Query 016853
Match_columns 381
No_of_seqs 119 out of 1505
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 03:24:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016853.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016853hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03176 AllC allantoate amid 100.0 4.2E-55 9.1E-60 428.1 39.9 346 1-379 28-374 (406)
2 PRK13590 putative bifunctional 100.0 1.2E-52 2.5E-57 427.3 41.5 347 1-378 209-556 (591)
3 PRK13799 unknown domain/N-carb 100.0 2E-52 4.3E-57 425.1 40.4 349 1-378 209-558 (591)
4 PRK12891 allantoate amidohydro 100.0 3.8E-52 8.2E-57 409.2 40.9 345 1-379 35-380 (414)
5 TIGR01879 hydantase amidase, h 100.0 4E-51 8.7E-56 400.5 41.2 347 1-379 26-373 (401)
6 PRK12892 allantoate amidohydro 100.0 9.9E-49 2.2E-53 385.3 41.1 344 2-378 35-380 (412)
7 PRK12890 allantoate amidohydro 100.0 5.4E-48 1.2E-52 380.1 40.7 348 1-378 33-381 (414)
8 PRK09290 allantoate amidohydro 100.0 1.1E-46 2.4E-51 370.6 40.8 348 1-378 32-380 (413)
9 PRK12893 allantoate amidohydro 100.0 1.8E-46 3.8E-51 369.3 40.9 343 2-378 36-379 (412)
10 TIGR01891 amidohydrolases amid 100.0 1E-39 2.3E-44 316.0 34.6 310 1-379 14-340 (363)
11 PLN02693 IAA-amino acid hydrol 100.0 1.7E-39 3.7E-44 320.0 34.6 304 1-378 62-386 (437)
12 PRK08588 succinyl-diaminopimel 100.0 1.6E-39 3.4E-44 316.4 32.4 297 1-376 17-344 (377)
13 PLN02280 IAA-amino acid hydrol 100.0 1.5E-38 3.3E-43 315.3 36.5 307 1-378 112-438 (478)
14 PRK07338 hypothetical protein; 100.0 4.1E-39 8.8E-44 316.1 30.9 289 5-376 39-367 (402)
15 PRK06915 acetylornithine deace 100.0 4.9E-39 1.1E-43 317.4 31.1 300 1-377 32-387 (422)
16 TIGR01910 DapE-ArgE acetylorni 100.0 3E-39 6.6E-44 314.1 27.8 302 2-376 17-352 (375)
17 PRK13013 succinyl-diaminopimel 100.0 2E-38 4.3E-43 313.6 31.5 310 4-378 35-392 (427)
18 PRK13009 succinyl-diaminopimel 100.0 7.5E-38 1.6E-42 304.4 34.2 301 1-377 17-344 (375)
19 TIGR01883 PepT-like peptidase 100.0 2.7E-38 5.8E-43 306.0 29.7 291 1-376 15-334 (361)
20 PRK06837 acetylornithine deace 100.0 5.2E-38 1.1E-42 310.3 31.5 306 1-377 35-392 (427)
21 TIGR01246 dapE_proteo succinyl 100.0 2.2E-37 4.8E-42 300.6 33.8 300 1-377 14-341 (370)
22 COG1473 AbgB Metal-dependent a 100.0 3.3E-37 7.2E-42 295.3 33.7 310 1-379 27-355 (392)
23 PRK00466 acetyl-lysine deacety 100.0 2.8E-37 6.1E-42 297.1 29.0 274 1-378 25-313 (346)
24 PRK13381 peptidase T; Provisio 100.0 9E-37 2E-41 299.5 32.9 288 3-376 28-373 (404)
25 PRK13983 diaminopimelate amino 100.0 4.2E-37 9.1E-42 301.6 30.3 302 4-372 28-367 (400)
26 PRK06133 glutamate carboxypept 100.0 8.2E-37 1.8E-41 300.1 32.0 289 5-375 59-374 (410)
27 PRK08652 acetylornithine deace 100.0 8.1E-37 1.8E-41 294.0 29.0 284 1-377 17-314 (347)
28 PRK07473 carboxypeptidase; Pro 100.0 1.8E-36 3.9E-41 294.2 31.4 285 6-376 34-345 (376)
29 PRK07906 hypothetical protein; 100.0 7.2E-37 1.6E-41 302.3 28.1 312 3-376 22-388 (426)
30 PRK08651 succinyl-diaminopimel 100.0 2.1E-36 4.6E-41 296.1 29.4 296 3-376 26-359 (394)
31 TIGR01900 dapE-gram_pos succin 100.0 4.8E-36 1E-40 291.0 30.3 298 1-376 11-360 (373)
32 PRK07522 acetylornithine deace 100.0 4.8E-36 1E-40 292.7 28.3 295 2-373 20-350 (385)
33 PRK09133 hypothetical protein; 100.0 5E-36 1.1E-40 299.8 28.7 314 3-376 56-437 (472)
34 PRK05469 peptidase T; Provisio 100.0 2.1E-35 4.5E-40 290.2 32.1 288 3-376 29-375 (408)
35 TIGR01892 AcOrn-deacetyl acety 100.0 1.1E-35 2.4E-40 288.0 29.7 289 5-377 17-337 (364)
36 PRK13004 peptidase; Reviewed 100.0 1E-35 2.2E-40 291.6 28.4 295 1-376 30-364 (399)
37 PRK08596 acetylornithine deace 100.0 1.8E-35 3.9E-40 291.6 30.1 299 3-376 33-384 (421)
38 TIGR01880 Ac-peptdase-euk N-ac 100.0 1.1E-35 2.3E-40 291.7 28.0 307 4-377 29-365 (400)
39 TIGR03320 ygeY M20/DapE family 100.0 2E-35 4.2E-40 289.3 29.5 295 1-376 28-362 (395)
40 PRK06446 hypothetical protein; 100.0 1.7E-35 3.7E-40 293.0 29.2 304 6-371 25-395 (436)
41 TIGR01882 peptidase-T peptidas 100.0 1.2E-35 2.6E-40 291.8 27.3 286 3-375 31-376 (410)
42 PRK04443 acetyl-lysine deacety 100.0 1.9E-35 4.2E-40 284.5 28.1 280 1-376 21-317 (348)
43 PRK05111 acetylornithine deace 100.0 2.5E-35 5.4E-40 287.5 28.8 287 5-376 31-350 (383)
44 TIGR03526 selenium_YgeY putati 100.0 3.8E-35 8.2E-40 287.2 29.9 295 1-376 28-362 (395)
45 PRK08201 hypothetical protein; 100.0 7.3E-35 1.6E-39 290.3 29.8 315 3-376 37-421 (456)
46 PRK08262 hypothetical protein; 100.0 5.3E-35 1.2E-39 293.4 27.4 313 7-376 74-447 (486)
47 COG0624 ArgE Acetylornithine d 100.0 1.3E-34 2.7E-39 284.9 28.7 308 3-378 31-377 (409)
48 PRK13007 succinyl-diaminopimel 100.0 3E-34 6.6E-39 276.7 29.7 281 1-373 22-321 (352)
49 PRK09104 hypothetical protein; 100.0 9.5E-34 2.1E-38 282.8 30.1 313 5-374 42-428 (464)
50 PRK07907 hypothetical protein; 100.0 1.5E-33 3.3E-38 280.2 30.4 285 4-341 42-383 (449)
51 TIGR01902 dapE-lys-deAc N-acet 100.0 6.8E-34 1.5E-38 272.5 26.8 276 1-378 12-304 (336)
52 PRK08737 acetylornithine deace 100.0 3.1E-33 6.8E-38 270.1 28.5 279 4-376 28-333 (364)
53 PRK07079 hypothetical protein; 100.0 5.4E-33 1.2E-37 277.6 29.2 309 4-371 38-418 (469)
54 KOG2275 Aminoacylase ACY1 and 100.0 5.3E-33 1.1E-37 258.7 23.6 303 7-376 49-384 (420)
55 TIGR01886 dipeptidase dipeptid 100.0 5.5E-32 1.2E-36 269.5 31.3 328 3-371 42-429 (466)
56 PRK07318 dipeptidase PepV; Rev 100.0 1.1E-32 2.5E-37 275.0 25.7 327 4-368 44-426 (466)
57 TIGR01893 aa-his-dipept aminoa 100.0 8.3E-32 1.8E-36 269.4 29.3 300 1-377 19-447 (477)
58 PRK07205 hypothetical protein; 100.0 1.1E-30 2.4E-35 259.3 31.3 310 6-374 41-405 (444)
59 PRK06156 hypothetical protein; 100.0 2.1E-30 4.5E-35 261.4 30.5 335 6-378 75-482 (520)
60 PRK15026 aminoacyl-histidine d 100.0 8.1E-30 1.8E-34 253.7 29.3 294 1-379 25-455 (485)
61 TIGR01887 dipeptidaselike dipe 100.0 2.3E-29 5E-34 249.0 30.2 327 4-378 32-418 (447)
62 PRK08554 peptidase; Reviewed 100.0 1.1E-27 2.3E-32 236.7 23.5 300 5-376 26-406 (438)
63 KOG2276 Metalloexopeptidases [ 99.9 9.6E-24 2.1E-28 195.1 18.1 290 4-342 40-409 (473)
64 COG2195 PepD Di- and tripeptid 99.8 1.2E-19 2.6E-24 174.4 14.4 287 2-375 21-380 (414)
65 PF07687 M20_dimer: Peptidase 99.7 7.5E-17 1.6E-21 129.1 12.4 110 182-304 1-110 (111)
66 PRK10199 alkaline phosphatase 99.6 2.1E-14 4.5E-19 135.1 12.7 103 2-115 51-188 (346)
67 COG4187 RocB Arginine degradat 99.5 2.3E-13 4.9E-18 127.9 13.9 181 2-225 26-262 (553)
68 TIGR03106 trio_M42_hydro hydro 99.3 2.3E-11 5.1E-16 116.0 12.1 97 1-100 18-220 (343)
69 COG1363 FrvX Cellulase M and r 99.2 1.6E-10 3.4E-15 109.3 11.3 107 1-117 17-227 (355)
70 TIGR03107 glu_aminopep glutamy 99.1 3.3E-10 7.1E-15 108.2 11.2 109 1-118 13-226 (350)
71 PRK09961 exoaminopeptidase; Pr 99.1 3.5E-10 7.5E-15 108.3 11.4 107 1-118 15-214 (344)
72 PF01546 Peptidase_M20: Peptid 99.1 4.5E-10 9.7E-15 98.3 7.7 62 46-113 1-82 (189)
73 PRK09864 putative peptidase; P 99.0 2.8E-09 6E-14 101.7 12.0 103 1-117 15-220 (356)
74 KOG2194 Aminopeptidases of the 98.4 6E-07 1.3E-11 92.4 8.6 110 4-120 79-217 (834)
75 PF04389 Peptidase_M28: Peptid 98.3 8.5E-07 1.8E-11 77.0 6.2 63 44-113 2-71 (179)
76 PF05343 Peptidase_M42: M42 gl 98.1 9.6E-06 2.1E-10 75.9 7.1 46 61-115 134-179 (292)
77 KOG3946 Glutaminyl cyclase [Po 97.7 0.00018 3.9E-09 64.9 7.9 113 2-116 68-201 (338)
78 COG2234 Iap Predicted aminopep 97.1 0.0012 2.5E-08 65.7 7.6 65 42-115 208-273 (435)
79 KOG2195 Transferrin receptor a 96.9 0.0039 8.4E-08 64.7 8.4 79 27-113 337-418 (702)
80 PF05450 Nicastrin: Nicastrin; 93.5 0.29 6.3E-06 44.3 7.4 65 43-113 1-72 (234)
81 COG4882 Predicted aminopeptida 90.2 3.2 7E-05 39.5 10.2 159 42-228 189-359 (486)
82 TIGR01893 aa-his-dipept aminoa 88.5 1 2.2E-05 45.4 6.3 45 250-301 336-380 (477)
83 KOG2526 Predicted aminopeptida 86.6 4.6 9.9E-05 39.4 8.9 98 10-112 165-285 (555)
84 PF00883 Peptidase_M17: Cytoso 84.6 7.3 0.00016 36.7 9.2 91 6-100 18-142 (311)
85 cd00433 Peptidase_M17 Cytosol 79.9 22 0.00048 35.7 11.2 90 6-100 174-297 (468)
86 PTZ00412 leucyl aminopeptidase 75.7 25 0.00055 35.8 10.1 33 64-100 324-356 (569)
87 PRK00913 multifunctional amino 75.1 31 0.00068 34.8 10.7 89 7-100 192-311 (483)
88 TIGR03107 glu_aminopep glutamy 74.7 4.3 9.2E-05 39.1 4.4 92 265-378 220-314 (350)
89 PRK02256 putative aminopeptida 66.2 9.8 0.00021 38.1 4.9 38 58-101 257-294 (462)
90 KOG2597 Predicted aminopeptida 62.8 49 0.0011 33.4 8.9 89 7-100 210-332 (513)
91 PF01546 Peptidase_M20: Peptid 61.4 9.3 0.0002 32.6 3.4 38 321-365 109-146 (189)
92 PRK09961 exoaminopeptidase; Pr 60.6 11 0.00024 36.2 4.1 50 320-377 252-305 (344)
93 PRK09864 putative peptidase; P 56.8 19 0.00042 34.8 5.0 52 320-378 260-314 (356)
94 PRK05015 aminopeptidase B; Pro 56.6 1.2E+02 0.0026 30.0 10.3 33 64-100 216-248 (424)
95 PRK15026 aminoacyl-histidine d 55.0 33 0.00073 34.6 6.6 42 252-300 344-385 (485)
96 TIGR03406 FeS_long_SufT probab 53.1 1.2E+02 0.0027 26.0 8.8 29 272-300 114-142 (174)
97 TIGR03106 trio_M42_hydro hydro 51.6 24 0.00052 33.9 4.7 50 322-378 264-316 (343)
98 PF05343 Peptidase_M42: M42 gl 51.0 16 0.00035 34.2 3.4 50 322-378 221-273 (292)
99 COG0260 PepB Leucyl aminopepti 50.6 1.1E+02 0.0024 30.9 9.2 33 64-100 278-310 (485)
100 PF09940 DUF2172: Domain of un 42.7 79 0.0017 30.7 6.5 54 35-96 124-177 (386)
101 cd06406 PB1_P67 A PB1 domain i 40.5 59 0.0013 24.0 4.2 28 272-299 8-35 (80)
102 PF04114 Gaa1: Gaa1-like, GPI 37.8 1.2E+02 0.0026 30.8 7.5 64 30-99 5-69 (504)
103 COG1363 FrvX Cellulase M and r 36.3 48 0.001 32.0 4.1 50 322-378 267-319 (355)
104 KOG3566 Glycosylphosphatidylin 33.8 2.1E+02 0.0046 29.4 8.2 81 9-97 91-183 (617)
105 PF03755 YicC_N: YicC-like fam 33.6 2.3E+02 0.0049 23.8 7.4 65 274-340 30-97 (159)
106 PF09650 PHA_gran_rgn: Putativ 32.8 87 0.0019 23.5 4.2 35 278-312 2-36 (87)
107 PRK06156 hypothetical protein; 32.1 2.2E+02 0.0047 29.0 8.4 25 253-278 240-264 (520)
108 cd04870 ACT_PSP_1 CT domains f 31.3 1.9E+02 0.0042 20.5 5.8 37 271-311 37-73 (75)
109 TIGR02159 PA_CoA_Oxy4 phenylac 31.0 2.5E+02 0.0054 23.4 7.0 33 268-300 22-54 (146)
110 PTZ00371 aspartyl aminopeptida 30.6 61 0.0013 32.6 3.9 51 57-114 247-298 (465)
111 PF05411 Peptidase_C32: Equine 29.6 1E+02 0.0022 24.8 4.1 48 10-57 49-108 (127)
112 TIGR02701 shell_carb_anhy carb 29.0 46 0.001 32.4 2.6 51 42-100 361-411 (450)
113 TIGR03350 type_VI_ompA type VI 25.9 1.9E+02 0.0041 23.4 5.5 53 43-98 61-116 (137)
114 cd04871 ACT_PSP_2 ACT domains 25.4 1.6E+02 0.0034 21.7 4.5 38 270-312 46-83 (84)
115 PRK02813 putative aminopeptida 24.7 1.8E+02 0.0038 29.0 6.0 52 2-54 18-88 (428)
116 TIGR02610 PHA_gran_rgn putativ 23.0 1.9E+02 0.0041 21.9 4.5 36 276-311 3-38 (91)
117 PRK06667 motB flagellar motor 22.6 3E+02 0.0064 25.1 6.7 54 43-98 160-217 (252)
118 cd04869 ACT_GcvR_2 ACT domains 22.5 2.5E+02 0.0054 19.9 5.2 38 270-311 42-79 (81)
119 PRK02813 putative aminopeptida 22.4 89 0.0019 31.1 3.4 37 58-101 231-267 (428)
120 cd06408 PB1_NoxR The PB1 domai 22.4 3.4E+02 0.0073 20.4 5.7 54 277-335 14-69 (86)
121 cd06411 PB1_p51 The PB1 domain 20.8 1.6E+02 0.0036 21.6 3.6 32 272-303 4-35 (78)
122 COG4310 Uncharacterized protei 20.7 3.4E+02 0.0074 25.8 6.5 74 15-96 147-226 (435)
123 PF06675 DUF1177: Protein of u 20.0 5.2E+02 0.011 23.7 7.3 66 31-98 15-92 (276)
No 1
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=4.2e-55 Score=428.10 Aligned_cols=346 Identities=31% Similarity=0.472 Sum_probs=304.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~ 80 (381)
+|+.+.++++||.+||+++|+++++|..||++++++|..++.|+|++.+||||||.||.+|++.|+++.|+|++.|++++
T Consensus 28 ~s~~~~~a~~~~~~~~~~~Gl~v~~D~~gN~~~~~~g~~~~~~~i~~gsHlDtv~~gG~~dg~~Gv~~~le~~~~l~~~~ 107 (406)
T TIGR03176 28 YSPEWLAAQQQFKKRMAESGLETRFDDVGNLYGRLVGTEFPEETILTGSHIDTVVNGGNLDGQFGALAAWLAVDYLKEKY 107 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEecCCCCCCCeEEEeccccCCCCCCccCchhhHHHHHHHHHHHHHcC
Confidence 58999999999999999999999999999999999998777899999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccc-cccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchh
Q 016853 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSA-LRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (381)
Q Consensus 81 ~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~-~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~ 159 (381)
+ .++++|.++++.+||.++||++++||+.+.+.+.... +...|.+|+++.++|.+.|++.+... ...+.+.+
T Consensus 108 ~--~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~-----~~~~~~~~ 180 (406)
T TIGR03176 108 G--APLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRKAP-----TVRDDIKA 180 (406)
T ss_pred C--CCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCccccc-----ccccccce
Confidence 7 8999999999999999999999999999998665544 56789999999999999999765211 11236889
Q ss_pred eeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 016853 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (381)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (381)
|+|+|+|||++++..+.+.|++++.+|..+++|+|+|+++|+|.+|+..+.||+.++++++.++.++..+.
T Consensus 181 ~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~~~~--------- 251 (406)
T TIGR03176 181 FVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIERAKEI--------- 251 (406)
T ss_pred EEEEEECCCcchHHCCCeEEEEeecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---------
Confidence 99999999999999999999999999999999999999999998674346999999999999998875421
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC
Q 016853 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (381)
Q Consensus 240 ~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~ 319 (381)
. .+.++|++.|+++|++.|+||++|++++|+|.++.++.+.+.++|++.+++++..++++++++.....++
T Consensus 252 --------~-~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~~~~~~p 322 (406)
T TIGR03176 252 --------G-DPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMKAIADEMDITIDIDLWMDEAP 322 (406)
T ss_pred --------C-CCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCC
Confidence 1 2468999999964799999999999999999999999999999999999999888899888876444456
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 379 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~~ 379 (381)
...++++++.+.+++++..+. +..+++++++|+++|++.+|++++|+|+.++
T Consensus 323 ~~~d~~lv~~l~~a~~~~~~~--------~~~~~sggg~Da~~~~~~vP~~~ifgp~~~g 374 (406)
T TIGR03176 323 VPMNKEIVAIIEQLAKAEKLN--------YRLMHSGAGHDAQIFAPRVPTAMIFVPSIGG 374 (406)
T ss_pred CCCCHHHHHHHHHHHHHcCCC--------ceecCcccHHHHHHHHHHCCEEEEEEeCCCC
Confidence 667889999999999886432 3344678999999999999999999998654
No 2
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.2e-52 Score=427.28 Aligned_cols=347 Identities=36% Similarity=0.589 Sum_probs=304.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCC-EEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhc
Q 016853 1 MSPASVRAGNLIRQWMEDAGL-RTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST 79 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~-~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~ 79 (381)
+|+.+.++++||.+||+++|+ ++++|..||++++++|..++.|+|++.+||||||.+|.+|+++|++++|+++++|++.
T Consensus 209 ~s~~~~~~~~~l~~~~~~~Gl~~v~~D~~GNl~~~~~g~~~~~~~v~~gsHlDTV~~gG~~DG~~Gv~a~lea~~~l~~~ 288 (591)
T PRK13590 209 LTDAHRACAQQISHWMRDCGFDEVHIDAVGNVVGRYKGSTPQAKRLLTGSHYDTVRNGGKYDGRLGIFVPMACVRELHRQ 288 (591)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCeeeECCCCCEEEEecCCCCCCCeEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHc
Confidence 588899999999999999999 9999999999999998766669999999999999999999999999999999999999
Q ss_pred CCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchh
Q 016853 80 GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (381)
Q Consensus 80 ~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~ 159 (381)
++ .++++|.++++.+||..+||++++||+.+.+.+....+...|.+|+++.++|.+.|++.+. +.+....++.+.+
T Consensus 289 ~~--~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~--~~~~~~~~~~~~a 364 (591)
T PRK13590 289 GR--RLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFDPAWLDQKDADGITMREAMQHAGLCIDD--IPKLRRDPARYLG 364 (591)
T ss_pred CC--CCCCCeEEEEecCCccccCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhh--ccccccCCCCccE
Confidence 98 7889999999999999999999999999988655555666799999999999999986541 2222334567899
Q ss_pred eeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 016853 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (381)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (381)
|+|+|+|||++++..+.+.+++++.+|..+++|+|+|+++|+|..|+..+.||+..+++++..++++...
T Consensus 365 ~~ElHiEqg~~Le~~~~~~gvV~~~~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~---------- 434 (591)
T PRK13590 365 FVEVHIEQGPVLNELDLPLGIVTSINGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ---------- 434 (591)
T ss_pred EEEEEeCCCHHHHHCCCceEEEeeeeccEEEEEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----------
Confidence 9999999999999999999999999999999999999999999878645899999999999999886431
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC
Q 016853 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (381)
Q Consensus 240 ~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~ 319 (381)
+ ..+++|++.|++.|++.|+||++|++++|+|..+.++.+.+.+.|++.+++++..++++++++.....++
T Consensus 435 -------~--~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~~i~~~i~~ia~~~g~~vei~~~~~~~~ 505 (591)
T PRK13590 435 -------D--GDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVADVLAELEAICERRGLRYTLEETMRAAA 505 (591)
T ss_pred -------C--CCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCC
Confidence 1 1347799999864679999999999999999999999999999999999999888899988887667778
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
+.+++++++.+.+++++. |.. +..+++++++|+++|++.+|.+++|+|+..
T Consensus 506 ~~~d~~lv~~~~~aa~~~-G~~-------~~~~~sggg~Da~~~a~~~p~~mifgpg~~ 556 (591)
T PRK13590 506 APSAPAWQQRWEAAVAAL-GLP-------LFRMPSGAGHDAMKLHEIMPQAMLFVRGEN 556 (591)
T ss_pred cCCCHHHHHHHHHHHHHc-CCC-------cccCCcchhHHHHHHHHHCCEEEEEEeeCC
Confidence 889999999999999873 432 334567899999999999999999999864
No 3
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=2e-52 Score=425.12 Aligned_cols=349 Identities=38% Similarity=0.618 Sum_probs=306.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhc
Q 016853 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST 79 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~ 79 (381)
+|+.+.++++||.+||+++|++ +++|+.||++++++|.+++.|+|++.+|+||||.+|.+|+-+|++++|+++++|++.
T Consensus 209 ~s~~~~~~~~~~~~~~~~~Gl~~v~~D~~gNv~~~~~g~~~~~p~v~~gSHlDTV~~gG~~DG~~Gv~a~l~~~~~l~~~ 288 (591)
T PRK13799 209 LSDAHRACANQISDWMRDAGFDEVEIDAVGNVVGRYKAADDDAKTLITGSHYDTVRNGGKYDGREGIFLAIACVKELHEQ 288 (591)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCeEeECCCCCEEEEcCCCCCCCCeEEEeccccccCCCCccccHHHHHHHHHHHHHHHHc
Confidence 5889999999999999999998 999999999999998766789999999999999999999999999999999999999
Q ss_pred CCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchh
Q 016853 80 GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (381)
Q Consensus 80 ~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~ 159 (381)
++ +++++|.++.+.+||..+||++++||+.+.+.+....+...|.+|+++.+++.+.|++.+. ..+....++.+.+
T Consensus 289 ~~--~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~--~~~~~~~~~~~~a 364 (591)
T PRK13799 289 GE--RLPFHFEVIAFAEEEGQRFKATFLGSGALIGDFNMELLDIKDADGISLREAIQHAGHCIDA--IPKIARDPADVLG 364 (591)
T ss_pred CC--CCCCCeEEEEecCCCccCCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhh--ccccccCCCCccE
Confidence 98 8999999999999999999999999999998666666667799999999999998886542 1111222356889
Q ss_pred eeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 016853 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (381)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (381)
|+|+|+|||++|+..+.+.|++++.+|..+++|+|+|+++|+|..|++.+.||+.++++++.+++++..+.
T Consensus 365 ~~ElHIEQgp~Le~~~~~igvV~g~~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--------- 435 (591)
T PRK13799 365 FIEVHIEQGPVLLELDIPLGIVTSIAGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--------- 435 (591)
T ss_pred EEEEEeCCCHHHHHCCCcEEEEeeeccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc---------
Confidence 99999999999999999999999999999999999999999998786568999999999999999875421
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC
Q 016853 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (381)
Q Consensus 240 ~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~ 319 (381)
|. ...++|++.|++.+++.|+||++|++.+|+|.++.++.+.+.++|++.++.++..++++++++.....++
T Consensus 436 -------~~-~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l~~~i~~~i~~ia~~~g~~~ei~~~~~~~~ 507 (591)
T PRK13799 436 -------QH-ASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAAVADILAEIAAIAARRGIEYKAELAMKAAA 507 (591)
T ss_pred -------CC-CCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEEecCCC
Confidence 21 2357899999974468999999999999999999999999999999999999888898888877767788
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
+.+++++++.+.+++++ .|. .+..+++++++|+++|++..|.+++|+|+++
T Consensus 508 ~~~d~~lv~~~~~a~~~-~G~-------~~~~~~sgag~Da~~~a~~~p~amif~~~g~ 558 (591)
T PRK13799 508 APCAPELMKQLEAATDA-AGV-------PLFELASGAGHDAMKIAEIMDQAMLFTRCGN 558 (591)
T ss_pred cCCCHHHHHHHHHHHHH-cCC-------CceecCcchHHHHHHHHhhCCEEEEEEecCC
Confidence 88999999999988875 343 2334567899999999999999999999865
No 4
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.8e-52 Score=409.23 Aligned_cols=345 Identities=30% Similarity=0.475 Sum_probs=296.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~ 80 (381)
+|++|.++++||.++|+++||+++++..+|++++++|..+++|+|+|+|||||||.+|..|||+|++++|+|+++|++.+
T Consensus 35 ~~~~e~~~~~~l~~~l~~~G~~v~~~~~gNl~a~~~g~~~~~~~l~~~~H~DtVp~gg~~D~k~Gv~a~l~a~~~l~~~~ 114 (414)
T PRK12891 35 LTDGDREARDLFVAWARDAGCTVRVDAMGNLFARRAGRDPDAAPVMTGSHADSQPTGGRYDGIYGVLGGLEVVRALNDAG 114 (414)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEecCCCCCCCeEEEEecccCCCCCccccchhhHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999886544699999999999999999999999999999999999999
Q ss_pred CCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCcccc-ccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchh
Q 016853 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (381)
Q Consensus 81 ~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~-~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~ 159 (381)
+ .++++|.+++++|||.++||.++.||+.+.+.+...++ ...|.+|+.+.+.+.+.|+..+...+ .....+
T Consensus 115 ~--~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~ 186 (414)
T PRK12891 115 I--ETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAEPVG------GYPVHA 186 (414)
T ss_pred C--CCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCcccccc------cCCCCE
Confidence 8 89999999999999999999999999998776555443 45688899999999998876443221 123457
Q ss_pred eeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 016853 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (381)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (381)
|+++|+|+|.+++..+...+++.+++|..+++|+++|+++|+|..|+..|.|||..+++++.+|+++..+.
T Consensus 187 ~~e~h~e~g~vle~~~~~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~~--------- 257 (414)
T PRK12891 187 AYELHIEQGAILERAGKTIGVVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGRRD--------- 257 (414)
T ss_pred EEEEEeCCCHHHHHCCCcEEEEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---------
Confidence 89999999999999988888999999999999999999999986684368999999999999999875421
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC
Q 016853 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (381)
Q Consensus 240 ~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~ 319 (381)
+ .+.++|++.|++++.+.|+||++|++.+|+|+.|.++.++++++|+++++.++..++++++++....+++
T Consensus 258 -------~--~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (414)
T PRK12891 258 -------A--PDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARIADETGLRADIEQIFGYAP 328 (414)
T ss_pred -------C--CCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEEecCCC
Confidence 1 2569999999993369999999999999999999999999999999999998877888888877667788
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 379 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~~ 379 (381)
+.+++++++.+.++++. .|.+ +...+++++||+.++...+|++++|+|+..+
T Consensus 329 ~~~d~~lv~~l~~a~~~-~G~~-------~~~~~~~ggtDa~~~~~giPt~~~~gp~~~~ 380 (414)
T PRK12891 329 APFAPGCIDAVRDAARA-LGLS-------HMDIVSGAGHDACFAARGAPTGMIFVPCVDG 380 (414)
T ss_pred cCCCHHHHHHHHHHHHH-cCCC-------ceecCCcchHHHHHHHhhCCEEEEEEcCCCC
Confidence 88899999999999865 4432 2233567999998887779999999988654
No 5
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=4e-51 Score=400.50 Aligned_cols=347 Identities=37% Similarity=0.589 Sum_probs=294.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~ 80 (381)
+|++|.++++||.++|+++||++++++.+|++++++|+.+++|+|+|+||+||||.+|.+|++.|++++|+|+++|++.+
T Consensus 26 ~~~~e~~~~~~l~~~~~~~G~~~~~~~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~gg~~dg~~gvaa~l~a~~~l~~~g 105 (401)
T TIGR01879 26 LSPEDREAQDLFKKRMRAAGLEVRFDEVGNLIGRKEGTEPPLEVVLSGSHIDTVVNGGNFDGQLGVLAGIEVVDALKEAY 105 (401)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEecCCcEEEEecCCCCCCCEEEEecccccCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 48899999999999999999999999999999999886544689999999999999999999999999999999999999
Q ss_pred CCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccc-cccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchh
Q 016853 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALR-VSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (381)
Q Consensus 81 ~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~-~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~ 159 (381)
+ .++++|.+++++|||.++|+++++|++.+.+.+....+. ..|.+|+++.+++.+.|.+. ..+. ...+..+.+
T Consensus 106 ~--~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~--~~~~--~~~~~~~~~ 179 (401)
T TIGR01879 106 V--VPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDL--PNQP--LRPRGDIKA 179 (401)
T ss_pred C--CCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCc--cccc--ccccccccE
Confidence 8 899999999999999988999999999998654443332 35677888899988877432 1111 112335678
Q ss_pred eeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 016853 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (381)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (381)
|+|+|+|+|++++..+...+++.+++|..+++|+++|+++|+|..|+..+.||+..+++++.+|+++..+.
T Consensus 180 ~~e~Hieqg~~l~~~g~~~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~~~~--------- 250 (401)
T TIGR01879 180 YVELHIEQGPVLESNGQPIGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKAKRM--------- 250 (401)
T ss_pred EEEEEEcCCcChhhCCCeEEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---------
Confidence 99999999999999999999999999999999999999999987674368999999999999999875431
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC
Q 016853 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (381)
Q Consensus 240 ~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~ 319 (381)
. .+.+.+++.|++++...|+||++|++.+|+|+.|+++.++++++|+++++.++..+++++++++...+++
T Consensus 251 -------~--~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
T TIGR01879 251 -------G--DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIERWMDEEP 321 (401)
T ss_pred -------C--CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEEeecCCC
Confidence 0 2357899999984578999999999999999999999999999999999988777888888877667788
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 379 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~~ 379 (381)
+.+++++++.+.+++++. |.. +...+++++||+++|++..|.+++|+|+..+
T Consensus 322 ~~~d~~lv~~l~~a~~~~-g~~-------~~~~~~~ggtDa~~~~~~~~~~v~fgPg~~~ 373 (401)
T TIGR01879 322 VPCSEELVAALTELCERL-GYN-------ARVMVSGAGHDAQILAPIVPIGMIFIPSING 373 (401)
T ss_pred cCCCHHHHHHHHHHHHHc-CCC-------ccccccchHHHHHHHHhhCCEEEEEecCCCC
Confidence 888999999999999864 432 2333567999999999887878899987643
No 6
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=9.9e-49 Score=385.33 Aligned_cols=344 Identities=37% Similarity=0.574 Sum_probs=288.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcCC
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGK 81 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~~ 81 (381)
|++|.++++||.++|+++||+++++..+|++++++|..+ +|+|+|+||+||||.+|-.|+|+|++++|+|+++|++.++
T Consensus 35 ~~~e~~~~~~l~~~l~~~G~~~~~~~~~nl~a~~~g~~~-~~~l~l~gH~DtVp~~g~~dg~~Gvaa~l~a~~~l~~~~~ 113 (412)
T PRK12892 35 SDAHVAARRRLAAWCEAAGLAVRIDGIGNVFGRLPGPGP-GPALLVGSHLDSQNLGGRYDGALGVVAGLEAARALNEHGI 113 (412)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEecCCCC-CCeEEEEccccCCCCCCcccchHHHHHHHHHHHHHHHcCC
Confidence 678999999999999999999999888999999988654 4899999999999999989999999999999999999987
Q ss_pred CCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccc-cccc-cCCCCcHHHHHHHCCCChhhhhhhhccCCCccchh
Q 016853 82 LGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSA-LRVS-DKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (381)
Q Consensus 82 ~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~-~~~~-d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~ 159 (381)
.++++|.+++++|||.++||.++.|++.+.+.+.... .... ..++..+.+.+.+.|+.++...+. +|....+
T Consensus 114 --~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~----ep~~~~~ 187 (412)
T PRK12892 114 --ATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALAARCRSDGVPLRDALAAAGLAGRPRPAA----DRARPKG 187 (412)
T ss_pred --CCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHhCccCCCCcCHHHHHHHcCCChhhcccc----cccCccE
Confidence 7899999999999999888877889999975433221 1111 224556777888888877654443 2455677
Q ss_pred eeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 016853 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (381)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (381)
++++|+++|.+++..+...+++++++|..+++|+++|+++|+|..|+..|.|||..+++++.+|+++..+.
