNAALADEGVVLRVDEGVQVDVPLQLVFASV-AGDTDLAW----HHRHLIELRAGASLG 181
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
++E G+ + N+VL + + ++H+ +Q S T + Y
Sbjct: 182 VVEHRFSV-GDSAHLDNTVLHAHVARDAVLKHARVQAGSARQTSFLRTDAVLARDAQYHR 240
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHK 361
V++ G LSRH ++V+ G + +L++ +L+ + + + +RL +DH R +L
Sbjct: 241 VDLELGAALSRHELNVRLEGDN--AQLTANGVLLGNGRRHVETRLGIDHIARDTSCELLW 298
Query: 362 CIVAHSLGQAVFDGNVKV 379
VA + + VF G +++
Sbjct: 299 RGVAANRSRVVFHGGIQI 316
>gi|227833040|ref|YP_002834747.1| ABC transporter [Corynebacterium aurimucosum ATCC 700975]
gi|262182472|ref|ZP_06041893.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|227454056|gb|ACP32809.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
Length = 481
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G V+ P+ Y + N+ + R +++VEEG V IE N
Sbjct: 202 VYVPKGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVEEGAYVHYIEGCTAPIYNS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
V+E+++ KGG+ R++ +QN S N ++ + E E V+ + G K++
Sbjct: 255 DSLHTGVIEIIVKKGGRCRYTTIQNWSTNVYNLVTQRAKVEEGGTMEWVDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
G + E+ S +Q QD S+++ P + K VA + G+A +
Sbjct: 315 YPSCWLTGEHAKGEVLSLAFAADNQVQDTGSKMVHMAPNTSSNIVSKS-VARNGGRAAYR 373
Query: 375 GNVKVN 380
G V+VN
Sbjct: 374 GLVQVN 379
>gi|432850666|ref|ZP_20081361.1| FeS cluster assembly protein sufD [Escherichia coli KTE144]
gi|431399988|gb|ELG83370.1| FeS cluster assembly protein sufD [Escherichia coli KTE144]
Length = 423
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS-----SLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I S +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPHQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPGAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|225010410|ref|ZP_03700882.1| FeS assembly protein SufD [Flavobacteria bacterium MS024-3C]
gi|225005889|gb|EEG43839.1| FeS assembly protein SufD [Flavobacteria bacterium MS024-3C]
Length = 438
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 150/347 (43%), Gaps = 29/347 (8%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L ++ + + + P+ +R ++ + + +P++K E +++T ++
Sbjct: 1 MELKDKLVNAFMAFENQVDLDHPVHDVRSAAMKVFENQGFPTKKMEAWKYTSLKSLEKLD 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVG-SLLGVS 161
+ +++L+ ++ +V +DG S L + + G + +S
Sbjct: 61 FNIFPKEAATLEYKDVKKYFLHEVDTYKIVFVDGVYS------SFLSETTHQGIDVCLMS 114
Query: 162 DGIMKRVSDFISEFQCGDL------FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVE 215
+ K + I E + ++N + + I++P + PI + + +
Sbjct: 115 AALTKEMYKPIIEAYFNKVASKEENLTALNTAFSKEGAYIHIPKNTQAMKPIEIIHFAT- 173
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
++ + PR +V+VEE EV I+E N + N+V E+ K +
Sbjct: 174 ----GREQALLLQPRNLVVVEENAEVQILERHQSLSEN-AVFTNAVTEIFAAKSAIIDFY 228
Query: 276 YLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 335
+QN + +A+ + T + Q + S L S GGK++R+N++ Q G ++ + ++
Sbjct: 229 KVQNDNNSASLVDNTYIDQHSQSVVTLHTFSFGGKMTRNNLNFYQNGERIDSTMKGVTII 288
Query: 336 VSDQTQDLHSRLLLDHPRGYCRQLHKCIV-AHSLGQAVFDGNVKVNR 381
Q D H+ + P Q +K I +S G VF+G + V+R
Sbjct: 289 GDGQHVDHHTLVHHIQPNCESHQDYKGIYDGNSTG--VFNGKIMVDR 333
>gi|26247931|ref|NP_753971.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli CFT073]
gi|227885900|ref|ZP_04003705.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 83972]
gi|300994860|ref|ZP_07180973.1| FeS assembly protein SufD [Escherichia coli MS 45-1]
gi|301050988|ref|ZP_07197834.1| FeS assembly protein SufD [Escherichia coli MS 185-1]
gi|306815066|ref|ZP_07449222.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli NC101]
gi|386629372|ref|YP_006149092.1| cysteine desulfurase activator complex subunit [Escherichia coli
str. 'clone D i2']
gi|386634292|ref|YP_006154011.1| cysteine desulfurase activator complex subunit [Escherichia coli
str. 'clone D i14']
gi|386639210|ref|YP_006106008.1| FeS assembly protein SufD [Escherichia coli ABU 83972]
gi|416335805|ref|ZP_11672453.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
WV_060327]
gi|422366782|ref|ZP_16447239.1| FeS assembly protein SufD [Escherichia coli MS 153-1]
gi|432381354|ref|ZP_19624299.1| FeS cluster assembly protein sufD [Escherichia coli KTE15]
gi|432387108|ref|ZP_19629999.1| FeS cluster assembly protein sufD [Escherichia coli KTE16]
gi|432411900|ref|ZP_19654566.1| FeS cluster assembly protein sufD [Escherichia coli KTE39]
gi|432431833|ref|ZP_19674265.1| FeS cluster assembly protein sufD [Escherichia coli KTE187]
gi|432436147|ref|ZP_19678540.1| FeS cluster assembly protein sufD [Escherichia coli KTE188]
gi|432456711|ref|ZP_19698898.1| FeS cluster assembly protein sufD [Escherichia coli KTE201]
gi|432495702|ref|ZP_19737501.1| FeS cluster assembly protein sufD [Escherichia coli KTE214]
gi|432504411|ref|ZP_19746141.1| FeS cluster assembly protein sufD [Escherichia coli KTE220]
gi|432513921|ref|ZP_19751147.1| FeS cluster assembly protein sufD [Escherichia coli KTE224]
gi|432523787|ref|ZP_19760919.1| FeS cluster assembly protein sufD [Escherichia coli KTE230]
gi|432568678|ref|ZP_19805196.1| FeS cluster assembly protein sufD [Escherichia coli KTE53]
gi|432592853|ref|ZP_19829172.1| FeS cluster assembly protein sufD [Escherichia coli KTE60]
gi|432607508|ref|ZP_19843697.1| FeS cluster assembly protein sufD [Escherichia coli KTE67]
gi|432611423|ref|ZP_19847586.1| FeS cluster assembly protein sufD [Escherichia coli KTE72]
gi|432646187|ref|ZP_19881977.1| FeS cluster assembly protein sufD [Escherichia coli KTE86]
gi|432651119|ref|ZP_19886876.1| FeS cluster assembly protein sufD [Escherichia coli KTE87]
gi|432655765|ref|ZP_19891471.1| FeS cluster assembly protein sufD [Escherichia coli KTE93]
gi|432699041|ref|ZP_19934199.1| FeS cluster assembly protein sufD [Escherichia coli KTE169]
gi|432745665|ref|ZP_19980334.1| FeS cluster assembly protein sufD [Escherichia coli KTE43]
gi|432783563|ref|ZP_20017744.1| FeS cluster assembly protein sufD [Escherichia coli KTE63]
gi|432844498|ref|ZP_20077397.1| FeS cluster assembly protein sufD [Escherichia coli KTE141]
gi|432904853|ref|ZP_20113759.1| FeS cluster assembly protein sufD [Escherichia coli KTE194]
gi|432937869|ref|ZP_20136246.1| FeS cluster assembly protein sufD [Escherichia coli KTE183]
gi|432971844|ref|ZP_20160712.1| FeS cluster assembly protein sufD [Escherichia coli KTE207]
gi|432978286|ref|ZP_20167108.1| FeS cluster assembly protein sufD [Escherichia coli KTE209]
gi|432985373|ref|ZP_20174097.1| FeS cluster assembly protein sufD [Escherichia coli KTE215]
gi|432995345|ref|ZP_20183956.1| FeS cluster assembly protein sufD [Escherichia coli KTE218]
gi|432999921|ref|ZP_20188451.1| FeS cluster assembly protein sufD [Escherichia coli KTE223]
gi|433038609|ref|ZP_20226213.1| FeS cluster assembly protein sufD [Escherichia coli KTE113]
gi|433058069|ref|ZP_20245128.1| FeS cluster assembly protein sufD [Escherichia coli KTE124]
gi|433082553|ref|ZP_20269018.1| FeS cluster assembly protein sufD [Escherichia coli KTE133]
gi|433087216|ref|ZP_20273600.1| FeS cluster assembly protein sufD [Escherichia coli KTE137]
gi|433101144|ref|ZP_20287241.1| FeS cluster assembly protein sufD [Escherichia coli KTE145]
gi|433115534|ref|ZP_20301338.1| FeS cluster assembly protein sufD [Escherichia coli KTE153]
gi|433125171|ref|ZP_20310746.1| FeS cluster assembly protein sufD [Escherichia coli KTE160]
gi|433139234|ref|ZP_20324505.1| FeS cluster assembly protein sufD [Escherichia coli KTE167]
gi|433144218|ref|ZP_20329370.1| FeS cluster assembly protein sufD [Escherichia coli KTE168]
gi|433149182|ref|ZP_20334218.1| FeS cluster assembly protein sufD [Escherichia coli KTE174]
gi|433188419|ref|ZP_20372522.1| FeS cluster assembly protein sufD [Escherichia coli KTE88]
gi|433207779|ref|ZP_20391462.1| FeS cluster assembly protein sufD [Escherichia coli KTE97]
gi|433212487|ref|ZP_20396090.1| FeS cluster assembly protein sufD [Escherichia coli KTE99]
gi|442604343|ref|ZP_21019188.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli Nissle
1917]
gi|26108334|gb|AAN80536.1|AE016761_111 SufD protein [Escherichia coli CFT073]
gi|227837079|gb|EEJ47545.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 83972]
gi|300297365|gb|EFJ53750.1| FeS assembly protein SufD [Escherichia coli MS 185-1]
gi|300406200|gb|EFJ89738.1| FeS assembly protein SufD [Escherichia coli MS 45-1]
gi|305851714|gb|EFM52167.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli NC101]
gi|307553702|gb|ADN46477.1| FeS assembly protein SufD [Escherichia coli ABU 83972]
gi|315290528|gb|EFU49902.1| FeS assembly protein SufD [Escherichia coli MS 153-1]
gi|320195423|gb|EFW70048.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
WV_060327]
gi|355420271|gb|AER84468.1| cysteine desulfurase activator complex subunit [Escherichia coli
str. 'clone D i2']
gi|355425191|gb|AER89387.1| cysteine desulfurase activator complex subunit [Escherichia coli
str. 'clone D i14']
gi|430907090|gb|ELC28589.1| FeS cluster assembly protein sufD [Escherichia coli KTE16]
gi|430908357|gb|ELC29750.1| FeS cluster assembly protein sufD [Escherichia coli KTE15]
gi|430935126|gb|ELC55448.1| FeS cluster assembly protein sufD [Escherichia coli KTE39]
gi|430953382|gb|ELC72280.1| FeS cluster assembly protein sufD [Escherichia coli KTE187]
gi|430964569|gb|ELC82016.1| FeS cluster assembly protein sufD [Escherichia coli KTE188]
gi|430982593|gb|ELC99282.1| FeS cluster assembly protein sufD [Escherichia coli KTE201]
gi|431024245|gb|ELD37410.1| FeS cluster assembly protein sufD [Escherichia coli KTE214]
gi|431039394|gb|ELD50214.1| FeS cluster assembly protein sufD [Escherichia coli KTE220]
gi|431042519|gb|ELD53007.1| FeS cluster assembly protein sufD [Escherichia coli KTE224]
gi|431052889|gb|ELD62525.1| FeS cluster assembly protein sufD [Escherichia coli KTE230]
gi|431100529|gb|ELE05499.1| FeS cluster assembly protein sufD [Escherichia coli KTE53]
gi|431128638|gb|ELE30820.1| FeS cluster assembly protein sufD [Escherichia coli KTE60]
gi|431138606|gb|ELE40418.1| FeS cluster assembly protein sufD [Escherichia coli KTE67]
gi|431148847|gb|ELE50120.1| FeS cluster assembly protein sufD [Escherichia coli KTE72]
gi|431180224|gb|ELE80111.1| FeS cluster assembly protein sufD [Escherichia coli KTE86]
gi|431190988|gb|ELE90373.1| FeS cluster assembly protein sufD [Escherichia coli KTE87]
gi|431191823|gb|ELE91197.1| FeS cluster assembly protein sufD [Escherichia coli KTE93]
gi|431244290|gb|ELF38598.1| FeS cluster assembly protein sufD [Escherichia coli KTE169]
gi|431291802|gb|ELF82298.1| FeS cluster assembly protein sufD [Escherichia coli KTE43]
gi|431329431|gb|ELG16717.1| FeS cluster assembly protein sufD [Escherichia coli KTE63]
gi|431394825|gb|ELG78338.1| FeS cluster assembly protein sufD [Escherichia coli KTE141]
gi|431433153|gb|ELH14825.1| FeS cluster assembly protein sufD [Escherichia coli KTE194]
gi|431463953|gb|ELH44075.1| FeS cluster assembly protein sufD [Escherichia coli KTE183]
gi|431480458|gb|ELH60177.1| FeS cluster assembly protein sufD [Escherichia coli KTE209]
gi|431482545|gb|ELH62247.1| FeS cluster assembly protein sufD [Escherichia coli KTE207]
gi|431500810|gb|ELH79796.1| FeS cluster assembly protein sufD [Escherichia coli KTE215]
gi|431507058|gb|ELH85344.1| FeS cluster assembly protein sufD [Escherichia coli KTE218]
gi|431509938|gb|ELH88185.1| FeS cluster assembly protein sufD [Escherichia coli KTE223]
gi|431552069|gb|ELI26031.1| FeS cluster assembly protein sufD [Escherichia coli KTE113]
gi|431570712|gb|ELI43620.1| FeS cluster assembly protein sufD [Escherichia coli KTE124]
gi|431602880|gb|ELI72307.1| FeS cluster assembly protein sufD [Escherichia coli KTE133]
gi|431606936|gb|ELI76307.1| FeS cluster assembly protein sufD [Escherichia coli KTE137]
gi|431620274|gb|ELI89151.1| FeS cluster assembly protein sufD [Escherichia coli KTE145]
gi|431635060|gb|ELJ03275.1| FeS cluster assembly protein sufD [Escherichia coli KTE153]
gi|431646556|gb|ELJ14048.1| FeS cluster assembly protein sufD [Escherichia coli KTE160]
gi|431661612|gb|ELJ28424.1| FeS cluster assembly protein sufD [Escherichia coli KTE167]
gi|431662764|gb|ELJ29532.1| FeS cluster assembly protein sufD [Escherichia coli KTE168]
gi|431671846|gb|ELJ38119.1| FeS cluster assembly protein sufD [Escherichia coli KTE174]
gi|431706462|gb|ELJ71032.1| FeS cluster assembly protein sufD [Escherichia coli KTE88]
gi|431730791|gb|ELJ94350.1| FeS cluster assembly protein sufD [Escherichia coli KTE97]
gi|431734769|gb|ELJ98145.1| FeS cluster assembly protein sufD [Escherichia coli KTE99]
gi|441714600|emb|CCQ05165.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli Nissle
1917]
Length = 423
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEIAPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|215486856|ref|YP_002329287.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O127:H6 str. E2348/69]
gi|215264928|emb|CAS09314.1| component of SufBCD complex [Escherichia coli O127:H6 str.
E2348/69]
Length = 423
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|417712656|ref|ZP_12361639.1| feS assembly protein SufD [Shigella flexneri K-272]
gi|417717178|ref|ZP_12366096.1| feS assembly protein SufD [Shigella flexneri K-227]
gi|333005923|gb|EGK25439.1| feS assembly protein SufD [Shigella flexneri K-272]
gi|333018832|gb|EGK38125.1| feS assembly protein SufD [Shigella flexneri K-227]
Length = 423
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 134/317 (42%), Gaps = 60/317 (18%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L +++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVE 304
V G ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSLNGAR-HFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL- 247
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKC 362
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 --LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKT 303
Query: 363 IVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 304 IVSDK-GRAVFNGLINV 319
>gi|417286950|ref|ZP_12074237.1| FeS assembly protein SufD [Escherichia coli TW07793]
gi|386249283|gb|EII95454.1| FeS assembly protein SufD [Escherichia coli TW07793]
Length = 423
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEIAPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|399926345|ref|ZP_10783703.1| FeS assembly protein SufD [Myroides injenensis M09-0166]
Length = 440
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 27/343 (7%)
Query: 56 LEDSLPSSSSSLPQPLP-----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ- 109
L++ L SS + Q L L +R +T + +PS+K+E +++T + + ++
Sbjct: 3 LKEKLISSFVAFEQGLKGEHDCLHNIRLEGLETFENKGFPSKKEEAWKYTSLNSVLKNEF 62
Query: 110 -IQPITRPSSSL-DVS----TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSD 162
+QP + DV +D+ LV I+G + +S L+ + +G V + ++
Sbjct: 63 CVQPKKEVAIEYKDVKKYFLSDSDTFKLVFING-VFSSHLSETTHDNGFDVCLMSAALTK 121
Query: 163 GIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
K V D + D ++N A + I VP V PI + YLS V+
Sbjct: 122 PKYKMVIDNYYNQAADKSDSLTALNTAYAVEGAYINVPKSTVVSKPIEIIYLST----VE 177
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQN 279
+ L + PR +++V E V I+E + ++C + NSV E+ K LQN
Sbjct: 178 DQALLVQ-PRNLIVVGENAHVQILERH--QSISECSIFTNSVTEIFAHKRAICDFYKLQN 234
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
I T ++Q+ S + S GGKL+R+N++ Q G ++ L L+ Q
Sbjct: 235 DLDTGTLIDNTFIKQKQESRVSVHTFSFGGKLTRNNLNFYQDGERIDSTLKGITLIGGKQ 294
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 381
D ++ + + P Q +K + +S+G VF+G + V++
Sbjct: 295 HVDHYTLVSHNQPNCESHQDYKGLYNDNSVG--VFNGKIYVDK 335
>gi|417689575|ref|ZP_12338806.1| feS assembly protein SufD [Shigella boydii 5216-82]
gi|332090821|gb|EGI95913.1| feS assembly protein SufD [Shigella boydii 5216-82]
Length = 423
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 56/346 (16%)
Query: 60 LPSSSSSLPQPLPL---QKLRDSSSQTLLS-----TPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS++L Q L + ++ SS T P+RK E +++T + +SQ
Sbjct: 4 LPNSSNALQQWHHLFEAEGVKRSSQAQQHLQQLLRTGLPTRKHENWKYTPLEGLTNSQFV 63
Query: 112 PIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
I + +L ++ DA LV +DG YV +L ++G
Sbjct: 64 SIAGEISPQQRDALALTLDA--VRLVFVDG---------------RYVPALSDATEGSGY 106
Query: 167 RVSDFISEFQCG-------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
VS I++ + G ++F + A + I V G + P+ L +++ V
Sbjct: 107 EVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHIT---QGV 161
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQ 278
+++ ++ R + + EG E +IE FV ND ++ + + + ++H L
Sbjct: 162 AGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGARFTINVAANAHLQHIKLA 219
Query: 279 NQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 335
+ S + AH TA + + GG + RHN Q G ++ ++S +
Sbjct: 220 FENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTSTQLNGENSMLRINSLAMP 276
Query: 336 VSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G + V
Sbjct: 277 VKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|110641802|ref|YP_669532.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 536]
gi|300987769|ref|ZP_07178347.1| FeS assembly protein SufD [Escherichia coli MS 200-1]
gi|422377264|ref|ZP_16457507.1| FeS assembly protein SufD [Escherichia coli MS 60-1]
gi|432470983|ref|ZP_19713030.1| FeS cluster assembly protein sufD [Escherichia coli KTE206]
gi|432713394|ref|ZP_19948435.1| FeS cluster assembly protein sufD [Escherichia coli KTE8]
gi|433077764|ref|ZP_20264315.1| FeS cluster assembly protein sufD [Escherichia coli KTE131]
gi|110343394|gb|ABG69631.1| SufD protein [Escherichia coli 536]
gi|300306057|gb|EFJ60577.1| FeS assembly protein SufD [Escherichia coli MS 200-1]
gi|324011454|gb|EGB80673.1| FeS assembly protein SufD [Escherichia coli MS 60-1]
gi|430998201|gb|ELD14442.1| FeS cluster assembly protein sufD [Escherichia coli KTE206]
gi|431257197|gb|ELF50121.1| FeS cluster assembly protein sufD [Escherichia coli KTE8]
gi|431597435|gb|ELI67341.1| FeS cluster assembly protein sufD [Escherichia coli KTE131]
Length = 423
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|416828585|ref|ZP_11898073.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. LSU-61]
gi|320668705|gb|EFX35510.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. LSU-61]
Length = 423
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
+ S +S LPD + L +++ + +RV+
Sbjct: 97 LSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQRVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L +++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLELAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFSINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|300774695|ref|ZP_07084558.1| FeS assembly protein SufD [Chryseobacterium gleum ATCC 35910]
gi|300506510|gb|EFK37645.1| FeS assembly protein SufD [Chryseobacterium gleum ATCC 35910]
Length = 444
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 145/342 (42%), Gaps = 18/342 (5%)
Query: 49 VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--K 106
V+ L E + ++ SL L R ++ Q + +P++KDE +++T+ I K
Sbjct: 9 VMALKEQIIENHNEFLESLRHRF-LDDERKTALQRFNNIGFPTKKDEEYKYTNLKEITEK 67
Query: 107 SSQIQP-----ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
S P IT+ + F +V ++G + +S + + ++ ++
Sbjct: 68 SYNFFPKENHNITKEQFDELHLGEENFDWIVFVNGKLHKELSKVS-IENVEFLSFNYALN 126
Query: 162 DGIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
D K V + F + F ++N + VP +E PI++ Y+S
Sbjct: 127 DEKHKEVFEKYFNTIASKEQAFTNLNLAYCKYGFFLKVPKNVVIEKPIHVFYISQ----- 181
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ ++ N R +++VEEG +V +IE + + NSV E+ K LQN
Sbjct: 182 NQEENTFYNTRNLLIVEEGAKVEVIESHHNFDSS-YVLTNSVTEIFTYPNAKADWHKLQN 240
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+ I T +QE S + S GGKL R+N+ G + + ++ ++ DQ
Sbjct: 241 DNNTTYLIDNTFAKQEKDSLTTVNTFSFGGKLVRNNLDFIHNGSNINSFMNGITIIGKDQ 300
Query: 340 TQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D H+ + + P Q +K I + VF+G V V++
Sbjct: 301 LVDHHTAVHHNFPNCESYQNYKGIFDGN-AHGVFNGKVFVDK 341
>gi|194434787|ref|ZP_03067037.1| FeS assembly protein SufD [Shigella dysenteriae 1012]
gi|416281763|ref|ZP_11646071.1| Iron-sulfur cluster assembly protein SufD [Shigella boydii ATCC
9905]
gi|417672218|ref|ZP_12321691.1| feS assembly protein SufD [Shigella dysenteriae 155-74]
gi|420347333|ref|ZP_14848733.1| feS assembly protein SufD [Shigella boydii 965-58]
gi|194416956|gb|EDX33075.1| FeS assembly protein SufD [Shigella dysenteriae 1012]
gi|320181293|gb|EFW56212.1| Iron-sulfur cluster assembly protein SufD [Shigella boydii ATCC
9905]
gi|332093953|gb|EGI99006.1| feS assembly protein SufD [Shigella dysenteriae 155-74]
gi|391271282|gb|EIQ30157.1| feS assembly protein SufD [Shigella boydii 965-58]
Length = 423
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 56/346 (16%)
Query: 60 LPSSSSSLPQPLPL---QKLRDSSSQTLLS-----TPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS++L Q L + ++ SS T P+RK E +++T + +SQ
Sbjct: 4 LPNSSNALQQWHHLFEAEGVKRSSQAQQHLQQLLRTGLPTRKHENWKYTPLEGLTNSQFV 63
Query: 112 PIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
I + +L ++ DA LV +DG YV +L ++G
Sbjct: 64 SIAGEISPQQRDALALTLDA--VRLVFVDG---------------RYVPALSDATEGSGY 106
Query: 167 RVSDFISEFQCG-------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
VS I++ + G ++F + A + I V G + P+ L +++ V
Sbjct: 107 EVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHIT---QGV 161
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQ 278
+++ ++ R + + EG E +IE FV ND ++ + + + ++H L
Sbjct: 162 AGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGARFTINVAANAHLQHIKLA 219
Query: 279 NQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 335
+ S + AH TA + + GG + RHN Q G ++ ++S +
Sbjct: 220 FENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTSTQLNGENSMLRINSLAMP 276
Query: 336 VSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G + V
Sbjct: 277 VKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|74311994|ref|YP_310413.1| cysteine desulfurase [Shigella sonnei Ss046]
gi|383178260|ref|YP_005456265.1| cysteine desulfurase activator complex subunit SufD [Shigella
sonnei 53G]
gi|414575836|ref|ZP_11433035.1| feS assembly protein SufD [Shigella sonnei 3233-85]
gi|418264931|ref|ZP_12885158.1| feS assembly protein SufD [Shigella sonnei str. Moseley]
gi|420358367|ref|ZP_14859359.1| feS assembly protein SufD [Shigella sonnei 3226-85]
gi|420363138|ref|ZP_14864040.1| feS assembly protein SufD [Shigella sonnei 4822-66]
gi|73855471|gb|AAZ88178.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|391285183|gb|EIQ43769.1| feS assembly protein SufD [Shigella sonnei 3226-85]
gi|391286547|gb|EIQ45086.1| feS assembly protein SufD [Shigella sonnei 3233-85]
gi|391295255|gb|EIQ53424.1| feS assembly protein SufD [Shigella sonnei 4822-66]
gi|397901537|gb|EJL17881.1| feS assembly protein SufD [Shigella sonnei str. Moseley]
Length = 423
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L +++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|417342133|ref|ZP_12123019.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|357957017|gb|EHJ82215.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 423
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|146298940|ref|YP_001193531.1| FeS assembly protein SufD [Flavobacterium johnsoniae UW101]
gi|146153358|gb|ABQ04212.1| FeS assembly protein SufD [Flavobacterium johnsoniae UW101]
Length = 438
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 147/344 (42%), Gaps = 23/344 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + + L +R ++ + + +P++K+E +++T + I +
Sbjct: 1 MDLKEKLVSSFMAFEERVDVHSDLHDIRTNALKNFENKGFPTKKEEAWKYTSLNAILKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ ++++ + ++ LV IDG + +S L+ S DG+ V + ++
Sbjct: 61 FTVFPKQENAIEFNQVKKYFLHEIDTYKLVFIDG-VFSSHLS-STTHDGIDVCLMSSALT 118
Query: 162 DGIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K V D F D S+N A + I +P + PI + Y S GN
Sbjct: 119 KPKYKMVIDTYFNQIASKDDSLTSLNTAFAIEGAFINIPKKKVADKPIEIMYFST--GN- 175
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + PR +V+V E V IIE N NSV E+ K V + +QN
Sbjct: 176 --EAALMVQPRNLVIVGENSHVQIIERHQSLNENPV-LTNSVTEIFAQKRAIVDYYKIQN 232
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+ A I T V Q+ S + S GG L+R+N++ G + L+ +L Q
Sbjct: 233 DNNEANLIDNTYVSQQQESHASVHTFSFGGNLTRNNLNFYHYGERLTSTLNGISILNDKQ 292
Query: 340 TQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ L++H + C Q +K I + VF+G V V +
Sbjct: 293 HVDHYT--LVNHAQPNCESFQDYKGIFS-DRSTGVFNGKVLVEK 333
>gi|395802762|ref|ZP_10482014.1| FeS assembly protein SufD [Flavobacterium sp. F52]
gi|395435203|gb|EJG01145.1| FeS assembly protein SufD [Flavobacterium sp. F52]
Length = 438
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 146/344 (42%), Gaps = 23/344 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + + L +R ++ + + +P++K+E +++T + I +
Sbjct: 1 MDLKEKLVSSFMAFEERVDVHSDLHDIRTNALKNFENKGFPTKKEEAWKYTSLNAILKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ ++++ + ++ LV IDG + +S L+ S DG+ V + ++
Sbjct: 61 FTVFPKQENAIEFNQVKKYFLHEIDTYKLVFIDG-VFSSHLS-STTHDGIDVCLMSSALT 118
Query: 162 DGIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K V D F D S+N A + I +P + PI + Y S GN
Sbjct: 119 KPKYKMVIDTYFNQIASKDDSLTSLNTAFAIEGAFINIPKKKVADKPIEIMYFST--GN- 175
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + PR +V+V E V IIE N NSV E+ K V + +QN
Sbjct: 176 --EAALMVQPRNLVIVGENSHVQIIERHQSLNENPV-LTNSVTEIFAQKRAIVDYYKIQN 232
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
+ A I T V Q+ S + S GG L+R+N++ G + L+ +L Q
Sbjct: 233 DNNEANLIDNTYVSQQQESHASVHTFSFGGNLTRNNLNFYHFGERLTSTLNGISILNDKQ 292
Query: 340 TQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ L++H C Q +K I + VF+G V V +
Sbjct: 293 HVDHYT--LVNHATPNCESFQDYKGIFSDR-STGVFNGKVLVEK 333
>gi|149376034|ref|ZP_01893800.1| FeS assembly protein SufD [Marinobacter algicola DG893]
gi|149359671|gb|EDM48129.1| FeS assembly protein SufD [Marinobacter algicola DG893]
Length = 428
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 137/318 (43%), Gaps = 21/318 (6%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD-VSTDAQF 128
P PL +LR L+ P P+RK E ++++ + + ++ T P++ D S
Sbjct: 20 PEPLLELRKQRGTALVDMPLPTRKTENWKYSSRHLKLTDEL-ATTLPATGKDGYSLSIPG 78
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK----RVSDFISEFQCGDLFWSI 184
+V +G + A + +L DG+ + + D R+ + + +
Sbjct: 79 YRVVFHNGVMIPEASDFPDL-DGIRIQRFADLDDDEAAALAERLDNTLDTRAVQ--MARL 135
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N D I + ++ P+++ + V G S + PR+ V ++ ++
Sbjct: 136 NSARFEDGLYIQLDKEAVLDQPLFIVH-EVTGTASGS-----AYPRIYVDAARHSQITVV 189
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
EE++ G + ++V E V+ G +V + L + N HI T VRQ S +E
Sbjct: 190 EEYLSS-GEEPVMVDTVTEFVLADGAQVTNVRLVMEGENVQHIGATGVRQAANSRFESHC 248
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKC 362
V GG L RH++ V+ G E +L+ + Q D H+ ++H +C + ++
Sbjct: 249 VGFGGPLRRHDLQVRLEGEGGECKLNGVVVTQGKQHYDNHTS--IEHVAAHCDSEETYRN 306
Query: 363 IVAHSLGQAVFDGNVKVN 380
I A AVF+G + ++
Sbjct: 307 IAADE-SHAVFNGRIHIH 323
>gi|357421235|ref|YP_004928684.1| SufBCD Fe-S assembly scaffold, FADH2-dependent [Blattabacterium sp.
(Mastotermes darwiniensis) str. MADAR]
gi|354803745|gb|AER40859.1| SufBCD Fe-S assembly scaffold, FADH2-dependent [Blattabacterium sp.
(Mastotermes darwiniensis) str. MADAR]
Length = 430
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 26/321 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
+ +LR+ S +PS KDE ++ TD I + + + L+ + LV
Sbjct: 23 ISELRNKSIDIFKRNGFPSIKDEEWKNTDIQSIINQDYNIYLQKKNDLEYKNIKKIQELV 82
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM---------KRVSDFISEFQCG-DLFW 182
+ ++S L + DG Y L S+ I+ +++ +F + + F
Sbjct: 83 YLKK--EDSFLII--FVDGKYNAFLSHTSNNIVLSNIASQKEEKIKNFYGKLSYRYEPFN 138
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
++N + + D IY+P ++ PI + L + G ++ K + N R +++V E V
Sbjct: 139 TLNTVFSNDGVYIYIPNNVFLKKPIEI--LHIYTG-IEPKIML--NTRNLIIVGESSRVK 193
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
IIE N V E+ K+ + +Q+Q L + I T ++Q+ S +
Sbjct: 194 IIEHHKSLLEEQLLLNNVVSEIYALSNSKIEYYKIQDQEL--SMIDNTFLKQDLHSKCSV 251
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLH 360
S GK R+N++ G T + L LL Q D H+ L+DH + QL+
Sbjct: 252 YTFSFKGKFIRNNLNFYSRGEKTSSSLYGISLLSGKQLVDNHT--LIDHLYSNSHSFQLY 309
Query: 361 KCIVAHSLGQAVFDGNVKVNR 381
K I+ S +++F+G V V +
Sbjct: 310 KNILWGS-SKSIFNGKVLVKK 329
>gi|338737940|ref|YP_004674902.1| FeS assembly protein SufD [Hyphomicrobium sp. MC1]
gi|337758503|emb|CCB64328.1| FeS assembly protein SufD [Hyphomicrobium sp. MC1]
Length = 445
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 149/346 (43%), Gaps = 37/346 (10%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
+++ +S +++ LP +++ R + P R+ E +++TD I P
Sbjct: 12 QAISESFEAAAGKLPGTDVVRERRAQAIGAFSGLGLPHRRIEEWKYTDLRA-NVKDIFP- 69
Query: 114 TRPSSSLDVSTDAQFPSLVLIDG-----------FIQ-NSALNLSNLPD--GVYVGSLLG 159
++LD +T L++ G F+ + LS+ D G V +L
Sbjct: 70 ----AALDDATPLTIAELIVALGPLAHVDAHRIVFVNGHHRAGLSDFADAAGFEVAALGE 125
Query: 160 VSDGIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ + VS +S + GD ++N D V+ V G V P+ + ++
Sbjct: 126 LLATATEDVSAALVSTPEGGDAIETLNTAFMTDGAVVRVTEGASVAKPLLIVFVRA---G 182
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFV---GKEGNDCYWANSVLEVVIGKGGKVRHS 275
++ + + N V VE G +IE V G E + N++ +VV+GKG + H+
Sbjct: 183 AEASSVAVRN---FVTVEAGASASVIEAHVVLPGAEQD--VQLNALTDVVVGKGATLHHA 237
Query: 276 YLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLL 335
+ A H+ V + + Y + S G L+R+ ++V G + +LS +L
Sbjct: 238 KVAVDEGKALHLSNCDVTLDADATYRSFQFSAGLGLARNGLNVIFEGEGGKIDLSGAYL- 296
Query: 336 VSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ + + + + L++DH PR R+L K ++ G+ VF G + V
Sbjct: 297 -ARRAEHIDTTLVVDHAVPRCESRELFKGVL-EDHGRGVFQGKIIV 340
>gi|422781464|ref|ZP_16834249.1| FeS assembly protein SufD [Escherichia coli TW10509]
gi|323978182|gb|EGB73268.1| FeS assembly protein SufD [Escherichia coli TW10509]
Length = 423
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHEHWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|357031718|ref|ZP_09093661.1| ABC transporter permease protein [Gluconobacter morbifer G707]
gi|356414948|gb|EHH68592.1| ABC transporter permease protein [Gluconobacter morbifer G707]
Length = 387
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 252 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
G Y AN L++ +G G ++RH LQ +S +A H+ +V Y+ ++ GG L
Sbjct: 164 GEGSYVANPRLDISVGAGARLRHVKLQRESTDATHLAILSVDVAEKGEYDSFVLNQGGLL 223
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 371
+RH V GP ++ + ++ DL S + P RQ K +++ + GQ
Sbjct: 224 ARHEVGATLEGPHAFVHVNGVQTVDGNRLNDLTSMIHHAAPDCGSRQTVKTVLSDA-GQG 282
Query: 372 VFDGNVKVNR 381
VF G + V+R
Sbjct: 283 VFQGKILVDR 292
>gi|300918051|ref|ZP_07134672.1| FeS assembly protein SufD [Escherichia coli MS 115-1]
gi|300414742|gb|EFJ98052.1| FeS assembly protein SufD [Escherichia coli MS 115-1]
Length = 423
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGV 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|218660816|ref|ZP_03516746.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli IE4771]
Length = 330
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 132/324 (40%), Gaps = 40/324 (12%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTD 125
LP + LRD L P+R+ E + +TD S++++ P + D +D
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDFKSLLRA-------LPPQAGDAGSD 79
Query: 126 AQFP------SLVLIDGFIQN----SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
P L +I G AL +S + + GS + G+ SD
Sbjct: 80 PLEPLVAGSRVLAVIQGHANQKAAAEALGVSAFSESLRDGS---AAVGLDALGSD----- 131
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
D ING D V+ VP ++ENP+ +++ + G +LP+S V
Sbjct: 132 ---DAVGRINGSFVRDGYVVDVPDDTELENPLEIQF--IHAGGQTHTRLPVSFGANV--- 183
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
+ +IE G D + + + ++ IGKG ++ LQ Q + H+ V
Sbjct: 184 ----KATVIERHRAVTG-DAAFVSHISDITIGKGTELTWIILQQQGADDTHLGQIRVDLG 238
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
+ L ++ GGKL R +H++ G + L +LL +D D+ L D P
Sbjct: 239 ADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTG 298
Query: 356 CRQLHKCIVAHSLGQAVFDGNVKV 379
++ + +V + VF G ++V
Sbjct: 299 STEVIRNVV-FDRAKGVFQGMIRV 321
>gi|432543134|ref|ZP_19779985.1| FeS cluster assembly protein sufD [Escherichia coli KTE236]
gi|432548616|ref|ZP_19785397.1| FeS cluster assembly protein sufD [Escherichia coli KTE237]
gi|432621882|ref|ZP_19857916.1| FeS cluster assembly protein sufD [Escherichia coli KTE76]
gi|431075889|gb|ELD83409.1| FeS cluster assembly protein sufD [Escherichia coli KTE236]
gi|431081845|gb|ELD88172.1| FeS cluster assembly protein sufD [Escherichia coli KTE237]
gi|431159581|gb|ELE60125.1| FeS cluster assembly protein sufD [Escherichia coli KTE76]
Length = 423
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L +++DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTSDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAHSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPVKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|421812346|ref|ZP_16248094.1| feS assembly protein SufD [Escherichia coli 8.0416]
gi|408602432|gb|EKK76147.1| feS assembly protein SufD [Escherichia coli 8.0416]
Length = 423
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLELAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFSINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|209549491|ref|YP_002281408.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535247|gb|ACI55182.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 424
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 30/319 (9%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
LP + LRD L P+R+ E + +TD + T P D +DA
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TLPPQVGDAGSDA 80
Query: 127 QFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFISEFQCGDL 180
P L+DG IQ A + DG+ V + S+ ++ +D + D
Sbjct: 81 LEP---LVDGSTVLAVIQGHA-SQKAAADGLGVSAY---SEHLLDGSAADGLDALGSDDA 133
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
ING D V+ VPA +++ P+ +++ V G +LP++ G +
Sbjct: 134 VGRINGSFVRDGYVVDVPADTELDAPLEIQF--VHAGGQTHTRLPVA-------FASGVK 184
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
+IE + G D + V ++ +G+G ++ LQ + H+ + +
Sbjct: 185 ATVIERHLAVTG-DPALVSHVSDITVGEGAELTWIILQQHGVEDTHLGQIRIDLGADAKL 243
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L ++ GGKL R +H++ G + L +LL +D D+ L D P ++
Sbjct: 244 RLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVI 303
Query: 361 KCIVAHSLGQAVFDGNVKV 379
+ +V + VF G ++V
Sbjct: 304 RNVV-FDRAKGVFQGMIRV 321
>gi|424792339|ref|ZP_18218577.1| ABC transporter-like protein involved in Fe-S cluster assembly
[Xanthomonas translucens pv. graminis ART-Xtg29]
gi|422797110|gb|EKU25497.1| ABC transporter-like protein involved in Fe-S cluster assembly
[Xanthomonas translucens pv. graminis ART-Xtg29]
Length = 420
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 140/300 (46%), Gaps = 20/300 (6%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSN 147
P + E +++T ++ P + ++D + P+ LV ++G ++ +L+
Sbjct: 31 PGPRSEAWKYTSLRALERRSFSPAPSAAPAVDAAIVDGIPAPRLVFVNGRGSDTLSDLAG 90
Query: 148 LPDGV---YVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKV 203
LP GV + ++L D M+ + F+ D +F +N A + V+ V G +V
Sbjct: 91 LPAGVEWQRLSTILRSGDDAMRFLG---RRFERSDEVFAQLNAALADEGSVLRVDTGVQV 147
Query: 204 ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLE 263
P++L ++S G + + R ++ + + + ++E + G + +N++
Sbjct: 148 AVPLHLVFVSTSGAGDHAW-----HHRHLIELRQDAALSLVEHHL-HLGEAAHLSNTLAH 201
Query: 264 VVIGKGGKVRHSYLQ-NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
V + G ++ H+ +Q + S A ++ AV A Y +++ GG LSRH ++V+ G
Sbjct: 202 VHLAAGAQLTHARVQADASAVTALLRTDAVLARHAQ-YRRIDLELGGALSRHELNVRLEG 260
Query: 323 PDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ L + +L+ + + + +RL ++H R +L VA + + VF G + + +
Sbjct: 261 DN--ARLVANGVLLGNGRRQIDTRLGIEHIARDTACELLWRGVAAARSRVVFHGGIHIRQ 318
>gi|432369801|ref|ZP_19612890.1| FeS cluster assembly protein sufD [Escherichia coli KTE10]
gi|430885428|gb|ELC08299.1| FeS cluster assembly protein sufD [Escherichia coli KTE10]
Length = 423
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGVEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|432449689|ref|ZP_19691961.1| FeS cluster assembly protein sufD [Escherichia coli KTE193]
gi|433033414|ref|ZP_20221146.1| FeS cluster assembly protein sufD [Escherichia coli KTE112]
gi|430981265|gb|ELC97993.1| FeS cluster assembly protein sufD [Escherichia coli KTE193]
gi|431553404|gb|ELI27330.1| FeS cluster assembly protein sufD [Escherichia coli KTE112]
Length = 423
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLELAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|417349391|ref|ZP_12128080.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|417391373|ref|ZP_12154574.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353573042|gb|EHC36503.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353615750|gb|EHC67193.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
Length = 423
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTAQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|419142312|ref|ZP_13687059.1| feS assembly protein SufD [Escherichia coli DEC6A]
gi|419148283|ref|ZP_13692960.1| feS assembly protein SufD [Escherichia coli DEC6B]
gi|422817038|ref|ZP_16865252.1| FeS cluster assembly protein sufD [Escherichia coli M919]
gi|377995799|gb|EHV58911.1| feS assembly protein SufD [Escherichia coli DEC6B]
gi|377996621|gb|EHV59729.1| feS assembly protein SufD [Escherichia coli DEC6A]
gi|385539709|gb|EIF86541.1| FeS cluster assembly protein sufD [Escherichia coli M919]
Length = 423
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 52/313 (16%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQ-------IQPITRPSSSLDVSTDAQFPSLVLIDGFIQ 139
T P+RK E +++T + +SQ I P R + +L + + LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDS----VRLVFVDG--- 91
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDL 192
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ------------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSV 137
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
I V G + P+ L +++ + V +++ ++ R + + EG E +IE FV
Sbjct: 138 THIAVKRGQRPAKPLLLMHITQD---VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL-- 192
Query: 253 NDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTG 308
ND ++ + + + ++H L + S + AH TA + + G
Sbjct: 193 NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LG 249
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
G + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 250 GAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSD 307
Query: 367 SLGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 308 K-GRAVFNGLINV 319
>gi|261343986|ref|ZP_05971631.1| FeS assembly protein SufD [Providencia rustigianii DSM 4541]
gi|282568377|gb|EFB73912.1| FeS assembly protein SufD [Providencia rustigianii DSM 4541]
Length = 435
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 90 PSRKDEPFRFTDTSMIKSSQI-----QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN 144
P + E + +T + +Q + + +P++ + + DA + L+DG
Sbjct: 56 PKFRHEDWHYTPLETVLRTQYHFSDPESVLKPNADIALEIDAY--RITLVDGRYN---AE 110
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE 204
LS++ G + +LL D + V+ ++F + AP +I + A
Sbjct: 111 LSSIDMGEFQVTLLDSQDVLPDAVN--------SEIFLHLTECLAPQPLLINLAANKVAS 162
Query: 205 NPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEV 264
P+YL L++ G+V+S+ +S R + + + +IE FV + N + L V
Sbjct: 163 KPLYL--LNISSGSVNSQGTNMSQYRYHLTLGNNSQSEVIEHFVSLD-NQPHLTGGRLTV 219
Query: 265 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPD 324
IG ++ H L ++ +A H + S + G L RH+ + G +
Sbjct: 220 EIGDNAQLSHFKLVTENPSAQHFAHNDMIVGRDSQVKSSSFLLGAGLLRHHTSSRLEGEN 279
Query: 325 TETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
T+ EL+S L++ T+ +R L+H YC RQLHK I S + VF+G +KV
Sbjct: 280 TQFELNS--LVLPQGTEIADTRSYLEHNACYCSSRQLHKVIGMDS-SKTVFNGMIKV 333
>gi|420275430|ref|ZP_14777731.1| feS assembly protein SufD [Escherichia coli PA40]
gi|424115599|ref|ZP_17849530.1| feS assembly protein SufD [Escherichia coli PA3]
gi|424313361|ref|ZP_17895654.1| feS assembly protein SufD [Escherichia coli PA28]
gi|424513985|ref|ZP_17958770.1| feS assembly protein SufD [Escherichia coli TW14313]
gi|424532350|ref|ZP_17975756.1| feS assembly protein SufD [Escherichia coli EC4422]
gi|424538355|ref|ZP_17981373.1| feS assembly protein SufD [Escherichia coli EC4013]
gi|444924884|ref|ZP_21244291.1| feS assembly protein SufD [Escherichia coli 09BKT078844]
gi|390681368|gb|EIN57161.1| feS assembly protein SufD [Escherichia coli PA3]
gi|390729570|gb|EIO01730.1| feS assembly protein SufD [Escherichia coli PA28]
gi|390759211|gb|EIO28609.1| feS assembly protein SufD [Escherichia coli PA40]
gi|390851021|gb|EIP14354.1| feS assembly protein SufD [Escherichia coli TW14313]
gi|390863898|gb|EIP26027.1| feS assembly protein SufD [Escherichia coli EC4422]
gi|390868231|gb|EIP29989.1| feS assembly protein SufD [Escherichia coli EC4013]
gi|444542967|gb|ELV22292.1| feS assembly protein SufD [Escherichia coli 09BKT078844]
Length = 407
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 23 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 75
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 76 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 123
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 124 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLELAEGAEATVIEHFVSL--ND 178
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 179 ARHFTGARFSINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 235
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 236 VLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 292
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 293 GRAVFNGLINV 303
>gi|259908555|ref|YP_002648911.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
pyrifoliae Ep1/96]
gi|224964177|emb|CAX55684.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
pyrifoliae Ep1/96]
Length = 399
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 140/311 (45%), Gaps = 32/311 (10%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSS---LDVSTDAQFPSLVLID 135
Q LL P+RK E +++T + ++Q +P + + L + DA LV ID
Sbjct: 8 QQLLRAGLPTRKQEDWKYTPLDQLLNNQFVLPEPAALDAEAIKALALPIDA--VRLVFID 65
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G + LS+ ++ ++ ++ +R ++E ++F + A + +I
Sbjct: 66 GRF---SPELSDSEHDLFTIQMVQAAE---RRE---LNEPVHPEVFLHLTESLAEQVTLI 116
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+ G P+YL ++S + +L S+ R + ++E E +IE +V + +
Sbjct: 117 QLARGKAAARPLYLLHIS---SGSSTGELNTSHYRHHLQLDEAAEATVIEHYVSLDA-EP 172
Query: 256 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + +G + H ++ +S + +H T R + + G L+
Sbjct: 173 HFTGARFTAEVGNNAALTHYNLAFEDCRSYHFSHNDLTLGRDTRVQSHSFL---LGAGLT 229
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RH+ + G ++ ++S L + + D SR L+H +GYC RQLHK IV +
Sbjct: 230 RHHTSTRLNGEGSDLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV-RDRAR 286
Query: 371 AVFDGNVKVNR 381
AVF+G +KV R
Sbjct: 287 AVFNGIIKVAR 297
>gi|432947556|ref|ZP_20142712.1| FeS cluster assembly protein sufD [Escherichia coli KTE196]
gi|433043279|ref|ZP_20230780.1| FeS cluster assembly protein sufD [Escherichia coli KTE117]
gi|431457534|gb|ELH37871.1| FeS cluster assembly protein sufD [Escherichia coli KTE196]
gi|431556610|gb|ELI30385.1| FeS cluster assembly protein sufD [Escherichia coli KTE117]
Length = 423
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L +++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|402487875|ref|ZP_10834690.1| FeS assembly protein SufD [Rhizobium sp. CCGE 510]
gi|401813043|gb|EJT05390.1| FeS assembly protein SufD [Rhizobium sp. CCGE 510]
Length = 424
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 136/330 (41%), Gaps = 28/330 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ + LP + LRD L P+R+ E + +TD + +
Sbjct: 15 ALIEAFNNQIGDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLRA------ 68
Query: 115 RPSSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVS 169
P D +DA P S VL IQ A N DG+ V + S+ ++ +
Sbjct: 69 LPPQVGDAGSDALEPLAGGSTVL--AVIQGHA-NQKAAADGLGVSAY---SEHLLDGSAA 122
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
D + D ING D V+ VPA +E P+ ++++ GG V ++ LP++
Sbjct: 123 DGLDALDSDDAVGRINGSFVRDGYVVDVPADTALEGPLEIQFVHA-GGQVHTR-LPVA-- 178
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
G + +IE + G D + V ++ +G+G ++ LQ Q H+
Sbjct: 179 -----FGAGVKATVIERHLTVTG-DAALVSHVSDITVGEGAELTWIILQQQGAEDTHLGQ 232
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
+ + L ++ GGKL R +H++ G + L +LL + D+ L
Sbjct: 233 IRIDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGGESHTDVTMVLGH 292
Query: 350 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
D P ++ + +V + VF G ++V
Sbjct: 293 DVPHTGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|386619250|ref|YP_006138830.1| Cysteine desulfurase activator complex subunit [Escherichia coli
NA114]
gi|432397482|ref|ZP_19640263.1| FeS cluster assembly protein sufD [Escherichia coli KTE25]
gi|432421946|ref|ZP_19664494.1| FeS cluster assembly protein sufD [Escherichia coli KTE178]
gi|432558768|ref|ZP_19795446.1| FeS cluster assembly protein sufD [Escherichia coli KTE49]
gi|432710594|ref|ZP_19945656.1| FeS cluster assembly protein sufD [Escherichia coli KTE6]
gi|432723106|ref|ZP_19958026.1| FeS cluster assembly protein sufD [Escherichia coli KTE17]
gi|432727693|ref|ZP_19962572.1| FeS cluster assembly protein sufD [Escherichia coli KTE18]
gi|432741384|ref|ZP_19976103.1| FeS cluster assembly protein sufD [Escherichia coli KTE23]
gi|432894505|ref|ZP_20106326.1| FeS cluster assembly protein sufD [Escherichia coli KTE165]
gi|432990693|ref|ZP_20179357.1| FeS cluster assembly protein sufD [Escherichia coli KTE217]
gi|433110904|ref|ZP_20296769.1| FeS cluster assembly protein sufD [Escherichia coli KTE150]
gi|333969751|gb|AEG36556.1| Cysteine desulfurase activator complex subunit [Escherichia coli
NA114]
gi|430915586|gb|ELC36664.1| FeS cluster assembly protein sufD [Escherichia coli KTE25]
gi|430944705|gb|ELC64794.1| FeS cluster assembly protein sufD [Escherichia coli KTE178]
gi|431091819|gb|ELD97527.1| FeS cluster assembly protein sufD [Escherichia coli KTE49]
gi|431249386|gb|ELF43541.1| FeS cluster assembly protein sufD [Escherichia coli KTE6]
gi|431265660|gb|ELF57222.1| FeS cluster assembly protein sufD [Escherichia coli KTE17]
gi|431273382|gb|ELF64456.1| FeS cluster assembly protein sufD [Escherichia coli KTE18]
gi|431283075|gb|ELF73934.1| FeS cluster assembly protein sufD [Escherichia coli KTE23]
gi|431422418|gb|ELH04610.1| FeS cluster assembly protein sufD [Escherichia coli KTE165]
gi|431494775|gb|ELH74361.1| FeS cluster assembly protein sufD [Escherichia coli KTE217]
gi|431628208|gb|ELI96584.1| FeS cluster assembly protein sufD [Escherichia coli KTE150]
Length = 423
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 56/315 (17%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFI---QNSAL 143
T P+RK E +++T LD T++QF V I G I Q AL
Sbjct: 39 TGLPTRKHENWKYT------------------PLDGLTNSQF---VCIAGEISPQQRDAL 77
Query: 144 NLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAP 190
L+ DG YV +L ++G VS I++ + G ++F + A
Sbjct: 78 ALTLDAVRLVFVDGRYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQ 135
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ I V G + P+ L +++ V +++ ++ R + + EG E +IE FV
Sbjct: 136 SVTHIAVKRGQRPTKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL 192
Query: 251 EGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVS 306
ND ++ + + + ++H L + S + AH TA + +
Sbjct: 193 --NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL--- 247
Query: 307 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 364
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV
Sbjct: 248 LGGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIV 305
Query: 365 AHSLGQAVFDGNVKV 379
+ G+AVF+G + V
Sbjct: 306 SDK-GRAVFNGLINV 319
>gi|419913891|ref|ZP_14432300.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KD1]
gi|388387919|gb|EIL49517.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KD1]
Length = 423
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|432406697|ref|ZP_19649406.1| FeS cluster assembly protein sufD [Escherichia coli KTE28]
gi|430929456|gb|ELC49965.1| FeS cluster assembly protein sufD [Escherichia coli KTE28]
Length = 423
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 56/315 (17%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFI---QNSAL 143
T P+RK E +++T LD T++QF V I G I Q AL
Sbjct: 39 TGLPTRKHENWKYT------------------PLDGLTNSQF---VCIAGEISPQQRDAL 77
Query: 144 NLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAP 190
L+ DG YV +L ++G VS I++ + G ++F + A
Sbjct: 78 ALTLDAVRLVFVDGRYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQ 135
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ I V G + P+ L +++ V +++ ++ R + + EG E +IE FV
Sbjct: 136 SVTHIAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL 192
Query: 251 EGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVS 306
ND ++ + + + ++H L + S + AH TA + +
Sbjct: 193 --NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL--- 247
Query: 307 TGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV 364
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV
Sbjct: 248 LGGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIV 305
Query: 365 AHSLGQAVFDGNVKV 379
+ G+AVF+G + V
Sbjct: 306 SDK-GRAVFNGLINV 319
>gi|386614231|ref|YP_006133897.1| feS assembly protein SufD [Escherichia coli UMNK88]
gi|332343400|gb|AEE56734.1| feS assembly protein SufD [Escherichia coli UMNK88]
Length = 423
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 52/313 (16%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQ-------IQPITRPSSSLDVSTDAQFPSLVLIDGFIQ 139
T P+RK E +++T + +SQ I P R + +L + + LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDS----VRLVFVDG--- 91
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDL 192
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ------------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSV 137
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV
Sbjct: 138 THIAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL-- 192
Query: 253 NDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTG 308
ND ++ + + + ++H L + S + AH TA + + G
Sbjct: 193 NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LG 249
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
G + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 250 GAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSD 307
Query: 367 SLGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 308 K-GRAVFNGLINV 319
>gi|293446055|ref|ZP_06662477.1| FeS assembly protein SufD [Escherichia coli B088]
gi|291322885|gb|EFE62313.1| FeS assembly protein SufD [Escherichia coli B088]
Length = 423
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 141/304 (46%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + +++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAQLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQL+K IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLYKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|425300453|ref|ZP_18690397.1| feS assembly protein SufD [Escherichia coli 07798]
gi|408216600|gb|EKI40914.1| feS assembly protein SufD [Escherichia coli 07798]
Length = 423
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGDISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|91210894|ref|YP_540880.1| cysteine desulfurase [Escherichia coli UTI89]
gi|117623860|ref|YP_852773.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli APEC O1]
gi|218558550|ref|YP_002391463.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli S88]
gi|218689623|ref|YP_002397835.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli ED1a]
gi|237705627|ref|ZP_04536108.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 3_2_53FAA]
gi|331683188|ref|ZP_08383789.1| FeS assembly protein SufD [Escherichia coli H299]
gi|386599480|ref|YP_006100986.1| FeS assembly protein SufD [Escherichia coli IHE3034]
gi|386604349|ref|YP_006110649.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UM146]
gi|419946497|ref|ZP_14462897.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli HM605]
gi|422359811|ref|ZP_16440448.1| FeS assembly protein SufD [Escherichia coli MS 110-3]
gi|422748912|ref|ZP_16802824.1| FeS assembly protein SufD [Escherichia coli H252]
gi|422755017|ref|ZP_16808842.1| FeS assembly protein SufD [Escherichia coli H263]
gi|422838394|ref|ZP_16886367.1| FeS cluster assembly protein sufD [Escherichia coli H397]
gi|432358021|ref|ZP_19601250.1| FeS cluster assembly protein sufD [Escherichia coli KTE4]
gi|432362646|ref|ZP_19605817.1| FeS cluster assembly protein sufD [Escherichia coli KTE5]
gi|432573718|ref|ZP_19810200.1| FeS cluster assembly protein sufD [Escherichia coli KTE55]
gi|432587945|ref|ZP_19824301.1| FeS cluster assembly protein sufD [Escherichia coli KTE58]
gi|432597668|ref|ZP_19833944.1| FeS cluster assembly protein sufD [Escherichia coli KTE62]
gi|432616655|ref|ZP_19852776.1| FeS cluster assembly protein sufD [Escherichia coli KTE75]
gi|432754429|ref|ZP_19988980.1| FeS cluster assembly protein sufD [Escherichia coli KTE22]
gi|432778559|ref|ZP_20012802.1| FeS cluster assembly protein sufD [Escherichia coli KTE59]
gi|432787505|ref|ZP_20021637.1| FeS cluster assembly protein sufD [Escherichia coli KTE65]
gi|432820941|ref|ZP_20054633.1| FeS cluster assembly protein sufD [Escherichia coli KTE118]
gi|432827085|ref|ZP_20060737.1| FeS cluster assembly protein sufD [Escherichia coli KTE123]
gi|433005138|ref|ZP_20193568.1| FeS cluster assembly protein sufD [Escherichia coli KTE227]
gi|433007636|ref|ZP_20196054.1| FeS cluster assembly protein sufD [Escherichia coli KTE229]
gi|433153756|ref|ZP_20338711.1| FeS cluster assembly protein sufD [Escherichia coli KTE176]
gi|433163466|ref|ZP_20348211.1| FeS cluster assembly protein sufD [Escherichia coli KTE179]
gi|433168587|ref|ZP_20353220.1| FeS cluster assembly protein sufD [Escherichia coli KTE180]
gi|450189075|ref|ZP_21890396.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SEPT362]
gi|91072468|gb|ABE07349.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli UTI89]
gi|115512984|gb|ABJ01059.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli APEC O1]
gi|218365319|emb|CAR03040.1| component of SufBCD complex [Escherichia coli S88]
gi|218427187|emb|CAR08073.2| component of SufBCD complex [Escherichia coli ED1a]
gi|226900384|gb|EEH86643.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 3_2_53FAA]
gi|294493567|gb|ADE92323.1| FeS assembly protein SufD [Escherichia coli IHE3034]
gi|307626833|gb|ADN71137.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UM146]
gi|315286393|gb|EFU45829.1| FeS assembly protein SufD [Escherichia coli MS 110-3]
gi|323952188|gb|EGB48061.1| FeS assembly protein SufD [Escherichia coli H252]
gi|323956582|gb|EGB52320.1| FeS assembly protein SufD [Escherichia coli H263]
gi|331079403|gb|EGI50600.1| FeS assembly protein SufD [Escherichia coli H299]
gi|371614318|gb|EHO02803.1| FeS cluster assembly protein sufD [Escherichia coli H397]
gi|388412618|gb|EIL72666.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli HM605]
gi|430878005|gb|ELC01437.1| FeS cluster assembly protein sufD [Escherichia coli KTE4]
gi|430887185|gb|ELC10012.1| FeS cluster assembly protein sufD [Escherichia coli KTE5]
gi|431108429|gb|ELE12401.1| FeS cluster assembly protein sufD [Escherichia coli KTE55]
gi|431120278|gb|ELE23276.1| FeS cluster assembly protein sufD [Escherichia coli KTE58]
gi|431130535|gb|ELE32618.1| FeS cluster assembly protein sufD [Escherichia coli KTE62]
gi|431154895|gb|ELE55656.1| FeS cluster assembly protein sufD [Escherichia coli KTE75]
gi|431302630|gb|ELF91809.1| FeS cluster assembly protein sufD [Escherichia coli KTE22]
gi|431326712|gb|ELG14057.1| FeS cluster assembly protein sufD [Escherichia coli KTE59]
gi|431337222|gb|ELG24310.1| FeS cluster assembly protein sufD [Escherichia coli KTE65]
gi|431367788|gb|ELG54256.1| FeS cluster assembly protein sufD [Escherichia coli KTE118]
gi|431372334|gb|ELG57996.1| FeS cluster assembly protein sufD [Escherichia coli KTE123]
gi|431515043|gb|ELH92870.1| FeS cluster assembly protein sufD [Escherichia coli KTE227]
gi|431524169|gb|ELI01116.1| FeS cluster assembly protein sufD [Escherichia coli KTE229]
gi|431675213|gb|ELJ41358.1| FeS cluster assembly protein sufD [Escherichia coli KTE176]
gi|431688553|gb|ELJ54071.1| FeS cluster assembly protein sufD [Escherichia coli KTE179]
gi|431688911|gb|ELJ54428.1| FeS cluster assembly protein sufD [Escherichia coli KTE180]
gi|449322109|gb|EMD12110.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SEPT362]
Length = 423
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|419175367|ref|ZP_13719212.1| feS assembly protein SufD [Escherichia coli DEC7B]
gi|378034898|gb|EHV97462.1| feS assembly protein SufD [Escherichia coli DEC7B]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 52/313 (16%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQ-------IQPITRPSSSLDVSTDAQFPSLVLIDGFIQ 139
T P+RK E +++T + +SQ I P R + +L + + LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDS----VRLVFVDG--- 91
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDL 192
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ------------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSV 137
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV
Sbjct: 138 THIAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL-- 192
Query: 253 NDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTG 308
ND ++ + + + ++H L + S + AH TA + + G
Sbjct: 193 NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LG 249
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
G + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 250 GAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSD 307
Query: 367 SLGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 308 K-GRAVFNGLINV 319
>gi|15802093|ref|NP_288115.1| cysteine desulfurase [Escherichia coli O157:H7 str. EDL933]
gi|15831642|ref|NP_310415.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. Sakai]
gi|168751908|ref|ZP_02776930.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4113]
gi|168756679|ref|ZP_02781686.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4401]
gi|168762258|ref|ZP_02787265.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4501]
gi|168770440|ref|ZP_02795447.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4486]
gi|168775022|ref|ZP_02800029.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4196]
gi|168782093|ref|ZP_02807100.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4076]
gi|168789815|ref|ZP_02814822.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC869]
gi|168800141|ref|ZP_02825148.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC508]
gi|195937365|ref|ZP_03082747.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. EC4024]
gi|208810501|ref|ZP_03252377.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4206]
gi|208816538|ref|ZP_03257658.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4045]
gi|208821635|ref|ZP_03261955.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4042]
gi|209397107|ref|YP_002270750.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. EC4115]
gi|217329028|ref|ZP_03445109.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. TW14588]
gi|254793298|ref|YP_003078135.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. TW14359]
gi|261227874|ref|ZP_05942155.1| component of SufBCD complex [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258392|ref|ZP_05950925.1| component of SufBCD complex [Escherichia coli O157:H7 str. FRIK966]
gi|291282811|ref|YP_003499629.1| FeS assembly protein SufD [Escherichia coli O55:H7 str. CB9615]
gi|387882785|ref|YP_006313087.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli Xuzhou21]
gi|416312181|ref|ZP_11657382.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1044]
gi|416322896|ref|ZP_11664505.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. EC1212]
gi|416327153|ref|ZP_11667160.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1125]
gi|416773514|ref|ZP_11873721.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. G5101]
gi|416785322|ref|ZP_11878618.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. 493-89]
gi|416796314|ref|ZP_11883533.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. H 2687]