T Consensus 188 ~~e~~~~~g~~~e~~~~~~~i~~~~kG~~~~~i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~l~~~~~~~--------- 258 (412)
T PRK12892 188 YLEAHIEQGPVLEQAGLPVGVVTGIVGIWQYRITVTGEAGHAGTTPMALRRDAGLAAAEMIAAIDEHFPRV--------- 258 (412)
T ss_pred EEEEEeccCHhHhhCCCcEEEEEEeccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---------
Confidence 88999999999988877778899999999999999999999987673368999999999999999865421
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC
Q 016853 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (381)
Q Consensus 240 ~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~ 319 (381)
..+++++++.|++++.+.|+||++|++++|+|++|.++.+++.++|++++++++..+++++++.....+++
T Consensus 259 ---------~~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~e~~~~~~~~~ 329 (412)
T PRK12892 259 ---------CGPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCREIARRRGCRVSVDRIAEYAP 329 (412)
T ss_pred ---------CCCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEEecCCC
Confidence 12469999999983479999999999999999999999999999999999998877888888776667788
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
+.+++++++.+.+++++ +|.+ +....++|+||+++|++.+|++++|+|+..
T Consensus 330 ~~~d~~lv~~~~~a~~~-~g~~-------~~~~~~~g~tDa~~~~~~ip~~~~~gp~~~ 380 (412)
T PRK12892 330 APCDAALVDALRAAAEA-AGGP-------YLEMPSGAGHDAQNMARIAPSAMLFVPSKG 380 (412)
T ss_pred cCCCHHHHHHHHHHHHH-cCCC-------ccccCcchHHHHHHHHhHCCEEEEEeccCC
Confidence 88889999999999988 5543 222345689999999888998888998754
No 7
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=5.4e-48 Score=380.11 Aligned_cols=348 Identities=39% Similarity=0.599 Sum_probs=288.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~ 80 (381)
.|++|.++++||.++|+++||+++++..+|++++++|..+++|+|+|+|||||||.+|..|||+|++++|+|+++|++.+
T Consensus 33 ~~~~e~~~~~~l~~~l~~~G~~~~~~~~~nlia~~~g~~~~~~~l~~~~H~DtVp~~g~~D~~~g~aa~l~a~~~l~~~~ 112 (414)
T PRK12890 33 LSDEERAARALLAAWMRAAGLEVRRDAAGNLFGRLPGRDPDLPPLMTGSHLDTVPNGGRYDGILGVLAGLEVVAALREAG 112 (414)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEcCCCcEEEEeCCCCCCCCEEEEeCcccCCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 37899999999999999999999988889999999876434689999999999999999999999999999999999988
Q ss_pred CCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCcccc-ccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchh
Q 016853 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (381)
Q Consensus 81 ~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~-~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~ 159 (381)
. .++++|.|++++|||.++||.++.|++.+.+.+....+ ...+.++..+.+.+.+.|...+...+ +...|..+.+
T Consensus 113 ~--~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~ep~~~~~ 188 (414)
T PRK12890 113 I--RPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGGDPDALPG--ALRPPGAVAA 188 (414)
T ss_pred C--CCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCCChhhccc--cccCCCCccE
Confidence 6 78999999999999998898889999988765553322 22244666677777777765542221 0123445667
Q ss_pred eeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 016853 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (381)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (381)
|+++|+++|.++...+...+++.+++|..+++|+++|+++|+|..|++.+.|||..+++++.+|+++..+.
T Consensus 189 ~~~~h~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~~l~~~~~~~--------- 259 (414)
T PRK12890 189 FLELHIEQGPVLEAEGLPIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELVTAMERRARAL--------- 259 (414)
T ss_pred EEEEeeCcCHHHHhCCCceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHHHHHHHHHHhc---------
Confidence 88899999998888777778888999999999999999999986573356899999999999999876431
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC
Q 016853 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (381)
Q Consensus 240 ~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~ 319 (381)
+ .+.+++++.|++++.+.|+||++|++++|+|++|.++.++++++|++++++.+..++++++++....+++
T Consensus 260 -------~--~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (414)
T PRK12890 260 -------L--HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAELEAIAAARGVRIELERLSRSEP 330 (414)
T ss_pred -------C--CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeecCCC
Confidence 1 2568899999984589999999999999999999999999999999999988877788888876667788
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
+.+++++++.+.+++++. |.. +...+++|+||+++|++..|.+++|+|...
T Consensus 331 ~~~~~~l~~~l~~~~~~~-g~~-------~~~~~~~g~tDa~~~~~~gp~~~~~gp~~~ 381 (414)
T PRK12890 331 VPCDPALVDAVEAAAARL-GYP-------SRRMPSGAGHDAAAIARIGPSAMIFVPCRG 381 (414)
T ss_pred cCCCHHHHHHHHHHHHHc-CCC-------ceecCCcccHHHHHHHhhCCEEEEEecCCC
Confidence 888999999999999774 543 222345689999999988888888888654
No 8
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.1e-46 Score=370.64 Aligned_cols=348 Identities=39% Similarity=0.629 Sum_probs=278.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~ 80 (381)
.|++|.++++||+++|+++||+++++..+|++++++|..+++|+|+|+|||||||.+|..|||+|+|++|+|+++|++.+
T Consensus 32 ~s~~e~~~a~~l~~~l~~~g~~~~~~~~~nl~a~~~g~~~~~~~l~l~gH~DtVp~~g~~d~k~g~aa~l~a~~~l~~~~ 111 (413)
T PRK09290 32 LSPEDLQARDLFAEWMEAAGLTVRVDAVGNLFGRLEGRDPDAPAVLTGSHLDTVPNGGRFDGPLGVLAGLEAVRTLNERG 111 (413)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEecCCCCCCCEEEEecCccCCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 37889999999999999999999988889999999764323589999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCcccc-ccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchh
Q 016853 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (381)
Q Consensus 81 ~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~-~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~ 159 (381)
. .++++|.+++++|||.++||++..|++.+...+.++.+ ...|.++..+.+.+.+.|++.+...+. .-+|..+.+
T Consensus 112 ~--~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~--~~ept~~~~ 187 (413)
T PRK09290 112 I--RPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDALALRDADGVSFAEALAAIGYDGDEAVGA--ARARRDIKA 187 (413)
T ss_pred C--CCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHHHhccCCCCCCHHHHHHHcCCChhhcccc--ccCCCCccE
Confidence 6 78899999999999998788788899988754332211 112445555666666666655421110 002344455
Q ss_pred eeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 016853 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (381)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (381)
++..|++.+.++++.+....++.++||..+++|+++|+++|+|..|.+.|.|||..+++++.+|+.+..+.
T Consensus 188 ~~~~~~~~~~~~e~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~--------- 258 (413)
T PRK09290 188 FVELHIEQGPVLEAEGLPIGVVTGIVGQRRYRVTFTGEANHAGTTPMALRRDALLAAAEIILAVERIAAAH--------- 258 (413)
T ss_pred EEEEEeccCHHHHHCCCcEEEEeeeeccEEEEEEEEEECCCCCCCCchhccCHHHHHHHHHHHHHHHHHhc---------
Confidence 66678887877777776666888999999999999999999885473378999999999999998875421
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC
Q 016853 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (381)
Q Consensus 240 ~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~ 319 (381)
+ ...+++++.+++++.+.|+||++|++.+|+|++|.++.++++++|++++++.+..++++++++....+++
T Consensus 259 -------~--~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~~~~~~~~~~~~~~e~~~~~~~~~ 329 (413)
T PRK09290 259 -------G--PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRAAAEAIAARRGVEVEIELISRRPP 329 (413)
T ss_pred -------C--CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCC
Confidence 1 2468899999974579999999999999999999999999999999999988777788888776666788
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
+.+++++++.+.+++++. |.. +....++|+||+++|+..+|++++|+|...
T Consensus 330 ~~~d~~lv~~l~~a~~~~-g~~-------~~~~~~~g~tDa~~~~~~iP~~~~~gp~~~ 380 (413)
T PRK09290 330 VPFDPGLVAALEEAAERL-GLS-------YRRLPSGAGHDAQILAAVVPTAMIFVPSVG 380 (413)
T ss_pred ccCCHHHHHHHHHHHHHc-CCC-------ccccCCccchHHHHHhccCCEEEEEeccCC
Confidence 888899999999999765 532 222245688999999877999888888654
No 9
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.8e-46 Score=369.30 Aligned_cols=343 Identities=39% Similarity=0.617 Sum_probs=278.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcCC
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGK 81 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~~ 81 (381)
|++|.++++||.++|+++||+++++..+|++++++|..+++|+|+|+||+||||.+|.+|+|+|++++|.|+++|++.+.
T Consensus 36 s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~~a~~~g~~~~~~~l~l~~H~DtVp~~g~~dgk~gvaa~l~a~~~l~~~~~ 115 (412)
T PRK12893 36 TDEDREARDLLAQWMEEAGLTVSVDAIGNLFGRRAGTDPDAPPVLIGSHLDTQPTGGRFDGALGVLAALEVVRTLNDAGI 115 (412)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEeCCCCCCCCEEEEEecccCCCCCCcccchhhHHHHHHHHHHHHHcCC
Confidence 78899999999999999999999888889999998754335899999999999999999999999999999999999886
Q ss_pred CCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccc-cccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchhe
Q 016853 82 LGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALR-VSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGY 160 (381)
Q Consensus 82 ~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~-~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~ 160 (381)
.++++|.|+|++|||.++|+.++.|++++.+...+..+. ..+.+++.+.+.+.+.++.++... -++.+.++
T Consensus 116 --~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 187 (412)
T PRK12893 116 --RTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDALARRDADGITLGEALARIGYRGTARV------GRRAVDAY 187 (412)
T ss_pred --CCCCCeEEEEEccccccccccccccHHHHhCcCChHHHHhccCCCCCCHHHHHHHcCCCccccc------ccCCccEE
Confidence 789999999999999987777789999887543322111 123345555555555554322100 12335667
Q ss_pred eeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCC
Q 016853 161 IEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRS 240 (381)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~ 240 (381)
+++|+++|.+++..+....++.+++|..+++|+++|+++|+|..|++.|.|||..+++++.+|+++..+.
T Consensus 188 ~~~~~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~G~~aHas~~p~~~G~NAI~~a~~~i~~l~~~~~~~---------- 257 (412)
T PRK12893 188 LELHIEQGPVLEAEGLPIGVVTGIQGIRWLEVTVEGQAAHAGTTPMAMRRDALVAAARIILAVERIAAAL---------- 257 (412)
T ss_pred EEEEeccCHHHHHCCCcEEEEeeecccEEEEEEEEEECCCcCCCcchhccCHHHHHHHHHHHHHHHHHhc----------
Confidence 8899999888877776777888999999999999999999986572279999999999999999876431
Q ss_pred CCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCc
Q 016853 241 NCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV 320 (381)
Q Consensus 241 ~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~ 320 (381)
. ...+++++.|++++.+.|+||++|++++|+|++|+++.++++++|++++++.+..++++++++....++++
T Consensus 258 ------~--~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~ 329 (412)
T PRK12893 258 ------A--PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAKIAAARGVQVTVETVWDFPPV 329 (412)
T ss_pred ------C--CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCCc
Confidence 1 24689999999845799999999999999999999999999999999999887778888887665567788
Q ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 321 MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 321 ~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
.+++++++.+.+++++. |.+ +...+++|+||+++|++.+|++++|+|...
T Consensus 330 ~~d~~l~~~l~~~~~~~-g~~-------~~~~~~~g~tD~~~~~~~~p~~v~~gp~~~ 379 (412)
T PRK12893 330 PFDPALVALVEAAAEAL-GLS-------HMRMVSGAGHDAMFLARVAPAAMIFVPCRG 379 (412)
T ss_pred CCCHHHHHHHHHHHHHc-CCC-------ccccCCccHHHHHHHHhhCCEEEEEeecCC
Confidence 88899999999988764 533 222345689999999988998888988743
No 10
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=1e-39 Score=315.97 Aligned_cols=310 Identities=20% Similarity=0.240 Sum_probs=235.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE--cCCCCEEEEecCCCCCCCeEEEeecccCCcCCC---------------CCcCh
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWV--DHLGNVHGRVEGLNASAQALLIGSHLDTVVDAG---------------IFDGS 63 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~--~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g---------------~~D~k 63 (381)
+|++|.++++||.++|+++|++++. ....|+++++++..+ +|+|+|+|||||||.++ +.+.+
T Consensus 14 ~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~-~~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~~ 92 (363)
T TIGR01891 14 LSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKP-GPVVALRADMDALPIQEQTDLPYKSTNPGVMHACGHD 92 (363)
T ss_pred CCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCC-CCEEEEEeccCCCCcccccCCCcccCCCCceecCcCH
Confidence 4789999999999999999999875 234689999966433 58999999999999531 01235
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChh
Q 016853 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (381)
Q Consensus 64 ~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~ 143 (381)
++++++|+|+++|++.+. .++++|.++|++|||.+ .|++.+... ..++
T Consensus 93 ~~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~~------~G~~~~~~~---~~~~--------------------- 140 (363)
T TIGR01891 93 LHTAILLGTAKLLKKLAD--LLEGTVRLIFQPAEEGG------GGATKMIED---GVLD--------------------- 140 (363)
T ss_pred HHHHHHHHHHHHHHhchh--hCCceEEEEEeecCcCc------chHHHHHHC---CCCC---------------------
Confidence 788899999999988764 67899999999999984 488877520 0000
Q ss_pred hhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 016853 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (381)
Q Consensus 144 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l 223 (381)
+.|.++ ..+.+++....... .....+++|..+++|+++|+++|++. | +.|.||+..|++++.++
T Consensus 141 ---------~~d~~i---~~e~~~~~~~~~~~--~~~~~~~~g~~~~~i~~~G~~~Has~-p-~~g~nAi~~~~~~i~~l 204 (363)
T TIGR01891 141 ---------DVDAIL---GLHPDPSIPAGTVG--LRPGTIMAAADKFEVTIHGKGAHAAR-P-HLGRDALDAAAQLVVAL 204 (363)
T ss_pred ---------CcCEEE---EECCCCCCCCeEEE--ECCCcceeecceEEEEEEeecccccC-c-ccccCHHHHHHHHHHHH
Confidence 011111 11221110000000 00112468999999999999999976 9 69999999999999999
Q ss_pred HHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHH
Q 016853 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~ 303 (381)
+++..+.. ++. ...++|++.|++ |.+.|+||++|++.+|+|..|.++.+++.++|++++++.+.
T Consensus 205 ~~~~~~~~--------------~~~-~~~~~~i~~i~g-G~~~nvvP~~~~~~~diR~~~~~~~e~~~~~i~~~~~~~~~ 268 (363)
T TIGR01891 205 QQIVSRNV--------------DPS-RPAVVTVGIIEA-GGAPNVIPDKASMSGTVRSLDPEVRDQIIDRIERIVEGAAA 268 (363)
T ss_pred HHHhhccC--------------CCC-CCcEEEEEEEEc-CCCCcEECCeeEEEEEEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 98653211 121 256899999999 78999999999999999999999999999999999999887
Q ss_pred HcCceEEEEEeccCCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCCC
Q 016853 304 KRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 379 (381)
Q Consensus 304 ~~~~~v~~~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~~ 379 (381)
..++++++++...+|+...++++++.+++++++.+|..+ .......++|+||+++|++.+|++++|+|+.++
T Consensus 269 ~~~~~ve~~~~~~~p~~~~~~~l~~~l~~a~~~~~g~~~----~~~~~~~~~gg~Da~~~~~~~P~~~~f~~~~~~ 340 (363)
T TIGR01891 269 MYGAKVELNYDRGLPAVTNDPALTQILKEVARHVVGPEN----VAEDPEVTMGSEDFAYYSQKVPGAFFFLGIGNE 340 (363)
T ss_pred HhCCeEEEEEecCCCCccCCHHHHHHHHHHHHHhcCccc----eeccCCCCccccCHHHHHHhCCeeEEEEecCCC
Confidence 778888888766667766788999999999999876431 111112367999999999999999999999975
No 11
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=1.7e-39 Score=320.02 Aligned_cols=304 Identities=18% Similarity=0.263 Sum_probs=235.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE-cCCCCEEEEecCCCCCCCeEEEeecccCCcCC------------C---CCcChH
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWV-DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------G---IFDGSL 64 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~-~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------g---~~D~k~ 64 (381)
+|++|.++++||.++|+++||+++. ....|+++++ |.+ ++|+|+|.|||||||.. | ++|+|+
T Consensus 62 ~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~-g~~-~g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg 139 (437)
T PLN02693 62 LGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYI-GTG-EPPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDG 139 (437)
T ss_pred CCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEE-CCC-CCCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchH
Confidence 5899999999999999999999764 3456899998 433 25899999999999953 1 468999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhh
Q 016853 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (381)
Q Consensus 65 giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~ 144 (381)
+++++|.|+++|++.+. .++++|.++|++|||.+ .|++.++. .|.
T Consensus 140 ~~A~~l~Aa~~L~~~~~--~~~g~V~~if~pdEE~~------~Ga~~~i~-----------------------~g~---- 184 (437)
T PLN02693 140 HVAMLLGAAKILQEHRH--HLQGTVVLIFQPAEEGL------SGAKKMRE-----------------------EGA---- 184 (437)
T ss_pred HHHHHHHHHHHHHhCcc--cCCceEEEEEEEcccch------hhHHHHHH-----------------------CCC----
Confidence 99999999999998874 57899999999999953 38887651 110
Q ss_pred hhhhhccCC-CccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 016853 145 ESLLQLKYD-PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (381)
Q Consensus 145 ~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l 223 (381)
++ .+.+++ .|.++....+......|.+ .+|..+++|+++|+++|+|. | +.|+|||..+++++.+|
T Consensus 185 -------~~~~~~iig---~h~~p~~~~g~~~~~~g~~--~~G~~~~~i~v~Gk~aHaa~-P-~~G~nAI~~aa~~i~~l 250 (437)
T PLN02693 185 -------LKNVEAIFG---IHLSPRTPFGKAASRAGSF--MAGAGVFEAVITGKGGHAAI-P-QHTIDPVVAASSIVLSL 250 (437)
T ss_pred -------CCCCCEEEE---EecCCCCCCeeEEeccCcc--cccceEEEEEEEcccccCCC-C-CCCcCHHHHHHHHHHHH
Confidence 01 122222 4655432111110111111 57899999999999999997 9 79999999999999999
Q ss_pred HHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHH
Q 016853 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~ 303 (381)
+++..+.. +|. .+.++|++.|+| |.+.|+||++|++++|+|+.+.. +.++++|++++++++.
T Consensus 251 ~~~~~~~~--------------~~~-~~~ti~vg~i~G-G~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~ 312 (437)
T PLN02693 251 QQLVSRET--------------DPL-DSKVVTVSKVNG-GNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAA 312 (437)
T ss_pred HHHhcccC--------------CCC-CCcEEEEEEEEc-CCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHH
Confidence 98854321 243 467999999999 89999999999999999999974 5899999999999887
Q ss_pred HcCceEEEEEec----cCCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 304 KRSVSCIVERKH----DANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 304 ~~~~~v~~~~~~----~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
.+++++++++.. .++++.+++++++.+.+++++++|.++ .....+.+|++|+++|++.+|.+++++|..+
T Consensus 313 ~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~-----~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~ 386 (437)
T PLN02693 313 VHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLLGQEA-----FVEAAPEMGSEDFSYFAETIPGHFSLLGMQD 386 (437)
T ss_pred HhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhcCCcc-----eeecCCCceechHHHHHHHhhhhEEEEecCC
Confidence 788777776542 345677889999999999999877642 0111234589999999999999999998764
No 12
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.6e-39 Score=316.39 Aligned_cols=297 Identities=18% Similarity=0.248 Sum_probs=232.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCC----CCEEEEecCCCCCCCeEEEeecccCCcCC-------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHL----GNVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~----gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------- 57 (381)
+|++|.++++||.++|+++||+++.++. .|+++++ |.+ .|+|+|++||||||.+
T Consensus 17 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~-g~~--~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l 93 (377)
T PRK08588 17 VNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEI-GSG--SPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKL 93 (377)
T ss_pred CCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEe-CCC--CceEEEEeeecccCCCCcccCcCCCCCeEEECCEE
Confidence 4688999999999999999999876533 4899998 433 4899999999999963
Q ss_pred ---CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHH
Q 016853 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (381)
Q Consensus 58 ---g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~ 134 (381)
|..|||+|++++|+|+++|++.+. .++++|.|+|++|||.+ ..|++.++..
T Consensus 94 ~GrG~~D~Kgg~aa~l~a~~~l~~~~~--~~~~~i~l~~~~dEE~g-----~~G~~~~~~~------------------- 147 (377)
T PRK08588 94 YGRGATDMKSGLAALVIAMIELKEQGQ--LLNGTIRLLATAGEEVG-----ELGAKQLTEK------------------- 147 (377)
T ss_pred EecCcccccchHHHHHHHHHHHHHcCC--CCCCcEEEEEEcccccC-----chhHHHHHhc-------------------
Confidence 566999999999999999999886 78899999999999974 2588877521
Q ss_pred HHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHH
Q 016853 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (381)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~ 214 (381)
+. ..+.|.+ +..++ ....++.+++|..+++|+++|+++|+|. | +.|.|||.
T Consensus 148 ----~~----------~~~~d~~-----i~~ep--------~~~~i~~~~~G~~~~~i~~~G~~~Hss~-p-~~g~nAi~ 198 (377)
T PRK08588 148 ----GY----------ADDLDAL-----IIGEP--------SGHGIVYAHKGSMDYKVTSTGKAAHSSM-P-ELGVNAID 198 (377)
T ss_pred ----Cc----------cCCCCEE-----EEecC--------CCceeEEEEEEEEEEEEEEEeechhccC-C-ccccCHHH
Confidence 10 0011211 11122 1234677899999999999999999997 9 79999999
Q ss_pred HHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHH
Q 016853 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (381)
Q Consensus 215 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i 294 (381)
.+++++.+++++..+... .++..+.++++++.|+| |...|+||++|++++|+|+.|.++.+++.++|
T Consensus 199 ~~~~~l~~l~~~~~~~~~------------~~~~~~~~t~~v~~i~g-G~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i 265 (377)
T PRK08588 199 PLLEFYNEQKEYFDSIKK------------HNPYLGGLTHVVTIING-GEQVNSVPDEAELEFNIRTIPEYDNDQVISLL 265 (377)
T ss_pred HHHHHHHHHHHHhhhhcc------------cCccCCCCceeeeEEeC-CCcCCcCCCeEEEEEEeccCCCCCHHHHHHHH
Confidence 999999999887542110 01223467999999999 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCceEEEEEeccCCCcc--CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh---cCe
Q 016853 295 SNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKV 369 (381)
Q Consensus 295 ~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~---~p~ 369 (381)
++++++.+...++++++++...++++. .++++++.+.+++++++|.. +.....+|+||+++|+.. +|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~g~~-------~~~~~~~g~tD~~~~~~~~~~ip~ 338 (377)
T PRK08588 266 QEIINEVNQNGAAQLSLDIYSNHRPVASDKDSKLVQLAKDVAKSYVGQD-------IPLSAIPGATDASSFLKKKPDFPV 338 (377)
T ss_pred HHHHHHHhhccCCceEEEEecCCCCcCCCCCCHHHHHHHHHHHHhhCCC-------CceecCCCcccHHHHhhhcCCCCE
Confidence 999998776666777777766666654 45789999999999987753 222345688999999853 566
Q ss_pred EEEEEee
Q 016853 370 CSLLCRL 376 (381)
Q Consensus 370 ~~~~~~~ 376 (381)
+. |.|+
T Consensus 339 i~-~Gpg 344 (377)
T PRK08588 339 II-FGPG 344 (377)
T ss_pred EE-ECCC
Confidence 54 4454
No 13
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=1.5e-38 Score=315.32 Aligned_cols=307 Identities=17% Similarity=0.220 Sum_probs=235.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc-CCCCEEEEecCCCCCCCeEEEeecccCCcCCC---------------CCcChH
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVD-HLGNVHGRVEGLNASAQALLIGSHLDTVVDAG---------------IFDGSL 64 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~-~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g---------------~~D~k~ 64 (381)
++++|.++++||.++|+++|+++++. ...|+++++ |++. +|+|+|.|||||||.+. ++|+|+
T Consensus 112 ls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~-g~~~-~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~ 189 (478)
T PLN02280 112 LAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWI-GTGG-PPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDA 189 (478)
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEE-CCCC-CCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcH
Confidence 47899999999999999999998754 345899998 5432 48999999999999631 135678
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhh
Q 016853 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (381)
Q Consensus 65 giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~ 144 (381)
+++++|.|+++|++.+. +++++|.|+|++|||++ .|++.++. ...+ +
T Consensus 190 ~~A~~l~a~~~L~~~~~--~~~g~V~~if~pdEE~g------~Ga~~li~---~g~~-------------------~--- 236 (478)
T PLN02280 190 HVAMLLGAAKILKSREH--LLKGTVVLLFQPAEEAG------NGAKRMIG---DGAL-------------------D--- 236 (478)
T ss_pred HHHHHHHHHHHHHhccc--cCCceEEEEeccccccc------chHHHHHH---CCCC-------------------c---
Confidence 99999999999998875 68999999999999985 38888752 1000 0
Q ss_pred hhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 016853 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (381)
Q Consensus 145 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~ 224 (381)
+.|.+++ +|+.+..+....+...+. ..+|..+++|+++|+++|+|. | +.|.||+.++++++.+++
T Consensus 237 --------~~d~~~~---~h~~~~~p~g~ig~~~~~--~~~G~~~~~I~v~Gk~aHas~-P-~~G~NAI~~aa~li~~l~ 301 (478)
T PLN02280 237 --------DVEAIFA---VHVSHEHPTAVIGSRPGP--LLAGCGFFRAVISGKKGRAGS-P-HHSVDLILAASAAVISLQ 301 (478)
T ss_pred --------CCCEEEE---EecCCCCCCceeEecccc--cccceeEEEEEEECcchhcCC-c-ccCcCHHHHHHHHHHHHH
Confidence 1222333 465221110000111111 246999999999999999997 9 799999999999999999
Q ss_pred HHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHH
Q 016853 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 304 (381)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~ 304 (381)
.+..+.. +|. .+.+++++.|+| |.+.|+||++|++++|+|+.+.++.++++++|+++++.++..
T Consensus 302 ~l~~r~~--------------~~~-~~~tvnvg~I~G-G~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~ 365 (478)
T PLN02280 302 GIVSREA--------------NPL-DSQVVSVTTMDG-GNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGV 365 (478)
T ss_pred HHHhccc--------------CCC-CCcEEEEEEEEc-cCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8764321 233 367899999999 899999999999999999999999999999999999998877
Q ss_pred cCceEEEEEe----ccCCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 305 RSVSCIVERK----HDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 305 ~~~~v~~~~~----~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
+++++++++. ..++++.+++.+++.+.+++++.+|.+. .....+.++++|+++|++.+|++++|+|.++
T Consensus 366 ~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~-----~~~~~~~~g~tD~~~~~~~vP~i~~glG~~~ 438 (478)
T PLN02280 366 FRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPAN-----FTVVPPMMGAEDFSFYSQVVPAAFYYIGIRN 438 (478)
T ss_pred hCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccc-----cccCCCCeeechHHHHHhhCCEEEEEEeecC
Confidence 8888777652 2477888999999999999888766431 0111234588999999988999998877643
No 14
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-39 Score=316.05 Aligned_cols=289 Identities=20% Similarity=0.176 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcCC------------------CCEEEEecCCCCCCCeEEEeecccCCcCC---------
Q 016853 5 SVRAGNLIRQWMEDAGLRTWVDHL------------------GNVHGRVEGLNASAQALLIGSHLDTVVDA--------- 57 (381)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~~------------------gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------- 57 (381)
+.++++||.++|+++||+++..+. .|+++++++.. .++|+|+|||||||++
T Consensus 39 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~~~~--~~~lll~gH~DvVp~~~~Pf~~~~~ 116 (402)
T PRK07338 39 LARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPALHVSVRPEA--PRQVLLTGHMDTVFPADHPFQTLSW 116 (402)
T ss_pred HHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeEEEEECCCC--CccEEEEeecCccCCCCCcccCCeE
Confidence 568999999999999998875321 48999986532 3689999999999852
Q ss_pred ---------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCC
Q 016853 58 ---------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSG 128 (381)
Q Consensus 58 ---------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g 128 (381)
|+.|||+|++++|+|+++|++.+. .++++|.|+|++|||.++ .|++.++..
T Consensus 117 ~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~~~~------------- 176 (402)
T PRK07338 117 LDDGTLNGPGVADMKGGIVVMLAALLAFERSPL--ADKLGYDVLINPDEEIGS-----PASAPLLAE------------- 176 (402)
T ss_pred eeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCC--CCCCCEEEEEECCcccCC-----hhhHHHHHH-------------
Confidence 667999999999999999998886 678999999999999853 467665410
Q ss_pred CcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCC
Q 016853 129 VTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSM 208 (381)
Q Consensus 129 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~ 208 (381)
. . .+.+ .+ ++.|++. ....+..+++|..+++|+++|+++|+|..| +.
T Consensus 177 -----~----~------------~~~~--~~---i~~ep~~------~~~~v~~~~kG~~~~~v~v~G~~aHs~~~p-~~ 223 (402)
T PRK07338 177 -----L----A------------RGKH--AA---LTYEPAL------PDGTLAGARKGSGNFTIVVTGRAAHAGRAF-DE 223 (402)
T ss_pred -----H----h------------ccCc--EE---EEecCCC------CCCcEEeecceeEEEEEEEEeEcccCCCCc-cc
Confidence 0 0 0011 11 3444421 112355679999999999999999999768 68
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHH
Q 016853 209 RQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRE 288 (381)
Q Consensus 209 g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~ 288 (381)
|.||+..+++++.+|+++... . ...++|++.|++ |.+.|+||++|++++|+|+.|.++++
T Consensus 224 g~nAi~~~~~~i~~l~~l~~~------------------~-~~~t~~vg~i~g-G~~~nvVP~~a~~~~d~R~~~~~~~~ 283 (402)
T PRK07338 224 GRNAIVAAAELALALHALNGQ------------------R-DGVTVNVAKIDG-GGPLNVVPDNAVLRFNIRPPTPEDAA 283 (402)
T ss_pred CccHHHHHHHHHHHHHhhhcc------------------C-CCcEEEEEEEec-CCCCceeccccEEEEEeccCCHHHHH
Confidence 999999999999999887542 1 246899999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCceEEEEEeccCCCcc---CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhh
Q 016853 289 TVLYELSNQLYQICEKRSVSCIVERKHDANAVM---CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH 365 (381)
Q Consensus 289 ~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~ 365 (381)
+++++|++++++.+..++++++++....++++. .++++++++.+++++. |.+ +....++|+||+++++.
T Consensus 284 ~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~-g~~-------~~~~~~~g~tDa~~~~~ 355 (402)
T PRK07338 284 WAEAELKKLIAQVNQRHGVSLHLHGGFGRPPKPIDAAQQRLFEAVQACGAAL-GLT-------IDWKDSGGVCDGNNLAA 355 (402)
T ss_pred HHHHHHHHHHhccccCCCeEEEEEccccCCCCCCCcchHHHHHHHHHHHHHc-CCC-------cccccCCccchHHHHhh
Confidence 999999999988765667777665433455543 3457899988877664 432 33445679999999987
Q ss_pred h-cCeEEEEEee
Q 016853 366 L-TKVCSLLCRL 376 (381)
Q Consensus 366 ~-~p~~~~~~~~ 376 (381)
. +|++.+|.|.
T Consensus 356 ~giP~v~~~Gpg 367 (402)
T PRK07338 356 AGLPVVDTLGVR 367 (402)
T ss_pred cCCCeEeccCCC
Confidence 7 9998644443
No 15
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=4.9e-39 Score=317.41 Aligned_cols=300 Identities=17% Similarity=0.172 Sum_probs=228.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---------------------CCCCEEEEecCCCCCCCeEEEeecccCCcCC--
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVD---------------------HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~---------------------~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-- 57 (381)
+|++|.++++||+++|+++||++++. ...|++++++|..+ .|+|+|+|||||||.+
T Consensus 32 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~~-~~~l~l~~H~Dtvp~~~~ 110 (422)
T PRK06915 32 VSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPNIVATLKGSGG-GKSMILNGHIDVVPEGDV 110 (422)
T ss_pred CCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCceEEEEEcCCCC-CCeEEEEeeccccCCCCc
Confidence 46889999999999999999997532 23689999987543 5899999999999963
Q ss_pred --------------------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCC
Q 016853 58 --------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (381)
Q Consensus 58 --------------------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~ 117 (381)
|..|||+|++++|.|+++|++.+. .++++|.|++++|||+++ .|+..++.
T Consensus 111 ~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~G~~~~~~--- 180 (422)
T PRK06915 111 NQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGI--ELKGDVIFQSVIEEESGG-----AGTLAAIL--- 180 (422)
T ss_pred ccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCC--CCCCcEEEEEecccccCC-----cchHHHHh---
Confidence 666999999999999999999886 788999999999999853 36665431
Q ss_pred ccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEec
Q 016853 118 VSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS 197 (381)
Q Consensus 118 ~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~ 197 (381)
.+ +++|.++ ..| +....+..+++|..+++|+++|+
T Consensus 181 --------------------~~------------~~~d~~i-----~~e--------p~~~~i~~~~~G~~~~~i~v~G~ 215 (422)
T PRK06915 181 --------------------RG------------YKADGAI-----IPE--------PTNMKFFPKQQGSMWFRLHVKGK 215 (422)
T ss_pred --------------------cC------------cCCCEEE-----ECC--------CCCccceeecccEEEEEEEEEee
Confidence 01 1122221 112 12223567899999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCC----CCeEEEEEEEEecCCCCceeCCeE
Q 016853 198 QGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLS----SSLVCTVGEISSWPSASNVIPGEV 273 (381)
Q Consensus 198 ~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~ti~~~~i~g~g~~~NvIP~~a 273 (381)
++|+|. | +.|.||+..+++++.+|+.+....... . .++.. .+.++|++.|+| |...|+||+.|
T Consensus 216 ~~H~s~-p-~~g~nAi~~~~~~~~~l~~l~~~~~~~--~--------~~~~~~~~~~~~t~~v~~i~g-G~~~nvvP~~a 282 (422)
T PRK06915 216 AAHGGT-R-YEGVSAIEKSMFVIDHLRKLEEKRNDR--I--------TDPLYKGIPIPIPINIGKIEG-GSWPSSVPDSV 282 (422)
T ss_pred ccccCC-C-CcCcCHHHHHHHHHHHHHHHHHHhccc--c--------CCCcccCCCCCceEeEEEeeC-CCCCCccCcEE
Confidence 999997 9 799999999999999999875321000 0 01111 245899999999 89999999999
Q ss_pred EEEEEeeCCChhHHHHHHHHHHHHHHHHHHHc----CceEEEEEec-cCC--CccCCHHHHHHHHHHHHHHHhhccCCCC
Q 016853 274 TFTVDLRAIDDAGRETVLYELSNQLYQICEKR----SVSCIVERKH-DAN--AVMCDADLSSQLKSASYAALKRMTGATQ 346 (381)
Q Consensus 274 ~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~----~~~v~~~~~~-~~~--~~~~~~~~~~~l~~a~~~~~g~~~~~~~ 346 (381)
++.+|+|+.|.++.+++.++|++.+++++... +..+++++.. .++ ++.+++++++.+.+++++++|..+
T Consensus 283 ~~~~d~R~~p~~~~~~v~~~i~~~l~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~d~~lv~~l~~a~~~~~G~~~---- 358 (422)
T PRK06915 283 ILEGRCGIAPNETIEAAKEEFENWIAELNDVDEWFVEHPVEVEWFGARWVPGELEENHPLMTTLEHNFVEIEGNKP---- 358 (422)
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHHHHHhccChhhhcCCceEEeecccCCcccCCCCCHHHHHHHHHHHHHhCCCC----
Confidence 99999999999999999999999998876532 2234444432 122 345788999999999999877642
Q ss_pred cccccccCcccHHHHHHhhh--cCeEEEEEeeC
Q 016853 347 HEIPVIMSGAGHDAMAMSHL--TKVCSLLCRLN 377 (381)
Q Consensus 347 ~~~~~~~~~g~tD~~~~~~~--~p~~~~~~~~~ 377 (381)
....+++++|+++|++. +|++ .|+|+.
T Consensus 359 ---~~~~~~g~tD~~~~~~~~giP~v-~fGpg~ 387 (422)
T PRK06915 359 ---IIEASPWGTDGGLLTQIAGVPTI-VFGPGE 387 (422)
T ss_pred ---eeceeeeeccHHHHhccCCCCEE-EECCCC
Confidence 22345688999999985 9996 566654
No 16
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=3e-39 Score=314.13 Aligned_cols=302 Identities=21% Similarity=0.222 Sum_probs=232.1
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcC----CC----CEEEEecCCCCCCCeEEEeecccCCcCC----------------
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDH----LG----NVHGRVEGLNASAQALLIGSHLDTVVDA---------------- 57 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~----~g----nv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------- 57 (381)
|++|.++++||.++|+++||++++.. .. |+++.+.|.. ++|+|+|++||||||.+
T Consensus 17 ~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~ill~~H~DtVp~~~~~~w~~~Pf~~~~~~ 95 (375)
T TIGR01910 17 GGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNG-NEKSLIFNGHYDVVPAGDLELWKTDPFKPVEKD 95 (375)
T ss_pred CcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCC-CCCEEEEecccccccCCChhhCcCCCCCcEEEC
Confidence 57899999999999999999986532 12 3677777754 35899999999999974
Q ss_pred ------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcH
Q 016853 58 ------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTV 131 (381)
Q Consensus 58 ------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~ 131 (381)
|..|||++++++|+|+++|++.+. .++++|.++|+++||.+ ..|++.++.. ..+
T Consensus 96 g~i~grG~~D~k~~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g-----~~G~~~~~~~---~~~---------- 155 (375)
T TIGR01910 96 GKLYGRGATDMKGGLVALLYALKAIREAGI--KPNGNIILQSVVDEESG-----EAGTLYLLQR---GYF---------- 155 (375)
T ss_pred CEEEecCccccchHHHHHHHHHHHHHHcCC--CCCccEEEEEEcCcccC-----chhHHHHHHc---CCC----------
Confidence 677999999999999999999886 68999999999999975 3588877520 000
Q ss_pred HHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCC
Q 016853 132 LDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 211 (381)
Q Consensus 132 ~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~N 211 (381)
-++|.+ +..+++ + ...+..+++|..+++|+++|+++|+|. | +.|.|
T Consensus 156 --------------------~~~d~~-----i~~~~~------~-~~~v~~~~~G~~~~~i~~~G~~~Hs~~-p-~~g~n 201 (375)
T TIGR01910 156 --------------------KDADGV-----LIPEPS------G-GDNIVIGHKGSIWFKLRVKGKQAHASF-P-QFGVN 201 (375)
T ss_pred --------------------CCCCEE-----EECCCC------C-CCceEEEecceEEEEEEEeeeecccCC-C-Ccchh
Confidence 001211 112221 1 234677899999999999999999997 9 69999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHH
Q 016853 212 PMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVL 291 (381)
Q Consensus 212 Ai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~ 291 (381)
|+..++++|.+|+++........+. ......++++++.|++ |...|+||++|++.+|+|+.|.+++++++
T Consensus 202 Ai~~~~~~l~~l~~~~~~~~~~~~~---------~~~~~~~t~~i~~i~g-G~~~nviP~~~~~~~diR~~~~~~~~~~~ 271 (375)
T TIGR01910 202 AIMKLAKLITELNELEEHIYARNSY---------GFIPGPITFNPGVIKG-GDWVNSVPDYCEFSIDVRIIPEENLDEVK 271 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccc---------cccCCCccccceeEEC-CCCcCcCCCEEEEEEEeeeCCCCCHHHHH
Confidence 9999999999999875421110000 0111357999999999 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCceEEEEEeccCC---CccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-c
Q 016853 292 YELSNQLYQICEKRSVSCIVERKHDAN---AVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-T 367 (381)
Q Consensus 292 ~~i~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~ 367 (381)
++|+++++..+..++++++++....++ ....++++++++.+++++.+|.+ +....++|+||+++|.+. +
T Consensus 272 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-------~~~~~~~g~tD~~~~~~~gi 344 (375)
T TIGR01910 272 QIIEDVVKALSKSDGWLYENEPVVKWSGPNETPPDSRLVKALEAIIKKVRGIE-------PEVLVSTGGTDARFLRKAGI 344 (375)
T ss_pred HHHHHHHHHHhhcCcHHhhCCCeeeecCCcCCCCCCHHHHHHHHHHHHHhCCC-------CeEeeeccchhHHHHHHcCC
Confidence 999999988776666666654433333 34578889999999999987764 222345689999999987 9
Q ss_pred CeEEEEEee
Q 016853 368 KVCSLLCRL 376 (381)
Q Consensus 368 p~~~~~~~~ 376 (381)
|++. |.|+
T Consensus 345 p~v~-~Gpg 352 (375)
T TIGR01910 345 PSIV-YGPG 352 (375)
T ss_pred cEEE-ECCC
Confidence 9975 5554
No 17
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2e-38 Score=313.57 Aligned_cols=310 Identities=16% Similarity=0.152 Sum_probs=228.4
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcC------------CCCEEEEecCCCCCCCeEEEeecccCCcCC--------------
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------- 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~------------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------- 57 (381)
+|.++++||.++|+++||++++.. ..|++++++|.. ++|+|+|+|||||||.+
T Consensus 35 ~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~-~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~d 113 (427)
T PRK13013 35 AYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGAR-DGDCVHFNSHHDVVEVGHGWTRDPFGGEVKD 113 (427)
T ss_pred cHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCC-CCCEEEEEeccccCCCCCCCcCCCCCceEEC
Confidence 568999999999999999987542 248999997754 35899999999999963
Q ss_pred ------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcH
Q 016853 58 ------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTV 131 (381)
Q Consensus 58 ------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~ 131 (381)
|+.|||++++++|+|+++|++.+. .++++|.|+|++|||+++ ..|.+++..
T Consensus 114 g~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~----~~g~~~l~~----------------- 170 (427)
T PRK13013 114 GRIYGRGACDMKGGLAASIIAAEAFLAVYP--DFAGSIEISGTADEESGG----FGGVAYLAE----------------- 170 (427)
T ss_pred CEEEeccccccchHHHHHHHHHHHHHHhCC--CCCccEEEEEEeccccCC----hhHHHHHHh-----------------
Confidence 677999999999999999999886 788999999999999853 225555531
Q ss_pred HHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCC
Q 016853 132 LDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 211 (381)
Q Consensus 132 ~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~N 211 (381)
.| .++++..... +..++. + ...+..+++|..+++|+++|+++|+|. | +.|.|
T Consensus 171 ------~~-----------~~~~~~~d~~--i~~ep~------~-~~~i~~~~~G~~~~~i~v~G~~~H~~~-p-~~g~n 222 (427)
T PRK13013 171 ------QG-----------RFSPDRVQHV--IIPEPL------N-KDRICLGHRGVWWAEVETRGRIAHGSM-P-FLGDS 222 (427)
T ss_pred ------cC-----------CccccCCCEE--EEecCC------C-CCceEEeeeeEEEEEEEEEccccccCC-C-CcCcC
Confidence 11 0111001111 111221 1 123667899999999999999999997 9 79999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccc-CCCCeEEEEEEEEecCCCC----------ceeCCeEEEEEEee
Q 016853 212 PMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLES-LSSSLVCTVGEISSWPSAS----------NVIPGEVTFTVDLR 280 (381)
Q Consensus 212 Ai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~ti~~~~i~g~g~~~----------NvIP~~a~~~~diR 280 (381)
|+..++++|.+|+++..+..... ....+ ..+ .....++|++.|++ |... |+||++|++.+|+|
T Consensus 223 ai~~~~~~l~~l~~~~~~~~~~~--~~~~~---~~~~~~~~~t~~v~~i~g-G~~~~~~~~~~~~~n~IPd~a~~~idiR 296 (427)
T PRK13013 223 AIRHMGAVLAEIEERLFPLLATR--RTAMP---VVPEGARQSTLNINSIHG-GEPEQDPDYTGLPAPCVADRCRIVIDRR 296 (427)
T ss_pred HHHHHHHHHHHHHHHhhhhhhcc--cccCC---CCCcccCCCceeeeEEeC-CCccccccccccccccCCceEEEEEEEE
Confidence 99999999999986532111000 00000 000 01257899999999 7666 99999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHH-cCceEEEEEeccCCCcc--CCHHHHHHHHHHHHHHHhhccCCCCcccccccCccc
Q 016853 281 AIDDAGRETVLYELSNQLYQICEK-RSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAG 357 (381)
Q Consensus 281 ~~p~~~~~~~~~~i~~~~~~~~~~-~~~~v~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~ 357 (381)
++|.++.++++++|++++++++.. .+++++++....++++. .++++++.+.+++++.+|.. +....++++
T Consensus 297 ~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~lv~~l~~a~~~~~g~~-------~~~~~~~g~ 369 (427)
T PRK13013 297 FLIEEDLDEVKAEITALLERLKRARPGFAYEIRDLFEVLPTMTDRDAPVVRSVAAAIERVLGRQ-------ADYVVSPGT 369 (427)
T ss_pred eCCCCCHHHHHHHHHHHHHHHHhhCCCceeEEEEcccCCcccCCCCCHHHHHHHHHHHHhhCCC-------CceeecCcc
Confidence 999999999999999999887653 35666665544556654 45689999999999987754 333356788
Q ss_pred HHHHHHhhh--cCeEEEEEeeCC
Q 016853 358 HDAMAMSHL--TKVCSLLCRLNN 378 (381)
Q Consensus 358 tD~~~~~~~--~p~~~~~~~~~~ 378 (381)
+|++++++. +|.++.|.|+..
T Consensus 370 ~D~~~~~~~g~~~~~v~fGPg~~ 392 (427)
T PRK13013 370 YDQKHIDRIGKLKNCIAYGPGIL 392 (427)
T ss_pred CCHHHHHhcCCCCCEEEECCCCc
Confidence 999999886 456668888653
No 18
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=7.5e-38 Score=304.36 Aligned_cols=301 Identities=19% Similarity=0.223 Sum_probs=228.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---CCCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~---~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------------- 57 (381)
+|++|.++++||.++|+++||+++.. ..+|+++++ |. ++|+|+|++||||||.+
T Consensus 17 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~-g~--~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iy 93 (375)
T PRK13009 17 VTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARR-GT--EGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLY 93 (375)
T ss_pred CCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEe-cC--CCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEE
Confidence 36789999999999999999998753 356899988 54 35999999999999964
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHH
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~ 135 (381)
|..|||++++++|+|+++|++.+. .++++|.++|++|||.++ ..|++.+.+.+
T Consensus 94 GrG~~D~Kgg~aa~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~~~----~~G~~~~~~~~------------------- 148 (375)
T PRK13009 94 GRGAADMKGSLAAFVVAAERFVAAHP--DHKGSIAFLITSDEEGPA----INGTVKVLEWL------------------- 148 (375)
T ss_pred ecCCccChHHHHHHHHHHHHHHHhcC--CCCceEEEEEEeeccccc----ccCHHHHHHHH-------------------
Confidence 556999999999999999998875 788999999999999752 35888875221
Q ss_pred HHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 016853 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (381)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~ 215 (381)
.+.+. .+|.+ +..|+... ......+..+++|..+++|+++|+++|+|. | +.|.||+..
T Consensus 149 ~~~~~------------~~d~~-----i~~ep~~~---~~~~~~i~~g~~g~~~~~i~v~G~~~Ha~~-p-~~g~nAi~~ 206 (375)
T PRK13009 149 KARGE------------KIDYC-----IVGEPTST---ERLGDVIKNGRRGSLTGKLTVKGVQGHVAY-P-HLADNPIHL 206 (375)
T ss_pred HHcCc------------CCCEE-----EEcCCCcc---cCCCCeEEEecceEEEEEEEEEecCcccCC-C-CcccCHHHH
Confidence 11111 12221 11222110 001112566899999999999999999996 9 799999999
Q ss_pred HHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHH
Q 016853 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELS 295 (381)
Q Consensus 216 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~ 295 (381)
+++++.+|+.+..+.. ++.+.+.+++++.|++++...|+||++|++.+|+|++|.++.++++++|+
T Consensus 207 ~~~~l~~l~~~~~~~~--------------~~~~~~~~~~i~~i~~G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~ 272 (375)
T PRK13009 207 AAPALAELAATEWDEG--------------NEFFPPTSLQITNIDAGTGATNVIPGELEAQFNFRFSTEHTAESLKARVE 272 (375)
T ss_pred HHHHHHHHHhhhccCC--------------CccCCCceEEEEEEecCCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHH
Confidence 9999999987642210 12234678999999983347899999999999999999999999999999
Q ss_pred HHHHHHHHHcCceEEEEEeccCCCcc-CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEE
Q 016853 296 NQLYQICEKRSVSCIVERKHDANAVM-CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLL 373 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~ 373 (381)
+.++. .++++++++....+++. +++++++.+.+++++++|.+ +....++|+||++++.+. +|++ .|
T Consensus 273 ~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~l~~a~~~~~g~~-------~~~~~~~g~tda~~~~~~g~p~v-~~ 340 (375)
T PRK13009 273 AILDK----HGLDYTLEWTLSGEPFLTPPGKLVDAVVAAIEAVTGIT-------PELSTSGGTSDARFIADYGAQVV-EF 340 (375)
T ss_pred HHHHh----cCCCeEEEEecCCCcccCCCcHHHHHHHHHHHHHhCCC-------ceeeccCCCccHHHHHHcCCCeE-Ee
Confidence 88863 35667776654444543 34789999999999988764 333356688999999886 6766 57
Q ss_pred EeeC
Q 016853 374 CRLN 377 (381)
Q Consensus 374 ~~~~ 377 (381)
.|+.
T Consensus 341 Gp~~ 344 (375)
T PRK13009 341 GPVN 344 (375)
T ss_pred ccCc
Confidence 7764
No 19
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=2.7e-38 Score=305.98 Aligned_cols=291 Identities=19% Similarity=0.223 Sum_probs=229.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcC-------CCCEEEEecCCCCCCCeEEEeecccCCcCC---------------C
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------G 58 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~-------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------g 58 (381)
+|++|.++++||.++|+++||+++++. ..|+++.++|+. ++|+|+|.||+||||.+ |
T Consensus 15 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G 93 (361)
T TIGR01883 15 ESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTV-KFDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLG 93 (361)
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCC-CCCcEEEEeeccccCCCCCCCceecCCeEecCC
Confidence 367899999999999999999987664 568999997764 35899999999999953 4
Q ss_pred C----CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHH
Q 016853 59 I----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (381)
Q Consensus 59 ~----~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~ 134 (381)
. .|||+|++++|.++++|++.+ .++++|.|+|++|||.+ ..|++.+...
T Consensus 94 ~~~~g~D~k~g~a~~l~~~~~l~~~~---~~~~~v~~~~~~~EE~g-----~~G~~~~~~~------------------- 146 (361)
T TIGR01883 94 GTILGADDKAGVAAMLEAMDVLSTEE---TPHGTIEFIFTVKEELG-----LIGMRLFDES------------------- 146 (361)
T ss_pred CeEeeccccHHHHHHHHHHHHHHhcC---CCCCCEEEEEEcccccC-----chhHhHhChh-------------------
Confidence 4 799999999999999998876 47889999999999974 3578765310
Q ss_pred HHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHH
Q 016853 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (381)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~ 214 (381)
.+.+ .++ ++++++ .....++.+.+|..+++|+++|+++|+|..| +.|.||+.
T Consensus 147 ----------------~~~~--~~~---~~~~~~------~~~~~i~~~~~g~~~~~i~~~G~~~Ha~~~p-~~g~nAi~ 198 (361)
T TIGR01883 147 ----------------KITA--AYG---YCLDAP------GEVGNIQLAAPTQVKVDATIAGKDAHAGLVP-EDGISAIS 198 (361)
T ss_pred ----------------hcCc--cee---EEEeCC------CCcceEEecCCceEEEEEEEEeeecCCCCCc-ccCcCHHH
Confidence 0001 111 233321 1112366678999999999999999986559 69999999
Q ss_pred HHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHH
Q 016853 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (381)
Q Consensus 215 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i 294 (381)
.+++++.+++.... + ...+++++.+++ |...|+||++|++.+|+|..|..+.+.+.++|
T Consensus 199 ~~~~~i~~l~~~~~------------------~--~~~~~~i~~i~g-G~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i 257 (361)
T TIGR01883 199 VARMAIHAMRLGRI------------------D--EETTANIGSFSG-GVNTNIVQDEQLIVAEARSLSFRKAEAQVQTM 257 (361)
T ss_pred HHHHHHHhccccCC------------------C--Cccccccceeec-CCccCccCCceEEEEEEecCCHHHHHHHHHHH
Confidence 99999988864211 1 135789999999 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEE
Q 016853 295 SNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCS 371 (381)
Q Consensus 295 ~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~ 371 (381)
++.++..+..++++++++....++++ ..++++++++.+++++ +|.+ +...+++|+||+++++.. +|+++
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~-~g~~-------~~~~~~~g~tD~~~~~~~giP~v~ 329 (361)
T TIGR01883 258 RERFEQAAEKYGATLEEETRLIYEGFKIHPQHPLMNIFKKAAKK-IGLK-------TSEIFSGGGSDANVLNEKGVPTVN 329 (361)
T ss_pred HHHHHHHHHHcCCEEEEEEEeccccccCCCCCHHHHHHHHHHHH-cCCC-------cEEEecCcccHHHHHhhCCCceEE
Confidence 99999888778888777665556665 4577899999999987 4543 223456789999999976 99998
Q ss_pred EEEee
Q 016853 372 LLCRL 376 (381)
Q Consensus 372 ~~~~~ 376 (381)
++.|.
T Consensus 330 ~G~g~ 334 (361)
T TIGR01883 330 LSAGY 334 (361)
T ss_pred ECCCc
Confidence 76554
No 20
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=5.2e-38 Score=310.28 Aligned_cols=306 Identities=16% Similarity=0.141 Sum_probs=226.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---------------------CCCCEEEEecCCCCCCCeEEEeecccCCcCC--
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVD---------------------HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~---------------------~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-- 57 (381)
+|++|.++++||.++|+++|+++++. ..+|++++++|..+++|+|+|+|||||||.+
T Consensus 35 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~g~~~~~~~il~~gH~DvVp~~~~ 114 (427)
T PRK06837 35 TRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAPNVVGTYRPAGKTGRSLILQGHIDVVPEGPL 114 (427)
T ss_pred CCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCceEEEEecCCCCCCCeEEEEeecccCCCCCc
Confidence 47889999999999999999997542 3468999998765446899999999999974
Q ss_pred --------------------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCC
Q 016853 58 --------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (381)
Q Consensus 58 --------------------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~ 117 (381)
|+.|||+|++++|+|+++|++.++ .++++|.++|+++||.++ .|+..++
T Consensus 115 ~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~~g-----~g~~~~~---- 183 (427)
T PRK06837 115 DLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGL--APAARVHFQSVIEEESTG-----NGALSTL---- 183 (427)
T ss_pred cccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCC--CCCCcEEEEEEeccccCC-----HhHHHHH----
Confidence 777999999999999999999986 789999999999999752 3554432
Q ss_pred ccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEec
Q 016853 118 VSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS 197 (381)
Q Consensus 118 ~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~ 197 (381)
..+ +..|.++ ..+ +....+..+.+|..+++|+++|+
T Consensus 184 -------------------~~~------------~~~d~~i-----v~e--------p~~~~i~~~~~G~~~~~i~v~G~ 219 (427)
T PRK06837 184 -------------------QRG------------YRADACL-----IPE--------PTGEKLVRAQVGVIWFRLRVRGA 219 (427)
T ss_pred -------------------hcC------------cCCCEEE-----EcC--------CCCCccccccceeEEEEEEEEee
Confidence 011 1122221 111 12223567899999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEE
Q 016853 198 QGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTV 277 (381)
Q Consensus 198 ~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~ 277 (381)
++|+|. | +.|.||+..+++++.+|+++.............+ .....+.++|++.|++ |...|+||++|++.+
T Consensus 220 ~~Hs~~-p-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~-----~~~~~~~t~ni~~i~g-G~~~nvVP~~~~~~~ 291 (427)
T PRK06837 220 PVHVRE-A-GTGANAIDAAYHLIQALRELEAEWNARKASDPHF-----EDVPHPINFNVGIIKG-GDWASSVPAWCDLDC 291 (427)
T ss_pred ccccCC-c-ccCcCHHHHHHHHHHHHHHHHHHHhhcccCCCcc-----cCCCCceeEeeeeEeC-CCCCCccCCEEEEEE
Confidence 999997 9 7999999999999999988753210000000000 0011356899999999 899999999999999
Q ss_pred EeeCCChhHHHHHHHHHHHHHHHHHHHc----CceEEEEEec-cCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccc
Q 016853 278 DLRAIDDAGRETVLYELSNQLYQICEKR----SVSCIVERKH-DANAV--MCDADLSSQLKSASYAALKRMTGATQHEIP 350 (381)
Q Consensus 278 diR~~p~~~~~~~~~~i~~~~~~~~~~~----~~~v~~~~~~-~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~ 350 (381)
++|+.|++++++++++|+++++..+... +..+++++.. ..+++ ..++++++.+.+++++.+|.+ +.
T Consensus 292 ~ir~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~~~~g~~-------~~ 364 (427)
T PRK06837 292 RIAIYPGVTAADAQAEIEACLAAAARDDRFLSNNPPEVVWSGFLAEGYVLEPGSEAEAALARAHAAVFGGP-------LR 364 (427)
T ss_pred EEeECCCCCHHHHHHHHHHHHHHHHhcChhhhhCCCeEEEEecccCCcCCCCCCHHHHHHHHHHHHHhCCC-------Ce
Confidence 9999999999999999999998765432 2223444322 33444 466789999999999988753 22
Q ss_pred cccCcccHHHHHHhh-h-cCeEEEEEeeC
Q 016853 351 VIMSGAGHDAMAMSH-L-TKVCSLLCRLN 377 (381)
Q Consensus 351 ~~~~~g~tD~~~~~~-~-~p~~~~~~~~~ 377 (381)
...++|+||+++++. . +|++ .|.|+.
T Consensus 365 ~~~~~g~tDa~~~~~~~gip~v-~~Gp~~ 392 (427)
T PRK06837 365 SFVTTAYTDTRFYGLYYGIPAL-CYGPSG 392 (427)
T ss_pred eeEEeeccchHHHhccCCCCEE-EECCCC
Confidence 224568899999985 3 9977 466653
No 21
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=2.2e-37 Score=300.57 Aligned_cols=300 Identities=19% Similarity=0.220 Sum_probs=227.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---CCCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~---~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------------- 57 (381)
.|++|.++++||.++|+++||++++. +.+|+++++ |. ++|+|+|+||+||||.+
T Consensus 14 ~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~-g~--~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~y 90 (370)
T TIGR01246 14 VTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATR-GT--GEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLY 90 (370)
T ss_pred CCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEe-cC--CCcEEEEEccccccCCCCccccccCCCCcEEECCEEE
Confidence 47889999999999999999998754 456899986 43 35899999999999863
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHH
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~ 135 (381)
|..|||++++++|.|++.|++.+. .++++|.++|++|||.++ ..|++.+...+
T Consensus 91 GrG~~D~Kgg~a~~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~~~----~~G~~~~~~~~------------------- 145 (370)
T TIGR01246 91 GRGAADMKGSLAAFIVAAERFVKKNP--DHKGSISLLITSDEEGTA----IDGTKKVVETL------------------- 145 (370)
T ss_pred ecccccchHHHHHHHHHHHHHHHhcC--CCCCcEEEEEEeccccCC----CcCHHHHHHHH-------------------
Confidence 556999999999999999988875 688999999999999752 35888875211
Q ss_pred HHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 016853 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (381)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~ 215 (381)
...+ ..+|.++ ..|++.... . ...+..+++|..+++|+++|+++|+|. | +.|.||+..
T Consensus 146 ~~~~------------~~~d~~i-----~~ep~~~~~-~--~~~i~~~~~G~~~~~v~v~G~~~H~~~-p-~~g~nAi~~ 203 (370)
T TIGR01246 146 MARD------------ELIDYCI-----VGEPSSVKK-L--GDVIKNGRRGSITGNLTIKGIQGHVAY-P-HLANNPIHK 203 (370)
T ss_pred HhcC------------CCCCEEE-----EcCCCCccc-C--CceEEEeeeEEEEEEEEEEccCcccCC-c-ccCCCHHHH
Confidence 0101 1122221 223321110 0 112567899999999999999999997 9 799999999
Q ss_pred HHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCC-CCceeCCeEEEEEEeeCCChhHHHHHHHHH
Q 016853 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPS-ASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (381)
Q Consensus 216 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~-~~NvIP~~a~~~~diR~~p~~~~~~~~~~i 294 (381)
+++++..|+...... . +....+.+++++.|++ |. ..|+||++|++.+|+|+.|.++.++++++|
T Consensus 204 ~~~~i~~l~~~~~~~--------~------~~~~~~~t~~i~~i~~-g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i 268 (370)
T TIGR01246 204 AAPALAELTAIKWDE--------G------NEFFPPTSLQITNIHA-GTGANNVIPGELYVQFNLRFSTEVSDEILKQRV 268 (370)
T ss_pred HHHHHHHHhhhhhcc--------C------CccCCCCceEeeeeec-CCCCCcccCCceEEEEEEecCCCCCHHHHHHHH
Confidence 999999998653211 0 0122456899999999 64 789999999999999999999999999999
Q ss_pred HHHHHHHHHHcCceEEEEEeccCCC-ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEE
Q 016853 295 SNQLYQICEKRSVSCIVERKHDANA-VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSL 372 (381)
Q Consensus 295 ~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~ 372 (381)
+++++. +++++++++....+| ..+++++++.+.+++++.+|.+ +....++|+||++++... +|++ .
T Consensus 269 ~~~~~~----~~~~~~v~~~~~~~p~~~~~~~~~~~~~~a~~~~~g~~-------~~~~~~~g~~d~~~~~~~g~p~~-~ 336 (370)
T TIGR01246 269 EAILDQ----HGLDYDLEWSLSGEPFLTNDGKLIDKAREAIEETNGIK-------PELSTGGGTSDGRFIALMGAEVV-E 336 (370)
T ss_pred HHHHHH----cCCCEEEEEecCCcceeCCCCHHHHHHHHHHHHHhCCC-------CceecCCCCchHHHHHHcCCCEE-E
Confidence 887754 466666665544444 3357889999999999987754 333456788999999887 7766 5
Q ss_pred EEeeC
Q 016853 373 LCRLN 377 (381)
Q Consensus 373 ~~~~~ 377 (381)
|.|+.
T Consensus 337 ~Gp~~ 341 (370)
T TIGR01246 337 FGPVN 341 (370)
T ss_pred ecCCc
Confidence 77664
No 22
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=3.3e-37 Score=295.27 Aligned_cols=310 Identities=22% Similarity=0.295 Sum_probs=250.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCC-C-CEEEEecCCCCCCCeEEEeecccCCc-----------------CCCCCc
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHL-G-NVHGRVEGLNASAQALLIGSHLDTVV-----------------DAGIFD 61 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~-g-nv~a~~~g~~~~~~~i~l~~H~DtVp-----------------~~g~~D 61 (381)
||++|.+.++||.+.|+++|+++..... + .+++.+.|..+ +|+|.|.+.||.+| |.|+||
T Consensus 27 L~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~-g~tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD 105 (392)
T COG1473 27 LGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKP-GPTIALRADMDALPIQEETGLPFASKNPGVMHACGHD 105 (392)
T ss_pred cchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCC-CCEEEEEeecccCccccccCCCcccCCCCCcccCCch
Confidence 6899999999999999999999433332 2 49999986654 47999999999999 569999
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCC
Q 016853 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSID 141 (381)
Q Consensus 62 ~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~ 141 (381)
.+..++ |.++++|++..- .++++|.|+|.+.||.++ |++.+++ +++ ++
T Consensus 106 ~Hta~l--LgaA~~L~~~~~--~~~Gtv~~ifQPAEE~~~------Ga~~mi~------------------~G~----~~ 153 (392)
T COG1473 106 GHTAIL--LGAALALAEHKD--NLPGTVRLIFQPAEEGGG------GAKAMIE------------------DGV----FD 153 (392)
T ss_pred HHHHHH--HHHHHHHHhhhh--hCCcEEEEEecccccccc------cHHHHHh------------------cCC----cc
Confidence 998766 888999987732 689999999999999863 7877651 111 10
Q ss_pred hhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHH
Q 016853 142 IAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (381)
Q Consensus 142 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~ 221 (381)
.+ +|.+++ +|+.++.+........|.. ..+...++|+++|+++|++. | +.++||+.+++.++.
T Consensus 154 ---------~~-vD~v~g---~H~~p~~~~g~v~~~~G~~--~aa~d~~~i~~~GkggH~a~-P-h~~~d~i~aa~~~v~ 216 (392)
T COG1473 154 ---------DF-VDAVFG---LHPGPGLPVGTVALRPGAL--MAAADEFEITFKGKGGHAAA-P-HLGIDALVAAAQLVT 216 (392)
T ss_pred ---------cc-ccEEEE---ecCCCCCCCceEEeecccc--eeecceEEEEEEeCCcccCC-c-ccccCHHHHHHHHHH
Confidence 12 455555 6987653222222222222 66789999999999999987 9 799999999999999
Q ss_pred HHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHH
Q 016853 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQI 301 (381)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~ 301 (381)
+|+.+..+.. +|. .+.+++++.+++ |.+.|+||+++++++++|....+..+.+.++|+++++.+
T Consensus 217 ~lq~ivsr~~--------------~p~-~~~vv~vg~~~a-G~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~ 280 (392)
T COG1473 217 ALQTIVSRNV--------------DPL-DSAVVTVGKIEA-GTAANVIPDSAELEGTIRTFSDEVREKLEARIERIAKGI 280 (392)
T ss_pred HHHHHHhccc--------------CCc-cCeEEEEEEecC-CCcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 9999987642 355 367999999999 899999999999999999999999999999999999999
Q ss_pred HHHcCceEEEEEeccCCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCCC
Q 016853 302 CEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 379 (381)
Q Consensus 302 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~~ 379 (381)
+..+++++++.+...+|++.||+.+.+.+++++++..|..- ....... ...|++|+++|++.+|.+++|+|+...
T Consensus 281 a~~~g~~~ei~~~~~~p~~~Nd~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~gsEDf~~~~~~~Pg~~~~lG~~~~ 355 (392)
T COG1473 281 AAAYGAEAEIDYERGYPPVVNDPALTDLLAEAAEEVGGEEV--VVVELPP-SMAGSEDFGYYLEKVPGAFFFLGTGSA 355 (392)
T ss_pred HHHhCCeEEEEecCCCCCccCCHHHHHHHHHHHHHhccccc--eecccCC-CCCccchHHHHHHhCCeeEEEeecCcC
Confidence 99999999999999999999999999999999999986431 1011111 233889999999999999999998764
No 23
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=2.8e-37 Score=297.09 Aligned_cols=274 Identities=17% Similarity=0.211 Sum_probs=213.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcC-------------CCCCcChHHHH
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD-------------AGIFDGSLGII 67 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~-------------~g~~D~k~gia 67 (381)
.|++|.++++||.++|+++|+++++++.+|++. .| .|+|+|+||+||||. .|+.|||+|++
T Consensus 25 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~--~g----~~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~a 98 (346)
T PRK00466 25 PSGNETNATKFFEKISNELNLKLEILPDSNSFI--LG----EGDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLI 98 (346)
T ss_pred CCCCHHHHHHHHHHHHHHcCCeEEEecCCCcEe--cC----CCeEEEEeccccCCCCCCceeeCCEEEecCccccchHHH
Confidence 367899999999999999999999888888764 23 378999999999997 38899999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhh
Q 016853 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESL 147 (381)
Q Consensus 68 a~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~ 147 (381)
++|+|+++|++.+ .++.|+|++|||+++ .|++.++. .+.