gi|416818175|ref|ZP_11892875.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. 3256-97]
gi|416827288|ref|ZP_11897453.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. USDA 5905]
gi|419045723|ref|ZP_13592669.1| feS assembly protein SufD [Escherichia coli DEC3A]
gi|419051204|ref|ZP_13598085.1| feS assembly protein SufD [Escherichia coli DEC3B]
gi|419057200|ref|ZP_13604015.1| feS assembly protein SufD [Escherichia coli DEC3C]
gi|419062579|ref|ZP_13609318.1| feS assembly protein SufD [Escherichia coli DEC3D]
gi|419069487|ref|ZP_13615123.1| feS assembly protein SufD [Escherichia coli DEC3E]
gi|419075587|ref|ZP_13621119.1| feS assembly protein SufD [Escherichia coli DEC3F]
gi|419080718|ref|ZP_13626175.1| feS assembly protein SufD [Escherichia coli DEC4A]
gi|419086352|ref|ZP_13631722.1| feS assembly protein SufD [Escherichia coli DEC4B]
gi|419092723|ref|ZP_13638016.1| feS assembly protein SufD [Escherichia coli DEC4C]
gi|419098530|ref|ZP_13643743.1| feS assembly protein SufD [Escherichia coli DEC4D]
gi|419103978|ref|ZP_13649119.1| feS assembly protein SufD [Escherichia coli DEC4E]
gi|419109530|ref|ZP_13654597.1| feS assembly protein SufD [Escherichia coli DEC4F]
gi|419114814|ref|ZP_13659836.1| feS assembly protein SufD [Escherichia coli DEC5A]
gi|419120437|ref|ZP_13665403.1| feS assembly protein SufD [Escherichia coli DEC5B]
gi|419136425|ref|ZP_13681226.1| feS assembly protein SufD [Escherichia coli DEC5E]
gi|420269530|ref|ZP_14771903.1| feS assembly protein SufD [Escherichia coli PA22]
gi|420280651|ref|ZP_14782898.1| feS assembly protein SufD [Escherichia coli TW06591]
gi|420286762|ref|ZP_14788959.1| feS assembly protein SufD [Escherichia coli TW10246]
gi|420292412|ref|ZP_14794544.1| feS assembly protein SufD [Escherichia coli TW11039]
gi|420298199|ref|ZP_14800262.1| feS assembly protein SufD [Escherichia coli TW09109]
gi|420304208|ref|ZP_14806215.1| feS assembly protein SufD [Escherichia coli TW10119]
gi|420309612|ref|ZP_14811556.1| feS assembly protein SufD [Escherichia coli EC1738]
gi|420315128|ref|ZP_14817011.1| feS assembly protein SufD [Escherichia coli EC1734]
gi|421818378|ref|ZP_16253891.1| feS assembly protein SufD [Escherichia coli 10.0821]
gi|421823949|ref|ZP_16259344.1| feS assembly protein SufD [Escherichia coli FRIK920]
gi|421830890|ref|ZP_16266188.1| feS assembly protein SufD [Escherichia coli PA7]
gi|423710832|ref|ZP_17685165.1| feS assembly protein SufD [Escherichia coli PA31]
gi|424077509|ref|ZP_17814564.1| feS assembly protein SufD [Escherichia coli FDA505]
gi|424083883|ref|ZP_17820445.1| feS assembly protein SufD [Escherichia coli FDA517]
gi|424090288|ref|ZP_17826318.1| feS assembly protein SufD [Escherichia coli FRIK1996]
gi|424096826|ref|ZP_17832249.1| feS assembly protein SufD [Escherichia coli FRIK1985]
gi|424103166|ref|ZP_17838043.1| feS assembly protein SufD [Escherichia coli FRIK1990]
gi|424109889|ref|ZP_17844209.1| feS assembly protein SufD [Escherichia coli 93-001]
gi|424121965|ref|ZP_17855379.1| feS assembly protein SufD [Escherichia coli PA5]
gi|424128077|ref|ZP_17861055.1| feS assembly protein SufD [Escherichia coli PA9]
gi|424134229|ref|ZP_17866776.1| feS assembly protein SufD [Escherichia coli PA10]
gi|424140918|ref|ZP_17872897.1| feS assembly protein SufD [Escherichia coli PA14]
gi|424147343|ref|ZP_17878806.1| feS assembly protein SufD [Escherichia coli PA15]
gi|424153281|ref|ZP_17884297.1| feS assembly protein SufD [Escherichia coli PA24]
gi|424235458|ref|ZP_17889749.1| feS assembly protein SufD [Escherichia coli PA25]
gi|424449702|ref|ZP_17901478.1| feS assembly protein SufD [Escherichia coli PA32]
gi|424455872|ref|ZP_17907101.1| feS assembly protein SufD [Escherichia coli PA33]
gi|424462171|ref|ZP_17912751.1| feS assembly protein SufD [Escherichia coli PA39]
gi|424468575|ref|ZP_17918490.1| feS assembly protein SufD [Escherichia coli PA41]
gi|424475158|ref|ZP_17924569.1| feS assembly protein SufD [Escherichia coli PA42]
gi|424480906|ref|ZP_17929948.1| feS assembly protein SufD [Escherichia coli TW07945]
gi|424487086|ref|ZP_17935714.1| feS assembly protein SufD [Escherichia coli TW09098]
gi|424493455|ref|ZP_17941383.1| feS assembly protein SufD [Escherichia coli TW09195]
gi|424500348|ref|ZP_17947349.1| feS assembly protein SufD [Escherichia coli EC4203]
gi|424506502|ref|ZP_17953016.1| feS assembly protein SufD [Escherichia coli EC4196]
gi|424520279|ref|ZP_17964474.1| feS assembly protein SufD [Escherichia coli TW14301]
gi|424526188|ref|ZP_17969973.1| feS assembly protein SufD [Escherichia coli EC4421]
gi|424544320|ref|ZP_17986846.1| feS assembly protein SufD [Escherichia coli EC4402]
gi|424550587|ref|ZP_17992535.1| feS assembly protein SufD [Escherichia coli EC4439]
gi|424556835|ref|ZP_17998313.1| feS assembly protein SufD [Escherichia coli EC4436]
gi|424563180|ref|ZP_18004239.1| feS assembly protein SufD [Escherichia coli EC4437]
gi|424569252|ref|ZP_18009904.1| feS assembly protein SufD [Escherichia coli EC4448]
gi|424575382|ref|ZP_18015556.1| feS assembly protein SufD [Escherichia coli EC1845]
gi|424581239|ref|ZP_18020961.1| feS assembly protein SufD [Escherichia coli EC1863]
gi|425098086|ref|ZP_18500881.1| feS assembly protein SufD [Escherichia coli 3.4870]
gi|425104264|ref|ZP_18506630.1| feS assembly protein SufD [Escherichia coli 5.2239]
gi|425110093|ref|ZP_18512091.1| feS assembly protein SufD [Escherichia coli 6.0172]
gi|425125882|ref|ZP_18527147.1| feS assembly protein SufD [Escherichia coli 8.0586]
gi|425131728|ref|ZP_18532633.1| feS assembly protein SufD [Escherichia coli 8.2524]
gi|425138109|ref|ZP_18538579.1| feS assembly protein SufD [Escherichia coli 10.0833]
gi|425144068|ref|ZP_18544129.1| feS assembly protein SufD [Escherichia coli 10.0869]
gi|425150137|ref|ZP_18549819.1| feS assembly protein SufD [Escherichia coli 88.0221]
gi|425155980|ref|ZP_18555308.1| feS assembly protein SufD [Escherichia coli PA34]
gi|425162489|ref|ZP_18561429.1| feS assembly protein SufD [Escherichia coli FDA506]
gi|425168164|ref|ZP_18566711.1| feS assembly protein SufD [Escherichia coli FDA507]
gi|425174255|ref|ZP_18572427.1| feS assembly protein SufD [Escherichia coli FDA504]
gi|425180196|ref|ZP_18577978.1| feS assembly protein SufD [Escherichia coli FRIK1999]
gi|425186424|ref|ZP_18583785.1| feS assembly protein SufD [Escherichia coli FRIK1997]
gi|425193301|ref|ZP_18590151.1| feS assembly protein SufD [Escherichia coli NE1487]
gi|425199691|ref|ZP_18596009.1| feS assembly protein SufD [Escherichia coli NE037]
gi|425206140|ref|ZP_18602021.1| feS assembly protein SufD [Escherichia coli FRIK2001]
gi|425211876|ref|ZP_18607362.1| feS assembly protein SufD [Escherichia coli PA4]
gi|425218004|ref|ZP_18613050.1| feS assembly protein SufD [Escherichia coli PA23]
gi|425224519|ref|ZP_18619083.1| feS assembly protein SufD [Escherichia coli PA49]
gi|425230753|ref|ZP_18624882.1| feS assembly protein SufD [Escherichia coli PA45]
gi|425236904|ref|ZP_18630664.1| feS assembly protein SufD [Escherichia coli TT12B]
gi|425242967|ref|ZP_18636348.1| feS assembly protein SufD [Escherichia coli MA6]
gi|425249128|ref|ZP_18642124.1| feS assembly protein SufD [Escherichia coli 5905]
gi|425254896|ref|ZP_18647490.1| feS assembly protein SufD [Escherichia coli CB7326]
gi|425261191|ref|ZP_18653279.1| feS assembly protein SufD [Escherichia coli EC96038]
gi|425267227|ref|ZP_18658912.1| feS assembly protein SufD [Escherichia coli 5412]
gi|425294682|ref|ZP_18684969.1| feS assembly protein SufD [Escherichia coli PA38]
gi|425311374|ref|ZP_18700620.1| feS assembly protein SufD [Escherichia coli EC1735]
gi|425317299|ref|ZP_18706153.1| feS assembly protein SufD [Escherichia coli EC1736]
gi|425323403|ref|ZP_18711837.1| feS assembly protein SufD [Escherichia coli EC1737]
gi|425329564|ref|ZP_18717534.1| feS assembly protein SufD [Escherichia coli EC1846]
gi|425335731|ref|ZP_18723222.1| feS assembly protein SufD [Escherichia coli EC1847]
gi|425342158|ref|ZP_18729139.1| feS assembly protein SufD [Escherichia coli EC1848]
gi|425347970|ref|ZP_18734543.1| feS assembly protein SufD [Escherichia coli EC1849]
gi|425354271|ref|ZP_18740417.1| feS assembly protein SufD [Escherichia coli EC1850]
gi|425360241|ref|ZP_18745975.1| feS assembly protein SufD [Escherichia coli EC1856]
gi|425366366|ref|ZP_18751655.1| feS assembly protein SufD [Escherichia coli EC1862]
gi|425372790|ref|ZP_18757525.1| feS assembly protein SufD [Escherichia coli EC1864]
gi|425385614|ref|ZP_18769262.1| feS assembly protein SufD [Escherichia coli EC1866]
gi|425392305|ref|ZP_18775504.1| feS assembly protein SufD [Escherichia coli EC1868]
gi|425398460|ref|ZP_18781249.1| feS assembly protein SufD [Escherichia coli EC1869]
gi|425404492|ref|ZP_18786823.1| feS assembly protein SufD [Escherichia coli EC1870]
gi|425411065|ref|ZP_18792909.1| feS assembly protein SufD [Escherichia coli NE098]
gi|425417372|ref|ZP_18798718.1| feS assembly protein SufD [Escherichia coli FRIK523]
gi|425428628|ref|ZP_18809323.1| feS assembly protein SufD [Escherichia coli 0.1304]
gi|428946973|ref|ZP_19019362.1| feS assembly protein SufD [Escherichia coli 88.1467]
gi|428953223|ref|ZP_19025073.1| feS assembly protein SufD [Escherichia coli 88.1042]
gi|428959145|ref|ZP_19030526.1| feS assembly protein SufD [Escherichia coli 89.0511]
gi|428965598|ref|ZP_19036455.1| feS assembly protein SufD [Escherichia coli 90.0091]
gi|428971399|ref|ZP_19041820.1| feS assembly protein SufD [Escherichia coli 90.0039]
gi|428978008|ref|ZP_19047898.1| feS assembly protein SufD [Escherichia coli 90.2281]
gi|428983709|ref|ZP_19053166.1| feS assembly protein SufD [Escherichia coli 93.0055]
gi|429001847|ref|ZP_19070091.1| feS assembly protein SufD [Escherichia coli 95.0183]
gi|429008111|ref|ZP_19075717.1| feS assembly protein SufD [Escherichia coli 95.1288]
gi|429014600|ref|ZP_19081570.1| feS assembly protein SufD [Escherichia coli 95.0943]
gi|429020569|ref|ZP_19087145.1| feS assembly protein SufD [Escherichia coli 96.0428]
gi|429026512|ref|ZP_19092608.1| feS assembly protein SufD [Escherichia coli 96.0427]
gi|429032590|ref|ZP_19098198.1| feS assembly protein SufD [Escherichia coli 96.0939]
gi|429038736|ref|ZP_19103927.1| feS assembly protein SufD [Escherichia coli 96.0932]
gi|429044813|ref|ZP_19109581.1| feS assembly protein SufD [Escherichia coli 96.0107]
gi|429050183|ref|ZP_19114786.1| feS assembly protein SufD [Escherichia coli 97.0003]
gi|429055443|ref|ZP_19119847.1| feS assembly protein SufD [Escherichia coli 97.1742]
gi|429061094|ref|ZP_19125164.1| feS assembly protein SufD [Escherichia coli 97.0007]
gi|429067192|ref|ZP_19130739.1| feS assembly protein SufD [Escherichia coli 99.0672]
gi|429073194|ref|ZP_19136486.1| feS assembly protein SufD [Escherichia coli 99.0678]
gi|429078521|ref|ZP_19141686.1| feS assembly protein SufD [Escherichia coli 99.0713]
gi|429832712|ref|ZP_19363195.1| feS assembly protein SufD [Escherichia coli 97.0010]
gi|444930734|ref|ZP_21249820.1| feS assembly protein SufD [Escherichia coli 99.0814]
gi|444936021|ref|ZP_21254863.1| feS assembly protein SufD [Escherichia coli 99.0815]
gi|444941661|ref|ZP_21260235.1| feS assembly protein SufD [Escherichia coli 99.0816]
gi|444947299|ref|ZP_21265655.1| feS assembly protein SufD [Escherichia coli 99.0839]
gi|444952850|ref|ZP_21270992.1| feS assembly protein SufD [Escherichia coli 99.0848]
gi|444958349|ref|ZP_21276253.1| feS assembly protein SufD [Escherichia coli 99.1753]
gi|444963593|ref|ZP_21281257.1| feS assembly protein SufD [Escherichia coli 99.1775]
gi|444969405|ref|ZP_21286812.1| feS assembly protein SufD [Escherichia coli 99.1793]
gi|444974747|ref|ZP_21291932.1| feS assembly protein SufD [Escherichia coli 99.1805]
gi|444980239|ref|ZP_21297183.1| feS assembly protein SufD [Escherichia coli ATCC 700728]
gi|444985559|ref|ZP_21302375.1| feS assembly protein SufD [Escherichia coli PA11]
gi|444990847|ref|ZP_21307530.1| feS assembly protein SufD [Escherichia coli PA19]
gi|444996050|ref|ZP_21312589.1| feS assembly protein SufD [Escherichia coli PA13]
gi|445001675|ref|ZP_21318095.1| feS assembly protein SufD [Escherichia coli PA2]
gi|445007132|ref|ZP_21323417.1| feS assembly protein SufD [Escherichia coli PA47]
gi|445012264|ref|ZP_21328405.1| feS assembly protein SufD [Escherichia coli PA48]
gi|445018000|ref|ZP_21333996.1| feS assembly protein SufD [Escherichia coli PA8]
gi|445023647|ref|ZP_21339507.1| feS assembly protein SufD [Escherichia coli 7.1982]
gi|445028887|ref|ZP_21344602.1| feS assembly protein SufD [Escherichia coli 99.1781]
gi|445034335|ref|ZP_21349898.1| feS assembly protein SufD [Escherichia coli 99.1762]
gi|445040040|ref|ZP_21355447.1| feS assembly protein SufD [Escherichia coli PA35]
gi|445045172|ref|ZP_21360464.1| feS assembly protein SufD [Escherichia coli 3.4880]
gi|445050794|ref|ZP_21365890.1| feS assembly protein SufD [Escherichia coli 95.0083]
gi|445056577|ref|ZP_21371467.1| feS assembly protein SufD [Escherichia coli 99.0670]
gi|452971118|ref|ZP_21969345.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. EC4009]
gi|12515683|gb|AAG56668.1|AE005391_5 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13361855|dbj|BAB35811.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187769397|gb|EDU33241.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4196]
gi|188014123|gb|EDU52245.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4113]
gi|189000349|gb|EDU69335.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4076]
gi|189356214|gb|EDU74633.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4401]
gi|189360642|gb|EDU79061.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4486]
gi|189367525|gb|EDU85941.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4501]
gi|189370617|gb|EDU89033.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC869]
gi|189377610|gb|EDU96026.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC508]
gi|208725017|gb|EDZ74724.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4206]
gi|208730881|gb|EDZ79570.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4045]
gi|208741758|gb|EDZ89440.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4042]
gi|209158507|gb|ACI35940.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4115]
gi|209769178|gb|ACI82901.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769180|gb|ACI82902.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769182|gb|ACI82903.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769186|gb|ACI82905.1| hypothetical protein ECs2388 [Escherichia coli]
gi|217318375|gb|EEC26802.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. TW14588]
gi|254592698|gb|ACT72059.1| component of SufBCD complex [Escherichia coli O157:H7 str. TW14359]
gi|290762684|gb|ADD56645.1| FeS assembly protein SufD [Escherichia coli O55:H7 str. CB9615]
gi|320188369|gb|EFW63031.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. EC1212]
gi|320641896|gb|EFX11264.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. G5101]
gi|320647352|gb|EFX16160.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. 493-89]
gi|320652646|gb|EFX20915.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. H 2687]
gi|320653031|gb|EFX21227.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320658715|gb|EFX26392.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. USDA 5905]
gi|326342048|gb|EGD65829.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1044]
gi|326343600|gb|EGD67362.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1125]
gi|377895320|gb|EHU59733.1| feS assembly protein SufD [Escherichia coli DEC3A]
gi|377895528|gb|EHU59939.1| feS assembly protein SufD [Escherichia coli DEC3B]
gi|377906481|gb|EHU70723.1| feS assembly protein SufD [Escherichia coli DEC3C]
gi|377911816|gb|EHU75981.1| feS assembly protein SufD [Escherichia coli DEC3D]
gi|377914545|gb|EHU78667.1| feS assembly protein SufD [Escherichia coli DEC3E]
gi|377923858|gb|EHU87819.1| feS assembly protein SufD [Escherichia coli DEC3F]
gi|377928200|gb|EHU92111.1| feS assembly protein SufD [Escherichia coli DEC4A]
gi|377932772|gb|EHU96618.1| feS assembly protein SufD [Escherichia coli DEC4B]
gi|377944012|gb|EHV07721.1| feS assembly protein SufD [Escherichia coli DEC4C]
gi|377944846|gb|EHV08548.1| feS assembly protein SufD [Escherichia coli DEC4D]
gi|377949791|gb|EHV13422.1| feS assembly protein SufD [Escherichia coli DEC4E]
gi|377958737|gb|EHV22249.1| feS assembly protein SufD [Escherichia coli DEC4F]
gi|377962019|gb|EHV25482.1| feS assembly protein SufD [Escherichia coli DEC5A]
gi|377968644|gb|EHV32035.1| feS assembly protein SufD [Escherichia coli DEC5B]
gi|377985613|gb|EHV48825.1| feS assembly protein SufD [Escherichia coli DEC5E]
gi|386796243|gb|AFJ29277.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli Xuzhou21]
gi|390645463|gb|EIN24640.1| feS assembly protein SufD [Escherichia coli FDA517]
gi|390645634|gb|EIN24806.1| feS assembly protein SufD [Escherichia coli FRIK1996]
gi|390646175|gb|EIN25301.1| feS assembly protein SufD [Escherichia coli FDA505]
gi|390663772|gb|EIN41258.1| feS assembly protein SufD [Escherichia coli 93-001]
gi|390665238|gb|EIN42549.1| feS assembly protein SufD [Escherichia coli FRIK1985]
gi|390666198|gb|EIN43394.1| feS assembly protein SufD [Escherichia coli FRIK1990]
gi|390684834|gb|EIN60438.1| feS assembly protein SufD [Escherichia coli PA5]
gi|390685846|gb|EIN61301.1| feS assembly protein SufD [Escherichia coli PA9]
gi|390701995|gb|EIN76212.1| feS assembly protein SufD [Escherichia coli PA10]
gi|390703146|gb|EIN77185.1| feS assembly protein SufD [Escherichia coli PA15]
gi|390703940|gb|EIN77930.1| feS assembly protein SufD [Escherichia coli PA14]
gi|390715732|gb|EIN88568.1| feS assembly protein SufD [Escherichia coli PA22]
gi|390727116|gb|EIN99536.1| feS assembly protein SufD [Escherichia coli PA25]
gi|390727511|gb|EIN99919.1| feS assembly protein SufD [Escherichia coli PA24]
gi|390745253|gb|EIO16060.1| feS assembly protein SufD [Escherichia coli PA32]
gi|390746225|gb|EIO16984.1| feS assembly protein SufD [Escherichia coli PA31]
gi|390747779|gb|EIO18324.1| feS assembly protein SufD [Escherichia coli PA33]
gi|390770079|gb|EIO38968.1| feS assembly protein SufD [Escherichia coli PA41]
gi|390771868|gb|EIO40521.1| feS assembly protein SufD [Escherichia coli PA39]
gi|390771946|gb|EIO40593.1| feS assembly protein SufD [Escherichia coli PA42]
gi|390782592|gb|EIO50226.1| feS assembly protein SufD [Escherichia coli TW06591]
gi|390790942|gb|EIO58337.1| feS assembly protein SufD [Escherichia coli TW10246]
gi|390797034|gb|EIO64300.1| feS assembly protein SufD [Escherichia coli TW07945]
gi|390798211|gb|EIO65407.1| feS assembly protein SufD [Escherichia coli TW11039]
gi|390808389|gb|EIO75228.1| feS assembly protein SufD [Escherichia coli TW09109]
gi|390809930|gb|EIO76706.1| feS assembly protein SufD [Escherichia coli TW09098]
gi|390816894|gb|EIO83354.1| feS assembly protein SufD [Escherichia coli TW10119]
gi|390829611|gb|EIO95211.1| feS assembly protein SufD [Escherichia coli EC4203]
gi|390832807|gb|EIO98013.1| feS assembly protein SufD [Escherichia coli TW09195]
gi|390834252|gb|EIO99218.1| feS assembly protein SufD [Escherichia coli EC4196]
gi|390849306|gb|EIP12747.1| feS assembly protein SufD [Escherichia coli TW14301]
gi|390852503|gb|EIP15663.1| feS assembly protein SufD [Escherichia coli EC4421]
gi|390873873|gb|EIP35043.1| feS assembly protein SufD [Escherichia coli EC4402]
gi|390880858|gb|EIP41526.1| feS assembly protein SufD [Escherichia coli EC4439]
gi|390885348|gb|EIP45588.1| feS assembly protein SufD [Escherichia coli EC4436]
gi|390896875|gb|EIP56255.1| feS assembly protein SufD [Escherichia coli EC4437]
gi|390900784|gb|EIP59996.1| feS assembly protein SufD [Escherichia coli EC4448]
gi|390901059|gb|EIP60243.1| feS assembly protein SufD [Escherichia coli EC1738]
gi|390908829|gb|EIP67630.1| feS assembly protein SufD [Escherichia coli EC1734]
gi|390921050|gb|EIP79273.1| feS assembly protein SufD [Escherichia coli EC1863]
gi|390922322|gb|EIP80421.1| feS assembly protein SufD [Escherichia coli EC1845]
gi|408066932|gb|EKH01375.1| feS assembly protein SufD [Escherichia coli PA7]
gi|408071337|gb|EKH05689.1| feS assembly protein SufD [Escherichia coli FRIK920]
gi|408076597|gb|EKH10819.1| feS assembly protein SufD [Escherichia coli PA34]
gi|408082269|gb|EKH16256.1| feS assembly protein SufD [Escherichia coli FDA506]
gi|408084674|gb|EKH18437.1| feS assembly protein SufD [Escherichia coli FDA507]
gi|408093470|gb|EKH26559.1| feS assembly protein SufD [Escherichia coli FDA504]
gi|408099331|gb|EKH31980.1| feS assembly protein SufD [Escherichia coli FRIK1999]
gi|408107361|gb|EKH39444.1| feS assembly protein SufD [Escherichia coli FRIK1997]
gi|408110941|gb|EKH42720.1| feS assembly protein SufD [Escherichia coli NE1487]
gi|408117834|gb|EKH49008.1| feS assembly protein SufD [Escherichia coli NE037]
gi|408123800|gb|EKH54529.1| feS assembly protein SufD [Escherichia coli FRIK2001]
gi|408129546|gb|EKH59765.1| feS assembly protein SufD [Escherichia coli PA4]
gi|408140849|gb|EKH70329.1| feS assembly protein SufD [Escherichia coli PA23]
gi|408142906|gb|EKH72250.1| feS assembly protein SufD [Escherichia coli PA49]
gi|408148155|gb|EKH77059.1| feS assembly protein SufD [Escherichia coli PA45]
gi|408156324|gb|EKH84527.1| feS assembly protein SufD [Escherichia coli TT12B]
gi|408163542|gb|EKH91405.1| feS assembly protein SufD [Escherichia coli MA6]
gi|408165549|gb|EKH93226.1| feS assembly protein SufD [Escherichia coli 5905]
gi|408176984|gb|EKI03811.1| feS assembly protein SufD [Escherichia coli CB7326]
gi|408183772|gb|EKI10194.1| feS assembly protein SufD [Escherichia coli EC96038]
gi|408184673|gb|EKI10990.1| feS assembly protein SufD [Escherichia coli 5412]
gi|408220629|gb|EKI44669.1| feS assembly protein SufD [Escherichia coli PA38]
gi|408229969|gb|EKI53392.1| feS assembly protein SufD [Escherichia coli EC1735]
gi|408241609|gb|EKI64255.1| feS assembly protein SufD [Escherichia coli EC1736]
gi|408245405|gb|EKI67793.1| feS assembly protein SufD [Escherichia coli EC1737]
gi|408249871|gb|EKI71780.1| feS assembly protein SufD [Escherichia coli EC1846]
gi|408260246|gb|EKI81375.1| feS assembly protein SufD [Escherichia coli EC1847]
gi|408262369|gb|EKI83318.1| feS assembly protein SufD [Escherichia coli EC1848]
gi|408267886|gb|EKI88322.1| feS assembly protein SufD [Escherichia coli EC1849]
gi|408277900|gb|EKI97680.1| feS assembly protein SufD [Escherichia coli EC1850]
gi|408280092|gb|EKI99672.1| feS assembly protein SufD [Escherichia coli EC1856]
gi|408291706|gb|EKJ10290.1| feS assembly protein SufD [Escherichia coli EC1862]
gi|408293706|gb|EKJ12127.1| feS assembly protein SufD [Escherichia coli EC1864]
gi|408310653|gb|EKJ27694.1| feS assembly protein SufD [Escherichia coli EC1868]
gi|408311179|gb|EKJ28189.1| feS assembly protein SufD [Escherichia coli EC1866]
gi|408323420|gb|EKJ39382.1| feS assembly protein SufD [Escherichia coli EC1869]
gi|408328354|gb|EKJ43964.1| feS assembly protein SufD [Escherichia coli NE098]
gi|408328799|gb|EKJ44338.1| feS assembly protein SufD [Escherichia coli EC1870]
gi|408339276|gb|EKJ53888.1| feS assembly protein SufD [Escherichia coli FRIK523]
gi|408348894|gb|EKJ62972.1| feS assembly protein SufD [Escherichia coli 0.1304]
gi|408552041|gb|EKK29273.1| feS assembly protein SufD [Escherichia coli 5.2239]
gi|408552803|gb|EKK29966.1| feS assembly protein SufD [Escherichia coli 3.4870]
gi|408553346|gb|EKK30467.1| feS assembly protein SufD [Escherichia coli 6.0172]
gi|408574531|gb|EKK50300.1| feS assembly protein SufD [Escherichia coli 8.0586]
gi|408582759|gb|EKK57968.1| feS assembly protein SufD [Escherichia coli 10.0833]
gi|408583399|gb|EKK58567.1| feS assembly protein SufD [Escherichia coli 8.2524]
gi|408594529|gb|EKK68810.1| feS assembly protein SufD [Escherichia coli 10.0869]
gi|408598498|gb|EKK72453.1| feS assembly protein SufD [Escherichia coli 88.0221]
gi|408614025|gb|EKK87309.1| feS assembly protein SufD [Escherichia coli 10.0821]
gi|427207811|gb|EKV77973.1| feS assembly protein SufD [Escherichia coli 88.1042]
gi|427209551|gb|EKV79581.1| feS assembly protein SufD [Escherichia coli 89.0511]
gi|427210898|gb|EKV80744.1| feS assembly protein SufD [Escherichia coli 88.1467]
gi|427226487|gb|EKV95076.1| feS assembly protein SufD [Escherichia coli 90.0091]
gi|427226793|gb|EKV95377.1| feS assembly protein SufD [Escherichia coli 90.2281]
gi|427229844|gb|EKV98146.1| feS assembly protein SufD [Escherichia coli 90.0039]
gi|427245679|gb|EKW12954.1| feS assembly protein SufD [Escherichia coli 93.0055]
gi|427263791|gb|EKW29542.1| feS assembly protein SufD [Escherichia coli 95.0943]
gi|427264642|gb|EKW30313.1| feS assembly protein SufD [Escherichia coli 95.0183]
gi|427266520|gb|EKW31953.1| feS assembly protein SufD [Escherichia coli 95.1288]
gi|427279192|gb|EKW43643.1| feS assembly protein SufD [Escherichia coli 96.0428]
gi|427282866|gb|EKW47107.1| feS assembly protein SufD [Escherichia coli 96.0427]
gi|427285425|gb|EKW49409.1| feS assembly protein SufD [Escherichia coli 96.0939]
gi|427294475|gb|EKW57654.1| feS assembly protein SufD [Escherichia coli 96.0932]
gi|427301787|gb|EKW64642.1| feS assembly protein SufD [Escherichia coli 96.0107]
gi|427302088|gb|EKW64924.1| feS assembly protein SufD [Escherichia coli 97.0003]
gi|427316318|gb|EKW78275.1| feS assembly protein SufD [Escherichia coli 97.1742]
gi|427318240|gb|EKW80120.1| feS assembly protein SufD [Escherichia coli 97.0007]
gi|427322605|gb|EKW84234.1| feS assembly protein SufD [Escherichia coli 99.0672]
gi|427330378|gb|EKW91649.1| feS assembly protein SufD [Escherichia coli 99.0678]
gi|427330798|gb|EKW92059.1| feS assembly protein SufD [Escherichia coli 99.0713]
gi|429257247|gb|EKY41338.1| feS assembly protein SufD [Escherichia coli 97.0010]
gi|444539828|gb|ELV19535.1| feS assembly protein SufD [Escherichia coli 99.0814]
gi|444548925|gb|ELV27259.1| feS assembly protein SufD [Escherichia coli 99.0815]
gi|444559970|gb|ELV37163.1| feS assembly protein SufD [Escherichia coli 99.0839]
gi|444561622|gb|ELV38725.1| feS assembly protein SufD [Escherichia coli 99.0816]
gi|444566334|gb|ELV43169.1| feS assembly protein SufD [Escherichia coli 99.0848]
gi|444575959|gb|ELV52179.1| feS assembly protein SufD [Escherichia coli 99.1753]
gi|444579991|gb|ELV55954.1| feS assembly protein SufD [Escherichia coli 99.1775]
gi|444581545|gb|ELV57383.1| feS assembly protein SufD [Escherichia coli 99.1793]
gi|444595753|gb|ELV70849.1| feS assembly protein SufD [Escherichia coli PA11]
gi|444595956|gb|ELV71051.1| feS assembly protein SufD [Escherichia coli ATCC 700728]
gi|444598466|gb|ELV73387.1| feS assembly protein SufD [Escherichia coli 99.1805]
gi|444609341|gb|ELV83799.1| feS assembly protein SufD [Escherichia coli PA13]
gi|444609731|gb|ELV84186.1| feS assembly protein SufD [Escherichia coli PA19]
gi|444617792|gb|ELV91899.1| feS assembly protein SufD [Escherichia coli PA2]
gi|444626535|gb|ELW00327.1| feS assembly protein SufD [Escherichia coli PA48]
gi|444626900|gb|ELW00689.1| feS assembly protein SufD [Escherichia coli PA47]
gi|444632218|gb|ELW05794.1| feS assembly protein SufD [Escherichia coli PA8]
gi|444641514|gb|ELW14744.1| feS assembly protein SufD [Escherichia coli 7.1982]
gi|444644564|gb|ELW17674.1| feS assembly protein SufD [Escherichia coli 99.1781]
gi|444647748|gb|ELW20711.1| feS assembly protein SufD [Escherichia coli 99.1762]
gi|444656309|gb|ELW28839.1| feS assembly protein SufD [Escherichia coli PA35]
gi|444662638|gb|ELW34890.1| feS assembly protein SufD [Escherichia coli 3.4880]
gi|444668122|gb|ELW40146.1| feS assembly protein SufD [Escherichia coli 95.0083]
gi|444671294|gb|ELW43122.1| feS assembly protein SufD [Escherichia coli 99.0670]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLELAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFSINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|387871433|ref|YP_005802807.1| FeS assembly protein SufD [Erwinia pyrifoliae DSM 12163]
gi|283478520|emb|CAY74436.1| FeS assembly protein SufD [Erwinia pyrifoliae DSM 12163]
Length = 426
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 140/311 (45%), Gaps = 32/311 (10%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSS---LDVSTDAQFPSLVLID 135
Q LL P+RK E +++T + ++Q +P + + L + DA LV ID
Sbjct: 35 QQLLRAGLPTRKQEDWKYTPLDQLLNNQFVLPEPAALDAEAIKALALPIDA--VRLVFID 92
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G + LS+ ++ ++ ++ +R ++E ++F + A + +I
Sbjct: 93 GRF---SPELSDSEHDLFTIQMVQAAE---RRE---LNEPVHPEVFLHLTESLAEQVTLI 143
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+ G P+YL ++S + +L S+ R + ++E E +IE +V + +
Sbjct: 144 QLARGKAAARPLYLLHIS---SGSSTGELNTSHYRHHLQLDEAAEATVIEHYVSLDA-EP 199
Query: 256 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + +G + H ++ +S + +H T R + + G L+
Sbjct: 200 HFTGARFTAEVGNNAALTHYNLAFEDCRSYHFSHNDLTLGRDTRVQSHSFL---LGAGLT 256
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RH+ + G ++ ++S L + + D SR L+H +GYC RQLHK IV +
Sbjct: 257 RHHTSTRLNGEGSDLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV-RDRAR 313
Query: 371 AVFDGNVKVNR 381
AVF+G +KV R
Sbjct: 314 AVFNGIIKVAR 324
>gi|422022558|ref|ZP_16369065.1| cysteine desulfurase activator complex subunit SufD [Providencia
sneebia DSM 19967]
gi|414095728|gb|EKT57388.1| cysteine desulfurase activator complex subunit SufD [Providencia
sneebia DSM 19967]
Length = 434
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 30/256 (11%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
+VL+DG ++ LS++ G + SLL + + ++ ++F + A
Sbjct: 100 IVLVDGHYSSA---LSSIDTGPFQVSLLDNQELLPAPIN--------SEIFLHLTESLAQ 148
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
VI++ A + E P+YL L++ G D +++ S R + + + + +IE FV
Sbjct: 149 QPVVIHLAANNQAEKPLYL--LNISSGK-DGEEVNTSQYRYHITLGKNSQAQVIEHFVSL 205
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR-----QETASGYELVEV 305
+ ++ S L V +G + +H L +++ H ++ Q +S + L
Sbjct: 206 -NDKAHFTGSRLTVEVGDNAQFKHFKLNSENEQVQHFAHNDIKIGRDSQVLSSSFLL--- 261
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCI 363
G KL+RH+ Q G + L+S L + + D +R L+H YC RQLHK I
Sbjct: 262 --GAKLTRHHTSTQLNGENANLSLNSLLLPKNTEIAD--TRTYLEHNAEYCESRQLHKVI 317
Query: 364 VAHSLGQAVFDGNVKV 379
S +AVF+G +KV
Sbjct: 318 AMDS-SKAVFNGMIKV 332
>gi|417084616|ref|ZP_11952255.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli cloneA_i1]
gi|355351791|gb|EHG00978.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli cloneA_i1]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 44/309 (14%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVS-----DFISEFQCGDLFWSINGMGAPDLGVIY 196
YV +L ++G VS + + G++F + A + I
Sbjct: 92 ----------RYVPALSDATEGSGYEVSINDDHQGLPDAIQGEVFLHLTERLAQSVTNIA 141
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC- 255
V + P+ L ++S V +++ ++ R + + EG E +IE FV ND
Sbjct: 142 VKRSQRPAKPLLLMHIS---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDAR 196
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + + + ++H L + S + AH TA + + GG +
Sbjct: 197 HFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVL 253
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+
Sbjct: 254 RHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GR 310
Query: 371 AVFDGNVKV 379
AVF+G + V
Sbjct: 311 AVFNGLINV 319
>gi|163753693|ref|ZP_02160816.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
gi|161325907|gb|EDP97233.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
Length = 439
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 139/341 (40%), Gaps = 24/341 (7%)
Query: 56 LEDSLPSSSSSLPQPLP-----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
L+D L SS L L ++R+ + T +PS+KDE +++T + +
Sbjct: 3 LKDKLLSSFMVFEDRLNDESKHLNEIRNEAINTFQQKGFPSKKDEDWKYTSLNALLKHDY 62
Query: 111 QPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
+ ++++ D +V IDG + S+ DG+ V + +
Sbjct: 63 CISPQQETAVEFKEIKKYFIHDIDTYKIVFIDG--KYSSFLSETTHDGIDVCLMSSALNK 120
Query: 164 IMKRV---SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
++ S + + S+N A + I++P VE PI + + S GN
Sbjct: 121 PKYKIIIDSYYNKAAKSDHSLTSLNTAFASEGAYIHIPKNKVVEKPIQIIHFST--GNEA 178
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ L PR +++V E V IIE N NSV EV K V + +QN
Sbjct: 179 TLMLQ---PRNLIVVGENSHVQIIERHQSLTSN-VVLTNSVTEVFANKRAIVDYYKIQND 234
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ A+ I T + Q+ +S + S GGKL R+N+ Q G ++ + ++ Q
Sbjct: 235 NQQASLIDNTYISQKQSSHASVHTFSFGGKLVRNNLQFFQKGEHIDSTMKGITIIGDKQH 294
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K I VF+G V V +
Sbjct: 295 VDHNTLVHHIEPNCESHQDYKGIFG-DRSTGVFNGKVVVEK 334
>gi|238895188|ref|YP_002919923.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|402780358|ref|YP_006635904.1| iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|238547505|dbj|BAH63856.1| Fe-S cluster assembly protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402541264|gb|AFQ65413.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 424
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 128/307 (41%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q LL P+RK E +++T + + + S S + P LV IDG
Sbjct: 34 QQLLRLGLPTRKHEDWKYTPLDALLNGRFVADEGASLSAEQRDALALPLDAWRLVFIDGC 93
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
L D + + D + + D + ++F + A + I V
Sbjct: 94 YH------PQLSDDLAASGVEVSVDNQRQHLPDALQP----EVFLHLTESLAQTVTRIRV 143
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P +++ P+ L +++ + L ++ R + +E G E I+E ++ ++
Sbjct: 144 PRNRRLDKPLLLMHIT---SGLTGDALNTAHYRHHLALESGAEATIVEHYLSL-NEQPHF 199
Query: 258 ANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
L + + ++H ++ +S + AH R +A + GG++ RH
Sbjct: 200 TGGRLTMTVADNAHLQHIKLAFENARSYHFAHNDLLLGRDASAFSSSFL---LGGQVLRH 256
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
+ G ++ L+S + V ++ D SR LDH GYC RQLHK IV+ G+AV
Sbjct: 257 QTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVSDK-GRAV 313
Query: 373 FDGNVKV 379
F+G + V
Sbjct: 314 FNGLINV 320
>gi|415815789|ref|ZP_11507220.1| feS assembly protein SufD [Escherichia coli LT-68]
gi|323169994|gb|EFZ55650.1| feS assembly protein SufD [Escherichia coli LT-68]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++ + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINRLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|393786113|ref|ZP_10374252.1| FeS assembly protein SufD [Bacteroides nordii CL02T12C05]
gi|392660697|gb|EIY54305.1| FeS assembly protein SufD [Bacteroides nordii CL02T12C05]
Length = 447
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 21/274 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDISKFFAPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLFFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL V++ V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEVAEQHPDLVKKYYGKLADTSKDAVTAFNTAFAQDGVLMYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ +V+ + N RV++++EEG + ++ +G + +
Sbjct: 161 PKNVVVERPIQL--INILRADVNF----MVNRRVLIILEEGAQARLLMCDHAMDGVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
A V+EV G L+ + I V+QE S L ++ +R+
Sbjct: 214 ATQVVEVFAGANSVFDLYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNTTE 273
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 351
V G E L + ++D+ Q + + +DH
Sbjct: 274 VTLAGEGAEINLCG--MAIADKNQHVDNNTTIDH 305
>gi|365898208|ref|ZP_09436178.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
gi|365421018|emb|CCE08720.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
Length = 438
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 54/339 (15%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI-------------QPI 113
LP + LR + P R+ E +++TD + +
Sbjct: 25 LPGKGRVADLRREAFAAFERAGLPHRRVEEWKYTDLRALMRELLPQAAAPDAAALARAKA 84
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
PS ++D +T LVL+DG + L DG+ G VS ++ V + S
Sbjct: 85 ALPSVTIDGAT-----RLVLVDGMFA------AELSDGIQAG----VSVRTLRDVLENES 129
Query: 174 EFQCGDLFW--------SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
GDL S+N A D V+ + G ++ P+ + +++ G +
Sbjct: 130 NEARGDLLLTTSTDAMISLNAALATDGVVVGIADGVQLSAPLQIIHVATAGKTSRYTRSH 189
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
+ V +G ++E V EG + Y AN + IG G ++ H L + +A
Sbjct: 190 LQ-------VGKGARATLVETCVAAEGANAYQANDAAVIWIGDGVELSHIRLMRDAPDAF 242
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
++ V S L +++GG +SR + G D+E ++ +LL Q D +
Sbjct: 243 NVTSNIVTVGARSKLNLFNMTSGGAVSRLQGFITLAGEDSELTVNGVNLLRGKQHGD--T 300
Query: 346 RLLLDHPRGYC--RQLHKCIV---AHSLGQAVFDGNVKV 379
L++DH C R+ + ++ AHS VF G + V
Sbjct: 301 TLVVDHAVPGCTSRENFRAVLDDRAHS----VFQGRIIV 335
>gi|224536658|ref|ZP_03677197.1| hypothetical protein BACCELL_01534 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521749|gb|EEF90854.1| hypothetical protein BACCELL_01534 [Bacteroides cellulosilyticus
DSM 14838]
Length = 447
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++ + V + + D + N A D ++Y+
Sbjct: 101 NKALPASHLPEGVIFGSLKEMAAKHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYI 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P +E PI L +++ G+V+ + N RV++++E+G + ++ V D
Sbjct: 161 PKNVALERPIQL--VNILRGDVNF----LVNRRVLIVLEDGAQARML---VCDHAMDAVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV +G+ L+ + I V+QE S L ++ SR+
Sbjct: 212 FLATQVIEVFVGENAVFDLYELEETHTSTVRISNMYVKQEANSNVLLNGMTLHNGTSRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEVNLCG--MAIADKNQHVDNNTSIDHAVPNC 310
>gi|204927622|ref|ZP_03218823.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|452120458|ref|YP_007470706.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
gi|204322964|gb|EDZ08160.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|451909462|gb|AGF81268.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 146/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGVSRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VDS +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDSDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|256422368|ref|YP_003123021.1| FeS assembly protein SufD [Chitinophaga pinensis DSM 2588]
gi|256037276|gb|ACU60820.1| FeS assembly protein SufD [Chitinophaga pinensis DSM 2588]
Length = 439
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 195 IYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+++ AG ++ P+ + ++ N PR +V++ + + IIE VG
Sbjct: 154 LFIEAGVNATLDKPLQIIHVYTASANA------FIQPRHLVVLHKSATLEIIESAVGLND 207
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVST-GGKL 311
+ + N+V EVV+ + ++ H +Q+ N+ HI T+ Q+ S Y + +L
Sbjct: 208 SAIAFVNAVTEVVLEENAELWHYNIQSTIKNSRHIYHTSATQKADSRYHHFNFTLPSAEL 267
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLG 369
+R+N+ V G +TET L +L Q D H+ +DH P +L+K ++
Sbjct: 268 TRNNLSVALTGSNTETNLHGLYLATGSQHVDNHT--FVDHLVPNCNSNELYKGVLLDD-A 324
Query: 370 QAVFDGNVKVNR 381
VF G + V++
Sbjct: 325 NGVFTGKIHVHQ 336
>gi|421774034|ref|ZP_16210647.1| FeS assembly protein SufD [Escherichia coli AD30]
gi|408460664|gb|EKJ84442.1| FeS assembly protein SufD [Escherichia coli AD30]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 52/313 (16%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQ-------IQPITRPSSSLDVSTDAQFPSLVLIDGFIQ 139
T P+RK E +++T + +SQ I P R + +L + + LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDS----VRLVFVDG--- 91
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDL 192
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ------------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSV 137
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV
Sbjct: 138 THIAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL-- 192
Query: 253 NDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTG 308
ND ++ + + + ++H L + S + AH TA + + G
Sbjct: 193 NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LG 249
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
G + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 250 GAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSD 307
Query: 367 SLGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 308 K-GRAVFNGLINV 319
>gi|422973778|ref|ZP_16975946.1| FeS cluster assembly protein sufD [Escherichia coli TA124]
gi|371596627|gb|EHN85464.1| FeS cluster assembly protein sufD [Escherichia coli TA124]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS-----SLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I S +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPHQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|168239253|ref|ZP_02664311.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737662|ref|YP_002114387.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|194713164|gb|ACF92385.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197288008|gb|EDY27395.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 146/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGVSRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTKPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VDS +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDSDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|421853149|ref|ZP_16285828.1| iron-sulfur assembly protein SufD [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478609|dbj|GAB31031.1| iron-sulfur assembly protein SufD [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 427
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 132/323 (40%), Gaps = 44/323 (13%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP------ITRPSSSLD---VSTDA- 126
R ++ LL T P R E +++T + + + Q + S LD DA
Sbjct: 27 RQAAIGALLRTGLPDRHVEAWKYTSLRPLSAQEFQAPPAQYDAAQAKSLLDNLLSQHDAV 86
Query: 127 -QFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---DLF 181
P +V ++G F+++ LS LP+GV V + S+ Q D
Sbjct: 87 QALPRIVFVNGRFVKD----LSLLPEGVDVSFF---------SQNSLTSDVQASPDRDPL 133
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N D +++V G + L L V G S +PR V++EEG +
Sbjct: 134 VALNTALVDDGAILHVAKGADA-GRVLLISLGVAGDTAIS-----FHPRHSVVLEEGAHL 187
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
++ G Y+ N V EV +G+ K+ H+ LQ + A + T V+ Y
Sbjct: 188 ALLSL---SAGVGPYFHNPVTEVTVGESAKLYHTTLQTEGPQAIALATTYVQVAGHGVYN 244
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 359
+ G LSRH VH + P + ++ L Q D+ S ++ H C RQ
Sbjct: 245 SFALGLGSLLSRHEVHARLNAPHAQLHVNGAQNLAEHQVGDITS--VITHAASDCISRQT 302
Query: 360 HKCIV-AHSLGQAVFDGNVKVNR 381
+ ++ H+ G VF G V V +
Sbjct: 303 VRNVLDGHARG--VFQGKVLVEQ 323
>gi|424881755|ref|ZP_18305387.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WU95]
gi|392518118|gb|EIW42850.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 424
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 137/337 (40%), Gaps = 42/337 (12%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ + LP + LRD L P+R+ E + +TD + T
Sbjct: 15 ALIEAFNNEIGELPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------T 68
Query: 115 RPSSSLDVSTDAQFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVS-------D 162
P + D ++A P L+DG IQ + D V LG+S D
Sbjct: 69 LPLQAGDAGSNALAP---LVDGSTVLPVIQGRS-------DQKAVAGDLGISAYSEHLLD 118
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
G + + D ING D VI VP ++E+P+ ++++ GG V ++
Sbjct: 119 G---SAAGGLDALGSDDAVGRINGSFVRDGYVIDVPDNTELEDPLEIQFIHA-GGQVHTR 174
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
LP++ V + +IE + G D + V ++V+G+G ++ LQ Q
Sbjct: 175 -LPVAFGAAV-------KATVIERHLTVTG-DAALVSHVSDIVVGEGTELTWIILQQQGG 225
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
H+ + + L ++ GGKL R +H++ G + L +LL D D
Sbjct: 226 EDTHLGQIRIDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGGDTHTD 285
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ L D P ++ + +V + VF G ++V
Sbjct: 286 VTMVLGHDVPNTGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|170680131|ref|YP_001743573.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SMS-3-5]
gi|170517849|gb|ACB16027.1| FeS assembly protein SufD [Escherichia coli SMS-3-5]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +S+ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSRFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|317504204|ref|ZP_07962198.1| ABC superfamily ATP binding cassette transporter permease, partial
[Prevotella salivae DSM 15606]
gi|315664693|gb|EFV04366.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella salivae DSM 15606]
Length = 318
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 140/322 (43%), Gaps = 34/322 (10%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
I L + D++ S+ PL +RD + + +P+RK E +++TD + + +
Sbjct: 8 IDLYQEQSDAIKRHSAE-----PLNAVRDRAFNDFKAQGFPTRKVERYKYTDMAALFAPN 62
Query: 110 I-QPITRPSSSLD--VSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
+ R + +D + P+L +I+ L ++LP+GV + SL V+
Sbjct: 63 YGLNLNRLAIPVDPYEAFKCDVPNLSTSLYFIINDTFYTKMLPSAHLPEGVIIDSLCHVA 122
Query: 162 DGIMKRVSDFISEFQCG------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVE 215
DFI+++ D ++N M A D ++YVP K + PI + +++
Sbjct: 123 ----TEKPDFIAKYYAKLANTQEDGITALNTMLAQDGLLVYVPKNVKTDRPI--QVINML 176
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRH 274
+VD + N RV++++E+ E + F +D + + V+EV + + +
Sbjct: 177 RADVDL----MVNRRVLIIMEQNAEAKFL--FCDHAADDRRFLSTQVIEVYVDEYAHLEL 230
Query: 275 SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHL 334
+ L+ + + Q+ S ++ ++R+ + + G E +
Sbjct: 231 NCLEETHFKNTRVSNVYIEQQANSRVNHNVITLHNGVTRNRLDLVFKGEGAECHCNG--C 288
Query: 335 LVSDQTQDLHSRLLLDHPRGYC 356
+V+D+ Q + + L+DH +C
Sbjct: 289 VVADKQQHVDNNTLIDHQVPHC 310
>gi|167551663|ref|ZP_02345417.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205323531|gb|EDZ11370.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 147/341 (43%), Gaps = 46/341 (13%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQI- 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 -QPITRPSSSLD-VSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLLGV 160
Q +T ++ D ++ LV +DG F+ QNS ++S V
Sbjct: 64 QQCVTISAAQRDALALQIDAVRLVFVDGRFMPELSDSTQNSGFDVS-------------V 110
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
D + E +F + A + I V + P+ L +++ VD
Sbjct: 111 RDERQTLAAPVQPE-----VFLHLTESLAQCVTYIQVRRNQRPTMPLLLMHIT---QGVD 162
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+L ++ R + + EG E +IE +V ++ + L + + ++RH L +
Sbjct: 163 GDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLAFE 221
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ ++ H + T + G + RH+ Q G + L+S + V ++
Sbjct: 222 NASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEV 281
Query: 341 QDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 282 CD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|423223490|ref|ZP_17209959.1| FeS assembly protein SufD [Bacteroides cellulosilyticus CL02T12C19]
gi|392638370|gb|EIY32211.1| FeS assembly protein SufD [Bacteroides cellulosilyticus CL02T12C19]
Length = 447
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++ + V + + D + N A D ++Y+
Sbjct: 101 NKALPASHLPEGVIFGSLKEMAAKHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYI 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P +E PI L +++ G+V+ + N RV++++E+G + ++ V D
Sbjct: 161 PKNVALERPIQL--VNILRGDVNF----LVNRRVLIVLEDGAQARML---VCDHAMDAVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV +G+ L+ + I V+QE S L ++ SR+
Sbjct: 212 FLATQVIEVFVGENAVFDLYELEETHTSTVRISNMYVKQEANSNVLLNGMTLHNGTSRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIADKNQHVDNNTSIDHAVPNC 310
>gi|374595900|ref|ZP_09668904.1| FeS assembly protein SufD [Gillisia limnaea DSM 15749]
gi|373870539|gb|EHQ02537.1| FeS assembly protein SufD [Gillisia limnaea DSM 15749]
Length = 438
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 146/341 (42%), Gaps = 25/341 (7%)
Query: 56 LEDSLPSSSSSLPQPLPL----QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + L +LR S + +PS+K+E +++T + +
Sbjct: 3 LKDKLISSFLAFEEAFDLNSDIHELRTRSLKEFEQLGFPSKKEEAWKYTSLNSVLKPDYS 62
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLS--NLPDGVYVGSLLGVSD 162
+ +++ D +LV IDG I +S L+ + + D + S L S
Sbjct: 63 VFPKKEDTIEYRDIKKYLIHDIDTYNLVFIDG-IYSSHLSQTTHDKIDVCLMSSALSKSK 121
Query: 163 G--IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
++ + I + G F +N + + I++ + PI + ++ GN
Sbjct: 122 YKPVIDNYFNKIVSKENG--FTPLNTAFSKEGAFIHIHKNQLADKPIQI--VNFATGN-- 175
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ + PR +++V+E V IIE N NSV E+ K V + +QN
Sbjct: 176 -EAALMIQPRNLIVVDENAHVQIIERHQSLTNNPV-LTNSVTEIYAAKRAIVDYYKIQND 233
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
A+ I T V Q+ S + S GGKL+R+N++ Q G +++ L ++ Q
Sbjct: 234 RDTASLIDNTFVEQQEQSNCSMHTFSFGGKLTRNNLNFYQRGEHSDSTLKGITIIEDKQH 293
Query: 341 QDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K I A + VF+G V V++
Sbjct: 294 VDHNTLVHHISPNCESHQDYKGIFAEN-STGVFNGKVLVDK 333
>gi|301326555|ref|ZP_07219896.1| FeS assembly protein SufD [Escherichia coli MS 78-1]
gi|300846775|gb|EFK74535.1| FeS assembly protein SufD [Escherichia coli MS 78-1]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V ++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEGNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|417365837|ref|ZP_12138328.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353593374|gb|EHC51141.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
Length = 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVMYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|300938996|ref|ZP_07153694.1| FeS assembly protein SufD [Escherichia coli MS 21-1]
gi|300456099|gb|EFK19592.1| FeS assembly protein SufD [Escherichia coli MS 21-1]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAHSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPVKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|300904532|ref|ZP_07122371.1| FeS assembly protein SufD [Escherichia coli MS 84-1]
gi|301303196|ref|ZP_07209322.1| FeS assembly protein SufD [Escherichia coli MS 124-1]
gi|415861413|ref|ZP_11535079.1| FeS assembly protein SufD [Escherichia coli MS 85-1]
gi|300403526|gb|EFJ87064.1| FeS assembly protein SufD [Escherichia coli MS 84-1]
gi|300841605|gb|EFK69365.1| FeS assembly protein SufD [Escherichia coli MS 124-1]
gi|315257516|gb|EFU37484.1| FeS assembly protein SufD [Escherichia coli MS 85-1]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGPRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|352096059|ref|ZP_08957006.1| SufBD protein [Synechococcus sp. WH 8016]
gi|351677415|gb|EHA60564.1| SufBD protein [Synechococcus sp. WH 8016]
Length = 410
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 29/324 (8%)
Query: 65 SSLPQPL-PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS 123
+ LP P L+ ++ L +P+R+ E +R TD + +++ + ++ D S
Sbjct: 9 TQLPAPAGTLEPVQRRGRLALSEQSFPTRRQEAWRLTDLTRLEA--LFQLSLADQRSDSS 66
Query: 124 TDAQFPSL------VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC 177
+ +P + ++IDG L LP+G+ SLL ++ + + + +S +C
Sbjct: 67 SADSWPPVPEQALRLVIDG--SQDPLQGVALPEGI---SLLEGAE-LEQALGHTLSRCRC 120
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
W + ++ + KV P+ L ++ D+ +P RV++LVEE
Sbjct: 121 AS-DWPVELNHGVSQQILALRIRGKVP-PVELVMVAS-----DAMLVPT---RVLLLVEE 170
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
E+ ++ V +G + + +LE+ +G+ KV H L A + AV QET
Sbjct: 171 KAELEFLQ-VVSAKGQAAH--SHLLEIHLGQESKVNHGLLALGDGGEALLANLAVEQETR 227
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR 357
S Y LV VS G R V Q+ + + +D+ +H+ + + P G
Sbjct: 228 SHYSLVSVSQGWSFGRLEPSVVQVDGQASASIHGLSVTAADEQFAVHTAVRFEGPEGTLD 287
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
Q+ K I A ++F+G ++V R
Sbjct: 288 QVQKTIAADR-SHSIFNGAIQVPR 310
>gi|238753645|ref|ZP_04615007.1| hypothetical protein yruck0001_13760 [Yersinia ruckeri ATCC 29473]
gi|238708197|gb|EEQ00553.1| hypothetical protein yruck0001_13760 [Yersinia ruckeri ATCC 29473]
Length = 410
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV-EGGNVDSKKLPISNPRVVVLVEE 237
++F + A ++ +I + AG P+YL ++S + G V + S+ R +++E
Sbjct: 111 EVFLHLTESLAQEVTLIRLAAGQHGNKPLYLLHISSGDAGEV----VNTSHYRHHLVLEA 166
Query: 238 GGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQN---QSLNAAHIKWTAVR 293
+ ++E +V ND ++ + L V +G ++ H L QS + AH R
Sbjct: 167 NTQADVVEHYVSL--NDLPHFTGARLTVSVGDNAQLTHCKLAFETPQSDHFAHNDIVMGR 224
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
AS + G L+RH+ Q G ++S L V + D +R L+H +
Sbjct: 225 DARASSTSFL---LGAGLTRHHTSTQLNGEGATLSINSLLLPVGREVCD--TRTYLEHNK 279
Query: 354 GYC--RQLHKCIVAHSLGQAVFDGNVKV 379
GYC RQLHK +V G+AVF+G +KV
Sbjct: 280 GYCQSRQLHKTVVRER-GKAVFNGMIKV 306
>gi|301026911|ref|ZP_07190307.1| FeS assembly protein SufD [Escherichia coli MS 69-1]
gi|419921015|ref|ZP_14439111.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KD2]
gi|432489290|ref|ZP_19731171.1| FeS cluster assembly protein sufD [Escherichia coli KTE213]
gi|432839305|ref|ZP_20072792.1| FeS cluster assembly protein sufD [Escherichia coli KTE140]
gi|433203258|ref|ZP_20387039.1| FeS cluster assembly protein sufD [Escherichia coli KTE95]
gi|300395258|gb|EFJ78796.1| FeS assembly protein SufD [Escherichia coli MS 69-1]
gi|388383325|gb|EIL45104.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli KD2]
gi|431021326|gb|ELD34649.1| FeS cluster assembly protein sufD [Escherichia coli KTE213]
gi|431389457|gb|ELG73168.1| FeS cluster assembly protein sufD [Escherichia coli KTE140]
gi|431722326|gb|ELJ86292.1| FeS cluster assembly protein sufD [Escherichia coli KTE95]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAHSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPVKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|312966834|ref|ZP_07781052.1| feS assembly protein SufD [Escherichia coli 2362-75]
gi|419039577|ref|ZP_13586619.1| feS assembly protein SufD [Escherichia coli DEC2E]
gi|312288298|gb|EFR16200.1| feS assembly protein SufD [Escherichia coli 2362-75]
gi|377894407|gb|EHU58828.1| feS assembly protein SufD [Escherichia coli DEC2E]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 138/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG +
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
V
Sbjct: 316 LTNV 319
>gi|197263874|ref|ZP_03163948.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197242129|gb|EDY24749.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 147/349 (42%), Gaps = 62/349 (17%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLS------NLPDGV 152
Q S++ L + DA LV +DG F+ QNS ++S L V
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVSVRDERQTLAASV 121
Query: 153 YVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYL 212
+ L +++ + QC + I V + P+ L ++
Sbjct: 122 HPEVFLHLTESLA----------QC--------------VTYIQVRRNQRPTRPLLLMHI 157
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+ VD +L ++ R + + EG E +IE +V ++ + L + + ++
Sbjct: 158 T---QGVDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQL 213
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 332
RH L ++ ++ H + T + G + RH+ Q G + L+S
Sbjct: 214 RHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSL 273
Query: 333 HLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ V ++ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 274 AMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|386704588|ref|YP_006168435.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli P12b]
gi|383102756|gb|AFG40265.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli P12b]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L +++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|334122242|ref|ZP_08496283.1| FeS assembly protein SufD [Enterobacter hormaechei ATCC 49162]
gi|333392353|gb|EGK63457.1| FeS assembly protein SufD [Enterobacter hormaechei ATCC 49162]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 150/341 (43%), Gaps = 46/341 (13%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTS-------M 104
LP+SS++L Q L + + S Q +L P+RK E +++T +
Sbjct: 4 LPNSSNALQQWHRLFETQGQSRSEQAQHHLQQMLRLGLPTRKHENWKYTPLDGLLNGEFV 63
Query: 105 IKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ +Q+ P R +L +S DA LV +DG + + L D V G I
Sbjct: 64 TRLAQVSPGQR--DALALSVDA--VRLVFVDGQFR------AELSDSVQES---GFDIAI 110
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS--VEGGNVDSK 222
+ Q ++F + + + I V + P+ L +++ VEG +++
Sbjct: 111 NDERQSLTAPVQP-EVFLHLTESLSQSVTHIRVKRNQRPAKPLLLMHITQGVEGDEINT- 168
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQS 281
++ R + + EG E +IE +V ND ++ S L + + ++ H L ++
Sbjct: 169 ----AHYRHHLELAEGAEATVIEHYVSL--NDIRHFTGSRLTMNVAANAQLHHIKLAFEN 222
Query: 282 LNAAHIKWTAVR-QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ H + + A+ Y GG + RHN Q G +T ++S + V +
Sbjct: 223 PLSHHFAHNDILLGQDAAAYSH-SFLLGGAVLRHNTSTQLNGENTTLRINSLAMPVKAEV 281
Query: 341 QDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 282 CD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|293409994|ref|ZP_06653570.1| FeS assembly protein SufD [Escherichia coli B354]
gi|291470462|gb|EFF12946.1| FeS assembly protein SufD [Escherichia coli B354]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAHSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPVKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|24113070|ref|NP_707580.1| cysteine desulfurase [Shigella flexneri 2a str. 301]
gi|30063195|ref|NP_837366.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 2a str. 2457T]
gi|384543332|ref|YP_005727395.1| putative Selenocysteine lyase [Shigella flexneri 2002017]
gi|415856750|ref|ZP_11531629.1| feS assembly protein SufD [Shigella flexneri 2a str. 2457T]
gi|417707644|ref|ZP_12356689.1| feS assembly protein SufD [Shigella flexneri VA-6]
gi|417723162|ref|ZP_12371978.1| feS assembly protein SufD [Shigella flexneri K-304]
gi|417728474|ref|ZP_12377189.1| feS assembly protein SufD [Shigella flexneri K-671]
gi|417733625|ref|ZP_12382282.1| feS assembly protein SufD [Shigella flexneri 2747-71]
gi|417738632|ref|ZP_12387219.1| feS assembly protein SufD [Shigella flexneri 4343-70]
gi|417743394|ref|ZP_12391930.1| feS assembly protein SufD [Shigella flexneri 2930-71]
gi|417827884|ref|ZP_12474447.1| feS assembly protein SufD [Shigella flexneri J1713]
gi|418256034|ref|ZP_12880250.1| feS assembly protein SufD [Shigella flexneri 6603-63]
gi|420320244|ref|ZP_14822082.1| feS assembly protein SufD [Shigella flexneri 2850-71]
gi|420331117|ref|ZP_14832792.1| feS assembly protein SufD [Shigella flexneri K-1770]
gi|420341891|ref|ZP_14843383.1| feS assembly protein SufD [Shigella flexneri K-404]
gi|420372539|ref|ZP_14872792.1| feS assembly protein SufD [Shigella flexneri 1235-66]
gi|24052043|gb|AAN43287.1| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30041447|gb|AAP17175.1| hypothetical protein S1843 [Shigella flexneri 2a str. 2457T]
gi|281601118|gb|ADA74102.1| putative Selenocysteine lyase [Shigella flexneri 2002017]
gi|313648963|gb|EFS13400.1| feS assembly protein SufD [Shigella flexneri 2a str. 2457T]
gi|332757001|gb|EGJ87344.1| feS assembly protein SufD [Shigella flexneri 4343-70]
gi|332757784|gb|EGJ88113.1| feS assembly protein SufD [Shigella flexneri 2747-71]
gi|332758522|gb|EGJ88843.1| feS assembly protein SufD [Shigella flexneri K-671]
gi|332766887|gb|EGJ97087.1| feS assembly protein SufD [Shigella flexneri 2930-71]
gi|333003808|gb|EGK23344.1| feS assembly protein SufD [Shigella flexneri VA-6]
gi|333017958|gb|EGK37263.1| feS assembly protein SufD [Shigella flexneri K-304]
gi|335575717|gb|EGM61994.1| feS assembly protein SufD [Shigella flexneri J1713]
gi|391251284|gb|EIQ10500.1| feS assembly protein SufD [Shigella flexneri 2850-71]
gi|391254608|gb|EIQ13769.1| feS assembly protein SufD [Shigella flexneri K-1770]
gi|391268698|gb|EIQ27619.1| feS assembly protein SufD [Shigella flexneri K-404]
gi|391318150|gb|EIQ75345.1| feS assembly protein SufD [Shigella flexneri 1235-66]
gi|397898317|gb|EJL14706.1| feS assembly protein SufD [Shigella flexneri 6603-63]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
I+ S +S LPD + L +++ + + V+
Sbjct: 97 LSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L +++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|403058994|ref|YP_006647211.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806320|gb|AFR03958.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 448
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I++ AG + E P+YL ++S + L + R + VE G IIE +V +
Sbjct: 159 LIHLAAGQQAEKPLYLLHIS----SSQEAALNTVHHRHHLNVERGASAEIIEHYVSLD-E 213
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQS---LNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + L V + +V H L ++ + AH R + + G
Sbjct: 214 HAHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHNDLVLARDARVRSHSFL---LGAG 270
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVAHSL 368
L+RHN Q G T ++S L V + D +R L+H +GY RQLHK IV +
Sbjct: 271 LTRHNTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV-NDR 327
Query: 369 GQAVFDGNVKV 379