T Consensus 99 a~l~a~~~l~~~~------~~i~~~~~~dEE~g~-----~G~~~l~~-----------------------~~~------- 137 (346)
T PRK00466 99 SMIIAAWLLNEKG------IKVMVSGLADEESTS-----IGAKELVS-----------------------KGF------- 137 (346)
T ss_pred HHHHHHHHHHHcC------CCEEEEEEcCcccCC-----ccHHHHHh-----------------------cCC-------
Confidence 9999999998875 358999999999852 58887752 011
Q ss_pred hhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 016853 148 LQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLC 227 (381)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~ 227 (381)
++|.+ +..|| .+ ...+..+++|..+++|+++|+++|+|. | . .||+..|++++.++.+..
T Consensus 138 -----~~d~~-----i~~ep------~~-~~~i~~~~kG~~~~~i~v~G~~~Has~-p-~--~nAi~~~~~~l~~l~~~~ 196 (346)
T PRK00466 138 -----NFKHI-----IVGEP------SN-GTDIVVEYRGSIQLDIMCEGTPEHSSS-A-K--SNLIVDISKKIIEVYKQP 196 (346)
T ss_pred -----CCCEE-----EEcCC------CC-CCceEEEeeEEEEEEEEEEeeccccCC-C-C--cCHHHHHHHHHHHHHhcc
Confidence 12211 11222 11 124777899999999999999999997 7 3 599999999999887542
Q ss_pred cCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCc
Q 016853 228 KHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 307 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~ 307 (381)
. +. ...+++++.|++ |...|+||++|++++|+|++|+++.++++++|++++.. +
T Consensus 197 ~------------------~~-~~~t~~~~~i~g-G~~~NvvP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~ 250 (346)
T PRK00466 197 E------------------NY-DKPSIVPTIIRA-GESYNVTPAKLYLHFDVRYAINNKRDDLISEIKDKFQE------C 250 (346)
T ss_pred c------------------cC-CCCcceeeEEec-CCcCcccCCceEEEEEEEeCCCCCHHHHHHHHHHHHhh------C
Confidence 2 11 246899999999 89999999999999999999999999999999887754 3
Q ss_pred eEEEEEeccCCCcc--CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 308 SCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 308 ~v~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
++++ ...++++. .++++++.+.+++++. |.+ +....++|+||+++|++..|.++.|+|+..
T Consensus 251 ~~~~--~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~-------~~~~~~~g~tD~~~~~~~~~~~v~fGpg~~ 313 (346)
T PRK00466 251 GLKI--VDETPPVKVSINNPVVKALMRALLKQ-NIK-------PRLVRKAGTSDMNILQKITTSIATYGPGNS 313 (346)
T ss_pred cEee--ccCCCCcccCCCCHHHHHHHHHHHHh-CCC-------ceEEecCCcCcHHHHHHhCCCEEEECCCCc
Confidence 3332 33455543 5689999999999984 542 333456789999999988777778888653
No 24
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=9e-37 Score=299.50 Aligned_cols=288 Identities=18% Similarity=0.145 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC------------------------
Q 016853 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------------ 57 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------------ 57 (381)
+++.++++||.++|+++|++ ++.+..+||+++++|+.++.|+|+|+||+||||.+
T Consensus 28 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~ 107 (404)
T PRK13381 28 PGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDVGLSPDIHPQILRFDGGDLCLNAEQG 107 (404)
T ss_pred hhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCccCCCCcCcEEEecCCCceecCCccc
Confidence 46889999999999999995 66777889999998765445999999999999853
Q ss_pred -----------------------CC----CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchH
Q 016853 58 -----------------------GI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSA 110 (381)
Q Consensus 58 -----------------------g~----~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~ 110 (381)
|. .|||+|++++|.|+++|++.+ .++++|.|+|+++||.+ ..|++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~---~~~g~i~~~~~~dEE~g-----~~G~~ 179 (404)
T PRK13381 108 IWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE---VEHGDIVVAFVPDEEIG-----LRGAK 179 (404)
T ss_pred eeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC---CCCCCEEEEEEcccccc-----cccHH
Confidence 34 899999999999999998876 46889999999999985 35888
Q ss_pred HHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEE
Q 016853 111 ALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRL 190 (381)
Q Consensus 111 ~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 190 (381)
.++. + .+.+|..+ +++.+. ...+..+++|..++
T Consensus 180 ~~~~----------------------~-------------~~~~d~~~-----~~~~~~-------~~~i~~~~~G~~~~ 212 (404)
T PRK13381 180 ALDL----------------------A-------------RFPVDFAY-----TIDCCE-------LGEVVYENFNAASA 212 (404)
T ss_pred HHHH----------------------h-------------cCCCCEEE-----EecCCC-------cceEEEecCcceEE
Confidence 7631 0 01122211 122121 12356679999999
Q ss_pred EEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeC
Q 016853 191 KVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIP 270 (381)
Q Consensus 191 ~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP 270 (381)
+|+++|+++|++..| +.|.|||..+++++.+|+++..+.. .+. ...+++++.+++ + |
T Consensus 213 ~v~v~Gk~aHa~~~p-~~g~NAI~~a~~~i~~l~~~~~~~~--------------~~~-~~~~i~v~~i~g-~------p 269 (404)
T PRK13381 213 EITITGVTAHPMSAK-GVLVNPILMANDFISHFPRQETPEH--------------TEG-REGYIWVNDLQG-N------V 269 (404)
T ss_pred EEEEEeEecCCCCCc-ccCcCHHHHHHHHHHhCCccCCCCC--------------CCC-cccEEEEEeEEe-C------c
Confidence 999999999987558 6899999999999999876533210 011 134678887777 3 8
Q ss_pred CeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcC-ceEEEEEeccC--C--CccCCHHHHHHHHHHHHHHHhhccCCC
Q 016853 271 GEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS-VSCIVERKHDA--N--AVMCDADLSSQLKSASYAALKRMTGAT 345 (381)
Q Consensus 271 ~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~-~~v~~~~~~~~--~--~~~~~~~~~~~l~~a~~~~~g~~~~~~ 345 (381)
++|++.+|+|+.|.++.++++++|++++++++..++ +++++++...+ + .+..++++++.+.+++++. |.+
T Consensus 270 ~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~---- 344 (404)
T PRK13381 270 NKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPTARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIE---- 344 (404)
T ss_pred ceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCC----
Confidence 999999999999999999999999999999887776 56666543322 2 2457889999999999864 432
Q ss_pred CcccccccCcccHHHHHHhhh-cCeEEEEEee
Q 016853 346 QHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 346 ~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~~ 376 (381)
+...+++++||+++|+.. +|+++++.|.
T Consensus 345 ---~~~~~~~g~tDa~~~~~~giP~v~~GpG~ 373 (404)
T PRK13381 345 ---PKVIPMRGGTDGAALSAKGLPTPNLFTGA 373 (404)
T ss_pred ---eeeccCCccchHHHHhcCCCCeEEECccc
Confidence 333345688999999876 9999877554
No 25
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-37 Score=301.59 Aligned_cols=302 Identities=22% Similarity=0.194 Sum_probs=225.9
Q ss_pred HHHHHHHHHHHHHHHcCCE-EEEcC----------CCCEEEEecCCCCCCCeEEEeecccCCcCC---------------
Q 016853 4 ASVRAGNLIRQWMEDAGLR-TWVDH----------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------- 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~-~~~~~----------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------- 57 (381)
+|.++++||.++|+++||+ +++.. .+|++++++|.. ++++|+|+|||||||.+
T Consensus 28 ~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~-~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~ 106 (400)
T PRK13983 28 GEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGD-GKRTLWIISHMDVVPPGDLSLWETDPFKPVVK 106 (400)
T ss_pred cHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCC-CCCeEEEEeeccccCCCCcccccCCCCcceee
Confidence 5899999999999999998 76431 478999997754 34799999999999963
Q ss_pred -------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCc
Q 016853 58 -------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (381)
Q Consensus 58 -------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~ 130 (381)
|+.|||+|++++|.|+++|++.++ .++++|.|+|++|||.++ ..|++++..... ..+
T Consensus 107 ~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~----~~g~~~~~~~~~-~~~--------- 170 (400)
T PRK13983 107 DGKIYGRGSEDNGQGIVSSLLALKALMDLGI--RPKYNLGLAFVSDEETGS----KYGIQYLLKKHP-ELF--------- 170 (400)
T ss_pred CCEEEecCccCccchHHHHHHHHHHHHHhCC--CCCCcEEEEEEeccccCC----cccHHHHHhhcc-ccc---------
Confidence 577999999999999999999887 789999999999999753 237777752100 000
Q ss_pred HHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCC
Q 016853 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQ 210 (381)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~ 210 (381)
.+.|.+ +..+.+.+ . ...+..+++|..+++|+++|+++|+|. | +.|.
T Consensus 171 ---------------------~~~d~~-----i~~~~~~~---~--~~~i~~~~~G~~~~~v~v~G~~~Hs~~-p-~~g~ 217 (400)
T PRK13983 171 ---------------------KKDDLI-----LVPDAGNP---D--GSFIEIAEKSILWLKFTVKGKQCHAST-P-ENGI 217 (400)
T ss_pred ---------------------CCCCEE-----EEecCCCC---C--CceeEEeecceEEEEEEEEeEccccCC-C-CCCC
Confidence 001111 11111111 1 112567899999999999999999997 9 6999
Q ss_pred CHHHHHHHHHHHHHH-HhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHH
Q 016853 211 DPMTAAAELIVLLER-LCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRET 289 (381)
Q Consensus 211 NAi~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~ 289 (381)
||+..+++++.+++. +...+ .. .+..+ .+ ...+++++.+.+++...|+||++|++++|+|++|+++.++
T Consensus 218 nAi~~~~~~i~~l~~~~~~~~-~~--~~~~~-----~~--~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~ 287 (400)
T PRK13983 218 NAHRAAADFALELDEALHEKF-NA--KDPLF-----DP--PYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDE 287 (400)
T ss_pred CHHHHHHHHHHHHHHHHHhhh-cc--ccccc-----CC--CCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHH
Confidence 999999999999987 43211 00 00000 11 1246777888873368999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCceEEEEEec-cC--CCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh
Q 016853 290 VLYELSNQLYQICEKRSVSCIVERKH-DA--NAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL 366 (381)
Q Consensus 290 ~~~~i~~~~~~~~~~~~~~v~~~~~~-~~--~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~ 366 (381)
++++|+++++..+..++.+++++... .+ +++..++++++.+.+++++.+|..| ....++|+||++++...
T Consensus 288 v~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~-------~~~~~~g~td~~~~~~~ 360 (400)
T PRK13983 288 VLKDIKEIADEFEEEYGVKIEVEIVQREQAPPPTPPDSEIVKKLKRAIKEVRGIEP-------KVGGIGGGTVAAFLRKK 360 (400)
T ss_pred HHHHHHHHHHHhccccCcceeEEEeeccCCccCCCCCcHHHHHHHHHHHHhcCCCc-------eeeeecCcHHHHHHHHc
Confidence 99999999998776667777776543 22 3456788999999999999887642 22345688999999876
Q ss_pred -cCeEEE
Q 016853 367 -TKVCSL 372 (381)
Q Consensus 367 -~p~~~~ 372 (381)
+|++++
T Consensus 361 gip~v~~ 367 (400)
T PRK13983 361 GYPAVVW 367 (400)
T ss_pred CCCEEEe
Confidence 999865
No 26
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=8.2e-37 Score=300.11 Aligned_cols=289 Identities=19% Similarity=0.202 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcCC-----CCEEEEecCCCCCCCeEEEeecccCCcCC------------------CCCc
Q 016853 5 SVRAGNLIRQWMEDAGLRTWVDHL-----GNVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIFD 61 (381)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~~-----gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------g~~D 61 (381)
+.++++||.++|+++||+++++.. .|++++++|. +.|+|+|+|||||||.+ |+.|
T Consensus 59 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~--~~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D 136 (410)
T PRK06133 59 LKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGT--GKRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIAD 136 (410)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCC--CCceEEEEeecCccCCCCccCCCCEEEECCEEECCcccc
Confidence 458999999999999999876542 4799999765 35899999999999963 5579
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCC
Q 016853 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSID 141 (381)
Q Consensus 62 ~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~ 141 (381)
||++++++|+|+++|++.+. .++++|.++|+++||.+ ..|++.+... . .
T Consensus 137 ~kgg~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g-----~~G~~~~~~~------------------~----~-- 185 (410)
T PRK06133 137 DKGGVAVILHALKILQQLGF--KDYGTLTVLFNPDEETG-----SPGSRELIAE------------------L----A-- 185 (410)
T ss_pred chHHHHHHHHHHHHHHHcCC--CCCCCEEEEEECCcccC-----CccHHHHHHH------------------H----h--
Confidence 99999999999999999886 67899999999999974 2588876521 0 0
Q ss_pred hhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHH
Q 016853 142 IAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (381)
Q Consensus 142 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~ 221 (381)
.++|.++ ..+++. ....+..+.+|..+++|+++|+++|+|..| +.|.||+..+++++.
T Consensus 186 ----------~~~d~~i-----~~ep~~------~~~~v~~~~~G~~~~~v~v~G~~~Hsg~~p-~~g~nAi~~~~~~i~ 243 (410)
T PRK06133 186 ----------AQHDVVF-----SCEPGR------AKDALTLATSGIATALLEVKGKASHAGAAP-ELGRNALYELAHQLL 243 (410)
T ss_pred ----------ccCCEEE-----EeCCCC------CCCCEEEeccceEEEEEEEEeeccccCCCc-ccCcCHHHHHHHHHH
Confidence 0122221 223221 112356789999999999999999987559 699999999999999
Q ss_pred HHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHH
Q 016853 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQI 301 (381)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~ 301 (381)
.|+++.. +. ...+++++.|+| |.+.|+||++|++.+|+|+.|.+++++++++|++++++
T Consensus 244 ~l~~~~~------------------~~-~~~t~~~~~i~g-G~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~- 302 (410)
T PRK06133 244 QLRDLGD------------------PA-KGTTLNWTVAKA-GTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN- 302 (410)
T ss_pred HHHhccC------------------CC-CCeEEEeeEEEC-CCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-
Confidence 9887643 11 256899999999 89999999999999999999999999999999999987
Q ss_pred HHHcCceEEEEEeccCCCccCCH---HHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEe
Q 016853 302 CEKRSVSCIVERKHDANAVMCDA---DLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCR 375 (381)
Q Consensus 302 ~~~~~~~v~~~~~~~~~~~~~~~---~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~ 375 (381)
+...+++++++....++++..++ ++++.+.+++++. +.. ..+....++++||+++++.. +|++++..|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~-----~~~~~~~~~g~tDa~~~~~~gip~v~~g~G 374 (410)
T PRK06133 303 KLVPDTEVTLRFERGRPPLEANAASRALAEHAQGIYGEL-GRR-----LEPIDMGTGGGTDAAFAAGSGKAAVLEGFG 374 (410)
T ss_pred cCCCCeEEEEEeccccCCcccCcchHHHHHHHHHHHHHc-CCC-----ccccccCCCCCchHHHHHhcCCCceEeccc
Confidence 33456777777666677765433 4555555555442 221 11111345689999999987 888875433
No 27
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=8.1e-37 Score=294.01 Aligned_cols=284 Identities=23% Similarity=0.207 Sum_probs=215.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC-------------CCCcChHHHH
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------GIFDGSLGII 67 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------g~~D~k~gia 67 (381)
+|++|.++++||.++|+++||+++++..++....+.+ ++|+|+|+|||||||.. |++|||++++
T Consensus 17 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~---~~~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg~~a 93 (347)
T PRK08652 17 PSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVVN---SKAELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKGGVA 93 (347)
T ss_pred CCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEcC---CCCEEEEEccccccCCCCCCEEECCEEEeccchhhhHHHH
Confidence 4789999999999999999999887654432222212 25899999999999962 7899999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhh
Q 016853 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESL 147 (381)
Q Consensus 68 a~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~ 147 (381)
++|.|+++|++. .++++|.++|++|||.++ .|++.++..
T Consensus 94 ~~l~a~~~l~~~----~~~~~v~~~~~~dEE~g~-----~G~~~~~~~-------------------------------- 132 (347)
T PRK08652 94 AILLALEELGKE----FEDLNVGIAFVSDEEEGG-----RGSALFAER-------------------------------- 132 (347)
T ss_pred HHHHHHHHHhhc----ccCCCEEEEEecCcccCC-----hhHHHHHHh--------------------------------
Confidence 999999999865 346799999999999853 588876521
Q ss_pred hhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 016853 148 LQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLC 227 (381)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~ 227 (381)
+.+|. + ++.+|+ ...+..+++|..+++|+++|+++|++. | +.|.||+..+++++.+|+++.
T Consensus 133 ----~~~d~--~---i~~ep~--------~~~i~~~~~g~~~~~i~~~G~~~H~s~-p-~~g~nAi~~~a~~i~~l~~~~ 193 (347)
T PRK08652 133 ----YRPKM--A---IVLEPT--------DLKVAIAHYGNLEAYVEVKGKPSHGAC-P-ESGVNAIEKAFEMLEKLKELL 193 (347)
T ss_pred ----cCCCE--E---EEecCC--------CCceeeecccEEEEEEEEEeeecccCC-C-CcCcCHHHHHHHHHHHHHHHH
Confidence 11221 1 344442 123667899999999999999999886 9 699999999999999998875
Q ss_pred cCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCc
Q 016853 228 KHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 307 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~ 307 (381)
..... .. ..+++++.+++ |...|+||++|++++|+|++|.++.+++.++|+++++. +++
T Consensus 194 ~~~~~--------------~~--~~~~~~~~i~g-g~~~nviP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v 252 (347)
T PRK08652 194 KALGK--------------YF--DPHIGIQEIIG-GSPEYSIPALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTV 252 (347)
T ss_pred Hhhhc--------------cc--CCCCcceeeec-CCCCCccCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCc
Confidence 42110 11 12456677898 89999999999999999999999999999999988853 455
Q ss_pred eEEEEEeccCCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEeeC
Q 016853 308 SCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRLN 377 (381)
Q Consensus 308 ~v~~~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~~~ 377 (381)
++++.......+..+++++++.+.+++++. |.+ +....++|+||+++|++. +|++ .|.|+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~-------~~~~~~~g~tDa~~~~~~gip~v-~~Gpg~ 314 (347)
T PRK08652 253 KYEYTEIWDGFELDEDEEIVQLLEKAMKEV-GLE-------PEFTVMRSWTDAINFRYNGTKTV-VWGPGE 314 (347)
T ss_pred eEEEeccCCcccCCCCCHHHHHHHHHHHHh-CCC-------CCcCcCCccchhHHHHHCCCCEE-EECCCc
Confidence 555432212223456889999999999988 653 222234588999999887 8986 566654
No 28
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=1.8e-36 Score=294.19 Aligned_cols=285 Identities=20% Similarity=0.163 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHcCCEEEEcC----C-CCEEEEecCCCCCCCeEEEeecccCCcCC------------------CCCcC
Q 016853 6 VRAGNLIRQWMEDAGLRTWVDH----L-GNVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIFDG 62 (381)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~~----~-gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------g~~D~ 62 (381)
.++++||.++|+++|++++... . .|+++++++..+++|+|+|+|||||||+. |+.||
T Consensus 34 ~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~ 113 (376)
T PRK07473 34 NRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDM 113 (376)
T ss_pred HHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhc
Confidence 3778899999999999987643 2 26889886533346899999999999642 67799
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCCh
Q 016853 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDI 142 (381)
Q Consensus 63 k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~ 142 (381)
|+|++++|+|+++|++.++ .++++|.++|++|||.++ .|++.++. +..
T Consensus 114 Kgglaa~l~A~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~g~~~~~~----------------------~~~--- 161 (376)
T PRK07473 114 KGGNYLALEAIRQLARAGI--TTPLPITVLFTPDEEVGT-----PSTRDLIE----------------------AEA--- 161 (376)
T ss_pred hHHHHHHHHHHHHHHHcCC--CCCCCEEEEEeCCcccCC-----ccHHHHHH----------------------Hhh---
Confidence 9999999999999999886 677899999999999853 57877641 000
Q ss_pred hhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHH
Q 016853 143 AEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVL 222 (381)
Q Consensus 143 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~ 222 (381)
..+|.+ +..|++ ....+++.+++|..+++|+++|+++|+|..| +.|.||+..+++++.+
T Consensus 162 ---------~~~d~~-----iv~ep~------~~~~~v~~~~~G~~~~~v~~~G~~aHag~~p-~~g~nAi~~~~~~i~~ 220 (376)
T PRK07473 162 ---------ARNKYV-----LVPEPG------RPDNGVVTGRYAIARFNLEATGRPSHAGATL-SEGRSAIREMARQILA 220 (376)
T ss_pred ---------ccCCEE-----EEeCCC------CCCCCEEEECeeeEEEEEEEEeEcCCCCCCc-ccCcCHHHHHHHHHHH
Confidence 011211 233332 1223578899999999999999999997669 6899999999999999
Q ss_pred HHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHH
Q 016853 223 LERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQIC 302 (381)
Q Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~ 302 (381)
|+++.. ...++|++.|++ |.+.|+||++|++++++|....++.+++.+++.+.++
T Consensus 221 l~~~~~---------------------~~~~~~vg~i~g-g~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~--- 275 (376)
T PRK07473 221 IDAMTT---------------------EDCTFSVGIVHG-GQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG--- 275 (376)
T ss_pred HHHhcC---------------------CCceEeEeeEEc-CCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---
Confidence 988643 135889999999 8999999999999999999888777777766655543
Q ss_pred HHcCceEEEEEeccCCCccC---CHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEee
Q 016853 303 EKRSVSCIVERKHDANAVMC---DADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 303 ~~~~~~v~~~~~~~~~~~~~---~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~~ 376 (381)
...+++++++.....|++.. ++++++++.++.+. .|. ++....++++||+++|+.. +|++..|.|.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~-------~~~~~~~~g~tDa~~~~~~giP~v~g~Gpg 345 (376)
T PRK07473 276 TEDDVTFTVTRGVTRPVWEPDAGTMALYEKARAIAGQ-LGL-------SLPHGSAGGGSDGNFTGAMGIPTLDGLGVR 345 (376)
T ss_pred cCCCeEEEEEccccCCCCCCChhHHHHHHHHHHHHHH-cCC-------CCccccCccccHhhhHHhcCCCEEEeccCC
Confidence 23455565543334555532 23577777666544 343 2334467799999999876 9998756664
No 29
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=7.2e-37 Score=302.26 Aligned_cols=312 Identities=22% Similarity=0.214 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcC----CCCEEEEecCCCCCCCeEEEeecccCCcCC---------------------
Q 016853 3 PASVRAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~----~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------------- 57 (381)
++|.++++||.++|+++||++++++ .+|++++++|..++.|+|+|++||||||.+
T Consensus 22 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGr 101 (426)
T PRK07906 22 KGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGR 101 (426)
T ss_pred chHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEec
Confidence 6899999999999999999987654 469999998764445899999999999862
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHH
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~ 137 (381)
|+.|||++++++|+|+++|++.++ .++++|.++|++|||.++ ..|++.+...... .
T Consensus 102 G~~D~Kg~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~----~~g~~~l~~~~~~-~----------------- 157 (426)
T PRK07906 102 GAVDMKDMDAMMLAVVRHLARTGR--RPPRDLVFAFVADEEAGG----TYGAHWLVDNHPE-L----------------- 157 (426)
T ss_pred CccccchHHHHHHHHHHHHHHcCC--CCCccEEEEEecCcccch----hhhHHHHHHHHHH-h-----------------
Confidence 777999999999999999999987 789999999999999862 4588877521100 0
Q ss_pred CCCChhhhhhhhccCCCccchheeeecccCCcccc--cCC-CcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHH
Q 016853 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLE--WVG-FPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (381)
Q Consensus 138 ~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~-~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~ 214 (381)
+ +.... +..|++.... ..+ ....+..+++|..+++|+++|+++|+|+ | .. .||+.
T Consensus 158 --------------~--~~~~~---ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~-p-~~-~nAi~ 215 (426)
T PRK07906 158 --------------F--EGVTE---AISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSM-V-ND-DNAVT 215 (426)
T ss_pred --------------c--cchhe---EEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCC-C-CC-CCHHH
Confidence 0 00000 0112211100 011 1123667899999999999999999998 7 44 99999
Q ss_pred HHHHHHHHHHHHhcCCC------------C---ccccCCCCC-C--ccc---ccC---CCCeEEEEEEEEecCCCCceeC
Q 016853 215 AAAELIVLLERLCKHPK------------D---FLSYDGRSN-C--STL---ESL---SSSLVCTVGEISSWPSASNVIP 270 (381)
Q Consensus 215 ~~~~~i~~l~~~~~~~~------------~---~~~~~~~~~-~--~~~---~p~---~~~~ti~~~~i~g~g~~~NvIP 270 (381)
.++++|.+|+++..+.. . ..+++.... . ... ++. ...+++|++.|+| |.+.|+||
T Consensus 216 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~g-G~~~NviP 294 (426)
T PRK07906 216 RLAEAVARIGRHRWPLVLTPTVRAFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKA-GYKVNVIP 294 (426)
T ss_pred HHHHHHHHHHhCCCCcccCHHHHHHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEec-cCccccCC
Confidence 99999999976422100 0 000000000 0 000 000 0146999999999 88999999
Q ss_pred CeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcc
Q 016853 271 GEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTGATQHE 348 (381)
Q Consensus 271 ~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~ 348 (381)
++|++.+|+|++|+.+ +++.+.|++++. ..+++++....+++ ..++++++.+.+++++.++.. ..
T Consensus 295 ~~~~~~~d~R~~p~~~-~~i~~~i~~~~~-------~~v~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~~~~-----~~ 361 (426)
T PRK07906 295 GTAEAVVDGRFLPGRE-EEFLATVDELLG-------PDVEREWVHRDPALETPFDGPLVDAMNAALLAEDPGA-----RV 361 (426)
T ss_pred CceEEEEEEeECCCCc-HHHHHHHHHHhC-------CCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHCCCC-----eE
Confidence 9999999999999886 566666655442 23444443344543 467889999999999875321 11
Q ss_pred cccccCcccHHHHHHhhh-cCeEEEEEee
Q 016853 349 IPVIMSGAGHDAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 349 ~~~~~~~g~tD~~~~~~~-~p~~~~~~~~ 376 (381)
.+. ..+|+||+++|+.. +|+ +.|+|+
T Consensus 362 ~~~-~~~ggtDa~~~~~~g~p~-~~~gp~ 388 (426)
T PRK07906 362 VPY-MLSGGTDAKAFSRLGIRC-YGFAPL 388 (426)
T ss_pred eee-eecccCcHHHHHhcCCce-EEEecc
Confidence 222 34578999999987 665 467775
No 30
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.1e-36 Score=296.10 Aligned_cols=296 Identities=24% Similarity=0.267 Sum_probs=224.7
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcCCC------------CEEEEecCCCCCCCeEEEeecccCCcCC-------------
Q 016853 3 PASVRAGNLIRQWMEDAGLRTWVDHLG------------NVHGRVEGLNASAQALLIGSHLDTVVDA------------- 57 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~~g------------nv~a~~~g~~~~~~~i~l~~H~DtVp~~------------- 57 (381)
.+|.++++||.++|+++||+++++..+ |+++.. +. +.|+|+|+|||||||.+
T Consensus 26 ~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~ill~~HlDtvp~~~~~~~~~Pf~~~~ 102 (394)
T PRK08651 26 ENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARR-GS--GNPHLHFNGHYDVVPPGEGWSVNVPFEPKV 102 (394)
T ss_pred cCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEe-CC--CCceEEEEeeeeeecCCCCccccCCCCcEE
Confidence 467899999999999999998765433 245654 33 34899999999999863
Q ss_pred --------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCC
Q 016853 58 --------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGV 129 (381)
Q Consensus 58 --------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~ 129 (381)
|..|||++++++|+|+++|++. . +++|.++|+++||+++ .|++.+....
T Consensus 103 ~~~~~~grG~~D~k~~~~~~l~a~~~l~~~----~-~~~v~~~~~~~EE~g~-----~G~~~~~~~~------------- 159 (394)
T PRK08651 103 KDGKVYGRGASDMKGGIAALLAAFERLDPA----G-DGNIELAIVPDEETGG-----TGTGYLVEEG------------- 159 (394)
T ss_pred ECCEEEecCccccchHHHHHHHHHHHHHhc----C-CCCEEEEEecCccccc-----hhHHHHHhcc-------------
Confidence 5579999999999999999875 3 7999999999999852 5888775210
Q ss_pred cHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCC
Q 016853 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMR 209 (381)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g 209 (381)
.+++|.+ +..++ .+. ..+..+++|..+++|+++|+++|++. | +.|
T Consensus 160 ---------------------~~~~d~~-----i~~~~------~~~-~~i~~~~~G~~~~~i~v~G~~~H~~~-p-~~g 204 (394)
T PRK08651 160 ---------------------KVTPDYV-----IVGEP------SGL-DNICIGHRGLVWGVVKVYGKQAHAST-P-WLG 204 (394)
T ss_pred ---------------------CCCCCEE-----EEecC------CCC-CceEEecccEEEEEEEEEEeccccCC-C-ccc
Confidence 0111211 11121 111 13567899999999999999999997 9 699
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEE--EEecCCCCceeCCeEEEEEEeeCCChhHH
Q 016853 210 QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE--ISSWPSASNVIPGEVTFTVDLRAIDDAGR 287 (381)
Q Consensus 210 ~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~--i~g~g~~~NvIP~~a~~~~diR~~p~~~~ 287 (381)
.||+..+++++.+|++...+......+. ++.....+++++. |++ |.+.|+||++|++.+|+|++|..+.
T Consensus 205 ~nAi~~~~~~i~~l~~~~~~~~~~~~~~--------~~~~~~~~~~ig~~~i~g-G~~~nviP~~a~~~~diR~~~~~~~ 275 (394)
T PRK08651 205 INAFEAAAKIAERLKSSLSTIKSKYEYD--------DERGAKPTVTLGGPTVEG-GTKTNIVPGYCAFSIDRRLIPEETA 275 (394)
T ss_pred cCHHHHHHHHHHHHHHHHHhhhcccccc--------ccccCCCceeecceeeeC-CCCCCccCCEEEEEEEeeeCCCCCH
Confidence 9999999999999987643221100000 1222356788888 998 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCceEEEEEeccCCCcc--CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhh
Q 016853 288 ETVLYELSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH 365 (381)
Q Consensus 288 ~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~ 365 (381)
++++++|+++++.++..++++++++....++++. .++++++.+.+++++++|..+ ....++|+||+++|+.
T Consensus 276 e~i~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~~-------~~~~~~g~tD~~~~~~ 348 (394)
T PRK08651 276 EEVRDELEALLDEVAPELGIEVEFEITPFSEAFVTDPDSELVKALREAIREVLGVEP-------KKTISLGGTDARFFGA 348 (394)
T ss_pred HHHHHHHHHHHHHHhhccCCCeeEEEecccCCccCCCCCHHHHHHHHHHHHHhCCCC-------ceeeecCcccHHHHhh
Confidence 9999999999999888888777776655566654 456799999999999877542 2224568899999998
Q ss_pred h-cCeEEEEEee
Q 016853 366 L-TKVCSLLCRL 376 (381)
Q Consensus 366 ~-~p~~~~~~~~ 376 (381)
. +|++ .|.|+
T Consensus 349 ~gip~v-~~Gpg 359 (394)
T PRK08651 349 KGIPTV-VYGPG 359 (394)
T ss_pred CCCcEE-EECCC
Confidence 7 9996 44554
No 31
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=4.8e-36 Score=291.01 Aligned_cols=298 Identities=19% Similarity=0.149 Sum_probs=213.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCC---EEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGL---RTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~---~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------------- 57 (381)
.|++|.++++||.++|+++|+ +++.. ..|+++++.+ + .+|+|+|+|||||||.+
T Consensus 11 ~s~~e~~~~~~i~~~l~~~g~~~~~~~~~-~~nvva~~~~-~-~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~~~~~~~~ 87 (373)
T TIGR01900 11 PSDHEGPIADEIEAALNNLELEGLEVFRF-GDNVLARTDF-G-KASRVILAGHIDTVPIADNFPPKWLEPGDSLIREEIA 87 (373)
T ss_pred CCchHHHHHHHHHHHHhhccccCceEEEE-CCEEEEecCC-C-CCCeEEEeCccccccCCCCChhhhccCcccccccccc
Confidence 368899999999999999965 34332 2489999754 2 25899999999999741
Q ss_pred ------------CCCcChHHHHHHHHHHHHHHh--cCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCcccccc
Q 016853 58 ------------GIFDGSLGIITAISALKVLKS--TGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRV 123 (381)
Q Consensus 58 ------------g~~D~k~giaa~l~a~~~l~~--~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~ 123 (381)
|+.|||+|++++|+|+++|++ .+. .++++|.|+|++|||.++ +..|++.++....
T Consensus 88 ~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~--~~~~~i~~~~~~dEE~~~---~~~G~~~~~~~~~------ 156 (373)
T TIGR01900 88 HAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPET--ELKHDLTLIAYDCEEVAA---EKNGLGHIRDAHP------ 156 (373)
T ss_pred cccccCCEEEecCchhhhHHHHHHHHHHHHHhhhcccc--CCCCCEEEEEEecccccC---CCCCHHHHHHhCc------
Confidence 556999999999999999964 344 678999999999999852 1247777652100
Q ss_pred ccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCC
Q 016853 124 SDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGT 203 (381)
Q Consensus 124 ~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~ 203 (381)
. .+++|.+ +..|+ ....+..+++|..+++|+++|+++|+|.
T Consensus 157 ---------------~-----------~~~~d~~-----iv~Ep--------t~~~i~~g~~G~~~~~i~v~G~~~H~s~ 197 (373)
T TIGR01900 157 ---------------D-----------WLAADFA-----IIGEP--------TGGGIEAGCNGNIRFDVTAHGVAAHSAR 197 (373)
T ss_pred ---------------c-----------cccCCEE-----EEECC--------CCCcccccceeeEEEEEEEEeeccccCC
Confidence 0 0112211 11222 2234667899999999999999999997
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCC
Q 016853 204 VPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAID 283 (381)
Q Consensus 204 ~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p 283 (381)
| +.|.||+..+++++.+|+++...... .++.....++|++.|+| |.+.|+||++|++++|+|+.|
T Consensus 198 -p-~~g~NAi~~~~~~i~~l~~l~~~~~~------------~~~~~~~~t~~v~~I~G-G~~~nvVP~~a~~~~diR~~p 262 (373)
T TIGR01900 198 -A-WLGDNAIHKAADIINKLAAYEAAEVN------------IDGLDYREGLNATFCEG-GKANNVIPDEARMHLNFRFAP 262 (373)
T ss_pred -C-CCCCCHHHHHHHHHHHHHHhhccccc------------ccCCcccceEEEEEEeC-CCCCcccCCeEEEEEEEecCC
Confidence 9 79999999999999999886532110 01111246899999999 899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHH--------HHHHc---C-ceEEEEEeccCCC--ccCCHHHHHHHHHHHHHHHhhccCCCCccc
Q 016853 284 DAGRETVLYELSNQLYQ--------ICEKR---S-VSCIVERKHDANA--VMCDADLSSQLKSASYAALKRMTGATQHEI 349 (381)
Q Consensus 284 ~~~~~~~~~~i~~~~~~--------~~~~~---~-~~v~~~~~~~~~~--~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~ 349 (381)
+++.++++++|+++++. +.... + .+++++.....++ ...++++++.+.++++++++..|
T Consensus 263 ~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------- 335 (373)
T TIGR01900 263 DKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMEDEAGGALPGLGAPLAQDLIDAVGEEKGRDP------- 335 (373)
T ss_pred CcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEcccCCCCCCCCCCHHHHHHHHHHHhccCCCc-------
Confidence 99999999999766432 22211 1 1233333222222 23567889999999999876542
Q ss_pred ccccCcccHHHHHHhhh-cCeEEEEEee
Q 016853 350 PVIMSGAGHDAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 350 ~~~~~~g~tD~~~~~~~-~p~~~~~~~~ 376 (381)
.. ..|+||+++|... +|++. |.|.
T Consensus 336 ~~--~~g~tD~~~~~~~gip~v~-~Gpg 360 (373)
T TIGR01900 336 LA--KFGWTDVARFSALGIPALN-FGAG 360 (373)
T ss_pred cc--ccCCccHHHHHhcCCCEEE-eCCC
Confidence 22 3477999999876 89985 5554
No 32
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.8e-36 Score=292.73 Aligned_cols=295 Identities=20% Similarity=0.223 Sum_probs=216.7
Q ss_pred CHHH-HHHHHHHHHHHHHcCCEEEEc-----CCCCEEEEecCCCCCCCeEEEeecccCCcCC------------------
Q 016853 2 SPAS-VRAGNLIRQWMEDAGLRTWVD-----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------ 57 (381)
Q Consensus 2 s~~E-~~~~~~l~~~l~~~G~~~~~~-----~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------ 57 (381)
|++| .++++||.++|+++|+++++. ..+|+++++++. .+|+|+|+|||||||.+
T Consensus 20 s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~--~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i 97 (385)
T PRK07522 20 SRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPA--DRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRL 97 (385)
T ss_pred CCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCC--CCCeEEEEeecccccCCCCCCCCCCCceEEECCEE
Confidence 5566 499999999999999998653 236899999653 25899999999999852
Q ss_pred ---CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHH
Q 016853 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (381)
Q Consensus 58 ---g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~ 134 (381)
|+.|||++++++|+|+++|++.+ ++++|.|+|++|||.++ .|++.+.....
T Consensus 98 ~GrG~~D~Kg~~a~~l~a~~~l~~~~----~~~~i~~~~~~dEE~g~-----~G~~~l~~~~~----------------- 151 (385)
T PRK07522 98 YGRGTCDMKGFIAAALAAVPELAAAP----LRRPLHLAFSYDEEVGC-----LGVPSMIARLP----------------- 151 (385)
T ss_pred EeccccccchHHHHHHHHHHHHHhCC----CCCCEEEEEEeccccCC-----ccHHHHHHHhh-----------------
Confidence 77899999999999999998864 57899999999999752 58888752110
Q ss_pred HHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHH
Q 016853 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (381)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~ 214 (381)
+. .+++|.+. ..+ +....++.+++|..+++|+++|+++|+|. | ..|.||+.
T Consensus 152 --~~------------~~~~d~~i-----~~e--------p~~~~~~~~~~G~~~~~i~v~G~~~Hs~~-p-~~g~nAi~ 202 (385)
T PRK07522 152 --ER------------GVKPAGCI-----VGE--------PTSMRPVVGHKGKAAYRCTVRGRAAHSSL-A-PQGVNAIE 202 (385)
T ss_pred --hc------------CCCCCEEE-----Ecc--------CCCCeeeeeecceEEEEEEEEeeccccCC-C-ccCcCHHH
Confidence 00 01122211 111 12234677899999999999999999997 7 68999999
Q ss_pred HHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHH
Q 016853 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (381)
Q Consensus 215 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i 294 (381)
.+++++.+|+++..+....-+.+..+ ++ +.++++++.|++ |...|+||++|++.+|+|+.|.++.++++++|
T Consensus 203 ~~~~~i~~l~~~~~~~~~~~~~~~~~-----~~--~~~t~~i~~i~g-G~~~nviP~~a~~~~diR~~~~~~~~~i~~~i 274 (385)
T PRK07522 203 YAARLIAHLRDLADRLAAPGPFDALF-----DP--PYSTLQTGTIQG-GTALNIVPAECEFDFEFRNLPGDDPEAILARI 274 (385)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcCC-----CC--CcceeEEeeeec-CccccccCCceEEEEEEccCCCCCHHHHHHHH
Confidence 99999999998753210000000000 00 136899999999 89999999999999999999999999999999
Q ss_pred HHHHHH------HHHHcCceEEEEEeccCCCccC--CHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh
Q 016853 295 SNQLYQ------ICEKRSVSCIVERKHDANAVMC--DADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL 366 (381)
Q Consensus 295 ~~~~~~------~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~ 366 (381)
++++++ .+..++++++++....++++.. ++++++.+++ +.+..+ .. ...++||+++|+..
T Consensus 275 ~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~~~------~~--~~~~~td~~~~~~~ 342 (385)
T PRK07522 275 RAYAEAELLPEMRAVHPEAAIEFEPLSAYPGLDTAEDAAAARLVRA----LTGDND------LR--KVAYGTEAGLFQRA 342 (385)
T ss_pred HHHHHhhcchhhhhhcCCCcEEEEeccCCCCCCCCCCcHHHHHHHH----HhCCCC------cc--eEeeecchHHhccC
Confidence 999987 2344677777766656777654 4667766554 444321 11 23377999999876
Q ss_pred -cCeEEEE
Q 016853 367 -TKVCSLL 373 (381)
Q Consensus 367 -~p~~~~~ 373 (381)
+|++.++
T Consensus 343 gip~v~~G 350 (385)
T PRK07522 343 GIPTVVCG 350 (385)
T ss_pred CCCEEEEC
Confidence 8987543
No 33
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=5e-36 Score=299.81 Aligned_cols=314 Identities=18% Similarity=0.181 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHHHHHcCCEEE---Ec----CCCCEEEEecCCCCCCCeEEEeecccCCcCC------------------
Q 016853 3 PASVRAGNLIRQWMEDAGLRTW---VD----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------ 57 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~---~~----~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------ 57 (381)
++|.++++||.++|+++||+++ .+ ..+|++++++|..+ +++|+|+|||||||.+
T Consensus 56 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~-~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~i 134 (472)
T PRK09133 56 GSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDP-KKPILLLAHMDVVEAKREDWTRDPFKLVEENGYF 134 (472)
T ss_pred cchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCC-CCcEEEEeecccCCCChhcCCCCCCcceEeCCEE
Confidence 5789999999999999999753 22 24689999977653 4899999999999953
Q ss_pred ---CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHH
Q 016853 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (381)
Q Consensus 58 ---g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~ 134 (381)
|+.|||++++++|+|+++|++.+. .++++|.++|++|||.+ |..|++.+......
T Consensus 135 yGRGa~D~Kg~~aa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~~----g~~G~~~l~~~~~~---------------- 192 (472)
T PRK09133 135 YGRGTSDDKADAAIWVATLIRLKREGF--KPKRDIILALTGDEEGT----PMNGVAWLAENHRD---------------- 192 (472)
T ss_pred EecCcccchHHHHHHHHHHHHHHhcCC--CCCCCEEEEEECccccC----ccchHHHHHHHHhh----------------
Confidence 677999999999999999999886 78899999999999943 34688877521000
Q ss_pred HHHCCCChhhhhhhhccCCCccchheeeecccCCccc-c--cCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCC
Q 016853 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVL-E--WVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 211 (381)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~--~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~N 211 (381)
.++++. + +. |++... . .++....+..|+||..+++|+++|+++|||. | + +.|
T Consensus 193 ----------------~~~~~~--~---i~-e~~~~~~~~~gept~~~i~~g~kG~~~~~i~v~G~~~Hss~-p-~-~~n 247 (472)
T PRK09133 193 ----------------LIDAEF--A---LN-EGGGGTLDEDGKPVLLTVQAGEKTYADFRLEVTNPGGHSSR-P-T-KDN 247 (472)
T ss_pred ----------------ccCeEE--E---EE-CCCccccCCCCCceEEEeeeecceeEEEEEEEecCCCCCCC-C-C-CCC
Confidence 011111 1 22 332100 0 0111223557899999999999999999997 8 4 489
Q ss_pred HHHHHHHHHHHHHHHhcCCCC-ccc---------cCCC------------CC------CcccccC---CCCeEEEEEEEE
Q 016853 212 PMTAAAELIVLLERLCKHPKD-FLS---------YDGR------------SN------CSTLESL---SSSLVCTVGEIS 260 (381)
Q Consensus 212 Ai~~~~~~i~~l~~~~~~~~~-~~~---------~~~~------------~~------~~~~~p~---~~~~ti~~~~i~ 260 (381)
||..++++|.+|+++..+... .+. +... .. ....++. ...+++|++.|+
T Consensus 248 Ai~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~ 327 (472)
T PRK09133 248 AIYRLAAALSRLAAYRFPVMLNDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLE 327 (472)
T ss_pred hHHHHHHHHHHHhhCCCCCccCCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEe
Confidence 999999999999864211000 000 0000 00 0000111 135799999999
Q ss_pred ecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEec-cCCCccCCHHHHHHHHHHHHHHH-
Q 016853 261 SWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKH-DANAVMCDADLSSQLKSASYAAL- 338 (381)
Q Consensus 261 g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~l~~a~~~~~- 338 (381)
+ |...|+||++|++.+|+|++|+++.+++.++|+++++. .++++++.... ..++.+.++++++.+.+++++.+
T Consensus 328 g-G~~~NvVP~~a~~~lDiR~~p~~~~e~v~~~I~~~i~~----~~v~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 402 (472)
T PRK09133 328 G-GHAENALPQRATANVNCRIFPGDTIEAVRATLKQVVAD----PAIKITRIGDPSPSPASPLRPDIMKAVEKLTAAMWP 402 (472)
T ss_pred c-CCcCccCCCceEEEEEEEeCCchhHHHHHHHHHHHhcC----CCEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHHCC
Confidence 9 89999999999999999999999999999999988753 24444322111 12234567789999999888876
Q ss_pred hhccCCCCcccccccCcccHHHHHHhhh-cCeEE---EEEee
Q 016853 339 KRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCS---LLCRL 376 (381)
Q Consensus 339 g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~---~~~~~ 376 (381)
|. .+....++|+||++++... +|++. +|+|.
T Consensus 403 g~-------~~~~~~~~ggtDa~~~~~~gip~~~~~~i~gp~ 437 (472)
T PRK09133 403 GV-------PVIPSMSTGATDGRYLRAAGIPTYGVSGLFGDP 437 (472)
T ss_pred CC-------ceeccccccccchHHHHhcCCCceeecCcccCc
Confidence 32 1223345688999999876 88863 35543
No 34
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=2.1e-35 Score=290.24 Aligned_cols=288 Identities=17% Similarity=0.138 Sum_probs=219.8
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcCCCCEEEEecCCC-CCCCeEEEeecccCCcCC-----------------------
Q 016853 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLN-ASAQALLIGSHLDTVVDA----------------------- 57 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-~~~~~~gnv~a~~~g~~-~~~~~i~l~~H~DtVp~~----------------------- 57 (381)
.+|.++++||.++|+++|++ ++++..+|+++.++|+. ++.|+|+|+|||||||..
T Consensus 29 ~~~~~~a~~l~~~l~~~G~~~~~~~~~~~v~~~~~g~~~~~~~~i~l~~H~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~ 108 (408)
T PRK05469 29 EGQWDLAKLLVEELKELGLQDVTLDENGYVMATLPANVDKDVPTIGFIAHMDTAPDFSGKNVKPQIIENYDGGDIALGDG 108 (408)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEECCCeEEEEEecCCCCCCCCeEEEEEeccCCCCCCCCCCCCEEeccCCCcceecCCC
Confidence 45899999999999999996 77888889999998752 246999999999999640
Q ss_pred ------------------------CC----CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcch
Q 016853 58 ------------------------GI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGS 109 (381)
Q Consensus 58 ------------------------g~----~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs 109 (381)
|. .|||+|+|++|+|+++|++.+. .++++|.|+|++|||++ .|+
T Consensus 109 ~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~--~~~g~v~~~f~~dEE~g------~Ga 180 (408)
T PRK05469 109 NEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE--IKHGDIRVAFTPDEEIG------RGA 180 (408)
T ss_pred ceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC--CCCCCEEEEEecccccC------CCH
Confidence 33 8999999999999999998864 57899999999999974 378
Q ss_pred HHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceE
Q 016853 110 AALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTR 189 (381)
Q Consensus 110 ~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 189 (381)
+.+.. . .+..+. + +|++++ ..+ .+..+.+|..+
T Consensus 181 ~~~~~--~---------------------------------~~~~~~--~---~~~~~~----~~g---~~~~~~~g~~~ 213 (408)
T PRK05469 181 DKFDV--E---------------------------------KFGADF--A---YTVDGG----PLG---ELEYENFNAAS 213 (408)
T ss_pred HHhhh--h---------------------------------hcCCcE--E---EEecCC----Ccc---eEEeccCceeE
Confidence 76630 0 000111 1 233221 111 13445789999
Q ss_pred EEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCcee
Q 016853 190 LKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVI 269 (381)
Q Consensus 190 ~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvI 269 (381)
++|+++|+++|++..| +.|.|||..+++++.+|+.+..... +.....+++++.+++ |
T Consensus 214 ~~i~v~Gk~~Ha~~~p-~~g~nAi~~~~~~i~~l~~~~~~~~---------------~~~~~~~i~~g~i~g-g------ 270 (408)
T PRK05469 214 AKITIHGVNVHPGTAK-GKMVNALLLAADFHAMLPADETPET---------------TEGYEGFYHLTSIKG-T------ 270 (408)
T ss_pred EEEEEeeecCCCCCCc-ccccCHHHHHHHHHHhCCCCCCCCC---------------CCCceEEEEEEEEEE-c------
Confidence 9999999999987668 6999999999999988775432110 111134578888887 4
Q ss_pred CCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHc-CceEEEEEeccCC----CccCCHHHHHHHHHHHHHHHhhccCC
Q 016853 270 PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKR-SVSCIVERKHDAN----AVMCDADLSSQLKSASYAALKRMTGA 344 (381)
Q Consensus 270 P~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~-~~~v~~~~~~~~~----~~~~~~~~~~~l~~a~~~~~g~~~~~ 344 (381)
|++|++++|+|+.+.++.+.++++|++++++++..+ ++++++++...++ ++.+++++++.+.+++++. |..
T Consensus 271 p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~--- 346 (408)
T PRK05469 271 VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAKYGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIE--- 346 (408)
T ss_pred cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCC---
Confidence 799999999999999999999999999999988777 5677776553332 4668899999999999874 532
Q ss_pred CCcccccccCcccHHHHHHhhh-cCeEEEEEee
Q 016853 345 TQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 345 ~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~~ 376 (381)
+...++++++|+++|+.. +|+++++.|+
T Consensus 347 ----~~~~~~~ggtD~~~~~~~giP~v~~gpG~ 375 (408)
T PRK05469 347 ----PIIKPIRGGTDGSQLSFMGLPCPNIFTGG 375 (408)
T ss_pred ----cEEecCCCcccHHHHhhCCCceEEECcCc
Confidence 223345688999999876 9999877654
No 35
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=1.1e-35 Score=287.97 Aligned_cols=289 Identities=22% Similarity=0.234 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcC------CCCEEEEecCCCCCCCeEEEeecccCCcCC---------------------
Q 016853 5 SVRAGNLIRQWMEDAGLRTWVDH------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (381)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------------- 57 (381)
|.++++||.++|+++|+++++++ .+|+++.+.++ ++|+|+|+|||||||.+
T Consensus 17 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~--~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~Gr 94 (364)
T TIGR01892 17 NVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPS--GAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGR 94 (364)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCC--CCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEec
Confidence 47999999999999999987653 36899999553 35899999999999862
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHH
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~ 137 (381)
|+.|||++++++|+|+++|++.+ ++++|.|+|+++||.+ ..|++.++...
T Consensus 95 G~~D~Kg~~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~g-----~~G~~~~~~~~--------------------- 144 (364)
T TIGR01892 95 GTCDMKGFLACALAAAPDLAAEQ----LKKPLHLALTADEEVG-----CTGAPKMIEAG--------------------- 144 (364)
T ss_pred CccccchHHHHHHHHHHHHHhcC----cCCCEEEEEEeccccC-----CcCHHHHHHhc---------------------
Confidence 67899999999999999998764 5789999999999985 35888875210
Q ss_pred CCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 016853 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (381)
Q Consensus 138 ~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~ 217 (381)
.+++|.+ +..++ ....++.+++|..+++|+++|+++|+|. | +.|.||+..++
T Consensus 145 -------------~~~~d~~-----i~~ep--------~~~~~~~~~~G~~~~~v~v~G~~~Hs~~-p-~~g~nAi~~~~ 196 (364)
T TIGR01892 145 -------------AGRPRHA-----IIGEP--------TRLIPVRAHKGYASAEVTVRGRSGHSSY-P-DSGVNAIFRAG 196 (364)
T ss_pred -------------CCCCCEE-----EECCC--------CCceeEEeeceEEEEEEEEEcccccccC-C-ccCcCHHHHHH
Confidence 0112211 11121 1223455789999999999999999996 9 69999999999
Q ss_pred HHHHHHHHHhcCCCCccccCCCCCCcccccCC-CCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHH
Q 016853 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLS-SSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSN 296 (381)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~ 296 (381)
+++.+|+++....... ... .+.. ..++++++.|++ |...|+||++|++.+|+|++|.++.++++++|++
T Consensus 197 ~~i~~l~~~~~~~~~~-~~~--------~~~~~~~~~~~i~~i~g-g~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~ 266 (364)
T TIGR01892 197 RFLQRLVHLADTLLRE-DLD--------EGFTPPYTTLNIGVIQG-GKAVNIIPGACEFVFEWRPIPGMDPEELLQLLET 266 (364)
T ss_pred HHHHHHHHHHHHhccC-CCC--------ccCCCCCceEEEeeeec-CCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHH
Confidence 9999998764321000 000 0110 246999999999 8999999999999999999999999999999999
Q ss_pred HHHHHHH-HcCceEEEEEeccCCCcc--CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEE
Q 016853 297 QLYQICE-KRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSL 372 (381)
Q Consensus 297 ~~~~~~~-~~~~~v~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~ 372 (381)
+++..+. .++++++++....+|++. .++++++.+.+ +++.. +.. .+++||+++|... +|++ .
T Consensus 267 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~~-------~~~--~~~~tD~~~~~~~gip~v-~ 332 (364)
T TIGR01892 267 IAQALVRDEPGFEVQIEVVSTDPGVNTEPDAELVAFLEE----LSGNA-------PEV--VSYGTEAPQFQELGAEAV-V 332 (364)
T ss_pred HHHHHHhhCCCceEEEEEccCCCCcCCCCCCHHHHHHHH----HhCCC-------Cce--ecccccHHHHHhCCCcEE-E
Confidence 9987653 456777776655566653 55677777654 44432 222 2367999999887 9976 4
Q ss_pred EEeeC
Q 016853 373 LCRLN 377 (381)
Q Consensus 373 ~~~~~ 377 (381)
|.|..
T Consensus 333 ~Gpg~ 337 (364)
T TIGR01892 333 CGPGD 337 (364)
T ss_pred ECCCC
Confidence 55543
No 36
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=1e-35 Score=291.57 Aligned_cols=295 Identities=20% Similarity=0.199 Sum_probs=219.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEE-EEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC----------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRT-WVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~-~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------------- 57 (381)
+|++|.++++||.++|+++||++ +.+..+|+++++.+. .|+|+|++||||||.+
T Consensus 30 ~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~---~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGr 106 (399)
T PRK13004 30 ESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHG---KKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGR 106 (399)
T ss_pred CCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCC---CcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeC
Confidence 47889999999999999999984 456678999998552 3899999999999963
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHH
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~ 137 (381)
|..|||++++++|+|+++|++.++ .++++|.++|++|||.++ -.|++.++. +
T Consensus 107 G~~D~Kg~~aa~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~~~----g~~~~~~~~----------------------~ 158 (399)
T PRK13004 107 GTSDQKGGMASMVYAAKIIKDLGL--DDEYTLYVTGTVQEEDCD----GLCWRYIIE----------------------E 158 (399)
T ss_pred CccccchHHHHHHHHHHHHHhcCC--CCCCeEEEEEEcccccCc----chhHHHHHH----------------------h
Confidence 566999999999999999999986 789999999999999742 134555431 0
Q ss_pred CCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 016853 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (381)
Q Consensus 138 ~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~ 217 (381)
. .+.+|.+. ..++ ....+..+++|..+++|+++|+++|+|. | +.|.||+..++
T Consensus 159 ~------------~~~~d~~i-----~~e~--------~~~~i~~~~~G~~~~~v~v~G~~~Ha~~-p-~~g~nAi~~~~ 211 (399)
T PRK13004 159 D------------KIKPDFVV-----ITEP--------TDLNIYRGQRGRMEIRVETKGVSCHGSA-P-ERGDNAIYKMA 211 (399)
T ss_pred c------------CCCCCEEE-----EccC--------CCCceEEecceEEEEEEEEeccccccCC-C-CCCCCHHHHHH
Confidence 0 01122221 1122 2234677899999999999999999996 9 69999999999
Q ss_pred HHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHH
Q 016853 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQ 297 (381)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~ 297 (381)
+++.+|+.+...... ++..+..+++++.|.+++.+.|+||++|++.+|+|++|.+++++++++|+++
T Consensus 212 ~~i~~l~~~~~~~~~-------------~~~~~~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~ 278 (399)
T PRK13004 212 PILNELEELNPNLKE-------------DPFLGKGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRAL 278 (399)
T ss_pred HHHHHHHhhcccccc-------------CCcCCCceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHH
Confidence 999999987542100 1222456889999988446999999999999999999999999999999887
Q ss_pred HHHHHHHcCceEEEEE-------------eccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHH
Q 016853 298 LYQICEKRSVSCIVER-------------KHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMA 362 (381)
Q Consensus 298 ~~~~~~~~~~~v~~~~-------------~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~ 362 (381)
++. ...+.++++.. ...+|++ ..++++++.+.+++++++|.+| ......++||++.
T Consensus 279 ~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~a~~~~~g~~~-------~~~~~~~~td~~~ 349 (399)
T PRK13004 279 PAV--KKANAKVSMYNYDRPSYTGLVYPTECYFPTWLYPEDHEFVKAAVEAYKGLFGKAP-------EVDKWTFSTNGVS 349 (399)
T ss_pred Hhh--ccccceEEEecccCCCcccccccccccccccccCCCCHHHHHHHHHHHHHhCCCC-------eecccccccCCeE
Confidence 422 22344444321 1224554 3678899999999999987642 2223346788877
Q ss_pred Hhh-h-cCeEEEEEee
Q 016853 363 MSH-L-TKVCSLLCRL 376 (381)
Q Consensus 363 ~~~-~-~p~~~~~~~~ 376 (381)
+.+ . +|++. |.|.
T Consensus 350 ~~~~~Gip~v~-~Gpg 364 (399)
T PRK13004 350 IAGRAGIPTIG-FGPG 364 (399)
T ss_pred EehhcCCCEEE-ECCC
Confidence 753 4 89885 4443
No 37
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=1.8e-35 Score=291.64 Aligned_cols=299 Identities=17% Similarity=0.158 Sum_probs=221.3
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcC----CCCEEEEecCCCCC-CCeEEEeecccCCcCC--------------------
Q 016853 3 PASVRAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNAS-AQALLIGSHLDTVVDA-------------------- 57 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~----~gnv~a~~~g~~~~-~~~i~l~~H~DtVp~~-------------------- 57 (381)
++|.++++||.++|+++||++++++ ..|++++++|..++ .|+|+|+|||||||.+
T Consensus 33 ~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~ly 112 (421)
T PRK08596 33 RNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLY 112 (421)
T ss_pred hhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEE
Confidence 4788999999999999999987643 46899999775332 3689999999999853
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHH
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~ 135 (381)
|+.|||++++++|+|+++|++.++ .++++|.|+|++|||.++ .|+++++..
T Consensus 113 GrG~~D~Kgg~a~~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~G~~~~~~~-------------------- 165 (421)
T PRK08596 113 GRGAADMKGGLAGALFAIQLLHEAGI--ELPGDLIFQSVIGEEVGE-----AGTLQCCER-------------------- 165 (421)
T ss_pred eccccccchHHHHHHHHHHHHHHcCC--CCCCcEEEEEEeccccCC-----cCHHHHHhc--------------------
Confidence 677999999999999999999987 789999999999999853 588877520
Q ss_pred HHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecC----------CCCCCCC
Q 016853 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ----------GHAGTVP 205 (381)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~----------~Hs~~~p 205 (381)
+ +.+|.+ ++.|++ .. .+.+++|..+++++++|.. +|++. |
T Consensus 166 ---~------------~~~d~~-----i~~ep~--------~~-~~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~-p 215 (421)
T PRK08596 166 ---G------------YDADFA-----VVVDTS--------DL-HMQGQGGVITGWITVKSPQTFHDGTRRQMIHAGG-G 215 (421)
T ss_pred ---C------------CCCCEE-----EECCCC--------CC-ccccccceeeEEEEEEeecccccccccccccccC-C
Confidence 1 111211 233432 11 1357889888888888763 69997 9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChh
Q 016853 206 MSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDA 285 (381)
Q Consensus 206 ~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~ 285 (381)
+.|.||+..+++++.+|+.+...+ ......... + .+..++|++.|+| |...|+||++|++.+|+|++|++
T Consensus 216 -~~G~nai~~~~~~i~~l~~~~~~~-~~~~~~~~~------~-~~~~t~~v~~i~g-G~~~nvvP~~~~~~~d~R~~p~~ 285 (421)
T PRK08596 216 -LFGASAIEKMMKIIQSLQELERHW-AVMKSYPGF------P-PGTNTINPAVIEG-GRHAAFIADECRLWITVHFYPNE 285 (421)
T ss_pred -ccCcCHHHHHHHHHHHHHHHHHHH-hhcccCccC------C-CCCcceeeeeeeC-CCCCCccCceEEEEEEeeeCCCC
Confidence 799999999999999998874211 000000000 1 1357899999999 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH------cCceEEEE-----E--eccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccc
Q 016853 286 GRETVLYELSNQLYQICEK------RSVSCIVE-----R--KHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIP 350 (381)
Q Consensus 286 ~~~~~~~~i~~~~~~~~~~------~~~~v~~~-----~--~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~ 350 (381)
++++++++|++++...+.. ...++++. . ...+|++ ..++++++.+.+++++++|.+ +.
T Consensus 286 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~-------~~ 358 (421)
T PRK08596 286 TYEQVIKEIEEYIGKVAAADPWLRENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKN-------AI 358 (421)
T ss_pred CHHHHHHHHHHHHHHHHhcChhhhhCCceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCC-------Ce
Confidence 9999999999999875431 11222211 0 1124554 467889999999999998764 22
Q ss_pred cccCcccHHHHHHhhh-cCeEEEEEee
Q 016853 351 VIMSGAGHDAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 351 ~~~~~g~tD~~~~~~~-~p~~~~~~~~ 376 (381)
....+++||++++... +|++. |.|.
T Consensus 359 ~~~~~g~tD~~~~~~~gip~v~-~Gpg 384 (421)
T PRK08596 359 LDMSTTVTDGGWFAEFGIPAVI-YGPG 384 (421)
T ss_pred eeEEeeecchhhhhhcCCCEEE-ECCC
Confidence 2235688999999877 99874 4454
No 38
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=1.1e-35 Score=291.67 Aligned_cols=307 Identities=16% Similarity=0.113 Sum_probs=218.7
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEc----CCCCEEEEecCCCCCCCeEEEeecccCCcCC----------------------
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVD----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~----~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------------- 57 (381)
+|.++++||.++|+++|++++.. ...|++++++|+++..|+|+|+|||||||.+
T Consensus 29 ~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGr 108 (400)
T TIGR01880 29 DYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYAR 108 (400)
T ss_pred cHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEc
Confidence 47899999999999999987543 2347999998754335899999999999852
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHH
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~ 137 (381)
|+.|||++++++|+|+++|++.+. .++++|.++|++|||.++ ..|++.+... ..+.
T Consensus 109 G~~D~K~~~aa~l~a~~~l~~~~~--~~~~~v~l~~~~dEE~g~----~~G~~~~~~~---~~~~--------------- 164 (400)
T TIGR01880 109 GAQDMKCVGVQYLEAVRNLKASGF--KFKRTIHISFVPDEEIGG----HDGMEKFAKT---DEFK--------------- 164 (400)
T ss_pred ccccccHHHHHHHHHHHHHHHcCC--CCCceEEEEEeCCcccCc----HhHHHHHHHh---hhcc---------------
Confidence 666999999999999999999886 788999999999999852 2477776521 0000
Q ss_pred CCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 016853 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (381)
Q Consensus 138 ~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~ 217 (381)
..+..+ .++.+.+ .+.....+..+++|+.+++|+++|+++|+|. | . ..||+..++
T Consensus 165 ---------------~~~~~~-----~~d~g~~--~~~~~~~i~~~~kG~~~~~l~v~G~~~Hs~~-~-~-~~nai~~l~ 219 (400)
T TIGR01880 165 ---------------ALNLGF-----ALDEGLA--SPDDVYRVFYAERVPWWVVVTAPGNPGHGSK-L-M-ENTAMEKLE 219 (400)
T ss_pred ---------------CCceEE-----EEcCCCc--ccccccceeEEeeEEEEEEEEEecCCCCCCC-C-C-CCCHHHHHH
Confidence 001111 1121211 0111123667899999999999999999997 6 2 379999999
Q ss_pred HHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHH
Q 016853 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQ 297 (381)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~ 297 (381)
+++..|+++.......+...... +....+|++++.|+| |...|+||++|++.+|+|++|.++.+++.++|+++
T Consensus 220 ~~i~~l~~~~~~~~~~~~~~~~~------~~~~~~t~~v~~i~g-G~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~ 292 (400)
T TIGR01880 220 KSVESIRRFRESQFQLLQSNPDL------AIGDVTSVNLTKLKG-GVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEW 292 (400)
T ss_pred HHHHHHHHhhHHHHHHHhcCccc------cccccceeecceecc-CCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHH
Confidence 99998877532110000000000 111247999999999 89999999999999999999999999999999998
Q ss_pred HHHHHHHcCceEEEEEeccCC-Cc--cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEE
Q 016853 298 LYQICEKRSVSCIVERKHDAN-AV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLL 373 (381)
Q Consensus 298 ~~~~~~~~~~~v~~~~~~~~~-~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~ 373 (381)
++.. ..+++++++.....+ +. ..++++++.+.+++++. +.. +....++|+||+++++.. +|++ .|
T Consensus 293 i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-~~~-------~~~~~~~g~tDa~~~~~~gip~v-~f 361 (400)
T TIGR01880 293 CADA--GEGVTYEFSQHSGKPLVTPHDDSNPWWVAFKDAVKEM-GCT-------FKPEILPGSTDSRYIRAAGVPAL-GF 361 (400)
T ss_pred Hhcc--CCceEEEEeecCCCCCCCCCCCCCHHHHHHHHHHHHc-CCe-------ecceeecCcchHHHHHhCCCCeE-EE
Confidence 8763 234555544332222 22 35678999999999985 321 112245688999999987 9995 67
Q ss_pred EeeC
Q 016853 374 CRLN 377 (381)
Q Consensus 374 ~~~~ 377 (381)
+|..
T Consensus 362 gp~~ 365 (400)
T TIGR01880 362 SPMN 365 (400)
T ss_pred CCcc
Confidence 7653
No 39
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=2e-35 Score=289.27 Aligned_cols=295 Identities=20% Similarity=0.163 Sum_probs=217.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC----------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------------- 57 (381)
+|++|.++++||.++|+++||+ ++++..+|+++++ |. +.|+|+|+|||||||.+
T Consensus 28 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~-g~--~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGr 104 (395)
T TIGR03320 28 ESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYI-GH--GPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGR 104 (395)
T ss_pred CCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEe-CC--CCcEEEEEecccccCCCCccccccCCCceEEECCEEEec
Confidence 3678999999999999999997 4666678999998 43 34899999999999852
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHH
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~ 137 (381)
|+.|||++++++|.|+++|++.+. .++++|.+++++|||.++ -.+++.++. +
T Consensus 105 G~~D~Kg~~aa~l~A~~~l~~~g~--~~~~~i~~~~~~dEE~~~----g~~~~~~~~----------------------~ 156 (395)
T TIGR03320 105 GASDQEGGIASMVYAGKIIKDLGL--LDDYTLLVTGTVQEEDCD----GLCWQYIIE----------------------E 156 (395)
T ss_pred CccCccchHHHHHHHHHHHHHcCC--CCCceEEEEecccccccC----chHHHHHHH----------------------h
Confidence 778999999999999999999886 677899999999999742 112333321 1
Q ss_pred CCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 016853 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (381)
Q Consensus 138 ~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~ 217 (381)
.+ +.+|.+ +..|+ ....+..+++|..+++|+++|+++|+|. | +.|.||+..++
T Consensus 157 ~~------------~~~d~~-----iv~ep--------~~~~i~~g~~G~~~~~v~~~G~~~Hss~-p-~~g~nAi~~~~ 209 (395)
T TIGR03320 157 DG------------IKPEFV-----VITEP--------TDMNIYRGQRGRMEIKVTVKGVSCHGSA-P-ERGDNAIYKMA 209 (395)
T ss_pred cC------------CCCCEE-----EEcCC--------CccceEEecceEEEEEEEEeeeccccCC-C-CCCCCHHHHHH
Confidence 11 122322 12222 2234677899999999999999999997 9 69999999999
Q ss_pred HHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHH
Q 016853 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQ 297 (381)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~ 297 (381)
+++.+|+++..... .++..+..+++++.|++++...|+||++|++.+|+|++|+++.+++.++|+++
T Consensus 210 ~~l~~l~~~~~~~~-------------~~~~~~~~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~ 276 (395)
T TIGR03320 210 PILKELSQLNANLV-------------EDPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNL 276 (395)
T ss_pred HHHHHHHHHHHhhc-------------CCcccCcCceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 99999998754210 02333456899999998445899999999999999999999999999999987
Q ss_pred HHHHHHHcCceEEEEEe-------------ccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHH-
Q 016853 298 LYQICEKRSVSCIVERK-------------HDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAM- 361 (381)
Q Consensus 298 ~~~~~~~~~~~v~~~~~-------------~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~- 361 (381)
+... ..++++++... ..+|++ +.++++++.+.+++++++|.++ ......+++|+.