+AVF+G +KV
Sbjct: 328 ARAVFNGMIKV 338
>gi|391227906|ref|ZP_10264113.1| FeS assembly protein SufD [Opitutaceae bacterium TAV1]
gi|391223399|gb|EIQ01819.1| FeS assembly protein SufD [Opitutaceae bacterium TAV1]
Length = 450
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 134/305 (43%), Gaps = 28/305 (9%)
Query: 88 PWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA-QFPSLVLIDGFIQNSALNLS 146
P+P R E +RF+ T +K + + P D +T+ F + I ++ ++
Sbjct: 60 PFPGRTAETWRFSST--LKEADLSGFDLPE---DPATNIPNFSTFEHAAEIIFSNRQLVA 114
Query: 147 NLP---DGVYVGSLLGVSDGIMKRVSDFISE-FQ------CGDLFWSINGMGAPDLGVIY 196
P D V G + D ++ +D + FQ + F ++N ++Y
Sbjct: 115 RSPLSSDLVARGVIFCPLDEALRNHADIVQRYFQKLPANLGSEKFVALNTAFTAAGALLY 174
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY 256
VP G +V P L++ ++ G D+K + P +V++E+ ++E F+ E N +
Sbjct: 175 VPKGVEVATPFVLQH-TLSG---DNKAV---FPHTLVILEDQARATLVEFFISAEANARH 227
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
A+ V ++ G G ++ + Q S + ++ E + + V GG+ +RH
Sbjct: 228 LASGVNDLHAGPGAQLTYVGAQAWSGQTLAFQSNSIVAERDARVLSLNVHLGGRRARHES 287
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFD 374
H + LGP +E+ L ++D +++ R L H PR L+K + + + +F
Sbjct: 288 HSRLLGPGAHSEM--LALTIADGSREFDQRTLQTHAAPRTSSNLLYKNALLDT-AKTIFS 344
Query: 375 GNVKV 379
G + V
Sbjct: 345 GLIIV 349
>gi|373849837|ref|ZP_09592638.1| FeS assembly protein SufD [Opitutaceae bacterium TAV5]
gi|372476002|gb|EHP36011.1| FeS assembly protein SufD [Opitutaceae bacterium TAV5]
Length = 450
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 134/305 (43%), Gaps = 28/305 (9%)
Query: 88 PWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA-QFPSLVLIDGFIQNSALNLS 146
P+P R E +RF+ T +K + + P D +T+ F + I ++ ++
Sbjct: 60 PFPGRTAETWRFSST--LKEADLSGFDLPE---DPATNIPNFSTFEHAAEIIFSNRQLVA 114
Query: 147 NLP---DGVYVGSLLGVSDGIMKRVSDFISE-FQ------CGDLFWSINGMGAPDLGVIY 196
P D V G + D ++ +D + FQ + F ++N ++Y
Sbjct: 115 RSPLSSDLVARGVIFCPLDEALRNHADIVQRYFQKLPANLGSEKFVALNTAFTAAGALLY 174
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY 256
VP G +V P L++ ++ G D+K + P +V++E+ ++E F+ E N +
Sbjct: 175 VPKGVEVATPFVLQH-TLSG---DNKAV---FPHTLVILEDQARATLVEFFISAEANARH 227
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
A+ V ++ G G ++ + Q S + ++ E + + V GG+ +RH
Sbjct: 228 LASGVNDLHAGPGAQLTYVGAQAWSGQTLAFQSNSIVAERDARVLSLNVHLGGRRARHES 287
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFD 374
H + LGP +E+ L ++D +++ R L H PR L+K + + + +F
Sbjct: 288 HSRLLGPGAHSEM--LALTIADGSREFDQRTLQTHAAPRTSSNLLYKNALLDT-AKTIFS 344
Query: 375 GNVKV 379
G + V
Sbjct: 345 GLIIV 349
>gi|416897596|ref|ZP_11927244.1| feS assembly protein SufD [Escherichia coli STEC_7v]
gi|417115934|ref|ZP_11967070.1| FeS assembly protein SufD [Escherichia coli 1.2741]
gi|422798966|ref|ZP_16847465.1| FeS assembly protein SufD [Escherichia coli M863]
gi|323968448|gb|EGB63854.1| FeS assembly protein SufD [Escherichia coli M863]
gi|327252798|gb|EGE64452.1| feS assembly protein SufD [Escherichia coli STEC_7v]
gi|386141353|gb|EIG82505.1| FeS assembly protein SufD [Escherichia coli 1.2741]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQTEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLVMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|227111736|ref|ZP_03825392.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 448
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I++ AG + E P+YL ++S + L + R + VE G IIE +V +
Sbjct: 159 LIHLAAGQQAEKPLYLLHIS----SSQEAALNTVHHRHHLNVERGASAEIIEHYVSLD-E 213
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQS---LNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + L V + +V H L ++ + AH R + + G
Sbjct: 214 HAHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHNDLVLARDARVRSHSFL---LGAG 270
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVAHSL 368
L+RHN Q G T ++S L V + D +R L+H +GY RQLHK IV +
Sbjct: 271 LTRHNTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV-NDR 327
Query: 369 GQAVFDGNVKV 379
+AVF+G +KV
Sbjct: 328 ARAVFNGMIKV 338
>gi|40889898|pdb|1VH4|A Chain A, Crystal Structure Of A Stabilizer Of Iron Transporter
gi|40889899|pdb|1VH4|B Chain B, Crystal Structure Of A Stabilizer Of Iron Transporter
Length = 435
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 155/353 (43%), Gaps = 60/353 (16%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSS--------SQTLLSTPWPSRKDEPFRFTDTSMIK 106
SL LP+SS++L Q L + + Q LL T P+RK E +++T +
Sbjct: 1 SLMAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLI 60
Query: 107 SSQ-------IQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG 159
+SQ I P R + +L + + LV +DG YV +L
Sbjct: 61 NSQFVSIAGEISPQQRDALALTLDS----VRLVFVDG---------------RYVPALSD 101
Query: 160 VSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYL 212
++G VS I++ + G ++F + A + I V G + P+ L ++
Sbjct: 102 ATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHI 159
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGK 271
+ V +++ ++ R + + EG E +IE FV ND ++ + + +
Sbjct: 160 T---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGARFTINVAANAH 214
Query: 272 VRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
++H L + S + AH TA + + GG + RHN Q G ++
Sbjct: 215 LQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LGGAVLRHNTSTQLNGENSTLR 271
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G + V
Sbjct: 272 INSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNGLINV 321
>gi|16760535|ref|NP_456152.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29141704|ref|NP_805046.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213428570|ref|ZP_03361320.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213649927|ref|ZP_03379980.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213852801|ref|ZP_03382333.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289825918|ref|ZP_06545077.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|378959406|ref|YP_005216892.1| FeS cluster assembly protein sufD [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|25513159|pir||AH0702 conserved hypothetical protein STY1751 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502831|emb|CAD01993.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137332|gb|AAO68895.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374353278|gb|AEZ45039.1| FeS cluster assembly protein sufD [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 147/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPL----QKLRDSSS----QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++R + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGEIRTEQARQHFQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VDS +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDSDELNTAHYRHHLTLAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|152970687|ref|YP_001335796.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|262044176|ref|ZP_06017248.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012604|ref|ZP_08307439.1| FeS assembly protein SufD [Klebsiella sp. MS 92-3]
gi|365137840|ref|ZP_09344550.1| FeS cluster assembly protein sufD [Klebsiella sp. 4_1_44FAA]
gi|378979282|ref|YP_005227423.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|386035272|ref|YP_005955185.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae KCTC 2242]
gi|419975142|ref|ZP_14490555.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419979595|ref|ZP_14494885.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419984168|ref|ZP_14499316.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419991852|ref|ZP_14506814.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419998271|ref|ZP_14513060.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420003263|ref|ZP_14517910.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420008760|ref|ZP_14523248.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420015157|ref|ZP_14529459.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420020458|ref|ZP_14534645.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420026148|ref|ZP_14540152.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420031994|ref|ZP_14545812.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420037828|ref|ZP_14551480.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420043416|ref|ZP_14556904.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420049363|ref|ZP_14562671.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420055031|ref|ZP_14568201.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420060501|ref|ZP_14573500.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420066575|ref|ZP_14579374.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420071975|ref|ZP_14584617.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420078299|ref|ZP_14590758.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420081664|ref|ZP_14593970.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|421908271|ref|ZP_16338119.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421919150|ref|ZP_16348658.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424831069|ref|ZP_18255797.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|428148059|ref|ZP_18995954.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428941712|ref|ZP_19014746.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae VA360]
gi|150955536|gb|ABR77566.1| required for stability of iron-sulfur component of FhuF [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259038473|gb|EEW39672.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328533763|gb|EGF60452.1| FeS assembly protein SufD [Klebsiella sp. MS 92-3]
gi|339762400|gb|AEJ98620.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae KCTC 2242]
gi|363655732|gb|EHL94539.1| FeS cluster assembly protein sufD [Klebsiella sp. 4_1_44FAA]
gi|364518693|gb|AEW61821.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|397343727|gb|EJJ36869.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397348416|gb|EJJ41516.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354685|gb|EJJ47724.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397360867|gb|EJJ53538.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397362627|gb|EJJ55275.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397370247|gb|EJJ62838.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397376800|gb|EJJ69047.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397382951|gb|EJJ75105.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397387789|gb|EJJ79796.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397395774|gb|EJJ87474.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397398897|gb|EJJ90555.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397405067|gb|EJJ96546.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397413296|gb|EJK04513.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397414190|gb|EJK05392.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397422296|gb|EJK13273.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397429463|gb|EJK20177.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397433550|gb|EJK24197.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397439737|gb|EJK30170.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397445064|gb|EJK35319.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397453009|gb|EJK43073.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|410117835|emb|CCM80744.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410118547|emb|CCM91283.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|414708502|emb|CCN30206.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|426299976|gb|EKV62283.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae VA360]
gi|427541993|emb|CCM92092.1| Iron-sulfur cluster assembly protein SufD [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 424
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 128/307 (41%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q LL P+RK E +++T + + + S S + P LV IDG
Sbjct: 34 QQLLRLGLPTRKHEDWKYTPLDALLNGRFVADEGASLSAEQRDALALPLDAWRLVFIDGR 93
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
L D + + D + + D + ++F + A + I V
Sbjct: 94 YH------PQLSDDLAASGVEVSVDNQRQHLPDALQP----EVFLHLTESLAQTVTRIRV 143
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P +++ P+ L +++ + L ++ R + +E G E I+E ++ ++
Sbjct: 144 PRNRRLDKPLLLMHIT---SGLAGDALNTAHYRHHLALESGAEATIVEHYLSL-NEQPHF 199
Query: 258 ANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
L + + ++H ++ +S + AH R +A + GG++ RH
Sbjct: 200 TGGRLTMTVADNAHLQHIKLAFENARSYHFAHNDLLLGRDASAFSSSFL---LGGQVLRH 256
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
+ G ++ L+S + V ++ D SR LDH GYC RQLHK IV+ G+AV
Sbjct: 257 QTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVSDK-GRAV 313
Query: 373 FDGNVKV 379
F+G + V
Sbjct: 314 FNGLINV 320
>gi|419941760|ref|ZP_14458420.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 75]
gi|388399773|gb|EIL60552.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 75]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 52/313 (16%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQ-------IQPITRPSSSLDVSTDAQFPSLVLIDGFIQ 139
T P+RK E +++T + +SQ I P R + +L + + LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDS----VRLVFVDG--- 91
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDL 192
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ------------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSV 137
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV
Sbjct: 138 THIAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL-- 192
Query: 253 NDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTG 308
ND ++ + + + ++H L + S + AH TA + + G
Sbjct: 193 NDARHFTRARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LG 249
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
G + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 250 GAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSD 307
Query: 367 SLGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 308 K-GRAVFNGLINV 319
>gi|417628796|ref|ZP_12279036.1| feS assembly protein SufD [Escherichia coli STEC_MHI813]
gi|345374010|gb|EGX05963.1| feS assembly protein SufD [Escherichia coli STEC_MHI813]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSILGEVSPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|189501697|ref|YP_001957414.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497138|gb|ACE05685.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
Length = 439
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 143/342 (41%), Gaps = 33/342 (9%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---- 111
L+++ SSL QK++ + +T P K E ++ T + + S +
Sbjct: 10 LQEAFSRHISSLSTTHDWQKVQQEAYRTFQKLGLPHAKTEAYKNTPITSVLSEKFNLSDV 69
Query: 112 PIT--RPSSSLDVSTDAQFPS--LVLIDGFI--QNSALNLSNLPDGVYV--GSLLGVSDG 163
PI PS ++ F S +VL++G I + + +NL + VY + D
Sbjct: 70 PIALDEPSEEIEALLQQSFDSYPIVLVNGMISKRYTPINLLHPSFQVYTFDEAYTQHPDL 129
Query: 164 IMKRVSDFISEFQCG----DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+MK QC D+F IN +IY+P +N + K L +
Sbjct: 130 LMKHFD------QCASDKLDIFTFINTALFKTGIMIYIP-----DNVVLDKTLHIYNITD 178
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + IS PR++++ + ++ II + N+ + N+V ++++G ++ LQ
Sbjct: 179 AATQKAISYPRLLIVTGKNSQLSIINSWHTLGENEGF-TNAVTDIIVGPYTQLDCYTLQT 237
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
Q NA I Q S S G L R+N+H+ E + + L +
Sbjct: 238 QLGNACQINNIHYYQAEHSVVNNYAFSWDGMLIRNNLHIVIQASHAEANMYGLYCL--NN 295
Query: 340 TQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
TQ + + L+DH P +L+K I+ + VF+G + V
Sbjct: 296 TQHIDNHTLVDHQQPHTASNELYKGIIGGN-ATGVFNGRIYV 336
>gi|432718795|ref|ZP_19953764.1| FeS cluster assembly protein sufD [Escherichia coli KTE9]
gi|431262607|gb|ELF54596.1| FeS cluster assembly protein sufD [Escherichia coli KTE9]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|417326670|ref|ZP_12112297.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
gi|353572644|gb|EHC36226.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTELARQHFQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQFATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQALAAPVQPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHFKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|326794501|ref|YP_004312321.1| FeS assembly protein SufD [Marinomonas mediterranea MMB-1]
gi|326545265|gb|ADZ90485.1| FeS assembly protein SufD [Marinomonas mediterranea MMB-1]
Length = 425
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 38/331 (11%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
+ L + L +R + L +T WP+RK E +R+T ++ + R +S+ +
Sbjct: 16 TELAEQQWLAPIRAKAISQLKNTRWPNRKTEAWRYT--------PLRAVERTLASVK-NA 66
Query: 125 DAQFPSLV--LIDG-------FIQ---NSALNLSNLPDG--VYVGSLLGVSDGIMKRVSD 170
DA LV +I+G F+ + AL+ LP G + +GS L D ++ +S+
Sbjct: 67 DAAEKGLVPAVIEGLSAIEVVFVNGEFSEALSTQVLPAGLSIVLGSQLDNRDDLLDALSE 126
Query: 171 FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
E LF +N ++ I V G ++ PI + LS + S+ +
Sbjct: 127 IKPERH---LFGMLNDALVQEVVWIKVAQGVSIDAPIRITNLSSQAAE--------SHVK 175
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
V VEEG +V ++ E G G + E + K ++ H Q+ + +
Sbjct: 176 AFVSVEEGAQVTVL-EMAGSNGQTL--STGFTEYDLAKDSRLEHYRFALQTDDNVSVGGC 232
Query: 291 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 350
R A+ + G L R + + G + +L++ +LL ++ DLH+ +
Sbjct: 233 HFRLGEAAQLNSNIIGFGSDLQRLDTDIIYAGENANAKLNAVYLLDGNELFDLHATVEHA 292
Query: 351 HPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
P + + IVA +AVF+G + ++R
Sbjct: 293 VPNCVTEENIRGIVADR-ARAVFNGRIHIHR 322
>gi|241895312|ref|ZP_04782608.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella paramesenteroides ATCC 33313]
gi|241871286|gb|EER75037.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella paramesenteroides ATCC 33313]
Length = 469
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G + PI Y + G + R +++V+EGG V +E ++
Sbjct: 190 LYVPKGVHADVPI-QSYFRINAGRTGQFE------RTLIIVDEGGSVNYVEGCTAPNYSE 242
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
+V+EV + +GG R++ +QN S N ++ R E A+ E V+ + G K++
Sbjct: 243 DSLHAAVVEVFVKQGGYCRYTTIQNWSTNVYSLETKRARAEAAASMEWVDGNLGSKVTMK 302
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
+ +G + S D QD ++++ P + + K I H G+A +
Sbjct: 303 YPSIYLVGRGATGSMLSIAAAGKDMHQDTGAKMIHMAPDTHSTIISKAI-CHDGGRADYR 361
Query: 375 GNVKVNR 381
G VK +
Sbjct: 362 GLVKYTK 368
>gi|16129637|ref|NP_416196.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
str. K-12 substr. MG1655]
gi|170081341|ref|YP_001730661.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli str. K-12 substr. DH10B]
gi|238900896|ref|YP_002926692.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli BW2952]
gi|300951273|ref|ZP_07165122.1| FeS assembly protein SufD [Escherichia coli MS 116-1]
gi|300958562|ref|ZP_07170692.1| FeS assembly protein SufD [Escherichia coli MS 175-1]
gi|301027874|ref|ZP_07191175.1| FeS assembly protein SufD [Escherichia coli MS 196-1]
gi|301647864|ref|ZP_07247646.1| FeS assembly protein SufD [Escherichia coli MS 146-1]
gi|331642279|ref|ZP_08343414.1| FeS assembly protein SufD [Escherichia coli H736]
gi|386280746|ref|ZP_10058410.1| FeS cluster assembly protein sufD [Escherichia sp. 4_1_40B]
gi|386595507|ref|YP_006091907.1| FeS assembly protein SufD [Escherichia coli DH1]
gi|387612170|ref|YP_006115286.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli ETEC H10407]
gi|387621399|ref|YP_006129026.1| cysteine desulfurase activator complex subunitSufD [Escherichia
coli DH1]
gi|388477755|ref|YP_489943.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
W3110]
gi|404375047|ref|ZP_10980237.1| FeS cluster assembly protein sufD [Escherichia sp. 1_1_43]
gi|415773556|ref|ZP_11486151.1| feS assembly protein SufD [Escherichia coli 3431]
gi|417261896|ref|ZP_12049384.1| FeS assembly protein SufD [Escherichia coli 2.3916]
gi|417273007|ref|ZP_12060356.1| FeS assembly protein SufD [Escherichia coli 2.4168]
gi|417276941|ref|ZP_12064267.1| FeS assembly protein SufD [Escherichia coli 3.2303]
gi|417292386|ref|ZP_12079667.1| FeS assembly protein SufD [Escherichia coli B41]
gi|417613044|ref|ZP_12263506.1| feS assembly protein SufD [Escherichia coli STEC_EH250]
gi|417618223|ref|ZP_12268644.1| feS assembly protein SufD [Escherichia coli G58-1]
gi|417634588|ref|ZP_12284802.1| feS assembly protein SufD [Escherichia coli STEC_S1191]
gi|417943351|ref|ZP_12586599.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli XH140A]
gi|417974777|ref|ZP_12615578.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli XH001]
gi|418302939|ref|ZP_12914733.1| feS assembly protein SufD [Escherichia coli UMNF18]
gi|418957962|ref|ZP_13509885.1| FeS assembly protein SufD [Escherichia coli J53]
gi|419153774|ref|ZP_13698346.1| feS assembly protein SufD [Escherichia coli DEC6C]
gi|419159166|ref|ZP_13703675.1| feS assembly protein SufD [Escherichia coli DEC6D]
gi|419164387|ref|ZP_13708844.1| feS assembly protein SufD [Escherichia coli DEC6E]
gi|419809823|ref|ZP_14334707.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O32:H37 str. P4]
gi|422766246|ref|ZP_16819973.1| FeS assembly protein SufD [Escherichia coli E1520]
gi|422772443|ref|ZP_16826131.1| FeS assembly protein SufD [Escherichia coli E482]
gi|423704854|ref|ZP_17679277.1| FeS cluster assembly protein sufD [Escherichia coli H730]
gi|425115055|ref|ZP_18516863.1| feS assembly protein SufD [Escherichia coli 8.0566]
gi|425119779|ref|ZP_18521485.1| feS assembly protein SufD [Escherichia coli 8.0569]
gi|425272780|ref|ZP_18664214.1| feS assembly protein SufD [Escherichia coli TW15901]
gi|425283264|ref|ZP_18674325.1| feS assembly protein SufD [Escherichia coli TW00353]
gi|425305222|ref|ZP_18694967.1| feS assembly protein SufD [Escherichia coli N1]
gi|432416896|ref|ZP_19659507.1| FeS cluster assembly protein sufD [Escherichia coli KTE44]
gi|432563874|ref|ZP_19800465.1| FeS cluster assembly protein sufD [Escherichia coli KTE51]
gi|432627267|ref|ZP_19863247.1| FeS cluster assembly protein sufD [Escherichia coli KTE77]
gi|432636903|ref|ZP_19872779.1| FeS cluster assembly protein sufD [Escherichia coli KTE81]
gi|432660914|ref|ZP_19896560.1| FeS cluster assembly protein sufD [Escherichia coli KTE111]
gi|432685468|ref|ZP_19920770.1| FeS cluster assembly protein sufD [Escherichia coli KTE156]
gi|432691617|ref|ZP_19926848.1| FeS cluster assembly protein sufD [Escherichia coli KTE161]
gi|432704433|ref|ZP_19939537.1| FeS cluster assembly protein sufD [Escherichia coli KTE171]
gi|432737170|ref|ZP_19971936.1| FeS cluster assembly protein sufD [Escherichia coli KTE42]
gi|432955115|ref|ZP_20147055.1| FeS cluster assembly protein sufD [Escherichia coli KTE197]
gi|433047958|ref|ZP_20235328.1| FeS cluster assembly protein sufD [Escherichia coli KTE120]
gi|442593362|ref|ZP_21011313.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|450244221|ref|ZP_21900184.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli S17]
gi|3025254|sp|P77689.1|SUFD_ECOLI RecName: Full=FeS cluster assembly protein SufD
gi|224983401|pdb|2ZU0|A Chain A, Crystal Structure Of Sufc-Sufd Complex Involved In The
Iron- Sulfur Cluster Biosynthesis
gi|224983402|pdb|2ZU0|B Chain B, Crystal Structure Of Sufc-Sufd Complex Involved In The
Iron- Sulfur Cluster Biosynthesis
gi|1742765|dbj|BAA15456.1| component of SufBCD complex [Escherichia coli str. K12 substr.
W3110]
gi|1787971|gb|AAC74751.1| component of SufBCD Fe-S cluster assembly scaffold [Escherichia
coli str. K-12 substr. MG1655]
gi|169889176|gb|ACB02883.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|238860170|gb|ACR62168.1| component of SufBCD complex [Escherichia coli BW2952]
gi|260449196|gb|ACX39618.1| FeS assembly protein SufD [Escherichia coli DH1]
gi|299879030|gb|EFI87241.1| FeS assembly protein SufD [Escherichia coli MS 196-1]
gi|300314771|gb|EFJ64555.1| FeS assembly protein SufD [Escherichia coli MS 175-1]
gi|300449454|gb|EFK13074.1| FeS assembly protein SufD [Escherichia coli MS 116-1]
gi|301074005|gb|EFK88811.1| FeS assembly protein SufD [Escherichia coli MS 146-1]
gi|309701906|emb|CBJ01218.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli ETEC H10407]
gi|315136322|dbj|BAJ43481.1| cysteine desulfurase activator complex subunitSufD [Escherichia
coli DH1]
gi|315618876|gb|EFU99459.1| feS assembly protein SufD [Escherichia coli 3431]
gi|323937284|gb|EGB33563.1| FeS assembly protein SufD [Escherichia coli E1520]
gi|323940652|gb|EGB36843.1| FeS assembly protein SufD [Escherichia coli E482]
gi|331039077|gb|EGI11297.1| FeS assembly protein SufD [Escherichia coli H736]
gi|339415037|gb|AEJ56709.1| feS assembly protein SufD [Escherichia coli UMNF18]
gi|342364677|gb|EGU28776.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli XH140A]
gi|344195386|gb|EGV49455.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli XH001]
gi|345363510|gb|EGW95652.1| feS assembly protein SufD [Escherichia coli STEC_EH250]
gi|345378530|gb|EGX10460.1| feS assembly protein SufD [Escherichia coli G58-1]
gi|345388079|gb|EGX17890.1| feS assembly protein SufD [Escherichia coli STEC_S1191]
gi|359332160|dbj|BAL38607.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
MDS42]
gi|377999461|gb|EHV62542.1| feS assembly protein SufD [Escherichia coli DEC6C]
gi|378009210|gb|EHV72166.1| feS assembly protein SufD [Escherichia coli DEC6D]
gi|378010469|gb|EHV73414.1| feS assembly protein SufD [Escherichia coli DEC6E]
gi|384379571|gb|EIE37439.1| FeS assembly protein SufD [Escherichia coli J53]
gi|385157385|gb|EIF19377.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O32:H37 str. P4]
gi|385705497|gb|EIG42562.1| FeS cluster assembly protein sufD [Escherichia coli H730]
gi|386121929|gb|EIG70542.1| FeS cluster assembly protein sufD [Escherichia sp. 4_1_40B]
gi|386225023|gb|EII47358.1| FeS assembly protein SufD [Escherichia coli 2.3916]
gi|386236707|gb|EII68683.1| FeS assembly protein SufD [Escherichia coli 2.4168]
gi|386240430|gb|EII77354.1| FeS assembly protein SufD [Escherichia coli 3.2303]
gi|386254708|gb|EIJ04398.1| FeS assembly protein SufD [Escherichia coli B41]
gi|404291475|gb|EJZ48361.1| FeS cluster assembly protein sufD [Escherichia sp. 1_1_43]
gi|408194448|gb|EKI19926.1| feS assembly protein SufD [Escherichia coli TW15901]
gi|408203192|gb|EKI28249.1| feS assembly protein SufD [Escherichia coli TW00353]
gi|408229893|gb|EKI53318.1| feS assembly protein SufD [Escherichia coli N1]
gi|408569473|gb|EKK45460.1| feS assembly protein SufD [Escherichia coli 8.0566]
gi|408570720|gb|EKK46676.1| feS assembly protein SufD [Escherichia coli 8.0569]
gi|430940258|gb|ELC60441.1| FeS cluster assembly protein sufD [Escherichia coli KTE44]
gi|431094861|gb|ELE00489.1| FeS cluster assembly protein sufD [Escherichia coli KTE51]
gi|431163960|gb|ELE64361.1| FeS cluster assembly protein sufD [Escherichia coli KTE77]
gi|431171892|gb|ELE72043.1| FeS cluster assembly protein sufD [Escherichia coli KTE81]
gi|431200030|gb|ELE98756.1| FeS cluster assembly protein sufD [Escherichia coli KTE111]
gi|431222503|gb|ELF19779.1| FeS cluster assembly protein sufD [Escherichia coli KTE156]
gi|431227092|gb|ELF24229.1| FeS cluster assembly protein sufD [Escherichia coli KTE161]
gi|431243739|gb|ELF38067.1| FeS cluster assembly protein sufD [Escherichia coli KTE171]
gi|431284270|gb|ELF75128.1| FeS cluster assembly protein sufD [Escherichia coli KTE42]
gi|431467786|gb|ELH47792.1| FeS cluster assembly protein sufD [Escherichia coli KTE197]
gi|431566341|gb|ELI39377.1| FeS cluster assembly protein sufD [Escherichia coli KTE120]
gi|441606848|emb|CCP96640.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|449321574|gb|EMD11585.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli S17]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 52/313 (16%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQ-------IQPITRPSSSLDVSTDAQFPSLVLIDGFIQ 139
T P+RK E +++T + +SQ I P R + +L + + LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDS----VRLVFVDG--- 91
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDL 192
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ------------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSV 137
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV
Sbjct: 138 THIAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL-- 192
Query: 253 NDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTG 308
ND ++ + + + ++H L + S + AH TA + + G
Sbjct: 193 NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFL---LG 249
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
G + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 250 GAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSD 307
Query: 367 SLGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 308 K-GRAVFNGLINV 319
>gi|159896939|ref|YP_001543186.1| FeS assembly protein SufB [Herpetosiphon aurantiacus DSM 785]
gi|159889978|gb|ABX03058.1| FeS assembly protein SufB [Herpetosiphon aurantiacus DSM 785]
Length = 472
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 10/188 (5%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G KV+ P+ Y + N+ + R +++V+EG EV IE +
Sbjct: 193 VYVPKGVKVDIPL-QAYFRINAENMGQFE------RTLIIVDEGAEVHYIEGCTAPVYST 245
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH-IKWTAVRQETASGYELVEVSTGGKLSR 313
++V+E++I KGGK R++ +QN + N + + AV E AS E V+ + G KL+
Sbjct: 246 NSLHSAVVEIIIKKGGKCRYTTIQNWANNIFNLVTKRAVAYEDAS-MEWVDGNIGSKLTM 304
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 373
V +G + E+ S Q QD ++++ P R +K V+ + G+ +
Sbjct: 305 KYPAVYMMGRGAKGEVLSVAYAGEGQHQDAGAKMVHGAPDTTSRITNKS-VSKNGGRTTY 363
Query: 374 DGNVKVNR 381
G KV R
Sbjct: 364 RGLAKVMR 371
>gi|424932994|ref|ZP_18351366.1| Cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|407807181|gb|EKF78432.1| Cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
Length = 424
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 128/307 (41%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q LL P+RK E +++T + + + S S + P LV IDG
Sbjct: 34 QQLLRLGLPTRKHEDWKYTPLDALLNGRFVADEGASLSAEQRDALALPLDAWRLVFIDGR 93
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
L D + + D + + D + ++F + A + I V
Sbjct: 94 YH------PQLSDDLAASGVEVSVDNQRQHLPDALQP----EVFLHLTESLAQTVTRIRV 143
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P +++ P+ L +++ + L ++ R + +E G E I+E ++ ++
Sbjct: 144 PRNRRLDKPLLLMHIT---SGLAGDALNTAHYRHHLALESGAEATIVEHYLSLN-EQPHF 199
Query: 258 ANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
L + + ++H ++ +S + AH R +A + GG++ RH
Sbjct: 200 TGGRLTMTVADNAHLQHIKLAFENARSYHFAHNDLLLGRDASAFSSSFL---LGGQVLRH 256
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
+ G ++ L+S + V ++ D SR LDH GYC RQLHK IV+ G+AV
Sbjct: 257 QTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVSDK-GRAV 313
Query: 373 FDGNVKV 379
F+G + V
Sbjct: 314 FNGLINV 320
>gi|307565753|ref|ZP_07628222.1| FeS assembly protein SufD [Prevotella amnii CRIS 21A-A]
gi|307345579|gb|EFN90947.1| FeS assembly protein SufD [Prevotella amnii CRIS 21A-A]
Length = 447
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 138/305 (45%), Gaps = 23/305 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-SMIKSSQIQPITRPSSSLD--VSTDAQFP 129
+ LRD + +PS+K+E +++T+ S+ + + + R +D + P
Sbjct: 26 MNDLRDEAFMNFKKLGFPSKKEERYKYTNIHSLFEPNYGLNLNRLEIPIDPYKTFKCGIP 85
Query: 130 SLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFW 182
+L FI N L LP +GV + SL + + ++ + + D
Sbjct: 86 NLSTSLYFIVNDQLYTKKLPNTYLGEGVIIDSLAKAATHYPELITKYYGKLAKTSEDGIT 145
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
++N M A D IYVP K++N + + +++ +VD + N RV++++EEG E
Sbjct: 146 ALNTMLAQDGLFIYVPKNVKLKNTVQI--VNILRSDVD----LMVNRRVLIILEEGAEGQ 199
Query: 243 IIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
+ F +D + V+E +G + + L+ I ++QE+ S
Sbjct: 200 FL--FCDDTADDRNFLTTQVIEAFVGNNAHIDLNCLEETHTKNVRISNAFIQQESYSKAS 257
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QL 359
++ ++R+ +++ G +E ++ +++D+ Q + + L+DH +C+ +L
Sbjct: 258 HNVITLHNGITRNMLNLTFKGQHSECFING--CIIADKEQHVDNNTLIDHAAPHCQSHEL 315
Query: 360 HKCIV 364
+K ++
Sbjct: 316 YKYVL 320
>gi|404486685|ref|ZP_11021875.1| FeS assembly protein SufD [Barnesiella intestinihominis YIT 11860]
gi|404336503|gb|EJZ62964.1| FeS assembly protein SufD [Barnesiella intestinihominis YIT 11860]
Length = 449
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 148/347 (42%), Gaps = 35/347 (10%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-- 107
I L S ++ + S SS++ + LR+ + L S PS KDE R TD + S
Sbjct: 8 IDLYRSQKNLINSHSSAV-----MNGLREEAVALLESRGLPSLKDEEHRRTDIESVYSPD 62
Query: 108 -----SQIQPITRPSSSL--DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
+I P DV + V+ D F + S LPDGV VGSL +
Sbjct: 63 YGLNLGRIDIEINPYEVFRCDVPNLSTLLYFVVNDSFYKRVQPVSSKLPDGVLVGSLCDM 122
Query: 161 SDGIMKRVSDFISEF--QCGDL----FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
S + D +S + + D+ ++N A D +Y+P G VE PI L +++
Sbjct: 123 S----LQYPDLVSRYYGKVADMKRDGTVALNTAFAQDGFFLYIPDGVIVEKPIQL--VNI 176
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
GNVD + N R++++V + + ++ E + ++ V E+ + +
Sbjct: 177 LRGNVDF----MVNRRLLIVVGKRAQAKLLVCDHSDEATVKFLSSQVCEIFVDDDAVFDY 232
Query: 275 SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHL 334
++ S N + + VRQ S + + ++R+N + G ELS +
Sbjct: 233 YDIEESSENTSKVSSVFVRQGERSNVLVNGIVLHNGVTRNNYYSAFEGE--HAELSLCGM 290
Query: 335 LVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKV 379
++D+ Q + + +DH +C +L K ++ S + F G + V
Sbjct: 291 AIADKGQVVDTYTHIDHAVPHCHSNELFKYVLNDS-ARGSFSGRILV 336
>gi|424913816|ref|ZP_18337180.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392849992|gb|EJB02513.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 424
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 130/319 (40%), Gaps = 30/319 (9%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
LP + LRD L P+R+ E + +TD + T P D +DA
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TLPPQVGDAGSDA 80
Query: 127 QFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFISEFQCGDL 180
P L+DG IQ A + DG+ V + S+ ++ +D + D
Sbjct: 81 LEP---LVDGSTVLAVIQGHA-SQKAATDGLGVSAY---SEHLLDGSAADGLDALGSDDA 133
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
ING D V+ VPA +++ P+ +++ V G +LP++ G +
Sbjct: 134 VGRINGSFVRDGYVVDVPADTELDAPLEIQF--VHAGGQTHTRLPVA-------FASGVK 184
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
+IE + G D + V ++ +G+G ++ LQ H+ + +
Sbjct: 185 ATVIERHLAVTG-DPALVSHVSDITVGEGAELTWIILQQHGAEDTHLGQIRIDLGADAKL 243
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
L ++ GGKL R +H++ G + L +LL +D D+ L D P ++
Sbjct: 244 RLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVI 303
Query: 361 KCIVAHSLGQAVFDGNVKV 379
+ +V + VF G ++V
Sbjct: 304 RNVV-FDRAKGVFQGMIRV 321
>gi|293414997|ref|ZP_06657640.1| FeS assembly protein SufD [Escherichia coli B185]
gi|291432645|gb|EFF05624.1| FeS assembly protein SufD [Escherichia coli B185]
Length = 423
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSILGEVSPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|222086101|ref|YP_002544633.1| FeS assembly protein SufD [Agrobacterium radiobacter K84]
gi|221723549|gb|ACM26705.1| FeS assembly protein SufD [Agrobacterium radiobacter K84]
Length = 424
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 134/325 (41%), Gaps = 42/325 (12%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT--------SMIKSSQIQPI--TRP 116
LP + +RD L + P+R+ E + +TD + + + ++P+ T
Sbjct: 27 LPGDGEVFAIRDRLLDDLKTAGLPTRRFEAWHYTDFKNLLRTVPTDLGTGSVEPLSPTAE 86
Query: 117 SSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL--LGVSDGIMKRVSDFISE 174
S++ + +DG I + ++ +L DG L LG D I + + F+
Sbjct: 87 GSAVLSVLQGRAVGKASVDGLIVSRYID--SLTDGTAAAGLEALGRDDAIGRINASFVR- 143
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D VI P G +++ P+ ++++ GG + S+ LP++
Sbjct: 144 ----------------DGYVIEFPDGTELDAPLEIQFIHA-GGQIHSR-LPVT------- 178
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G + +IE G G +S+ ++ +GKG +V LQ Q H+ V
Sbjct: 179 FGVGAKATVIERHEGVPGA-AALVSSISDITVGKGAEVTWIILQEQGSEDTHLGQIRVDL 237
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 354
+ +L ++ GGKL R +H++ G E L +LL D D+ L D P
Sbjct: 238 GQDAKLKLFVINAGGKLVRQELHIKVSGEGAELSLRGVNLLGGDTHTDVTMVLGHDVPHT 297
Query: 355 YCRQLHKCIVAHSLGQAVFDGNVKV 379
++ + +V + VF G ++V
Sbjct: 298 SSTEIVRNVV-FDRARGVFQGMIRV 321
>gi|419700478|ref|ZP_14228084.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SCI-07]
gi|422381748|ref|ZP_16461912.1| FeS assembly protein SufD [Escherichia coli MS 57-2]
gi|432732376|ref|ZP_19967209.1| FeS cluster assembly protein sufD [Escherichia coli KTE45]
gi|432759460|ref|ZP_19993955.1| FeS cluster assembly protein sufD [Escherichia coli KTE46]
gi|433198250|ref|ZP_20382162.1| FeS cluster assembly protein sufD [Escherichia coli KTE94]
gi|324007049|gb|EGB76268.1| FeS assembly protein SufD [Escherichia coli MS 57-2]
gi|380348254|gb|EIA36536.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SCI-07]
gi|431275563|gb|ELF66590.1| FeS cluster assembly protein sufD [Escherichia coli KTE45]
gi|431308633|gb|ELF96912.1| FeS cluster assembly protein sufD [Escherichia coli KTE46]
gi|431722916|gb|ELJ86878.1| FeS cluster assembly protein sufD [Escherichia coli KTE94]
Length = 423
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEIAPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSSQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|222156432|ref|YP_002556571.1| Protein sufD [Escherichia coli LF82]
gi|387617020|ref|YP_006120042.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O83:H1 str. NRG 857C]
gi|222033437|emb|CAP76178.1| Protein sufD [Escherichia coli LF82]
gi|312946281|gb|ADR27108.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O83:H1 str. NRG 857C]
Length = 423
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG +
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + + D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDDC-QGLPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTVRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|375114283|ref|ZP_09759453.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
gi|322714429|gb|EFZ06000.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
Length = 423
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGKSRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCITYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|318040527|ref|ZP_07972483.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. CB0101]
Length = 414
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 62/329 (18%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
L L+ + L P PS ++E +RFTD +++ Q P+T S + A P
Sbjct: 30 LALLQQRGREALRQQPIPSSRNEDWRFTDLALL---QTLPLTAAS-----AAAAALPE-- 79
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSD-----GIMKRVSDFISEFQCGDLFWSINGM 187
+ + AL L+ + GS ++D G+ + +D I++
Sbjct: 80 -----VASGALRLN------WNGSADPLADQALPAGLQRLSADEIAQ------------- 115
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG-------- 239
LG AGC+ P+ L + + E V + ++ + + LV G
Sbjct: 116 ---GLGHTLAAAGCEQHWPVELNHAAAE--RVLALRVTSRSQVSLELVSAAGAGLQALRL 170
Query: 240 -------EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
+ +++ +G+ + + V+E + +G ++ H + +AA + A+
Sbjct: 171 LLLLEEKAELDLSQWIEAQGSGLH--SLVIEAHLARGARLSHGLVALGQADAALLAHVAL 228
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
QE S +L VS+G L+R Q+ +T L L+ + D HS + P
Sbjct: 229 EQEPESDAQLSSVSSGWGLARLEPRAVQVDGSAQTTLRGLQLVDGQRIADTHSFVEFKGP 288
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
G QLHK + A G++VF+G V+V R
Sbjct: 289 EGQLDQLHKAVAAGQ-GRSVFNGAVRVPR 316
>gi|258542736|ref|YP_003188169.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01]
gi|384042657|ref|YP_005481401.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-12]
gi|384051174|ref|YP_005478237.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-03]
gi|384054282|ref|YP_005487376.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-07]
gi|384057516|ref|YP_005490183.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-22]
gi|384060157|ref|YP_005499285.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-26]
gi|384063449|ref|YP_005484091.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-32]
gi|384119459|ref|YP_005502083.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256633814|dbj|BAH99789.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01]
gi|256636873|dbj|BAI02842.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-03]
gi|256639926|dbj|BAI05888.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-07]
gi|256642982|dbj|BAI08937.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-22]
gi|256646037|dbj|BAI11985.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-26]
gi|256649090|dbj|BAI15031.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-32]
gi|256652077|dbj|BAI18011.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655134|dbj|BAI21061.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-12]
Length = 420
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 132/323 (40%), Gaps = 44/323 (13%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP------ITRPSSSLD---VSTDA- 126
R ++ LL T P R E +++T + + + Q + S LD DA
Sbjct: 20 RQAAIGALLRTGLPDRHVEAWKYTSLRPLSAQEFQAPPAQYDAVQAKSLLDNLLSQHDAV 79
Query: 127 -QFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---DLF 181
P +V ++G F+++ LS LP+GV V + S+ Q D
Sbjct: 80 QALPHIVFVNGRFVKD----LSLLPEGVDVSFF---------SQNSLTSDVQASPDRDPL 126
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N D +++V G + L L V G S +PR V++EEG +
Sbjct: 127 VALNTALVDDGAILHVAKGADA-GRVLLISLGVAGDTAIS-----FHPRHSVVLEEGAHL 180
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
++ G Y+ N V EV +G+ K+ H+ LQ + A + T V+ Y
Sbjct: 181 SLLSL---SAGVGPYFHNPVTEVTVGESAKLYHTTLQTEGPQAIALATTYVQVAGHGVYN 237
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 359
+ G LSRH VH + P + ++ L Q D+ S ++ H C RQ
Sbjct: 238 SFALGLGSLLSRHEVHARLNAPHAQLHVNGAQNLAEHQVGDITS--VITHAASDCISRQT 295
Query: 360 HKCIV-AHSLGQAVFDGNVKVNR 381
+ ++ H+ G VF G V V +
Sbjct: 296 VRNVLDGHARG--VFQGKVLVEQ 316
>gi|423120689|ref|ZP_17108373.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5246]
gi|376396190|gb|EHT08833.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5246]
Length = 424
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 150/343 (43%), Gaps = 45/343 (13%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSS--- 108
LP+SS++L Q L + L + + Q +L P+RK E +++T +
Sbjct: 4 LPNSSNALQQWHHLFEALGERRTPEARRHLQQVLRLGLPTRKHEDWKYTPLDTLNKGTFV 63
Query: 109 QIQPITRPSSSLD---VSTDAQFPSLVLIDG-FIQNSALNLSNLPDGVYVGS-LLGVSDG 163
+ P T ++ D +S DA LV IDG F + + NL+ V V G+ D
Sbjct: 64 ALPPGTLTATERDQRALSVDAW--RLVFIDGQFSETLSDNLAGSGYDVSVADDRQGLPDA 121
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ V F + A + I V + P+ L +++ GG D
Sbjct: 122 VQPEV------------FLHLTESLAQTVTRIRVKRHQRPAKPLLLMHVT-RGGTGDD-- 166
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH---SYLQNQ 280
L ++ R + +E G E IIE ++ + ++ + L + + ++H ++ Q
Sbjct: 167 LNTAHYRHHLELESGAEATIIEHYLSLD-EQRHFTGARLTMSVADNAHLQHIKLAFENAQ 225
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
S + AH R +A + GG + H Q LG ++ ++S + V+++
Sbjct: 226 SNHFAHNDLALGRDASAFSSSFL---LGGAVLHHRTSTQLLGENSTLRINSLAMPVNNEV 282
Query: 341 QDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
D SR LDH GYC RQLHK IV+ G+AVF+G + V +
Sbjct: 283 CD--SRTWLDHRVGYCNSRQLHKTIVSDK-GRAVFNGLINVAK 322
>gi|16764722|ref|NP_460337.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167994393|ref|ZP_02575485.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|374980378|ref|ZP_09721708.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378444801|ref|YP_005232433.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378449881|ref|YP_005237240.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|378699259|ref|YP_005181216.1| hypothetical protein SL1344_1306 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378983929|ref|YP_005247084.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378988712|ref|YP_005251876.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|379700543|ref|YP_005242271.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383496083|ref|YP_005396772.1| hypothetical protein UMN798_1430 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|422025523|ref|ZP_16371953.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|422030527|ref|ZP_16376726.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|427549182|ref|ZP_18927263.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|427564808|ref|ZP_18931965.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|427584745|ref|ZP_18936763.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|427607175|ref|ZP_18941577.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|427632272|ref|ZP_18946523.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|427655566|ref|ZP_18951282.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|427660701|ref|ZP_18956189.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|427666722|ref|ZP_18960958.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|427754916|ref|ZP_18966082.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|16419892|gb|AAL20296.1| iron-sulfur component of FhuF stability protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|205327745|gb|EDZ14509.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|261246580|emb|CBG24390.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993259|gb|ACY88144.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157907|emb|CBW17402.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912357|dbj|BAJ36331.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321223998|gb|EFX49061.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323129642|gb|ADX17072.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|332988259|gb|AEF07242.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|380462904|gb|AFD58307.1| hypothetical protein UMN798_1430 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|414020328|gb|EKT03915.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|414020565|gb|EKT04144.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|414022098|gb|EKT05599.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|414034441|gb|EKT17368.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|414035798|gb|EKT18654.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|414039312|gb|EKT21989.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|414048813|gb|EKT31047.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|414050378|gb|EKT32554.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|414054922|gb|EKT36848.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|414060399|gb|EKT41914.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|414066026|gb|EKT46664.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
Length = 423
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQALAAPVQPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHFKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|331657655|ref|ZP_08358617.1| FeS assembly protein SufD [Escherichia coli TA206]
gi|331055903|gb|EGI27912.1| FeS assembly protein SufD [Escherichia coli TA206]
Length = 423
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG +
Sbjct: 39 TGLPTRKHENWKYTPLDGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + + D I ++F + A + I V G
Sbjct: 97 ---LSDATEGS--GYEVSINDDC-QGLPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|218548733|ref|YP_002382524.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ATCC 35469]
gi|218356274|emb|CAQ88892.1| component of SufBCD complex [Escherichia fergusonii ATCC 35469]
Length = 423
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 138/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHEHWKYTPLEGLTNSQFVSIAGEIFPQQRDALALTLDA--VRLVFVDG---RY 93
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + + D I ++F + A + I V G
Sbjct: 94 VPELSDTTEGS--GYEVSINDD-RQGLPDAIQ----AEVFLHLTESLAQSVTHIAVKRGQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVVGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|71274756|ref|ZP_00651044.1| FeS assembly protein SufD [Xylella fastidiosa Dixon]
gi|170730001|ref|YP_001775434.1| ABC transporter membrane protein [Xylella fastidiosa M12]
gi|71164488|gb|EAO14202.1| FeS assembly protein SufD [Xylella fastidiosa Dixon]
gi|71729032|gb|EAO31160.1| FeS assembly protein SufD [Xylella fastidiosa Ann-1]
gi|167964794|gb|ACA11804.1| ABC transporter membrane protein [Xylella fastidiosa M12]
Length = 422
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 133/297 (44%), Gaps = 14/297 (4%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSN 147
P + E +++T ++ ++++D + P+ LV ++G S NLS
Sbjct: 33 PDLRSETWKYTSLRTLERRHFSQAPTAATTIDPAWLNTIPTPRLVFVNGRHSPSLSNLSG 92
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENP 206
LP G+ + L + K + F+ D +F +N A + ++ V V P
Sbjct: 93 LPQGMTLHPLSALPREQDKGLHRSPPHFKHRDEIFARLNTALADEGVLLRVHQNITVNTP 152
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
I+L +++ G +D + R + + G + +IE + G+ + N + + +
Sbjct: 153 IHLIFIT-PAGEIDHAW----HLRNQIQLHRGASLQLIEHQL-HTGHAAHLNNVLTRIHL 206
Query: 267 GKGGKVRHSYLQNQSL-NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
G + H+ LQN + + ++ AV + A Y V+V G KLSRH ++V+ G +
Sbjct: 207 APGACLEHARLQNDATATTSFLRTDAVLAQDAE-YRRVDVELGAKLSRHELNVRLEGDN- 264
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L++ +L+ T+ L +RL ++H R +L + + VF G + +++
Sbjct: 265 -ARLTANGILLGHLTRHLDTRLHIEHIARNTASELLWRGIGTDRSRVVFHGGIHIHQ 320
>gi|427384574|ref|ZP_18881079.1| FeS assembly protein SufD [Bacteroides oleiciplenus YIT 12058]
gi|425727835|gb|EKU90694.1| FeS assembly protein SufD [Bacteroides oleiciplenus YIT 12058]
Length = 447
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 119/281 (42%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 101 NKALPTSHLPEGVIFGSLKEMAEKHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P VE PI L +++ G+V+ + N RV++++E+G + ++ V D
Sbjct: 161 PKNVIVERPIQL--VNILRGDVNF----LVNRRVLIVLEDGAQARML---VCDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV +G+ L+ + I V+QE S L ++ +R+
Sbjct: 212 FLATQVIEVFVGENAVFDLYELEETHTSTVRISSLYVKQEANSNVLLNGMTLYNGTTRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + + D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIEDKNQHVDNNTSIDHSVPNC 310
>gi|363582469|ref|ZP_09315279.1| FeS assembly protein SufD [Flavobacteriaceae bacterium HQM9]
Length = 437
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 138/339 (40%), Gaps = 14/339 (4%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L E L S + + + + +R + ++ +P++K E +++T + + +
Sbjct: 1 MELKEKLVSSFLAFEAEVDTTNDIHDIRTEAIKSFEKYGFPTKKLEAWKYTSLNSVLKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ + ++ Q+ +V IDG + ++ V + S D
Sbjct: 61 FSLFPKKEAVIEFKDVKQYFISDLDSYKIVFIDGVYSSHLSGTTHDKIDVCLMSSALTQD 120
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ + ++ D S+N A + IY+P + PI + + + +
Sbjct: 121 RFKAVIDVYYNKIAKEDGLVSLNTAYAREGAYIYIPKNTAADKPIQIIHFAT-----GLE 175
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+ + PR +++ E+ EV IIE + NSV E+ GK V + +QN +
Sbjct: 176 QASMLQPRNLIVAEDNTEVTIIERHQNLSDKKVF-TNSVTEIYTGKNAHVDYYKIQNDTD 234
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
A I T Q + S + + GG+++R+N++ Q G ++ L+ +L D
Sbjct: 235 TATLIDNTFAEQHSNSLCSVHTFAFGGEITRNNLNFFQKGQGIDSILNGVTILEGKAHVD 294
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
++ + P Q +K I VF+G + V++
Sbjct: 295 HNTLVEHQQPNCESHQDYKGIFDEK-STGVFNGKIIVDQ 332
>gi|422805721|ref|ZP_16854153.1| FeS assembly protein SufD [Escherichia fergusonii B253]
gi|424816122|ref|ZP_18241273.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ECD227]
gi|324113446|gb|EGC07421.1| FeS assembly protein SufD [Escherichia fergusonii B253]
gi|325497142|gb|EGC95001.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ECD227]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHEHWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V + + ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEVVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|237785543|ref|YP_002906248.1| ABC-type transport system involved in Fe-S cluster assembly
permease [Corynebacterium kroppenstedtii DSM 44385]
gi|237758455|gb|ACR17705.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Corynebacterium kroppenstedtii DSM
44385]
Length = 484
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G VE P+ Y + N+ + R +++V+E V +E
Sbjct: 205 IYVPKGVHVEIPL-QAYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K+S
Sbjct: 258 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKCEEGATMEWIDGNIGSKVSMK 317
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S + Q QD ++++ P + K VA G+A +
Sbjct: 318 YPAVWMTGPYSRGEVLSVAMAGEGQYQDTGAKMVHMAPHTSSNIVSKS-VARGGGRAAYR 376
Query: 375 GNVKVN 380
G VKVN
Sbjct: 377 GLVKVN 382
>gi|387506925|ref|YP_006159181.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. RM12579]
gi|419126234|ref|ZP_13671123.1| feS assembly protein SufD [Escherichia coli DEC5C]
gi|419131607|ref|ZP_13676448.1| feS assembly protein SufD [Escherichia coli DEC5D]
gi|209769184|gb|ACI82904.1| hypothetical protein ECs2388 [Escherichia coli]
gi|374358919|gb|AEZ40626.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. RM12579]
gi|377976289|gb|EHV39600.1| feS assembly protein SufD [Escherichia coli DEC5C]
gi|377977010|gb|EHV40311.1| feS assembly protein SufD [Escherichia coli DEC5D]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 136/311 (43%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V + + ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEVVNTAHYRHHLELAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFSINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G + ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENCTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|295096073|emb|CBK85163.1| Iron-regulated ABC transporter permease protein SufD [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 150/341 (43%), Gaps = 46/341 (13%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTS-------M 104
LP+SS++L Q L + + + Q +L P+RK E +++T +
Sbjct: 4 LPNSSNALQQWHRLFEAQGGARSEQAQHHLQQMLRLGLPTRKHENWKYTPLDGLLNGEFV 63
Query: 105 IKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ +Q+ P R L +S DA LV +DG + + L D V D +
Sbjct: 64 TRLAQVSPDQR--DMLALSVDA--VRLVFVDGLFR------AELSDSVQESGF----DIV 109
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS--VEGGNVDSK 222
+ ++ ++F + + + I V + P+ L +++ VEG +++
Sbjct: 110 INDERQSLNAPVQPEVFLHLTESLSQSVTHIRVKRNQRPAKPLLLMHITQGVEGDEINT- 168
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQS 281
++ R + + EG E +IE +V ND ++ S L + + ++ H L ++
Sbjct: 169 ----AHYRHHLELAEGAEATVIEHYVSL--NDTRHFTGSRLTMNVAANAQLHHIKLAFEN 222
Query: 282 LNAAHIKWTAVR-QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ H + + A+ Y GG + RHN Q G +T ++S + V +
Sbjct: 223 PLSHHFAHNDILLGQDAAAYSH-SFLLGGAVLRHNTSTQLNGENTTLRINSLAMPVKSEV 281
Query: 341 QDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 282 CD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|432815376|ref|ZP_20049161.1| FeS cluster assembly protein sufD [Escherichia coli KTE115]