T Consensus 277 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~-------~~~~~~~~~~~~~ 347 (395)
T TIGR03320 277 PAVQ--GAEAKVEMYNYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALETYKRLFGKEP-------GVDKWTFSTNGVS 347 (395)
T ss_pred Hhhc--CCCceEeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHhCCCC-------ceeecceecccce
Confidence 6432 11233332211 123443 4678899999999999987642 111334667874
Q ss_pred HHhhh-cCeEEEEEee
Q 016853 362 AMSHL-TKVCSLLCRL 376 (381)
Q Consensus 362 ~~~~~-~p~~~~~~~~ 376 (381)
++++. +|++ .|.|.
T Consensus 348 ~~~~~g~p~v-~~Gpg 362 (395)
T TIGR03320 348 IMGRHGIPVI-GFGPG 362 (395)
T ss_pred ehhhcCCCEE-EECCC
Confidence 45555 8988 56664
No 40
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=293.03 Aligned_cols=304 Identities=17% Similarity=0.175 Sum_probs=214.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEcCC---CCEEEEecCCCCCCCeEEEeecccCCcCC----------------------CCC
Q 016853 6 VRAGNLIRQWMEDAGLRTWVDHL---GNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GIF 60 (381)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~~~---gnv~a~~~g~~~~~~~i~l~~H~DtVp~~----------------------g~~ 60 (381)
.++++||.++|+++||++++.+. .|+++++++ + .+|+|+|+|||||||.+ |+.
T Consensus 25 ~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~-~-~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~ 102 (436)
T PRK06446 25 EETANYLKDTMEKLGIKANIERTKGHPVVYGEINV-G-AKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGAS 102 (436)
T ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecC-C-CCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEecc
Confidence 79999999999999999876543 469999853 2 35899999999999852 778
Q ss_pred cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCC
Q 016853 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (381)
Q Consensus 61 D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~ 140 (381)
|||+|++++|+|+++|++.+ .++++|.++|++|||.++ .|++.++... ..
T Consensus 103 DmKgglaa~l~A~~~l~~~~---~~~~~i~~~~~~dEE~g~-----~g~~~~l~~~--------------------~~-- 152 (436)
T PRK06446 103 DNKGTLMARLFAIKHLIDKH---KLNVNVKFLYEGEEEIGS-----PNLEDFIEKN--------------------KN-- 152 (436)
T ss_pred CCcHHHHHHHHHHHHHHHcC---CCCCCEEEEEEcccccCC-----HhHHHHHHHH--------------------HH--
Confidence 99999999999999998765 578999999999999853 4666553100 00
Q ss_pred ChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEe--cCCCCCCCCCCCCCCHHHHHHH
Q 016853 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG--SQGHAGTVPMSMRQDPMTAAAE 218 (381)
Q Consensus 141 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G--~~~Hs~~~p~~~g~NAi~~~~~ 218 (381)
.++.|.+ + +|+.... ..+ ...++.++||..+++++++| +++|||. | ..|.||+..+++
T Consensus 153 ----------~~~~d~v-----i-~E~~~~~-~~~-~~~i~~~~kG~~~~~l~v~G~~~~~Hss~-p-~~g~NAi~~~~~ 212 (436)
T PRK06446 153 ----------KLKADSV-----I-MEGAGLD-PKG-RPQIVLGVKGLLYVELVLRTGTKDLHSSN-A-PIVRNPAWDLVK 212 (436)
T ss_pred ----------HhCCCEE-----E-ECCCCcc-CCC-CeEEEEecCeEEEEEEEEEeCCCCCCCCC-C-ccCCCHHHHHHH
Confidence 0112221 1 2332111 111 12477899999999999999 9999997 8 689999999999
Q ss_pred HHHHHHHHhcC-----CCC---cc-----------ccCC----------CCCCcc----cccCCCCeEEEEEEEEecC--
Q 016853 219 LIVLLERLCKH-----PKD---FL-----------SYDG----------RSNCST----LESLSSSLVCTVGEISSWP-- 263 (381)
Q Consensus 219 ~i~~l~~~~~~-----~~~---~~-----------~~~~----------~~~~~~----~~p~~~~~ti~~~~i~g~g-- 263 (381)
++.+|.+.... ..+ .+ +++. ...... .++....+++|++.|+++.
T Consensus 213 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~ 292 (436)
T PRK06446 213 LLSTLVDGEGRVLIPGFYDDVRELTEEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTG 292 (436)
T ss_pred HHHhhCCCCCCEEccchhcCCCCCCHHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccC
Confidence 99999754210 000 00 0000 000000 0011235799999999831
Q ss_pred -CCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhh
Q 016853 264 -SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAALKR 340 (381)
Q Consensus 264 -~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~ 340 (381)
...|+||++|++++|+|++|+++.+++.++|++++++. +..++++.....+++ ..++++++.+.+++++++|.
T Consensus 293 ~~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~l~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~v~~l~~a~~~~~g~ 368 (436)
T PRK06446 293 KGSKTIVPSRAFAKLDFRLVPNQDPYKIFELLKKHLQKV----GFNGEIIVHGFEYPVRTSVNSKVVKAMIESAKRVYGT 368 (436)
T ss_pred CCCCcEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHHc----CCCeEEEEcCCcceeecCCCCHHHHHHHHHHHHHhCC
Confidence 46799999999999999999999999999999988653 334555544444553 36788999999999999876
Q ss_pred ccCCCCcccccccCcccHHHHHHhh-h-cCeEE
Q 016853 341 MTGATQHEIPVIMSGAGHDAMAMSH-L-TKVCS 371 (381)
Q Consensus 341 ~~~~~~~~~~~~~~~g~tD~~~~~~-~-~p~~~ 371 (381)
.| .....++|++|+++|.+ . +|+++
T Consensus 369 ~~------~~~~~~~g~~d~~~~~~~~gip~v~ 395 (436)
T PRK06446 369 EP------VVIPNSAGTQPMGLFVYKLGIRDIV 395 (436)
T ss_pred CC------ceecCCCCcchHHHHHHHhCCCcce
Confidence 42 11113346678888865 3 89875
No 41
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=1.2e-35 Score=291.77 Aligned_cols=286 Identities=14% Similarity=0.113 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcC-CCCEEEEecCCCC-CCCeEEEeecccCCcC-------------CC--------
Q 016853 3 PASVRAGNLIRQWMEDAGLR-TWVDH-LGNVHGRVEGLNA-SAQALLIGSHLDTVVD-------------AG-------- 58 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-~~~~~-~gnv~a~~~g~~~-~~~~i~l~~H~DtVp~-------------~g-------- 58 (381)
++| ++++||.++|+++|++ +++|+ .|||+++++|+.. +.|+|+|.+||||||. +|
T Consensus 31 ~~~-~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmDTv~~~~~~v~p~~~~~~~g~~~~~~~~ 109 (410)
T TIGR01882 31 GQL-TFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVDTADFNGENVNPQIIENYDGESIIQLGD 109 (410)
T ss_pred hHH-HHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecccCcCCCCCCCCEEEecCCCceeeecCC
Confidence 455 8999999999999997 99998 8999999988642 1399999999999984 11
Q ss_pred ------------------------------CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcc
Q 016853 59 ------------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLG 108 (381)
Q Consensus 59 ------------------------------~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~G 108 (381)
+.|||+|+|++|.|+++|++.+- .++++|.|+|+++||++ .|
T Consensus 110 ~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~--~~~g~I~~~ft~dEE~g------~G 181 (410)
T TIGR01882 110 LEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE--IKHGTIRVAFTPDEEIG------RG 181 (410)
T ss_pred CCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC--CCCCCEEEEEECcccCC------cC
Confidence 14999999999999999998642 46899999999999985 27
Q ss_pred hHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecce
Q 016853 109 SAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQT 188 (381)
Q Consensus 109 s~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~ 188 (381)
++.+.. . .++.+ .+ +++... +.+ .+.....|..
T Consensus 182 a~~l~~---------------------~--------------~~~~~--~~---~~i~ge----p~g---~i~~~~~g~~ 214 (410)
T TIGR01882 182 AHKFDV---------------------K--------------DFNAD--FA---YTVDGG----PLG---ELEYETFSAA 214 (410)
T ss_pred cchhhh---------------------h--------------hcCcc--EE---EEeCCC----CCC---eEEEccccce
Confidence 776520 0 00011 11 233211 111 1333456999
Q ss_pred EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCce
Q 016853 189 RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNV 268 (381)
Q Consensus 189 ~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~Nv 268 (381)
+++|+++|+++|++..+ +.++||+..+.+++..+..... +. .++.+.+.+++ + ..|.
T Consensus 215 ~~~I~v~Gk~aHa~~~~-~~g~nAi~~a~~~~~~l~~~~~------------------~~--~t~~~~g~i~~-g-~i~g 271 (410)
T TIGR01882 215 AAKITIQGNNVHPGTAK-GKMINAAQIAIDLHNLLPEDDR------------------PE--YTEGREGFFHL-L-SIDG 271 (410)
T ss_pred EEEEEEEEEecCcccCh-HHHHHHHHHHHHHHHhcCCcCC------------------Cc--cccceeEEEEE-E-eEEE
Confidence 99999999999999855 6899999998888765543211 11 11122345566 4 4677
Q ss_pred eCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCc-eEEEEEeccCC----CccCCHHHHHHHHHHHHHHHhhccC
Q 016853 269 IPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV-SCIVERKHDAN----AVMCDADLSSQLKSASYAALKRMTG 343 (381)
Q Consensus 269 IP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~-~v~~~~~~~~~----~~~~~~~~~~~l~~a~~~~~g~~~~ 343 (381)
||++|++.+|+|+.+.++.++++++|++++++++..+++ .+++++...++ .+.+++++++.+.+++++. |..
T Consensus 272 iPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-G~~-- 348 (410)
T TIGR01882 272 TVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNEYGQDRIKLDMNDQYYNMAEKIEKVMEIVDIAKQAMENL-GIE-- 348 (410)
T ss_pred ecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEEeeecChhhccCCCHHHHHHHHHHHHHh-CCC--
Confidence 999999999999999999999999999999998877773 45555544343 3458889999999999874 543
Q ss_pred CCCcccccccCcccHHHHHHhhh-cCeEEEEEe
Q 016853 344 ATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCR 375 (381)
Q Consensus 344 ~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~ 375 (381)
+...+.+|+||+++|+.. +|++.++.|
T Consensus 349 -----~~~~~~~ggtDa~~~~~~Gip~~~~G~G 376 (410)
T TIGR01882 349 -----PKISPIRGGTDGSQLSYMGLPTPNIFAG 376 (410)
T ss_pred -----CcccccceechHHHHHhCCCCCCeEcCC
Confidence 222244689999999887 999876554
No 42
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=1.9e-35 Score=284.48 Aligned_cols=280 Identities=20% Similarity=0.224 Sum_probs=210.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC-------------CCCcChHHHH
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------GIFDGSLGII 67 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------g~~D~k~gia 67 (381)
.|++|.++++||.++|+++||+++.+..+|+++++.+ ++|+|+|+||+||||.. |+.|||++++
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~i~~~~~---~~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~a 97 (348)
T PRK04443 21 PSGEEAAAAEFLVEFMESHGREAWVDEAGNARGPAGD---GPPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLA 97 (348)
T ss_pred CCCChHHHHHHHHHHHHHcCCEEEEcCCCcEEEEcCC---CCCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHH
Confidence 3678999999999999999999998888999999833 24899999999999852 7889999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhh
Q 016853 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESL 147 (381)
Q Consensus 68 a~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~ 147 (381)
++|+|+++| +. .++++|.+++++|||+++ .|...++ .+
T Consensus 98 a~l~A~~~l---~~--~~~~~i~~~~~~dEE~g~-----~~~~~~l----------------------~~---------- 135 (348)
T PRK04443 98 AFAAAAARL---EA--LVRARVSFVGAVEEEAPS-----SGGARLV----------------------AD---------- 135 (348)
T ss_pred HHHHHHHHh---cc--cCCCCEEEEEEcccccCC-----hhHHHHH----------------------Hh----------
Confidence 999999999 33 688999999999999853 2333322 01
Q ss_pred hhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 016853 148 LQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLC 227 (381)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~ 227 (381)
.+.+|.+ +..||+ +. ..+..+++|..+++|+++|+++|||. | +.||+..+++++.+|+++.
T Consensus 136 ---~~~~d~~-----iv~Ept------~~-~~i~~~~kG~~~~~l~~~G~~~Hss~-~---g~NAi~~~~~~l~~l~~~~ 196 (348)
T PRK04443 136 ---RERPDAV-----IIGEPS------GW-DGITLGYKGRLLVTYVATSESFHSAG-P---EPNAAEDAIEWWLAVEAWF 196 (348)
T ss_pred ---ccCCCEE-----EEeCCC------Cc-cceeeecccEEEEEEEEEeCCCccCC-C---CCCHHHHHHHHHHHHHHHH
Confidence 1112222 122321 11 13667899999999999999999996 6 4899999999999998764
Q ss_pred cCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCc
Q 016853 228 KHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 307 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~ 307 (381)
... . . .++.+++.++|++.|+. ..|+||++|++.+|+|++|++++++++++|++++. ++
T Consensus 197 ~~~-~-----~------~~~~~~~~~~~i~~i~~---~~n~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~ 255 (348)
T PRK04443 197 EAN-D-----G------RERVFDQVTPKLVDFDS---SSDGLTVEAEMTVGLRLPPGLSPEEAREILDALLP------TG 255 (348)
T ss_pred hcC-c-----c------ccccccccceeeeEEec---CCCCCCceEEEEEEEccCCCCCHHHHHHHHHHhCC------Cc
Confidence 310 0 0 01233466888888884 46999999999999999999999999999998872 23
Q ss_pred eEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhh-h-cCeEEEEEee
Q 016853 308 SCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH-L-TKVCSLLCRL 376 (381)
Q Consensus 308 ~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~-~-~p~~~~~~~~ 376 (381)
++++ ....|++ ..++++++.+.+++++.++. +.....+|+||+++|++ . +|++. |.|.
T Consensus 256 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~g~tD~~~~~~~~gip~v~-~Gpg 317 (348)
T PRK04443 256 TVTF--TGAVPAYMVSKRTPLARAFRVAIREAGGT--------PRLKRKTGTSDMNVVAPAWGCPMVA-YGPG 317 (348)
T ss_pred EEEE--ecCCCceecCCCCHHHHHHHHHHHHhcCC--------cceeccccCCcHHHHhhhcCCCEEE-ECCC
Confidence 4433 3344554 46788999999999997553 12223458899999976 3 89884 5454
No 43
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.5e-35 Score=287.48 Aligned_cols=287 Identities=21% Similarity=0.229 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcCC------CCEEEEecCCCCCCCeEEEeecccCCcCC---------------------
Q 016853 5 SVRAGNLIRQWMEDAGLRTWVDHL------GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (381)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~~------gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------------- 57 (381)
|.++++||.++|+++|+++++++. .|+++++ |.. .++|+|+|||||||.+
T Consensus 31 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~-g~~--~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~Gr 107 (383)
T PRK05111 31 NRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASL-GSG--EGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGL 107 (383)
T ss_pred hHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEe-CCC--CCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEec
Confidence 478999999999999999876532 4899999 543 3689999999999852
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHH
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~ 137 (381)
|+.|||++++++|.|+++|++.+ ++++|.|+|++|||.++ .|++.++..
T Consensus 108 G~~D~Kg~~a~~l~a~~~l~~~~----~~~~i~~~~~~~EE~g~-----~G~~~~~~~---------------------- 156 (383)
T PRK05111 108 GTADMKGFFAFILEALRDIDLTK----LKKPLYILATADEETSM-----AGARAFAEA---------------------- 156 (383)
T ss_pred ccccccHHHHHHHHHHHHHhhcC----CCCCeEEEEEeccccCc-----ccHHHHHhc----------------------
Confidence 77899999999999999998754 57899999999999752 588877521
Q ss_pred CCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 016853 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (381)
Q Consensus 138 ~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~ 217 (381)
. .+++|.+ +..++ ....++.+++|..+++|+++|+++|+|. | +.|.||+..++
T Consensus 157 ~------------~~~~d~~-----i~~ep--------~~~~~~~~~~G~~~~~i~v~G~~~H~~~-p-~~g~nai~~~~ 209 (383)
T PRK05111 157 T------------AIRPDCA-----IIGEP--------TSLKPVRAHKGHMSEAIRITGQSGHSSD-P-ALGVNAIELMH 209 (383)
T ss_pred C------------CCCCCEE-----EEcCC--------CCCceeecccceEEEEEEEEeechhccC-C-ccCcCHHHHHH
Confidence 0 0112211 11122 1122456799999999999999999997 9 79999999999
Q ss_pred HHHHHHHHHhcCCCCccccCCCCCCcccccC--CCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHH
Q 016853 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESL--SSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELS 295 (381)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~ 295 (381)
+++.+++.+......... +|. ...+++|++.|+| |...|+||++|++.+|+|+.|.++.+++.++|+
T Consensus 210 ~~i~~l~~~~~~~~~~~~----------~~~~~~~~~t~~i~~i~g-g~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~ 278 (383)
T PRK05111 210 DVIGELLQLRDELQERYH----------NPAFTVPYPTLNLGHIHG-GDAPNRICGCCELHFDIRPLPGMTLEDLRGLLR 278 (383)
T ss_pred HHHHHHHHHHHHHhccCC----------CccCCCCCCceeEeeeec-CCcCcccCCceEEEEEEecCCCCCHHHHHHHHH
Confidence 999999876431100000 111 1357899999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHcCceEEEEEe-ccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEE
Q 016853 296 NQLYQICEKRSVSCIVERK-HDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCS 371 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~ 371 (381)
+++++++..++++++++.. ...|++ ..++++++.+.+ ++|.. +.. .++++|+.++.+. +|+++
T Consensus 279 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~g~~-------~~~--~~~~~Da~~~~~~g~p~v~ 345 (383)
T PRK05111 279 EALAPVSERWPGRITVAPLHPPIPGYECPADHQLVRVVEK----LLGHK-------AEV--VNYCTEAPFIQQLGCPTLV 345 (383)
T ss_pred HHHHHHHhhCCCeEEEeccccCCCCcCCCCCCHHHHHHHH----HhCCC-------Cce--eeeeccHHHHHhcCCCEEE
Confidence 9999888878877777543 244544 355667766544 33432 222 2367999999877 89987
Q ss_pred EEEee
Q 016853 372 LLCRL 376 (381)
Q Consensus 372 ~~~~~ 376 (381)
++.+.
T Consensus 346 ~G~g~ 350 (383)
T PRK05111 346 LGPGS 350 (383)
T ss_pred ECCCc
Confidence 66553
No 44
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=3.8e-35 Score=287.17 Aligned_cols=295 Identities=20% Similarity=0.158 Sum_probs=218.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC----------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------------- 57 (381)
+|++|.++++||.++|+++||+ ++.+..+|+++.+ |. +.|+|+|++||||||.+
T Consensus 28 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~-g~--~~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGr 104 (395)
T TIGR03526 28 ESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYI-GH--GPKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGR 104 (395)
T ss_pred CCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEe-CC--CCCEEEEEeeccccCCCCcccccCCCCceEEECCEEEec
Confidence 3678999999999999999998 4566678999988 43 34899999999999952
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHH
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~ 137 (381)
|..|||++++++|.|+++|++.++ .+++++.++++++||.++ -.|++.++. +
T Consensus 105 G~~D~Kg~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~~~----g~~~~~~~~----------------------~ 156 (395)
T TIGR03526 105 GASDQEGGIASMVYAGKIIKDLGL--LDDYTLLVTGTVQEEDCD----GLCWQYIIE----------------------E 156 (395)
T ss_pred CccccchhHHHHHHHHHHHHHcCC--CCCceEEEEEecccccCC----cHhHHHHHh----------------------c
Confidence 778999999999999999999886 677899999999999531 124444431 1
Q ss_pred CCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 016853 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (381)
Q Consensus 138 ~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~ 217 (381)
.+ +++|.++ ..|+ ....+..+++|..+++|+++|+++|+|. | +.|.||+..++
T Consensus 157 ~~------------~~~d~~i-----~~ep--------~~~~i~~g~~G~~~~~v~v~G~~~Hs~~-p-~~g~nAi~~~~ 209 (395)
T TIGR03526 157 DK------------IKPEFVV-----ITEP--------TDMNIYRGQRGRMEIKVTVKGVSCHGSA-P-ERGDNAIYKMA 209 (395)
T ss_pred cC------------CCCCEEE-----ecCC--------CCceEEEEcceEEEEEEEEecCCCccCC-C-CCCCCHHHHHH
Confidence 11 1123221 1222 2234677899999999999999999997 9 79999999999
Q ss_pred HHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHH
Q 016853 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQ 297 (381)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~ 297 (381)
+++.+|+.+..... .++..+..+++++.|++++...|+||++|++++|+|++|+++.+++++.|+++
T Consensus 210 ~~i~~l~~~~~~~~-------------~~~~~~~~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~ 276 (395)
T TIGR03526 210 PILKELSQLNANLV-------------EDPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNL 276 (395)
T ss_pred HHHHHHHHhhhhhc-------------CCcccCccceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 99999988754210 02333457999999998445899999999999999999999999999999988
Q ss_pred HHHHHHHcCceEEEEEe-------------ccCCC--ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHH
Q 016853 298 LYQICEKRSVSCIVERK-------------HDANA--VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMA 362 (381)
Q Consensus 298 ~~~~~~~~~~~v~~~~~-------------~~~~~--~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~ 362 (381)
++.. ..+.++++... ..+|+ ++.++++++++.+++++++|..+ ......+++|+++
T Consensus 277 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~g~~~-------~~~~~~~~~~~~~ 347 (395)
T TIGR03526 277 PAVQ--GAEAEVEMYEYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALETYKRLFGKEP-------GVDKWTFSTNGVS 347 (395)
T ss_pred HHhc--CCcceEEEeccccccccccccccccccCccccCCCCHHHHHHHHHHHHHhCCCC-------ceeeeeeecccce
Confidence 7542 11233332211 02344 34678899999999999987642 1112346678754
Q ss_pred -Hhhh-cCeEEEEEee
Q 016853 363 -MSHL-TKVCSLLCRL 376 (381)
Q Consensus 363 -~~~~-~p~~~~~~~~ 376 (381)
+++. +|++ .|.|.
T Consensus 348 ~~~~~g~p~v-~~Gpg 362 (395)
T TIGR03526 348 IMGRHGIPVI-GFGPG 362 (395)
T ss_pred ehhhcCCCEE-EECCc
Confidence 4555 8988 56554
No 45
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-35 Score=290.28 Aligned_cols=315 Identities=17% Similarity=0.125 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcCC---CCEEEEecCCCCCCCeEEEeecccCCcCC---------------------
Q 016853 3 PASVRAGNLIRQWMEDAGLR-TWVDHL---GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-~~~~~~---gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------------- 57 (381)
.+|.++++||.++|+++||+ ++++.. .|+++++.|.. ++|+|+|+||+||||.+
T Consensus 37 ~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~-~~~~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyG 115 (456)
T PRK08201 37 EDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAP-GKPTVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYA 115 (456)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCC-CCCEEEEEeccCCcCCCchhcccCCCCceEeECCEEEE
Confidence 36789999999999999996 554433 46999886643 46899999999999853
Q ss_pred -CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHH
Q 016853 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALR 136 (381)
Q Consensus 58 -g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~ 136 (381)
|+.|||++++++|+|+++|++.+. .++++|.|++++|||.++ .|+..++... .
T Consensus 116 RG~~DmKgglaa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~~~------------------~- 169 (456)
T PRK08201 116 RGASDDKGQVFMHLKAVEALLKVEG--TLPVNVKFCIEGEEEIGS-----PNLDSFVEEE------------------K- 169 (456)
T ss_pred EecccCcHHHHHHHHHHHHHHHhcC--CCCCCEEEEEEcccccCC-----ccHHHHHHhh------------------H-
Confidence 677999999999999999987764 678899999999999853 4565543100 0
Q ss_pred HCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCC--CCCCCCCCCCCCHHH
Q 016853 137 ENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQG--HAGTVPMSMRQDPMT 214 (381)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~--Hs~~~p~~~g~NAi~ 214 (381)
+ .+++|.+ +..|++.. ......+..++||..+++|+|+|+++ |||..| ..+.|||.
T Consensus 170 ~-------------~~~~d~~-----ii~e~~~~---~~~~~~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~-~~~~nAi~ 227 (456)
T PRK08201 170 D-------------KLAADVV-----LISDTTLL---GPGKPAICYGLRGLAALEIDVRGAKGDLHSGLYG-GAVPNALH 227 (456)
T ss_pred H-------------hccCCEE-----EEeCCCcC---CCCCEEEEEecCCeEEEEEEEEeCCCCCcccccc-CcCCCHHH
Confidence 0 0112222 12232211 01112377899999999999999998 998744 45689999
Q ss_pred HHHHHHHHHHHHhcCC-----CCcc--------------ccCCC-C-CCcccccC------------CCCeEEEEEEEEe
Q 016853 215 AAAELIVLLERLCKHP-----KDFL--------------SYDGR-S-NCSTLESL------------SSSLVCTVGEISS 261 (381)
Q Consensus 215 ~~~~~i~~l~~~~~~~-----~~~~--------------~~~~~-~-~~~~~~p~------------~~~~ti~~~~i~g 261 (381)
.|+++|.+|+++..+. ++.+ .+... . .....++. ...+|+|++.|+|
T Consensus 228 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~g 307 (456)
T PRK08201 228 ALVQLLASLHDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYG 307 (456)
T ss_pred HHHHHHHhcCCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeec
Confidence 9999999997642110 0000 00000 0 00000000 1145899999988
Q ss_pred cC----CCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHHHH
Q 016853 262 WP----SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASY 335 (381)
Q Consensus 262 ~g----~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a~~ 335 (381)
| ...|+||++|++.+|+|++|+++.++++++|+++++... ..++++++.....++++ ..++++++.+.++++
T Consensus 308 -g~~~~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 385 (456)
T PRK08201 308 -GFQGEGTKTVIPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRRFDKGPAFVAPIDHPAIQAAARAYE 385 (456)
T ss_pred -CCCCCCCceEECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEECCCcCceecCCCCHHHHHHHHHHH
Confidence 4 348999999999999999999999999999999987632 23455655544445554 467889999999999
Q ss_pred HHHhhccCCCCcccccccCcccH--HHHHHhhh-cCeEEEEEee
Q 016853 336 AALKRMTGATQHEIPVIMSGAGH--DAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 336 ~~~g~~~~~~~~~~~~~~~~g~t--D~~~~~~~-~p~~~~~~~~ 376 (381)
+++|.++ .....++++ |+.++... +|+++ |.|+
T Consensus 386 ~~~g~~~-------~~~~~gg~~~~~~~~~~~~gip~v~-~GpG 421 (456)
T PRK08201 386 AVYGTEA-------AFTRMGGSIPVVETFSSQLHIPIVL-MGFG 421 (456)
T ss_pred HHhCCCc-------eecCCCCcHHHHHHHHHHhCCCEEE-ecCC
Confidence 9987642 222232322 67666555 89985 5554
No 46
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=293.40 Aligned_cols=313 Identities=19% Similarity=0.163 Sum_probs=217.6
Q ss_pred HHHHHHHHHHHHcCCEEEEcCC--CCEEEEecCCCCCCCeEEEeecccCCcCC------------------------CCC
Q 016853 7 RAGNLIRQWMEDAGLRTWVDHL--GNVHGRVEGLNASAQALLIGSHLDTVVDA------------------------GIF 60 (381)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~~--gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------------g~~ 60 (381)
++++||.++|+.+|++++.... .|+++.++|.+++.|+|+|+|||||||.+ |+.
T Consensus 74 ~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~ 153 (486)
T PRK08262 74 ALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGAL 153 (486)
T ss_pred HHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEecCcc
Confidence 5899999999999998764433 37888887765444899999999999863 667
Q ss_pred cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCC
Q 016853 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (381)
Q Consensus 61 D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~ 140 (381)
|||++++++|.|+++|++.+. .++++|.++|++|||+++ .|++.+...+. +.+.
T Consensus 154 D~Kg~~aa~L~A~~~l~~~~~--~l~~~I~llf~~dEE~g~-----~G~~~l~~~l~-------------------~~~~ 207 (486)
T PRK08262 154 DDKGSLVAILEAAEALLAQGF--QPRRTIYLAFGHDEEVGG-----LGARAIAELLK-------------------ERGV 207 (486)
T ss_pred ccchhHHHHHHHHHHHHHcCC--CCCCeEEEEEecccccCC-----cCHHHHHHHHH-------------------HhcC
Confidence 999999999999999999886 789999999999999853 48887763221 1111
Q ss_pred ChhhhhhhhccCCCccch---heeeecccCCcccccCCCc-ceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHH
Q 016853 141 DIAEESLLQLKYDPASVW---GYIEVHIEQGPVLEWVGFP-LGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAA 216 (381)
Q Consensus 141 ~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~~~~~-~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~ 216 (381)
+ ++.+. ..+..+..+ ..+.+ ..+..+++|..+++|+++|+++|||. | .. .||+..+
T Consensus 208 ~------------~~~~~~~~~~i~~~~~~-----~~~~p~~~i~~~~kG~~~~~i~v~G~~~Hss~-p-~~-~nai~~l 267 (486)
T PRK08262 208 R------------LAFVLDEGGAITEGVLP-----GVKKPVALIGVAEKGYATLELTARATGGHSSM-P-PR-QTAIGRL 267 (486)
T ss_pred C------------EEEEEeCCceecccccC-----CCCceEEeeEEeeeeeEEEEEEEecCCCCCCC-C-CC-CCHHHHH
Confidence 0 11000 000001000 00111 12445789999999999999999998 8 57 9999999
Q ss_pred HHHHHHHHHHhcCC-C--------Ccc----ccCC-----CC---CC-----cc---cccCCCCeEEEEEEEEecCCCCc
Q 016853 217 AELIVLLERLCKHP-K--------DFL----SYDG-----RS---NC-----ST---LESLSSSLVCTVGEISSWPSASN 267 (381)
Q Consensus 217 ~~~i~~l~~~~~~~-~--------~~~----~~~~-----~~---~~-----~~---~~p~~~~~ti~~~~i~g~g~~~N 267 (381)
+++|++|++..... . +.+ .... .. .. .. .+.....+|+|++.|+| |...|
T Consensus 268 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~g-G~~~N 346 (486)
T PRK08262 268 ARALTRLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKG-SPKDN 346 (486)
T ss_pred HHHHHHHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEec-CCccc
Confidence 99999998742100 0 000 0000 00 00 00 00012367999999999 88999
Q ss_pred eeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCC--CccCCHHHHHHHHHHHHHHHhhccCCC
Q 016853 268 VIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDAN--AVMCDADLSSQLKSASYAALKRMTGAT 345 (381)
Q Consensus 268 vIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~l~~a~~~~~g~~~~~~ 345 (381)
+||++|++++|+|++|+++.+++.++|++++++. ++++++......+ +..+++++++.+.++++++++..
T Consensus 347 vIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~---- 418 (486)
T PRK08262 347 VLPQRATATVNFRILPGDSVESVLAHVRRAVADD----RVEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDV---- 418 (486)
T ss_pred cCCCccEEEEEEEeCCCCCHHHHHHHHHHHhccC----ceEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC----
Confidence 9999999999999999999999999999888653 4555444322223 34577899999999999987642
Q ss_pred CcccccccCcccHHHHHHhhhcCeEEEEEee
Q 016853 346 QHEIPVIMSGAGHDAMAMSHLTKVCSLLCRL 376 (381)
Q Consensus 346 ~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~ 376 (381)
......++++||+++|+...|.++.|.+.
T Consensus 419 --~~~~~~~~g~tDa~~~~~~~p~~~~~~~~ 447 (486)
T PRK08262 419 --VVAPYLVVGATDSRHYSGISDNVYRFSPL 447 (486)
T ss_pred --ccccceecccccHHHHHHhcCCeEEECCc
Confidence 12222356889999998877776655444
No 47
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=284.88 Aligned_cols=308 Identities=30% Similarity=0.345 Sum_probs=223.6
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcCCC------CEEEEecCCCCCCCeEEEeecccCCcCC-------------------
Q 016853 3 PASVRAGNLIRQWMEDAGLRTWVDHLG------NVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~~g------nv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------- 57 (381)
..+.++++|+.++|+++|+.++++..+ |+++++.+..+ .|+|+|+||+||||.+
T Consensus 31 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~-~~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~l 109 (409)
T COG0624 31 GEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDG-GPTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKL 109 (409)
T ss_pred ccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCC-CCeEEEeccccccCCCCcccCccCCCccEEECCEE
Confidence 568999999999999999998877655 89999976542 3999999999999985
Q ss_pred ---CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHH
Q 016853 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (381)
Q Consensus 58 ---g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~ 134 (381)
|..|||++++++++|++.|.+.|. .++++|.+++++|||+++ .|++.+......
T Consensus 110 yGRG~~D~KG~~~a~l~A~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~~~~~~~~~~~~---------------- 166 (409)
T COG0624 110 YGRGAADMKGGLAAALYALSALKAAGG--ELPGDVRLLFTADEESGG-----AGGKAYLEEGEE---------------- 166 (409)
T ss_pred EecCccccchHHHHHHHHHHHHHHhCC--CCCeEEEEEEEeccccCC-----cchHHHHHhcch----------------
Confidence 667999999999999999999776 789999999999999963 455544311000
Q ss_pred HHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHH
Q 016853 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (381)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~ 214 (381)
.. .+.+ +.+++.|+ .++..... .++.+++|..+++|+++|+++|+|..+.+.+.|++.