gi|431364432|gb|ELG50963.1| FeS cluster assembly protein sufD [Escherichia coli KTE115]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSYL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSSQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|224584116|ref|YP_002637914.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224468643|gb|ACN46473.1| hypothetical protein SPC_2357 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGKSRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|238910812|ref|ZP_04654649.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|62179962|ref|YP_216379.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62127595|gb|AAX65298.1| required for stability of iron-sulfur component of FhuF [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGKSRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|416422329|ref|ZP_11690233.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416431054|ref|ZP_11695336.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416441171|ref|ZP_11701383.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416446456|ref|ZP_11705046.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416452110|ref|ZP_11708777.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416458877|ref|ZP_11713386.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416468022|ref|ZP_11717769.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416480042|ref|ZP_11722699.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416489540|ref|ZP_11726304.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416542918|ref|ZP_11751918.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416576135|ref|ZP_11768822.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583431|ref|ZP_11773283.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416590847|ref|ZP_11778022.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416598886|ref|ZP_11783237.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416608037|ref|ZP_11789031.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416611303|ref|ZP_11790733.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416624422|ref|ZP_11798043.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416630418|ref|ZP_11800718.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416640633|ref|ZP_11805098.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416650904|ref|ZP_11810669.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416654587|ref|ZP_11812245.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416665845|ref|ZP_11816996.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416674232|ref|ZP_11821215.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416690757|ref|ZP_11825999.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416707091|ref|ZP_11832189.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416714387|ref|ZP_11837705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416717178|ref|ZP_11839459.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416725069|ref|ZP_11845439.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416734886|ref|ZP_11851327.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416738595|ref|ZP_11853385.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416750721|ref|ZP_11859866.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|416759099|ref|ZP_11864027.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416762036|ref|ZP_11866086.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416768070|ref|ZP_11870347.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|418485791|ref|ZP_13054773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418489737|ref|ZP_13056437.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418495573|ref|ZP_13062015.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418499132|ref|ZP_13065541.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418503010|ref|ZP_13069379.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418510215|ref|ZP_13076501.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418527166|ref|ZP_13093123.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|322616756|gb|EFY13665.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322619984|gb|EFY16857.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322622295|gb|EFY19140.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322627818|gb|EFY24608.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633083|gb|EFY29826.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636671|gb|EFY33374.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322641304|gb|EFY37945.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644928|gb|EFY41461.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650233|gb|EFY46647.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322660134|gb|EFY56373.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322665300|gb|EFY61488.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669557|gb|EFY65705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673483|gb|EFY69585.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677411|gb|EFY73475.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679926|gb|EFY75965.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687398|gb|EFY83370.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192351|gb|EFZ77582.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198630|gb|EFZ83731.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203111|gb|EFZ88142.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323213809|gb|EFZ98587.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217653|gb|EGA02368.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323222898|gb|EGA07249.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227190|gb|EGA11363.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323229455|gb|EGA13578.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323232678|gb|EGA16774.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240284|gb|EGA24328.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323242728|gb|EGA26749.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323245939|gb|EGA29927.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252817|gb|EGA36654.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323255204|gb|EGA38982.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323260084|gb|EGA43709.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323267151|gb|EGA50636.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323271525|gb|EGA54946.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|366055681|gb|EHN20016.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366059429|gb|EHN23703.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366068360|gb|EHN32501.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366071667|gb|EHN35761.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366074734|gb|EHN38796.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366077075|gb|EHN41100.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366827786|gb|EHN54684.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372204635|gb|EHP18162.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEAKVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|161614214|ref|YP_001588179.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|168463221|ref|ZP_02697152.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442942|ref|YP_002040627.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|200390278|ref|ZP_03216889.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|417539663|ref|ZP_12191895.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|418513882|ref|ZP_13080103.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|418761151|ref|ZP_13317296.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418768708|ref|ZP_13324752.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418769647|ref|ZP_13325674.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418776113|ref|ZP_13332062.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418780454|ref|ZP_13336343.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418786115|ref|ZP_13341935.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418788510|ref|ZP_13344304.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418795832|ref|ZP_13351533.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418798571|ref|ZP_13354248.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|418802306|ref|ZP_13357933.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|418808909|ref|ZP_13364462.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418813065|ref|ZP_13368586.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418816855|ref|ZP_13372343.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418820296|ref|ZP_13375729.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418824926|ref|ZP_13380256.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|418832723|ref|ZP_13387657.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418835385|ref|ZP_13390280.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418839805|ref|ZP_13394637.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418846399|ref|ZP_13401168.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418849688|ref|ZP_13404413.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418855385|ref|ZP_13410041.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418858857|ref|ZP_13413467.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418862943|ref|ZP_13417481.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418868562|ref|ZP_13423003.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419787683|ref|ZP_14313390.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419792057|ref|ZP_14317700.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|161363578|gb|ABX67346.1| hypothetical protein SPAB_01957 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401605|gb|ACF61827.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195633913|gb|EDX52265.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|199602723|gb|EDZ01269.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|353664051|gb|EHD02565.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|366080796|gb|EHN44753.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|392619178|gb|EIX01563.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392619441|gb|EIX01825.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392730708|gb|EIZ87948.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392739093|gb|EIZ96232.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392740769|gb|EIZ97884.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392746746|gb|EJA03752.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392749129|gb|EJA06107.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392749504|gb|EJA06481.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392758360|gb|EJA15235.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392762812|gb|EJA19624.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392767228|gb|EJA24000.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392774291|gb|EJA30986.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392775592|gb|EJA32284.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392777319|gb|EJA34002.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|392789023|gb|EJA45543.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392792565|gb|EJA49019.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392796793|gb|EJA53121.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392803795|gb|EJA59979.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392810272|gb|EJA66292.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392812249|gb|EJA68244.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392818788|gb|EJA74668.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|392820691|gb|EJA76540.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392821443|gb|EJA77267.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392831624|gb|EJA87255.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392832811|gb|EJA88426.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392837252|gb|EJA92822.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|425076289|ref|ZP_18479392.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425086922|ref|ZP_18490015.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405591998|gb|EKB65450.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405603646|gb|EKB76767.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 424
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 128/307 (41%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q LL P+RK E +++T + + + S S + P LV IDG
Sbjct: 34 QQLLRLGLPTRKHEDWKYTPLDALLNGRFVADEGASLSTEQRDALALPLDAWRLVFIDGR 93
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
L D + + D + + D + ++F + A + I V
Sbjct: 94 YH------PQLSDDLAASGVEVSVDNQRQHLPDALQP----EVFLHLTESLAQTVTRIRV 143
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P +++ P+ L +++ + L ++ R + +E G E I+E ++ ++
Sbjct: 144 PRNRRLDKPLLLMHIT---SGLVGDALNTAHYRHHLALESGAEATIVEHYLSL-NEQPHF 199
Query: 258 ANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
L + + ++H ++ +S + AH R +A + GG++ RH
Sbjct: 200 TGGRLTMTVADNAHLQHIKLAFENARSYHFAHNDLLLGRDASAFSSSFL---LGGQVLRH 256
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
+ G ++ L+S + V ++ D SR LDH GYC RQLHK IV+ G+AV
Sbjct: 257 QTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVSDK-GRAV 313
Query: 373 FDGNVKV 379
F+G + V
Sbjct: 314 FNGLINV 320
>gi|227327028|ref|ZP_03831052.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 448
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I + AG + E P+YL ++S + L + R + VE G IIE +V + +
Sbjct: 159 LIRLAAGQQAEKPLYLLHIS----SCQEAALNTVHHRHHLNVERGASAEIIEHYVSLDEH 214
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQS---LNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + L V + +V H L ++ + AH R + + G
Sbjct: 215 -AHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHNDLVLARDARVRSHSFL---LGAG 270
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVAHSL 368
L+RHN Q G T ++S L V + D +R L+H +GY RQLHK IV +
Sbjct: 271 LTRHNTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV-NDR 327
Query: 369 GQAVFDGNVKV 379
+AVF+G +KV
Sbjct: 328 ARAVFNGMIKV 338
>gi|416497560|ref|ZP_11729828.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322655808|gb|EFY52110.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
Length = 439
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEAKVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|190891949|ref|YP_001978491.1| Fe-S cluster assembly ABC transporter permease [Rhizobium etli CIAT
652]
gi|190697228|gb|ACE91313.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 652]
Length = 424
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 133/337 (39%), Gaps = 42/337 (12%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ LP + LRD L P+R+ E + +TD + +
Sbjct: 15 ALIEAFNQQIGDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTD--------FKNLL 66
Query: 115 R--PSSSLDVSTDAQFP----SLVL--IDGFIQNSA----LNLSNLPDGVYVGSLLGVSD 162
R PS + D +D P S+VL I G A L +S + + GS G D
Sbjct: 67 RGLPSQAGDAGSDPLEPLVAGSMVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAGGLD 126
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ D ING D V+ VP +E+P+ +++ + G
Sbjct: 127 AL-----------GGDDAVGRINGSFVRDGYVVDVPDNTDLEDPLEIQF--IHAGGQTHT 173
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+LP+S G + +IE G D + + + ++ +GKG ++ LQ Q
Sbjct: 174 RLPVS-------FGAGVQATVIERHRAVTG-DAAFVSHISDITVGKGTELTWIILQQQGA 225
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
+ H+ V + + ++ GGKL R +H+ G + L +LL +D D
Sbjct: 226 DDTHLGQIRVDLGADAKLRMFVINAGGKLVRQELHINVTGEGADLTLRGINLLGADSHTD 285
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ L D P ++ + +V + VF G ++V
Sbjct: 286 VTMVLGHDVPHTGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|407892711|ref|ZP_11151741.1| hypothetical protein Dmas2_01215 [Diplorickettsia massiliensis 20B]
Length = 402
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 129/317 (40%), Gaps = 22/317 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS---SQIQPITRPSSSLDVSTDAQFP 129
L + R S+ L +P RK +++T S + S P++ + +L +
Sbjct: 5 LTEQRQSALARLTEMGFPDRKHAAWKYTPLSSLLGKPFSATDPLSAATQTLVLEKSTSDY 64
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL------FWS 183
LV +DGF ++ ++ LP GV +GSL +++ +SE + + F
Sbjct: 65 RLVFVDGFFISTLSTIAPLPPGVQIGSL----ATFLQQSPTLVSEQKINPIQRDSNSFID 120
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N D I V ++ PI L +++ D +PI N + + + +
Sbjct: 121 LNTAFLQDGAYIDVAENIQLSAPIELVFIA----TCDLGFIPIRNR---IQLGPSSQAVV 173
Query: 244 IEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+E+++ E C + N V E + ++ H L +L + H+ V Q+ S
Sbjct: 174 VEKYLSLTEKPLCTFTNVVTECTLENQSQLEHYKLIRDTLTSFHLGHLCVNQQAGSQCAA 233
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
++ G+ R +V + L +L + Q H+ + + +QL+K
Sbjct: 234 YSLALQGQFIRSDVTIALQQTGARCRLQGLYLPKNKQHVSHHTVIAHQDADTHSQQLYKG 293
Query: 363 IVAHSLGQAVFDGNVKV 379
++A + A F G + V
Sbjct: 294 VLADN-ATAAFQGKIIV 309
>gi|399910100|ref|ZP_10778414.1| Fe-S cluster assembly protein SufD [Halomonas sp. KM-1]
Length = 356
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGG 239
F ++N + V+ + G VE PI L++LS + P+ S+PR++V
Sbjct: 47 FSALNTAFMEEGAVVRLAPGSVVEKPILLQFLS------RANAAPVMSHPRILVEAGARS 100
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ +IE VG E + N V E+++ +G + H LQ L H+ V Q S
Sbjct: 101 QATLIEHHVG-ESEAANFTNLVAELMLDRGAILTHYKLQEAPLADLHVASIHVEQNRDSR 159
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCR 357
Y ++ GG L R+++ + G E + L Q + + L +H PR +
Sbjct: 160 YTSFNLNLGGGLVRNDLIGELNGEGAEANF--YGLFYGQGRQHIDNHTLANHNAPRTFSN 217
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
+ +K I+ + VF+G V V R
Sbjct: 218 ENYKGIL-DDRARGVFNGKVVVKR 240
>gi|197247474|ref|YP_002146667.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|440765258|ref|ZP_20944278.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|440767715|ref|ZP_20946691.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
gi|440774165|ref|ZP_20953053.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|197211177|gb|ACH48574.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|436413683|gb|ELP11616.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|436414382|gb|ELP12312.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|436419624|gb|ELP17499.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
Length = 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARKHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|365970160|ref|YP_004951721.1| FeS cluster assembly protein sufD [Enterobacter cloacae EcWSU1]
gi|365749073|gb|AEW73300.1| FeS cluster assembly protein sufD [Enterobacter cloacae EcWSU1]
Length = 436
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 146/342 (42%), Gaps = 48/342 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTS-------M 104
LP+SS++L Q L + + ++ Q +L PSRK E +++T +
Sbjct: 17 LPNSSNALQQWHRLFEAQGNTRSEQAQQHLQQMLRLGLPSRKQENWKYTPLDGLLNGEFV 76
Query: 105 IKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVY-VGSLLGVSDG 163
+ + I P R + +L V LV +DG + L D G + ++D
Sbjct: 77 TRLADISPAQRDALALTVDA----VRLVFVDGQFR------PELSDSTQDCGFEIAINDD 126
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ E +F + A + I V + P+ L +++ D +
Sbjct: 127 RQNLSAPVQPE-----VFLHLTESLARSVTHIRVKRNQRPVKPLLLMHIT---QGADGDE 178
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRH---SYLQN 279
+ ++ R + + EG E +IE +V N+ ++ + L + + ++ H ++
Sbjct: 179 INTAHYRHHLELAEGAEATVIEHYVSL--NEARHFTGARLTMHVAANAQLHHIKLAFENP 236
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
QS + AH + A + + GG + RHN Q G +T ++S + V Q
Sbjct: 237 QSHHFAHNDMQLGQDAAAYSHSFL---LGGAVLRHNTSTQLNGENTTLRINSLAMPVKTQ 293
Query: 340 TQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 294 VCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 332
>gi|407695025|ref|YP_006819813.1| ABC transporter permease [Alcanivorax dieselolei B5]
gi|407252363|gb|AFT69470.1| Permease component of ABC-transporter [Alcanivorax dieselolei B5]
Length = 418
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 131/320 (40%), Gaps = 49/320 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L LR S L + +P RK E +++T + P+T L + D P
Sbjct: 29 LAPLRGDSLSALEAAVFPDRKTEQWKYTS--------LHPLT--DGHLSTAADGALPEPL 78
Query: 131 -------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
LV+ +G +Q + LS LP+GV + G D ++ F
Sbjct: 79 PNLAAHRLVMSNGRLQEA---LSQLPEGVTLRRQAGQRDELLTP-------------FAL 122
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
NG D + V A +V P++L + + RV VL+ G ++ +
Sbjct: 123 YNGAALTDAITLEVAANTEVSAPLHLLLHAASDAPAHCQT------RVEVLLNPGSKLTL 176
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
IE ++G+ N+V + + H LQ++ + HI RQ AS +
Sbjct: 177 IEHYIGQ---GPVLNNAVTVIEARDNASLTHYRLQSEREDTLHISTLLFRQTGASRIDSY 233
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
++ G +L R++V L + EL+ + V+ + ++L ++H +C Q+ K
Sbjct: 234 QLMGGNRLRRNDVRA--LLEKSGAELNMQGVFVARGQSHIDNQLCVEHRVPHCTSNQVFK 291
Query: 362 CIVAHSLGQAVFDGNVKVNR 381
+ G+A+ +G + +++
Sbjct: 292 GLAGEK-GKAILNGRIHIHQ 310
>gi|213612669|ref|ZP_03370495.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 421
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 134/313 (42%), Gaps = 42/313 (13%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRPSSS----LDVSTDAQFPSLVLIDG 136
Q +L P+RK E +++T + SQ IQ S++ L + DA LV +DG
Sbjct: 32 QQMLRLGLPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQIDA--VRLVFVDG 89
Query: 137 -FI-------QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
F+ QNS ++S V D + E +F +
Sbjct: 90 RFMPELSDSTQNSGFDVS-------------VRDERQTLAAPVHPE-----VFLHLTESL 131
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A + I V + P+ L +++ VDS +L ++ R + + EG E +IE +V
Sbjct: 132 AQCVTYIQVRRNQRPTRPLLLMHIT---QGVDSDELNTAHYRHHLTLAEGAEATVIEHYV 188
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTG 308
++ + L + + ++RH L ++ ++ H + T + G
Sbjct: 189 SLTAAK-HFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLG 247
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
+ RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 248 AAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVSD 305
Query: 367 SLGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 306 K-GRAVFNGLINV 317
>gi|410696127|gb|AFV75195.1| FeS assembly protein SufB [Thermus oshimai JL-2]
Length = 468
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQCG------DLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +Y+P G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFREYFAKVVPPEDNKFAALNSAAWSGGSFVYIPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G + R++ +QN S N ++ + +E V+ + G K++ L P TE
Sbjct: 256 GARSRYTTIQNWSTNMYNLVTQRALVYGEAFHEWVDGNLGSKVTMKYPSSYLLEPGARTE 315
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ S + Q QD +++L P + K I + G+A + G VKV
Sbjct: 316 ILSIAFAKTGQHQDTGGKIILTAPHTSGTIVSKSI-SKGEGRASYRGLVKV 365
>gi|55981808|ref|YP_145105.1| SufB protein membrane protein [Thermus thermophilus HB8]
gi|55773221|dbj|BAD71662.1| SufB protein (membrane protein) [Thermus thermophilus HB8]
Length = 468
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQCG------DLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G + R++ +QN S N ++ + +E V+ + G K++ L P +E
Sbjct: 256 GARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSE 315
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ S + Q QD +L+L P + K I + G+A + G VKV
Sbjct: 316 ILSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSI-SKGKGRASYRGLVKV 365
>gi|37526510|ref|NP_929854.1| cysteine desulfurase activator complex subunit SufD [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36785941|emb|CAE14993.1| SufD protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 438
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 127/305 (41%), Gaps = 25/305 (8%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG 136
QT + T +P + E +R+T + + Q T L +S D +V+++G
Sbjct: 48 QTAIKTGFPQFRHEDWRYTPLDKLLNQQYSSKTWELTVAQCEQLAISMDCW--RVVMVNG 105
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIY 196
S L LS+ G Y SLL G+ + Q G++F + A VI
Sbjct: 106 CF--SPL-LSSCEFGPYQLSLLDNKSGLPAPI-------QQGEIFLHLTESLAQQPLVIT 155
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY 256
+ AG E P+YL L++ + S+ L S+ R + V +IE FV +G +
Sbjct: 156 LKAGQVAEKPLYL--LNITSSHC-SEALNSSHYRYHIAVGTNASASVIEHFVSIDGQQPH 212
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNV 316
L +G H L ++ + H + + + G L RHN
Sbjct: 213 MTGGRLTAEVGDNAHFTHIKLGVENSASYHFAHNDIVIGRDAQVKSTSFLLGSGLGRHNT 272
Query: 317 HVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFD 374
V+ G L+S L + D +R L+H +G+C RQLHK IV +AVF+
Sbjct: 273 SVKLNGEGANLSLNSLLLPQGKEVAD--TRTYLEHHKGHCESRQLHKTIVM-DQSKAVFN 329
Query: 375 GNVKV 379
G +KV
Sbjct: 330 GMIKV 334
>gi|116071398|ref|ZP_01468667.1| ABC transporter, membrane component [Synechococcus sp. BL107]
gi|116066803|gb|EAU72560.1| ABC transporter, membrane component [Synechococcus sp. BL107]
Length = 396
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 128/319 (40%), Gaps = 41/319 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
L ++ + L+ P+RK E +R T+ +++ PI+ +++ D +
Sbjct: 10 LAPVQQRGQEALVRLGLPTRKHEAWRLTNLGRLEAVARMPISSVATASDAPPRLDDVVRL 69
Query: 133 LIDGFIQNSALNLSNLPDGVY------VGSLLGVSDGIMKRVSDFISEFQCGD----LFW 182
++DG N L LP+G+ + LG + D++ EF L
Sbjct: 70 VLDGV--NDPLEGVTLPEGLTPLEPKELELALGHTLDRCGWSDDWLIEFNHASAQQLLAL 127
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+ GM VP P+ + + G + RV+++VEE ++
Sbjct: 128 RVRGM---------VP-------PVEITMAAASG---------LIPTRVLLVVEEKAQLE 162
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+++ F + G + + +LEV +G+ ++ H L A+ AV QE S Y
Sbjct: 163 LLQVFSAR-GEAAH--SHLLEVHLGQEAQLNHGVLACADGVASLFAQLAVEQEPRSAYSF 219
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKC 362
V G L R V Q+ T L + ++Q +H+ + + P G QL KC
Sbjct: 220 TSVVQGWSLGRIEPRVVQVDGQASTTLKGLAVADAEQQLAVHTSVCFEGPDGELEQLQKC 279
Query: 363 IVAHSLGQAVFDGNVKVNR 381
+ A +F+G + V R
Sbjct: 280 LAA-GRSHTIFNGAINVPR 297
>gi|384432017|ref|YP_005641377.1| FeS assembly protein SufB [Thermus thermophilus SG0.5JP17-16]
gi|333967485|gb|AEG34250.1| FeS assembly protein SufB [Thermus thermophilus SG0.5JP17-16]
Length = 468
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQCG------DLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G + R++ +QN S N ++ + +E V+ + G K++ L P +E
Sbjct: 256 GARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSE 315
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ S + Q QD +L+L P + K I + G+A + G VKV
Sbjct: 316 ILSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSI-SKGEGRASYRGLVKV 365
>gi|419763520|ref|ZP_14289763.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397743449|gb|EJK90664.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 424
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q LL P+RK E +++T + + + S S + P LV IDG
Sbjct: 34 QQLLRLGLPTRKHEDWKYTPLDALLNGRFVADEGASLSAEQRDALALPLDAWRLVFIDGR 93
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
L D + + D + D + ++F + A + I V
Sbjct: 94 YH------PQLSDELAASGVEVSVDNQRHHLPDALQP----EVFLHLTESLAQTVTRIRV 143
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P +++ P+ L +++ + L ++ R + +E G E I+E ++ ++
Sbjct: 144 PRNRRLDKPLLLMHIT---SGLAGDALNTAHYRHHLALESGAEATIVEHYLSL-NEQPHF 199
Query: 258 ANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
L + + ++H ++ +S + AH R +A + GG++ RH
Sbjct: 200 TGGRLTMTVADNAHLQHIKLAFENARSYHFAHNDLLLGRDASAFSSSFL---LGGQVLRH 256
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
+ G ++ L+S + V ++ D SR LDH GYC RQLHK IV+ G+AV
Sbjct: 257 QTSTRLDGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVSDK-GRAV 313
Query: 373 FDGNVKV 379
F+G + V
Sbjct: 314 FNGLINV 320
>gi|381191357|ref|ZP_09898867.1| SufB protein membrane protein [Thermus sp. RL]
gi|380450717|gb|EIA38331.1| SufB protein membrane protein [Thermus sp. RL]
Length = 468
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G + R++ +QN S N ++ + +E V+ + G K++ L P +E
Sbjct: 256 GARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSE 315
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ S + Q QD +L+L P + K I + G+A + G VKV
Sbjct: 316 ILSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSI-SKGEGRASYRGLVKV 365
>gi|46199790|ref|YP_005457.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|46197417|gb|AAS81830.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
Length = 468
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQCG------DLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G + R++ +QN S N ++ + +E V+ + G K++ L P +E
Sbjct: 256 GARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSE 315
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ S + Q QD +L+L P + K I + G+A + G VKV
Sbjct: 316 ILSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSI-SKGEGRASYRGLVKV 365
>gi|456355250|dbj|BAM89695.1| SufD, needed for fhuF Fe-S center production/stability [Agromonas
oligotrophica S58]
Length = 440
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 131/326 (40%), Gaps = 26/326 (7%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
LP + +R + T P R+ E +++TD + + P ++ A
Sbjct: 25 LPGTGKVADIRREAFAAFERTGLPHRRIEEWKYTDLRALVREVLPLAGLPDAAALSRARA 84
Query: 127 QF--------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
LVLIDG + +LS LP GV V +L V D + +
Sbjct: 85 AVASVAIEGATKLVLIDGVVAADLSDLSALPAGVTVRTLRAVLDDQSNDARGDLLLTKAS 144
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D S+N A D VI V G ++ P+ L +++ S + S+ R V +G
Sbjct: 145 DPMLSLNAALATDGVVITVADGAQLSAPLQLIHVATAA---KSARYSRSHLR----VGQG 197
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
++E + +G Y AN + +G + H L + +A ++ V S
Sbjct: 198 ARATLVENSIAVDGAAAYQANDAAVISVGDDAALSHVRLMRDATDALNVSSELVTVGARS 257
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
L +++GG +SR V G +E ++ +LL Q DL L++DH C
Sbjct: 258 KLSLFNMTSGGAVSRLQVFFTMAGEGSELIVNGVNLLRDKQHGDLT--LVVDHAVPGCTS 315
Query: 357 RQLHKCIV---AHSLGQAVFDGNVKV 379
R+ + ++ AHS VF G + V
Sbjct: 316 RENFRAVLDDRAHS----VFQGRIIV 337
>gi|386361339|ref|YP_006059584.1| FeS assembly protein SufB [Thermus thermophilus JL-18]
gi|383510366|gb|AFH39798.1| FeS assembly protein SufB [Thermus thermophilus JL-18]
Length = 468
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G + R++ +QN S N ++ + +E V+ + G K++ L P +E
Sbjct: 256 GARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSE 315
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ S + Q QD +L+L P + K I + G+A + G VKV
Sbjct: 316 ILSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSI-SKGEGRASYRGLVKV 365
>gi|317967990|ref|ZP_07969380.1| ABC transporter, membrane component [Synechococcus sp. CB0205]
Length = 412
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 27/294 (9%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLP 149
PS + E +RFTD S++++ + +L L DG Q+ L LP
Sbjct: 46 PSSRSEDWRFTDLSLLQALPLAAAQPAQPTLAAGGSVLRLQL---DG--QSDPLAGVTLP 100
Query: 150 DGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFW--SINGMGAPDLGVIYVPAGCKVENPI 207
G+ V S ++ G+ ++ C W +N A + + V K
Sbjct: 101 AGLEVLSEAELAQGL----GHTLAATACQQ-HWPVELNQASATQVLALRV----KSRASA 151
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
L+ +S G + LP+ R+++++EE ++ + + E + V+E +
Sbjct: 152 ALELVSASSGGM----LPL---RILLVLEEKAQLDLSQLI---EARAAGLVSLVIEAHLA 201
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 327
+ ++RH + +AA AV QE S L V+ G L+RH + Q+ +
Sbjct: 202 RSAQLRHGLVAFGQSDAALFSHIAVEQEPESQAALSNVAAGWGLARHEPRLVQVQGQAHS 261
Query: 328 ELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L L+ Q D HS + P G Q+HK + A G++VF+G V+V R
Sbjct: 262 LLRGLQLVGGQQIADTHSFVQFSGPEGELDQVHKAVAAGQ-GRSVFNGAVRVPR 314
>gi|449053644|ref|ZP_21732558.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae hvKP1]
gi|448875613|gb|EMB10625.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae hvKP1]
Length = 424
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q LL P+RK E +++T + + + S S + P LV IDG
Sbjct: 34 QQLLRLGLPTRKHEDWKYTPLDALLNGRFVADEGASLSAEQRDALALPLDAWRLVFIDGR 93
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
L D + + D + D + ++F + A + I V
Sbjct: 94 YH------PQLSDELAASGVEVSVDNQRHHLPDALQP----EVFLHLTESLAQTVTRIRV 143
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P +++ P+ L +++ + L ++ R + +E G E I+E ++ ++
Sbjct: 144 PRNRRLDKPLLLMHIT---SGLAGDALNTAHYRHHLALESGAEATIVEHYLSL-NEQPHF 199
Query: 258 ANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
L + + ++H ++ +S + AH R +A + GG++ RH
Sbjct: 200 TGGRLTMTVADNAHLQHIKLAFENARSYHFAHNDLLLGRDASAFSSSFL---LGGQVLRH 256
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
+ G ++ L+S + V ++ D SR LDH GYC RQLHK IV+ G+AV
Sbjct: 257 QTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVSDK-GRAV 313
Query: 373 FDGNVKV 379
F+G + V
Sbjct: 314 FNGLINV 320
>gi|254505870|ref|ZP_05118015.1| FeS assembly protein SufD [Vibrio parahaemolyticus 16]
gi|219551093|gb|EED28073.1| FeS assembly protein SufD [Vibrio parahaemolyticus 16]
Length = 411
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 128/313 (40%), Gaps = 47/313 (15%)
Query: 86 STPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS------LDVSTDAQFPSLVLIDGFIQ 139
S PS K+E +++T S +QP S+ L + DA LV DG
Sbjct: 23 SVGLPSAKEEGWKYTPLEQFYSLPLQPAALQSAENISYEGLSLGIDAY--RLVFFDGHF- 79
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRV-SDFISEFQCGDLFWSINGMGAPDLGVIYVP 198
+ S+ V V L ++ V ++ +S D F +N A +I V
Sbjct: 80 --SARCSDWIPKVRVTPL-----NVLNAVETNELSRSVRADAFTYLNDATASGGVLIEVE 132
Query: 199 AGCKVENPIYLKYLSV-EGGNVDSKK-----LPISNPRVV---VLVEEGGEVGIIEEFVG 249
+V PIYL ++S + G V S + P+S V+ + +E+GG V +
Sbjct: 133 PNTRVTKPIYLLHISSGQNGEVCSYRHHIEMAPLSELEVIEHHISLEQGGGVTL------ 186
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
S L IG+G +H+ L +S H +R + + V G
Sbjct: 187 ----------SRLTSYIGEGANYQHTKLIEESNQQHHFGHNDIRLQRDAKANSTAVLLSG 236
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHS 367
L RH + G + E ++S + +QT D SR L H +CR Q+HK I+
Sbjct: 237 LLVRHQTSSELSGDNGELAMNSVAMPRDEQTFD--SRTYLKHNAPHCRSEQMHK-IIGRD 293
Query: 368 LGQAVFDGNVKVN 380
G AVFDG + V+
Sbjct: 294 KGNAVFDGMIYVD 306
>gi|82777160|ref|YP_403509.1| cysteine desulfurase [Shigella dysenteriae Sd197]
gi|309788336|ref|ZP_07682940.1| feS assembly protein SufD [Shigella dysenteriae 1617]
gi|81241308|gb|ABB62018.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308923718|gb|EFP69221.1| feS assembly protein SufD [Shigella dysenteriae 1617]
Length = 423
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDVLALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L V++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVPALSDVTEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPAKPLLLMHIT---QGVTGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLAENATAFSHSFL---LGGT 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+ + V
Sbjct: 309 GRAVFNCLINV 319
>gi|384440329|ref|YP_005655053.1| Fe-S cluster assembly ABC transporter permease [Thermus sp.
CCB_US3_UF1]
gi|359291462|gb|AEV16979.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermus sp. CCB_US3_UF1]
Length = 468
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +Y+P G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYIPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G + R++ +QN S N ++ + +E ++ + G K++ L P TE
Sbjct: 256 GARSRYTTIQNWSTNMYNLVTQRALVYGDAFHEWLDGNLGSKVTMKYPSSYLLEPGARTE 315
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ S + Q QD ++++L P + K I + G+A + G VKV
Sbjct: 316 ILSIAFAKTGQHQDTGAKIILGAPHTSGTIVSKSI-SKGEGRASYRGLVKV 365
>gi|416268376|ref|ZP_11642113.1| Iron-sulfur cluster assembly protein SufD [Shigella dysenteriae CDC
74-1112]
gi|420380186|ref|ZP_14879653.1| feS assembly protein SufD [Shigella dysenteriae 225-75]
gi|320175142|gb|EFW50253.1| Iron-sulfur cluster assembly protein SufD [Shigella dysenteriae CDC
74-1112]
gi|391302482|gb|EIQ60339.1| feS assembly protein SufD [Shigella dysenteriae 225-75]
Length = 423
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 66/320 (20%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQ-------IQPITRPSSSLDVSTDAQFPSLVLIDG--- 136
T P+RK E +++T + +SQ I P R + +L + LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDAFALTLDA----VRLVFVDGRYV 94
Query: 137 -----FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
I+ S +S LPD + L +++ + + V+
Sbjct: 95 PALSDAIEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH--------------- 139
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
I V G + P+ L Y++ V +++ ++ R + + EG E +IE
Sbjct: 140 ---------IAVKRGQRPAKPLLLMYIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIE 187
Query: 246 EFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYE 301
FV ND ++ + + + ++H L + S + AH TA +
Sbjct: 188 HFVSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHS 245
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQL 359
+ GG + R+N Q G ++ ++S + V ++ D +R L+H +G+C RQL
Sbjct: 246 FL---LGGAVLRNNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQL 300
Query: 360 HKCIVAHSLGQAVFDGNVKV 379
HK IV+ G+AVF+G + V
Sbjct: 301 HKTIVSDK-GRAVFNGLINV 319
>gi|303235596|ref|ZP_07322203.1| putative FeS assembly protein SufD [Prevotella disiens FB035-09AN]
gi|302484043|gb|EFL47031.1| putative FeS assembly protein SufD [Prevotella disiens FB035-09AN]
Length = 447
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 138/317 (43%), Gaps = 36/317 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQF 128
L K+RD + + + +P++K E +++TD + + +Q + P + D S
Sbjct: 26 LNKVRDKAFEDFKTQGFPTKKVERYKYTDIPKLFAPDYGLNLQRLETPINPYD-SFKCDV 84
Query: 129 PSLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGVS-------DGIMKRVSDFISEFQ 176
P+L F+ N LP +G+ + S+ + + R++D
Sbjct: 85 PNLSTSLYFVVNDQFYNKQLPKVQLNEGIVIDSICNAAKIYPELLEQHYARIAD-----T 139
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D + N M A D IYVP G K + I + +++ NV+ + N RV++++E
Sbjct: 140 SKDALTAFNTMLAQDGLFIYVPKGIKADRTI--QVINILRSNVN----LMVNRRVLIIIE 193
Query: 237 EGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
EG E ++ F +D + V+E + K+ + L+ L + + Q+
Sbjct: 194 EGAEASML--FCDDSTDDRNFLTTQVIEAYVADNAKLELNCLEETHLKNVRVSNVYIEQQ 251
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S ++ ++R+ + + G +E L+ +++D+ Q + + +++H
Sbjct: 252 KNSRVSHNIITLHNGVTRNKLDLTFRGEGSECFLNG--CVIADKHQHVDNNTVINHAVSN 309
Query: 356 C--RQLHKCIV-AHSLG 369
C QL+K ++ H++G
Sbjct: 310 CSSNQLYKYVLDDHAVG 326
>gi|253688824|ref|YP_003018014.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755402|gb|ACT13478.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 448
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 128/309 (41%), Gaps = 33/309 (10%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVSTDAQFPSLVLID 135
Q ++ P RK E +++T + S++ PS +L + D+ LV +D
Sbjct: 52 QDVVRLGLPHRKHEHWKYTPLDGLLSNEFVAPQAPSLDRAAVDALAFAVDSW--RLVFVD 109
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G LS+ G Y D R + ++F + A +I
Sbjct: 110 GVFN---AELSDSAWGPYQ------VDVQASRAQGILPAAIQSEVFLHLTESLASTSTLI 160
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+ AG + E P+YL ++S + + L + R + VE G IIE +V +
Sbjct: 161 RLAAGQQAEKPLYLLHIS----SSQAAALNTVHHRHHLNVERGASAEIIEHYVSLD-EHA 215
Query: 256 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + L V + +V H ++ S + AH R + + G L+
Sbjct: 216 HFTGARLTVNAAENSQVSHYKLAFEAAASYHFAHNDLVLARDARVRSHSFL---LGAGLT 272
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVAHSLGQ 370
RH+ Q G T ++S L V + D +R L+H +GY RQLHK IV + +
Sbjct: 273 RHHTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV-NDRAR 329
Query: 371 AVFDGNVKV 379
AVF+G +KV
Sbjct: 330 AVFNGMIKV 338
>gi|168233562|ref|ZP_02658620.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472087|ref|ZP_03078071.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194458451|gb|EDX47290.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332336|gb|EDZ19100.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 423
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 46/341 (13%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
Q S++ L + DA LV +DG + L D + G
Sbjct: 64 QQCATLSAAQRDALALQIDA--VRLVFVDGRF------MPELSDSTQ-------NSGFDV 108
Query: 167 RVSDFISEFQCGD------LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
V D E Q D +F + A + I V + P+ L +++ VD
Sbjct: 109 SVRD---ERQTLDAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QGVD 162
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+L ++ R + + EG E +IE +V ++ + L + + ++RH L +
Sbjct: 163 GDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLAFE 221
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
+ ++ H + T + G + RH+ Q G + L+S + V ++
Sbjct: 222 NASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEV 281
Query: 341 QDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 282 CD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|124022015|ref|YP_001016322.1| ABC transporter [Prochlorococcus marinus str. MIT 9303]
gi|123962301|gb|ABM77057.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9303]
Length = 416
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
++E + K+ H L AA + AV QE +S LV V G + RH + Q
Sbjct: 200 LVEAHLQSEAKLSHGLLAFGHPQAALLAHLAVEQEPSSDVSLVSVCQGWGVIRHEPQLIQ 259
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
L +++L + L+ ++Q D HS + + P G QLHK +VA G++VF+G V+V
Sbjct: 260 LNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHK-VVAAGHGRSVFNGVVQVP 318
Query: 381 R 381
R
Sbjct: 319 R 319
>gi|218294673|ref|ZP_03495527.1| FeS assembly protein SufB [Thermus aquaticus Y51MC23]
gi|218244581|gb|EED11105.1| FeS assembly protein SufB [Thermus aquaticus Y51MC23]
Length = 468
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFREYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G K R++ +QN S N ++ + +E ++ + G K++ L P TE
Sbjct: 256 GAKSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWLDGNLGSKVTMKYPSSYLLEPGARTE 315
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ S + Q QD +++++ P + K I + G+A + G VKV
Sbjct: 316 ILSIAFAKTGQHQDTGAKIVMAAPHTSGTIVSKSI-SKGEGRASYRGLVKV 365
>gi|331653081|ref|ZP_08354086.1| FeS assembly protein SufD [Escherichia coli M718]
gi|331049179|gb|EGI21251.1| FeS assembly protein SufD [Escherichia coli M718]
Length = 423
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 137/312 (43%), Gaps = 50/312 (16%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS 146
T P+RK E +++T L+ T+ QF S+V Q AL L+
Sbjct: 39 TGLPTRKHENWKYT------------------PLEGLTNIQFVSIVGEISPQQRDALALT 80
Query: 147 ------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLG 193
DG YV +L ++G VS I++ + G ++F + A +
Sbjct: 81 LDAVRLVFVDGRYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSVT 138
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV N
Sbjct: 139 HIAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--N 193
Query: 254 DC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGG 309
D ++ + + + ++H L + S + AH TA + + GG
Sbjct: 194 DARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL---LGG 250
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHS 367
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 251 AVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK 308
Query: 368 LGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 -GRAVFNGLINV 319
>gi|227504375|ref|ZP_03934424.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium striatum ATCC 6940]
gi|227199023|gb|EEI79071.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium striatum ATCC 6940]
Length = 481
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G V+ P+ Y + N+ + R +++VEE V IE N
Sbjct: 202 VYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVEEDAYVHYIEGCTAPIYNS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
V+E+V+ KGG+ R++ +QN S N ++ + E E V+ + G K++
Sbjct: 255 DSLHTGVIEIVVKKGGRCRYTTIQNWSTNVYNLVTQRAKVEEGGTMEWVDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
G + E+ S Q QD S+++ PR + K VA + G+A +
Sbjct: 315 YPSCWLTGEHAKGEVLSLAFAGEGQVQDTGSKMVHMAPRTSSNIVSKS-VARNGGRAAYR 373
Query: 375 GNVKVN 380
G V+VN
Sbjct: 374 GLVQVN 379
>gi|348028805|ref|YP_004871491.1| cysteine desulfurase activator SufB [Glaciecola nitratireducens
FR1064]
gi|347946148|gb|AEP29498.1| cysteine desulfurase activator SufB [Glaciecola nitratireducens
FR1064]
Length = 419
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 131/318 (41%), Gaps = 29/318 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L +R + L + WP + E +RFT + IK R + ++ + + P
Sbjct: 19 LAPMRQQALSKLQTQGWPHARSEEWRFTPLTSIKE-------RSVDASSIAGNYEVPEIE 71
Query: 131 ------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWS 183
LV +DG + + ++S LP G+ V +L + +++ + +F
Sbjct: 72 GLNAIDLVFVDGLLVTNLSDIS-LPSGLSVYALSDAPSAVQSKITSLFGHVKPARHVFGL 130
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N + V ++ P+ + L+ + + ++ RV+V + + ++ +
Sbjct: 131 VNDALCQQGIYVEVDEDASIDTPLRIVNLATKDCD--------AHTRVLVNLGKHSQLKV 182
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELV 303
IE GN + + E VIG+ + H + A + + + ++
Sbjct: 183 IEH---GSGNVASFTTAFAEYVIGEKASLEHYRFALFTGAAKQVGGSHFSLQHSANLNST 239
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCI 363
VS G +LSR +V + G ++++ +LL + DLHS + P G + + I
Sbjct: 240 LVSYGSELSRLDVDIIHAGEHANAKMNAIYLLAEGEFFDLHSTIEHAMPNGTTEENARGI 299
Query: 364 VAHSLGQAVFDGNVKVNR 381
+ +AVF G + ++R
Sbjct: 300 IGDR-ARAVFSGRIHIHR 316
>gi|389809674|ref|ZP_10205396.1| FeS assembly protein SufD [Rhodanobacter thiooxydans LCS2]
gi|388441573|gb|EIL97835.1| FeS assembly protein SufD [Rhodanobacter thiooxydans LCS2]
Length = 439
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 31/286 (10%)
Query: 59 SLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
S P +S L P P L + R + + P + E +++T + +
Sbjct: 6 STPLVASLLDAPPPASGIAWLDEARRENRAAFAAGGLPGARVEAWKYTALRGLAQRRFAA 65
Query: 113 ITRPSSSLDVSTDA------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI-- 164
+++ DV A P LV ++G + + LPDG+ SL +S +
Sbjct: 66 GDAAAATRDVDAAAFALPGVDGPRLVFVNGVFRADLSTAAALPDGL---SLQPLSQALRD 122
Query: 165 --------MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
+ R + + GD F +N A D V+ V A ++ P+ L ++ G
Sbjct: 123 DAEPLRFALSRAALVGHVREGGDAFVQVNAASATDGVVLRVAAHARIAAPVQLVFV---G 179
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
D++ + R +V + EG + ++E VG G V + V+ +G ++ H
Sbjct: 180 AAADAEL--AWHARNLVELGEGASLELVEHHVGS-GEQAQLVTLVGDFVLHEGAQLHHVV 236
Query: 277 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLG 322
LQN + I+ + +R + +L + GG L RH++ + +G
Sbjct: 237 LQNAATTTNLIRRSGLRLHARAQMQLHVLELGGALVRHDLQAELVG 282
>gi|320449481|ref|YP_004201577.1| FeS assembly protein SufB [Thermus scotoductus SA-01]
gi|320149650|gb|ADW21028.1| FeS assembly protein SufB [Thermus scotoductus SA-01]
Length = 468
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +Y+P G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYIPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
G + R++ +QN S N ++ + +E ++ + G K++ L P TE
Sbjct: 256 GARSRYTTIQNWSTNMYNLVTQRALVYGDAFHEWLDGNLGSKVTMKYPSSYLLEPGARTE 315
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ S + Q QD ++++L P + K I + G+A + G VKV
Sbjct: 316 ILSIAFAKTGQHQDTGAKIILGAPHTSGTIVSKSI-SKGEGRASYRGLVKV 365
>gi|421588792|ref|ZP_16034033.1| FeS assembly protein SufD [Rhizobium sp. Pop5]
gi|403706434|gb|EJZ21697.1| FeS assembly protein SufD [Rhizobium sp. Pop5]
Length = 424
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 137/336 (40%), Gaps = 40/336 (11%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ LP + LRD L P+R+ E + +TD + T
Sbjct: 15 ALIEAFNQQIGELPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------T 68
Query: 115 RPSSSLDVSTDAQFP------SLVLIDGFIQNSA----LNLSNLPDGVYVGSLLGVSDGI 164
P + D ++A P L +I G A L +S + + GS +DG+
Sbjct: 69 VPPQAGDAGSEALEPLVTGSSVLAVIQGHSSQKAAADGLGISAYSEHLINGS---TADGL 125
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
SD D ING D V+ VPA +E P+ ++++ GG + ++ L
Sbjct: 126 DALGSD--------DAIGRINGSFVRDGYVVDVPAETVLEEPLEIQFIHA-GGQIHTR-L 175
Query: 225 PIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
P+S P V + +IE G D + + V ++ +G+G ++ LQ Q
Sbjct: 176 PVSFGPGV--------KATVIERHRAVTG-DAAFVSHVSDITVGEGTELTWIILQQQGAE 226
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
H+ V + L ++ GGK+ R +H++ G + L +LL ++ D+
Sbjct: 227 DTHLGQIRVDLGADAKLRLFVINAGGKMVRQELHIKVTGEGADLTLRGINLLGAESHTDV 286
Query: 344 HSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
L D P ++ + +V + VF G ++V
Sbjct: 287 TMVLGHDVPHTGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|416507520|ref|ZP_11735468.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416524104|ref|ZP_11741317.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416528381|ref|ZP_11743831.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416535727|ref|ZP_11747981.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416554035|ref|ZP_11758063.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416563010|ref|ZP_11762596.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416571481|ref|ZP_11766715.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|417462636|ref|ZP_12164570.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|353631504|gb|EHC78794.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|363549030|gb|EHL33388.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363553530|gb|EHL37778.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363553698|gb|EHL37944.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363562221|gb|EHL46327.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363565935|gb|EHL49959.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363572214|gb|EHL56107.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|363574011|gb|EHL57884.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
Length = 423
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 144/343 (41%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPKRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|422832844|ref|ZP_16880912.1| FeS cluster assembly protein sufD [Escherichia coli E101]
gi|371610860|gb|EHN99387.1| FeS cluster assembly protein sufD [Escherichia coli E101]
Length = 423
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 62/318 (19%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDG----- 136
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVPA 96
Query: 137 ---FIQNSALNLS------NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
++S +S LPD + L +++ + + V+
Sbjct: 97 LSDATEDSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTH----------------- 139
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V G + P+ L +++ V +++ ++ R + + EG E +IE F
Sbjct: 140 -------IAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHF 189
Query: 248 VGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELV 303
V ND ++ + + + ++H L + S + AH TA + +
Sbjct: 190 VSL--NDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSFL 247
Query: 304 EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHK 361
GG + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK
Sbjct: 248 ---LGGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHK 302
Query: 362 CIVAHSLGQAVFDGNVKV 379
IV+ G+AVF+G + V
Sbjct: 303 TIVSDK-GRAVFNGLINV 319
>gi|430746002|ref|YP_007205131.1| FeS assembly protein SufD [Singulisphaera acidiphila DSM 18658]
gi|430017722|gb|AGA29436.1| FeS assembly protein SufD [Singulisphaera acidiphila DSM 18658]
Length = 452
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 126/309 (40%), Gaps = 36/309 (11%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP--ITRPSSSLDVSTDA 126
+P LQ R + + S P P+ +DE +R TD +K P + PS+ + D
Sbjct: 30 EPKWLQDRRREAFEYFRSNPLPTSRDEEWRRTDIRALKLDAFAPPALQEPSAEARAAIDP 89
Query: 127 QFPSLV--LIDGFIQNSA-----LNLSNLPDGVYVGSLLGVSD--GIMKR--VSDFISEF 175
+ +L G Q +A + + L + V V D ++KR ++D +S
Sbjct: 90 VWKTLSTHYATGIEQVNATVTRRADPAKLGGAILVDLAQAVKDHPELLKRWLLTDVVSPR 149
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY-LKYLSVEGGNVDSKKLPISNPRVVVL 234
+ D F +++ ++YVP G KVE P++ L L+ EG + +++
Sbjct: 150 E--DAFSALHAAFWTGGTLLYVPKGVKVEAPLFSLVGLAREG--------QVDFDHTLIV 199
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWAN-SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
+E+G E + E G+E D + +E+++G+ K+R +QN H
Sbjct: 200 LEDGAEASFVRETTGRERADAPGLHVGAVELIVGREAKLRFVNIQNWDAGTWHFSRERAL 259
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
+G + G +L++ N V G ++ +++ Q H
Sbjct: 260 VGADAGLQWTVGGLGSRLAKVNQEVALAGKGSKAQVNGVMFTTGRQ-----------HLA 308
Query: 354 GYCRQLHKC 362
+ RQ H+
Sbjct: 309 YFTRQDHQA 317
>gi|409437499|ref|ZP_11264613.1| putative iron-sulfur cluster assembly protein [Rhizobium
mesoamericanum STM3625]
gi|408750927|emb|CCM75771.1| putative iron-sulfur cluster assembly protein [Rhizobium
mesoamericanum STM3625]
Length = 424
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 155/360 (43%), Gaps = 52/360 (14%)
Query: 33 VSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSR 92
+++QTT Q T ++ +I+ + LP S + +RD L P+R
Sbjct: 1 MNMQTTSRQ-TAAEAALIEAFNNQIGELPGDGSVIA-------IRDRLLDDLKRAGLPTR 52
Query: 93 KDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN-LSNLPDG 151
+ E + +TD + ++ I P+ + D ++A+ P L++ Q+S L+ + +PD
Sbjct: 53 RIEAWHYTDLKTL----LRAI--PAQAGDAGSEARDP---LVE---QSSVLSVIQGVPD- 99
Query: 152 VYVGSLLGVSDGIMKRVSDFISEFQCG------------DLFWSINGMGAPDLGVIYVPA 199
L DG+ +SD+ + G D ING D VI VPA
Sbjct: 100 -----LRASVDGL--DISDYAALLSNGTAATSLGALGSDDAIGRINGSFVRDGYVIDVPA 152
Query: 200 GCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWAN 259
G +E P+ +++ V G +LP++ V + +IE + +D +
Sbjct: 153 GADLEAPVEIQF--VHAGGQTHTRLPVNFGANV-------KATVIERHLAVT-SDAALVS 202
Query: 260 SVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 319
V ++ +G+G ++ +Q Q + H+ + + +L ++ GGKL R +H++
Sbjct: 203 HVSDITVGEGSELTWIIIQQQGADDTHLGQIRIDLGADAKLKLFVINAGGKLVRQELHIK 262
Query: 320 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
G + L +LL ++ D+ L + P ++ + +V + VF G ++V
Sbjct: 263 VTGEGADLTLRGINLLGAETHTDVTMVLGHNVPHTGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|432481025|ref|ZP_19722983.1| FeS cluster assembly protein sufD [Escherichia coli KTE210]
gi|431007682|gb|ELD22493.1| FeS cluster assembly protein sufD [Escherichia coli KTE210]
Length = 423
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG ++
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDA--VRLVFVDGRYVSA 96
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGC 201
LS+ +G G + ++D + V D I ++F + A + I V
Sbjct: 97 ---LSDATEGS--GYEVSINDD-RQGVPDAIQ----AEVFLHLTESLAQSVTHIAVKRVQ 146
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANS 260
+ P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 147 RPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGA 201
Query: 261 VLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 202 RFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTS 258
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDG 375
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 259 TQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNG 315
Query: 376 NVKV 379
+ V
Sbjct: 316 LINV 319
>gi|304383862|ref|ZP_07366319.1| FeS assembly protein SufD [Prevotella marshii DSM 16973]
gi|304334940|gb|EFM01213.1| FeS assembly protein SufD [Prevotella marshii DSM 16973]
Length = 455
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 35/311 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----------IQPI-TRPSSSL 120
+ +R+ + + P++K E +++TD + + I P T P
Sbjct: 35 MNAMREQAFEDFKRIGIPTKKVEHYKYTDMQALFAPDYGLNLNRIDIPINPYETFPCDVP 94
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CG 178
++ST F V+ D F + L + LP GV V SL V++ + V + + C
Sbjct: 95 NLSTTLYF---VINDRFY-DKHLPAATLPAGVIVDSLKKVAEEHPELVEKYYGKLAATCD 150
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D ++N M A D +YVP ++ I + L++ +VD ++N RVV+ +EEG
Sbjct: 151 DSMTALNTMLAQDGLFVYVPKNVRLNRCI--QVLNLLRSDVD----LMANRRVVIALEEG 204
Query: 239 GEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
E + F +D + V+E +G + L+ + QE
Sbjct: 205 AEAKFL--FCDHAADDRQFLTTQVIEAYVGSNASLDLYCLEETHERNVRVSNVYFAQEAN 262
Query: 298 S--GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PR 353
S + ++ + G +R++ H+ G E LS +++D+ Q + + ++DH PR
Sbjct: 263 SRLNHNVITLHNGS--TRNSTHLVFKGEGAECHLSG--CVIADKHQHVDNNTVIDHQVPR 318
Query: 354 GYCRQLHKCIV 364
+L+K ++
Sbjct: 319 CTSNELYKYVL 329
>gi|422829010|ref|ZP_16877179.1| FeS cluster assembly protein sufD [Escherichia coli B093]
gi|371611657|gb|EHO00178.1| FeS cluster assembly protein sufD [Escherichia coli B093]
Length = 423
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 139/313 (44%), Gaps = 52/313 (16%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSS-------QIQPITRPSSSLDVSTDAQFPSLVLIDGFIQ 139
T P+RK E +++T + +S +I P R +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSRFVSNAGEISPQQR--DALALTLDA--VRLVFVDG--- 91
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDL 192
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ------------RYVPALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAQSV 137
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV
Sbjct: 138 THIAVKRGQRPAKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL-- 192
Query: 253 NDC-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTG 308
ND ++ + + + ++H L + S + AH TA + + G
Sbjct: 193 NDARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LG 249
Query: 309 GKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAH 366
G + RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 250 GAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSD 307
Query: 367 SLGQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 308 K-GRAVFNGLINV 319
>gi|417415917|ref|ZP_12159460.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353621341|gb|EHC71184.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
Length = 423
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHFQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAVVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|218705179|ref|YP_002412698.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UMN026]
gi|293405179|ref|ZP_06649171.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli FVEC1412]
gi|298380822|ref|ZP_06990421.1| Fe-S cluster assembly protein SufD [Escherichia coli FVEC1302]
gi|300898538|ref|ZP_07116871.1| FeS assembly protein SufD [Escherichia coli MS 198-1]
gi|417586549|ref|ZP_12237321.1| feS assembly protein SufD [Escherichia coli STEC_C165-02]
gi|419932214|ref|ZP_14449543.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 576-1]
gi|432353592|ref|ZP_19596866.1| FeS cluster assembly protein sufD [Escherichia coli KTE2]
gi|432401943|ref|ZP_19644696.1| FeS cluster assembly protein sufD [Escherichia coli KTE26]
gi|432426116|ref|ZP_19668621.1| FeS cluster assembly protein sufD [Escherichia coli KTE181]
gi|432460735|ref|ZP_19702886.1| FeS cluster assembly protein sufD [Escherichia coli KTE204]
gi|432475857|ref|ZP_19717857.1| FeS cluster assembly protein sufD [Escherichia coli KTE208]
gi|432517746|ref|ZP_19754938.1| FeS cluster assembly protein sufD [Escherichia coli KTE228]
gi|432537844|ref|ZP_19774747.1| FeS cluster assembly protein sufD [Escherichia coli KTE235]
gi|432631416|ref|ZP_19867345.1| FeS cluster assembly protein sufD [Escherichia coli KTE80]
gi|432641062|ref|ZP_19876899.1| FeS cluster assembly protein sufD [Escherichia coli KTE83]
gi|432666048|ref|ZP_19901630.1| FeS cluster assembly protein sufD [Escherichia coli KTE116]
gi|432770644|ref|ZP_20004988.1| FeS cluster assembly protein sufD [Escherichia coli KTE50]
gi|432774770|ref|ZP_20009052.1| FeS cluster assembly protein sufD [Escherichia coli KTE54]
gi|432886623|ref|ZP_20100712.1| FeS cluster assembly protein sufD [Escherichia coli KTE158]
gi|432912720|ref|ZP_20118530.1| FeS cluster assembly protein sufD [Escherichia coli KTE190]
gi|432961698|ref|ZP_20151488.1| FeS cluster assembly protein sufD [Escherichia coli KTE202]
gi|433018639|ref|ZP_20206885.1| FeS cluster assembly protein sufD [Escherichia coli KTE105]
gi|433053186|ref|ZP_20240381.1| FeS cluster assembly protein sufD [Escherichia coli KTE122]
gi|433063072|ref|ZP_20250005.1| FeS cluster assembly protein sufD [Escherichia coli KTE125]
gi|433067964|ref|ZP_20254765.1| FeS cluster assembly protein sufD [Escherichia coli KTE128]
gi|433158711|ref|ZP_20343559.1| FeS cluster assembly protein sufD [Escherichia coli KTE177]
gi|433178324|ref|ZP_20362736.1| FeS cluster assembly protein sufD [Escherichia coli KTE82]
gi|218432276|emb|CAR13166.1| component of SufBCD complex [Escherichia coli UMN026]
gi|291427387|gb|EFF00414.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli FVEC1412]
gi|298278264|gb|EFI19778.1| Fe-S cluster assembly protein SufD [Escherichia coli FVEC1302]
gi|300357802|gb|EFJ73672.1| FeS assembly protein SufD [Escherichia coli MS 198-1]
gi|345338052|gb|EGW70483.1| feS assembly protein SufD [Escherichia coli STEC_C165-02]
gi|388418387|gb|EIL78197.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 576-1]
gi|430875833|gb|ELB99354.1| FeS cluster assembly protein sufD [Escherichia coli KTE2]
gi|430926773|gb|ELC47360.1| FeS cluster assembly protein sufD [Escherichia coli KTE26]
gi|430956456|gb|ELC75130.1| FeS cluster assembly protein sufD [Escherichia coli KTE181]
gi|430989448|gb|ELD05902.1| FeS cluster assembly protein sufD [Escherichia coli KTE204]
gi|431005798|gb|ELD20805.1| FeS cluster assembly protein sufD [Escherichia coli KTE208]
gi|431051794|gb|ELD61456.1| FeS cluster assembly protein sufD [Escherichia coli KTE228]
gi|431069758|gb|ELD78078.1| FeS cluster assembly protein sufD [Escherichia coli KTE235]
gi|431170884|gb|ELE71065.1| FeS cluster assembly protein sufD [Escherichia coli KTE80]
gi|431183327|gb|ELE83143.1| FeS cluster assembly protein sufD [Escherichia coli KTE83]
gi|431201423|gb|ELF00120.1| FeS cluster assembly protein sufD [Escherichia coli KTE116]
gi|431315844|gb|ELG03743.1| FeS cluster assembly protein sufD [Escherichia coli KTE50]
gi|431318485|gb|ELG06180.1| FeS cluster assembly protein sufD [Escherichia coli KTE54]
gi|431416668|gb|ELG99139.1| FeS cluster assembly protein sufD [Escherichia coli KTE158]
gi|431440149|gb|ELH21478.1| FeS cluster assembly protein sufD [Escherichia coli KTE190]
gi|431474654|gb|ELH54460.1| FeS cluster assembly protein sufD [Escherichia coli KTE202]
gi|431533577|gb|ELI10076.1| FeS cluster assembly protein sufD [Escherichia coli KTE105]
gi|431571582|gb|ELI44452.1| FeS cluster assembly protein sufD [Escherichia coli KTE122]
gi|431582906|gb|ELI54916.1| FeS cluster assembly protein sufD [Escherichia coli KTE125]
gi|431585656|gb|ELI57603.1| FeS cluster assembly protein sufD [Escherichia coli KTE128]
gi|431679399|gb|ELJ45311.1| FeS cluster assembly protein sufD [Escherichia coli KTE177]
gi|431704688|gb|ELJ69313.1| FeS cluster assembly protein sufD [Escherichia coli KTE82]
Length = 423
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAHSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPVKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSYL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSSQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 309 GRAVFNGLINV 319
>gi|297565449|ref|YP_003684421.1| FeS assembly protein SufB [Meiothermus silvanus DSM 9946]
gi|296849898|gb|ADH62913.1| FeS assembly protein SufB [Meiothermus silvanus DSM 9946]
Length = 468
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G KVE P+ Y + + E G + R +++V+EG E+ IE
Sbjct: 189 VYVPKGVKVELPLQAYFRVNTAELGQFE---------RTIIIVDEGAEMHYIEGCTAPTY 239
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
+ + + V+E+V+ KG + R++ +QN S N ++ + +E ++ + G KL+
Sbjct: 240 STDSFHSGVIEIVVKKGARSRYTTIQNWSHNMYNLVTQRAVVHGDAYHEWLDGNLGSKLT 299
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAV 372
+ P +E+ S + Q QD +L+L P + K I + G+A
Sbjct: 300 MKYPSSYLIEPGARSEIMSIAFASTGQHQDTGGKLILAAPHTSGTIVSKSI-SKGQGRAS 358
Query: 373 FDGNVKV 379
+ G VKV
Sbjct: 359 YRGLVKV 365
>gi|340347352|ref|ZP_08670463.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella dentalis DSM 3688]
gi|433651122|ref|YP_007277501.1| FeS assembly protein SufD [Prevotella dentalis DSM 3688]
gi|339609670|gb|EGQ14537.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella dentalis DSM 3688]
gi|433301655|gb|AGB27471.1| FeS assembly protein SufD [Prevotella dentalis DSM 3688]
Length = 447
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 136/318 (42%), Gaps = 38/318 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-------SQIQPITRPSSSLDVSTD 125
L +RD + + + P+RK E +++TD + + ++I+ P + S
Sbjct: 26 LNAVRDRAFEDFKAQGLPTRKVERYKYTDMQQLFAPDYGLNLNRIEIPINPYKAFSCSVP 85
Query: 126 AQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC------ 177
SL + D F + S LP+GV VGSL ++ + FI ++
Sbjct: 86 NLSTSLYFVVNDEFYRKQQTKAS-LPEGVIVGSLREAAE----KNPGFIEKYYARLARTG 140
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
D ++N M A D ++YVP +VE I + +++ +VD + N RV++++EE
Sbjct: 141 EDGVTALNTMLAQDGLLVYVPRNVRVERAI--QVVNILRSDVD----LMVNRRVLIVMEE 194
Query: 238 GGEVGIIEEFVGKEGNDCYW-ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQET 296
G E ++ F +D ++ V+E +G+ + L+ + + Q+
Sbjct: 195 GAEAKLL--FCDDSADDRHFLGTQVIEAYVGENAGLDLYCLEETHAKNVRVSNVYIEQQA 252
Query: 297 ASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
S ++ ++R+ + + G E + +++D+ Q + + L+DH G
Sbjct: 253 HSRVNHNVITLHNGVTRNKLDLVFKGEGAECWCNG--CVIADKEQRVDNNTLIDHRVG-- 308
Query: 357 RQLHKCIVAHSLGQAVFD 374
C +H L + V D
Sbjct: 309 -----CCDSHELYKYVLD 321
>gi|341820485|emb|CCC56766.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella thailandensis fsh4-2]
Length = 469
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G + PI Y + G + R +++V+EGG V +E ++
Sbjct: 190 LYVPKGVHADVPIQ-SYFRINAGRTGQFE------RTLIIVDEGGSVNYVEGCTAPNYSE 242
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
+V+EV + +GG R++ +QN S N ++ R E A+ E V+ + G K++
Sbjct: 243 DSLHAAVVEVFVKQGGYCRYTTIQNWSTNVYSLETKRARAEEAASMEWVDGNLGSKVTMK 302
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
+ G + S D QD ++++ P + + K I H G+A +
Sbjct: 303 YPSIFLAGRGATGSMLSIAAAGKDMHQDTGAKMIHMAPDTHSTIISKAI-CHDGGRADYR 361
Query: 375 GNVKVNR 381
G VK +
Sbjct: 362 GLVKYTK 368
>gi|417511240|ref|ZP_12175907.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353643643|gb|EHC87789.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
Length = 423
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 147/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTAQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++ H L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLHHFKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|260436196|ref|ZP_05790166.1| iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. WH 8109]
gi|260414070|gb|EEX07366.1| iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. WH 8109]
Length = 392
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 25/294 (8%)
Query: 90 PSRKDEPFRFTDTSMIKS-SQIQPITRP-SSSLDVSTDAQFPSLVLIDGFIQNSALNLSN 147
PSR+ EP+R TD + + S++ P S+SL S D + ++++GF + L
Sbjct: 23 PSRRQEPWRLTDLKRLATVSELPASASPLSTSLPASLDG--VTRLVLNGF--DDPLAGQV 78
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
LP+G+ + ++ + + + + C + W + A ++ + +V P+
Sbjct: 79 LPEGITALN----AEELEQALGHTLDRCGCAQV-WPVEFNHAKAQQILALRVRGRV-GPL 132
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
L + G N RV++L+EE E+ +++ + EG + + VLEV +G
Sbjct: 133 ELVLAAGAGLNAT---------RVLLLLEEKAELELMQVLLA-EGASAH--SHVLEVHLG 180
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 327
+ ++RH L ++ + AV QE S Y V G L R V Q+ ET
Sbjct: 181 QEAQLRHGLLATADGASSLMAHFAVEQEPRSSYAFTSVVQGWNLGRVEPRVVQVDGQAET 240
Query: 328 ELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L + ++Q H+ + D P G QL KC+ A A+F+G + V R
Sbjct: 241 VLKGLAVTGAEQQLATHTAVRFDGPEGELDQLQKCL-AGGQSHAIFNGAISVPR 293
>gi|421849591|ref|ZP_16282569.1| iron-sulfur assembly protein SufD [Acetobacter pasteurianus NBRC
101655]
gi|371459652|dbj|GAB27772.1| iron-sulfur assembly protein SufD [Acetobacter pasteurianus NBRC
101655]
Length = 427
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 134/324 (41%), Gaps = 46/324 (14%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP------ITRPSSSLD---VSTDA- 126
R ++ LL T P R E +++T + + + Q + S LD DA
Sbjct: 27 RQAAIGALLRTGLPDRHVEAWKYTSLRPLSAQEFQAPPAQYDAAQAKSLLDNLLSQHDAV 86
Query: 127 -QFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---DLF 181
P +V ++G F+++ LS LP+GV V + S+ Q D
Sbjct: 87 QALPRIVFVNGRFVKD----LSLLPEGVDVSFF---------SQNSLTSDVQASPDRDPL 133
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGE 240
++N D +++V G + L L V ++ IS +PR V++EEG
Sbjct: 134 VALNTALVDDGAILHVAKGADA-GRVLLISLGV------ARDTAISFHPRHSVVLEEGAH 186
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
+ ++ G Y+ N V EV +G+ K+ H+ LQ + A + T V+ Y
Sbjct: 187 LSLLSL---SAGVGPYFHNPVTEVTVGESAKLYHTTLQTEGPQAIALATTYVQVAGHGVY 243
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQ 358
+ G LSRH VH + P + ++ L Q D+ S ++ H C RQ
Sbjct: 244 NSFALGLGSLLSRHEVHARLNAPHAQLHVNGAQNLAEHQVGDITS--VITHAASDCISRQ 301
Query: 359 LHKCIV-AHSLGQAVFDGNVKVNR 381
+ ++ H+ G VF G V V +
Sbjct: 302 TVRNVLDGHARG--VFQGKVLVEQ 323
>gi|417859734|ref|ZP_12504790.1| transport system [Agrobacterium tumefaciens F2]
gi|338822798|gb|EGP56766.1| transport system [Agrobacterium tumefaciens F2]
Length = 425
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 27/329 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPI 113
+L D+ + S LP + RD L + P+R+ E + +TD S++++ P
Sbjct: 17 ALVDAYTAKFSELPGDGAVVAARDVLFDDLKTGGLPTRRIEAWHYTDLKSLLRTV---PE 73
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPD---GVYVGSLLGVSDGIMKRVSD 170
RP+ ++ SLV ++Q+ ++ + + + SLL DG +
Sbjct: 74 DRPAPVIEKQAPTVAGSLV---AYVQHGTADIGKIDEIRVSRFADSLL---DG---SAAA 124
Query: 171 FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
++E D+ ING D V+ +PA ++E PI L+ + G V S R
Sbjct: 125 GLAEASKDDVIGRINGSFVRDGLVLDIPADAEIEKPIELQVIH-GAGQVHS--------R 175
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
V +G + +IE + +D +SV ++V+ G +V LQ Q H+
Sbjct: 176 FPVRFGKGSKATVIERHLSVT-SDAALVSSVTDIVVEDGAEVTWIILQQQGAADVHLGQL 234
Query: 291 AVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLD 350
++ + L V+ GGKL R + + G T+ + +LL + D+ L +
Sbjct: 235 RMKIGADAKIRLFIVNAGGKLVRQELRIDVEGEGTDLIVRGVNLLGGETHTDVTMVLGHN 294
Query: 351 HPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
P ++ + +V + +F G ++V
Sbjct: 295 VPNTTSTEVFRNVV-FDRAKGIFQGMIRV 322
>gi|298387897|ref|ZP_06997446.1| FeS assembly protein SufD [Bacteroides sp. 1_1_14]
gi|298259304|gb|EFI02179.1| FeS assembly protein SufD [Bacteroides sp. 1_1_14]
Length = 447
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++Q P DV + V+ D F
Sbjct: 42 FPTRKMEKYKYTDISKYFEPDYGLNLNRLQIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL ++LP+GV GSL V+ + V F + D + N A D + YV
Sbjct: 101 NKALPKTHLPEGVIFGSLKEVAAEHPELVKKFYGKLADTSKDGITAFNTAFAQDGVIFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVIVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV G+ L+ + I V+QE S L ++ +R+
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIADKNQHVDNNTSIDHAVPNC 310
>gi|383762991|ref|YP_005441973.1| protein SufD [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381383259|dbj|BAM00076.1| protein SufD [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 424
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 43/336 (12%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
+ + S++ +P + + R ++ + PWP DE +R T + + +P+ P+
Sbjct: 1 MRAHSAARNEPEWMLEFRLNAWRQFEQMPWPQPTDESWRRTRLTGFDLNNFKPLAVPTGL 60
Query: 120 LDVSTDAQF-----------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV---SDGIM 165
++ ++F S+V D ++N LN + G+ L ++
Sbjct: 61 VEKGELSKFLQDELNEMDSAASMVFEDSGLRNRILNTNLDEHGIIFTDLQSAVLKHPELV 120
Query: 166 KRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+R F++E D F +++ +YVPA +V P+ + G
Sbjct: 121 RRY--FMTEAVKPDHNKFTALHAALWDTGSFVYVPARARVTLPLQVILNQCTPG------ 172
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
S +V+ EEG EV ++++ +G K+G SV+E+++G G VR+ LQ+
Sbjct: 173 -VGSYHHTLVVAEEGAEVTVVDDLLGAKDGLQA----SVVELILGPGSVVRYMNLQDFEH 227
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
+A + + ++VS G +L++ + V +GP EL + +Q D
Sbjct: 228 SAWNFLTGRAVMNRDADLRWIQVSWGSRLTKAFLDVDLMGPGGHAELLGIYFPTGEQHID 287
Query: 343 LHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 378
H L QLH+ H +F+G +K
Sbjct: 288 -HQTL----------QLHRA--PHCFSDLLFNGALK 310
>gi|33863871|ref|NP_895431.1| ABC transporter [Prochlorococcus marinus str. MIT 9313]
gi|33635454|emb|CAE21779.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9313]
Length = 416
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
++E + K H L AA + AV QE +S LV V G + RH + Q
Sbjct: 200 LVEAHLQSEAKFHHGLLAFGHPQAALLAHLAVEQEPSSDVSLVSVCQGWGVIRHEPQLIQ 259
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
L +++L + L+ ++Q D HS + + P G QLHK +VA G++VF+G V+V
Sbjct: 260 LNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHK-VVAAGHGRSVFNGVVQVP 318
Query: 381 R 381
R
Sbjct: 319 R 319
>gi|120437456|ref|YP_863142.1| FeS assembly protein SufD [Gramella forsetii KT0803]
gi|117579606|emb|CAL68075.1| FeS assembly protein SufD [Gramella forsetii KT0803]
Length = 437
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 139/337 (41%), Gaps = 18/337 (5%)
Query: 56 LEDSLPSSSSSLPQPLP----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + L + +R+ + + +P++K+E +++T + +
Sbjct: 3 LKDKLISSFLAFEEGLEPDNGMDAIRNQAIKDFEDLGFPNKKNEDWKYTSLNSVLKHDYS 62
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ ++D D LV IDG + ++ V + S D
Sbjct: 63 VFPKKEDAIDYRDIKKYLIHDIDTYDLVFIDGIYSSHLSQTTHEKIDVCLMSSALTKDKY 122
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+ ++ ++ S+N + + I++ + + PI + ++ GN S L
Sbjct: 123 RPIIDNYFNKVAPKSGLNSLNTAFSKEGAFIHIHKNKQADKPIQI--INFATGNESSLLL 180
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
PR +V+ +E V IIE + NSV E+ K V + +QN + +A
Sbjct: 181 Q---PRNLVVADENSHVQIIERHQSLTDHPV-LTNSVTEIFADKRAIVDYYKIQNDNASA 236
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
+ I T + Q+ S + S GGKL+R+N++ Q G ++ + ++ Q D +
Sbjct: 237 SLIDNTFIEQKDESHVSVHTFSFGGKLTRNNLNFYQRGERIDSTMKGVTIIEGKQHVDHN 296
Query: 345 SRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+ + P Q +K I S VF+G V V +
Sbjct: 297 TLVHHIEPNCESHQDYKGIFGDS-STGVFNGKVLVEK 332
>gi|385872296|gb|AFI90816.1| FeS assembly protein SufD [Pectobacterium sp. SCC3193]
Length = 448
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I + AG + E P+YL ++S + + L + R + VE G IIE +V + +
Sbjct: 159 LIRLAAGQQAEKPLYLLHIS----SSQTAALNTVHHRHHLNVERGASAEIIEHYVSLDEH 214
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + L V + +V H L + S + AH R + + G
Sbjct: 215 -AHFTGARLTVNAAENSQVSHYKLAFEAAASYHFAHNDLVLARDARVRSHSFL---LGAG 270
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVAHSL 368
L+RH+ Q G T ++S L V + D +R L+H +GY RQLHK IV +
Sbjct: 271 LTRHHTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV-NDR 327
Query: 369 GQAVFDGNVKV 379
+AVF+G +KV
Sbjct: 328 ARAVFNGMIKV 338
>gi|425081976|ref|ZP_18485073.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428933169|ref|ZP_19006729.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae JHCK1]
gi|405601202|gb|EKB74356.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|426305871|gb|EKV67984.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae JHCK1]
Length = 424
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 29/307 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q LL P+RK E +++T + + + S S + P LV IDG
Sbjct: 34 QQLLRLGLPTRKHEDWKYTPLDALLNGRFVADEGASLSAEQRDALALPLDAWRLVFIDGR 93
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
L D + GV + + Q ++F + A + I V
Sbjct: 94 YH------PQLSDDLAAS---GVEVSVDNQRQHLPHALQP-EVFLHLTESLAQTVTRIRV 143
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P +++ P+ L +++ + L ++ R + +E G E I+E ++ ++
Sbjct: 144 PRNRRLDKPLLLMHIT---SGLTGDALNTAHYRHHLALESGAEATIVEHYLSL-NEQPHF 199
Query: 258 ANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
L + + ++H ++ +S + AH R +A + GG++ RH
Sbjct: 200 TGGRLTMTVADNAHLQHIKLAFENARSYHFAHNDLLLGRDASAFSSSFL---LGGQVLRH 256
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAV 372
+ G ++ L+S + V ++ D SR LDH GYC RQLHK IV+ G+AV
Sbjct: 257 QTSTRLGGENSNLRLNSLAMPVKNEVCD--SRTWLDHQVGYCTSRQLHKTIVSDK-GRAV 313
Query: 373 FDGNVKV 379
F+G + V
Sbjct: 314 FNGLINV 320
>gi|384261451|ref|YP_005416637.1| FeS assembly protein SufD [Rhodospirillum photometricum DSM 122]
gi|378402551|emb|CCG07667.1| FeS assembly protein SufD [Rhodospirillum photometricum DSM 122]
Length = 426
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 140/324 (43%), Gaps = 28/324 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQF-- 128
L LR + + P+ + E +++T+ + + P P +L S DA+
Sbjct: 7 LAGLRRHALEAYRRQGIPTPRVEAWKYTNLACLGREVFGPAP-PVPTLTRSDLPDARLLP 65
Query: 129 ---PSLVLIDGFIQNSALNLSN-LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
P +V I+G A LS+ LP GV GSL + V + Q + S+
Sbjct: 66 LTAPRVVFINGRF---APALSDPLPAGVAAGSLQAQLRTDPEAVRPLLERAQTQETLESL 122
Query: 185 NGMGAP----DLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
D G+ + V G VE P++L +L+V G + ++PR V+++ +
Sbjct: 123 PLAALNLALLDDGLFLSVAEGVTVETPVHLVHLTVPGDGPSA-----THPRAVMVLGKNA 177
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
I FV G + N V +V++ +G ++ H+ L + + + T +
Sbjct: 178 RAVIASSFVCLPGAATF-TNLVSDVILEEGAQLSHARLICGAADGVTVGATLASVAAGAR 236
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCR 357
YE ++ GG+L R+ V+ G + ++ + + + Q D + + +DH P
Sbjct: 237 YETFSLTLGGRLVRNETRVRLEGEGAQALVNGAYAVRAGQHVD--NTVFVDHAVPHATSS 294
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
QL K ++ + G+AVF G + V R
Sbjct: 295 QLFKGVLDET-GRAVFQGKILVRR 317
>gi|377575887|ref|ZP_09804871.1| iron-sulfur cluster assembly protein SufD [Escherichia hermannii
NBRC 105704]
gi|377541919|dbj|GAB50036.1| iron-sulfur cluster assembly protein SufD [Escherichia hermannii
NBRC 105704]
Length = 423
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 148/350 (42%), Gaps = 63/350 (18%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+S+++L Q L + + ++ + LL P RKDE +++T + + + +
Sbjct: 4 LPNSANALTQWRHLFEAQGNARSPQAQAHLEQLLREGLPGRKDEHWKYTPLNGLLAHKF- 62
Query: 112 PITRPSSSLDVSTDAQFP------SLVLIDGF--------IQNSALNLS------NLPDG 151
+ S +D + A+F +V IDG + NS ++ LP
Sbjct: 63 -VVPESQRIDATQLARFALPVEAVRMVFIDGEYSAALSDDVNNSGFEIAVNDQRDTLPAA 121
Query: 152 VYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKY 211
V + L +++ + + V+ I V + P+ L +
Sbjct: 122 VQPETFLHLTESLARSVTH------------------------IRVKRNQQPAKPLLLMH 157
Query: 212 LSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGK 271
L+ D ++ ++ R +++E G + +IE +V + + ++ S G +
Sbjct: 158 LN---SGRDGDEIATAHYRHHLVMESGAQATVIEHYVSLDDHR-HFTGSRFTCEGGANSQ 213
Query: 272 VRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSS 331
+ H L ++ + H + + + GG + RH+ + G + L+S
Sbjct: 214 LHHYKLAFENPLSHHFAHNDLLLDQDAFALSSSFLLGGAVLRHHTSTRLEGENITLRLNS 273
Query: 332 FHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
L V+++ D SR L+H +GYC RQLHK ++A G+AVF+G +KV
Sbjct: 274 LALPVNNEVCD--SRTWLEHNKGYCNSRQLHK-VIARDRGKAVFNGLIKV 320
>gi|405382874|ref|ZP_11036650.1| FeS assembly protein SufD [Rhizobium sp. CF142]
gi|397320635|gb|EJJ25067.1| FeS assembly protein SufD [Rhizobium sp. CF142]
Length = 424
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 141/327 (43%), Gaps = 22/327 (6%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPI 113
+L ++ LP + LRD L P+R+ E + +TD +++++ +Q
Sbjct: 15 ALIEAFNEKIGELPGNGAVTALRDRLLDDLKREGLPTRRVEAWHYTDLKNLLRNIPVQAG 74
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
S +L+ D P L +I G + A + +L VY L +DG D +
Sbjct: 75 DAGSEALEPLVDGS-PVLAVIQGKPVHKA-SAGDLAVAVYSEKL---TDGSAAANLDALG 129
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
D ING D V+ VP G + E P+ ++++ GG++ + +LP+S
Sbjct: 130 R---DDAVGRINGSFVKDGYVVDVPDGTEFEEPLEIQFVHA-GGDIHT-RLPVSF----- 179
Query: 234 LVEEGGEV-GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
G V G++ E ++ + V ++ +G+G ++ LQ Q H+ V
Sbjct: 180 ----GANVKGVVIERHQSVTDNAALVSHVSDITVGQGTELTWIILQQQGAEDTHLGQIRV 235
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
+ +L ++ GGKL R ++++ G + L +LL ++ D+ L D P
Sbjct: 236 DLGADAKLKLFVINAGGKLVRQELNIKVTGEGADLTLRGINLLGAETHTDVTMVLGHDVP 295
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKV 379
++ + +V + VF G ++V
Sbjct: 296 HTGSTEVIRNVV-FDRARGVFQGMIRV 321
>gi|419957355|ref|ZP_14473421.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae GS1]
gi|388607513|gb|EIM36717.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae GS1]
Length = 423
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 42/339 (12%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTS-------M 104
LP+SS++L Q L + + + Q +L P+RK E +++T +
Sbjct: 4 LPNSSNALQQWHRLFEAQAGARSEQAQHHLQQMLRLGLPTRKHENWKYTPLDGLLNGEFV 63
Query: 105 IKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ +Q++P R L +S DA LV +DG + + L D V D +
Sbjct: 64 TRLAQVRPDQR--DMLALSVDA--VRLVFVDGLFR------AELSDSVQESGF----DIV 109
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+ ++ ++F + + + I V + P+ L +++ V ++
Sbjct: 110 INDERQSLNAPVQPEVFLHLTESLSQSVTHIRVKRNQRPAKPLLLMHIT---QGVAGDEI 166
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++ R + + EG E +IE +V ND ++ S L + + ++ H L ++
Sbjct: 167 NTAHYRHHLELAEGAEATVIEHYVSL--NDTRHFTGSRLTMNVAANAQLHHIKLAFENPL 224
Query: 284 AAHIKWTAVR-QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
+ H + + A+ Y GG + RHN Q G +T ++S + V + D
Sbjct: 225 SHHFAHNDILLGQDAAAYSH-SFLLGGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD 283
Query: 343 LHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 284 --TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|354614231|ref|ZP_09032109.1| FeS assembly protein SufB [Saccharomonospora paurometabolica YIM
90007]
gi|353221416|gb|EHB85776.1| FeS assembly protein SufB [Saccharomonospora paurometabolica YIM
90007]
Length = 481
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIVVDEGAYVHYVEGCTAPIYQS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+V+ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 255 DSLHSAVVEIVVKKGGRCRYTTIQNWSGNVYNLVTKRAKAEEGATMEWIDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S DQ QD ++++ P + K VA S G+ +
Sbjct: 315 YPSVFLTGEHAKGEVLSVAFAGEDQHQDAGAKMVHMAPHTSSTIVSKS-VARSGGRTSYR 373
Query: 375 GNVKVNR 381
G VKVN+
Sbjct: 374 GLVKVNK 380
>gi|424895175|ref|ZP_18318749.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393179402|gb|EJC79441.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 424
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 131/331 (39%), Gaps = 30/331 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ LP + LRD L P+R+ E + +TD + T
Sbjct: 15 ALIEAFNQQIGDLPGNGAVTALRDRLLDDLKQAGLPTRRIEAWHYTDLKNLLR------T 68
Query: 115 RPSSSLDVSTDAQFP------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
P + D ++A P L +I G N +L Y LL DG
Sbjct: 69 VPPQAGDAGSEALEPLVADSEVLAVIQGH-SNQKAAAGDLGVSAYSERLL---DG---SA 121
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
++ + D ING D V+ VPA +++ P+ +++ V G +LP++
Sbjct: 122 AEGLDALGSDDAVGRINGSFVRDGYVVDVPADTELDGPLEIQF--VHAGGQAHTRLPVA- 178
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
G + +IE + G D + V ++ +G+G ++ LQ Q + H+
Sbjct: 179 ------FGAGVKATVIERHLAVTG-DAALVSHVSDITVGEGAELTWIILQQQGGDDTHLG 231
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLL 348
+ + L ++ GG+L R +H++ G + L +LL D D+ L
Sbjct: 232 QIRIDLGANAKLRLFVINAGGRLVRQELHIKVTGEGADLTLRGINLLGGDSHTDVTMVLG 291
Query: 349 LDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
D P ++ + +V + VF G ++V
Sbjct: 292 HDVPHTGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|444351859|ref|YP_007388003.1| Iron-sulfur cluster assembly protein SufD [Enterobacter aerogenes
EA1509E]
gi|443902689|emb|CCG30463.1| Iron-sulfur cluster assembly protein SufD [Enterobacter aerogenes
EA1509E]
Length = 423
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 144/338 (42%), Gaps = 36/338 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFT--DTSMIKSSQ 109
LP+SS++L Q L + + Q LL P+RK E +++T D + +
Sbjct: 4 LPNSSNALQQWHHLFEAQGEERTPQANQHLQQLLRLGLPTRKHENWKYTPLDALLSGTFV 63
Query: 110 IQPITRPSSSLD-VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
P T + D ++ + +V IDG + L D + D + +
Sbjct: 64 ATPATLSVAQRDALALNLDAWRMVFIDGRFSPA------LSDDLTASGFDVSVDNQRQHL 117
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
D + ++F + A + I V + E P+ L +++ + +L ++
Sbjct: 118 PDAVQP----EVFLHLTESLAQTVTRIDVKRNQRPEKPLLLMHIT---SGLAGDELNTAH 170
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH---SYLQNQSLNAA 285
R + +E G + IIE ++ + ++ L + + ++H ++ QS + A
Sbjct: 171 YRHHLALESGAQATIIEHYISLD-EQRHFTGGRLTMSVADNAHLQHIKLAFENGQSYHFA 229
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
H R +A + GG + RH+ + G ++ ++S + V ++ D S
Sbjct: 230 HNDLLLGRDASAFSSSFL---LGGAVLRHHTSTRLAGENSNLRINSLAMPVKNEVCD--S 284
Query: 346 RLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
R LDH GYC RQLHK IV+ G+AVF+G + V +
Sbjct: 285 RTWLDHRVGYCNSRQLHKTIVSDK-GRAVFNGLINVAK 321
>gi|398380046|ref|ZP_10538164.1| FeS assembly protein SufD [Rhizobium sp. AP16]
gi|397721362|gb|EJK81910.1| FeS assembly protein SufD [Rhizobium sp. AP16]
Length = 424
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 135/325 (41%), Gaps = 42/325 (12%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT--------SMIKSSQIQPITRPSS 118
LP + +RD L + P+R+ E + +TD + + + ++P++ +
Sbjct: 27 LPGDGEVFAIRDRLLDDLKTAGLPTRRFEAWHYTDFKNLLRTVPTDLGTGSVEPLSPTAE 86
Query: 119 SLDVSTDAQFPSL--VLIDGFIQNSALNLSNLPDGVYVGSL--LGVSDGIMKRVSDFISE 174
V + Q ++ +DG I + ++ +L DG L LG D I + + F+
Sbjct: 87 GSAVLSVLQGRAVGKASVDGLIVSRYID--SLTDGTAAAGLEALGKDDAIGRINASFVR- 143
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D VI P G +++ P+ ++++ GG + S+ LP++
Sbjct: 144 ----------------DGYVIEFPDGTELDAPLEIQFIHA-GGQIHSR-LPVT------- 178
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ +IE G G +S+ ++ +GKG +V LQ Q H+ V
Sbjct: 179 FGASAKATVIERHEGVPGA-AALVSSISDITVGKGAEVTWIILQEQGSEDTHLGQIRVDL 237
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 354
+ +L ++ GGKL R +H++ G E L +LL D D+ L D P
Sbjct: 238 GQDAKLKLFVINAGGKLVRQELHIKVSGEGAELSLRGVNLLGGDTHTDVTMVLGHDVPHT 297
Query: 355 YCRQLHKCIVAHSLGQAVFDGNVKV 379
++ + +V + VF G ++V
Sbjct: 298 SSTEIVRNVV-FDRARGVFQGMIRV 321
>gi|336249908|ref|YP_004593618.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
aerogenes KCTC 2190]
gi|334735964|gb|AEG98339.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
aerogenes KCTC 2190]
Length = 423
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 144/338 (42%), Gaps = 36/338 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFT--DTSMIKSSQ 109
LP+SS++L Q L + + Q LL P+RK E +++T D + +
Sbjct: 4 LPNSSNALQQWHHLFEAQGEERTPQANQHLQQLLRLGLPTRKHENWKYTPLDALLSGTFV 63
Query: 110 IQPITRPSSSLD-VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
P T + D ++ + +V +DG + L D + D + +
Sbjct: 64 ATPATLSVAQRDALALNLDAWRMVFVDGRFSPA------LSDDLTASGFDVSVDNQRQHL 117
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
D + ++F + A + I V + E P+ L +++ + +L ++
Sbjct: 118 PDAVQP----EVFLHLTESLAQTVTRIDVKRNQRPEKPLLLMHIT---SGLAGDELNTAH 170
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH---SYLQNQSLNAA 285
R + +E G + IIE ++ + ++ L + + ++H ++ QS + A
Sbjct: 171 YRHHLALESGAQATIIEHYISLD-EQRHFTGGRLTMAVADNAHLQHIKLAFENGQSYHFA 229
Query: 286 HIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHS 345
H R +A + GG + RH+ + G ++ ++S + V ++ D S
Sbjct: 230 HNDLLLGRDASAFSSSFL---LGGAVLRHHTSTRLAGENSNLRINSLAMPVKNEVCD--S 284
Query: 346 RLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
R LDH GYC RQLHK IV+ G+AVF+G + V +
Sbjct: 285 RTWLDHRVGYCNSRQLHKTIVSDK-GRAVFNGLINVAK 321
>gi|421080521|ref|ZP_15541439.1| Cysteine desulfurase activator complex subunit SufD [Pectobacterium
wasabiae CFBP 3304]
gi|401704533|gb|EJS94738.1| Cysteine desulfurase activator complex subunit SufD [Pectobacterium
wasabiae CFBP 3304]
Length = 448
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I + AG + E P+YL ++S + + L + R + VE G IIE +V + +
Sbjct: 159 LIRLAAGQQAEKPLYLLHIS----SSQAAALNTVHHRHHLNVERGASAEIIEHYVSLDEH 214
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + L V + +V H L + S + AH R + + G
Sbjct: 215 -AHFTGARLTVNAAENSQVSHYKLAFEAAASYHFAHNDLILARDARVRSHSFL---LGAG 270
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVAHSL 368
L+RH+ Q G T ++S L V + D +R L+H +GY RQLHK IV +
Sbjct: 271 LTRHHTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV-NDR 327
Query: 369 GQAVFDGNVKV 379
+AVF+G +KV
Sbjct: 328 ARAVFNGMIKV 338
>gi|383813996|ref|ZP_09969419.1| FeS assembly protein SufD [Serratia sp. M24T3]
gi|383297194|gb|EIC85505.1| FeS assembly protein SufD [Serratia sp. M24T3]
Length = 433
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +P G + E +YL L + G S+++ + R + +E G +IE +V N+
Sbjct: 150 IRLPKGKQAEKALYL--LHISSGRDKSREINTVHHRYHLEIESGANAEVIEHYVSL--NE 205
Query: 255 C-YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + L IG + H S+ S + AH T R + + G
Sbjct: 206 LGHFTGARLTANIGDNATLSHYKLSFESQASYHFAHNDLTIGRDANVTSNSFL---LGAG 262
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
L+RH+ + G + ++S L + + D +R L+H +GYC QLHK IV +
Sbjct: 263 LTRHHTSARHNGEGSNLNMNSLLLPMDSELAD--TRTYLEHNKGYCNSHQLHKVIV-NDK 319
Query: 369 GQAVFDGNVKVNR 381
+AVF+G + V +
Sbjct: 320 AKAVFNGMIYVAK 332
>gi|13470345|ref|NP_101911.1| hypothetical protein mlr0020 [Mesorhizobium loti MAFF303099]
gi|14021084|dbj|BAB47697.1| mlr0020 [Mesorhizobium loti MAFF303099]
Length = 430
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 151/370 (40%), Gaps = 61/370 (16%)
Query: 29 NKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTP 88
K+++ T PQ T ++ +I D+ S LP + RD + + +
Sbjct: 4 GKVKLMNMHTQPQRTPAETALI-------DAFGDRLSLLPGDGAVMLKRDDAIEAI-KHG 55
Query: 89 WPSRKDEPFRFTDTSMIKS-----------SQIQPITRPSSSLDV---STDAQFPSLVLI 134
P+R+ E + +TD + S I PI S+ L V +DA+ P+L
Sbjct: 56 LPTRRVESWHYTDLRRLLSVVPDFDPAAMAKAIAPIVEGSAVLPVLNGKSDAKVPAL--- 112
Query: 135 DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFISEFQCGDLFWSINGMGAPDLG 193
DGV V SL S+ ++ ++ + + D ++N D
Sbjct: 113 ---------------DGVTVQSL---SEKLIDGSIAPGLDSYGSDDAIGALNTAFVADGY 154
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+ + G ++E PI L+ + G ++ R+ V V G + I+E + G+
Sbjct: 155 FVDIADGTELEKPIELQNVQAGGQ---------THVRLAVRVGAGAKAVIVER---QAGD 202
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
+SV ++V+G+ +V +Q Q A H+ + L ++ GGKL R
Sbjct: 203 GAALVSSVSQLVLGEDAEVTWLIVQEQPDTATHLAQFKAHIGKNAKLTLFVMNAGGKLVR 262
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQA 371
V V+ G + +L +LL D D+ ++LDH P ++ + +V +
Sbjct: 263 QEVMVKTTGEGADFKLRGINLLAGDTHSDV--TMVLDHAVPHTTSTEVIRNVVTGK-ARG 319
Query: 372 VFDGNVKVNR 381
VF G + V++
Sbjct: 320 VFQGRINVHQ 329
>gi|309790998|ref|ZP_07685538.1| FeS assembly protein SufB [Oscillochloris trichoides DG-6]
gi|308226971|gb|EFO80659.1| FeS assembly protein SufB [Oscillochloris trichoides DG6]
Length = 675
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVPAG KV+ P+ Y + + G + R ++++EEG E IE
Sbjct: 396 VYVPAGVKVDIPLQAYFRINAESMGQFE---------RTLIIIEEGAEAHYIEGCTAPIY 446
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH-IKWTAVRQETASGYELVEVSTGGKL 311
+ ++V+E++I KGGK R++ +QN + N + + AV E AS E V+ + G KL
Sbjct: 447 STNSLHSAVVEIIIKKGGKFRYTTIQNWANNIYNLVTKRAVAHEEAS-MEWVDGNIGSKL 505
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQA 371
+ V +G E+ S Q QD ++++ P R +K V+ G+
Sbjct: 506 TMKYPSVYLMGRKARGEVLSVAYAGKGQHQDAGAKMVHVAPETTSRITNKS-VSKDGGKT 564
Query: 372 VFDGNVKV 379
+ G KV
Sbjct: 565 TYRGLAKV 572
>gi|22125829|ref|NP_669252.1| cysteine desulfurase [Yersinia pestis KIM10+]
gi|45441979|ref|NP_993518.1| cysteine desulfurase [Yersinia pestis biovar Microtus str. 91001]
gi|108807741|ref|YP_651657.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Antiqua]
gi|108812018|ref|YP_647785.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Nepal516]
gi|145598050|ref|YP_001162126.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Pestoides F]
gi|162421329|ref|YP_001607000.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Angola]
gi|165927487|ref|ZP_02223319.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939482|ref|ZP_02228028.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011824|ref|ZP_02232722.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210931|ref|ZP_02236966.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400942|ref|ZP_02306448.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422191|ref|ZP_02313944.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424946|ref|ZP_02316699.1| FeS assembly protein SufD [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229837926|ref|ZP_04458085.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229895086|ref|ZP_04510262.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|229898487|ref|ZP_04513632.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902330|ref|ZP_04517450.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|270490490|ref|ZP_06207564.1| FeS assembly protein SufD [Yersinia pestis KIM D27]
gi|284987069|ref|YP_002347366.2| cysteine desulfurase [Yersinia pestis CO92]
gi|294503595|ref|YP_003567657.1| hypothetical protein YPZ3_1485 [Yersinia pestis Z176003]
gi|384122041|ref|YP_005504661.1| hypothetical protein YPD4_1450 [Yersinia pestis D106004]
gi|384125957|ref|YP_005508571.1| hypothetical protein YPD8_1495 [Yersinia pestis D182038]
gi|384139772|ref|YP_005522474.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis A1122]
gi|384414552|ref|YP_005623914.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420547340|ref|ZP_15045241.1| FeS assembly protein SufD [Yersinia pestis PY-01]
gi|420552669|ref|ZP_15049999.1| FeS assembly protein SufD [Yersinia pestis PY-02]
gi|420558207|ref|ZP_15054855.1| FeS assembly protein SufD [Yersinia pestis PY-03]
gi|420563687|ref|ZP_15059726.1| FeS assembly protein SufD [Yersinia pestis PY-04]
gi|420568725|ref|ZP_15064297.1| FeS assembly protein SufD [Yersinia pestis PY-05]
gi|420574379|ref|ZP_15069418.1| FeS assembly protein SufD [Yersinia pestis PY-06]
gi|420579690|ref|ZP_15074239.1| FeS assembly protein SufD [Yersinia pestis PY-07]
gi|420585032|ref|ZP_15079086.1| FeS assembly protein SufD [Yersinia pestis PY-08]
gi|420590157|ref|ZP_15083698.1| FeS assembly protein SufD [Yersinia pestis PY-09]
gi|420595552|ref|ZP_15088554.1| FeS assembly protein SufD [Yersinia pestis PY-10]
gi|420601190|ref|ZP_15093576.1| FeS assembly protein SufD [Yersinia pestis PY-11]
gi|420606634|ref|ZP_15098476.1| FeS assembly protein SufD [Yersinia pestis PY-12]
gi|420612034|ref|ZP_15103336.1| FeS assembly protein SufD [Yersinia pestis PY-13]
gi|420617390|ref|ZP_15108038.1| feS assembly protein SufD [Yersinia pestis PY-14]
gi|420622710|ref|ZP_15112787.1| FeS assembly protein SufD [Yersinia pestis PY-15]
gi|420627795|ref|ZP_15117398.1| FeS assembly protein SufD [Yersinia pestis PY-16]
gi|420632900|ref|ZP_15121996.1| feS assembly protein SufD [Yersinia pestis PY-19]
gi|420638115|ref|ZP_15126672.1| feS assembly protein SufD [Yersinia pestis PY-25]
gi|420643641|ref|ZP_15131697.1| feS assembly protein SufD [Yersinia pestis PY-29]
gi|420648863|ref|ZP_15136435.1| feS assembly protein SufD [Yersinia pestis PY-32]
gi|420654513|ref|ZP_15141511.1| feS assembly protein SufD [Yersinia pestis PY-34]
gi|420659990|ref|ZP_15146432.1| feS assembly protein SufD [Yersinia pestis PY-36]
gi|420665305|ref|ZP_15151196.1| feS assembly protein SufD [Yersinia pestis PY-42]
gi|420670198|ref|ZP_15155643.1| feS assembly protein SufD [Yersinia pestis PY-45]
gi|420675544|ref|ZP_15160506.1| FeS assembly protein SufD [Yersinia pestis PY-46]
gi|420681135|ref|ZP_15165570.1| feS assembly protein SufD [Yersinia pestis PY-47]
gi|420686431|ref|ZP_15170295.1| feS assembly protein SufD [Yersinia pestis PY-48]
gi|420691640|ref|ZP_15174880.1| feS assembly protein SufD [Yersinia pestis PY-52]
gi|420697424|ref|ZP_15179954.1| FeS assembly protein SufD [Yersinia pestis PY-53]
gi|420703077|ref|ZP_15184572.1| feS assembly protein SufD [Yersinia pestis PY-54]
gi|420708678|ref|ZP_15189374.1| FeS assembly protein SufD [Yersinia pestis PY-55]
gi|420714084|ref|ZP_15194206.1| FeS assembly protein SufD [Yersinia pestis PY-56]
gi|420719563|ref|ZP_15198951.1| FeS assembly protein SufD [Yersinia pestis PY-58]
gi|420725079|ref|ZP_15203756.1| FeS assembly protein SufD [Yersinia pestis PY-59]
gi|420730683|ref|ZP_15208772.1| FeS assembly protein SufD [Yersinia pestis PY-60]
gi|420735706|ref|ZP_15213319.1| FeS assembly protein SufD [Yersinia pestis PY-61]
gi|420741183|ref|ZP_15218242.1| FeS assembly protein SufD [Yersinia pestis PY-63]
gi|420746768|ref|ZP_15223026.1| FeS assembly protein SufD [Yersinia pestis PY-64]
gi|420752334|ref|ZP_15227920.1| FeS assembly protein SufD [Yersinia pestis PY-65]
gi|420757915|ref|ZP_15232529.1| FeS assembly protein SufD [Yersinia pestis PY-66]
gi|420763386|ref|ZP_15237200.1| FeS assembly protein SufD [Yersinia pestis PY-71]
gi|420768578|ref|ZP_15241874.1| FeS assembly protein SufD [Yersinia pestis PY-72]
gi|420773593|ref|ZP_15246397.1| FeS assembly protein SufD [Yersinia pestis PY-76]
gi|420779153|ref|ZP_15251313.1| FeS assembly protein SufD [Yersinia pestis PY-88]
gi|420784742|ref|ZP_15256208.1| FeS assembly protein SufD [Yersinia pestis PY-89]
gi|420789956|ref|ZP_15260861.1| FeS assembly protein SufD [Yersinia pestis PY-90]
gi|420795462|ref|ZP_15265817.1| FeS assembly protein SufD [Yersinia pestis PY-91]
gi|420800520|ref|ZP_15270357.1| FeS assembly protein SufD [Yersinia pestis PY-92]
gi|420805910|ref|ZP_15275229.1| FeS assembly protein SufD [Yersinia pestis PY-93]
gi|420811212|ref|ZP_15280010.1| feS assembly protein SufD [Yersinia pestis PY-94]
gi|420816778|ref|ZP_15285017.1| FeS assembly protein SufD [Yersinia pestis PY-95]
gi|420822076|ref|ZP_15289788.1| FeS assembly protein SufD [Yersinia pestis PY-96]
gi|420827162|ref|ZP_15294346.1| FeS assembly protein SufD [Yersinia pestis PY-98]
gi|420832865|ref|ZP_15299504.1| FeS assembly protein SufD [Yersinia pestis PY-99]
gi|420837720|ref|ZP_15303892.1| FeS assembly protein SufD [Yersinia pestis PY-100]
gi|420842903|ref|ZP_15308589.1| FeS assembly protein SufD [Yersinia pestis PY-101]
gi|420848558|ref|ZP_15313675.1| FeS assembly protein SufD [Yersinia pestis PY-102]
gi|420854084|ref|ZP_15318428.1| FeS assembly protein SufD [Yersinia pestis PY-103]
gi|420859410|ref|ZP_15323054.1| FeS assembly protein SufD [Yersinia pestis PY-113]
gi|421763895|ref|ZP_16200687.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis INS]
gi|21958758|gb|AAM85503.1|AE013796_6 hypothetical protein y1937 [Yersinia pestis KIM10+]
gi|45436842|gb|AAS62395.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Yersinia pestis biovar
Microtus str. 91001]
gi|108775666|gb|ABG18185.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Nepal516]
gi|108779654|gb|ABG13712.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Antiqua]
gi|145209746|gb|ABP39153.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Pestoides F]
gi|162354144|gb|ABX88092.1| FeS assembly protein SufD [Yersinia pestis Angola]
gi|165912531|gb|EDR31162.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
IP275]
gi|165920542|gb|EDR37819.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989289|gb|EDR41590.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208111|gb|EDR52591.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166959003|gb|EDR56024.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049795|gb|EDR61203.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056133|gb|EDR65911.1| FeS assembly protein SufD [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680665|gb|EEO76761.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|229688035|gb|EEO80106.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694292|gb|EEO84339.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701848|gb|EEO89871.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|262361637|gb|ACY58358.1| hypothetical protein YPD4_1450 [Yersinia pestis D106004]
gi|262365621|gb|ACY62178.1| hypothetical protein YPD8_1495 [Yersinia pestis D182038]
gi|270338994|gb|EFA49771.1| FeS assembly protein SufD [Yersinia pestis KIM D27]
gi|294354054|gb|ADE64395.1| hypothetical protein YPZ3_1485 [Yersinia pestis Z176003]
gi|320015056|gb|ADV98627.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342854901|gb|AEL73454.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis A1122]
gi|391425371|gb|EIQ87653.1| FeS assembly protein SufD [Yersinia pestis PY-01]
gi|391426758|gb|EIQ88919.1| FeS assembly protein SufD [Yersinia pestis PY-02]
gi|391427629|gb|EIQ89698.1| FeS assembly protein SufD [Yersinia pestis PY-03]
gi|391440704|gb|EIR01253.1| FeS assembly protein SufD [Yersinia pestis PY-04]
gi|391442227|gb|EIR02648.1| FeS assembly protein SufD [Yersinia pestis PY-05]
gi|391445614|gb|EIR05723.1| FeS assembly protein SufD [Yersinia pestis PY-06]
gi|391457780|gb|EIR16695.1| FeS assembly protein SufD [Yersinia pestis PY-07]
gi|391458744|gb|EIR17582.1| FeS assembly protein SufD [Yersinia pestis PY-08]
gi|391460926|gb|EIR19584.1| FeS assembly protein SufD [Yersinia pestis PY-09]
gi|391473883|gb|EIR31223.1| FeS assembly protein SufD [Yersinia pestis PY-10]
gi|391475433|gb|EIR32637.1| FeS assembly protein SufD [Yersinia pestis PY-11]
gi|391476268|gb|EIR33404.1| FeS assembly protein SufD [Yersinia pestis PY-12]
gi|391489853|gb|EIR45559.1| FeS assembly protein SufD [Yersinia pestis PY-13]
gi|391490977|gb|EIR46581.1| FeS assembly protein SufD [Yersinia pestis PY-15]
gi|391492841|gb|EIR48251.1| feS assembly protein SufD [Yersinia pestis PY-14]
gi|391505298|gb|EIR59324.1| FeS assembly protein SufD [Yersinia pestis PY-16]
gi|391506197|gb|EIR60141.1| feS assembly protein SufD [Yersinia pestis PY-19]
gi|391510762|gb|EIR64261.1| feS assembly protein SufD [Yersinia pestis PY-25]
gi|391521190|gb|EIR73680.1| feS assembly protein SufD [Yersinia pestis PY-29]
gi|391523449|gb|EIR75758.1| feS assembly protein SufD [Yersinia pestis PY-34]
gi|391524508|gb|EIR76721.1| feS assembly protein SufD [Yersinia pestis PY-32]
gi|391536501|gb|EIR87478.1| feS assembly protein SufD [Yersinia pestis PY-36]
gi|391539234|gb|EIR89973.1| feS assembly protein SufD [Yersinia pestis PY-42]
gi|391541212|gb|EIR91775.1| feS assembly protein SufD [Yersinia pestis PY-45]
gi|391554344|gb|EIS03599.1| FeS assembly protein SufD [Yersinia pestis PY-46]
gi|391554818|gb|EIS04029.1| feS assembly protein SufD [Yersinia pestis PY-47]
gi|391556111|gb|EIS05222.1| feS assembly protein SufD [Yersinia pestis PY-48]
gi|391569499|gb|EIS17078.1| feS assembly protein SufD [Yersinia pestis PY-52]
gi|391570430|gb|EIS17897.1| FeS assembly protein SufD [Yersinia pestis PY-53]
gi|391577247|gb|EIS23700.1| feS assembly protein SufD [Yersinia pestis PY-54]
gi|391583126|gb|EIS28822.1| FeS assembly protein SufD [Yersinia pestis PY-55]
gi|391586097|gb|EIS31435.1| FeS assembly protein SufD [Yersinia pestis PY-56]
gi|391597344|gb|EIS41177.1| FeS assembly protein SufD [Yersinia pestis PY-58]
gi|391599214|gb|EIS42859.1| FeS assembly protein SufD [Yersinia pestis PY-60]
gi|391600924|gb|EIS44396.1| FeS assembly protein SufD [Yersinia pestis PY-59]
gi|391613833|gb|EIS55760.1| FeS assembly protein SufD [Yersinia pestis PY-61]
gi|391614395|gb|EIS56268.1| FeS assembly protein SufD [Yersinia pestis PY-63]
gi|391618744|gb|EIS60110.1| FeS assembly protein SufD [Yersinia pestis PY-64]
gi|391626315|gb|EIS66688.1| FeS assembly protein SufD [Yersinia pestis PY-65]
gi|391633983|gb|EIS73319.1| FeS assembly protein SufD [Yersinia pestis PY-66]
gi|391637267|gb|EIS76209.1| FeS assembly protein SufD [Yersinia pestis PY-71]
gi|391639776|gb|EIS78411.1| FeS assembly protein SufD [Yersinia pestis PY-72]
gi|391649310|gb|EIS86717.1| FeS assembly protein SufD [Yersinia pestis PY-76]
gi|391653571|gb|EIS90510.1| FeS assembly protein SufD [Yersinia pestis PY-88]
gi|391658257|gb|EIS94680.1| FeS assembly protein SufD [Yersinia pestis PY-89]
gi|391662314|gb|EIS98262.1| FeS assembly protein SufD [Yersinia pestis PY-90]
gi|391670331|gb|EIT05384.1| FeS assembly protein SufD [Yersinia pestis PY-91]
gi|391679587|gb|EIT13706.1| FeS assembly protein SufD [Yersinia pestis PY-93]
gi|391680851|gb|EIT14862.1| FeS assembly protein SufD [Yersinia pestis PY-92]
gi|391681689|gb|EIT15628.1| feS assembly protein SufD [Yersinia pestis PY-94]
gi|391693499|gb|EIT26244.1| FeS assembly protein SufD [Yersinia pestis PY-95]
gi|391696682|gb|EIT29144.1| FeS assembly protein SufD [Yersinia pestis PY-96]
gi|391698302|gb|EIT30623.1| FeS assembly protein SufD [Yersinia pestis PY-98]
gi|391708969|gb|EIT40185.1| FeS assembly protein SufD [Yersinia pestis PY-99]
gi|391714258|gb|EIT44933.1| FeS assembly protein SufD [Yersinia pestis PY-100]
gi|391714657|gb|EIT45293.1| FeS assembly protein SufD [Yersinia pestis PY-101]
gi|391725697|gb|EIT55132.1| FeS assembly protein SufD [Yersinia pestis PY-102]
gi|391728944|gb|EIT57987.1| FeS assembly protein SufD [Yersinia pestis PY-103]
gi|391734202|gb|EIT62484.1| FeS assembly protein SufD [Yersinia pestis PY-113]
gi|411175209|gb|EKS45235.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis INS]
Length = 441
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +P G + +YL L + GN DS + S+ R ++VE + +IE FV
Sbjct: 158 IRLPVGQHSDKSLYL--LHISSGN-DSDMVNTSHSRHHLVVEANAQAEVIEHFVSL-NEQ 213
Query: 255 CYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G ++ H ++ +S + AH R A + + G L
Sbjct: 214 PHFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGL 270
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G
Sbjct: 271 TRHNTSSQLNGEGSSLSMNSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMVR-ERG 327
Query: 370 QAVFDGNVKVNR 381
+A+F+G +KV +
Sbjct: 328 KAIFNGMIKVAK 339
>gi|11342548|emb|CAC17127.1| SufD protein [Erwinia chrysanthemi]
Length = 430
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 138/337 (40%), Gaps = 34/337 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS----------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
LP++S + Q+L D+++ Q ++ P RK E +++T + +
Sbjct: 4 LPTNSKAQQALQQWQRLFDTAAPRADEARQHWQQVMQLGIPHRKQEHWKYTPLERLLEHE 63
Query: 110 IQPITRPSSSLDVSTDA-QFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
S+ DA P LV +DG + LS+ G Y +++ +
Sbjct: 64 FATAATESAVTPAQRDALALPVDGWRLVFVDGRYSRA---LSDADTGPYQVAVIPSA--- 117
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
R + Q ++F + A + +I V G E P+YL ++S + L
Sbjct: 118 --RRQSGLPPIQP-EVFLHLTESLAAEQTLIQVDNGVTTEKPLYLLHIS----SGRPAAL 170
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ R + EG +IE + EG +++ + L + G+ + H L ++ ++
Sbjct: 171 NTLHYRHHARIGEGASATLIEHYASLEGA-AHFSGARLTIDAGENSRTEHYKLGFEAADS 229
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
H +R A+ G L+RH+ Q G ++S + ++ D
Sbjct: 230 YHFAHNDLRLARAAQLHSHSFLLGAGLTRHHTSAQMNGEGVTLSMNSLMVPTGNEVCD-- 287
Query: 345 SRLLLDHPRGY--CRQLHKCIVAHSLGQAVFDGNVKV 379
+R L+H +G+ RQLHK IV + VF+G +KV
Sbjct: 288 TRTYLEHNQGFGESRQLHKAIV-RDRARGVFNGLIKV 323
>gi|206579410|ref|YP_002238019.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae 342]
gi|206568468|gb|ACI10244.1| FeS assembly protein SufD [Klebsiella pneumoniae 342]
Length = 424
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 142/337 (42%), Gaps = 37/337 (10%)
Query: 60 LPSSSSSLPQPLPL------QKLRDSSS--QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS++L Q L Q+ +++ Q LL P+RK E +++T + +
Sbjct: 4 LPNSSNALQQWHHLFEAQGGQRTAEATQHLQQLLRLGLPTRKHEDWKYTPLDALLNGHFV 63
Query: 112 PITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
S S + P LV IDG L D + + D +
Sbjct: 64 ADEGASLSAEQRDALALPLDAWRLVFIDGRYH------PELSDDLAASGVEVSVDNQRQH 117
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
+ D + ++F + A + + VP +++ P+ L +++ + L +
Sbjct: 118 LPDALHP----EVFLHLTESLAQTVTRLRVPRNRRLDKPLLLMHITR---GLAGDALNTA 170
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNA 284
+ R + +E G E ++E ++ ++ L + + ++H L + S +
Sbjct: 171 HYRHHLALESGAEATVVEHYLSL-NEQPHFTGGRLTMTVADNAHLQHIKLAFENALSYHF 229
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
AH R +A + GG++ RH+ + G ++ L+S + V ++ D
Sbjct: 230 AHNDLLLGRDASAFSSSFL---LGGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCD-- 284
Query: 345 SRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
SR LDH GYC RQLHK IV+ G+AVF+G + V
Sbjct: 285 SRTWLDHQVGYCNSRQLHKTIVSDK-GRAVFNGLINV 320
>gi|149365689|ref|ZP_01887724.1| hypothetical protein YPE_0859 [Yersinia pestis CA88-4125]
gi|115348102|emb|CAL21029.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|149292102|gb|EDM42176.1| hypothetical protein YPE_0859 [Yersinia pestis CA88-4125]
Length = 407
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +P G + +YL L + GN DS + S+ R ++VE + +IE FV
Sbjct: 124 IRLPVGQHSDKSLYL--LHISSGN-DSDMVNTSHSRHHLVVEANAQAEVIEHFVSL-NEQ 179
Query: 255 CYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G ++ H ++ +S + AH R A + + G L
Sbjct: 180 PHFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGL 236
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G
Sbjct: 237 TRHNTSSQLNGEGSSLSMNSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMVR-ERG 293
Query: 370 QAVFDGNVKVNR 381
+A+F+G +KV +
Sbjct: 294 KAIFNGMIKVAK 305
>gi|307131458|ref|YP_003883474.1| SufD protein [Dickeya dadantii 3937]
gi|306528987|gb|ADM98917.1| SufD protein [Dickeya dadantii 3937]
Length = 430
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 138/337 (40%), Gaps = 34/337 (10%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS----------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
LP++S + Q+L D+++ Q ++ P RK E +++T + +
Sbjct: 4 LPTNSKAQQALQQWQRLFDTAAPRADEARQHWQQVMQLGIPHRKQEHWKYTPLERLLEHE 63
Query: 110 IQPITRPSSSLDVSTDA-QFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
S+ DA P LV +DG + LS+ G Y +++ +
Sbjct: 64 FATAATESAVTPAQRDALALPVDGWRLVFVDGRYSRA---LSDADTGPYQVAVIPSA--- 117
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
R + Q ++F + A + +I V G E P+YL ++S + L
Sbjct: 118 --RRQSGLPPIQP-EVFLHLTESLAAEQTLIQVDNGVTTEKPLYLLHIS----SGRPAAL 170
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ R + EG +IE + EG +++ + L + G+ + H L ++ ++
Sbjct: 171 NTLHYRHHARIGEGASATLIEHYASLEGA-AHFSGARLTIDAGENSRTEHYKLGFEAADS 229
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
H +R A+ G L+RH+ Q G ++S + ++ D
Sbjct: 230 YHFAHNDLRLARAAQLHSHSFLLGAGLTRHHTSAQMNGEGVTLSMNSLMVPTGNEVCD-- 287
Query: 345 SRLLLDHPRGY--CRQLHKCIVAHSLGQAVFDGNVKV 379
+R L+H +G+ RQLHK IV + VF+G +KV
Sbjct: 288 TRTYLEHNQGFGESRQLHKAIV-RDRARGVFNGLIKV 323
>gi|288935007|ref|YP_003439066.1| FeS assembly protein SufD [Klebsiella variicola At-22]
gi|288889716|gb|ADC58034.1| FeS assembly protein SufD [Klebsiella variicola At-22]
Length = 424
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 142/337 (42%), Gaps = 37/337 (10%)
Query: 60 LPSSSSSLPQPLPL------QKLRDSSS--QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS++L Q L Q+ +++ Q LL P+RK E +++T + +
Sbjct: 4 LPNSSNALQQWHHLFEAQGGQRTAEATQHLQQLLRLGLPTRKHEDWKYTPLDALLNGHFV 63
Query: 112 PITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
S S + P LV IDG L D + + D +
Sbjct: 64 ADEGASLSAEQRDALALPLDAWRLVFIDGRYH------PELSDDLAASGVEVSVDNQRQH 117
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
+ D + ++F + A + + VP +++ P+ L +++ + L +
Sbjct: 118 LPDALHP----EVFLHLTESLAQTVTRLRVPRNRRLDKPLLLMHITR---GLAGDALNTA 170
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNA 284
+ R + +E G E ++E ++ ++ L + + ++H L + S +
Sbjct: 171 HYRHHLALESGAEATVVEHYLSF-NEQPHFTGGRLTMTVADNAHLQHIKLAFENALSYHF 229
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
AH R +A + GG++ RH+ + G ++ L+S + V ++ D
Sbjct: 230 AHNDLLLGRDASAFSSSFL---LGGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCD-- 284
Query: 345 SRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
SR LDH GYC RQLHK IV+ G+AVF+G + V
Sbjct: 285 SRTWLDHQVGYCNSRQLHKTIVSDK-GRAVFNGLINV 320
>gi|409199078|ref|ZP_11227741.1| ABC transporter permease [Marinilabilia salmonicolor JCM 21150]
Length = 463
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 147/355 (41%), Gaps = 51/355 (14%)
Query: 50 IQLAESLED---SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK 106
I LAE ++ ++ S SSS+ L LRD + PS K E +++T+ +
Sbjct: 13 ISLAELFDENRAAIESHSSSV-----LNSLRDEAFDAFQELGIPSNKVENYKYTNLQPLF 67
Query: 107 SSQIQPITRPSS---------SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL 157
S +P + S DV T ++ L++G+ N LP G+ +GS+
Sbjct: 68 SGDFTFSLKPETLTENLEDIFSCDVDTLDSI-TIYLVNGWYYTRN-NPGVLPKGLVIGSM 125
Query: 158 LGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKY 211
++ K D I ++ D + N M A D ++VP G VE PI +
Sbjct: 126 AQMA----KENPDLIEKYYGTRAPHLSDGAVAFNTMFAQDGFFVHVPKGVAVERPIQIVN 181
Query: 212 LSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII----EEFVGKEGNDCYWANSVLEVVIG 267
+ + S+ ++ R +V++E+ E I+ GK + NSV E +G
Sbjct: 182 ILM------SEDALMTTQRNLVVMEDNSEARIMVCDHTLTTGK-----FVMNSVTEGYVG 230
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 327
K ++ LQNQ + Q S ++ ++R+N+ ++ G E
Sbjct: 231 KDARLDLYNLQNQHNATTQVAGFYFEQHENSHLATNNLTLHAGVARNNIELKLAGSHAEG 290
Query: 328 ELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIV-AHSLGQAVFDGNVKV 379
+LL D+ Q + + +DH P + +L K ++ HS G F G + V
Sbjct: 291 HAYGLYLL--DKNQHVDNFSYIDHAVPDCFSDELFKGVLDDHSTG--AFTGKIMV 341
>gi|401763371|ref|YP_006578378.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400174905|gb|AFP69754.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 422
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 150/339 (44%), Gaps = 43/339 (12%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
LP+SS++L Q L + + + S Q +L P+RK E +++T + S +
Sbjct: 4 LPNSSNALQQWHRLFEAQGNRSELAQQHLQQMLRLGLPTRKHENWKYTPLDGLLSGEF-- 61
Query: 113 ITRPSS-------SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
+ RP++ +L ++ DA LV +DG LS+ D G + ++D
Sbjct: 62 VARPAAIGPERRDALALTVDA--VRLVFVDGVYHPE---LSD--DTRESGYGIVINDERQ 114
Query: 166 KRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS--VEGGNVDSKK 223
+ E +F + A + I V + P+ L +++ VEG +++
Sbjct: 115 SLGAPVQPE-----VFLHLTESLARSVTHIQVKRNQRPARPLLLMHITQGVEGDEINT-- 167
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSL 282
++ R + + EG + +IE +V ND ++ S L + + ++ H L ++
Sbjct: 168 ---AHYRHHLELAEGADATVIEHYVSL--NDTRHFTGSRLTMNVAANAQLHHIKLAFENP 222
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
+ H + + GG + RHN Q G +T ++S + V + D
Sbjct: 223 QSHHFAHNDILLGPDAAAYSHSFLLGGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCD 282
Query: 343 LHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 283 --TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 318
>gi|357029337|ref|ZP_09091335.1| FeS assembly protein SufD [Mesorhizobium amorphae CCNWGS0123]
gi|355535256|gb|EHH04545.1| FeS assembly protein SufD [Mesorhizobium amorphae CCNWGS0123]
Length = 422
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 145/340 (42%), Gaps = 46/340 (13%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L D+ S LP + RD + + + P+R+ E + +TD + +S P
Sbjct: 15 ALIDAFGERLSLLPGDGAVMLKRDDAIEAI-KHGLPTRRVESWHYTDLRRLLTSV--PAF 71
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLP--DGVYVGSLLGVSDGIMKRVSDFI 172
P+++ T A P I+ SA+ LP DGV L + ++R+S+ +
Sbjct: 72 DPAAA----TKAIAP-------VIEGSAV----LPLLDGVSTAKLPDIEGVTVQRLSEKL 116
Query: 173 SE---------FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
++ + D ++N D + + G +++ P+ L+ L G
Sbjct: 117 TDGSVAPGLDPYGADDAIGALNTAFVADGYFVDIADGAELDRPLELQNLQSAGQ------ 170
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++ R++ V +G + I+E + G +SV ++V+G+G +V +Q Q
Sbjct: 171 ---THVRLLTRVGDGAKATIVER---QTGEGAALVSSVSQLVLGEGAEVTWLIVQEQPDT 224
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
A H+ S L ++ GGKL R + V+ G + +L +LL D D+
Sbjct: 225 ATHLAQFKAHLGKNSKLTLFVMNAGGKLVRQEIVVRTTGEGADFKLRGINLLAGDTHTDV 284
Query: 344 HSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
++LDH P ++ + +V + VF G + V++
Sbjct: 285 --TMVLDHAVPHTTSTEVIRNVVTGK-ARGVFQGRINVHQ 321
>gi|443673146|ref|ZP_21138217.1| Iron-regulated ABC transporter membrane component SufB [Rhodococcus
sp. AW25M09]
gi|443414307|emb|CCQ16555.1| Iron-regulated ABC transporter membrane component SufB [Rhodococcus
sp. AW25M09]
Length = 481
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IY+P G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYIPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 255 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWVDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S DQ QD S++L P + K VA G+ +
Sbjct: 315 YPAVWMTGEYAKGEVLSVAFAGPDQHQDTGSKMLHLAPHTSSNIVSKS-VARGGGRTSYR 373
Query: 375 GNVKVNR 381
G +++N+
Sbjct: 374 GLIQINK 380
>gi|425091950|ref|ZP_18495035.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|405613009|gb|EKB85760.1| FeS cluster assembly protein sufD [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 424
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 142/337 (42%), Gaps = 37/337 (10%)
Query: 60 LPSSSSSLPQPLPL------QKLRDSSS--QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS++L Q L Q+ +++ Q LL P+RK E +++T + +
Sbjct: 4 LPNSSNALQQWHHLFEAQGGQRTAEATQHLQQLLRLGLPTRKHEDWKYTPLDALLNGHFV 63
Query: 112 PITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
S S + P LV IDG L D + + D +
Sbjct: 64 ADEGASLSAEQRDALALPLDAWRLVFIDGRYH------PELSDDLAASGVEVSVDNQRQH 117
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
+ D + ++F + A + + VP +++ P+ L +++ + L +
Sbjct: 118 LPDALHP----EVFLHLTESLAQTVTRLRVPRNRRLDKPLLLMHITR---GLAGDALNTA 170
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNA 284
+ R + +E G E ++E ++ ++ L + + ++H L + S +
Sbjct: 171 HYRHHLALESGAEATVVEHYLSF-NEQPHFTGGRLTMTVADNAHLQHIKLAFENALSYHF 229
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
AH R +A + GG++ RH+ + G ++ L+S + V ++ D
Sbjct: 230 AHNDLLLGRDASAFSSSFL---LGGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCD-- 284
Query: 345 SRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
SR LDH GYC RQLHK IV+ G+AVF+G + V
Sbjct: 285 SRTWLDHQVGYCTSRQLHKTIVSDK-GRAVFNGLINV 320
>gi|168240881|ref|ZP_02665813.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194451686|ref|YP_002045377.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|386591222|ref|YP_006087622.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|419729103|ref|ZP_14256064.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419734484|ref|ZP_14261374.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419737527|ref|ZP_14264317.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419744960|ref|ZP_14271606.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419749247|ref|ZP_14275732.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|421570815|ref|ZP_16016500.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|421573850|ref|ZP_16019481.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|421580678|ref|ZP_16026232.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|421586538|ref|ZP_16032019.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|194409990|gb|ACF70209.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205339301|gb|EDZ26065.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|381297337|gb|EIC38429.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381297806|gb|EIC38892.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381304881|gb|EIC45836.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381307167|gb|EIC48031.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|381311737|gb|EIC52548.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|383798266|gb|AFH45348.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|402519173|gb|EJW26536.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|402523395|gb|EJW30713.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|402526629|gb|EJW33900.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|402527937|gb|EJW35195.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
Length = 423
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 147/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTD-TSMIKSSQI 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T +I S I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLIHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQ HK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQSHKTIVSDK-GRAVFNGLINV 319
>gi|15838075|ref|NP_298763.1| ABC transporter membrane protein [Xylella fastidiosa 9a5c]
gi|9106498|gb|AAF84283.1|AE003977_6 ABC transporter membrane protein [Xylella fastidiosa 9a5c]
Length = 422
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 133/297 (44%), Gaps = 14/297 (4%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSN 147
PS + E +++T ++ P ++++D + P+ LV I+G S NLS
Sbjct: 33 PSLRSETWKYTSLRALEERHFTPAPTTATTIDPAWLNTIPTPRLVFINGRHSPSLSNLSG 92
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENP 206
LP G+ + L K + F+ D F +N A + ++ V V P
Sbjct: 93 LPQGITIHPLSAPPTEQDKGLHRTPPHFKHRDETFARLNTALADEGVLLRVHQNITVNTP 152
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
I+L +++ G +D + R + + G + +IE + G+ + N + + +
Sbjct: 153 IHLIFIT-PAGEIDHAW----HLRNQIELHCGASLQLIEHQL-HTGHAAHLNNVLTRIHL 206
Query: 267 GKGGKVRHSYLQNQ-SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
G + H+ LQN + + ++ AV + A Y V+V G KLSRH ++V+ G +
Sbjct: 207 APGACLEHARLQNDATATTSFLRTDAVLAQDAE-YRRVDVELGAKLSRHELNVRLEGDN- 264
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L++ +L+ T+ L +RL ++H R +L + + VF G + +++
Sbjct: 265 -ARLTANGILLGHLTRHLDTRLHIEHIARNTASELLWRGIGTDRSRVVFHGGIHIHQ 320
>gi|150026421|ref|YP_001297247.1| Fe-S assembly protein, SufD [Flavobacterium psychrophilum JIP02/86]
gi|149772962|emb|CAL44446.1| Fe-S assembly protein, SufD [Flavobacterium psychrophilum JIP02/86]
Length = 438
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 145/343 (42%), Gaps = 29/343 (8%)
Query: 56 LEDSLPSSSSSLPQPLPL-QKLRDSSSQTLL---STPWPSRKDEPFRFTDTSMIKSSQIQ 111
L++ L SS + + + Q+L D SQ + S +P++K+E +++T + I +
Sbjct: 3 LKEKLLSSFMAFEEKIDFHQELHDVRSQAIKNFESKGFPTKKEEAWKYTSLNTILKNDFS 62
Query: 112 PITRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ ++++ ++ +V IDG S+ S DG+ V + S +
Sbjct: 63 VFPKKENTIEFKEVKKYFIHEIDTFKVVFIDGIF--SSFLSSTSHDGLDVCLM---SSAL 117
Query: 165 MK-----RVSDFISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
K ++ ++ ++ + S+N A + I +P VE PI + Y S
Sbjct: 118 NKPKYKIQIDEYFNKIASKEESLTSLNTAFASEGAYINIPKSKVVEKPIEIIYFST---- 173
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
++ + PR +V+V E V I+E N NSV E+ K V + +Q
Sbjct: 174 -GAEAALMVQPRNLVIVGENAHVQIMERHQSLNDNPV-LTNSVTEIFAQKRAVVDYYKVQ 231
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
N A I T + Q+ S + S GG ++R+N++ G + L ++ +
Sbjct: 232 NDVQTANLIDNTYIAQKQESHVSVHTFSFGGNITRNNLNFYHQGERIYSTLKGVTIIGNK 291
Query: 339 QTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q D ++ + P Q +K I+ S VF+G + V +
Sbjct: 292 QHVDHYTLVQHATPNCESHQNYKTILDGS-STGVFNGKIFVEK 333
>gi|153947648|ref|YP_001400719.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis IP 31758]
gi|152959143|gb|ABS46604.1| FeS assembly protein SufD [Yersinia pseudotuberculosis IP 31758]
Length = 441
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +P G + P+YL L + GN S + S+ R ++VE + +IE FV
Sbjct: 158 IRLPVGQHSDKPLYL--LHISSGN-SSDMVNTSHSRHHLVVEANAQAEVIEHFVSL-NEQ 213
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L + +G ++ H L + S + AH R A + + G L
Sbjct: 214 PHFTGARLTISLGDNAELNHCKLAFETPKSYHFAHNDLVLGRDARARSHSFL---LGAGL 270
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
+RHN Q G + ++S L V + D +R L+H +G+C RQLHK +V G
Sbjct: 271 TRHNTSSQLNGEGSSLSINSLLLPVGREICD--TRTYLEHNKGHCESRQLHKVMV-RERG 327
Query: 370 QAVFDGNVKVNR 381
+A+F+G +KV +
Sbjct: 328 KAIFNGMIKVAK 339
>gi|162606194|ref|XP_001713612.1| hypothetical protein GTHECHR1114 [Guillardia theta]
gi|13794532|gb|AAK39907.1|AF165818_115 hypothetical protein [Guillardia theta]
Length = 467
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 134/305 (43%), Gaps = 30/305 (9%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQP------ITRPSSSLDVSTDAQFPS--LVLIDGFIQN 140
+PS+ DE +RFTD + + I +++ F + LV D +
Sbjct: 80 FPSKNDEVWRFTDLKKLYNLNFNKHPSESDILEFCDKINIENKIIFENGKLVYFDKTLSE 139
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---DLFWSINGMGAPDLGVIYV 197
+ + + + +++ K+V + + +CG F +N D+ ++
Sbjct: 140 NKM--------IEIKKFTELNNDEKKKVLELSNSGECGISGGFFSILNITSINDIYILKF 191
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV--GIIEEFVGKEGNDC 255
+E I L +S+ G + +++++ S R++VL+E EV +I KE D
Sbjct: 192 NEDFTIETNINL--ISI-GASNENQEIGFS-KRLLVLLENKSEVKFNLINTSTKKE--DI 245
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA-VRQETASGYELVEVSTGGKLSRH 314
Y+ NS + + + + + N S+ +++I T V S + +S GG R
Sbjct: 246 YFENSCINFYLKENSNLVLQNINN-SVGSSNIMNTIHVDLNKGSFFTFNSISFGGDFERI 304
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
N+ V GP+++ +L+ + ++ D+HSR+ + P Q K I+ ++ A+F
Sbjct: 305 NIGVDMNGPESQCKLNGVFINHQNKIADIHSRISHNFPNCKSSQFQKNIL-NNFSHAIFA 363
Query: 375 GNVKV 379
G +++
Sbjct: 364 GKIQI 368
>gi|422332942|ref|ZP_16413954.1| FeS cluster assembly protein sufD [Escherichia coli 4_1_47FAA]
gi|373246071|gb|EHP65532.1| FeS cluster assembly protein sufD [Escherichia coli 4_1_47FAA]
Length = 423
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 136/307 (44%), Gaps = 48/307 (15%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPIT-----RPSSSLDVSTDAQFPSLVLIDGFIQNS 141
T P+RK E +++T + +SQ I + +L ++ DA LV +DG
Sbjct: 39 TGLPTRKHENWKYTPLEGLTNSQFVCIAGEISPQQRDALALTLDA--VRLVFVDG----- 91
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGV 194
YV +L ++G VS I++ + G ++F + A +
Sbjct: 92 ----------RYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAHSVTH 139
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I V G + P+ L +++ V +++ ++ R + + EG E +IE FV ND
Sbjct: 140 IAVKRGQRPVKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--ND 194
Query: 255 C-YWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + + + ++H L + S + AH TA + + GG
Sbjct: 195 ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDATAFSHSYL---LGGA 251
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RHN Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+
Sbjct: 252 VLRHNTSSQLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK- 308
Query: 369 GQAVFDG 375
G+AVF+G
Sbjct: 309 GRAVFNG 315
>gi|422014535|ref|ZP_16361145.1| cysteine desulfurase activator complex subunit SufD [Providencia
burhodogranariea DSM 19968]
gi|414100755|gb|EKT62366.1| cysteine desulfurase activator complex subunit SufD [Providencia
burhodogranariea DSM 19968]
Length = 434
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 23/243 (9%)
Query: 148 LPDGVYVGSLLGVSDGIMKRV----SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV 203
L DG Y +L V G + D + + ++F + A VI++ A
Sbjct: 102 LVDGRYSSTLSSVDMGPFQVALLDNQDMLPDAVNSEIFLHLTESLAQQPIVIHLAANQIA 161
Query: 204 ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLE 263
+ P+YL L++ G+ D ++ S R + ++ + +IE FV + ++ S L
Sbjct: 162 QKPLYL--LNISSGH-DGTEVNTSQYRYHITLDTNSKAQVIEHFVSF-NDKAHFTGSRLT 217