T Consensus 167 --~~------------~~~~-----d~~i~~E~--~~~~~~~~-~~~~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~ 224 (409)
T COG0624 167 --AL------------GIRP-----DYEIVGEP--TLESEGGD-IIVVGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIH 224 (409)
T ss_pred --hh------------ccCC-----CEEEeCCC--CCcccCCC-eEEEcceeEEEEEEEEEeecccccccCCcccccHHH
Confidence 00 0112 23356666 22222223 345589999999999999999999852379999555
Q ss_pred HHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCC-CeEEEEEEEEec-------CCCCceeCCeEEEEEEeeCCChhH
Q 016853 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSS-SLVCTVGEISSW-------PSASNVIPGEVTFTVDLRAIDDAG 286 (381)
Q Consensus 215 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~ti~~~~i~g~-------g~~~NvIP~~a~~~~diR~~p~~~ 286 (381)
.+.+.+.++.....+.. .+... +.+++++.+.++ |...|+||++|++.+|+|+.|..+
T Consensus 225 ~a~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~ 290 (409)
T COG0624 225 AAIEALAELIEELGDLA--------------GEGFDGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGED 290 (409)
T ss_pred HHHHHHHHHHHHhcccc--------------cccccCCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCC
Confidence 55555544443322110 01111 345555555541 344699999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCceEEEEE--eccCCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHh
Q 016853 287 RETVLYELSNQLYQICEKRSVSCIVER--KHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMS 364 (381)
Q Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~ 364 (381)
++++.+++++.++..+...+++++++. .....+.+.++++++.+.+++++.+|.. +..+.+|+++|+.+++
T Consensus 291 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~-------~~~~~~G~~~da~~~~ 363 (409)
T COG0624 291 LDDVLEELEAELRAIAPKEGVEYEIEPGLGEPPLPVPGDSPLVAALAEAAEELLGLP-------PEVSTGGGTHDARFFA 363 (409)
T ss_pred HHHHHHHHHHHHHHhccccCceEEeccccCCccccCCCchHHHHHHHHHHHHhhCCC-------ceecCCCCcchHHHHH
Confidence 999999999999887654566666654 2233345678899999999999987652 3444566779999999
Q ss_pred hh-cCeEEEEEeeCC
Q 016853 365 HL-TKVCSLLCRLNN 378 (381)
Q Consensus 365 ~~-~p~~~~~~~~~~ 378 (381)
.. +| ++.|+|+..
T Consensus 364 ~~~~~-~~~fgp~~~ 377 (409)
T COG0624 364 RLGIP-AVIFGPGDI 377 (409)
T ss_pred hcCCe-eEEECCCCc
Confidence 98 68 888888764
No 48
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3e-34 Score=276.71 Aligned_cols=281 Identities=19% Similarity=0.147 Sum_probs=206.5
Q ss_pred CCHHHHHHHHHHHHHHHHc-CCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC---------------CCCcChH
Q 016853 1 MSPASVRAGNLIRQWMEDA-GLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------GIFDGSL 64 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~-G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------g~~D~k~ 64 (381)
+|++|.++++||.++|+++ |+++.... .|+++++.+ ++ +++|+|+|||||||.+ |+.|||+
T Consensus 22 ~s~~e~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~-~~-~~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg 98 (352)
T PRK13007 22 VSGDEKALADAVEAALRALPHLEVIRHG-NSVVARTDL-GR-PSRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKS 98 (352)
T ss_pred CCchHHHHHHHHHHHHHhCcCceEEecC-CeEEEEccC-CC-CCeEEEEccccccCCCCCCCcceeCCEEEccCcccccH
Confidence 4789999999999999996 99876543 579999843 22 3689999999999963 6779999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhh
Q 016853 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (381)
Q Consensus 65 giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~ 144 (381)
++|++|+|+++|. .++++|.++|++|||.++ +..|++.+......
T Consensus 99 ~~a~~l~a~~~l~------~~~~~i~~~~~~~EE~~~---~~~G~~~~~~~~~~-------------------------- 143 (352)
T PRK13007 99 GLAVMLHLAATLA------EPAHDLTLVFYDCEEVEA---EANGLGRLAREHPE-------------------------- 143 (352)
T ss_pred HHHHHHHHHHHhh------ccCCCeEEEEEecccccC---CcccHHHHHHhccc--------------------------
Confidence 9999999999993 467899999999999853 12367766421000
Q ss_pred hhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 016853 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (381)
Q Consensus 145 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~ 224 (381)
.+++|.+ +..|+ ....+..+.+|..+++|+++|+++|||. | +.|.||+..+++++.+++
T Consensus 144 ------~~~~d~~-----i~~ep--------~~~~i~~~~~G~~~~~i~v~G~~~Hs~~-p-~~g~nAi~~~~~~i~~l~ 202 (352)
T PRK13007 144 ------WLAGDFA-----ILLEP--------TDGVIEAGCQGTLRVTVTFHGRRAHSAR-S-WLGENAIHKAAPVLARLA 202 (352)
T ss_pred ------ccCCCEE-----EEecC--------CCCceEeeccceEEEEEEEEecccccCC-C-ccCcCHHHHHHHHHHHHH
Confidence 0112222 12232 1223667899999999999999999997 8 699999999999999998
Q ss_pred HHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHH
Q 016853 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 304 (381)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~ 304 (381)
++..+... . . +.. .+.+++++.|++ |...|+||++|++++|+|++|+++.++++++|+++++..+
T Consensus 203 ~~~~~~~~---~-~-------~~~-~~~~~~~~~i~g-G~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~-- 267 (352)
T PRK13007 203 AYEPREVV---V-D-------GLT-YREGLNAVRISG-GVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGFA-- 267 (352)
T ss_pred Hhcccccc---c-C-------CCC-ccceeEeEeEec-CCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhcccc--
Confidence 86543110 0 0 011 145889999998 8999999999999999999999999999999998876432
Q ss_pred cCceEEEEEeccCCC--ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEE
Q 016853 305 RSVSCIVERKHDANA--VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLL 373 (381)
Q Consensus 305 ~~~~v~~~~~~~~~~--~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~ 373 (381)
++++. ...++ ...++++++.+.++ +|.. +. +..|+||+++++.. +|++.+.
T Consensus 268 ---~~~~~--~~~~~~~~~~~~~~~~~~~~~----~g~~-------~~--~~~g~td~~~~~~~Gip~v~~G 321 (352)
T PRK13007 268 ---EVEVT--DLAPGARPGLDHPAAAALVAA----VGGE-------VR--AKYGWTDVARFSALGIPAVNFG 321 (352)
T ss_pred ---EEEee--cccCCCCCCCCCHHHHHHHHH----hCCC-------Cc--cccccchHHHHHhCCCCEEEeC
Confidence 34433 22333 23567777777765 3432 12 23477999999887 9988643
No 49
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=9.5e-34 Score=282.79 Aligned_cols=313 Identities=15% Similarity=0.128 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcC---CCCEEEEecCCCCCCCeEEEeecccCCcCC------------------------
Q 016853 5 SVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------------ 57 (381)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~---~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------------ 57 (381)
+.++++||.++|+++||++++.+ ..|+++++.|.++++|+|+|+||+||||.+
T Consensus 42 ~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~l 121 (464)
T PRK09104 42 CRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVI 121 (464)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceE
Confidence 57899999999999999987533 347999997654456999999999999842
Q ss_pred ---CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHH
Q 016853 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (381)
Q Consensus 58 ---g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~ 134 (381)
|+.|||++++++|+|+++|++.+. .++++|.|+|++|||+++ .|.+.++.. .
T Consensus 122 yGRG~~D~Kg~laa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~~------------------~ 176 (464)
T PRK09104 122 VARGASDDKGQLMTFVEACRAWKAVTG--SLPVRVTILFEGEEESGS-----PSLVPFLEA------------------N 176 (464)
T ss_pred EEecccCCcHHHHHHHHHHHHHHHhcC--CCCCcEEEEEECccccCC-----ccHHHHHHh------------------h
Confidence 346999999999999999998764 688999999999999853 355554310 0
Q ss_pred HHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEe--cCCCCCCCCCCCCCCH
Q 016853 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG--SQGHAGTVPMSMRQDP 212 (381)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G--~~~Hs~~~p~~~g~NA 212 (381)
.. .+.+|.+ +..|++. +.+....+..++||..+++|+++| +++|||..| ..+.||
T Consensus 177 ~~--------------~~~~d~~-----iv~E~~~---~~~~~~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~-~~g~na 233 (464)
T PRK09104 177 AE--------------ELKADVA-----LVCDTGM---WDRETPAITTSLRGLVGEEVTITAADRDLHSGLFG-GAAANP 233 (464)
T ss_pred HH--------------hcCCCEE-----EEeCCCC---CCCCCeEEEeecCCeEEEEEEEEeCCCCccccccC-CccCCH
Confidence 00 0112222 1223221 011122366789999999999999 689999757 689999
Q ss_pred HHHHHHHHHHHHHHhcCC-CC-------ccc-----------cCCC-CC-Ccc-ccc-----------CCCCeEEEEEEE
Q 016853 213 MTAAAELIVLLERLCKHP-KD-------FLS-----------YDGR-SN-CST-LES-----------LSSSLVCTVGEI 259 (381)
Q Consensus 213 i~~~~~~i~~l~~~~~~~-~~-------~~~-----------~~~~-~~-~~~-~~p-----------~~~~~ti~~~~i 259 (381)
+..+++++.+|++...+. .. .++ .... +. ... ..| ....+++|++.|
T Consensus 234 i~~~~~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i 313 (464)
T PRK09104 234 IRVLTRILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGI 313 (464)
T ss_pred HHHHHHHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEecc
Confidence 999999999987632110 00 000 0000 00 000 001 012468999999
Q ss_pred EecCC----CCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHH
Q 016853 260 SSWPS----ASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSA 333 (381)
Q Consensus 260 ~g~g~----~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a 333 (381)
++ |. ..|+||++|++.+|+|++|+++++++.++|++++.... ..+.++++......|++ +.++++++.+.++
T Consensus 314 ~g-g~~~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~v~~l~~~ 391 (464)
T PRK09104 314 WG-GYTGEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHDHGGSPAIALPYDSPALAAAKAA 391 (464)
T ss_pred cc-CCCCCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEecCCCCceECCCCCHHHHHHHHH
Confidence 98 64 57999999999999999999999999999999886531 13445555444344553 4678899999999
Q ss_pred HHHHHhhccCCCCcccccccCcccH-HHHHHhh-h-cCeEEEEE
Q 016853 334 SYAALKRMTGATQHEIPVIMSGAGH-DAMAMSH-L-TKVCSLLC 374 (381)
Q Consensus 334 ~~~~~g~~~~~~~~~~~~~~~~g~t-D~~~~~~-~-~p~~~~~~ 374 (381)
++++++..+ ....++|++ |++.|.+ . +|++++..
T Consensus 392 ~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~gip~v~~g~ 428 (464)
T PRK09104 392 LSDEWGKPA-------VLIGSGGSIPIVGDFKRILGMDSLLVGF 428 (464)
T ss_pred HHHHhCCCc-------eecCCCCcHHHHHHHHHHhCCCEEEecC
Confidence 999987642 222344444 4566654 3 88885443
No 50
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=280.19 Aligned_cols=285 Identities=22% Similarity=0.202 Sum_probs=203.0
Q ss_pred HHHHHHHHHHHHHHHcCC-EEEEc---CCCCEEEEecCCCCCCCeEEEeecccCCcCC----------------------
Q 016853 4 ASVRAGNLIRQWMEDAGL-RTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~-~~~~~---~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------------- 57 (381)
+|.++++||.++|+++|| ++++. ..+|+++++++.. ++|+|+|+|||||||++
T Consensus 42 ~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~-~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGr 120 (449)
T PRK07907 42 EVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPP-GAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGR 120 (449)
T ss_pred hHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCC-CCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEEC
Confidence 478999999999999998 77653 4578999997643 46899999999999973
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHH
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~ 137 (381)
|+.|||++++++|+|+++| +. .++++|.+++++|||+++ .|+++++.... +
T Consensus 121 G~~D~Kg~~aa~l~a~~~l---~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~~~~---------------~---- 171 (449)
T PRK07907 121 GAADDKGGIAMHLAALRAL---GG--DLPVGVTVFVEGEEEMGS-----PSLERLLAEHP---------------D---- 171 (449)
T ss_pred CccCCcHHHHHHHHHHHHh---cc--CCCCcEEEEEEcCcccCC-----ccHHHHHHhch---------------H----
Confidence 7789999999999999999 33 577999999999999853 47777652100 0
Q ss_pred CCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEE--ecCCCCCCCCCCCCCCHHHH
Q 016853 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVR--GSQGHAGTVPMSMRQDPMTA 215 (381)
Q Consensus 138 ~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~--G~~~Hs~~~p~~~g~NAi~~ 215 (381)
.+++|.+ +..|++.. ..+. ..+..++||..+++++++ |+++|||..+ ..+.||+..
T Consensus 172 -------------~~~~d~~-----iv~E~~~~--~~~~-p~i~~~~kG~~~~~l~v~~~G~~~Hss~~~-~~~~nAi~~ 229 (449)
T PRK07907 172 -------------LLAADVI-----VIADSGNW--SVGV-PALTTSLRGNADVVVTVRTLEHAVHSGQFG-GAAPDALTA 229 (449)
T ss_pred -------------hhcCCEE-----EEecCCcC--CCCC-eEEEEecCCcEEEEEEEEECCCCCCCcccc-ccCCCHHHH
Confidence 0112221 12233211 0011 126678999999999999 8899999744 568999999
Q ss_pred HHHHHHHHHHHhcCC-CCccc-c-CC---CCC---------C----------cccccCCCCeEEEEEEEEec--CCCCce
Q 016853 216 AAELIVLLERLCKHP-KDFLS-Y-DG---RSN---------C----------STLESLSSSLVCTVGEISSW--PSASNV 268 (381)
Q Consensus 216 ~~~~i~~l~~~~~~~-~~~~~-~-~~---~~~---------~----------~~~~p~~~~~ti~~~~i~g~--g~~~Nv 268 (381)
+++++.+|++...+. ...+. . .. ... . .........++++++.|+++ |.+.|+
T Consensus 230 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nv 309 (449)
T PRK07907 230 LVRLLATLHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNA 309 (449)
T ss_pred HHHHHHhhCCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCE
Confidence 999999998653210 00000 0 00 000 0 00000123568999999862 468899
Q ss_pred eCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhhc
Q 016853 269 IPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAALKRM 341 (381)
Q Consensus 269 IP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~~ 341 (381)
||++|++++|+|++|+++.++++++|+++++.. ..++.+++++....++++ ..++++++.+.+++++++|.+
T Consensus 310 IP~~a~~~~diR~~p~~~~e~v~~~l~~~l~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~a~~~~~g~~ 383 (449)
T PRK07907 310 LPPSARARLSLRVAPGQDAAEAQDALVAHLEAH-APWGAHVTVERGDAGQPFAADASGPAYDAARAAMREAWGKD 383 (449)
T ss_pred ecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhc-CCCCcEEEEEECCCcCceeCCCCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999998764 223556666654444554 367889999999999998764
No 51
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=6.8e-34 Score=272.53 Aligned_cols=276 Identities=18% Similarity=0.200 Sum_probs=207.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC-------------CCCcChHHHH
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------GIFDGSLGII 67 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------g~~D~k~gia 67 (381)
.|++|.++++||.++|+++|++++.+..+|+++.. +. ++|+|+|+|||||||.. |+.|||++++
T Consensus 12 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~-~~--~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~a 88 (336)
T TIGR01902 12 PSGKEANAAKFLEEISKDLGLKLIIDDAGNFILGK-GD--GHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLI 88 (336)
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEECCCCcEEEEe-CC--CCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHH
Confidence 47889999999999999999999777778998876 32 35999999999999843 7889999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhh
Q 016853 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESL 147 (381)
Q Consensus 68 a~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~ 147 (381)
++|+|+++|++. .++|.+++++|||++ ..|++.++...
T Consensus 89 a~l~a~~~l~~~------~~~i~~~~~~dEE~g-----~~G~~~~~~~~------------------------------- 126 (336)
T TIGR01902 89 AMIFATWLLNEK------GIKVIVSGLVDEESS-----SKGAREVIDKN------------------------------- 126 (336)
T ss_pred HHHHHHHHHHhC------CCcEEEEEEeCcccC-----CccHHHHHhhc-------------------------------
Confidence 999999999864 358999999999985 36888775210
Q ss_pred hhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 016853 148 LQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLC 227 (381)
Q Consensus 148 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~ 227 (381)
.++ ++ +..||. + ...+..+++|..+++++++|+++|+|. | . ||+..+.+++..|.+..
T Consensus 127 -----~~~--~~---ii~ept------~-~~~i~~~~kG~~~~~v~~~G~~~Hss~-~-~---~ai~~~~~~~~~l~~~~ 184 (336)
T TIGR01902 127 -----YPF--YV---IVGEPS------G-AEGITLGYKGSLQLKIMCEGTPFHSSS-A-G---NAAELLIDYSKKIIEVY 184 (336)
T ss_pred -----CCC--EE---EEecCC------C-CcceeeeeeeEEEEEEEEEecCcccCC-C-h---hHHHHHHHHHHHHHHHh
Confidence 011 11 122321 1 112667899999999999999999997 7 3 59999999999987432
Q ss_pred cCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCc
Q 016853 228 KHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 307 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~ 307 (381)
.... .. ..++++++.+++ |.+.|+||++|++++|+|++|+++++++.+++++ ...+
T Consensus 185 ~~~~---------------~~-~~~~~~~~~i~g-g~~~nvIP~~a~~~idiR~~p~~~~~~~~~~i~~-------~~~~ 240 (336)
T TIGR01902 185 KQPE---------------NY-DKPSIVPTIIRF-GESYNDTPAKLELHFDLRYPPNNKPEEAIKEITD-------KFPI 240 (336)
T ss_pred cccc---------------CC-CCCcceeEEEEc-cCCCcCCCceEEEEEEEeeCCCCCHHHHHHHHHh-------ccCc
Confidence 2110 11 134788899999 8999999999999999999999999998887765 1233
Q ss_pred eEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh--cCeEEEEEeeCC
Q 016853 308 SCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL--TKVCSLLCRLNN 378 (381)
Q Consensus 308 ~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~~~~~ 378 (381)
+ ++.....+|+ ..++++++.+.++++++. .. +....++|+||+++|++. +|++ .|.|+..
T Consensus 241 ~--~~~~~~~~p~~~~~~~~lv~~~~~a~~~~~-~~-------~~~~~~~g~tD~~~~~~~~g~p~v-~~Gpg~~ 304 (336)
T TIGR01902 241 C--LEIVDETPPYKVSRNNPLVRAFVRAIRKQG-MK-------PRLKKKTGTSDMNILAPIWTVPMV-AYGPGDS 304 (336)
T ss_pred e--EEEEeccCceecCCCCHHHHHHHHHHHHcC-CC-------eEEeeccccCccceeccccCCCeE-EECCCCc
Confidence 3 3333345554 467889999999999863 22 222234577999999875 6666 4666643
No 52
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.1e-33 Score=270.14 Aligned_cols=279 Identities=16% Similarity=0.090 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCCC----CEEEEecCCCCCCCeEEEeecccCCcCC--------------------CC
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDHLG----NVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GI 59 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~g----nv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------------g~ 59 (381)
+|.++++||.++|+ |+++++++.+ |+++.. | +|+|+|+||+||||.+ |+
T Consensus 28 ~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~-g----~~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa 100 (364)
T PRK08737 28 TTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVR-G----TPKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGV 100 (364)
T ss_pred CcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEc-C----CCeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECc
Confidence 57899999999997 9998877654 888863 3 3799999999999963 67
Q ss_pred CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCC
Q 016853 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (381)
Q Consensus 60 ~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g 139 (381)
.|||++++++|+|++. +.++|.++|++|||.++ ..|++.++. .+
T Consensus 101 ~DmKg~~aa~l~a~~~---------~~~~v~~~~~~dEE~g~----~~g~~~~~~-----------------------~~ 144 (364)
T PRK08737 101 CDIKGAAAALLAAANA---------GDGDAAFLFSSDEEAND----PRCVAAFLA-----------------------RG 144 (364)
T ss_pred ccchHHHHHHHHHHHc---------cCCCEEEEEEcccccCc----hhhHHHHHH-----------------------hC
Confidence 7999999999999752 24689999999999852 236666541 01
Q ss_pred CChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHH
Q 016853 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAEL 219 (381)
Q Consensus 140 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~ 219 (381)
. ++|.+ +..| +....++.++||..+++|+++|+++|+|. |++.|.|||..++++
T Consensus 145 ~------------~~~~~-----iv~E--------pt~~~~~~~~kG~~~~~v~v~Gk~aHas~-p~~~G~NAI~~~~~~ 198 (364)
T PRK08737 145 I------------PYEAV-----LVAE--------PTMSEAVLAHRGISSVLMRFAGRAGHASG-KQDPSASALHQAMRW 198 (364)
T ss_pred C------------CCCEE-----EEcC--------CCCceeEEecceeEEEEEEEEeeccccCC-CcccCCCHHHHHHHH
Confidence 1 11211 1112 22344678999999999999999999998 525899999999999
Q ss_pred HHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHH
Q 016853 220 IVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLY 299 (381)
Q Consensus 220 i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~ 299 (381)
|.++.+....... +.+ ++. .+.++|++.|+| |.+.|+||++|++++|+|+.|.++.++++++|+++++
T Consensus 199 l~~~~~~~~~~~~-----~~~-----~~~-~~~t~~vg~i~G-G~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~ 266 (364)
T PRK08737 199 GGQALDHVESLAH-----ARF-----GGL-TGLRFNIGRVEG-GIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAE 266 (364)
T ss_pred HHHHHHHHHhhhh-----hcc-----CCC-CCCceEEeeEec-CCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHH
Confidence 9887654321100 000 011 246999999999 8999999999999999999999999999999987665
Q ss_pred HHHHHcCceEEEEEec-cCCCcc-CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEee
Q 016853 300 QICEKRSVSCIVERKH-DANAVM-CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 300 ~~~~~~~~~v~~~~~~-~~~~~~-~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~~ 376 (381)
. ...++++++.. .+++.. +.++++..+..++.+..+.+ +.. ..+++||+++|++. +|+++ |.|+
T Consensus 267 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~tDa~~~~~~Gip~v~-~GpG 333 (364)
T PRK08737 267 P----AAATFEETFRGPSLPSGDIARAEERRLAARDVADALDLP-------IGN-AVDFWTEASLFSAAGYTALV-YGPG 333 (364)
T ss_pred H----cCCceEEEeccCCCCCcccCcchHHHHHHHHHHhhhcCC-------CCc-eeccccCHHHHHHcCCCEEE-ECCC
Confidence 4 23344443322 334433 22345554444444443432 111 23468999999877 99985 5554
No 53
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=5.4e-33 Score=277.61 Aligned_cols=309 Identities=15% Similarity=0.052 Sum_probs=209.8
Q ss_pred HHHHHHHHHH----HHHHHcCCEEEEcC------CCCEEEEecCCCCCCCeEEEeecccCCcCC----------------
Q 016853 4 ASVRAGNLIR----QWMEDAGLRTWVDH------LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------- 57 (381)
Q Consensus 4 ~E~~~~~~l~----~~l~~~G~~~~~~~------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------- 57 (381)
++.++++|+. ++|+++||++++.. ..|+++++.+.. ++|+|+|+||+||||.+
T Consensus 38 ~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~-~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~ 116 (469)
T PRK07079 38 RAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDD-ALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEE 116 (469)
T ss_pred cHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCC-CCCEEEEEcccCCCCCChHHhcccCCCCccccc
Confidence 4557777775 58999999987532 247999986543 35899999999999841
Q ss_pred -------CCCcChHHHHHHHHHHHHHHh-cCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCC
Q 016853 58 -------GIFDGSLGIITAISALKVLKS-TGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGV 129 (381)
Q Consensus 58 -------g~~D~k~giaa~l~a~~~l~~-~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~ 129 (381)
|+.|||++++++|+|+++|++ .+. .++++|.|++++|||+++ .|++.++....
T Consensus 117 dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~--~~~~~i~~~~~~dEE~g~-----~G~~~l~~~~~------------ 177 (469)
T PRK07079 117 GDRWYGRGTADNKGQHTINLAALEQVLAARGG--RLGFNVKLLIEMGEEIGS-----PGLAEVCRQHR------------ 177 (469)
T ss_pred CCEEEEEeccCCcHHHHHHHHHHHHHHHhcCC--CCCCCEEEEEECccccCC-----ccHHHHHHHhH------------
Confidence 677999999999999999865 345 788999999999999853 58887752100
Q ss_pred cHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEec--CCCCCCCCCC
Q 016853 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS--QGHAGTVPMS 207 (381)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~--~~Hs~~~p~~ 207 (381)
+ .+++|.+ +..|++.. ......+++++||..+++|+++|+ +.||+. +..
T Consensus 178 -------~-------------~~~~d~~-----iv~e~~~~---~~~~~~i~~g~kG~~~~~v~v~G~~~~~hs~~-~~g 228 (469)
T PRK07079 178 -------E-------------ALAADVL-----IASDGPRL---SAERPTLFLGSRGAVNFRLRVNLRDGAHHSGN-WGG 228 (469)
T ss_pred -------H-------------hcCCCEE-----EEeCCCcc---CCCCeEEEEecceEEEEEEEEeeCCCCCCCCc-ccc
Confidence 0 0122322 12232211 111223778999999999999998 457664 213
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCC-CC----------------ccccCCC-----C------CCcc-cccCCCCeEEEEEE
Q 016853 208 MRQDPMTAAAELIVLLERLCKHP-KD----------------FLSYDGR-----S------NCST-LESLSSSLVCTVGE 258 (381)
Q Consensus 208 ~g~NAi~~~~~~i~~l~~~~~~~-~~----------------~~~~~~~-----~------~~~~-~~p~~~~~ti~~~~ 258 (381)
.+.||+..++++|.++.+...+. .. .+..... + .... ..+....+++|++.
T Consensus 229 ~~~nai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~ 308 (469)
T PRK07079 229 LLRNPGTVLAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLA 308 (469)
T ss_pred ccCCHHHHHHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEe
Confidence 44799999999999885422110 00 0000000 0 0000 00112346899999
Q ss_pred EEecC---CCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHH
Q 016853 259 ISSWP---SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSA 333 (381)
Q Consensus 259 i~g~g---~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a 333 (381)
|++ | ...|+||++|++++|+|++|++++++++++|+++++... ..++++++....+++ +.++++++.+.++
T Consensus 309 i~g-G~~~~~~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~---~~~v~~~~~~~~~p~~~~~~~~~v~~l~~a 384 (469)
T PRK07079 309 FKT-GNPDAPVNAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHG---FPMVEVTVERGSPATRLDPDDPWVRWALAS 384 (469)
T ss_pred eec-CCCCCcceEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC---CCCeEEEEeCCCCceecCCCCHHHHHHHHH
Confidence 999 6 368999999999999999999999999999999987631 113555555555554 4678899999999
Q ss_pred HHHHHhhccCCCCcccccccCcccHHHHHHhh-h-cCeEE
Q 016853 334 SYAALKRMTGATQHEIPVIMSGAGHDAMAMSH-L-TKVCS 371 (381)
Q Consensus 334 ~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~-~-~p~~~ 371 (381)
+++++|..| ......++++|+++|.. . +|+++
T Consensus 385 ~~~~~g~~~------~~~~~~~g~~d~~~~~~~~giP~v~ 418 (469)
T PRK07079 385 IARTTGKKP------ALLPNLGGSLPNDVFADILGLPTLW 418 (469)
T ss_pred HHHHhCCCC------ceecCCCcchhHHHHHHHhCCCEEE
Confidence 999887642 11112346679888875 3 99984
No 54
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-33 Score=258.70 Aligned_cols=303 Identities=18% Similarity=0.168 Sum_probs=223.0
Q ss_pred HHHHHHHHHHHHcCCEEEEcCC----CCEEEEecCCCCCCCeEEEeecccCCcCC----------------------CCC
Q 016853 7 RAGNLIRQWMEDAGLRTWVDHL----GNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GIF 60 (381)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~~----gnv~a~~~g~~~~~~~i~l~~H~DtVp~~----------------------g~~ 60 (381)
++++|+.+..+++|+.++.... -+++.+|+|++|+.++|+|++|+||||+- |+.
T Consensus 49 a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~e~W~h~Pfsa~~~~~g~IyaRGaq 128 (420)
T KOG2275|consen 49 ACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFREKWTHPPFSAFKDEDGNIYARGAQ 128 (420)
T ss_pred HHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCcccCccCCccccccCCCcEEecccc
Confidence 7899999999999998754332 35899999999889999999999999852 888
Q ss_pred cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCC
Q 016853 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (381)
Q Consensus 61 D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~ 140 (381)
|||..++++|.|++.|+..|. ++.++|.+.|++|||.++ -.|++.++...+-. .++.+..+
T Consensus 129 D~K~~~va~leAir~L~~~g~--kp~Rti~lsfvpDEEi~G----~~Gm~~fa~~~~~~----~l~~~fil--------- 189 (420)
T KOG2275|consen 129 DMKCVGVAYLEAIRNLKASGF--KPKRTIHLSFVPDEEIGG----HIGMKEFAKTEEFK----KLNLGFIL--------- 189 (420)
T ss_pred chHhHHHHHHHHHHHHHhcCC--CcCceEEEEecCchhccC----cchHHHHhhhhhhc----ccceeEEe---------
Confidence 999999999999999999998 899999999999999984 45888776311000 01111100
Q ss_pred ChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 016853 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (381)
Q Consensus 141 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i 220 (381)
| |++. . +..-..+.+++||..+++|+++|+++|+|..| . ..|+.++.+++
T Consensus 190 --------------D----------EG~~-s--e~d~~~vfyaEkg~w~~~v~~~G~~GHss~~~-~--nTa~~~l~klv 239 (420)
T KOG2275|consen 190 --------------D----------EGGA-T--ENDFATVFYAEKGPWWLKVTANGTPGHSSYPP-P--NTAIEKLEKLV 239 (420)
T ss_pred --------------c----------CCCC-C--cccceeEEEEeeceeEEEEEecCCCCCCCCCC-C--ccHHHHHHHHH
Confidence 0 1110 0 11112356789999999999999999999844 3 68999999999
Q ss_pred HHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHH-HHHHH
Q 016853 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYEL-SNQLY 299 (381)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i-~~~~~ 299 (381)
.++.+.+.+..+.++..+.. .....+|+|++.|+| |.+.|++|.+.++.+|+|..+..+.+++++++ +++++
T Consensus 240 ~~~~~fr~~q~~~l~~~p~~------~~~~vtT~Nv~~i~G-Gv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~ 312 (420)
T KOG2275|consen 240 ESLEEFREKQVDLLASGPKL------ALGDVTTINVGIING-GVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAE 312 (420)
T ss_pred HHHHHhHHHHHHHhhcCCce------eccceeEEeeeeeec-ccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhh
Confidence 99998874333322211111 223578999999999 89999999999999999999999999999999 66665
Q ss_pred HHHHHcCceEEEEEec--cCCC---ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEE
Q 016853 300 QICEKRSVSCIVERKH--DANA---VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLL 373 (381)
Q Consensus 300 ~~~~~~~~~v~~~~~~--~~~~---~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~ 373 (381)
+.. .++++++.... .+++ ...+.+.|..+..++++..++. .+.. . .|+||.+++++. +|.. -|
T Consensus 313 ~~~--eg~t~~f~~~~~~~~~~~t~~~~s~p~w~~~~~a~~~~~~k~------~~~i-~-~gstdsr~~rn~gvp~~-~f 381 (420)
T KOG2275|consen 313 EAG--EGVTLEFSQKVILDYPPVTPTDDSNPFWTAFAGALKDEGGKG------YPEI-G-PGSTDSRHIRNEGVPAI-GF 381 (420)
T ss_pred hcC--CceEEeccCcccCCCCCCCCCCCCChHHHHHHHHHHHhcCcc------ceee-c-ccccccchhhhcCcchh-cc
Confidence 421 23444443321 2332 2356789999999999986542 2333 3 388999999998 6665 44
Q ss_pred Eee
Q 016853 374 CRL 376 (381)
Q Consensus 374 ~~~ 376 (381)
.|+
T Consensus 382 sp~ 384 (420)
T KOG2275|consen 382 SPI 384 (420)
T ss_pred ccc
Confidence 444
No 55
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=5.5e-32 Score=269.55 Aligned_cols=328 Identities=16% Similarity=0.109 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------CCCcC
Q 016853 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIFDG 62 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------------g~~D~ 62 (381)
.++.++++|+.++|+++||+++... |+++.+.+.. +.|+|+|+|||||||++ |+.||
T Consensus 42 ~~~~~~~~~~~~~~~~~G~~~~~~~--~~~~~~~~~~-~~~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~ 118 (466)
T TIGR01886 42 PGPVDALTKFLSFAERDGFTTKNFD--NYAGHVEYGA-GDERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDD 118 (466)
T ss_pred hhHHHHHHHHHHHHHHCCCeEEEec--CCceeEEecC-CCCEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCcccc
Confidence 4678899999999999999986432 4434332222 35899999999999974 67799
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCC-ccccccccCCCCcHHHHHHHCCCC
Q 016853 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP-VSALRVSDKSGVTVLDALRENSID 141 (381)
Q Consensus 63 k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~-~~~~~~~d~~g~~~~~~~~~~g~~ 141 (381)
|++++++|+|+++|++.++ .++++|.+++++|||++ ..|+++++..-. +...-..|..-..+ .|..