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHIKWTAV-----RQETASGYELVEVSTGGKLSRHNVHV 318
V +G + RH L N++ A H + Q +S + L G KL+R++
Sbjct: 218 VEVGDNAQYRHFKLNNENNQAQHFAHNDIVVGRDSQVLSSSFLL-----GAKLTRNHSSA 272
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 376
Q G L+S L + D +R L+H G+C RQLHK I S +AVF+G
Sbjct: 273 QLEGESANLSLNSLLLPKDAEIAD--TRTYLEHNAGHCTSRQLHKVIAMDS-SKAVFNGV 329
Query: 377 VKV 379
+KV
Sbjct: 330 IKV 332
>gi|261822004|ref|YP_003260110.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
wasabiae WPP163]
gi|261606017|gb|ACX88503.1| FeS assembly protein SufD [Pectobacterium wasabiae WPP163]
Length = 448
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I + AG + E P+YL ++S + + L + R + VE G IIE +V + +
Sbjct: 159 LIRLAAGQQAEKPLYLLHIS----SSQTAALNTVHHRHHLNVERGASAEIIEHYVSLDEH 214
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQS---LNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + L V + +V H L ++ + AH R + + G
Sbjct: 215 -AHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHNDLVLARDARVRSHSFL---LGAG 270
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVAHSL 368
L+RH+ Q G T ++S L V + D +R L+H +GY RQLHK IV +
Sbjct: 271 LTRHHTSAQLNGEGTNLSMNSLILPVGSEVCD--TRTYLEHNQGYGESRQLHKVIV-NDR 327
Query: 369 GQAVFDGNVKV 379
+AVF+G +KV
Sbjct: 328 ARAVFNGMIKV 338
>gi|378826027|ref|YP_005188759.1| ABC transporter involved in Fe-S cluster assembly [Sinorhizobium
fredii HH103]
gi|365179079|emb|CCE95934.1| ABC transporter involved in Fe-S cluster assembly [Sinorhizobium
fredii HH103]
Length = 425
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 28/332 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L D+ + LP + LRD+ L + P+R+ E + +TD + + P
Sbjct: 15 ALVDAYTAQIGDLPGDGAVLSLRDTLVHELKTAGLPTRRVESWHYTDLRTLLRA--VPSA 72
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGV----YVGSLLGVSDGIMKRVSD 170
PS+ D D P ++ ++N +L +LP+GV Y SLL DG
Sbjct: 73 DPSAFAD-RVDPIVPGSSVLS--VRNGQADLKSLPEGVTARSYTESLL---DG---SAVA 123
Query: 171 FISEFQCGDLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
++ D ING G G+ I + G + E P+ ++ G ++
Sbjct: 124 GLAVLGSDDAIGRING-GLVGGGLEIALAEGAEFEAPLEIQIAQSHGQ---------AHT 173
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
R V G + +IE + G D + +SV ++ + +G V LQ Q H+
Sbjct: 174 RFPVSFGAGSKATVIERHLSTNG-DASFVSSVTDLTLAEGADVIWIILQQQGPADTHLGQ 232
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
+ LV ++ GGKL R +H + G + L +LL D D+ L
Sbjct: 233 IRFDLGKDAKLHLVVINAGGKLVRQELHGKASGEGADLTLRGINLLGGDSHTDVTFTLSH 292
Query: 350 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D P ++ + +V + VF G + V +
Sbjct: 293 DVPHTTSTEIIRNVV-FDRAKGVFQGKILVAK 323
>gi|333381976|ref|ZP_08473654.1| hypothetical protein HMPREF9455_01820 [Dysgonomonas gadei ATCC
BAA-286]
gi|332829537|gb|EGK02186.1| hypothetical protein HMPREF9455_01820 [Dysgonomonas gadei ATCC
BAA-286]
Length = 446
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 142/328 (43%), Gaps = 36/328 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL----- 120
L RD + + +P++K E + + D + + +++ P +
Sbjct: 25 LNSQRDKAFEAFRKQGFPTKKLEDYLYLDVAAEFMPDFGLNLNRVPFQGNPYVAFRCEIP 84
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL 180
+++T+ F VL D F Q + + P GV+VGSL ++ + S + Q D+
Sbjct: 85 NMTTNLYF---VLNDLFHQEHSPQVE-YPKGVFVGSLKQFAEEKPEVCSKYYG--QIADV 138
Query: 181 ----FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ N M A D IYVP G VE PI L + + S+ + N R++++ E
Sbjct: 139 NNNGIIAFNTMFAQDGLAIYVPKGVIVEEPIQLINI------LKSEFNYLVNRRILIIAE 192
Query: 237 EGGEVG-IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
+ +V +I + E + + A V E+ G+ V L+ S + T V QE
Sbjct: 193 DDAQVKLLICDHTVDESH--FLATQVTEIYAGRNAVVDCYDLEENSDKVTRLTNTFVLQE 250
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
+S + ++ +SR+N +V+ G E + ++++D+ Q + + LDH + +
Sbjct: 251 GSSNVLVNNMTLNTGVSRNNYNVKLNGEHAEAYVCG--MVIADRQQYVDNFAFLDHAKPH 308
Query: 356 C--RQLHKCIVAHSLGQAVFDGNVKVNR 381
C QL K V + F G + V +
Sbjct: 309 CTSTQLFK-YVLQDEAKGSFCGRILVEK 335
>gi|292488155|ref|YP_003531036.1| FeS assembly protein SufD [Erwinia amylovora CFBP1430]
gi|292899365|ref|YP_003538734.1| SufB-SufC-SufD cysteine desulfurase activator complex protein
[Erwinia amylovora ATCC 49946]
gi|428785092|ref|ZP_19002583.1| FeS assembly protein SufD [Erwinia amylovora ACW56400]
gi|291199213|emb|CBJ46328.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Erwinia amylovora ATCC 49946]
gi|291553583|emb|CBA20628.1| FeS assembly protein SufD [Erwinia amylovora CFBP1430]
gi|426276654|gb|EKV54381.1| FeS assembly protein SufD [Erwinia amylovora ACW56400]
Length = 426
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 134/311 (43%), Gaps = 32/311 (10%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSS---LDVSTDAQFPSLVLID 135
Q LL T P+RK E +++T + ++Q +P + + L + DA LV ID
Sbjct: 35 QQLLRTGLPTRKQEDWKYTPLDQLLNNQFVMPEPAALDAEAIKALALPIDA--VRLVFID 92
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G L D + + ++ +R +SE ++F + A + +
Sbjct: 93 GRFS------PELSDSEHDLFTIRIAQSAERRE---LSEPVHPEVFLHLTESLAEQVTFM 143
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+ G P+YL L + G+ + +L S+ R + ++E E +IE ++ +
Sbjct: 144 QLARGKAAARPLYL--LHISSGST-AGELNTSHYRHHLQLDEAAEATVIEHYLSLDAAP- 199
Query: 256 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + +G + H ++ S + +H T R + + G L+
Sbjct: 200 HFTGARFTAEVGNNAALTHYNLAFEDRSSYHLSHNDLTLGRDTRVQSHSFL---LGAGLT 256
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RH+ + G + ++S L + + D SR L+H +GYC RQLHK IV +
Sbjct: 257 RHHTSTRLDGEGSFLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV-RDRAR 313
Query: 371 AVFDGNVKVNR 381
AVF+G +KV +
Sbjct: 314 AVFNGIIKVAK 324
>gi|255012622|ref|ZP_05284748.1| putative ABC transporter protein [Bacteroides sp. 2_1_7]
gi|410102455|ref|ZP_11297381.1| FeS assembly protein SufD [Parabacteroides sp. D25]
gi|409238527|gb|EKN31318.1| FeS assembly protein SufD [Parabacteroides sp. D25]
Length = 450
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 22/319 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQF 128
+ LR + +PS + E +++TD + + I + P + DV
Sbjct: 29 MNALRADALANFERLGFPSTRSEDYKYTDVAQAFAPDYGLNINRVAIPVNPYDVFR-CDV 87
Query: 129 PSLVLIDGFIQNSA-----LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
P+L F+ N L ++LP+GVY G L ++ + S + + D
Sbjct: 88 PNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGGLKAFTEQYPEIASKYYGKAAPSSKDGI 147
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N M A D V+YVP VE PI L +++ +VD+ ++N RV+V++E E
Sbjct: 148 IALNTMLAQDGFVVYVPKNVVVERPIQL--VNIFRNDVDT----MANRRVLVIMEPHSEA 201
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
++ +G + A V+E+ +G + + L+ S++ VRQ ++
Sbjct: 202 KLLVCDHSIDGVK-FLATQVVEIFAEEGARFDYYDLEESSVSTTRFSSVHVRQAASTNVL 260
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 361
+ ++ L+R+N +V+ G E+ L +L +Q D +S + P +L K
Sbjct: 261 VNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFK 320
Query: 362 CIVA-HSLGQAVFDGNVKV 379
++ H++G VF G + V
Sbjct: 321 NVLNDHAVG--VFSGRILV 337
>gi|108799403|ref|YP_639600.1| FeS assembly protein SufB [Mycobacterium sp. MCS]
gi|119868516|ref|YP_938468.1| FeS assembly protein SufB [Mycobacterium sp. KMS]
gi|126435056|ref|YP_001070747.1| FeS assembly protein SufB [Mycobacterium sp. JLS]
gi|108769822|gb|ABG08544.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. MCS]
gi|119694605|gb|ABL91678.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. KMS]
gi|126234856|gb|ABN98256.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. JLS]
Length = 487
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 208 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 260
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ GG+ R++ +QN S N ++ R E + E V+ + G K++
Sbjct: 261 DSLHSAVVEIIVKPGGRCRYTTIQNWSNNVYNLVTKRARAEAGATMEWVDGNIGSKVTMK 320
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD +++L P+ + K VA G+A +
Sbjct: 321 YPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPQTSSNIVSKS-VARGGGRASYR 379
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 380 GLVQVNK 386
>gi|401676078|ref|ZP_10808064.1| SufD Protein [Enterobacter sp. SST3]
gi|400216564|gb|EJO47464.1| SufD Protein [Enterobacter sp. SST3]
Length = 423
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 147/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS++L Q L + + ++ Q +L P+RK E +++T + +++
Sbjct: 4 LPNSSNALQQWHRLFEAQGNTRSEQAQQHLQQMLRLGLPTRKHENWKYTPLDGLLNAEF- 62
Query: 112 PITRPSS-------SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+TR + +L V DA LV +DG + L D + G
Sbjct: 63 -VTRLADLTPAQRDALAVGVDA--VRLVFVDGQFR------PELSDTLQ-------ESGF 106
Query: 165 MKRVSDFISEFQCG---DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
++D ++F + A + I V + P+ L +++ +D
Sbjct: 107 EIEINDDRQRLNAPVQPEVFLHLTESLARSVTHIGVKRNQRPAKPLLLMHIT---QGLDG 163
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH---SYLQ 278
++ ++ R + + EG E +IE +V ++ S L + + ++ H ++
Sbjct: 164 AEINTAHYRHHLELAEGAEATVIEHYVSL-NETRHFTGSRLTMNVAANAQLHHIKLAFEN 222
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
QS + AH + A + + GG + RHN Q G +T ++S + V
Sbjct: 223 AQSHHFAHNDIVLGQDAAAYSHSFL---LGGAVLRHNTSTQLNGENTTLRINSLAMPVKS 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|213585085|ref|ZP_03366911.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 345
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 9/176 (5%)
Query: 206 PIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
P+ L +++ VDS +L ++ R + + EG E +IE +V ++ + L +
Sbjct: 73 PLLLMHIT---QGVDSDELNTAHYRHHLTLAEGAEATVIEHYVSLTAAK-HFTGARLTMN 128
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
+ ++RH L ++ ++ H + T + G + RH+ Q G +
Sbjct: 129 VADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENA 188
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
L+S + V ++ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 189 TLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 241
>gi|256838941|ref|ZP_05544451.1| FeS assembly protein SufD [Parabacteroides sp. D13]
gi|298374488|ref|ZP_06984446.1| FeS assembly protein SufD [Bacteroides sp. 3_1_19]
gi|256739860|gb|EEU53184.1| FeS assembly protein SufD [Parabacteroides sp. D13]
gi|298268856|gb|EFI10511.1| FeS assembly protein SufD [Bacteroides sp. 3_1_19]
Length = 450
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 143/320 (44%), Gaps = 24/320 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQF 128
+ LR + +PS + E +++TD + + I + P + DV
Sbjct: 29 MNALRAEALANFERLGFPSTRSEDYKYTDVAQAFAPDYGLNINRVAIPVNPYDVFR-CDV 87
Query: 129 PSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
P+L +++ + L ++LP+GVY G L ++ + S + + D
Sbjct: 88 PNLSTSLYFVVNDTFYDKELPKAHLPEGVYAGGLKAFTEQYPEIASKYYGKAAPSSKDGI 147
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N M A D V+YVP VE PI L +++ +VD+ ++N RV+V++E E
Sbjct: 148 IALNTMLAQDGFVVYVPKNVVVERPIQL--VNIFRSDVDT----MANRRVLVIMEPHSEA 201
Query: 242 GIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
++ +D + A V+E+ +G + + L+ S++ VRQ ++
Sbjct: 202 KLL--VCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEESSVSTTRFSSVHVRQAASANV 259
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ ++ L+R+N +V+ G E+ L +L +Q D +S + P +L
Sbjct: 260 LVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELF 319
Query: 361 KCIVA-HSLGQAVFDGNVKV 379
K ++ H++G VF G + V
Sbjct: 320 KNVLNDHAVG--VFSGRILV 337
>gi|289805590|ref|ZP_06536219.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 273
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VDS +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 42 VDSDELNTAHYRHHLTLAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 100
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 101 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 160
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 161 EVCD--TRTWLEHNKGYCNSRQLHKTIVS-DKGRAVFNGLINV 200
>gi|71732540|gb|EAO34593.1| FeS assembly protein SufD [Xylella fastidiosa subsp. sandyi Ann-1]
Length = 422
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 131/297 (44%), Gaps = 14/297 (4%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSN 147
P + E +++T ++ ++++D + P+ LV ++G S NLS
Sbjct: 33 PDLRSETWKYTSLRTLERRHFTQAPTAATAIDPTWLNTIPTPRLVFVNGRHSPSLSNLSG 92
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENP 206
LP G+ + L K + F+ D F +N A + ++ V V P
Sbjct: 93 LPQGMTLHPLSAPPREQDKGLHRSPPHFKHRDETFARLNTALADEGVLLRVHQNITVNTP 152
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
I+L +++ G +D + R + + G + +IE + G+ + N + + +
Sbjct: 153 IHLIFIT-PAGEIDHAW----HLRNQIELHRGASLQLIEHQL-HTGHAAHLNNVLTRIHL 206
Query: 267 GKGGKVRHSYLQNQSL-NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
G + H+ LQN + + ++ AV + A Y V+V G KLSRH ++V+ G +
Sbjct: 207 ASGACLEHARLQNDATATTSFLRTDAVLAQDAE-YRRVDVELGAKLSRHELNVRLEGDN- 264
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L++ +L+ T+ L +RL ++H R +L + + VF G + +++
Sbjct: 265 -ARLTANGILLGHLTRHLDTRLHIEHIARNTASELLWRGIGTDRSRVVFHGGIHIHQ 320
>gi|29348817|ref|NP_812320.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|383124992|ref|ZP_09945651.1| FeS assembly protein SufD [Bacteroides sp. 1_1_6]
gi|29340723|gb|AAO78514.1| conserved hypothetical protein, putative ABC transporter permease
component [Bacteroides thetaiotaomicron VPI-5482]
gi|251840857|gb|EES68938.1| FeS assembly protein SufD [Bacteroides sp. 1_1_6]
Length = 447
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 119/281 (42%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++Q P DV + V+ D F
Sbjct: 42 FPTRKMEKYKYTDISKYFEPDYGLNLNRLQIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL ++LP+GV GSL V+ + V + + D + N A D + YV
Sbjct: 101 NKALPKTHLPEGVIFGSLKEVAAEHPELVKKYYGKLADTSKDGITAFNTAFAQDGVIFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVIVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV G+ L+ + I V+QE S L ++ +R+
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIADKNQHVDNNTSIDHAVPNC 310
>gi|328543979|ref|YP_004304088.1| FeS assembly protein SufD [Polymorphum gilvum SL003B-26A1]
gi|326413723|gb|ADZ70786.1| FeS assembly protein SufD [Polymorphum gilvum SL003B-26A1]
Length = 440
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 144/347 (41%), Gaps = 38/347 (10%)
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQ 109
Q L + S +SL + LR+++ T P R+ E +++TD + +K +
Sbjct: 11 QAETDLAEQFERSRTSLAGGAEIAALRNAAFDRFSQTGLPHRRVEEWKYTDLRAYMKGAA 70
Query: 110 --IQPITRPSS-----SLDVSTDAQFPSLVLIDGFIQNSALNLSNL-PDGVYVGSLLGVS 161
P+T ++ + D + LVL +G + +L+ L GV V ++
Sbjct: 71 PLADPVTAQAAGPALEAADAYGGLERFRLVLANGRLVAELSDLNALDAAGVTVRD---IN 127
Query: 162 DGIMKRVSDFISEFQC-----GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
DG+ SD QC G+ +N + V AG +V+ P+ + +L+V
Sbjct: 128 DGLAN--SDAAKLLQCPAIAQGNALVDLNTALVQGGVTVAVEAGRRVDKPVEIVHLTVGA 185
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRH 274
G S R + + EG E+ ++E F VG G N+V + +GKG +
Sbjct: 186 G--------ASFSRCRIALGEGAELTLLESFASVGAGGE----TNAVSDYDLGKGAILAS 233
Query: 275 SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHL 334
L + + + AH+ + R + + + G +R+ V G +L +
Sbjct: 234 VRLMSGAGSHAHVSTSFARLAGDAHLKTLGFVVGTAFARNQSFVSFAGEGARADLFGVTM 293
Query: 335 LVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ DQ D L++DH +C R+ K ++ +AV+ G + V
Sbjct: 294 VRGDQLAD--QTLVVDHAVPHCDSREYFKSVI-DGRAKAVYQGKIIV 337
>gi|437817793|ref|ZP_20842776.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
gi|435308133|gb|ELO83138.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
Length = 423
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 146/349 (41%), Gaps = 62/349 (17%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLS------NLPDGV 152
Q S++ L + DA LV +DG F+ QNS ++S L V
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVSVRDERQTLAVPV 121
Query: 153 YVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYL 212
+ L +++ + QC + I V + P+ L ++
Sbjct: 122 HPEVFLHLTESLA----------QC--------------VTYIQVRRNQRPTRPLLLMHI 157
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+ VD +L ++ R + + EG E +IE +V ++ + L + + ++
Sbjct: 158 T---QGVDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNARL 213
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSF 332
RH L ++ ++ H + T + G + RH+ Q G + L+S
Sbjct: 214 RHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSL 273
Query: 333 HLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ V ++ D +R L+H +GYC RQLHK IV+ G+ VF+G + V
Sbjct: 274 AMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRTVFNGLINV 319
>gi|333919571|ref|YP_004493152.1| hypothetical protein AS9A_1903 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481792|gb|AEF40352.1| hypothetical protein AS9A_1903 [Amycolicicoccus subflavus DQS3-9A1]
Length = 484
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+V+ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 258 DSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 317
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD +++L P + K VA G+A +
Sbjct: 318 YPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIISKS-VARGGGRASYR 376
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 377 GLVQVNK 383
>gi|262382595|ref|ZP_06075732.1| FeS assembly protein SufD [Bacteroides sp. 2_1_33B]
gi|262295473|gb|EEY83404.1| FeS assembly protein SufD [Bacteroides sp. 2_1_33B]
Length = 450
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 142/320 (44%), Gaps = 24/320 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQF 128
+ LR + +PS + E +++TD + + I + P + DV
Sbjct: 29 MNALRADALANFERLGFPSTRSEDYKYTDVAQAFAPDYGLNINRVAIPVNPYDVFR-CDV 87
Query: 129 PSLVLIDGFIQNSA-----LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
P+L F+ N L ++LP+GVY G L ++ + S + + D
Sbjct: 88 PNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGGLKAFTEQYPEIASKYYGKAAPSSKDGI 147
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N M A D V+YVP VE PI L +++ +VD+ ++N RV+V++E E
Sbjct: 148 IALNTMLAQDGFVVYVPKNVVVERPIQL--VNIFRNDVDT----MANRRVLVIMEPHSEA 201
Query: 242 GIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
++ +D + A V+E+ +G + + L+ S++ VRQ ++
Sbjct: 202 KLL--VCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEESSVSTTRFSSVHVRQAASTNV 259
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ ++ L+R+N +V+ G E+ L +L +Q D +S + P +L
Sbjct: 260 LVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELF 319
Query: 361 KCIVA-HSLGQAVFDGNVKV 379
K ++ H++G VF G + V
Sbjct: 320 KNVLNDHAVG--VFSGRILV 337
>gi|87118502|ref|ZP_01074401.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
gi|86166136|gb|EAQ67402.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
Length = 420
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 40/320 (12%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDG 136
RD + L WP+RK E +++T ++P+ + S + S ++ SL IDG
Sbjct: 23 RDLALSALADVRWPTRKTEAWKYT--------SLRPVEKFSKTAPASF-SKASSLTQIDG 73
Query: 137 F------IQN----SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFW 182
F +N + L LP+G+ S+ S + +D +S+F +F
Sbjct: 74 FECLDLVFENGQFVTDLAELTLPEGL---SIQLASQADSAKQADVLSKFSSIKPERHVFG 130
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYL-KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
+N D+ VI V V + L LS+ ++ RV+V++ E ++
Sbjct: 131 LLNDALVQDVLVIEVADNVSVAPALRLTSILSLAAQ---------AHTRVLVVLGEHAKL 181
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYE 301
+ E + +GN+ +E IG ++ H Q+ A + + + +
Sbjct: 182 TVSEHY---QGNEESLNTGFVEYEIGADARLEHYRFALQTGKAVSLGGSHFQLAERADLN 238
Query: 302 LVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHK 361
V G LSR +V + G + ++++F+LL + DLH+ + P G + +
Sbjct: 239 STLVGFGSDLSRVDVDMVHAGENAFAKMNAFYLLDGKELFDLHATVEHAVPHGTTEE-NI 297
Query: 362 CIVAHSLGQAVFDGNVKVNR 381
I+A +AVF+G + ++R
Sbjct: 298 RIIAADQAKAVFNGRIHIHR 317
>gi|456353823|dbj|BAM88268.1| SufD, needed for fhuF Fe-S center production/stability [Agromonas
oligotrophica S58]
Length = 441
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 136/336 (40%), Gaps = 21/336 (6%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQPI 113
L D + LP + +R ++ + P R+ E +R+TD T M ++ ++ +
Sbjct: 14 LADLYQGARRYLPGGEEITAVRAAAFDRFNTVGLPHRRVEAWRYTDLRTQMKEAKRLASL 73
Query: 114 ------TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
R + D+ A F L ++DG +L++L G+ + +
Sbjct: 74 PDDAAKARAREAKDLFAGAGFRKLAIVDGAFVPELSDLADLEPGLTIQPMADALAADKPL 133
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+S + D GV I V G + PI++ +++ N + +
Sbjct: 134 LSQRLGPVVPDDDPALALNTALAANGVVILVAPGTALSRPIHVAFVTT---NWVATSM-- 188
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
R V + G I+E G +G+D Y N+ +++V+G ++ H + ++ +A H
Sbjct: 189 -FTRSQVNIGAGASATIVESHQGPDGSD-YQVNTAMQLVVGDEARIDHIKVVSEGTSALH 246
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
I + + + GG L R+ + V G T ++ LL Q D +
Sbjct: 247 ISSLLANIGARATFNQLGFVAGGSLVRNQLFVHIAGEGTIADIRGGSLLSGTQHAD--TT 304
Query: 347 LLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVN 380
L ++H C R+ K +V S +AVF G + VN
Sbjct: 305 LAIEHAAENCQSRETFKAVVGDS-ARAVFQGKITVN 339
>gi|311746538|ref|ZP_07720323.1| FeS assembly protein SufD [Algoriphagus sp. PR1]
gi|126575438|gb|EAZ79770.1| FeS assembly protein SufD [Algoriphagus sp. PR1]
Length = 422
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 138/329 (41%), Gaps = 52/329 (15%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFT------DTSMIKSSQIQPITRPSSSLDVSTDAQF 128
++R+ + LS P+ K E ++FT + S+ + +P + + + F
Sbjct: 23 QVREEGKNSFLSQGLPTLKTEEYKFTAITKKLEQSISELKAAKPFAVSEDDVKAAIPSGF 82
Query: 129 PSLVLI--------DGFIQNSALNLSNLPDG--VYVGSLLGVSDGIMKRVSDFISEFQCG 178
VL+ D I L+ S L D +GS+ V
Sbjct: 83 DGTVLVFANGHLLEDQCINVEGLDFSKLSDKSETALGSIAKVEK---------------- 126
Query: 179 DLFWSINGMGAPDLGV-IYVPAGCKVENPIYLK--YLSVEGGNVDSKKLPISNPRVVVLV 235
D F ++N + D G+ I +P VE I L Y + EG + PRV +
Sbjct: 127 DPFVALN-QASFDQGIHISIPKKEIVEKAILLLSFYKANEG--------QVIQPRVWIEA 177
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
+ EV I + V + Y+ N V+E+ G ++R+ LQN+ NA + T
Sbjct: 178 GDFAEVSFISQSVNL-SDSSYFVNKVVEIKGGLNSQIRYYSLQNEGSNAIEVCNTETNLL 236
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PR 353
S + V +S G + R+N+++ LG ++E + +LL D H+ +DH P
Sbjct: 237 QDSRFSSVTISLSGDMVRNNLNLNLLGSNSEGNMYGIYLLNGKAHVDNHTN--VDHTIPH 294
Query: 354 GYCRQLHKCIVA-HSLGQAVFDGNVKVNR 381
+L+K I+A HS G VF+G + V +
Sbjct: 295 AESNELYKGILADHSRG--VFNGKIFVRQ 321
>gi|423333443|ref|ZP_17311224.1| FeS assembly protein SufD [Parabacteroides distasonis CL03T12C09]
gi|409228323|gb|EKN21215.1| FeS assembly protein SufD [Parabacteroides distasonis CL03T12C09]
Length = 450
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 142/320 (44%), Gaps = 24/320 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQF 128
+ LR + +PS + E +++TD + + I + P + DV
Sbjct: 29 MNALRADALANFERLGFPSTRSEDYKYTDVAQAFAPDYGLNINRVAIPVNPYDVFR-CDV 87
Query: 129 PSLVLIDGFIQNSA-----LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
P+L F+ N L ++LP+GVY G L ++ + S + + D
Sbjct: 88 PNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGGLKAFTEQYPEIASKYYGKAAPSSKDGI 147
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N M A D V+YVP VE PI L +++ +VD+ ++N RV+V++E E
Sbjct: 148 IALNTMLAQDGFVVYVPKNVVVERPIQL--VNIFRNDVDT----MANRRVLVIMEPHSEA 201
Query: 242 GIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
++ +D + A V+E+ +G + + L+ S++ VRQ ++
Sbjct: 202 KLL--VCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEESSVSTTRFSSVHVRQAASTNV 259
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ ++ L+R+N +V+ G E+ L +L +Q D +S + P +L
Sbjct: 260 LVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELF 319
Query: 361 KCIVA-HSLGQAVFDGNVKV 379
K ++ H++G VF G + V
Sbjct: 320 KNVLNDHAVG--VFSGRILV 337
>gi|78183985|ref|YP_376420.1| ABC transporter, membrane component [Synechococcus sp. CC9902]
gi|78168279|gb|ABB25376.1| ABC transporter, membrane component [Synechococcus sp. CC9902]
Length = 397
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 33/298 (11%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLP 149
P+RK E +R T+ S +++ P+ +++ D +++DG N L LP
Sbjct: 28 PTRKQEAWRLTNLSRLEAVARMPVNGVATASDAPPCLDGVVRLVLDGV--NDPLEGVTLP 85
Query: 150 DGVY------VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV 203
+G+ + LG + D++ EF N A L + V
Sbjct: 86 EGLTHLEPKELELALGHTLDRCGSSDDWLVEF---------NHASAQQLLALRVRGTVP- 135
Query: 204 ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLE 263
P+ + + G + RV+++VEE ++ +++ F G+ G + + ++E
Sbjct: 136 --PLEITMAAASG---------LIPTRVLLVVEEKAQLELLQVFSGR-GEAAH--SHLME 181
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 323
V +G+ + H L AA AV QE S Y V G L R V Q+
Sbjct: 182 VHLGQEAQFNHGVLACADGVAALFAQLAVEQEPRSTYNFTSVIQGWSLGRIEPRVVQVDG 241
Query: 324 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
T L + +Q +H+ + + P G QL KC+ A +F+G + V R
Sbjct: 242 QASTTLKGLAVADLEQQLAVHTSVCFEGPDGELDQLQKCLAA-GRSHTIFNGAINVPR 298
>gi|285017820|ref|YP_003375531.1| iron ABC transporter permease [Xanthomonas albilineans GPE PC73]
gi|283473038|emb|CBA15543.1| probable abc transporter-associated involved in fe-s cluster
assembly abc transporter protein [Xanthomonas
albilineans GPE PC73]
Length = 420
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 138/296 (46%), Gaps = 12/296 (4%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSN 147
P + E +++T ++ + P ++ ++ + A P+ LV ++G ++ LS
Sbjct: 31 PGPRSEAWKYTSLRALERRRFVPAADAAADVNAAVIASIPAPRLVFVNGRASDALSELSC 90
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENP 206
LP GV + L + G + F+ D +F +N A + V+ V AG +VE P
Sbjct: 91 LPCGVALQRLSALLRGGEDAMRFLGRRFERVDEVFARLNAALADEGCVLRVDAGVRVETP 150
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
++L ++S + L + R ++ + + + ++E + E + + +NS+ + +
Sbjct: 151 LHLVFVSTAA----AADLAWHH-RHLIELGQNASLSLVEHHLHLE-DAPHLSNSLAHIHL 204
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTE 326
G ++ H+ +Q + + + T + Y+ V++ GG L RH ++V+ G +
Sbjct: 205 AAGAQLMHARVQEDAPSITTLLRTDAVLAREAQYQRVDLELGGALVRHELNVRLEGDN-- 262
Query: 327 TELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
L++ +L+ + + L +RL ++H R +L +A + + F G + + +
Sbjct: 263 ARLTANGVLLGNGRRQLDTRLGIEHIARDTACELLWRGIATARSRVAFHGGIHIRQ 318
>gi|347535593|ref|YP_004843018.1| Fe-S assembly protein, SufD [Flavobacterium branchiophilum FL-15]
gi|345528751|emb|CCB68781.1| Fe-S assembly protein, SufD [Flavobacterium branchiophilum FL-15]
Length = 438
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 144/345 (41%), Gaps = 25/345 (7%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L E L S + + L LR S+ + + +P++K+E +++T + + +
Sbjct: 1 MELKEKLLASFMAFEERVDVQTELHDLRTSAIKNFENKGFPTKKEEAWKYTSLNALLKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ ++++ ++ +V IDG I +S L+ + DG+ V + S
Sbjct: 61 FSVFPKKENAIEFKDVKKYFLHEIDTYKIVFIDG-IFSSHLS-ATTHDGLDVCLM---SS 115
Query: 163 GIMKRVSDFISEFQCGDL------FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
+ K I + + S+N + + I +P VE PI + Y S
Sbjct: 116 ALTKPKYKMIIDTYFNQIASKEESLTSLNTAFSLEGAYINIPKSKVVEKPIEIIYFST-- 173
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
GN + + PR +V+V E V I+E N N+V E+ K V +
Sbjct: 174 GN---EAALMVQPRNLVIVGENAYVQIVERHQSLNSNPV-LTNAVTEIFAQKRAIVDYYK 229
Query: 277 LQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLV 336
+QN A+ I T + Q+ S + S GG ++R+N++ G ++ L ++
Sbjct: 230 VQNDLQTASLIDNTYIAQKQESHVAVHTFSFGGNITRNNLNFYHQGERIDSTLKGITIIG 289
Query: 337 SDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
Q D ++ + P Q +K I+ S VF+G + V +
Sbjct: 290 DKQHVDHYTLVQHATPNCESHQNYKTILNDS-ATGVFNGKIFVEK 333
>gi|290509068|ref|ZP_06548439.1| FeS assembly protein SufD [Klebsiella sp. 1_1_55]
gi|289778462|gb|EFD86459.1| FeS assembly protein SufD [Klebsiella sp. 1_1_55]
Length = 424
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 37/337 (10%)
Query: 60 LPSSSSSLPQPLPL------QKLRDSSS--QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS+ L Q L Q+ +++ Q LL P+RK E +++T + +
Sbjct: 4 LPNSSNVLQQWHHLFEAQGGQRTAEATQHLQQLLRLGLPTRKHEDWKYTPLDALLNGHFV 63
Query: 112 PITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
S S + P LV IDG L D + + D +
Sbjct: 64 ADEGASLSAEQRDALALPLDAWRLVFIDGRYH------PELSDDLAASGVEVSVDNQRQH 117
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
+ D + ++F + A + + VP +++ P+ L +++ + L +
Sbjct: 118 LPDALHP----EVFLHLTESLAQTVTRLRVPRNRRLDKPLLLMHITR---GLAGDALNTA 170
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ---SLNA 284
+ R + +E G E ++E ++ ++ L + + ++H L + S +
Sbjct: 171 HYRHHLALESGAEATVVEHYLSF-NEQPHFTGGRLTMTVADNAHLQHIKLAFENALSYHF 229
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
AH R +A + GG++ RH+ + G ++ L+S + V ++ D
Sbjct: 230 AHNDLLLGRDASAFSSSFL---LGGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCD-- 284
Query: 345 SRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
SR LDH GYC RQLHK IV+ G+AVF+G + V
Sbjct: 285 SRTWLDHQVGYCNSRQLHKTIVSDK-GRAVFNGLINV 320
>gi|402493160|ref|ZP_10839915.1| FeS assembly protein SufD [Aquimarina agarilytica ZC1]
Length = 437
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 147/344 (42%), Gaps = 24/344 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L E L S + +++ P+ +R + ++ + +P++K E +++T + + +
Sbjct: 1 MELKEKLVSSFLAFEANVDTTSPIHDIRIEALKSFEAYGFPTKKLEAWKYTSLNSVIKND 60
Query: 110 IQPITRPSSSLDVS-------TDAQFPSLVLIDGFIQNSALNLS--NLPDGVYVGSLLGV 160
+ +L+ +D +V IDG + +S L+ + + D + S L
Sbjct: 61 FSIFPKKEVALEFKDVKKYFISDLDSYKIVFIDG-VYSSHLSETTHDKIDVCLMSSAL-- 117
Query: 161 SDGIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS--VEGG 217
S K V D + + D ++N A + IY+P + PI + + S V+G
Sbjct: 118 SQNRFKPVIDVYYNTVAKEDGMTALNTAFAKEGAYIYIPKNTAADKPIQVIHFSTGVDGA 177
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
+ PR +++ E+ EV IIE + NSV E+ G + + +
Sbjct: 178 -------AMLQPRNLIVCEDNSEVTIIERHQNLSDKKVF-TNSVTEMYTGNNAHIDYYKI 229
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
QN + ++ + T Q + S + + GG+++R+N++ Q G ++ L+ +L
Sbjct: 230 QNDTDASSLVDNTFTEQHSNSVCSVHTFAFGGEITRNNLNFYQKGQGIDSILNGVTILEG 289
Query: 338 DQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D ++ + P Q +K I VF+G + V +
Sbjct: 290 KTHVDHNTLVEHQEPNCESHQDYKGIFDEK-STGVFNGKIIVEQ 332
>gi|213965595|ref|ZP_03393789.1| FeS assembly protein SufB [Corynebacterium amycolatum SK46]
gi|213951754|gb|EEB63142.1| FeS assembly protein SufB [Corynebacterium amycolatum SK46]
Length = 488
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 209 IYVPKGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKS 261
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 262 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKCEEGATMEWIDGNIGSKVTMK 321
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S + Q QD ++++ P + K VA + G+A +
Sbjct: 322 YPAVWMTGPHAKGEVLSVAMAGEGQFQDTGAKMVHMAPHTSSNIVSKS-VARNGGRAAYR 380
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 381 GLVQVNK 387
>gi|408787050|ref|ZP_11198783.1| iron-sulfur cluster assembly protein [Rhizobium lupini HPC(L)]
gi|408487003|gb|EKJ95324.1| iron-sulfur cluster assembly protein [Rhizobium lupini HPC(L)]
Length = 423
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPI 113
+L D+ + S LP + RD L + P+R+ E + +TD S++++ P
Sbjct: 15 ALVDAYTAKFSELPGDGAVVAARDVLFDDLKTGGLPTRRIEAWHYTDLKSLLRTV---PE 71
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFI 172
RP+ ++ +T S V ++ + ++ + DGV V +D ++ + +
Sbjct: 72 DRPAPVIEKATSVVAGSSV---AYVLHGTADIGKV-DGVSVSRF---ADSLLDGSAAAGL 124
Query: 173 SEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
+E D ING D V+ +PA +++ PI L+ ++ G + P+ +
Sbjct: 125 AEASKDDTIGRINGSFVRDGLVVEIPADAELDKPIELQ--AIHGAGQVHSRFPVRFGK-- 180
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
G + +IE + +D +SV ++V+ G + LQ Q H+ +
Sbjct: 181 -----GSKATVIERHLSVT-SDAALVSSVSDIVVEDGAEATWILLQQQGAADIHLGQLRI 234
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
+ + + L ++ GGKL R + + G T+ + +LL + D+ L + P
Sbjct: 235 KLGAEAKFRLFLINAGGKLVRQELRIDVEGEGTDLIVRGVNLLGGETHTDVTMVLGHNVP 294
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGNVKV 379
++ + +V + +F G ++V
Sbjct: 295 NTTSTEVFRNVV-FDRAKGIFQGMIRV 320
>gi|339478052|ref|YP_004706872.1| FeS assembly protein SufD [Candidatus Moranella endobia PCIT]
gi|338172603|gb|AEI75004.1| FeS assembly protein SufD [Candidatus Moranella endobia PCIT]
Length = 437
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F + + + I +PAG + P+YL +LS G+ D L + R + V
Sbjct: 137 DMFLHLTESLSQETTNIRLPAGMVAQRPLYLLHLS--QGSDDQANLSTVHYRHHLEVGAN 194
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
+ +IE FV + +++ + + + + + H L +S + H + + A+
Sbjct: 195 SQCQVIEHFVSINAHG-HFSGARMSMAVDANAHLSHIKLAFESRASYHFGHNDISVDRAA 253
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC-- 356
G L+RH Q G ++S L + D +R L+H +G+C
Sbjct: 254 VVRSSTFILGAGLTRHQTSAQLNGEGANIAINSLLLPSAADISD--TRTYLEHNQGHCFS 311
Query: 357 RQLHKCIVAHSLGQAVFDGNVKVNR 381
RQLHK ++A G+ V +G +KV +
Sbjct: 312 RQLHK-VIARDHGKGVCNGLIKVAK 335
>gi|381395172|ref|ZP_09920878.1| Fe-S cluster assembly protein SufD [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379329271|dbj|GAB56011.1| Fe-S cluster assembly protein SufD [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 419
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 126/311 (40%), Gaps = 15/311 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP-SL 131
L +R + L + WP + E +R T + IK ++ + + + P L
Sbjct: 19 LAPMRQQALSKLQTQGWPHARSEEWRLTPLTSIKERTVEASSVAVNYIVPQIKGLNPIDL 78
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAP 190
V +DG + + LN LP G+ V +L +++ + +F +N
Sbjct: 79 VFVDGVLVTN-LNDIRLPTGLSVHALSDAPSAAQTKITALFGHVKPTRHVFGLVNDAICQ 137
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
I V C ++ P+ + L+ + + ++ R +V + + ++ +IE
Sbjct: 138 QGIYIEVDENCSIDTPLRIVNLATKDCD--------AHTRALVNLGKNSQLKVIEH---G 186
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
G+ + + E IG+ ++ H + A + + + + V+ G +
Sbjct: 187 SGSAASFTTAFAEYAIGQEARLEHYRFAFFTGAAKQVGGSHFSLQDKANLNSTLVAYGSE 246
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQ 370
LSR +V + G ++++ +LL + DLHS + P G + + I+ +
Sbjct: 247 LSRLDVDIIHAGEHANAKMNAIYLLAEGEFFDLHSTIEHAMPNGTTEENARGIIGDR-AR 305
Query: 371 AVFDGNVKVNR 381
AVF G + ++R
Sbjct: 306 AVFSGRIHIHR 316
>gi|312172293|emb|CBX80550.1| FeS assembly protein SufD [Erwinia amylovora ATCC BAA-2158]
Length = 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 134/311 (43%), Gaps = 32/311 (10%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSS---LDVSTDAQFPSLVLID 135
Q LL T P+RK E +++T + ++Q +P + + L + DA LV ID
Sbjct: 35 QQLLRTGLPTRKQEDWKYTPLDQLLNNQFVMPEPAALDAEAIKALALPIDA--VRLVFID 92
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G L D + + ++ +R +SE ++F + A + +
Sbjct: 93 GRFS------PELSDSEHDLFTIRIAQSPERRE---LSEPVHPEVFLHLTESLAEQVTFM 143
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+ G P+YL L + G+ + +L S+ R + ++E E +IE ++ +
Sbjct: 144 QLARGKAAARPLYL--LHISSGST-AGELNTSHYRHHLQLDEAAEATVIEHYLSLDAAP- 199
Query: 256 YWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLS 312
++ + +G + H ++ S + +H T R + + G L+
Sbjct: 200 HFTGARFTAEVGNNAALTHYNLAFEDRSSYHLSHNDLTLGRDTRVQSHSFL---LGAGLT 256
Query: 313 RHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQ 370
RH+ + G + ++S L + + D SR L+H +GYC RQLHK IV +
Sbjct: 257 RHHTSTRLDGEGSFLAINSLMLPMDKEVCD--SRTWLEHNKGYCQSRQLHKTIV-RDRAR 313
Query: 371 AVFDGNVKVNR 381
AVF+G +KV +
Sbjct: 314 AVFNGIIKVAK 324
>gi|225021395|ref|ZP_03710587.1| hypothetical protein CORMATOL_01414 [Corynebacterium matruchotii
ATCC 33806]
gi|305681437|ref|ZP_07404244.1| FeS assembly protein SufB [Corynebacterium matruchotii ATCC 14266]
gi|224945777|gb|EEG26986.1| hypothetical protein CORMATOL_01414 [Corynebacterium matruchotii
ATCC 33806]
gi|305659642|gb|EFM49142.1| FeS assembly protein SufB [Corynebacterium matruchotii ATCC 14266]
Length = 472
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G VE P+ Y + N+ + R +++V+E V +E
Sbjct: 193 VYVPKGVHVEIPL-QAYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKT 245
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K+S
Sbjct: 246 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKCEEGATMEWVDGNIGSKVSMK 305
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S Q QD ++++ P + K VA G+A +
Sbjct: 306 YPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVHMAPHTSSNIVSKS-VARGGGRAAYR 364
Query: 375 GNVKVN 380
G V++N
Sbjct: 365 GLVRIN 370
>gi|421724233|ref|ZP_16163466.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
oxytoca M5al]
gi|410374989|gb|EKP29637.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
oxytoca M5al]
Length = 424
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 143/338 (42%), Gaps = 39/338 (11%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS-----------QTLLSTPWPSRKDEPFRFTDTSMIKSS 108
LP+SS++L Q L +S S Q LL P+RK+E +++T + +
Sbjct: 4 LPNSSNALQQ---WHHLFESQSGQRSPQAHQHLQQLLRLGLPTRKNENWKYTPLDALLN- 59
Query: 109 QIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
Q +P + DAQ + LV +DG +S L D + D
Sbjct: 60 QTFVAAQPQALTAAQRDAQALTVEAWRLVFVDGQFSDS------LSDDLAASGYEVQVDN 113
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ + D + ++F + A + I V + + P+ + +L+ + S +
Sbjct: 114 ERQHLPDAVQP----EVFLHLTESLATTVTHIRVRRNQRPQKPLLIMHLT---RGLASDE 166
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ ++ R + +E G + IIE ++ + ++ + L + + ++H L ++
Sbjct: 167 MNTAHYRHHLELESGAQATIIEHYLSL-NDQRHFTGARLTMTVADNAHLQHIKLAFENAQ 225
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
+ H + S G + RH+ + G ++ ++S + V+ + D
Sbjct: 226 SYHFAHNDLALGRDSSAFSSSFLLGSAVLRHHTSTRLNGENSNLRINSLAMPVNGEVCD- 284
Query: 344 HSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
SR LDH GYC RQLHK IV + G+AVF+G + V
Sbjct: 285 -SRTWLDHKVGYCNSRQLHKTIV-NDKGRAVFNGLINV 320
>gi|417373682|ref|ZP_12143648.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|353601823|gb|EHC57352.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
Length = 423
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 144/343 (41%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQ HK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQSHKTIVSDK-GRAVFNGLINV 319
>gi|282881111|ref|ZP_06289798.1| FeS assembly protein SufD [Prevotella timonensis CRIS 5C-B1]
gi|281304915|gb|EFA96988.1| FeS assembly protein SufD [Prevotella timonensis CRIS 5C-B1]
Length = 447
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 142/324 (43%), Gaps = 28/324 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVS 123
+ +R+ + + +PSRK E +R+TD + + ++++ P ++ DV
Sbjct: 26 MNHVREQAFKDFKQQGFPSRKIERYRYTDINALFEPNYGLNLNRLEIPVDPYAAFKCDVP 85
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF---ISEFQCGDL 180
+ V+ D F AL LPDGV V SL S + V+ + I++ Q D
Sbjct: 86 NLSTSLYFVVNDAFY-TKALPKVGLPDGVKVLSLREASMEMPDLVAKYYGQIAKTQ-EDA 143
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M A D IYV G +++ + + +++ +VD + N RV++++EEG +
Sbjct: 144 LTALNAMLAQDGLFIYVSKGVQMDRAV--QVINLLRSDVD----LMVNRRVLIVMEEGAQ 197
Query: 241 VGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ F +D + A V+E +G+ + ++ I V Q+ S
Sbjct: 198 AKFL--FCDHTIDDHRFLATQVIEAYVGENASLDLYCMEETHERNTRISNVYVEQQANSR 255
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--R 357
+ ++ ++R+ + + G E + +++D+ Q + + +DH +C R
Sbjct: 256 FNHNVLTLHNGITRNQLQLVFRGEGAECVCNG--CVIADKQQHIDNNTFIDHAVPHCVSR 313
Query: 358 QLHKCIVAHSLGQAVFDGNVKVNR 381
+L+K V F G V V +
Sbjct: 314 ELYK-YVLDDQATGAFAGRVLVEK 336
>gi|269837553|ref|YP_003319781.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
gi|269786816|gb|ACZ38959.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
Length = 443
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 136/338 (40%), Gaps = 37/338 (10%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS 123
SS +P +++ R ++ + + P P+R DE +R TD + + P P+ +D S
Sbjct: 20 SSLRGEPDWVREKRLAAWEAYEAIPMPTRTDEEWRCTDIRRLPIGDVAPYATPNGRVD-S 78
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV---SDGIM--------KRVSDFI 172
A P + + G + A L+ D V S L G++ ++ D +
Sbjct: 79 VAALQPEVAAVLGDEERRA-GLTVQVDSSSVFSELSADLAEQGVIFCDLATAIEKYPDLV 137
Query: 173 SEFQCGDL-------FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+ + F +++G +YVPAG +VE P++ + + G V
Sbjct: 138 KQHFMTEAVPVDDNKFAALHGAFWSGGTFVYVPAGVQVEVPLWAQVYAHAGVGV------ 191
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
P +V+ E+G V +I+ + + ++ A V+E++ + +VR+ LQ+ N
Sbjct: 192 --FPHTLVVAEQGASVVVIDAWNSETSDEPTIAAGVVEIIAREEAQVRYIQLQDWGRNV- 248
Query: 286 HIKWTAVRQETASGYELV----EVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
W V Q + + V V G KLS+ + +G E+ + Q
Sbjct: 249 ---WNFVTQRSLIAQDAVVNSLNVGLGSKLSKSFIAGHLVGAGALAEMLGLYFADETQHL 305
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
D +R P L K + + V+ G +KV
Sbjct: 306 DFQTRQWHISPYAQSDLLFKGAI-KDRARTVYSGIIKV 342
>gi|148240484|ref|YP_001225871.1| SufD protein, Fe-S cluster assembly [Synechococcus sp. WH 7803]
gi|147849023|emb|CAK24574.1| SufD protein, Fe-S cluster assembly [Synechococcus sp. WH 7803]
Length = 398
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
V+EV +G+ ++RH L + S +++ + AV QE S Y+ V V G + R V Q
Sbjct: 179 VIEVHLGQEARLRHGVLASASDDSSLLAHLAVEQEPRSSYDFVSVCRGWRFGRLEPRVLQ 238
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
+ T L+ + +D+ H+ + + P G QL K + A ++F+G ++V
Sbjct: 239 VDGQATTRLTGLAMTGTDEQFATHTSVCFEGPEGSLDQLQKAVAADR-SHSIFNGAIQVP 297
Query: 381 R 381
R
Sbjct: 298 R 298
>gi|262202310|ref|YP_003273518.1| FeS assembly protein SufB [Gordonia bronchialis DSM 43247]
gi|262085657|gb|ACY21625.1| FeS assembly protein SufB [Gordonia bronchialis DSM 43247]
Length = 485
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 206 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 258
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+V+ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 259 DSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 318
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 319 YPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAPNTSSNIVSKS-VARGGGRASYR 377
Query: 375 GNVKVN 380
G +KVN
Sbjct: 378 GLIKVN 383
>gi|39935532|ref|NP_947808.1| FeS assembly protein SufD [Rhodopseudomonas palustris CGA009]
gi|39649385|emb|CAE27907.1| sufD, needed for fhuF Fe-S center production/stability
[Rhodopseudomonas palustris CGA009]
Length = 437
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 135/341 (39%), Gaps = 29/341 (8%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
++ D+ + S+ +P + R + T P R+ E +++TD + +
Sbjct: 12 DTASDNFAAVSARVPGAGKVADTRRQALDTFQRIGLPHRRIEDWKYTDLRALMREVLPLA 71
Query: 114 TRPSSSLDVSTDAQFP--------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
P ++ +A LVL+DG + L+ L G+ + SL +
Sbjct: 72 AAPEAAALAQAEAAAKLHAIDGVRRLVLVDGVLAPGLSELAGLEAGLSIRSLREA----L 127
Query: 166 KRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG---NVDSK 222
+ D + D ++N D VI V G + P+++ +++ G
Sbjct: 128 QSGDDRVLSLDTADPMVALNTALMTDGLVIEVADGTTLARPLHILHIASGGAPAAMFTRS 187
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
++ + N V ++E +V EG Y + + IG ++ + + S
Sbjct: 188 RISLGNAAVAT---------VVESYVAGEGAAAYQVHDSAVITIGDHARLDYVRIVEDSR 238
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
A +I V + + ++TGG +SR+ V G +E E + +LL Q D
Sbjct: 239 EAFNITSATVAVGAHAHFNAFGITTGGLVSRYQAVVTVAGSHSEVETNGVNLLNGKQHAD 298
Query: 343 LHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
+ L+++H +C R+ + +V G +VF G + V +
Sbjct: 299 --TTLVMNHDVPHCVSREGFRAVV-DDRGHSVFQGRINVRQ 336
>gi|429730422|ref|ZP_19265069.1| FeS assembly protein SufB [Corynebacterium durum F0235]
gi|429147578|gb|EKX90602.1| FeS assembly protein SufB [Corynebacterium durum F0235]
Length = 477
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 198 VYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKS 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 251 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKCEEGATMEWVDGNIGSKVTMK 310
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S Q QD ++++ P + K VA S G+A +
Sbjct: 311 YPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVHMAPYTSSNIVSKS-VARSGGRAAYR 369
Query: 375 GNVKVNR 381
G V++N+
Sbjct: 370 GLVQINK 376
>gi|375255387|ref|YP_005014554.1| FeS assembly protein SufD [Tannerella forsythia ATCC 43037]
gi|363406529|gb|AEW20215.1| FeS assembly protein SufD [Tannerella forsythia ATCC 43037]
Length = 458
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 129/326 (39%), Gaps = 28/326 (8%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDV 122
P + LR + T +PS E +R+TD + + +++ T PS
Sbjct: 34 PAFMNALRTQALADFERTGFPSPLHEDYRYTDVAKAFAPDYGLNLTRLHVPTNPSDVFRC 93
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGVSDGIMKRVSDFISEFQ- 176
SL F+ N +L LP + VY G + ++ + S + +
Sbjct: 94 DVPNMSTSLY----FVVNDSLYTDTLPKTSLSEEVYAGGMHAFAELHPEIASRYYGKAAD 149
Query: 177 -CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
D ++N M A D V+YVP G VE P+ L +++ VD ++N RV++++
Sbjct: 150 TSADAVSALNTMLAQDGFVLYVPRGVHVERPVQL--INIFRSTVD----LMANRRVLIII 203
Query: 236 EEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E ++ +D + A V+E+ +G + L+ S + V Q
Sbjct: 204 EPHASARLL--VCDHSMDDVKFLATQVVEIFAEEGAFFDYYDLEESSASTTRFSSLYVEQ 261
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 354
+S + ++ L+R+N ++ G E L + DQ D ++ + P
Sbjct: 262 AASSNVLVNGITLNNGLTRNNYRIRLNGEGAEATLCGMAIEDRDQQVDTYTHITHVVPHC 321
Query: 355 YCRQLHKCIVAHSLGQAVFDGNVKVN 380
+L K ++ VF G + VN
Sbjct: 322 TSNELFKNVLDER-AVGVFSGRIFVN 346
>gi|54025530|ref|YP_119772.1| hypothetical protein nfa35600 [Nocardia farcinica IFM 10152]
gi|54017038|dbj|BAD58408.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 485
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 206 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 258
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 259 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 318
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD +++L P + K VA G+A +
Sbjct: 319 YPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIVSKS-VARGGGRASYR 377
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 378 GLVQVNK 384
>gi|384106090|ref|ZP_10007000.1| FeS assembly protein [Rhodococcus imtechensis RKJ300]
gi|432336665|ref|ZP_19588152.1| FeS assembly protein [Rhodococcus wratislaviensis IFP 2016]
gi|383834281|gb|EID73723.1| FeS assembly protein [Rhodococcus imtechensis RKJ300]
gi|430776418|gb|ELB91854.1| FeS assembly protein [Rhodococcus wratislaviensis IFP 2016]
Length = 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG R++ +QN S N ++ + E E ++ + G K++
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTKRTKVEAGGSMEWIDGNIGSKVTMK 319
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G E+ S Q QD +++L P + K VA G+A +
Sbjct: 320 YPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIISKS-VARGGGRASYR 378
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 379 GLVQVNK 385
>gi|390565474|ref|ZP_10246130.1| FeS assembly protein SufD [Nitrolancetus hollandicus Lb]
gi|390171290|emb|CCF85465.1| FeS assembly protein SufD [Nitrolancetus hollandicus Lb]
Length = 449
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 135/338 (39%), Gaps = 46/338 (13%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF 128
+P +++ R ++ + P PSR DE +R TD + + P T + V++ A+
Sbjct: 30 EPEWVREKRLAAWDAFEAIPMPSRTDEEWRRTDIRRLPIDAVAPYTGIAGK--VNSVAEL 87
Query: 129 PS---------------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG---------I 164
P+ V +D + LN GV L D +
Sbjct: 88 PADVTAALAEDERRSGLTVQVDSNSVYADLNADLAGQGVIFTDLATAIDQHPDLVKQYFM 147
Query: 165 MKRVSDFISEFQC-GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ V + S+F FWS +YVPA VE P++ V G ++ S
Sbjct: 148 TRAVPNEDSKFAALHGAFWSGGTF-------VYVPANTHVEIPLHAH---VYGQSLGSSI 197
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
LP ++++ EEG V +++ + G D A+ V+E+ + +VR Y+Q Q
Sbjct: 198 LP----HMLIVAEEGASVVVVDSWASPTGTDPLLASGVVEIFAKEASQVR--YIQVQDWG 251
Query: 284 AAHIKWTAVRQETASG--YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
+ +T R + ++ VS G +LSR+ + +G + E+ + Q
Sbjct: 252 RSAWNFTTQRAVISQDAVVNMLNVSLGSRLSRNLIASDLIGAGSAAEMLGLYFADERQHL 311
Query: 342 DLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
D +R + P L+K + + V+ G +KV
Sbjct: 312 DNQTRQMHIAPYATSDLLYKGAI-KDRARTVYLGVIKV 348
>gi|118472504|ref|YP_887437.1| FeS assembly protein SufB [Mycobacterium smegmatis str. MC2 155]
gi|399987453|ref|YP_006567802.1| FeS assembly protein SufB [Mycobacterium smegmatis str. MC2 155]
gi|441208775|ref|ZP_20973993.1| feS assembly protein SufB [Mycobacterium smegmatis MKD8]
gi|118173791|gb|ABK74687.1| FeS assembly protein SufB [Mycobacterium smegmatis str. MC2 155]
gi|399232014|gb|AFP39507.1| FeS assembly protein SufB [Mycobacterium smegmatis str. MC2 155]
gi|440627494|gb|ELQ89308.1| feS assembly protein SufB [Mycobacterium smegmatis MKD8]
Length = 477
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 198 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ GG+ R++ +QN S N ++ R E + E ++ + G K++
Sbjct: 251 DSLHSAVVEIIVKAGGRCRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMK 310
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD +++L P + K VA G+A +
Sbjct: 311 YPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPNTSSNIVSKS-VARGGGRASYR 369
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 370 GLVQVNK 376
>gi|419962295|ref|ZP_14478288.1| iron-sulfur cluster assembly protein SufB [Rhodococcus opacus M213]
gi|414572242|gb|EKT82942.1| iron-sulfur cluster assembly protein SufB [Rhodococcus opacus M213]
Length = 486
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG R++ +QN S N ++ + E E ++ + G K++
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTKRTKVEAGGSMEWIDGNIGSKVTMK 319
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G E+ S Q QD +++L P + K VA G+A +
Sbjct: 320 YPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIISKS-VARGGGRASYR 378
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 379 GLVQVNK 385
>gi|425072377|ref|ZP_18475483.1| FeS assembly protein SufD [Proteus mirabilis WGLW4]
gi|404597592|gb|EKA98089.1| FeS assembly protein SufD [Proteus mirabilis WGLW4]
Length = 435
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I + G + P+Y+ L++ G+ +++ +N R + V ++ +IE ++ +G +
Sbjct: 153 ITLKKGVVADKPLYI--LNITQGHA-GQEVNSANYRFHLDVGANAQMQVIEHYISSDGEN 209
Query: 255 CYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L IG H + + S + AH + R + Y + G KL
Sbjct: 210 RHFTGARLTATIGDNASFNHIKLGFENDISQHFAHNDLSIGRDARVNSYAFL---LGNKL 266
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
SRH+ G ++E ++S L +++ D +R L H C RQLHK I A G
Sbjct: 267 SRHHTSAALTGENSELSMNSVVLPKANEIAD--TRTWLVHGEKNCLSRQLHKSI-AMDAG 323
Query: 370 QAVFDGNVKV 379
+AVF+G + V
Sbjct: 324 KAVFNGMITV 333
>gi|421883430|ref|ZP_16314663.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|379987070|emb|CCF86936.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
Length = 388
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 42/311 (13%)
Query: 84 LLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRPSSS----LDVSTDAQFPSLVLIDG-F 137
+L P+RK E +++T + SQ IQ S++ L + DA LV +DG F
Sbjct: 1 MLRLGLPTRKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALALQIDA--VRLVFVDGRF 58
Query: 138 I-------QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
+ QNS ++S V D + E +F + A
Sbjct: 59 MPELSDSTQNSGFDVS-------------VRDERQTLAAPVHPE-----VFLHLTESLAQ 100
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ I V + P+ L +++ VD +L ++ R + + EG E +IE +V
Sbjct: 101 CVTYIQVRRNQRPTRPLLLMHIT---QGVDGDELNTAHYRHHLALAEGAEATVIEHYVSL 157
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGK 310
++ + L + + ++RH L ++ ++ H + T + G
Sbjct: 158 TAAK-HFTGARLTMNVADNAQLRHIKLAFENASSYHFAHNDLLLATDASAFSHSFLLGAA 216
Query: 311 LSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSL 368
+ RH+ Q G + L+S + V ++ D +R L+H +GYC RQLHK IV+
Sbjct: 217 VLRHHSSSQLNGENATLRLNSLAMPVKNEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK- 273
Query: 369 GQAVFDGNVKV 379
G+AVF+G + V
Sbjct: 274 GRAVFNGLINV 284
>gi|373460673|ref|ZP_09552424.1| FeS assembly protein SufD [Prevotella maculosa OT 289]
gi|371955291|gb|EHO73095.1| FeS assembly protein SufD [Prevotella maculosa OT 289]
Length = 447
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 131/297 (44%), Gaps = 25/297 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-------SQIQPITRPSSSL--DVS 123
L +RD + + +P+RK E +++TD + + ++++ P + DV
Sbjct: 26 LNAVRDRAFADFKAQGFPTRKVERYKYTDIPALFAPDYGLNLNRLEIPLNPYDTFKCDVP 85
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISEFQCGDL 180
+ V+ D F N L + LP+GV V SL V+ G++ I++ + D
Sbjct: 86 NLSTSLYFVVNDSFY-NKMLPQAGLPEGVIVDSLGHVATQKPGLIAEYYARIADTR-EDA 143
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M A D +YVP K++ I + +++ +VD + N RV++++E+G E
Sbjct: 144 ITALNTMFAQDGLFVYVPKHVKIDRAI--QVINILRADVD----LMVNRRVLIVMEQGAE 197
Query: 241 VGIIEEFVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASG 299
+ F N + + V+E + + + + L+ L + + Q+ S
Sbjct: 198 AKFL--FCDHAADNRKFLSTQVIEAYVAENASLELNCLEETHLKNTRLSNVYIEQQANSR 255
Query: 300 YELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
++ ++R+ + + G E + +V+D+ Q + + L+DH +C
Sbjct: 256 VNHNVITLHNGVTRNRLDLVLKGEGAECHCNG--CVVADKEQHVDNNTLIDHQAPHC 310
>gi|226366393|ref|YP_002784176.1| iron-sulfur cluster assembly protein SufB [Rhodococcus opacus B4]
gi|226244883|dbj|BAH55231.1| putative iron-sulfur cluster assembly protein SufB [Rhodococcus
opacus B4]
Length = 486
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG R++ +QN S N ++ + E E ++ + G K++
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTKRTKVEAGGSMEWIDGNIGSKVTMK 319
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G E+ S Q QD +++L P + K VA G+A +
Sbjct: 320 YPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIISKS-VARGGGRASYR 378
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 379 GLVQVNK 385
>gi|444431871|ref|ZP_21227032.1| iron-sulfur cluster assembly protein SufB [Gordonia soli NBRC
108243]
gi|443887270|dbj|GAC68753.1| iron-sulfur cluster assembly protein SufB [Gordonia soli NBRC
108243]
Length = 487
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 208 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 260
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+V+ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 261 DSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 320
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 321 YPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAPNTSSNIVSKS-VARGGGRASYR 379
Query: 375 GNVKVN 380
G +K+N
Sbjct: 380 GLIKIN 385
>gi|377570782|ref|ZP_09799915.1| iron-sulfur cluster assembly protein SufB [Gordonia terrae NBRC
100016]
gi|377532003|dbj|GAB45080.1| iron-sulfur cluster assembly protein SufB [Gordonia terrae NBRC
100016]
Length = 482
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 203 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 255
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 256 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWVDGNIGSKVTMK 315
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 316 YPAVWLTGEHAKGEVLSVAFAGPGQHQDTGSKMVHLAPNTSSNIVSKS-VARGGGRASYR 374
Query: 375 GNVKVN 380
G +K+N
Sbjct: 375 GLIKIN 380
>gi|433607986|ref|YP_007040355.1| FeS assembly protein SufB [Saccharothrix espanaensis DSM 44229]
gi|407885839|emb|CCH33482.1| FeS assembly protein SufB [Saccharothrix espanaensis DSM 44229]
Length = 481
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G VE P+ Y + N+ + R +++V+EG V +E +
Sbjct: 202 IYVPKGVHVEIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYSS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+V+ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 255 DSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEEGATMEWIDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G + E+ S Q QD ++++ P + K VA G+ +
Sbjct: 315 YPAVFLMGEHAKGEVLSIAFAGEGQHQDAGAKMVHMAPHTSSTIVSKS-VARGGGRTSYR 373
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 374 GLVQVNK 380
>gi|379709622|ref|YP_005264827.1| putative component of SufBCD complex [Nocardia cyriacigeorgica
GUH-2]
gi|374847121|emb|CCF64191.1| putative component of SufBCD complex [Nocardia cyriacigeorgica
GUH-2]
Length = 478
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 199 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 251
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 252 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 311
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD +++L P + K VA G+A +
Sbjct: 312 YPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIVSKS-VARGGGRASYR 370
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 371 GLVQVNK 377
>gi|283782289|ref|YP_003373044.1| FeS assembly protein SufD [Pirellula staleyi DSM 6068]
gi|283440742|gb|ADB19184.1| FeS assembly protein SufD [Pirellula staleyi DSM 6068]
Length = 443
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 127/343 (37%), Gaps = 36/343 (10%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
+ S + +S +P L LR + WP+R E + TD + K Q Q P
Sbjct: 18 QRSFEAFLASRNEPAWLVDLRRRWWDVFQTQSWPARNSEEWIRTDIRLFKPDQYQL---P 74
Query: 117 SSSLDVSTDAQ---------FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
SL+ + Q S +D S L+ GV GSL D ++
Sbjct: 75 IGSLEAAETTQPLLNVGVQLAGSTSAVDSRPVKSILDPKWAAKGVVFGSL----DQLVHT 130
Query: 168 VSDFISEFQ-------CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
D I + D F S++ +YVP G ++ P+++ GG
Sbjct: 131 HGDLIRRYLFTEAMNPAYDRFASLHAACWSGGQFLYVPRGVVIDEPVHMLSALHHGG--- 187
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+V++EEG E ++ E D EV+ ++R LQN
Sbjct: 188 -----CDMGHTLVVLEEGAEATVLSETASHGEKDAGMHCGATEVIQRANSRLRLVSLQNW 242
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
L H + + + G +L++ N HV+ G E++++ +L S+
Sbjct: 243 GLGVWHFAHQKAVLGRDASLQWTIAAIGSRLAKVNQHVELAGIGAESQVNG--VLFSEDK 300
Query: 341 QDLHSRLLLDHPRGYCRQ--LHKCIVAHSLGQAVFDGNVKVNR 381
Q L L H C L+K + + V+ G +KV++
Sbjct: 301 QHLSYHTLQHHKAPQCISDFLYKSAL-QDKSRTVWRGMIKVDK 342
>gi|28198599|ref|NP_778913.1| ABC transporter membrane protein [Xylella fastidiosa Temecula1]
gi|182681282|ref|YP_001829442.1| FeS assembly protein SufD [Xylella fastidiosa M23]
gi|386084786|ref|YP_006001068.1| FeS assembly protein SufD [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|417558287|ref|ZP_12209269.1| membrane component protein [Xylella fastidiosa EB92.1]
gi|28056683|gb|AAO28562.1| ABC transporter membrane protein [Xylella fastidiosa Temecula1]
gi|182631392|gb|ACB92168.1| FeS assembly protein SufD [Xylella fastidiosa M23]
gi|307579733|gb|ADN63702.1| FeS assembly protein SufD [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338179091|gb|EGO82055.1| membrane component protein [Xylella fastidiosa EB92.1]
Length = 422
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 136/313 (43%), Gaps = 19/313 (6%)
Query: 74 QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--L 131
Q L D+ L P + E +++T ++ ++++D + P+ L
Sbjct: 22 QALEDARRDGL-----PDLRSETWKYTSLRTLERRHFTQAPTAATAIDPTWLNTIPTPRL 76
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
V ++G + NLS LP G+ + L K + F+ D F +N A
Sbjct: 77 VFVNGRHNPNLSNLSGLPQGMTLHPLSAPPREQDKGLHRSPPHFKHRDETFARLNTALAD 136
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V V PI+L +++ G +D ++ + + G + +IE +
Sbjct: 137 EGVLLRVHQNITVNTPIHLIFIT-PAGEIDHAWHLLNQ----IELHRGASLQLIEHQL-H 190
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL-NAAHIKWTAVRQETASGYELVEVSTGG 309
G+ + N + + I G + H+ LQN + + ++ AV + A Y V+V G
Sbjct: 191 TGHAAHLNNVLTRIHIAPGACLEHARLQNDATATTSFLRTDAVLAQDAE-YRRVDVELGA 249
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH-PRGYCRQLHKCIVAHSL 368
KLSRH ++V+ G + L++ +L+ T+ L +RL ++H R +L +
Sbjct: 250 KLSRHELNVRLEGDN--ARLTANGILLGHLTRHLDTRLHIEHIARNTASELLWRGIGTDR 307
Query: 369 GQAVFDGNVKVNR 381
+ VF G + +++
Sbjct: 308 SRVVFHGGIHIHQ 320
>gi|365900638|ref|ZP_09438503.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
gi|365418611|emb|CCE11045.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
Length = 441
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 145/339 (42%), Gaps = 27/339 (7%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT--SMIKSSQIQPI 113
L D ++ LP + +R ++ + P R+ E +++TD M ++ ++ +
Sbjct: 14 LADLYQTARKFLPGGDEVSAVRSAAFDRFNAVGLPHRRIEAWKYTDLRGQMKEAKRLASL 73
Query: 114 ------TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--SDG-- 163
+ + D+ A F L+++DG +L+NL G+ + ++ SD
Sbjct: 74 PDDAAKAKAREAQDLFAGAGFRRLMIVDGAFVTELSDLANLEPGLTIHAMADALASDQPL 133
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ +R+ + E D +N A + VI V G + PI++ +++ N +
Sbjct: 134 LSQRLGAVVPE---DDPALVLNTALAGNGVVICVAPGTALARPIHVAFVTT---NWVATS 187
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ R +V + G IIE G + +D Y N+ +++V+G ++ H + +
Sbjct: 188 M---FTRSLVNIGGGASATIIETHQGPDRSD-YQVNTAMQLVVGDEARIDHIKVTREGDG 243
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
A H+ + + + GG + R+ + ++ G T ++ LL Q D
Sbjct: 244 ALHVASLLANVGARASFNQLGFVLGGAVVRNQLFLRLAGEGTVADIKGASLLKGAQHAD- 302
Query: 344 HSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVN 380
+ L ++H C R+ K +V + +AVF G + V+
Sbjct: 303 -ATLSIEHAAAECQSRETFKAVVDDT-ARAVFQGKITVS 339
>gi|432680258|ref|ZP_19915635.1| FeS cluster assembly protein sufD [Escherichia coli KTE143]
gi|431221188|gb|ELF18509.1| FeS cluster assembly protein sufD [Escherichia coli KTE143]
Length = 340
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 150 DGVYVGSLLGVSDGIMKRVSDFISEFQCG-------DLFWSINGMGAPDLGVIYVPAGCK 202
DG YV +L ++G VS I++ + G ++F + A + I V G +
Sbjct: 7 DGRYVSALSDATEGSGYEVS--INDDRQGLPDAIQAEVFLHLTESLAHSVTHIAVKRGQR 64
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSV 261
P+ L +++ V +++ ++ R + + EG E +IE FV ND ++ +
Sbjct: 65 PVKPLLLMHIT---QGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSL--NDARHFTGAR 119
Query: 262 LEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHV 318
+ + ++H L + S + AH TA + + GG + RHN
Sbjct: 120 FTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDATAFSHSFL---LGGAVLRHNTST 176
Query: 319 QQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGN 376
Q G ++ ++S + V ++ D +R L+H +G+C RQLHK IV+ G+AVF+G
Sbjct: 177 QLNGENSTLRINSLAMPVKNEVCD--TRTWLEHNKGFCNSRQLHKTIVSDK-GRAVFNGL 233
Query: 377 VKV 379
+ V
Sbjct: 234 INV 236
>gi|192291123|ref|YP_001991728.1| FeS assembly protein SufD [Rhodopseudomonas palustris TIE-1]
gi|192284872|gb|ACF01253.1| FeS assembly protein SufD [Rhodopseudomonas palustris TIE-1]
Length = 437
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 134/341 (39%), Gaps = 29/341 (8%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
++ D+ + S+ +P + R + T P R+ E +++TD + +
Sbjct: 12 DTASDNFAAVSARVPGAGKVADTRRQALDTFQRIGLPHRRIEDWKYTDLRALMREVLPLA 71
Query: 114 TRPSSSLDVSTDAQFP--------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
P ++ +A LVL+DG + L+ L G+ + SL +
Sbjct: 72 AAPEAAALAQAEAAAKLHAIDGVRRLVLVDGVLAPGLSELAGLEAGLSIRSLREA----L 127
Query: 166 KRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG---NVDSK 222
+ D + D ++N D VI V G + P+++ +++ G
Sbjct: 128 QSGDDRVLSLDTADPMVALNTALMTDGLVIEVADGTTLTRPLHILHIASGGAPAAMFTRS 187
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
++ + N V ++E +V EG Y + + IG ++ + + S
Sbjct: 188 RISLGNAAVAT---------VVESYVAGEGASAYQVHDSAVITIGDHARLDYVRIVEDSR 238
Query: 283 NAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQD 342
A +I V + + ++TGG SR+ V G +E E + +LL Q D
Sbjct: 239 EAFNITSATVAVGAHAHFNAFGITTGGLASRYQAVVTVAGSHSEVETNGVNLLNGKQHAD 298
Query: 343 LHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
+ L+++H +C R+ + +V G +VF G + V +
Sbjct: 299 --TTLVMNHDVPHCVSREGFRAVV-DDRGHSVFQGRINVRQ 336
>gi|298207477|ref|YP_003715656.1| FeS assembly protein SufD [Croceibacter atlanticus HTCC2559]
gi|83850113|gb|EAP87981.1| FeS assembly protein SufD [Croceibacter atlanticus HTCC2559]
Length = 437
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 14/316 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------D 125
+ +R + + +P++K E +++T + + + ++D D
Sbjct: 24 VHDIRSEAIKAFEEQGFPTKKQEAWKYTSLNSVLKQDYSIFPKKEDAIDYRDVKKYFIHD 83
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
++V IDG + ++ V + S + + ++ ++ D S+N
Sbjct: 84 IDTYNIVFIDGIYSSHLSQTTHDKFDVCLMSSALNHEKYKPVIENYFNKIAPKDGLNSLN 143
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
+ + I++P V+ PI + ++ GN S L PR +V+V E V IIE
Sbjct: 144 TAFSHEGAYIHIPKNKLVDKPIQI--VNFATGNEASLLLQ---PRNLVVVGENSHVQIIE 198
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEV 305
N + N+V E+ K V + +QN +A+ I T + Q+ S +
Sbjct: 199 RHQSLNDNPVF-TNAVTEIFADKRAIVDYYKIQNDRQSASLIDNTYIDQKGESLCSVHTF 257
Query: 306 STGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA 365
S GGKL+R+N++ Q G + L+ ++ Q D ++ + P Q +K I
Sbjct: 258 SFGGKLTRNNLNFYQNGERINSVLNGVTIIEDKQHVDHNTLVHHIEPNCESHQDYKGIFD 317
Query: 366 HSLGQAVFDGNVKVNR 381
VF+G V VN+
Sbjct: 318 DK-AVGVFNGKVVVNK 332
>gi|363420543|ref|ZP_09308635.1| fe-s cluster assembly protein sufb [Rhodococcus pyridinivorans
AK37]
gi|359735785|gb|EHK84742.1| fe-s cluster assembly protein sufb [Rhodococcus pyridinivorans
AK37]
Length = 481
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG R++ +QN S N ++ + E E ++ + G K++
Sbjct: 255 DSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTKRTKVEAGGSMEWIDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G E+ S Q QD +++L P + K VA G+A +
Sbjct: 315 YPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIVSKS-VARGGGRASYR 373
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 374 GLVQVNK 380
>gi|312139627|ref|YP_004006963.1| fe-s cluster assembly protein sufb [Rhodococcus equi 103S]
gi|311888966|emb|CBH48279.1| Fe-S cluster assembly protein SufB [Rhodococcus equi 103S]
Length = 481
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG R++ +QN S N ++ + E E ++ + G K++
Sbjct: 255 DSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTKRTKVEAGGSMEWIDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G E+ S Q QD +++L P + K VA G+A +
Sbjct: 315 YPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIVSKS-VARGGGRASYR 373
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 374 GLVQVNK 380
>gi|68536061|ref|YP_250766.1| Fe-S cluster assembly ABC transporter permease [Corynebacterium
jeikeium K411]
gi|68263660|emb|CAI37148.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium jeikeium K411]
Length = 480
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 201 IYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKT 253
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E E V+ + G K++
Sbjct: 254 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKCEEGGTMEWVDGNIGSKVTMK 313
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S Q QD ++++ P + K VA + G+A +
Sbjct: 314 YPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVHMAPHTSSNIVSKS-VARAGGRAAYR 372
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 373 GLVQVNK 379
>gi|327313029|ref|YP_004328466.1| FeS assembly protein SufD [Prevotella denticola F0289]
gi|326945567|gb|AEA21452.1| FeS assembly protein SufD [Prevotella denticola F0289]
Length = 447
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 139/324 (42%), Gaps = 46/324 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
L ++RD + + +P RK E +++TD +Q + P L+++
Sbjct: 26 LNEVRDKAFEDFRRLGFPDRKVERYKYTD--------MQKLFEPDYGLNLNRLEIPVNPY 77
Query: 125 ---DAQFPSLVLIDGFIQN-----SALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFIS 173
P+L FI N AL + L DG+ V SL ++ ++++ I+
Sbjct: 78 ETFKCDVPNLSTSLYFIVNDQFYTKALPKTKLNDGIIVDSLNRIATEHPELVRKYYGRIA 137
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+ D ++N M A D IYVP ++E + + +++ +VD + N RV++
Sbjct: 138 HTE-ADAVTALNTMLAQDGLFIYVPKNVQMERTV--QVVNILRSDVD----LMVNRRVLI 190
Query: 234 LVEEGGEVGIIEEFVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
++EEG + + F N + A V+E +G ++ + L+ + +
Sbjct: 191 VLEEGAKAQFL--FCDHAADNRNFLATQVIEAFVGDNARLELNCLEETHAKNTRVSNVYI 248
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
Q+ S ++ ++R+ + + G +E + +V+D++Q + + L+DH
Sbjct: 249 EQQRNSRVSHNVITLHNGVTRNMLDLVFKGEGSECFCNG--CVVADKSQHVDNNTLIDHQ 306
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGN 376
+C ++ L + V DGN
Sbjct: 307 VPHC-------TSNELYKYVLDGN 323
>gi|294083586|ref|YP_003550343.1| Fe-S center production/stability protein SufD [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663158|gb|ADE38259.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 421
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 138/326 (42%), Gaps = 32/326 (9%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT------RPSSS 119
+L Q L +R + ++ WP E +RFT + + + P R +S+
Sbjct: 9 NLDQMTGLGGVRSDALARWQASGWPDANVEAWRFTRLGAVIARDLVPAIQGGETGRETSA 68
Query: 120 LDVSTDAQFPSLVL--IDGFIQNSALNLSNLPDG-VYVGSLLGVSDGIMKRVSDFI-SEF 175
A+ + V+ +G I ++L+ LPDG V SL D I V+ ++
Sbjct: 69 TIAKIAAEMQAHVIRFYNGMIDVASLD--GLPDGMVATHSLTSDFDAIAAEVAGLAPNDH 126
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
G+L + G + V AG ++ P+ L + +G NV + +P ++V V
Sbjct: 127 PVGNLSLAAMSSGLR----LSVAAGVQITQPVLLAFEG-DGENVSA------HPVLMVDV 175
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQE 295
G I E + G + + + + ++ ++ +Q + ++ H+ T +
Sbjct: 176 GMGSAAVIAEWHQSQLGLNA----PLCALRLADKARLDYAKVQAEGADSVHLAATGIALG 231
Query: 296 TASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY 355
S + +S GG+L+R HV G E LS+ +L Q D+ + +DH G+
Sbjct: 232 EESVFAGFSISAGGQLARLETHVTLTGETAECGLSAIYLGRDKQHHDITT--YMDHAVGH 289
Query: 356 CR--QLHKCIVAHSLGQAVFDGNVKV 379
C Q+ + ++ + + VF G V V
Sbjct: 290 CHSNQIIRGVLDDA-SRGVFQGKVHV 314
>gi|218463659|ref|ZP_03503750.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli Kim 5]
Length = 281
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 11/186 (5%)
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
V+ VPA ++ENP+ +++ + G +LP+S G + +IE G
Sbjct: 4 VVDVPADTELENPLEIQF--IHAGGQTHTRLPVS-------FGAGVKATVIERHRAVTG- 53
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
D + + + ++ IGKG ++ LQ Q + H+ V + L ++ GGKL R
Sbjct: 54 DAAFVSHISDITIGKGTELTWIILQQQGADDTHLGQIRVDLGADAKLRLFVINAGGKLVR 113
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVF 373
+H++ G + L +LL +D D+ L D P ++ + +V + VF
Sbjct: 114 QELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVV-FDRAKGVF 172
Query: 374 DGNVKV 379
G ++V
Sbjct: 173 QGMIRV 178
>gi|407646718|ref|YP_006810477.1| FeS assembly protein SufB [Nocardia brasiliensis ATCC 700358]
gi|407309602|gb|AFU03503.1| FeS assembly protein SufB [Nocardia brasiliensis ATCC 700358]
Length = 478
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 199 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 251
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 252 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGAVMEWVDGNIGSKVTMK 311
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G E+ S Q QD +++L P + K VA G+A +
Sbjct: 312 YPAVWMTGEYARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSNIISKS-VARGGGRASYR 370
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 371 GLVQVNK 377
>gi|325676697|ref|ZP_08156371.1| FeS assembly protein SufB [Rhodococcus equi ATCC 33707]
gi|325552479|gb|EGD22167.1| FeS assembly protein SufB [Rhodococcus equi ATCC 33707]
Length = 481
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG R++ +QN S N ++ + E E ++ + G K++
Sbjct: 255 DSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTKRTKVEAGGSMEWIDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G E+ S Q QD +++L P + K VA G+A +
Sbjct: 315 YPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIVSKS-VARGGGRASYR 373
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 374 GLVQVNK 380
>gi|397168399|ref|ZP_10491837.1| feS assembly protein SufD [Enterobacter radicincitans DSM 16656]
gi|396089934|gb|EJI87506.1| feS assembly protein SufD [Enterobacter radicincitans DSM 16656]
Length = 423
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 148/344 (43%), Gaps = 52/344 (15%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS++L Q L + R + Q +L P+RK E +++T + +SQ
Sbjct: 4 LPNSSNALQQWHHLFETRGGARSEVAQQHLQQMLRLGLPTRKQENWKYTPLDGLLNSQF- 62
Query: 112 PITRPSSSLDVSTDAQFPSLVL-IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSD 170
S+S V+T AQ +L L +D A+ L DG + L + G S
Sbjct: 63 ----VSASATVNT-AQRDALALPVD------AIRLV-FVDGQFSAELSDDTAG-----SG 105
Query: 171 FISEFQCG----------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
F F ++F + A ++ + V + P+ L +++ +
Sbjct: 106 FDVTFSDARHSLPAPVQPEMFLHLTESLAQNVTWVQVARNQRPAKPLLLMHIT---QGLA 162
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH---SYL 277
+++ ++ R + + +G E I E +V ++ S L + + + H ++
Sbjct: 163 GEEMNTAHYRHHLELAQGAEATIYEHYVSL-SEQPHFTGSRLTMNVAANAHLHHVKLAFE 221
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
QS + AH A + + GG + RHN Q G +T+ ++S + V
Sbjct: 222 NPQSYHFAHNDLLLGADAAADSHSFL---LGGLVLRHNTSTQLNGENTQLNINSLAMPVK 278
Query: 338 DQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 279 SEVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|386395547|ref|ZP_10080325.1| FeS assembly protein SufD [Bradyrhizobium sp. WSM1253]
gi|385736173|gb|EIG56369.1| FeS assembly protein SufD [Bradyrhizobium sp. WSM1253]
Length = 440
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 135/338 (39%), Gaps = 26/338 (7%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--------K 106
++ D S++ LP + +R + +T P R+ E +++TD +
Sbjct: 13 AVSDLFASAAGRLPGSPSVIAVRREAFETYERLGLPHRRIEEWKYTDLRALVGEVLPLAA 72
Query: 107 SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
+ + R + ++ A LVL+DG +L L V V +L V +
Sbjct: 73 APDAAALKRAADAVKAHAIAGARKLVLVDGVFAADLSDLKALGSEVSVKTLREVLENKAN 132
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+ + + D S+N A D VI V G + P+ L +++ +
Sbjct: 133 PAAADLLQTISSDAVISLNAAMATDGVVISVADGAQPSAPVQLIHVA-------TASSAS 185
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
S R + + +G IIE FV Y N + + +G V H L + S +A +
Sbjct: 186 SFTRSHLRIGKGARATIIESFVAAGKTSAYQVNDAVILWVGDNADVAHIRLMDDSPDAVN 245
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
I V + ++TG +SR + G +E ++ +LL +T+ +
Sbjct: 246 ITSQFVTVGANTKLNFFNMTTGAAVSRLQGFITLAGEGSELSVNGVNLL--QKTEHGDTT 303
Query: 347 LLLDH--PRGYCRQLHKCIV---AHSLGQAVFDGNVKV 379
L++DH P R++ + ++ AHS VF G + V
Sbjct: 304 LVVDHAVPNCVSREVFRAVIDDRAHS----VFQGRIIV 337
>gi|452945438|gb|EME50956.1| fe-s cluster assembly protein sufb [Rhodococcus ruber BKS 20-38]
Length = 481
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG R++ +QN S N ++ + E E ++ + G K++
Sbjct: 255 DSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTKRTKVEAGGSMEWIDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G E+ S Q QD +++L P + K VA G+A +
Sbjct: 315 YPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIVSKS-VARGGGRASYR 373
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 374 GLVQVNK 380
>gi|380693250|ref|ZP_09858109.1| ABC transporter permease [Bacteroides faecis MAJ27]
Length = 447
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + ++++ P DV + V+ D F
Sbjct: 42 FPTRKMEKYKYTDISKYFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL +LP+GV GSL V+ + V + + D + N A D V YV
Sbjct: 101 NKALPKGHLPEGVIFGSLKEVAAEHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDSVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV G+ L+ + I V+QE S L ++ +R+
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIADKNQHVDNNTSIDHAVPNC 310
>gi|114327987|ref|YP_745144.1| sufD protein [Granulibacter bethesdensis CGDNIH1]
gi|114316161|gb|ABI62221.1| sufD protein [Granulibacter bethesdensis CGDNIH1]
Length = 441
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 141/360 (39%), Gaps = 44/360 (12%)
Query: 33 VSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSR 92
V+LQ P T F+ + + L D +P + +R ++Q T P++
Sbjct: 9 VALQ---PLQTLGVSFLSRF-QGLRDRMPGDGA----------IRAEAAQVFDRTGLPTQ 54
Query: 93 KDEPFRFTDTSMIKSSQI-QPITRPSSS----LDVSTDAQFPSLVLIDGFIQNSALNLSN 147
+ E +++T + + +P+T+ S L D P LV +DG +
Sbjct: 55 RVEAWKYTSLRPLADIRFREPLTQTDGSASRQLGDVPDLGAPRLVFLDGRFR-------- 106
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCGDLFWSINGMGAPDLGVIYVPAGCK 202
PD G L G DGI S F G ++N M A D V+ + +G
Sbjct: 107 -PDLSDAGLLEGSRDGIDLEHFGHSSAFGERTGSDGVPLVALNTMLAEDGMVLTISSGIA 165
Query: 203 VENPIYLKYLS-VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSV 261
+ + S + G VD +PR + + G + ++E G+ Y N+V
Sbjct: 166 AGTIVLVNLASDMSGEAVDF------HPRHTIRLGSGASLTLVEICRGR---GTYLHNAV 216
Query: 262 LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQL 321
++ + + + H QN+ +A HI YE ++ GG+++R H +
Sbjct: 217 TQISVAEDAVLEHIRWQNEDQHAFHIATVFADVAARGRYEAFVLNMGGRVARAEFHARLD 276
Query: 322 GPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
G + LL Q D+ S + P RQ + ++A + VF G ++V R
Sbjct: 277 GEGGAVHVHGAQLLRDQQVGDITSIVRHTAPGCSSRQAVRNVLA-GRSRGVFQGKIEVTR 335
>gi|111024146|ref|YP_707118.1| FeS assembly protein [Rhodococcus jostii RHA1]
gi|397737724|ref|ZP_10504389.1| feS assembly protein SufB [Rhodococcus sp. JVH1]
gi|110823676|gb|ABG98960.1| FeS assembly protein [Rhodococcus jostii RHA1]
gi|396926456|gb|EJI93700.1| feS assembly protein SufB [Rhodococcus sp. JVH1]
Length = 486
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG R++ +QN S N ++ + E E ++ + G K++
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTKRTKVEAGGSMEWIDGNIGSKVTMK 319
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G E+ S Q QD +++L P + K VA G+A +
Sbjct: 320 YPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPYTSSTIISKS-VARGGGRASYR 378
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 379 GLVQVNK 385
>gi|453382238|dbj|GAC83269.1| iron-sulfur cluster assembly protein SufB [Gordonia paraffinivorans
NBRC 108238]
Length = 484
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 258 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWVDGNIGSKVTMK 317
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 318 YPAVWLTGEHAKGEVLSVAFAGPGQHQDTGSKMVHLAPNTSSNIVSKS-VARGGGRASYR 376
Query: 375 GNVKVN 380
G VKVN
Sbjct: 377 GLVKVN 382
>gi|444311366|ref|ZP_21146976.1| FeS assembly protein SufD [Ochrobactrum intermedium M86]
gi|443485282|gb|ELT48074.1| FeS assembly protein SufD [Ochrobactrum intermedium M86]
Length = 425
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 137/333 (41%), Gaps = 36/333 (10%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L DS LP + RD++ ++L PSR+ E + +TD + +
Sbjct: 18 ALIDSFADRMGDLPGNGDVVVARDAALESLKENGIPSRRIESWHYTD--------FRTLL 69
Query: 115 RPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF 171
+ + D S Q P+L+ + N +N P GV SL V + +
Sbjct: 70 KGVAPFDTSAGTQALPALIAGSSIVAASNGVALAANAPQGV---SLTPVREALAD--GSL 124
Query: 172 ISEFQC---GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+++ + D IN D ++ + G ++E P+ L+ + +K +
Sbjct: 125 VTQLRSRGFDDTIGQINAAYVSDGWMVSIADGTELEAPLELQNI---------QKAGQGH 175
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R V + + I+E G EG+ ++ SV V +G G ++ L++ A +
Sbjct: 176 TRFPVRIGANVKATIVERQNGGEGD--AFSTSVNHVTVGDGAEILWVILRDFG-QATQLS 232
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL- 347
S L ++ GGKL R VHV G D++ EL +LL D D+ +
Sbjct: 233 QFNATMGKGSRLTLYIINAGGKLVRQEVHVNVAGEDSDFELRGLNLLADDSHTDVTMTVG 292
Query: 348 -LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
L+++ R ++ + +V + VF G ++V
Sbjct: 293 HLVENTR--STEIVRNVV-KDRARGVFQGMIRV 322
>gi|354597121|ref|ZP_09015138.1| FeS assembly protein SufD [Brenneria sp. EniD312]
gi|353675056|gb|EHD21089.1| FeS assembly protein SufD [Brenneria sp. EniD312]
Length = 441
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I + AG + E P+YL L + G D+ L + R + VE G IIE +V +
Sbjct: 150 LIRLRAGQQAEKPLYL--LHISSGRQDAA-LNTVHHRHHLNVERGAGAKIIEHYVSLD-E 205
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
++ + L + G+ +V H L ++ H + + G L+R
Sbjct: 206 QAHFTGARLTISAGENSRVGHIKLAFEAAAGYHFSHNDLVLARDAQVRSHSFLLGAGLTR 265
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGY--CRQLHKCIVAHSLGQA 371
H+ Q G ++S + V + D +R L+H GY RQLHK IV + +A
Sbjct: 266 HHTSAQMNGEGANLAINSLIMPVGSEVCD--TRTYLEHNDGYGESRQLHKTIV-NDRAKA 322
Query: 372 VFDGNVKV 379
VF+G +KV
Sbjct: 323 VFNGMIKV 330
>gi|402843466|ref|ZP_10891861.1| FeS assembly protein SufD [Klebsiella sp. OBRC7]
gi|423103453|ref|ZP_17091155.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5242]
gi|376386117|gb|EHS98834.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5242]
gi|402276884|gb|EJU25979.1| FeS assembly protein SufD [Klebsiella sp. OBRC7]
Length = 424
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 43/340 (12%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS-----------QTLLSTPWPSRKDEPFRFT--DTSMIK 106
LP+SS++L Q L +S S Q LL P+RK E +++T DT + +
Sbjct: 4 LPNSSNALQQ---WHHLFESQSGQRSPQAHQHLQQLLRLGLPTRKHENWKYTPLDTLLNQ 60
Query: 107 S-SQIQPITRPSSSLD-VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ QP T ++ D ++ + LV +DG Q SA +L D + D
Sbjct: 61 TFVAAQPQTLTAARRDELALTVEAWRLVFVDG--QFSA----SLSDDLAASGYEVQVDNE 114
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+++ D + ++F + A + I V + P+ + +L+ + S ++
Sbjct: 115 RQQLPDAVQP----EVFLHLTESLATTVTHIRVRRNQHPDKPLLIMHLT---RGLASDEM 167
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH---SYLQNQS 281
++ R + +E G + IIE ++ ++ ++ + L + + ++H ++ QS
Sbjct: 168 NTAHYRHHLALESGAQATIIEHYLSL-NDERHFTGARLTMTVADNAHLQHIKLAFENAQS 226
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
+ AH R +A G + RH+ Q G ++ ++S + V+ +
Sbjct: 227 YHFAHNDLALGRDASAFS---SSFLLGSSVLRHHTSTQLKGENSTLRINSLAMPVNGEVC 283
Query: 342 DLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
D SR LDH GYC RQLHK IV + G+AVF+G + V
Sbjct: 284 D--SRTWLDHQVGYCNSRQLHKTIV-NDKGRAVFNGLINV 320
>gi|260578755|ref|ZP_05846662.1| FeS assembly protein SufB [Corynebacterium jeikeium ATCC 43734]
gi|258603053|gb|EEW16323.1| FeS assembly protein SufB [Corynebacterium jeikeium ATCC 43734]
Length = 480
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 201 IYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKT 253
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E E V+ + G K++
Sbjct: 254 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKCEEGGTMEWVDGNIGSKVTMK 313
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S Q QD ++++ P + K VA + G+A +
Sbjct: 314 YPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVHMAPYTSSNIVSKS-VARAGGRAAYR 372
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 373 GLVQVNK 379
>gi|205352908|ref|YP_002226709.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207857122|ref|YP_002243773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|375123731|ref|ZP_09768895.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|378954916|ref|YP_005212403.1| hypothetical protein SPUL_1189 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|421358130|ref|ZP_15808428.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|421364604|ref|ZP_15814836.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421366607|ref|ZP_15816809.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421373572|ref|ZP_15823712.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421377043|ref|ZP_15827142.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|421381543|ref|ZP_15831598.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|421385222|ref|ZP_15835244.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|421390450|ref|ZP_15840425.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|421393710|ref|ZP_15843654.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|421398244|ref|ZP_15848152.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|421404056|ref|ZP_15853900.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|421409567|ref|ZP_15859357.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|421413291|ref|ZP_15863045.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421418602|ref|ZP_15868303.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|421422278|ref|ZP_15871946.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|421426484|ref|ZP_15876112.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|421432764|ref|ZP_15882332.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|421434769|ref|ZP_15884315.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|421441807|ref|ZP_15891270.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421444629|ref|ZP_15894059.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|421448081|ref|ZP_15897476.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
gi|436627186|ref|ZP_20515174.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436792622|ref|ZP_20521585.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE30663]
gi|436795745|ref|ZP_20522498.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|436809028|ref|ZP_20528408.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|436815216|ref|ZP_20532767.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|436844639|ref|ZP_20538397.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436854030|ref|ZP_20543664.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436857571|ref|ZP_20546091.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436864745|ref|ZP_20550712.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436873691|ref|ZP_20556415.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436878110|ref|ZP_20558965.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|436888348|ref|ZP_20564677.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436895868|ref|ZP_20568624.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436901749|ref|ZP_20572659.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436912210|ref|ZP_20578039.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|436922142|ref|ZP_20584367.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436927120|ref|ZP_20586946.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436936161|ref|ZP_20591601.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436943351|ref|ZP_20596297.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|436951161|ref|ZP_20600216.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436961514|ref|ZP_20604888.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436970892|ref|ZP_20609285.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436983506|ref|ZP_20614095.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436994360|ref|ZP_20618831.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437007087|ref|ZP_20623138.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|437024008|ref|ZP_20629217.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|437030330|ref|ZP_20631300.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437040710|ref|ZP_20634845.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437053965|ref|ZP_20642764.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437058681|ref|ZP_20645528.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|437070496|ref|ZP_20651674.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|437076371|ref|ZP_20654734.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|437081266|ref|ZP_20657718.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|437091570|ref|ZP_20663170.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|437101783|ref|ZP_20666232.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|437121065|ref|ZP_20671705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437130976|ref|ZP_20677106.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437138727|ref|ZP_20681209.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|437145582|ref|ZP_20685489.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|437156913|ref|ZP_20692449.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|437164322|ref|ZP_20697139.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437165569|ref|ZP_20697661.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|437180270|ref|ZP_20706038.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|437186123|ref|ZP_20709392.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|437258853|ref|ZP_20716773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|437268423|ref|ZP_20721893.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|437277262|ref|ZP_20726781.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|437293318|ref|ZP_20732033.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|437312340|ref|ZP_20736448.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|437332491|ref|ZP_20742182.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 17927]
gi|437343796|ref|ZP_20745964.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS4]
gi|437409708|ref|ZP_20752492.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|437452162|ref|ZP_20759643.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|437460717|ref|ZP_20761671.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|437473500|ref|ZP_20765801.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|437499686|ref|ZP_20774110.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|437514494|ref|ZP_20777857.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|437525455|ref|ZP_20779764.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|437560857|ref|ZP_20786141.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437577804|ref|ZP_20791153.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437594871|ref|ZP_20795788.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|437601184|ref|ZP_20797507.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437613764|ref|ZP_20801644.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437653854|ref|ZP_20810269.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437663641|ref|ZP_20814078.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437681585|ref|ZP_20818505.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|437696921|ref|ZP_20822584.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|437714935|ref|ZP_20827768.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|437733861|ref|ZP_20832106.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437764660|ref|ZP_20835045.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|437801153|ref|ZP_20838094.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|438031412|ref|ZP_20855324.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-5646]
gi|438088089|ref|ZP_20859550.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|438099942|ref|ZP_20863686.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|438110521|ref|ZP_20867919.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|438124307|ref|ZP_20872544.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|445135138|ref|ZP_21383131.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|445170586|ref|ZP_21395759.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445223988|ref|ZP_21403487.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445322216|ref|ZP_21412135.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|445326420|ref|ZP_21412584.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|445353036|ref|ZP_21420928.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445357157|ref|ZP_21422077.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|205272689|emb|CAR37603.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708925|emb|CAR33255.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326627981|gb|EGE34324.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|357205527|gb|AET53573.1| hypothetical protein SPUL_1189 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|395984093|gb|EJH93283.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395988434|gb|EJH97590.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|395989262|gb|EJH98396.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395996691|gb|EJI05736.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|396000665|gb|EJI09679.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|396001506|gb|EJI10518.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|396014260|gb|EJI23146.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|396016659|gb|EJI25526.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|396017593|gb|EJI26458.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|396024864|gb|EJI33648.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|396027136|gb|EJI35900.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|396031317|gb|EJI40044.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|396037880|gb|EJI46524.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|396040379|gb|EJI49003.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396041593|gb|EJI50216.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|396048980|gb|EJI57523.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|396053991|gb|EJI62484.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|396059150|gb|EJI67605.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|396063109|gb|EJI71513.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|396067060|gb|EJI75420.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|396073681|gb|EJI81981.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
gi|434942790|gb|ELL49020.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|434956082|gb|ELL49855.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE30663]
gi|434962079|gb|ELL55310.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434962168|gb|ELL55394.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|434966845|gb|ELL59680.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|434973332|gb|ELL65720.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|434979225|gb|ELL71217.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434982833|gb|ELL74641.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434989723|gb|ELL81273.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434995780|gb|ELL87096.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|434998448|gb|ELL89669.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|435008047|gb|ELL98874.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|435010058|gb|ELM00844.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435015757|gb|ELM06283.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435021183|gb|ELM11572.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435024460|gb|ELM14666.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435026455|gb|ELM16586.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|435036961|gb|ELM26780.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435038999|gb|ELM28780.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435043550|gb|ELM33267.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|435050653|gb|ELM40157.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435051628|gb|ELM41130.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435057181|gb|ELM46550.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435064519|gb|ELM53647.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435065944|gb|ELM55049.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435070003|gb|ELM59002.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|435073815|gb|ELM62670.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|435082095|gb|ELM70720.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435087166|gb|ELM75683.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435088979|gb|ELM77434.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435090467|gb|ELM78869.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|435094494|gb|ELM82833.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|435105668|gb|ELM93705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|435111885|gb|ELM99773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|435112476|gb|ELN00341.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|435123762|gb|ELN11253.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|435124950|gb|ELN12406.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435126143|gb|ELN13549.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435132249|gb|ELN19447.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|435135520|gb|ELN22629.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|435137043|gb|ELN24114.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|435139650|gb|ELN26634.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435150037|gb|ELN36731.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|435154251|gb|ELN40838.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|435158997|gb|ELN45367.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|435166100|gb|ELN52102.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|435173448|gb|ELN58958.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|435174602|gb|ELN60044.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|435180757|gb|ELN65862.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|435183472|gb|ELN68447.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|435188469|gb|ELN73182.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 17927]
gi|435191573|gb|ELN76130.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS4]
gi|435204707|gb|ELN88371.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|435208482|gb|ELN91891.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|435221009|gb|ELO03283.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|435223634|gb|ELO05656.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|435225020|gb|ELO06953.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|435229493|gb|ELO10854.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|435238183|gb|ELO18832.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435242746|gb|ELO23050.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435248311|gb|ELO28197.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|435251401|gb|ELO31023.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|435261466|gb|ELO40621.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435264239|gb|ELO43171.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435264757|gb|ELO43652.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435266281|gb|ELO45044.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435270913|gb|ELO49397.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|435276509|gb|ELO54511.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|435285698|gb|ELO63063.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|435286928|gb|ELO64160.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435304123|gb|ELO79928.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|435308190|gb|ELO83185.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|435317932|gb|ELO90932.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|435325540|gb|ELO97405.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|435327470|gb|ELO99159.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-5646]
gi|435331728|gb|ELP02826.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|444846388|gb|ELX71568.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|444862211|gb|ELX87070.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444868734|gb|ELX93349.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444869620|gb|ELX94192.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|444873213|gb|ELX97514.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444881601|gb|ELY05639.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|444886757|gb|ELY10502.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
Length = 423
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 146/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVQPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++ H L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLHHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQ HK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQSHKTIVSDK-GRAVFNGLINV 319
>gi|404258330|ref|ZP_10961651.1| iron-sulfur cluster assembly protein SufB [Gordonia namibiensis
NBRC 108229]
gi|403403107|dbj|GAC00061.1| iron-sulfur cluster assembly protein SufB [Gordonia namibiensis
NBRC 108229]
Length = 484
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 258 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWVDGNIGSKVTMK 317
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 318 YPAVWLTGEHAKGEVLSVAFAGPGQHQDTGSKMVHLAPNTSSNIISKS-VARGGGRASYR 376
Query: 375 GNVKVN 380
G +KVN
Sbjct: 377 GLIKVN 382
>gi|377560563|ref|ZP_09790061.1| iron-sulfur cluster assembly protein SufB [Gordonia otitidis NBRC
100426]
gi|377522289|dbj|GAB35226.1| iron-sulfur cluster assembly protein SufB [Gordonia otitidis NBRC
100426]
Length = 477
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 198 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 251 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 310
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 311 YPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAPHTSSNIISKS-VARGGGRASYR 369
Query: 375 GNVKVN 380
G +KVN
Sbjct: 370 GLIKVN 375
>gi|424852688|ref|ZP_18277085.1| FeS assembly protein SufB [Rhodococcus opacus PD630]
gi|356667353|gb|EHI47424.1| FeS assembly protein SufB [Rhodococcus opacus PD630]
Length = 486
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG R++ +QN S N ++ + E E ++ + G K++
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNWSNNVYNLVTKRTKVEAGGSMEWIDGNIGSKVTMK 319
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G E+ S Q QD +++L P + K VA G+A +
Sbjct: 320 YPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPYTSSTIISKS-VARGGGRASYR 378
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 379 GLVQVNK 385
>gi|357018483|ref|ZP_09080757.1| FeS assembly protein SufB [Mycobacterium thermoresistibile ATCC
19527]
gi|356481773|gb|EHI14867.1| FeS assembly protein SufB [Mycobacterium thermoresistibile ATCC
19527]
Length = 490
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 211 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 263
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ GG+ R++ +QN S N ++ R E + E V+ + G K++
Sbjct: 264 DSLHSAVVEIIVKPGGRCRYTTIQNWSNNVYNLVTKRARAEAGATMEWVDGNIGSKVTMK 323
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD +++L P + K VA G+A +
Sbjct: 324 YPAVWMTGEHAKGEVLSVAFAGPGQHQDTGAKMLHLAPNTSSNIVSKS-VARGGGRASYR 382
Query: 375 GNVKVNR 381
G V++N+
Sbjct: 383 GLVQINK 389
>gi|398827252|ref|ZP_10585466.1| FeS assembly protein SufD [Phyllobacterium sp. YR531]
gi|398220098|gb|EJN06558.1| FeS assembly protein SufD [Phyllobacterium sp. YR531]
Length = 423
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 136/354 (38%), Gaps = 47/354 (13%)
Query: 36 QTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDE 95
Q T ++T D FV ++ E LP + RD++ + L + PSR+ E
Sbjct: 8 QPTAAESTLVDAFVDRMGE------------LPGDGEVVSARDNAIEALKTQGLPSRRVE 55
Query: 96 PFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNS----ALNLSNLPDG 151
+ +TD + S + SS S A + +G N+ A+ + +
Sbjct: 56 AWHYTDLRTLLRSIPAYDSAAGSSALPSVIAGSSVATVSNGIALNAPKIEAVTFTKFSET 115
Query: 152 VYVGSL---LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY 208
+ G L + DG D IN D I V G ++++P+
Sbjct: 116 LANGEAIRHLAIRDG--------------DDAIGQINAAYVTDGWNIVVADGVELDSPLE 161
Query: 209 LKYLSVEG-GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
++ G G+V + P+ + G + +IE G EG ++ SV + I
Sbjct: 162 IQNAQTRGQGHV---RFPVQFGK-------GVKATVIERQTGGEGEG--FSTSVSNLTIA 209
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTET 327
++ L+ Q +A + T S L V+ GGKL R VHV G ++
Sbjct: 210 DDAEINWIILREQGADATQLAQFTATLGTNSKLTLYVVNAGGKLVRQEVHVLVKGEGSDF 269
Query: 328 ELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
+L +LL D D+ L Q+ + +V + VF G +KVNR
Sbjct: 270 QLRGVNLLAGDTHTDVTMTLGHLVENTTSVQIVRNVVTDR-ARGVFQGQIKVNR 322
>gi|255325014|ref|ZP_05366120.1| FeS assembly protein SufB [Corynebacterium tuberculostearicum
SK141]
gi|311739474|ref|ZP_07713309.1| FeS assembly protein SufB [Corynebacterium pseudogenitalium ATCC
33035]
gi|255297579|gb|EET76890.1| FeS assembly protein SufB [Corynebacterium tuberculostearicum
SK141]
gi|311305290|gb|EFQ81358.1| FeS assembly protein SufB [Corynebacterium pseudogenitalium ATCC
33035]
Length = 479
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 200 IYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKS 252
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E E V+ + G K++
Sbjct: 253 DSLHSAVVEIIVKKGGRCRYTTIQNWSSNVYNLVTKRTKVEEGGTMEWVDGNIGSKVTMK 312
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S +Q QD +++ P + K VA + G+A +
Sbjct: 313 YPAVWMTGPYAKGEVLSVAFAGENQFQDTGAKMTHMAPHTSSNIVSKS-VARAGGRAAYR 371
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 372 GLVQVNQ 378
>gi|383817627|ref|ZP_09972938.1| FeS assembly protein SufB [Mycobacterium phlei RIVM601174]
gi|383340098|gb|EID18415.1| FeS assembly protein SufB [Mycobacterium phlei RIVM601174]
Length = 477
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 198 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ GG+ R++ +QN S N ++ R E + E ++ + G K++
Sbjct: 251 DSLHSAVVEIIVKAGGRCRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMK 310
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD +++L P + K VA G+A +
Sbjct: 311 YPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPNTSSNIVSKS-VARGGGRASYR 369
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 370 GLVQVNK 376
>gi|367472260|ref|ZP_09471843.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
gi|365275344|emb|CCD84311.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
Length = 441
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 137/335 (40%), Gaps = 21/335 (6%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQPI 113
L D + LP + +R ++ + P R+ E +R+TD T M ++ ++ +
Sbjct: 14 LADLYQGARRYLPGGEEITAVRAAAFDRFTAVGLPHRRVEAWRYTDLRTQMKEAKRLASL 73
Query: 114 ------TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
+ + D+ A F LV++DG +++NL G+ + +
Sbjct: 74 PDDAAKAKAREAKDLFAGAGFRKLVIVDGAFVPELSDIANLEPGLTIQPMADALAADKPL 133
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+S + D GV I V G + PI++ +++ N + +
Sbjct: 134 LSQRLGAIVPDDDPALALNTALAANGVVILVAPGTALSRPIHVAFVTT---NWVATSM-- 188
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
R V + G I+E G +G++ Y N+ +++V+G ++ H + ++ +A H
Sbjct: 189 -FTRSQVNIGAGASATIVESHQGPDGSE-YQVNTAMQLVVGDEARIDHVKVVSEGSSALH 246
Query: 287 IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSR 346
I + + + GG L R+ + V+ G T ++ LL Q D +
Sbjct: 247 IGSLLANIGARATFNQLGFVAGGSLVRNQLFVRMAGEGTVADIRGGSLLSGTQHAD--TT 304
Query: 347 LLLDHP--RGYCRQLHKCIVAHSLGQAVFDGNVKV 379
L ++H G R+ K +V + +AVF G + V
Sbjct: 305 LSIEHAAENGQSRETFKAVVGDT-ARAVFQGKITV 338
>gi|113953876|ref|YP_731675.1| FeS assembly protein SufD [Synechococcus sp. CC9311]
gi|113881227|gb|ABI46185.1| FeS assembly protein SufD [Synechococcus sp. CC9311]
Length = 410
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 32/301 (10%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPIT--RPSSSLDVSTDAQFPSL------VLIDGFIQN 140
+PSR+ E +R TD +++ + RP S S D+ +PS+ ++IDG
Sbjct: 34 FPSRRQESWRLTDLRRLEALFQLSLADQRPHRS---SADS-WPSVPEQALRLVIDG--SQ 87
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAG 200
L +LP G+ SLL ++ + + + +S +C W + ++ +
Sbjct: 88 DPLQGVSLPAGI---SLLEGAE-LEQALGHTLSRCRCAS-DWPVELNHGVSQQILALRIR 142
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
KV P+ L ++ D+ +P RV++LVEE E+ ++ K G + +
Sbjct: 143 GKVP-PVELVMVA-----ADAMLVPT---RVLLLVEEKAELDCLQVLSAK-GQAAH--SH 190
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
+LE+ +G+ KV H L A + AV QE+ S Y LV VS G R + Q
Sbjct: 191 LLEIHLGQESKVNHGLLALGDGQEALLANLAVEQESRSHYSLVSVSQGWLFGRLEPSLVQ 250
Query: 321 LGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
+ + + +D+ +H+ + + P G Q+ K I A ++F+G ++V
Sbjct: 251 VDGQASASIHGLSVTAADEQFAVHTAMRFEGPEGTLDQVQKTIAADR-SHSIFNGAIQVP 309
Query: 381 R 381
R
Sbjct: 310 R 310
>gi|343924600|ref|ZP_08764148.1| iron-sulfur cluster assembly protein SufB [Gordonia alkanivorans
NBRC 16433]
gi|409388748|ref|ZP_11240681.1| iron-sulfur cluster assembly protein SufB [Gordonia rubripertincta
NBRC 101908]
gi|343765535|dbj|GAA11074.1| iron-sulfur cluster assembly protein SufB [Gordonia alkanivorans
NBRC 16433]
gi|403201120|dbj|GAB83915.1| iron-sulfur cluster assembly protein SufB [Gordonia rubripertincta
NBRC 101908]
Length = 484
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 258 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWVDGNIGSKVTMK 317
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 318 YPAVWLTGEHAKGEVLSVAFAGPGQHQDTGSKMVHLAPNTSSNIISKS-VARGGGRASYR 376
Query: 375 GNVKVN 380
G +KVN
Sbjct: 377 GLIKVN 382
>gi|375261342|ref|YP_005020512.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
oxytoca KCTC 1686]
gi|397658434|ref|YP_006499136.1| iron-sulfur cluster assembly protein SufD [Klebsiella oxytoca E718]
gi|365910820|gb|AEX06273.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
oxytoca KCTC 1686]
gi|394346735|gb|AFN32856.1| Iron-sulfur cluster assembly protein SufD [Klebsiella oxytoca E718]
Length = 424
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 150/340 (44%), Gaps = 43/340 (12%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS-----------QTLLSTPWPSRKDEPFRFTDTSMIKSS 108
LP+SS++L Q L +S S Q LL P+RK E +++T + +
Sbjct: 4 LPNSSNALQQ---WHHLFESQSGQRSPQAHQHLQQLLRLGLPTRKHENWKYTPLDALLNQ 60
Query: 109 QI---QPITRPSSSLD-VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
QP T ++ D ++ + LV +DG Q SA +L D + D
Sbjct: 61 TFVAAQPQTLTAARRDELALPVEAWRLVFVDG--QFSA----SLSDDLAASGYEVQVDNE 114
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+++ D + ++F + A + I V + + P+ + +L+ + S ++
Sbjct: 115 RQQLPDAVQP----EVFLHLTESLATTVTHIRVRRNQRPDKPLLIMHLT---RGLASDEM 167
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH---SYLQNQS 281
++ R + +E G + IIE ++ ++ ++ + L + + ++H ++ QS
Sbjct: 168 NTAHYRHHLALESGAQATIIEHYLSL-NDERHFTGARLTMTVADNAHLQHIKLAFENAQS 226
Query: 282 LNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQ 341
+ AH R +A G + RH+ Q G ++ ++S + V+ +
Sbjct: 227 YHFAHNDLALGRDASAFS---SSFLLGSSVLRHHTSTQLKGENSTLRINSLAMPVNGEVC 283
Query: 342 DLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
D SR LDH GYC RQLHK IV + G+AVF+G + V
Sbjct: 284 D--SRTWLDHQVGYCNSRQLHKTIV-NDKGRAVFNGLINV 320
>gi|239831807|ref|ZP_04680136.1| FeS assembly protein SufD [Ochrobactrum intermedium LMG 3301]
gi|239824074|gb|EEQ95642.1| FeS assembly protein SufD [Ochrobactrum intermedium LMG 3301]
Length = 425
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 137/333 (41%), Gaps = 36/333 (10%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L DS LP + RD++ ++L PSR+ E + +TD + +
Sbjct: 18 ALIDSFADRMGDLPGNGDVVVARDAALESLKENGIPSRRVESWHYTD--------FRTLL 69
Query: 115 RPSSSLDVSTDAQ-FPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF 171
+ + D S Q P+L+ + N +N P GV SL V + +
Sbjct: 70 KGVAPFDTSAGTQALPALIAGSSIVAASNGVALAANAPQGV---SLTPVREALAD--GSL 124
Query: 172 ISEFQC---GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+++ + D IN D ++ + G ++E P+ L+ + +K +
Sbjct: 125 VTQLRSRGFDDTIGQINAAYVSDGWMVSIADGTELEAPLELQNI---------QKAGQGH 175
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R V + + I+E G EG+ ++ SV V +G G ++ L++ A +
Sbjct: 176 TRFPVRIGANVKATIVERQNGGEGD--AFSTSVNHVTVGDGAEILWVILRDFG-QATQLS 232
Query: 289 WTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL- 347
S L ++ GGKL R VHV G D++ EL +LL D D+ +
Sbjct: 233 QFNATMGKGSRLTLYIINAGGKLVRQEVHVNVAGEDSDFELRGLNLLADDSHTDVTMTVG 292
Query: 348 -LLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
L+++ R ++ + +V + VF G ++V
Sbjct: 293 HLVENTR--STEIVRNVV-KDRARGVFQGMIRV 322
>gi|403731088|ref|ZP_10949215.1| iron-sulfur cluster assembly protein SufB [Gordonia rhizosphera
NBRC 16068]
gi|403202319|dbj|GAB93546.1| iron-sulfur cluster assembly protein SufB [Gordonia rhizosphera
NBRC 16068]
Length = 483
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 204 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 256
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 257 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 316
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 317 YPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAPNTSSNIVSKS-VARGGGRASYR 375
Query: 375 GNVKVN 380
G +K+N
Sbjct: 376 GLIKIN 381
>gi|339018835|ref|ZP_08644958.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter tropicalis
NBRC 101654]
gi|338752049|dbj|GAA08262.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter tropicalis
NBRC 101654]
Length = 424
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 225 PIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
P+S +PR V VEEG + +I + G Y N V+E+ + + H +Q +S +
Sbjct: 168 PVSFHPRHSVTVEEGARLSLI---CVQGGQGRYLHNPVMELSVAANATLNHVTIQTESDD 224
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
AA + + E Y+ + G LSRH VH + P E ++ L+ Q D+
Sbjct: 225 AACLATLYAQIEERGSYDSFVLGLGAALSRHEVHARLNAPHAEVHVNGAQRLLGRQVGDV 284
Query: 344 HSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
S + P RQ + ++ + VF G V V R
Sbjct: 285 TSVITHAAPDCRSRQTVQNVL-DGQSRGVFQGKVLVER 321
>gi|325856465|ref|ZP_08172154.1| FeS assembly protein SufD [Prevotella denticola CRIS 18C-A]
gi|325483434|gb|EGC86407.1| FeS assembly protein SufD [Prevotella denticola CRIS 18C-A]
Length = 447
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 139/324 (42%), Gaps = 46/324 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
L ++RD + + +P RK E +++TD +Q + P L+++
Sbjct: 26 LNEVRDKAFEDFRRLGFPDRKVERYKYTD--------MQKLFEPDYGLNLNRLEIPVNPY 77
Query: 125 ---DAQFPSLVLIDGFIQN-----SALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFIS 173
P+L FI N AL + L DG+ V SL ++ ++++ I+
Sbjct: 78 ETFKCDVPNLSTSLYFIVNDQFYTKALPKTKLNDGIIVDSLNRIAAEHPELVRKYYGRIA 137
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+ D ++N M A D IYVP ++E + + +++ +VD + N RV++
Sbjct: 138 HTE-ADAVTALNTMLAQDGLFIYVPKNVQMERTV--QVVNILRSDVD----LMVNRRVLI 190
Query: 234 LVEEGGEVGIIEEFVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
++EEG + + F N + A V+E +G ++ + L+ + +
Sbjct: 191 VLEEGAKAQFL--FCDHAADNRNFLATQVIEAFVGDNARLELNCLEETHAKNTRVSNVYI 248
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
Q+ S ++ ++R+ + + G +E + +V+D++Q + + L+DH
Sbjct: 249 EQQRNSRVSHNVITLHNGVTRNMLDLVFKGEGSECFCNG--CVVADKSQHVDNNTLIDHQ 306
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGN 376
+C ++ L + V DGN
Sbjct: 307 VPHC-------TSNELYKYVLDGN 323
>gi|198244393|ref|YP_002215755.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|445142250|ref|ZP_21385936.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445149790|ref|ZP_21389391.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|197938909|gb|ACH76242.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|444849675|gb|ELX74784.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444857654|gb|ELX82658.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
Length = 423
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 146/343 (42%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPL-QKLRDSSS-------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L ++ R+S + Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKRESRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q SS+ L + DA L+ +DG F+ QNS ++S
Sbjct: 64 QQCATISSAQRDALALQIDA--VRLLFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVQPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++ H L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLHHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQ HK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQSHKTIVSDK-GRAVFNGLINV 319
>gi|323495958|ref|ZP_08101024.1| dufD protein [Vibrio sinaloensis DSM 21326]
gi|323318993|gb|EGA71938.1| dufD protein [Vibrio sinaloensis DSM 21326]
Length = 423
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 126/313 (40%), Gaps = 47/313 (15%)
Query: 86 STPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS------LDVSTDAQFPSLVLIDGFIQ 139
S PS K+E +++T S +Q S+ L + DA LV DG
Sbjct: 35 SVGLPSAKEEGWKYTSLEYFYSLPLQSAALQSAENISYEGLSLGIDAY--RLVFFDGHF- 91
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF-ISEFQCGDLFWSINGMGAPDLGVIYVP 198
+ S+ V V L ++ V + +S D F + A +I V
Sbjct: 92 --SARCSDWIPKVRVTPL-----NVLTAVETYELSRSVRADAFTYLTDATASGGVLIEVE 144
Query: 199 AGCKVENPIYLKYLSV-EGGNVDSKK-----LPISNPRVV---VLVEEGGEVGIIEEFVG 249
+V PIYL ++S + G V S + P+S V+ + +E+GG V +
Sbjct: 145 PNTQVTKPIYLLHISSGQNGEVCSYRHHIEMAPLSELEVIEHHISLEQGGGVTL------ 198
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGG 309
S L IG+G +H+ L +S H +R + + + V G
Sbjct: 199 ----------SRLTSYIGEGANYQHTKLIEESKQQHHFGHNDIRLQRDAKAKSTAVLLSG 248
Query: 310 KLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCR--QLHKCIVAHS 367
L RH + G + E ++S + +QT D SR L H +CR Q+HK I+
Sbjct: 249 LLVRHQTSSELSGDNGELAMNSVAMPKDEQTFD--SRTYLKHNAPHCRSEQMHK-IIGRD 305
Query: 368 LGQAVFDGNVKVN 380
G AVFDG + V+
Sbjct: 306 KGNAVFDGMIYVD 318
>gi|408369389|ref|ZP_11167170.1| FeS assembly protein SufD [Galbibacter sp. ck-I2-15]
gi|407745135|gb|EKF56701.1| FeS assembly protein SufD [Galbibacter sp. ck-I2-15]
Length = 438
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 140/346 (40%), Gaps = 35/346 (10%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + + +R + + +P++KDE +++T + + +
Sbjct: 3 LKDKLISSFMAFENRVDVNHAVHDIRTQAIKVFEEKGFPTKKDEAWKYTSLNALLKNDYS 62
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
SS++ + D +V IDG S+L + + G +
Sbjct: 63 VFPEQESSIEFNDIKKYFIHDIDSYRIVFIDGVFS------SHLSETTHEGIDVCTMGAA 116
Query: 165 MKR------VSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
+ + + ++ ++ D ++N + + I VP G V+ PI + Y S
Sbjct: 117 LTKPKYQLVIENYFNKIVDKEDSLTALNTAFSREGAFINVPKGKVVQKPIQVLYFST--- 173
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
+ + PR +V+V E V IIE N N+V E+ K G V + +
Sbjct: 174 --GKESAQMVQPRNLVVVGENAYVQIIERHQSLNLNPV-LTNAVTEIHTSKRGIVDYYKI 230
Query: 278 QNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVS 337
QN +A+ I T + Q+ S + S GGKL+R+N+ G + L ++
Sbjct: 231 QNDQESASLIDNTYISQQQNSHASVHTFSFGGKLTRNNLQFLHKGEYINSTLKGVTIIED 290
Query: 338 DQTQDLHSRLLLDHPRGYCR--QLHKCIVAHSLGQAVFDGNVKVNR 381
Q D HS L+ H C Q +K I VF+G + V++
Sbjct: 291 KQHVD-HS-TLVQHATPNCESHQDYKGIYG-DRSTGVFNGRIIVDK 333
>gi|262405456|ref|ZP_06082006.1| FeS assembly protein SufD [Bacteroides sp. 2_1_22]
gi|293370445|ref|ZP_06616998.1| FeS assembly protein SufD [Bacteroides ovatus SD CMC 3f]
gi|294646235|ref|ZP_06723889.1| FeS assembly protein SufD [Bacteroides ovatus SD CC 2a]
gi|294809097|ref|ZP_06767815.1| FeS assembly protein SufD [Bacteroides xylanisolvens SD CC 1b]
gi|298480552|ref|ZP_06998749.1| FeS assembly protein SufD [Bacteroides sp. D22]
gi|336404465|ref|ZP_08585160.1| FeS assembly protein SufD [Bacteroides sp. 1_1_30]
gi|345510641|ref|ZP_08790205.1| FeS assembly protein SufD [Bacteroides sp. D1]
gi|423214859|ref|ZP_17201387.1| FeS assembly protein SufD [Bacteroides xylanisolvens CL03T12C04]
gi|229442663|gb|EEO48454.1| FeS assembly protein SufD [Bacteroides sp. D1]
gi|262356331|gb|EEZ05421.1| FeS assembly protein SufD [Bacteroides sp. 2_1_22]
gi|292634437|gb|EFF52973.1| FeS assembly protein SufD [Bacteroides ovatus SD CMC 3f]
gi|292638453|gb|EFF56817.1| FeS assembly protein SufD [Bacteroides ovatus SD CC 2a]
gi|294443651|gb|EFG12400.1| FeS assembly protein SufD [Bacteroides xylanisolvens SD CC 1b]
gi|295086249|emb|CBK67772.1| FeS assembly protein SufD, group 1 [Bacteroides xylanisolvens XB1A]
gi|298273373|gb|EFI14937.1| FeS assembly protein SufD [Bacteroides sp. D22]
gi|335942262|gb|EGN04109.1| FeS assembly protein SufD [Bacteroides sp. 1_1_30]
gi|392692122|gb|EIY85360.1| FeS assembly protein SufD [Bacteroides xylanisolvens CL03T12C04]
Length = 447
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 117/281 (41%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++ P DV + V+ D F
Sbjct: 42 FPTRKMEKYKYTDVSKYFEPDYGLNLNRLAIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V+ + V + + D + N A D V YV
Sbjct: 101 NRALPKVNLPEGVIFGSLKEVAGQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV G+ L+ + I V+QE S L ++ +R+
Sbjct: 212 FLATQVIEVFAGENTVFDMYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIADKNQHVDNHTSIDHAVPNC 310
>gi|441508474|ref|ZP_20990398.1| iron-sulfur cluster assembly protein SufB [Gordonia aichiensis NBRC
108223]
gi|441447502|dbj|GAC48359.1| iron-sulfur cluster assembly protein SufB [Gordonia aichiensis NBRC
108223]
Length = 477
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 198 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 251 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 310
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 311 YPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAPHTSSNIVSKS-VARGGGRASYR 369
Query: 375 GNVKVN 380
G +KVN
Sbjct: 370 GLIKVN 375
>gi|383772889|ref|YP_005451955.1| SufD protein [Bradyrhizobium sp. S23321]
gi|381361013|dbj|BAL77843.1| SufD protein [Bradyrhizobium sp. S23321]
Length = 437
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 141/336 (41%), Gaps = 25/336 (7%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQ-IQPI 113
L D ++ +LP + LR + + P + E +++TD +++ ++ + P+
Sbjct: 16 LADLFAAARQTLPGGSRTEALRLEAFDRFSESGLPHARLEGWKYTDLRRLVRDAKPLAPL 75
Query: 114 TRPSSSLDVS------TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
+ +S +D + D L+++DG +L++L GV + S ++ +
Sbjct: 76 S-DASKVDAAVPGAALADLGLRRLLIVDGVFAPDLSDLASLEAGVSIRS---ATEALAAD 131
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
S +S + D S+N A VI V +E PI+L Y++ G S +S
Sbjct: 132 ESVLLSGAER-DPAASLNRAFAASGVVIAVAPDVVLERPIHLAYVTTTG--TPSAMFTVS 188
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ V E V +IE G + +D Y N+ L++ + + L + A HI
Sbjct: 189 R----LEVGERARVTLIETHEGPDLSD-YQVNTALQLTVADDAEFDRIKLTGEGAAALHI 243
Query: 288 KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRL 347
Y +TGG + R+ + V G T+ ++ LL Q D + L
Sbjct: 244 ATLQAEIGARVRYREFGFTTGGAVVRNQLLVTLAGKGTDAQIHQASLLAGRQHAD--TTL 301
Query: 348 LLDHPRG--YCRQLHKCIVAHSLGQAVFDGNVKVNR 381
++DH R++ K +V +AVF G + V +
Sbjct: 302 VIDHVAAGSQSREVFKAVVDDE-ARAVFQGKITVQQ 336
>gi|320334855|ref|YP_004171566.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
gi|319756144|gb|ADV67901.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
Length = 451
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++N + +YVP G +VE P+ + E G + R +V+ EE +
Sbjct: 160 FSALNAALWTNGAFVYVPRGVEVELPLGSFRVMSEAGT-------YTATRTLVVAEENAQ 212
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
V I+E E Y A +E+V+ G +VR+ +QN HI+ + +
Sbjct: 213 VTFIDEQDSDELPGTY-AFGAVELVVKAGARVRYVSVQNWGKGVTHIQRQRGDVDRDATL 271
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ V+ GG LSR + G +++E+ + + DQ D ++ P + L+
Sbjct: 272 NSLVVTMGGTLSRTEMQSYLRGQGSDSEMLALYFANEDQHFDHYTLQHHAAPHAHSDLLY 331
Query: 361 KCIVAHSLGQAVFDGNVKVN 380
K V + VF G +KV+
Sbjct: 332 KG-VGDNQAVGVFSGMIKVD 350
>gi|197285272|ref|YP_002151144.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis HI4320]
gi|227355702|ref|ZP_03840095.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis ATCC 29906]
gi|425068229|ref|ZP_18471345.1| FeS assembly protein SufD [Proteus mirabilis WGLW6]
gi|194682759|emb|CAR42981.1| subunit of cysteine desulfurase activator complex [Proteus
mirabilis HI4320]
gi|227164021|gb|EEI48918.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis ATCC 29906]
gi|404600211|gb|EKB00657.1| FeS assembly protein SufD [Proteus mirabilis WGLW6]
Length = 435
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I + G + P+Y+ L++ G+ +++ +N R + V ++ +IE ++ +G +
Sbjct: 153 ITLKKGVVADKPLYI--LNITQGHA-GQEVNSANYRFHLDVGANAQMQVIEHYISSDGEN 209
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQ---SLNAAHIKWTAVRQETASGYELVEVSTGGKL 311
++ + L IG H L + S + AH + R + Y + G KL
Sbjct: 210 RHFTGARLTATIGDNASFNHIKLGFENGISQHFAHNDLSIGRDARVNSYAFL---LGNKL 266
Query: 312 SRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLG 369
SRH+ G ++E ++S L +++ D +R L H C RQLHK I A G
Sbjct: 267 SRHHTSAALTGENSELSMNSVVLPKANEIAD--TRTWLVHGEKNCLSRQLHKSI-AMDAG 323
Query: 370 QAVFDGNVKV 379
+AVF+G + V
Sbjct: 324 KAVFNGMITV 333
>gi|359774350|ref|ZP_09277720.1| iron-sulfur cluster assembly protein SufB [Gordonia effusa NBRC
100432]
gi|359308499|dbj|GAB20498.1| iron-sulfur cluster assembly protein SufB [Gordonia effusa NBRC
100432]
Length = 485
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 206 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 258
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 259 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWVDGNIGSKVTMK 318
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G E+ S Q QD S+++ P + K VA G+A +
Sbjct: 319 YPAVWLTGEHARGEVLSVAFAGEGQHQDTGSKMVHLAPNTSSNIISKS-VARGGGRASYR 377
Query: 375 GNVKVN 380
G +K+N
Sbjct: 378 GLIKIN 383
>gi|317505957|ref|ZP_07963789.1| FeS assembly protein SufB [Segniliparus rugosus ATCC BAA-974]
gi|316255733|gb|EFV14971.1| FeS assembly protein SufB [Segniliparus rugosus ATCC BAA-974]
Length = 523
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G +V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 244 IYVPKGVQVDIPLQ-AYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKS 296
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ GG+ R++ +QN S N ++ R E+ + E ++ + G K++
Sbjct: 297 DSLHSAVVEIIVKPGGRCRYTTIQNWSNNVYNLVTKRARAESGATMEWIDGNIGSKVTMK 356
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S DQ QD S++L PR + K VA G+ +
Sbjct: 357 YPAVWLTGEHAKGEVLSLAFAGPDQHQDTGSKMLHLAPRTSSNIVSKS-VARGGGRTSYR 415
Query: 375 GNVKVNR 381
G V V++
Sbjct: 416 GLVGVHK 422
>gi|359767043|ref|ZP_09270837.1| iron-sulfur cluster assembly protein SufB [Gordonia
polyisoprenivorans NBRC 16320]
gi|378717806|ref|YP_005282695.1| FeS assembly protein SufB [Gordonia polyisoprenivorans VH2]
gi|359315671|dbj|GAB23670.1| iron-sulfur cluster assembly protein SufB [Gordonia
polyisoprenivorans NBRC 16320]
gi|375752509|gb|AFA73329.1| FeS assembly protein SufB [Gordonia polyisoprenivorans VH2]
Length = 490
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 211 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 263
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 264 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 323
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 324 YPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAPNTSSNIVSKS-VARGGGRASYR 382
Query: 375 GNVKVN 380
G +K+N
Sbjct: 383 GLIKIN 388
>gi|300781150|ref|ZP_07091004.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium genitalium ATCC 33030]
gi|300532857|gb|EFK53918.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium genitalium ATCC 33030]
Length = 468
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G VE P+ Y + N+ + R +++V+E V +E
Sbjct: 189 IYVPKGVHVEIPL-QAYFRINTENMGQFE------RTLIVVDEDAYVHYVEGCTAPIYQS 241
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
+V+E+++ K + R++ +QN S N ++ R E + E V+ + G K++
Sbjct: 242 DSLHAAVVEIIVKKNARCRYTTIQNWSTNVYNLVTQRARAEEGATMEWVDGNIGSKVNMK 301
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP+ E+ S QTQD ++++ P + K V+ + G+A +
Sbjct: 302 YPAVWMTGPNARGEVLSAQFCGEGQTQDTGAKVVHMAPNTSSNIVSKS-VSRNGGRAAYR 360
Query: 375 GNVKVN 380
G V++N
Sbjct: 361 GLVQIN 366
>gi|237720412|ref|ZP_04550893.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450163|gb|EEO55954.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 447
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V ++ + D + N A D V YV
Sbjct: 101 NRALPTGNLPEGVIFGSLKEVAEQHPELVKEYYGQLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV G+ L+ + I V+QE S L ++ +R+
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIADKNQHVDNHTSIDHAVPNC 310
>gi|359422790|ref|ZP_09213936.1| iron-sulfur cluster assembly protein SufB [Gordonia amarae NBRC
15530]
gi|358241777|dbj|GAB03518.1| iron-sulfur cluster assembly protein SufB [Gordonia amarae NBRC
15530]
Length = 478
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 199 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 251
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 252 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 311
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 312 YPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAPHTSSNIVSKS-VARGGGRASYR 370
Query: 375 GNVKVN 380
G +K+N
Sbjct: 371 GLIKIN 376
>gi|284031208|ref|YP_003381139.1| FeS assembly protein SufD [Kribbella flavida DSM 17836]
gi|283810501|gb|ADB32340.1| FeS assembly protein SufD [Kribbella flavida DSM 17836]
Length = 396
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 130/321 (40%), Gaps = 73/321 (22%)
Query: 70 PLPLQKLRD-SSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF 128
P+PLQ + ++S + P P+ ++E +RFT ++K + D
Sbjct: 22 PVPLQARSERTTSYDVADFPVPNGREEEWRFTPVKLLKG--------------LFADEAG 67
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
V +D ++ PDGV V ++ +D + + D ++
Sbjct: 68 AETVKVD----------AHGPDGVVVETV----------AADSVQAGKPQDRIAAVAWAH 107
Query: 189 APDLGVIYVPAGCKVENPIYLK----------YLSVEGGNVDSKKLPISNPRVVVLVEEG 238
AP+ + +PA ++ +P+++ +L VE G + R V+++
Sbjct: 108 APETFAVRIPADAELTDPVHVNVAGLGARGFAHLVVESGR---------HSRATVVIDHT 158
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETAS 298
G + S +E+V+G G ++R +Q + H+ + +
Sbjct: 159 GAGELA---------------SNVEIVVGDGSELRVVTIQQGDAESIHVAQHDAQVGRDA 203
Query: 299 GYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQ 358
V V+ GGK+ R + +V+ GP + EL + S Q + RL +DH +C+
Sbjct: 204 KLRHVAVTLGGKVVRVSTNVRYAGPGGDAELLGVYFAESGQHHE--HRLFVDHEATHCKS 261
Query: 359 --LHKCIVAHSLGQAVFDGNV 377
L+K +A +AV+ G+V
Sbjct: 262 NVLYKGALAGDDARAVWIGDV 282
>gi|409358439|ref|ZP_11236802.1| FeS assembly protein SufB [Dietzia alimentaria 72]
Length = 485
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 206 VYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 258
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ R E + E ++ + G K++
Sbjct: 259 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRARAEEGATMEWIDGNIGSKVTMK 318
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S++L P + K VA G++ +
Sbjct: 319 YPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMLHLAPNTSSNIVSKS-VARGGGRSAYR 377
Query: 375 GNVKVN 380
G +++N
Sbjct: 378 GLIQIN 383
>gi|325269678|ref|ZP_08136291.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella multiformis DSM 16608]
gi|324988046|gb|EGC20016.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella multiformis DSM 16608]
Length = 447
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 139/324 (42%), Gaps = 46/324 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
L ++RD + + +P RK E +++TD +Q + P L+++
Sbjct: 26 LNEVRDKAFEDFRRLGFPDRKVERYKYTD--------MQKLFEPDYGLNLNRLEIPVNPY 77
Query: 125 ---DAQFPSLVLIDGFIQN-----SALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFIS 173
P+L FI N AL + L DG+ V SL ++ ++++ I+
Sbjct: 78 ETFKCDVPNLSTSLYFIVNDQFYAKALPKTKLNDGIIVDSLNRMATEHPELVRKYYGRIA 137
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+ D ++N M A D IYVP ++E + + +++ +VD + N RV++
Sbjct: 138 HTE-ADAVTALNTMLAQDGLFIYVPKNVQMERTV--QVVNILRSDVD----LMVNRRVLI 190
Query: 234 LVEEGGEVGIIEEFVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
++EEG + + F N + A V+E +G ++ + L+ + +
Sbjct: 191 VLEEGAKAQFL--FCDHAADNRNFLATQVIEAFVGDNARLELNCLEETHAKNTRVSNVYI 248
Query: 293 RQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP 352
Q+ S ++ ++R+ + + G +E + +V+D++Q + + L+DH
Sbjct: 249 EQQRNSRVSHNVITLHNGVTRNMLDLVFKGEGSECFCNG--CVVADKSQHVDNNTLIDHQ 306
Query: 353 RGYCRQLHKCIVAHSLGQAVFDGN 376
+C ++ L + V DGN
Sbjct: 307 VPHC-------TSNELYKYVLDGN 323
>gi|225154860|ref|ZP_03723358.1| FeS assembly protein SufD [Diplosphaera colitermitum TAV2]
gi|224804390|gb|EEG22615.1| FeS assembly protein SufD [Diplosphaera colitermitum TAV2]
Length = 447
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 121/287 (42%), Gaps = 27/287 (9%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL----DVSTDAQFPSLV 132
+ ++ + TP+P R E +RF+ T + + + P + ST ++
Sbjct: 46 KRAAYEQFQQTPFPGRTAETWRFSST--LNDAALTGFDLPEDPAINIPNYSTIKHAAEII 103
Query: 133 LIDGFIQNSALNLSNLP-DGVYVGSLLGVSDGIMKRVSDFISE-FQ------CGDLFWSI 184
+ + S LP D G + D ++ SD + + FQ + F ++
Sbjct: 104 ----YSNRQLVARSPLPADLAAKGVIYAPLDEALRNHSDLVQKYFQKLPANLGSEKFVAL 159
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N ++YVP G ++ P L++ ++ G D+K + P +V++E+ ++
Sbjct: 160 NTAFTAAGALLYVPKGVEIAAPFVLQH-TLSG---DNKAV---FPHTLVILEDQARATLV 212
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
E FV E + A+ V ++ G G + + Q S + + ++ E + +
Sbjct: 213 EFFVSAEAGARHLASGVNDLHAGPGAHLTYVGAQAWSQHTLAFQSNSIVAERDARVLSLN 272
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH 351
V GGK +RH H + LGP +E+ + L ++ Q+ R L H
Sbjct: 273 VHLGGKRARHESHSRLLGPGAHSEMLA--LTIASGAQEFDQRTLQTH 317
>gi|325283587|ref|YP_004256128.1| FeS assembly protein SufD [Deinococcus proteolyticus MRP]
gi|324315396|gb|ADY26511.1| FeS assembly protein SufD [Deinococcus proteolyticus MRP]
Length = 450
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G +VE P+ V S+ + R +V+VE+ I+E E D
Sbjct: 173 VYVPRGVEVELPL-------GSFRVMSEANTYTATRTLVVVEDNASAVFIDE-QDSEALD 224
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
+A +E+V+ G ++R+ +QN HI+ + + V+ GG LSR
Sbjct: 225 NAYAIGAVELVVKPGARLRYVSIQNWGKGVTHIQRQRGDVDKDGKLNSLVVTMGGTLSRT 284
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVA-HSLGQAVF 373
+ G E+E+ + + DQ D ++ P Y L+K + A S+G VF
Sbjct: 285 EMQSYVRGSGAESEMLALYFADEDQHFDHYTLQHHAAPNAYSDLLYKGVGADQSVG--VF 342
Query: 374 DGNVKVN 380
G +KV+
Sbjct: 343 SGMIKVD 349
>gi|306836144|ref|ZP_07469130.1| FeS assembly protein SufB [Corynebacterium accolens ATCC 49726]
gi|304567994|gb|EFM43573.1| FeS assembly protein SufB [Corynebacterium accolens ATCC 49726]
Length = 479
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 200 IYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKS 252
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E E V+ + G K++
Sbjct: 253 DSLHSAVVEIIVKKGGRCRYTTIQNWSSNVYNLVTKRTKVEEGGTMEWVDGNIGSKVTMK 312
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S Q QD +++ P + K VA + G+A +
Sbjct: 313 YPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYTSSNIVSKS-VARAGGRAAYR 371
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 372 GLVQVNQ 378
>gi|227503594|ref|ZP_03933643.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Corynebacterium accolens
ATCC 49725]
gi|227075630|gb|EEI13593.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Corynebacterium accolens
ATCC 49725]
Length = 479
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 200 IYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKS 252
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E E V+ + G K++
Sbjct: 253 DSLHSAVVEIIVKKGGRCRYTTIQNWSSNVYNLVTKRTKVEEGGTMEWVDGNIGSKVTMK 312
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S Q QD +++ P + K VA + G+A +
Sbjct: 313 YPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYTSSNIVSKS-VARAGGRAAYR 371
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 372 GLVQVNQ 378
>gi|163759513|ref|ZP_02166598.1| putative iron-sulfur cluster assembly protein [Hoeflea
phototrophica DFL-43]
gi|162283110|gb|EDQ33396.1| putative iron-sulfur cluster assembly protein [Hoeflea
phototrophica DFL-43]
Length = 424
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 129/299 (43%), Gaps = 35/299 (11%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQP 112
+++ D+ + LP + RD + + P+R+ E + +TD ++++
Sbjct: 14 QAILDNYAAVLGQLPGDAKVTSARDELISAISDSGLPTRRVESWHYTDLRNLLRDVSGNT 73
Query: 113 ITRPSSSLD--VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL-----GVSDGIM 165
+ +S++D V+ P +Q + +LS L +G+ + + G + G+M
Sbjct: 74 GSGTASAVDPLVNGSLMLP-------MVQGHSADLSAL-EGMTLAPFMELLASGEAAGMM 125
Query: 166 -KRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+R SD DL +NG D I V A ++ + L+ SV+ G
Sbjct: 126 AERGSD--------DLIGQLNGAFVSDGYTIAVAADASIDKLVELQ--SVQSGGQ----- 170
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
++ R V G + ++E +G + + + ++SV + + G V +Q + +
Sbjct: 171 --AHNRFVASFGTGSKATLVERHLGDDEHSGF-SSSVSTLDVADGADVTWVIVQQRGASD 227
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
H+ + R T + L ++ GGKL+R VHV G D +L + +LL D D+
Sbjct: 228 QHLGQLSARLGTGAKLRLFVINAGGKLTRQEVHVDVAGEDAHFDLRTVNLLAGDSHTDV 286
>gi|377563231|ref|ZP_09792582.1| iron-sulfur cluster assembly protein SufB [Gordonia sputi NBRC
100414]
gi|377529479|dbj|GAB37747.1| iron-sulfur cluster assembly protein SufB [Gordonia sputi NBRC
100414]
Length = 477
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 198 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 251 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 310
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 311 YPAVWLTGEYAKGEVLSVAFAGEGQHQDTGSKMVHLAPHTSSNIVSKS-VARGGGRASYR 369
Query: 375 GNVKVN 380
G +KVN
Sbjct: 370 GLIKVN 375
>gi|375001526|ref|ZP_09725866.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|417358408|ref|ZP_12133310.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|417383730|ref|ZP_12149333.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|417475437|ref|ZP_12170249.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|417531365|ref|ZP_12186104.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|353076214|gb|EHB41974.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353591299|gb|EHC49603.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|353611056|gb|EHC63837.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|353644276|gb|EHC88274.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|353665001|gb|EHD03264.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
Length = 423
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 144/343 (41%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-I 110
LP+SS +L Q L + + S Q +L P+RK E +++T + SQ I
Sbjct: 4 LPNSSKALQQWQHLFEEKGVSRTEQARQHLQQMLRLGLPTRKHEDWKYTPLEGLTHSQFI 63
Query: 111 QPITRPSSS----LDVSTDAQFPSLVLIDG-FI-------QNSALNLSNLPDGVYVGSLL 158
Q S++ L + DA LV +DG F+ QNS ++S
Sbjct: 64 QQCATISAAQRDALALQIDA--VRLVFVDGRFMPELSDSTQNSGFDVS------------ 109
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
V D + E +F + A + I V + P+ L +++
Sbjct: 110 -VRDERQTLAAPVHPE-----VFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHIT---QG 160
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++ H L
Sbjct: 161 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLCHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 220 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 280 EVCD--TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|295132093|ref|YP_003582769.1| FeS assembly protein SufD [Zunongwangia profunda SM-A87]
gi|294980108|gb|ADF50573.1| FeS assembly protein SufD [Zunongwangia profunda SM-A87]
Length = 437
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 142/338 (42%), Gaps = 20/338 (5%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + + ++R + + + +PS+K+E +++T
Sbjct: 3 LKDKLVSSFLAFDEQYQVGDDVHQIRSQAIKDFETIGFPSKKEEAWKYTSLKSTLKHDYS 62
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ ++++ S D LV IDG + N ++ V + S D
Sbjct: 63 IFPKEENAIEYSQIKKYLIHDIDTYDLVFIDGIYSSHLSNTTHDKIDVCLMSSALNKDKF 122
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+ ++ ++ + ++N + I++ + PI + ++ GN S L
Sbjct: 123 KPVIDNYFNKLAPKNGLNALNTAFTKEGAYIHIHKNIMADKPIQI--INFSTGNESSLLL 180
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
PR +++V+E V IIE+ + NSV E+ + V + +QN +
Sbjct: 181 Q---PRNLIVVDENSHVQIIEKHQSLTSHPV-LTNSVTEIFADRRAIVDYYKIQNDKETS 236
Query: 285 AHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLH 344
+ I T + Q+ S + S GG L+R+N++ Q G ++ + ++ Q D +
Sbjct: 237 SLIDNTFIEQKDESNCSVHTFSFGGNLTRNNLNFYQKGERIDSTMKGVTIIEGKQHVDHN 296
Query: 345 SRLLLDHPRGYCRQLHKCIVA-HSLGQAVFDGNVKVNR 381
+ + +P Q +K I + S+G VF+G V V +
Sbjct: 297 TLVHHIYPNCESHQDYKGIFSDKSVG--VFNGKVVVEK 332
>gi|148257191|ref|YP_001241776.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. BTAi1]
gi|146409364|gb|ABQ37870.1| Iron-regulated ABC transporter permease protein SufD
[Bradyrhizobium sp. BTAi1]
Length = 441
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 144/339 (42%), Gaps = 27/339 (7%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQPI 113
L D + LP + +R ++ + P R+ E +R+TD T M ++ ++ +
Sbjct: 14 LADLYQGARRYLPGGEEITAVRAAAFDRFDAVGLPHRRVEAWRYTDLRTQMKEAKRLASL 73
Query: 114 ------TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV----GSLLGVSDG 163
T+ + ++ A F LV++DG +L++L G+ + +L
Sbjct: 74 PDDAAKTKAREASNLFAGAGFRKLVIVDGAFVPELSDLADLEPGLTIQPMADALAADQPL 133
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+++R+ + + D ++N A + VI V G + PI++ +++ N +
Sbjct: 134 LLQRLGPVVPD---DDPALALNTALAANGVVILVAPGTALSRPIHVAFVTT---NWVATS 187
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ R V + G ++E G +G + Y N+ L++V+G ++ H + +
Sbjct: 188 M---FTRSQVNIGAGASATLVESHQGPDGTE-YQVNTALQLVVGDEARIDHVKVVTEGNG 243
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
A HI + + + GG L R+ + V G T ++ LL Q D
Sbjct: 244 ALHISSLLANIGARATFNQLGFVAGGSLVRNQLFVHIAGEGTVADIRGGSLLAGAQHAD- 302
Query: 344 HSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKVN 380
+ L ++H C R+ K +V + +AVF G + V+
Sbjct: 303 -TTLAIEHAAENCQSRETFKAVVGDT-ARAVFQGKITVS 339
>gi|441513421|ref|ZP_20995251.1| iron-sulfur cluster assembly protein SufB [Gordonia amicalis NBRC
100051]
gi|441451719|dbj|GAC53212.1| iron-sulfur cluster assembly protein SufB [Gordonia amicalis NBRC
100051]
Length = 484
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E ++ + G K++
Sbjct: 258 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWIDGNIGSKVTMK 317
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 318 YPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAPNTSSNIVSKS-VARGGGRASYR 376
Query: 375 GNVKVN 380
G +K+N
Sbjct: 377 GLIKIN 382
>gi|389795832|ref|ZP_10198941.1| FeS assembly protein SufD [Rhodanobacter fulvus Jip2]
gi|388430163|gb|EIL87357.1| FeS assembly protein SufD [Rhodanobacter fulvus Jip2]
Length = 434
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 123/296 (41%), Gaps = 24/296 (8%)
Query: 44 FSDPFVIQLAESLEDS-LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
S+P ++ L SL D+ LP S + L +R + + ++ P + E +++T
Sbjct: 1 MSEPALLPLVASLVDAPLPVSGIAW-----LDAMRRDNHEIFVAGGLPLARVEAWKYTAL 55
Query: 103 SMIKSSQI-----QPITR---PSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV 154
+ +TR PS+ D LV ++G + L LP G+ +
Sbjct: 56 RGLARRPFVDGDEAALTRAVDPSALALPGVDGA--RLVFVNGAFRADLSALDALPAGLTL 113
Query: 155 GSLLGV--SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYL 212
L +D R ++ + F IN A D V+ V G K++ P++L +L
Sbjct: 114 QPLSQALHADPDPLRFVLSRRHYEADEAFTQINAAHARDGAVLRVADGVKIDAPLHLVFL 173
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+ L R V+ + EG + ++E + G + + V ++ + +G +
Sbjct: 174 GAPAEGDLAWHL-----RNVIELGEGATLTLVEHHLAS-GEQAHLSTVVGDIELREGAHL 227
Query: 273 RHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
H+ LQ + A+ I+ T++R + L GG L RH++ + +G + E
Sbjct: 228 HHTVLQQAASGASLIRRTSLRLHARAHATLHLAELGGALVRHDLRAELIGDGAQLE 283
>gi|119716777|ref|YP_923742.1| FeS assembly protein SufD [Nocardioides sp. JS614]
gi|119537438|gb|ABL82055.1| Iron-regulated ABC transporter permease protein SufD [Nocardioides
sp. JS614]
Length = 401
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 16/190 (8%)
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
++ VPA + +P+ L + G +V+ + R++V V +V I+ V G+
Sbjct: 111 LLEVPAEAAITDPVVLH---LHGESVED----LVWGRLLVRVGANADVTIV---VNHTGS 160
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSR 313
Y A + V++G G +V LQ+ +A H+ A+R + + +S GG L R
Sbjct: 161 ARYAA--ITTVLVGDGARVNVLTLQDWDDDAVHLGRDAIRVGRDASVKHTSISFGGDLVR 218
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQA 371
+ +V+ GP E EL L +D+ Q L RL DH P+ L+K +
Sbjct: 219 MHANVEYAGPGGEAEL--LGLYFADEGQHLEHRLFADHTAPKTKSHVLYKGALQGQGAHT 276
Query: 372 VFDGNVKVNR 381
V+ GNV + +
Sbjct: 277 VWIGNVLIRK 286
>gi|404214898|ref|YP_006669093.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Gordonia sp. KTR9]
gi|403645697|gb|AFR48937.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Gordonia sp. KTR9]
Length = 483
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 204 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 256
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 257 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWVDGNIGSKVTMK 316
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD S+++ P + K VA G+A +
Sbjct: 317 YPAVWLTGEHAKGEVLSVAFAGPGQHQDTGSKMVHLAPNTSSNIVSKS-VARGGGRASYR 375
Query: 375 GNVKVN 380
G +K+N
Sbjct: 376 GLIKIN 381
>gi|319760494|ref|YP_004124432.1| FeS cluster assembly protein sufD [Candidatus Blochmannia vafer
str. BVAF]
gi|318039208|gb|ADV33758.1| FeS cluster assembly protein sufD [Candidatus Blochmannia vafer
str. BVAF]
Length = 430
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +P + + P+YL L + G +L +SN + E+ IIE FVG N
Sbjct: 146 IKLPKSIETKKPLYL--LHINSGTKIPNQLSLSNSHYYLETEQYTNTSIIEHFVGINENS 203
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR-QETASGYELVEVSTGGKLSR 313
Y N+ ++IGK K+ H L ++ ++ HI + A V + +G K +
Sbjct: 204 -YLFNTRSSILIGKQSKLNHISLIYENQSSYHISNQDININSCAHANSNVFIISGSKFTS 262
Query: 314 HNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHP-RGYCRQLHKCIVAHSLGQAV 372
H ++ + + L+S +L++ + + + + ++ QLHK I+A+ V
Sbjct: 263 HQINSKINHSQSFLSLNSLTILLNKEIGKIQTYVEHNNQNHATSEQLHK-IIANDHSTGV 321
Query: 373 FDGNVKVNR 381
F G +KVN+
Sbjct: 322 FQGLIKVNK 330
>gi|255692958|ref|ZP_05416633.1| FeS assembly protein SufD [Bacteroides finegoldii DSM 17565]
gi|260621269|gb|EEX44140.1| FeS assembly protein SufD [Bacteroides finegoldii DSM 17565]
Length = 449
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 21/279 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++ P DV + V+ D F
Sbjct: 44 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 102
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL ++LP+GV GSL V++ + V + + D + N A D + YV
Sbjct: 103 NKALPKTHLPEGVIFGSLKEVAEQYPELVKKYYGKLADTSKDGVTAFNTTFAQDGVIFYV 162
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ +V+ + N RV++++E+G + ++ + N +
Sbjct: 163 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLLLCDHAMD-NVNFL 215
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVH 317
A V+EV G+ L+ + V+QE S L ++ +R+
Sbjct: 216 ATQVIEVFAGENVVFDMYELEETHTSTVRFSNLYVKQEANSNVHLNGMTLHNGTTRNTTE 275
Query: 318 VQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 276 VLLAGEGAEINLCG--MAIADKNQHVDNNTSIDHAVPNC 312
>gi|110637386|ref|YP_677593.1| iron-regulated ABC transporter membrane-spanning permease
[Cytophaga hutchinsonii ATCC 33406]
gi|110280067|gb|ABG58253.1| Iron-regulated ABC transporter permease protein SufD [Cytophaga
hutchinsonii ATCC 33406]
Length = 425
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 144/344 (41%), Gaps = 36/344 (10%)
Query: 49 VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIK 106
+IQ +LE + PSSS L R + +P+ K E +++T+ ++ K
Sbjct: 9 LIQHFNTLEKT-PSSS-------LLVDTRKEAISAFQELGFPTTKHEEWKYTNLKNTIAK 60
Query: 107 SSQIQPITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNL-PDGVYVGSLLGVS 161
+ I+ S+ D+ P ++ ++G + LS++ GV + +
Sbjct: 61 TYAIESAATFSAD-DIKALTALPIDCYKVIFVNGIFSPA---LSSIDASGVTIEPFQTSN 116
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS-VEGGNVD 220
++K F D ++N A D +I+V A + PI YLS V NV
Sbjct: 117 QEVVKNY--FGKNLPYNDSMVALNVAFATDGTLIHVKAKQHITKPIVCFYLSDVRSANV- 173
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ P V+++VEE ++E G + + N+ ++ K + +QN
Sbjct: 174 -----FAQPSVLIVVEEAASATVVE-LNRSLGKNTAFTNAFTHAILKKEAYLEQYKIQND 227
Query: 281 SLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQT 340
N+ I + + E S ++ G L R+N+++ E L+ +L Q
Sbjct: 228 IDNSNFIHNSQIVHEGKSNSYTTTITLNGGLVRNNLNITLGAEYCEAYLNGLYLEKGAQH 287
Query: 341 QDLHSRLLLDH--PRGYCRQLHKCIV-AHSLGQAVFDGNVKVNR 381
D H+ L+DH P Y +L+K I+ S G VF+G + V +
Sbjct: 288 VDNHT--LVDHAMPHCYSNELYKGILDGKSTG--VFNGKIWVRK 327
>gi|256379161|ref|YP_003102821.1| FeS assembly protein SufB [Actinosynnema mirum DSM 43827]
gi|255923464|gb|ACU38975.1| FeS assembly protein SufB [Actinosynnema mirum DSM 43827]
Length = 481
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E +
Sbjct: 202 IYVPKGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYSS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+V+ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 255 DSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEAGATMEWVDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G + E+ S Q QD ++++ P + K VA G+A +
Sbjct: 315 YPAVYLMGEHAKGEVLSIAFAGEGQHQDTGAKMVHMAPHTSSTIVSKS-VARGGGRASYR 373
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 374 GLVQVNK 380
>gi|423341063|ref|ZP_17318778.1| FeS assembly protein SufD [Parabacteroides johnsonii CL02T12C29]
gi|409222563|gb|EKN15503.1| FeS assembly protein SufD [Parabacteroides johnsonii CL02T12C29]
Length = 450
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 41/349 (11%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-- 107
I L ED + +S + Q L D L +P+ K E +++TD + +
Sbjct: 11 IDLFTRYEDLIRRHASGVQNAPRTQALAD-----LERLGFPTVKSEDYKYTDVAQAFAPD 65
Query: 108 --SQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
I + P + DV P+L +++ + L ++LP+GVY G +
Sbjct: 66 YGVNINRLDIPVNPYDVFR-CDVPNLSTSLYFVVNDTFYDKMLPKAHLPEGVYAGGMRT- 123
Query: 161 SDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
M++ + S + D ++N M A D V+YVP G VE PI L +++
Sbjct: 124 ---FMEKYPEVASRYYGKAAPTGKDGIVALNTMLAQDGFVVYVPEGVVVERPIQL--VNI 178
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVR 273
+VD+ ++N R++V++E E ++ +D + A V+E+ G+G
Sbjct: 179 FRSDVDT----MANRRILVIMEAHSEAKLL--VCDHSIDDVKFLATQVVEIFAGEGAFFD 232
Query: 274 HSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFH 333
+ L+ S++ V+QE S + ++ L+R+N +++ G E L
Sbjct: 233 YYDLEESSVSTTRFASVHVKQEAGSNVLVNGITLNNGLTRNNYYIELNGEQAEATLCGMS 292
Query: 334 LLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV-AHSLGQAVFDGNVKV 379
+L +Q D +S + H YC +L K ++ H++G F G + V
Sbjct: 293 ILDKEQQLDTYSHIT--HAVPYCTSNELFKNVLDDHAVG--AFSGRILV 337
>gi|319784071|ref|YP_004143547.1| FeS assembly protein SufD [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169959|gb|ADV13497.1| FeS assembly protein SufD [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 422
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 140/345 (40%), Gaps = 56/345 (16%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD------------- 101
+L D+ S LP + RD + +T+ P+R+ E + +TD
Sbjct: 15 ALIDAFGDRLSLLPGDGAVMLKRDDAIETI-KHGLPTRRVESWHYTDLRRLLNTVPDFDP 73
Query: 102 TSMIKSSQIQPITRPS---SSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL 158
+M K+ I PI S S L+ +DA+ P L ++ L + + GS
Sbjct: 74 AAMAKA--IAPIVDGSTVVSILNGKSDAKVPVL---------EGVSFQRLSETLVDGS-- 120
Query: 159 GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ + + D ++N D + + G ++E P+ L+ L G
Sbjct: 121 ---------AAAGLDPYGSDDAIGALNTAFVADGYFVDIADGVELEKPVELQNLQAGGQ- 170
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
++ R+ V V G + I+E + G+ +SV ++V+G+G +V +Q
Sbjct: 171 --------THVRLPVRVGAGAKAVIVER---QTGDGAALGSSVSQLVLGEGAEVTWLIVQ 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
Q A H+ + L ++ GG+L R + V+ G + +L +LL D
Sbjct: 220 EQPETATHLAQFKAHIGKNAKLTLFVMNAGGRLVRQEIMVRTTGEGADFKLRGINLLAGD 279
Query: 339 QTQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D+ ++LDH P ++ + +V + VF G + V++
Sbjct: 280 THTDV--TMVLDHAVPHTTSTEIIRNVVTGK-ARGVFQGRINVHQ 321
>gi|299147101|ref|ZP_07040168.1| FeS assembly protein SufD [Bacteroides sp. 3_1_23]
gi|298514986|gb|EFI38868.1| FeS assembly protein SufD [Bacteroides sp. 3_1_23]
Length = 447
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V + + D + N A D V YV
Sbjct: 101 NRALPTGNLPEGVIFGSLKEVAEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV G+ L+ + I V+QE S L ++ +R+
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIADKNQHIDNHTSIDHAVPNC 310
>gi|25028242|ref|NP_738296.1| hypothetical protein CE1686 [Corynebacterium efficiens YS-314]
gi|259507301|ref|ZP_05750201.1| FeS assembly protein SufB [Corynebacterium efficiens YS-314]
gi|23493526|dbj|BAC18496.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165105|gb|EEW49659.1| FeS assembly protein SufB [Corynebacterium efficiens YS-314]
Length = 481
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 202 IYVPKGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ KGG+ R++ +QN S N ++ + E E V+ + G K++
Sbjct: 255 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNLVTKRTKVEEGGTMEWVDGNIGSKVTMK 314
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S Q QD ++++ P + K VA G+A +
Sbjct: 315 YPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVHMAPHTSSNIVSKS-VARGGGRAAYR 373
Query: 375 GNVKVN 380
G V++N
Sbjct: 374 GLVQIN 379
>gi|406835980|ref|ZP_11095574.1| FeS assembly protein SufB [Schlesneria paludicola DSM 18645]
Length = 472
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 14/232 (6%)
Query: 155 GSLLGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY 208
G + +D ++ D + E+ + F ++N IYVP G K+E P+
Sbjct: 147 GVIFTDTDSAVRDYPDLVREYFGTIIPSADNKFAALNSAVWSGGSFIYVPKGVKIEFPL- 205
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
Y + N+ + R +++V+EG V +E + ++V+E+++ +
Sbjct: 206 QAYFRINTQNMGQFE------RTLIIVDEGASVHYVEGCTAPTYSSDSLHSAVVEIMVKR 259
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETE 328
GG+ R++ +QN S N ++ + S E V+ + G KL+ + + P E
Sbjct: 260 GGRCRYTTIQNWSNNVYNLVTKRAKAYGDSLMEWVDGNLGSKLTMKYPAIYLMEPGARGE 319
Query: 329 LSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKVN 380
S Q QD ++++ P R + K I + G+A + G VK
Sbjct: 320 TLSIAFAGKGQHQDAGAKMVHCAPYTSSRVISKSI-SKDGGRAGYRGLVKAT 370
>gi|218264752|ref|ZP_03478464.1| hypothetical protein PRABACTJOHN_04173 [Parabacteroides johnsonii
DSM 18315]
gi|218221801|gb|EEC94451.1| hypothetical protein PRABACTJOHN_04173 [Parabacteroides johnsonii
DSM 18315]
Length = 450
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 41/349 (11%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-- 107
I L ED + +S + Q L D L +P+ K E +++TD + +
Sbjct: 11 IDLFTRYEDLIRRHASGVQNAPRTQALAD-----LERLGFPTVKSEDYKYTDVAQAFAPD 65
Query: 108 --SQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
I + P + DV P+L +++ + L ++LP+GVY G +
Sbjct: 66 YGVNINRLDIPVNPYDVFR-CDVPNLSTSLYFVVNDTFYDKMLPKAHLPEGVYAGGMRT- 123
Query: 161 SDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
M++ + S + D ++N M A D V+YVP G VE PI L +++
Sbjct: 124 ---FMEKYPEVASRYYGKAAPTGKDGIVALNTMLAQDGFVVYVPEGVVVERPIQL--VNI 178
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVR 273
+VD+ ++N R++V++E E ++ +D + A V+E+ G+G
Sbjct: 179 FRSDVDT----MANRRILVIMEARSEAKLL--VCDHSIDDVKFLATQVVEIFAGEGAFFD 232
Query: 274 HSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFH 333
+ L+ S++ V+QE S + ++ L+R+N +++ G E L
Sbjct: 233 YYDLEESSVSTTRFASVHVKQEAGSNVLVNGITLNNGLTRNNYYIELNGEQAEATLCGMS 292
Query: 334 LLVSDQTQDLHSRLLLDHPRGYC--RQLHKCIV-AHSLGQAVFDGNVKV 379
+L +Q D +S + H YC +L K ++ H++G F G + V
Sbjct: 293 ILDKEQQLDTYSHIT--HAVPYCTSNELFKNVLDDHAVG--AFSGRILV 337
>gi|331697201|ref|YP_004333440.1| FeS assembly protein SufB [Pseudonocardia dioxanivorans CB1190]
gi|326951890|gb|AEA25587.1| FeS assembly protein SufB [Pseudonocardia dioxanivorans CB1190]
Length = 478
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 199 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 251
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+V+ KGG+ R++ +QN S N ++ + E + E V+ + G K++
Sbjct: 252 DSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNLVTKRAKAEEGATMEWVDGNLGSKVTMK 311
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G + E+ S Q QD ++++ P + K VA G+ +
Sbjct: 312 YPAVFLMGEHAKGEVLSIAFAGEGQHQDAGAKMVHLAPNTSSTIISKS-VARGGGRTSYR 370
Query: 375 GNVKVN 380
G V+VN
Sbjct: 371 GLVQVN 376
>gi|261339559|ref|ZP_05967417.1| FeS assembly protein SufD [Enterobacter cancerogenus ATCC 35316]
gi|288318376|gb|EFC57314.1| FeS assembly protein SufD [Enterobacter cancerogenus ATCC 35316]
Length = 423
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 145/338 (42%), Gaps = 40/338 (11%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTS-------M 104
LP+SS+ L Q L + + ++ Q LL P+RK E +++T +
Sbjct: 4 LPNSSNVLQQWHRLFEAQGNTRSEQAEHHLQQLLRLGLPTRKQENWKYTPLDGLLKGEFV 63
Query: 105 IKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ + + P R +L ++ DA LV +DG + L+ S G V I
Sbjct: 64 TRLADVNPTQR--DALALTLDA--VRLVFVDGQFR-PELSDSTQESGFEVA--------I 110
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+ Q ++F + A + I V + + P+ L +++ +D ++
Sbjct: 111 NNDRQSLHAPVQP-EVFLHLTESLAQSVTHISVRRNQRPDKPLLLMHIT---QGLDGDEI 166
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++ R + + EG E +IE +V ND ++ + L + + ++ H L ++
Sbjct: 167 NTAHYRHHIELAEGAEATVIEHYVSL--NDTRHFTGARLTMNVAANAQLHHIKLAFENPV 224
Query: 284 AAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDL 343
+ H + + GG + RHN Q G +T ++S + V + D
Sbjct: 225 SHHFAHNDIALGPDGAADSHSFLLGGAVLRHNTSTQLNGENTTLCINSLAMPVKSEVCD- 283
Query: 344 HSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 284 -TRTWLEHNKGYCNSRQLHKTIVSDK-GRAVFNGLINV 319
>gi|261749665|ref|YP_003257351.1| cysteine desulfurase activator complex subunit SufD
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
gi|261497758|gb|ACX84208.1| cysteine desulfurase activator complex subunit SufD
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
Length = 432
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 139/317 (43%), Gaps = 25/317 (7%)
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD----------VSTD 125
LR S L +PS DE ++ T+ + I + + ++ S + D
Sbjct: 29 LRHKSIDLFLKKGFPSVTDEEWKNTNVNSILNQEYNLFSQLSQQRKDLEYQKIKELIYLD 88
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI- 184
F ++ IDG Q+ + + SN + + +L + + + DF + D ++I
Sbjct: 89 DSFL-IIFIDGKYQSISSHTSN---NIRLSNLASQEE---RTIKDFYGKLSNLDEAFNIL 141
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N + + D IY+P ++ PI + L + G +SK + NPR +++V + V II
Sbjct: 142 NTIFSKDGVYIYIPDNLFLKRPIEI--LHIYTGR-ESKIML--NPRNLIIVGKYSFVKII 196
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVE 304
E + + + NSV E+ ++ + +Q+ + I T V+Q+ S
Sbjct: 197 EHHKCLKKH-LLFNNSVSEIYAFSNSQIEYYKIQDNFDELSIIDNTFVKQDLRSKCSFYT 255
Query: 305 VSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIV 364
S GK R+N++ G T + L LL +Q D H+ + + + QL+K I+
Sbjct: 256 FSFQGKFIRNNLNFSSHGKFTSSYLYGISLLSGEQLVDHHTSMEHLYSNAHSFQLYKNIL 315
Query: 365 AHSLGQAVFDGNVKVNR 381
+ +F+G + V++
Sbjct: 316 WNK-SMGIFNGKILVDK 331
>gi|317047893|ref|YP_004115541.1| FeS assembly protein SufD [Pantoea sp. At-9b]
gi|316949510|gb|ADU68985.1| FeS assembly protein SufD [Pantoea sp. At-9b]
Length = 425
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
++F + A + I + G P+YL L + G + + R + +E
Sbjct: 127 EVFLHLTESLAEEATSIRLARGKAAALPLYL--LHITSGQ--DAGMNTVHHRHHLQLEAS 182
Query: 239 GEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQ 294
E +IE +V ND ++ + + K+ H S+ ++S + AH R
Sbjct: 183 AEAEVIEHYVTL--NDVAHFTGARFTFDVADNAKLSHIKLSFESDKSYHFAHNDVVIGRD 240
Query: 295 ETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRG 354
S + G LSRHN Q G +T ++S L ++ + D +R L+H +G
Sbjct: 241 AQVSTTSFL---LGAGLSRHNTSAQLNGENTNLAMNSLALPINQEVCD--TRSYLEHNKG 295
Query: 355 YC--RQLHKCIVAHSLGQAVFDGNVKV 379
+C RQ+HK IV G+AVF+G +KV
Sbjct: 296 HCMSRQMHKTIV-RDKGRAVFNGMIKV 321
>gi|50120792|ref|YP_049959.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
atrosepticum SCRI1043]
gi|49611318|emb|CAG74765.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 439
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 124/300 (41%), Gaps = 31/300 (10%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVSTDAQFPSLVLIDGFIQNSAL 143
P RK E +++T ++ S++ PS +L + D+ LV IDG
Sbjct: 51 PHRKHEHWKYTPLDVLLSNEFVAPQAPSIDRAAVDALAFAVDSW--RLVFIDGVFN---A 105
Query: 144 NLSNLPDGVY-VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCK 202
LS+ G Y V + G++ ++F + A +I + AG +
Sbjct: 106 ELSDSAWGPYQVNVQASHAHGVLPTAIQ-------SEVFLHLTESLASTSTLIRLAAGQQ 158
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
E P+YL ++S + + L + R + VE IIE +V + + ++ + L
Sbjct: 159 AEKPLYLLHIS----SSQAAALNTVHHRHHLNVERSASAEIIEHYVSLDEH-AHFTGARL 213
Query: 263 EVVIGKGGKVRH---SYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQ 319
V + +V H ++ S + AH R + + G L+RH+ Q
Sbjct: 214 TVNAAENSQVSHYKLAFEAAASYHFAHNDLVLARDARVRSHSFL---LGAGLTRHHTSAQ 270
Query: 320 QLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
G T ++S L V + D + L + G RQLHK IV + +AVF+G +KV
Sbjct: 271 LNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGNGESRQLHKVIV-NDRARAVFNGMIKV 329
>gi|423290619|ref|ZP_17269468.1| FeS assembly protein SufD [Bacteroides ovatus CL02T12C04]
gi|423294115|ref|ZP_17272242.1| FeS assembly protein SufD [Bacteroides ovatus CL03T12C18]
gi|392665272|gb|EIY58800.1| FeS assembly protein SufD [Bacteroides ovatus CL02T12C04]
gi|392676611|gb|EIY70042.1| FeS assembly protein SufD [Bacteroides ovatus CL03T12C18]
Length = 446
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 41 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 99
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V + + D + N A D V YV
Sbjct: 100 NRALPTGNLPEGVIFGSLKEVAEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 159
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 160 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 210
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV G+ L+ + I V+QE S L ++ +R+
Sbjct: 211 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNT 270
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 271 TEVLLAGEGAEINLCG--MAIADKNQHVDNHTSIDHAVPNC 309
>gi|222148791|ref|YP_002549748.1| transport system [Agrobacterium vitis S4]
gi|221735777|gb|ACM36740.1| transport system [Agrobacterium vitis S4]
Length = 424
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 145/354 (40%), Gaps = 40/354 (11%)
Query: 31 IRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWP 90
I+ + ++T +A + + QL + LP + RD L P
Sbjct: 3 IQAANRSTAAEAALVEAYTAQLGD------------LPGDGAVLGARDILFDDLKRAGLP 50
Query: 91 SRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLP 149
+R+ E + +TD +++++ PS ++ A I Q + ++S P
Sbjct: 51 TRRVEAWHYTDLKTLLRAIPDAATLTPSKAV-----APLVEAARIFELRQGLSRDVSA-P 104
Query: 150 DGV----YVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVEN 205
DGV Y SLL DG +D ++ F D ING D + V +V+
Sbjct: 105 DGVKVHAYSESLL---DGTA--AADLVA-FSKDDTIGRINGSFVRDGYRLSVEDNVEVDR 158
Query: 206 PIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
I L+ + +GG S+ R V G + +IE G +SV ++
Sbjct: 159 LIELQ--AYQGGGQ-------SHSRFVASFGSGSKATVIERHR-NSGETAGLISSVSDLD 208
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDT 325
+G+G +V +Q Q L H+ V T + +L ++ GGKL R +HV+ G +
Sbjct: 209 LGEGAEVTWIIVQTQGLADTHLGQIKVVLGTNAKLKLFVINAGGKLVRQEIHVRTAGEGS 268
Query: 326 ETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ L + +LL + D+ L D P ++ + +V + VF G ++V
Sbjct: 269 DFTLRAVNLLGGESHTDVTMTLGHDVPNTTSTEVIRNVV-FDRARGVFQGQIRV 321
>gi|150396679|ref|YP_001327146.1| FeS assembly protein SufD [Sinorhizobium medicae WSM419]
gi|150028194|gb|ABR60311.1| FeS assembly protein SufD [Sinorhizobium medicae WSM419]
Length = 425
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 134/330 (40%), Gaps = 28/330 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L D+ + LP + LRD+ L ++ P+R+ E + +TD + + P
Sbjct: 15 ALVDAYTAQIGDLPGDGAVLSLRDTLVHELKTSGLPTRRVEAWHYTDLRTLLRA--VPAA 72
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGV----YVGSLLGVSDGIMKRVSD 170
P++ + D P ++ ++N ++ N+P+ + Y SLL DG +
Sbjct: 73 DPTAFAE-RVDPLVPGSSVLS--VRNGQADIKNVPEQLTVRSYTESLL---DG---SAAA 123
Query: 171 FISEFQCGDLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+S D ING G G+ I V AG ++E P+ ++ + G ++
Sbjct: 124 GLSVLGADDAIGRING-GLVRGGLEIAVAAGVEIEAPVEIQVVQSHGQ---------AHT 173
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
R V G + +IE + + +SV +V + +G V LQ Q H+
Sbjct: 174 RFPVSFGAGAKATVIERHLSTNAEQSF-VSSVSDVTLAEGADVIWIILQQQGPADTHLGQ 232
Query: 290 TAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLL 349
+ L ++ GGKL R +H + G + L +LL + DL L
Sbjct: 233 IRFDLGKDAKLHLFVINAGGKLVRQELHGRATGEGADLTLRGINLLGGESHTDLTFTLSH 292
Query: 350 DHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
D P ++ + +V + VF G + V
Sbjct: 293 DVPHTTSSEIIRNVV-FDRAKGVFQGKILV 321
>gi|291295169|ref|YP_003506567.1| FeS assembly protein SufD [Meiothermus ruber DSM 1279]
gi|290470128|gb|ADD27547.1| FeS assembly protein SufD [Meiothermus ruber DSM 1279]
Length = 444
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 149/363 (41%), Gaps = 49/363 (13%)
Query: 50 IQLAESL-EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS 108
++L SL D + S L +P LQ R + +T + P+P+ + E +++TD + +
Sbjct: 1 MELTSSLSRDLVLEVSKKLNEPQWLQTKRLEAWETFVKLPYPTTRTEEWKYTDITEVPFE 60
Query: 109 QIQPITRPSSSL--------DVSTDAQFPSLVLIDGFIQNSALNLSNLPD-----GVYVG 155
++ P+ P D AQ + G + L LP+ GV
Sbjct: 61 EL-PLELPKGGASEIPQAVQDRLAQAQLSGYAVFVG----ADLVHVELPEEYRQQGVIFT 115
Query: 156 SLLG--------VSDGIMKRVS--DFISEFQCGDLFWSINGMGAPDL--GV-IYVPAGCK 202
SL V + K V+ D + + I + A GV +Y+P +
Sbjct: 116 SLHQAIAQHPELVEANLFKAVNWHDLVGTQKNRPENSKIPALNAALFTHGVFLYIPKNVE 175
Query: 203 VENPI-YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSV 261
PI KYL EGG +S R +++ + + IEE++ S
Sbjct: 176 FSKPIGVFKYL--EGGR-------LSGSRTLIVGDVNSQAVYIEEYISPARVAPSVNTSS 226
Query: 262 LEVVIGKGGKVRHSYLQNQSLNAAHI-KWTAVRQETASGYELVEVSTGGKLSRHNVHVQQ 320
E+++G G KVRH+++Q H + A Q A+ +LV V+ G +SR V +
Sbjct: 227 TEIIVGPGAKVRHAHIQLLGQGFYHFHRQRAHLQRDAALNDLV-VNMGASISRAEVQSEM 285
Query: 321 LGPDTETELSSFHLLVSDQTQDLHS--RLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVK 378
LGP + +E+ + + D ++ + DH Y L+K A + V+ G +K
Sbjct: 286 LGPGSSSEMLGLYFTTGQEHVDHYTLQHHVADH--AYSDVLYKG-AAKDQSRTVYAGLIK 342
Query: 379 VNR 381
V +
Sbjct: 343 VEQ 345
>gi|288801641|ref|ZP_06407083.1| FeS assembly protein SufD [Prevotella melaninogenica D18]
gi|302344948|ref|YP_003813301.1| FeS assembly protein SufD [Prevotella melaninogenica ATCC 25845]
gi|288335683|gb|EFC74116.1| FeS assembly protein SufD [Prevotella melaninogenica D18]
gi|302149228|gb|ADK95490.1| FeS assembly protein SufD [Prevotella melaninogenica ATCC 25845]
Length = 447
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 140/330 (42%), Gaps = 40/330 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
L ++RD + + +P++K E +++TD +Q + P L+++
Sbjct: 26 LNEVRDKAFEDFRRQGFPTKKVERYKYTD--------MQKLFEPDYGLNLNRLEIPVNPY 77
Query: 125 ---DAQFPSLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGVSDGIMKRVSDFISEFQ 176
P+L FI N +LP DGV V SL V+ + V+ +
Sbjct: 78 DTFKCDVPNLSTSLYFIVNDQFYSKSLPKAKLNDGVIVDSLNHVATERPELVAKYYGRLA 137
Query: 177 C--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D ++N M A D IYVP ++E I + +++ +VD + N RV+++
Sbjct: 138 NTEADAITALNTMLAQDGLFIYVPKNVQLERTI--QVINILRSDVD----LMVNRRVLIV 191
Query: 235 VEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
+EEG + + F +D + A V+E +G + + L+ + +
Sbjct: 192 LEEGAKAQFL--FCDHAADDRNFLATQVIEAYVGANANLELNCLEETHAKNVRVSNVYIE 249
Query: 294 QETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPR 353
Q+ S ++ ++R+ + + G +E + +++D++Q + + L+DH
Sbjct: 250 QQRDSRASHNVITLHNGVTRNMLDLVFKGEGSECFCNG--CVIADKSQHVDNNTLIDHQV 307
Query: 354 GYC--RQLHKCIVAHSLGQAVFDGNVKVNR 381
+C +L+K ++ + F G V V +
Sbjct: 308 PHCTSNELYKYVLDDN-AVGAFAGRVLVRK 336
>gi|383111047|ref|ZP_09931865.1| FeS assembly protein SufD [Bacteroides sp. D2]
gi|382949416|gb|EFS31452.2| FeS assembly protein SufD [Bacteroides sp. D2]
Length = 446
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 41 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 99
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V + + D + N A D V YV
Sbjct: 100 NRALPTGNLPEGVIFGSLKEVAEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 159
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 160 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 210
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV G+ L+ + I V+QE S L ++ +R+
Sbjct: 211 FLATQVIEVFAGENAIFDMYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNT 270
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G +E L + ++D+ Q + + +DH C
Sbjct: 271 TEVLLAGEGSEINLCG--MAIADKNQHVDNHTSIDHAVPNC 309
>gi|160883924|ref|ZP_02064927.1| hypothetical protein BACOVA_01898 [Bacteroides ovatus ATCC 8483]
gi|156110654|gb|EDO12399.1| FeS assembly protein SufD [Bacteroides ovatus ATCC 8483]
Length = 447
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 25/281 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V + + D + N A D V YV
Sbjct: 101 NRALPTGNLPEGVIFGSLKEVAEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHN 315
+ A V+EV G+ L+ + I V+QE S L ++ +R+
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQEANSNVLLNGMTLHNGTTRNT 271
Query: 316 VHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC 356
V G E L + ++D+ Q + + +DH C
Sbjct: 272 TEVLLAGEGAEINLCG--MAIADKNQHVDNHTSIDHAVPNC 310
>gi|312115588|ref|YP_004013184.1| FeS assembly protein SufD [Rhodomicrobium vannielii ATCC 17100]
gi|311220717|gb|ADP72085.1| FeS assembly protein SufD [Rhodomicrobium vannielii ATCC 17100]
Length = 441
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 16/206 (7%)
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
GD+ +++ A +I + G K++ PI+L ++ N + + I + +
Sbjct: 150 GDVVAALSTAFATCGALISIAPGKKIDKPIHLIVIASSEANAYALRHAIK-------LGD 202
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETA 297
G E IIE VG G W+ + L+ IGKG ++H+ L + T E A
Sbjct: 203 GAEATIIETHVGA-GASQAWSYTALD--IGKGAALKHARLTQSAAALHLASATVTLGERA 259
Query: 298 SGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC- 356
YE + GG L+R ++ GP+ + L D L++DH +C
Sbjct: 260 V-YEPTHAAIGGALTRSEGTIRFTGPNARATYNGAILARGHSHVDF--TLVVDHAAPHCE 316
Query: 357 -RQLHKCIVAHSLGQAVFDGNVKVNR 381
R+L K ++ + VF G V V R
Sbjct: 317 SRELVKAVL-DDRAKGVFQGKVAVQR 341
>gi|399036564|ref|ZP_10733598.1| FeS assembly protein SufD [Rhizobium sp. CF122]
gi|398065892|gb|EJL57504.1| FeS assembly protein SufD [Rhizobium sp. CF122]
Length = 424
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 149/356 (41%), Gaps = 44/356 (12%)
Query: 33 VSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSR 92
+++QTT Q T ++ +I+ + LP S + +RD L P+R
Sbjct: 1 MNMQTTSRQ-TAAEAALIEAFNNQVGELPGDGSVIA-------IRDRLLDDLKKAGLPTR 52
Query: 93 KDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSAL--------N 144
+ E + +TD + ++ I P + D ++A+ P ++ S++ +
Sbjct: 53 RIEAWHYTDLKTL----LRAI--PEQAGDAGSEARDP-------LVEESSVLSVIQGVPD 99
Query: 145 LSNLPDGVYVGSLLG-VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV 203
L DG+ + S +S+G + + F D ING D VI V A +
Sbjct: 100 LKASVDGLDISSYAAQLSNGT---AATGLGAFGSDDAIGRINGSFVRDGYVIDVAAETAL 156
Query: 204 ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLE 263
E P+ +++ V G +LPIS V + +IE + +D + + V +
Sbjct: 157 EEPLEIQF--VHAGGQTHTRLPISFGANV-------KATVIERHLAVT-SDAAFVSHVSD 206
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGP 323
+ +G+G ++ +Q Q H+ V + +L ++ GGKL R +H++ G
Sbjct: 207 ITVGEGTELTWIIIQQQGAEDTHLGQIRVDLGADAKLKLFVINAGGKLVRQELHIKVTGE 266
Query: 324 DTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
+ L +LL ++ D+ L + P ++ + +V + VF G ++V
Sbjct: 267 GADLTLRGINLLGAETHTDVTMVLGHNVPHTGSTEVIRNVV-FDRAKGVFQGMIRV 321
>gi|119716776|ref|YP_923741.1| FeS assembly protein SufB [Nocardioides sp. JS614]
gi|119537437|gb|ABL82054.1| Iron-regulated ABC transporter membrane component SufB
[Nocardioides sp. JS614]
Length = 472
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G VE P+ Y + N+ + R +++V+EG V +E +
Sbjct: 193 VYVPPGVHVEIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPVYSS 245
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E++I KGG+ R++ +QN S N ++ E + E V+ + G K++
Sbjct: 246 DSLHSAVVEIIIKKGGRCRYTTIQNWSNNVYNLVTKRATCEAGATMEWVDGNIGSKVTMK 305
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V +G + E S Q QD ++++ P L K VA G+ +
Sbjct: 306 YPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHAAPHTSSSILSKS-VARGGGRTSYR 364
Query: 375 GNVKVN 380
G ++VN
Sbjct: 365 GLIQVN 370
>gi|163849014|ref|YP_001637058.1| FeS assembly protein SufB [Chloroflexus aurantiacus J-10-fl]
gi|222526976|ref|YP_002571447.1| FeS assembly protein SufB [Chloroflexus sp. Y-400-fl]
gi|163670303|gb|ABY36669.1| FeS assembly protein SufB [Chloroflexus aurantiacus J-10-fl]
gi|222450855|gb|ACM55121.1| FeS assembly protein SufB [Chloroflexus sp. Y-400-fl]
Length = 471
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 20/228 (8%)
Query: 161 SDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPI--YLKYL 212
+D +K +F E+ + + ++N +YVP G KV+ P+ Y +
Sbjct: 152 TDTALKEYPEFFKEYFGTIVPAADNKYAALNTAVWSGGSFVYVPKGVKVDIPLQAYFRIN 211
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+ G + R +++++EG E IE + ++V+EV++ KGGK
Sbjct: 212 AERMGQFE---------RTLIIIDEGAEAHYIEGCTAPIYSTNSLHSAVVEVIVKKGGKF 262
Query: 273 RHSYLQNQSLNAAH-IKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSS 331
R++ +QN + N + + AV E AS E V+ + G KL+ V +G E+ S
Sbjct: 263 RYTTIQNWANNIFNLVTKRAVAYEEAS-MEWVDGNIGSKLTMKYPSVYLMGRKARGEVLS 321
Query: 332 FHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFDGNVKV 379
Q QD ++++ P R +K V+ G+ + G KV
Sbjct: 322 VAYAGRGQHQDAGAKMIHLAPETTSRITNKS-VSKDGGKTTYRGLAKV 368
>gi|337269289|ref|YP_004613344.1| FeS assembly protein SufD [Mesorhizobium opportunistum WSM2075]
gi|336029599|gb|AEH89250.1| FeS assembly protein SufD [Mesorhizobium opportunistum WSM2075]
Length = 422
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 54/344 (15%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS------ 108
+L D+ S LP + RD + + + P+R+ E + +TD + ++
Sbjct: 15 ALIDAFGDRLSLLPGDGAVMLKRDDAIEAI-KHGLPTRRVESWHYTDLRRLLNAVPDFDP 73
Query: 109 -----QIQPITRPSSSLDV---STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL-LG 159
+ PI S+ L V +DA+ P++ DGV V L
Sbjct: 74 AAAPKAVGPIVEGSAVLAVLNGKSDAKMPAV------------------DGVTVERLSEK 115
Query: 160 VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
++DG ++ + + D ++N D + + G ++E PI L+ L G
Sbjct: 116 LTDG---SIAPGLDPYGSDDAIGALNTAFVADGYFVDIADGAELEKPIELQNLQAGGQ-- 170
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
++ R+ V V G + I+E + G +SV ++V+G+G V +Q
Sbjct: 171 -------THVRLPVRVGAGAKAVIVER---QAGEGAALTSSVSQLVLGEGADVTWLIVQE 220
Query: 280 QSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQ 339
Q A H+ + L ++ GG+L R + V+ G + +L +LL D
Sbjct: 221 QPETATHLAQFKAHIGKDAKLTLFVMNAGGRLVRQEIVVRTTGEGADFKLRGINLLAGDT 280
Query: 340 TQDLHSRLLLDH--PRGYCRQLHKCIVAHSLGQAVFDGNVKVNR 381
D+ ++LDH P ++ + +V + VF G + V++
Sbjct: 281 HTDV--TMVLDHAVPHTTSTEIVRNVVTGK-ARGVFQGRINVHQ 321
>gi|301308168|ref|ZP_07214122.1| FeS assembly protein SufD [Bacteroides sp. 20_3]
gi|423339831|ref|ZP_17317571.1| FeS assembly protein SufD [Parabacteroides distasonis CL09T03C24]
gi|300833638|gb|EFK64254.1| FeS assembly protein SufD [Bacteroides sp. 20_3]
gi|409228979|gb|EKN21861.1| FeS assembly protein SufD [Parabacteroides distasonis CL09T03C24]
Length = 450
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 24/320 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQF 128
+ LR + +PS + E +++TD + + I + P + DV
Sbjct: 29 MNALRADALANFERLGFPSTRSEDYKYTDVAQAFAPDYGLNINRVAIPVNPYDVFR-CDV 87
Query: 129 PSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
P+L +++ + L ++LP+GVY G L ++ + S + + D
Sbjct: 88 PNLSTSLYFVVNDTFYDKELPKTHLPEGVYAGGLKAFTEQYPEIASKYYGKAAPSSKDGI 147
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N M A D V+YVP VE PI L +++ +VD+ ++N RV+V++E E
Sbjct: 148 IALNTMLAQDGFVVYVPKNVVVERPIQL--VNIFRSDVDT----MANRRVLVIMEPHSEA 201
Query: 242 GIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGY 300
++ +D + A V+E+ +G + + L+ S + V+Q ++
Sbjct: 202 KLL--VCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEESSESTTRFSSVHVKQAASTNV 259
Query: 301 ELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLH 360
+ ++ L+R+N +V+ G E+ L +L +Q D +S + P +L
Sbjct: 260 LVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELF 319
Query: 361 KCIVA-HSLGQAVFDGNVKV 379
K ++ H++G VF G + V
Sbjct: 320 KNVLNDHAVG--VFSGRILV 337
>gi|334563124|ref|ZP_08516115.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium bovis DSM 20582]
Length = 483
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 204 IYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKT 256
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+V+ KGG+ R++ +QN S N ++ + + E V+ + G K++
Sbjct: 257 DSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNLVTKRTKVDEGGTMEWVDGNIGSKVTMK 316
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V GP + E+ S Q QD ++++ P + K VA G+A +
Sbjct: 317 YPAVWMTGPYAKGEVLSVAFAGEGQFQDTGAKMIHMAPHTSSNIVSKS-VARGGGRAAYR 375
Query: 375 GNVKVNR 381
G V++N+
Sbjct: 376 GLVQINK 382
>gi|254786626|ref|YP_003074055.1| FeS assembly protein SufD [Teredinibacter turnerae T7901]
gi|237684877|gb|ACR12141.1| FeS assembly protein SufD [Teredinibacter turnerae T7901]
Length = 440
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 131/320 (40%), Gaps = 20/320 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-------KSSQIQPITRPSSSLDVSTD 125
L + +L P RK E +++T ++ +S+Q P S
Sbjct: 20 LAAVNQQGRNNVLGFTQPGRKTEAWKYTSLRVLDDGRFLEQSNQASPDAAVWDSAHQIEG 79
Query: 126 AQFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL-FWS 183
LV ++G + + + L LPDGV + + +S ++ G+ F++
Sbjct: 80 LDALKLVFVNGVYCADLSSELEGLPDGVELTPFSLATAEQQASISCALNSAVVGEKHFFA 139
Query: 184 INGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+ + GV + V A + PI + +L E S L RV+V + E +
Sbjct: 140 VANSAQVNEGVYLKVRANTLLLTPIQILHLHSESEQQQSAVL-----RVLVDMGESSQAT 194
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYEL 302
+IE+F G +G + NS+ E ++G K + L ++ HI + +
Sbjct: 195 LIEQFAGGDGVANVFVNSLNEFLVGDNAKFDYYRLNLEAETVPHIGGVHANLGRCATFNS 254
Query: 303 VEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYC--RQLH 360
++ G L R ++ V G ++ +L + Q D H+ ++H +C ++
Sbjct: 255 FYIALGSVLKRLDLVVNHRGEGAHCDMQGVYLPRNKQLVDFHT--CIEHAVPHCTSNEIF 312
Query: 361 KCIVAHSLGQAVFDGNVKVN 380
+ IVA +AVF+G + ++
Sbjct: 313 RGIVADE-SKAVFNGRIHIH 331
>gi|423114812|ref|ZP_17102503.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5245]
gi|376383687|gb|EHS96414.1| FeS cluster assembly protein sufD [Klebsiella oxytoca 10-5245]
Length = 424
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 149/343 (43%), Gaps = 49/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMI-----K 106
LP+SS++L Q L + + Q LL P+RK E +++T +
Sbjct: 4 LPNSSNALQQWHHLFEAQSEQRSPQAHQHLQQLLRLGLPTRKHENWKYTPLDALLNHTFV 63
Query: 107 SSQIQPITRPS-SSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
+++ Q +T +L ++ DA LV +DG L D + + G
Sbjct: 64 AAEPQTLTAAQRDALGLAVDAW--RLVFVDGQFN------ERLSDDL-------TASGFE 108
Query: 166 KRVSDF---ISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
RV + + E ++F + A + I V + E P+ + +L+ +
Sbjct: 109 VRVDNDRQPLPEAVQPEVFLHLTESLATSVTHIRVGRHQRPEKPLLIVHLT---RGLAGD 165
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRH---SYLQ 278
++ ++ R + +E G + IIE ++ ND ++ + L + + ++H ++
Sbjct: 166 EMNTAHYRHHLELESGAQATIIEHYLSL--NDAAHFTGARLTMSVADNAHLQHIKLAFEN 223
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
QS + AH R +A + G + RH+ Q G ++ ++S + V++
Sbjct: 224 AQSYHFAHNDLALGRDASAFSSSFL---LGASVLRHHTSTQLNGENSNLRINSLAMPVNN 280
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D SR LDH GYC RQLHK IV + G+AVF+G + V
Sbjct: 281 EVCD--SRTWLDHKVGYCNSRQLHKTIV-NDKGRAVFNGLINV 320
>gi|418051375|ref|ZP_12689460.1| FeS assembly protein SufB [Mycobacterium rhodesiae JS60]
gi|353185032|gb|EHB50556.1| FeS assembly protein SufB [Mycobacterium rhodesiae JS60]
Length = 480
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+E V +E
Sbjct: 201 IYVPKGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEDAYVHYVEGCTAPIYKS 253
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRH 314
++V+E+++ GG+ R++ +QN S N ++ R E + E V+ + G K++
Sbjct: 254 DSLHSAVVEIIVKPGGRCRYTTIQNWSNNVYNLVTKRARAEAGATMEWVDGNIGSKVTMK 313
Query: 315 NVHVQQLGPDTETELSSFHLLVSDQTQDLHSRLLLDHPRGYCRQLHKCIVAHSLGQAVFD 374
V G + E+ S Q QD +++L P + K VA G+A +
Sbjct: 314 YPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPNTSSNIVSKS-VARGGGRASYR 372
Query: 375 GNVKVNR 381
G V+VN+
Sbjct: 373 GLVQVNK 379
>gi|146311419|ref|YP_001176493.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
sp. 638]
gi|145318295|gb|ABP60442.1| Iron-regulated ABC transporter permease protein SufD [Enterobacter
sp. 638]
Length = 423
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 148/343 (43%), Gaps = 50/343 (14%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSS--------QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
LP+SS++L Q L + + + Q +L P+RK E +++T + SQ
Sbjct: 4 LPNSSNALQQWHRLFEAQGETRSEYAQQHLQQMLRLGLPTRKHENWKYTPLDGLLKSQF- 62
Query: 112 PITRPSSSLDVSTDAQFPSLVL-IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSD 170
+TR + DVS AQ +L L ID A+ L DG Y +L ++G S
Sbjct: 63 -VTRLA---DVSP-AQRDALALNID------AVRLV-FVDGCYNPALSDNTEG-----SG 105
Query: 171 FISEFQCG----------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS--VEGGN 218
F E D+F + + + I + + P+ L +++ +EG
Sbjct: 106 FDVEINDNRQALPAPVQPDVFLHLTESLSQSVTHIRIKRNQRPAKPLLLLHITQGLEGDE 165
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
V++ ++ R V + EG + +IE +V ++ + + + + ++ H L
Sbjct: 166 VNT-----AHYRHHVELAEGADATVIEHYVSL-NETAHFTGARVTMNVAANAQLHHIKLA 219
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ H + + GG + RHN Q G +T ++S + V
Sbjct: 220 FENPACHHFAHNDLFMAADAAAFSHSFLLGGSVLRHNTSTQLNGENTTLRINSLAMPVKS 279
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R ++H +GYC RQ+HK IV + G+AVF+G + V
Sbjct: 280 EVCD--TRTWVEHNKGYCNSRQMHKIIV-NDKGRAVFNGMINV 319
>gi|417334099|ref|ZP_12117422.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
gi|353576229|gb|EHC38738.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
Length = 269
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 6/163 (3%)
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
VD +L ++ R + + EG E +IE +V ++ + L + + ++RH L
Sbjct: 7 VDGDELNTAHYRHHLALAEGAEATVIEHYVSLTAAK-HFTGARLTMNVADNAQLRHIKLA 65
Query: 279 NQSLNAAHIKWTAVRQETASGYELVEVSTGGKLSRHNVHVQQLGPDTETELSSFHLLVSD 338
++ ++ H + T + G + RH+ Q G + L+S + V +
Sbjct: 66 FENASSYHFAHNDLLLATDASAFSHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 125
Query: 339 QTQDLHSRLLLDHPRGYC--RQLHKCIVAHSLGQAVFDGNVKV 379
+ D +R L+H +GYC RQLHK IV+ G+AVF+G + V
Sbjct: 126 EVCD--TRTWLEHNKGYCNSRQLHKTIVS-DKGRAVFNGLINV 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,111,813,755
Number of Sequences: 23463169
Number of extensions: 265719081
Number of successful extensions: 657693
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 1658
Number of HSP's that attempted gapping in prelim test: 655252
Number of HSP's gapped (non-prelim): 2387
length of query: 381
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 237
effective length of database: 8,980,499,031
effective search space: 2128378270347
effective search space used: 2128378270347
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)