T Consensus 119 Kg~~~a~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g-----~~g~~~~~~~~~~~d~~~~~d~~~~~~------~ge~ 185 (466)
T TIGR01886 119 KGPSLAAYYAMKILKELGL--PPSKKIRFVVGTNEETG-----WVDMDYYFKHEETPDFGFSPDAEFPII------NGEK 185 (466)
T ss_pred chHHHHHHHHHHHHHHhCC--CCCCCEEEEEECccccC-----cccHHHHHhcCcCCCEEEECCCCceeE------EEec
Confidence 9999999999999999997 78999999999999985 368887763211 00000000000000 0000
Q ss_pred hhhhhhhhccCC-Cc-cchheeeecccCCcccccCCCc-ceEE---------------Eeeecc---------eEEEEEE
Q 016853 142 IAEESLLQLKYD-PA-SVWGYIEVHIEQGPVLEWVGFP-LGVV---------------QGIAGQ---------TRLKVTV 194 (381)
Q Consensus 142 ~~~~~~~~~~~~-~d-~~~~~~~~~~~~~~~~~~~~~~-~~~~---------------~g~~g~---------~~~~i~v 194 (381)
+.... ....+ +. .....+.+| .|...+..+.. ..++ .+++|. .+++|++
T Consensus 186 g~~~~--~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~i~v 261 (466)
T TIGR01886 186 GNFTL--ELSFKGDNKGDYVLDSFK--AGLAENMVPQVARAVISGPDAEALKAAYESFLADKASLDGSFEINDESATIVL 261 (466)
T ss_pred ceEEE--EEEEecCCCCceeEEEEE--cCCcCCccCCeeEEEEecCCHHHHHHHHHHHHhhccCceEEEEEeCCEEEEEE
Confidence 00000 00000 00 000000000 01111100000 0011 123443 3799999
Q ss_pred EecCCCCCCCCCCCCCCHHHHHHHHHHHH----------HHHhcCCCCcccc-CCCCCCcccccCCCCeEEEEEEEEecC
Q 016853 195 RGSQGHAGTVPMSMRQDPMTAAAELIVLL----------ERLCKHPKDFLSY-DGRSNCSTLESLSSSLVCTVGEISSWP 263 (381)
Q Consensus 195 ~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l----------~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~ti~~~~i~g~g 263 (381)
+|+++|+|. | +.|+|||..|++++.++ +.+... +. .++ .........++..+.+|+|++.|++ |
T Consensus 262 ~G~~aH~s~-P-~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~~~~~~~~~g~~S~nvgvI~g-G 336 (466)
T TIGR01886 262 IGKGAHGAA-P-QVGINSATFLALFLNQYAFAGGAKNFIHFLAEV-EH-EDFYGEKLGIAFHDELMGDLAMNAGMFDF-D 336 (466)
T ss_pred EeeEcccCC-C-CCCcCHHHHHHHHHHhccCChhHHHHHHHHHHh-cC-CCCCcccCCCcccccCcCceEEEeEEEEE-e
Confidence 999999997 9 79999999999998873 222110 00 000 0000001124555688999999999 5
Q ss_pred CCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC-ccCCHHHHHHHHHHHHHHHhhcc
Q 016853 264 SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA-VMCDADLSSQLKSASYAALKRMT 342 (381)
Q Consensus 264 ~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~g~~~ 342 (381)
.. | ++|++.+|+|++|+++.+++.++|++.++. .+++++......|. .+.++++++.+.+++++++|.+
T Consensus 337 ~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~~~~~~~~P~~~~~ds~lv~~l~~a~~~v~G~~- 406 (466)
T TIGR01886 337 HA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVTYNGHFEEPHYVPGSDPLVQTLLKVYEKHTGKK- 406 (466)
T ss_pred cC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEEEecccCCCcccCCCCHHHHHHHHHHHHHhCCC-
Confidence 54 3 899999999999999999999999988763 23443321112232 3456799999999999998764
Q ss_pred CCCCcccccccCcccHHHHHHhhhcCeEE
Q 016853 343 GATQHEIPVIMSGAGHDAMAMSHLTKVCS 371 (381)
Q Consensus 343 ~~~~~~~~~~~~~g~tD~~~~~~~~p~~~ 371 (381)
+.....+++||+++|...+|..+
T Consensus 407 ------~~~~~~~ggTDa~~~~~~i~~gv 429 (466)
T TIGR01886 407 ------GHEVIIGGGTYGRLLERGVAYGA 429 (466)
T ss_pred ------CceeeecCccHHHhccccccccc
Confidence 22224568899999986565554
No 56
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=1.1e-32 Score=274.96 Aligned_cols=327 Identities=19% Similarity=0.129 Sum_probs=202.8
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------CCCcCh
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIFDGS 63 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------------g~~D~k 63 (381)
++.++++||.++|+++||+++.. .|+++++.... +.++|+|+||+||||.+ |+.|||
T Consensus 44 ~~~~~~~~l~~~~~~~G~~~~~~--~n~~~~~~~~~-~~~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmK 120 (466)
T PRK07318 44 GPVKALEKFLEIAERDGFKTKNV--DNYAGHIEYGE-GEEVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDK 120 (466)
T ss_pred cHHHHHHHHHHHHHHCCCEEEEe--cCccceEEECC-CCCEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCc
Confidence 47789999999999999998643 47666654212 35899999999999963 677999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccc-cccCCCCcHHHHHHHCCCCh
Q 016853 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALR-VSDKSGVTVLDALRENSIDI 142 (381)
Q Consensus 64 ~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~-~~d~~g~~~~~~~~~~g~~~ 142 (381)
+|++++|+|+++|++.++ .++++|.++|++|||+++ .|+++++.......+. ..|.....+ ..+.|..
T Consensus 121 gg~aa~l~Al~~l~~~g~--~~~~~i~l~~~~DEE~g~-----~G~~~l~~~~~~~~~~~~~d~~~~vi---~~E~g~~- 189 (466)
T PRK07318 121 GPTMAAYYALKIIKELGL--PLSKKVRFIVGTDEESGW-----KCMDYYFEHEEAPDFGFSPDAEFPII---NGEKGIT- 189 (466)
T ss_pred HHHHHHHHHHHHHHHcCC--CCCccEEEEEEcccccCc-----hhHHHHHHhCCCCCEEEEeCCCCcEE---EEEeeeE-
Confidence 999999999999999987 778999999999999853 6899886421110000 001000000 0000000
Q ss_pred hhhhhhhccCCCccchheeeecccCCcccccCCCc-ce------------------EEEeeecc-----eEEEEEEEecC
Q 016853 143 AEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFP-LG------------------VVQGIAGQ-----TRLKVTVRGSQ 198 (381)
Q Consensus 143 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~------------------~~~g~~g~-----~~~~i~v~G~~ 198 (381)
................+ ...++|...+..+.. .. +..++||. .+++|+++|++
T Consensus 190 --~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~kG~~~~~~~~~~i~v~G~a 266 (466)
T PRK07318 190 --TFDLVHFEGENEGDYVL-VSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLAENGLKGELEEEGGKLVLTVIGKS 266 (466)
T ss_pred --EEEEEeccccCCCCcee-EEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHhhcCceEEEEecCCEEEEEEEeeE
Confidence 00000000000000000 011111110000000 00 01135554 48999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHH------HhcCCCCccc--cC-CCCCCcccccCCCCeEEEEEEEEecCCCCcee
Q 016853 199 GHAGTVPMSMRQDPMTAAAELIVLLER------LCKHPKDFLS--YD-GRSNCSTLESLSSSLVCTVGEISSWPSASNVI 269 (381)
Q Consensus 199 ~Hs~~~p~~~g~NAi~~~~~~i~~l~~------~~~~~~~~~~--~~-~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvI 269 (381)
+|+|. | +.|.|||..|++++.+|+. +.....+.++ +. ........+...+..|+|++.|++ |...
T Consensus 267 aH~s~-p-~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~nvg~i~g-g~~~--- 340 (466)
T PRK07318 267 AHGST-P-EKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAYEDDVMGDLTMNVGVFSF-DEEK--- 340 (466)
T ss_pred cccCC-C-ccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcccCCCccCeEEEeeEEEE-ecCc---
Confidence 99997 9 7999999999999999864 1100000000 00 000000012223467999999999 4321
Q ss_pred CCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC--ccCCHHHHHHHHHHHHHHHhhccCCCCc
Q 016853 270 PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA--VMCDADLSSQLKSASYAALKRMTGATQH 347 (381)
Q Consensus 270 P~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~l~~a~~~~~g~~~~~~~~ 347 (381)
+|++.+|+|++|+++.+++.++|++.+++ .+ ++++....+++ ...++++++.+.+++++++|.+
T Consensus 341 --~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~--~~~~~~~~~~p~~~~~d~~lv~~l~~a~~~~~g~~------ 406 (466)
T PRK07318 341 --GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TG--VELSEHEHQKPHYVPKDDPLVKTLLKVYEKQTGLK------ 406 (466)
T ss_pred --EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cC--eEEEEccCCCceeeCCCCHHHHHHHHHHHHHhCCC------
Confidence 79999999999999999999999988654 34 44444445555 3467889999999999987754
Q ss_pred ccccccCcccHHHHHHhhhcC
Q 016853 348 EIPVIMSGAGHDAMAMSHLTK 368 (381)
Q Consensus 348 ~~~~~~~~g~tD~~~~~~~~p 368 (381)
+....++|+||+++|...+|
T Consensus 407 -~~~~~~~ggtDa~~~~~~i~ 426 (466)
T PRK07318 407 -GEEQVIGGGTYARLLKRGVA 426 (466)
T ss_pred -CCeeEEcchHhHhhCCCeEE
Confidence 23334678999999976444
No 57
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=8.3e-32 Score=269.38 Aligned_cols=300 Identities=17% Similarity=0.143 Sum_probs=207.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCC--CCCCeEEEeecccCCcCCC--------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDAG-------------------- 58 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~--~~~~~i~l~~H~DtVp~~g-------------------- 58 (381)
.|++|.++++||.++|+++|+++++++.+|++++++|.. ++.|+|+|.|||||||++|
T Consensus 19 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~ 98 (477)
T TIGR01893 19 PSKNEKEVSNFIVNWAKKLGLEVKQDEVGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDW 98 (477)
T ss_pred CCccHHHHHHHHHHHHHHcCCeEEEeCCCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCE
Confidence 378899999999999999999999999999999997642 2458999999999999754
Q ss_pred -----C---CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhcc-CCccccccccCCCC
Q 016853 59 -----I---FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI-LPVSALRVSDKSGV 129 (381)
Q Consensus 59 -----~---~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~-l~~~~~~~~d~~g~ 129 (381)
+ .|||+|++++|++++. .+ .++++|.++|++|||.+ +.|++.+... +........|..+.
T Consensus 99 i~GrG~~lg~D~k~gva~~l~~~~~---~~---~~~~~i~~~~~~dEE~g-----~~Gs~~l~~~~~~~~~~~~~d~~~~ 167 (477)
T TIGR01893 99 LKARGTTLGADNGIGVAMGLAILED---NN---LKHPPLELLFTVDEETG-----MDGALGLDENWLSGKILINIDSEEE 167 (477)
T ss_pred EEECCccccccccHHHHHHHHHHhc---CC---CCCCCEEEEEEeccccC-----chhhhhcChhhcCCcEEEEecCCCC
Confidence 2 2999999988888654 44 45789999999999984 4689988531 22111111111000
Q ss_pred cHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEe-cCCCCCCCCCCC
Q 016853 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG-SQGHAGTVPMSM 208 (381)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G-~~~Hs~~~p~~~ 208 (381)
.....|..+ ......++++|++ ..++|..+++|+++| +++|||..|+ .
T Consensus 168 ----~~~~~g~~~-----------~~~~~~~~e~~~e---------------~~~kG~~~~~i~~~G~~~~Hsg~~p~-~ 216 (477)
T TIGR01893 168 ----GEFIVGCAG-----------GRNVDITFPVKYE---------------KFTKNEEGYQISLKGLKGGHSGADIH-K 216 (477)
T ss_pred ----CeEEEECCC-----------CeeEEEEEEEEEE---------------ecCCCceEEEEEEeCcCCCcCccccC-C
Confidence 000000000 0001112222321 115899999999999 9999987785 5
Q ss_pred C-CCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHH
Q 016853 209 R-QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGR 287 (381)
Q Consensus 209 g-~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~ 287 (381)
+ .||+.+++++|.+++... ..+++.+.| |.+.|+||++|++.+|+|....+..
T Consensus 217 ~r~nAi~~aa~~i~~l~~~~-------------------------~~~v~~~~g-g~~~N~ip~~~~~~~diR~~~~~~l 270 (477)
T TIGR01893 217 GRANANKLMARVLNELKENL-------------------------NFRLSDIKG-GSKRNAIPREAKALIAIDENDVKLL 270 (477)
T ss_pred CCcCHHHHHHHHHHhhhhcC-------------------------CeEEEEEeC-CCcccccCCceEEEEEEChhHHHHH
Confidence 5 699999999998887531 246788888 8999999999999999987777666
Q ss_pred HHHHHHHHHHHHHHHH----------------------------------------------------------------
Q 016853 288 ETVLYELSNQLYQICE---------------------------------------------------------------- 303 (381)
Q Consensus 288 ~~~~~~i~~~~~~~~~---------------------------------------------------------------- 303 (381)
+.+.+.+.+.++..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~ 350 (477)
T TIGR01893 271 ENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVFSENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKEN 350 (477)
T ss_pred HHHHHHHHHHHHHHhcccCCCeEEEEEECCCcccccCHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCC
Confidence 6666666555443331
Q ss_pred ----------------------------HcCceEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCccccccc
Q 016853 304 ----------------------------KRSVSCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIM 353 (381)
Q Consensus 304 ----------------------------~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~ 353 (381)
.++++ ++....++++ ..++++++.+.+++++++|.+ +....
T Consensus 351 ~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~--v~~~~~~~p~~~~~d~plv~~l~~a~~~~~g~~-------~~~~~ 421 (477)
T TIGR01893 351 KVIFTFLIRSSVESDKDYVTEKIESIAKLAGAR--VEVSAGYPSWQPDPQSNLLDTARKVYSEMFGED-------PEVKV 421 (477)
T ss_pred EEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeE--EEEecCCCcccCCCCCHHHHHHHHHHHHHHCCC-------CeEEE
Confidence 12333 3333345554 367889999999999998864 22234
Q ss_pred CcccHHHHHHhhhcCeE--EEEEeeC
Q 016853 354 SGAGHDAMAMSHLTKVC--SLLCRLN 377 (381)
Q Consensus 354 ~~g~tD~~~~~~~~p~~--~~~~~~~ 377 (381)
++|++|+++|++..|.+ +.|.|..
T Consensus 422 ~~Ggtd~~~~~~~~~~i~~v~~Gp~~ 447 (477)
T TIGR01893 422 IHAGLECGIISSKIPDIDMISIGPNI 447 (477)
T ss_pred eecCccHHHHHhhCCCceEEEeCCCC
Confidence 56889999998765542 4555543
No 58
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-30 Score=259.32 Aligned_cols=310 Identities=19% Similarity=0.162 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHcCCEEEEcCCCC-EEEEecCCCCCCCeEEEeecccCCcCC----------------------CCCcC
Q 016853 6 VRAGNLIRQWMEDAGLRTWVDHLGN-VHGRVEGLNASAQALLIGSHLDTVVDA----------------------GIFDG 62 (381)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~~~gn-v~a~~~g~~~~~~~i~l~~H~DtVp~~----------------------g~~D~ 62 (381)
.++++|+.++|+++||+++++..++ +++++ |. +.|+|+|+||+||||++ |+.||
T Consensus 41 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~-g~--~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~Dm 117 (444)
T PRK07205 41 QDVLEATLDLCQGLGFKTYLDPKGYYGYAEI-GQ--GEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDD 117 (444)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCeEEEEEe-cC--CCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccC
Confidence 6788999999999999988765443 55665 43 35899999999999973 77899
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCCh
Q 016853 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDI 142 (381)
Q Consensus 63 k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~ 142 (381)
|++++++|.|+++|++.++ .++++|.|+|++|||+++ .|++.+........ .....++.. .
T Consensus 118 Kgglaa~l~Al~~l~~~~~--~~~~~i~l~~~~dEE~g~-----~g~~~~~~~~~~~~-~~~~~~~~~--------~--- 178 (444)
T PRK07205 118 KGPSMAALYAVKALLDAGV--QFNKRIRFIFGTDEETLW-----RCMNRYNEVEEQAT-MGFAPDSSF--------P--- 178 (444)
T ss_pred cHHHHHHHHHHHHHHHcCC--CCCCcEEEEEECCcccCc-----ccHHHHHhCCCCCC-eeECCCCCC--------c---
Confidence 9999999999999999987 788999999999999853 46776652100000 000000000 0
Q ss_pred hhhhhhhccCCCccchhee--eecccC--------CcccccCCCcceEEEe-----------eecc----eEEEEEEEec
Q 016853 143 AEESLLQLKYDPASVWGYI--EVHIEQ--------GPVLEWVGFPLGVVQG-----------IAGQ----TRLKVTVRGS 197 (381)
Q Consensus 143 ~~~~~~~~~~~~d~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~g-----------~~g~----~~~~i~v~G~ 197 (381)
. .+ ...+.+ .+.-++ |..+...... ....| .+|. .+.+|+++|+
T Consensus 179 ---v----~~---~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~-~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~ 247 (444)
T PRK07205 179 ---L----TY---AEKGLLQAKLVGPGSDQLELEVGQAFNVVPAK-ASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGK 247 (444)
T ss_pred ---e----EE---EEeceEEEEEEeCCccceEEecCCcccccCce-eEEEecCHHHHHHHHHhcCceEeecCcEEEEEeE
Confidence 0 00 000000 011111 0000000000 00000 1231 3349999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHh-----cCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCe
Q 016853 198 QGHAGTVPMSMRQDPMTAAAELIVLLERLC-----KHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGE 272 (381)
Q Consensus 198 ~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~-----~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~ 272 (381)
++|||. | +.|.|||..+++++.+++... .+.+..............++..+.+++|++. .|+||++
T Consensus 248 ~~Hss~-p-~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~-------~nvvP~~ 318 (444)
T PRK07205 248 SVHAKD-A-PQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG-------LTITKEK 318 (444)
T ss_pred EcccCC-C-ccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE-------EEEECCE
Confidence 999997 8 699999999999998886531 0000000000000000001222456777754 4799999
Q ss_pred EEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC--ccCCHHHHHHHHHHHHHHHhhccCCCCcccc
Q 016853 273 VTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA--VMCDADLSSQLKSASYAALKRMTGATQHEIP 350 (381)
Q Consensus 273 a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~ 350 (381)
|++.+|+|++|+++.+++.++|++++++ .++++ +....+++ ...++++++.+.+++++.+|.. +.
T Consensus 319 a~~~ld~R~~p~~~~e~v~~~i~~~~~~----~~v~~--~~~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~-------~~ 385 (444)
T PRK07205 319 SEIRIDIRIPVLADKEKLVQQLSQKAQE----YGLTY--EEFDYLAPLYVPLDSELVSTLMSVYQEKTGDD-------SP 385 (444)
T ss_pred EEEEEEEeCCCCCCHHHHHHHHHHHHHH----cCcEE--EEecCCCceeeCCCcHHHHHHHHHHHHHhCCC-------Cc
Confidence 9999999999999999999999987654 34443 32233455 3467889999999999987753 22
Q ss_pred cccCcccHHHHHHhhhcCeEEEEE
Q 016853 351 VIMSGAGHDAMAMSHLTKVCSLLC 374 (381)
Q Consensus 351 ~~~~~g~tD~~~~~~~~p~~~~~~ 374 (381)
...++|++|+.++ +.++.|+
T Consensus 386 ~~~~gg~~~~~~~----~~~i~~G 405 (444)
T PRK07205 386 AQSSGGATFARTM----PNCVAFG 405 (444)
T ss_pred eEEeccHHHHHhC----CCcEEEC
Confidence 3345677776543 3344566
No 59
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-30 Score=261.40 Aligned_cols=335 Identities=17% Similarity=0.111 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHHcCCEEEEcCCCCEE--EEecCCCCCCCeEEEeecccCCcCC--------------------------
Q 016853 6 VRAGNLIRQWMEDAGLRTWVDHLGNVH--GRVEGLNASAQALLIGSHLDTVVDA-------------------------- 57 (381)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~~~gnv~--a~~~g~~~~~~~i~l~~H~DtVp~~-------------------------- 57 (381)
.++++||.++|+++|++++. .+|++ ++++|. +.|+|+|+|||||||++
T Consensus 75 ~~~~~~l~~~l~~~G~~~~~--~~~~v~~~~~~g~--~~~~l~l~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGR 150 (520)
T PRK06156 75 IGFKKLLKSLARDFGLDYRN--VDNRVLEIGLGGS--GSDKVGILTHADVVPANPELWVLDGTRLDPFKVTLVGDRLYGR 150 (520)
T ss_pred HHHHHHHHHHHHHCCCeEEe--cCCeEEEEEecCC--CCCeEEEEEecCccCCCCccCccCCccCCCCceEEECCEEEEc
Confidence 46789999999999999853 46754 677664 35899999999999852
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhcc-CCccccccccCCCCcHHHHHH
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI-LPVSALRVSDKSGVTVLDALR 136 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~-l~~~~~~~~d~~g~~~~~~~~ 136 (381)
|+.|||+|++++|+|+++|++.++ .++++|.++|++|||.++ .|++.+... ..+......|.+.-.+ .-
T Consensus 151 G~~D~Kgg~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~G~~~~~~~~~~~~~~~~~D~~~~~~---~~ 220 (520)
T PRK06156 151 GTEDDKGAIVTALYAMKAIKDSGL--PLARRIELLVYTTEETDG-----DPLKYYLERYTPPDYNITLDAEYPVV---TA 220 (520)
T ss_pred CcccchHHHHHHHHHHHHHHHcCC--CCCceEEEEEecccccCc-----hhHHHHHHhcCCCCeEEeeCCCCceE---EE
Confidence 567999999999999999999887 677999999999999853 588877531 1111111112111000 00
Q ss_pred HCCCChhhhhhhhc-cCCCccchheeeecccCCcccccCCCcc---------------------eEEEeeecce------
Q 016853 137 ENSIDIAEESLLQL-KYDPASVWGYIEVHIEQGPVLEWVGFPL---------------------GVVQGIAGQT------ 188 (381)
Q Consensus 137 ~~g~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~g~~------ 188 (381)
+.+... ..+... ......-... .++..|...+..+... ....+++|..
T Consensus 221 E~~~~~--~~i~~~~~~~~~~~~~l--~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 296 (520)
T PRK06156 221 EKGWGT--IMATFPKRAADGKGAEI--VAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAAQVKRHGGGFSIDFKR 296 (520)
T ss_pred ecceEE--EEEEecCcCCCCCceeE--EEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHHHHhhcccCceEEEEE
Confidence 000000 000000 0000000000 0111111110000000 0011122333
Q ss_pred ---EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCC-----CCcccc--C----CC-CCCcccccCCCCeE
Q 016853 189 ---RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHP-----KDFLSY--D----GR-SNCSTLESLSSSLV 253 (381)
Q Consensus 189 ---~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~-----~~~~~~--~----~~-~~~~~~~p~~~~~t 253 (381)
+++|+++|+++|+|. | +.|.|||..+++++.+|+++.... .+.+.. . .. .-....++..+..+
T Consensus 297 ~~~~~~I~v~Gk~aHsS~-P-~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g~~~~~~~~g~~t 374 (520)
T PRK06156 297 DGKDVTITVTGKSAHSST-P-ESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFGVAYKDDFMGPLT 374 (520)
T ss_pred cCCeEEEEEEeEECCCCC-C-CCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCCccccCCCccCcE
Confidence 899999999999997 9 799999999999999987521100 000000 0 00 00001123445678
Q ss_pred EEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC-ccCCHHHHHHHHH
Q 016853 254 CTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA-VMCDADLSSQLKS 332 (381)
Q Consensus 254 i~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~l~~ 332 (381)
++++.|++ |. +.|++++|+|++|+++.++++++|++.++.++..+++++++......|. ...++++++.+.+
T Consensus 375 ~~~~~I~g-g~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~~~~~p~~~~~d~~lv~~l~~ 447 (520)
T PRK06156 375 LSPTVVGQ-DD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDYYWGEPMVRDPKGPWLKTLLD 447 (520)
T ss_pred EeeeEEEE-eC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEeecCCCceeeCCCCHHHHHHHH
Confidence 89999998 44 6899999999999999999999999999887666677776653322332 2357789999999
Q ss_pred HHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 333 ASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 333 a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
++++++|.. +....++|+||++++ |.++.|+|+..
T Consensus 448 a~~~~~G~~-------~~~~~~~ggTDa~~~----~~~v~fGP~~~ 482 (520)
T PRK06156 448 VFGHFTGLD-------AKPVAIAGSTNAKLF----PNAVSFGPAMP 482 (520)
T ss_pred HHHHHhCCC-------CceeeecChhhhhhC----CccEEEcCCCC
Confidence 999988764 233356789999887 34778888644
No 60
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.97 E-value=8.1e-30 Score=253.71 Aligned_cols=294 Identities=16% Similarity=0.195 Sum_probs=207.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCC--CCCCeEEEeecccCCcCC---------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDA--------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~--~~~~~i~l~~H~DtVp~~--------------------- 57 (381)
+|++|.++++||.++|+++|+++++++.+|++++++++. .+.|+|+|.|||||||++
T Consensus 25 ~S~~e~~~~~~l~~~~~~~G~~~~~d~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~ 104 (485)
T PRK15026 25 PSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEW 104 (485)
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEEecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCE
Confidence 478899999999999999999999999999999986431 246899999999999863
Q ss_pred ----CC---CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCc
Q 016853 58 ----GI---FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (381)
Q Consensus 58 ----g~---~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~ 130 (381)
|. .|||+|++++|.++ ++.++ ++++|.++|++|||.+ +.|++.+......
T Consensus 105 l~g~Gt~lgaD~k~gva~~l~~l---~~~~~---~~~~i~~l~t~dEE~G-----~~ga~~l~~~~~~------------ 161 (485)
T PRK15026 105 VKARGTTLGADNGIGMASALAVL---ADENV---VHGPLEVLLTMTEEAG-----MDGAFGLQSNWLQ------------ 161 (485)
T ss_pred EEeCCccccCccHHHHHHHHHHH---HhCCC---CCCCEEEEEEcccccC-----cHhHHHhhhccCC------------
Confidence 33 49999999887764 55664 4889999999999984 4788876421100
Q ss_pred HHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCc---c-cccCC-C--cceEEEee----ecceEEEEEEEe-cC
Q 016853 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGP---V-LEWVG-F--PLGVVQGI----AGQTRLKVTVRG-SQ 198 (381)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~-~~~~~-~--~~~~~~g~----~g~~~~~i~v~G-~~ 198 (381)
++.+ +..|+.. + ..-.+ . ........ +|..+|+|+|+| ++
T Consensus 162 -----------------------~~~~-----i~~e~~~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~g 213 (485)
T PRK15026 162 -----------------------ADIL-----INTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKG 213 (485)
T ss_pred -----------------------cCEE-----EEeCCCCCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCC
Confidence 0100 1111110 0 00000 0 00011112 688899999999 99
Q ss_pred CCCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEE
Q 016853 199 GHAGTVPMSMRQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTV 277 (381)
Q Consensus 199 ~Hs~~~p~~~g~-NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~ 277 (381)
+||+..| +.|. |||..++++|.++. . .++++++.|+| |++.|+||++|++.+
T Consensus 214 gHsG~~i-~~g~~nAi~~la~~l~~~~---~----------------------~~~~~v~~i~G-G~~~NaIp~~a~a~i 266 (485)
T PRK15026 214 GHSGGEI-HVGLGNANKLLVRFLAGHA---E----------------------ELDLRLIDFNG-GTLRNAIPREAFATI 266 (485)
T ss_pred cCChHHH-CCCCccHHHHHHHHHHHhH---h----------------------hCCeEEEEEeC-CCccCCCCCCcEEEE
Confidence 9999778 7888 99999999998744 1 34789999999 899999999999999
Q ss_pred EeeCCChhHHHHHHHHHHHHHHHHH----------------------------------H-HcCc-----------e---
Q 016853 278 DLRAIDDAGRETVLYELSNQLYQIC----------------------------------E-KRSV-----------S--- 308 (381)
Q Consensus 278 diR~~p~~~~~~~~~~i~~~~~~~~----------------------------------~-~~~~-----------~--- 308 (381)
++|....+..+.+.+.+.+.+.+-- . .+|+ +
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~ 346 (485)
T PRK15026 267 AVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSL 346 (485)
T ss_pred EEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccccccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeee
Confidence 9998877777766665554443100 0 0010 0
Q ss_pred -----------EE--E----------------------------EEeccCCCcc--CCHHHHHHHHHHHHHHHhhccCCC
Q 016853 309 -----------CI--V----------------------------ERKHDANAVM--CDADLSSQLKSASYAALKRMTGAT 345 (381)
Q Consensus 309 -----------v~--~----------------------------~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~ 345 (381)
++ + +....+|++. .++++++.+.+++++++|++|
T Consensus 347 Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~~~~~~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~--- 423 (485)
T PRK15026 347 NVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTP--- 423 (485)
T ss_pred EEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC---
Confidence 00 0 1112356654 568899999999999998752
Q ss_pred CcccccccCcccHHHHHHhhhcCe--EEEEEeeCCC
Q 016853 346 QHEIPVIMSGAGHDAMAMSHLTKV--CSLLCRLNNL 379 (381)
Q Consensus 346 ~~~~~~~~~~g~tD~~~~~~~~p~--~~~~~~~~~~ 379 (381)
....+.+|+|++.|++..|. ++.|+|...+
T Consensus 424 ----~~~~ihaglEcG~~~~~~p~i~~VsfGP~~~~ 455 (485)
T PRK15026 424 ----NIQIIHAGLECGLFKKPYPEMDMVSIGPTITG 455 (485)
T ss_pred ----eEEEEEEEehHHHHHhhCCCCCEEEECCCCCC
Confidence 33345699999999988777 6788887643
No 61
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=99.97 E-value=2.3e-29 Score=249.02 Aligned_cols=327 Identities=20% Similarity=0.163 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEec-CCCCCCCeEEEeecccCCcCC--------------------CCCcC
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVE-GLNASAQALLIGSHLDTVVDA--------------------GIFDG 62 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~-g~~~~~~~i~l~~H~DtVp~~--------------------g~~D~ 62 (381)
++.++++||.++|+++||+++ ..+|+.+... +. +.|+|+|+|||||||.+ |+.||
T Consensus 32 ~~~~~~~~l~~~~~~~g~~~~--~~~~~~~~~~~~~--~~~~l~l~gH~D~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~ 107 (447)
T TIGR01887 32 GPKKALDKFLELAKRDGFTTE--NVDNYAGYAEYGQ--GEEYLGILGHLDVVPAGDGWTSPPFEAEIKDGRIYGRGTLDD 107 (447)
T ss_pred hHHHHHHHHHHHHHHcCceEE--EecCceEEEEeCC--CCCeEEEEeecCCCCCCCCCcCCCCceEEECCEEEECCcccC
Confidence 467899999999999999986 3456544432 22 35899999999999963 67799
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCC---CcHHHHHHHCC
Q 016853 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSG---VTVLDALRENS 139 (381)
Q Consensus 63 k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g---~~~~~~~~~~g 139 (381)
|++++++|.|+++|++.++ .++++|.++|++|||++ ..|++.++........ ....++ +.+. +.|
T Consensus 108 KG~laa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g-----~~g~~~~l~~~~~~~~-~~~~d~~~~~~~~----e~g 175 (447)
T TIGR01887 108 KGPTIAALYAMKILKELGL--KLKKKIRFIFGTDEETG-----WACIDYYFEHEEAPDI-GFTPDAEFPIIYG----EKG 175 (447)
T ss_pred cHHHHHHHHHHHHHHHcCC--CCCCcEEEEEECCcccC-----cHhHHHHHHhcCCCCE-EEeCCCCcceEEE----ecC
Confidence 9999999999999999987 78999999999999985 3577776532110000 000000 0000 000
Q ss_pred CChhhhhhhhcc-CCCccchheeeecccCCcccccCCCcceEEEeee-------------------cce-----EEEEEE
Q 016853 140 IDIAEESLLQLK-YDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIA-------------------GQT-----RLKVTV 194 (381)
Q Consensus 140 ~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-------------------g~~-----~~~i~v 194 (381)
.. . .++. ..++.. .+...++..|...+..+.+-..+.+.+ |.. +++|++
T Consensus 176 ~~---~--~~~~v~g~~~~-~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v 249 (447)
T TIGR01887 176 IV---T--LEISFKDDTEG-DVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGSFEVNDGTATITL 249 (447)
T ss_pred eE---E--EEEEeccCCCC-ceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceEEEecCCEEEEEE
Confidence 00 0 0000 000000 000001111211111111101222333 555 899999
Q ss_pred EecCCCCCCCCCCCCCCHHHHHHHHHHHHH--HHhcCCCCcc----c---cCCCCCCcccccCCCCeEEEEEEEEecCCC
Q 016853 195 RGSQGHAGTVPMSMRQDPMTAAAELIVLLE--RLCKHPKDFL----S---YDGRSNCSTLESLSSSLVCTVGEISSWPSA 265 (381)
Q Consensus 195 ~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~--~~~~~~~~~~----~---~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~ 265 (381)
+|+++|+|. | +.|.|||..+++++.++. +...+..+.+ . +.........++..+.+++|++.|++ +
T Consensus 250 ~G~~aHss~-p-~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~nvg~I~~-g-- 324 (447)
T TIGR01887 250 EGKSAHGSA-P-EKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMNVGVIDY-E-- 324 (447)
T ss_pred EeeecccCC-C-ccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEEEEEEEE-e--
Confidence 999999998 9 799999999999999986 2211100000 0 00000000012333567999999999 5
Q ss_pred CceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhhccC
Q 016853 266 SNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTG 343 (381)
Q Consensus 266 ~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~ 343 (381)
+|+.|++++|+|++|+++.+++++++.+.+. +. .++......+|. ..++++++.+.+++++++|..+
T Consensus 325 ---~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~- 393 (447)
T TIGR01887 325 ---NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTENGYLKPLYVPKDDPLVQTLMKVYEKQTGDEG- 393 (447)
T ss_pred ---CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEEccCCCCeEECCCCHHHHHHHHHHHHHhCCCC-
Confidence 3899999999999999999987777764322 21 222222222332 3567899999999999987642
Q ss_pred CCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 344 ATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 344 ~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
.....+|+||++++ |.++.|+|...
T Consensus 394 ------~~~~~~ggtda~~~----~~~i~~Gp~~p 418 (447)
T TIGR01887 394 ------TPVAIGGGTYARLM----ENGVAFGALFP 418 (447)
T ss_pred ------CeeEecchhhhhhC----CCcEEeCCCCC
Confidence 22234577998764 44667876633
No 62
>PRK08554 peptidase; Reviewed
Probab=99.96 E-value=1.1e-27 Score=236.72 Aligned_cols=300 Identities=17% Similarity=0.125 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcC---CCCEEEEecCCCCCCCeEEEeecccCCcCC---------------------CCC
Q 016853 5 SVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------GIF 60 (381)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~---~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------------g~~ 60 (381)
|.++++|+.++|+++||+++... ..|+++.+ |. +.++|+|+|||||||++ |+.
T Consensus 26 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~-~~--~~~~l~l~gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~~ 102 (438)
T PRK08554 26 SKECPKFIKDTLESWGIESELIEKDGYYAVYGEI-GE--GKPKLLFMAHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGSA 102 (438)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEe-CC--CCCEEEEEeccccCCCCccccccCCceeEEECCEEEECCcc
Confidence 68899999999999999986443 24788887 43 34799999999999964 667
Q ss_pred cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCC
Q 016853 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (381)
Q Consensus 61 D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~ 140 (381)
|||++++++|+|+++|++. .++++|.++|++|||+++ .++..+..++.. .+
T Consensus 103 DmKgg~aa~l~A~~~l~~~----~~~~~i~l~~~~dEE~g~-----~~~~~~~~~~~~-------------------~~- 153 (438)
T PRK08554 103 DDKGNVASVMLALKELSKE----PLNGKVIFAFTGDEEIGG-----AMAMHIAEKLRE-------------------EG- 153 (438)
T ss_pred cchHHHHHHHHHHHHHHhc----CCCCCEEEEEEcccccCc-----cccHHHHHHHHh-------------------cC-
Confidence 9999999999999999875 367899999999999853 234454322110 00
Q ss_pred ChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEE-------e--eecc---eEEEEEEEecC-CCCCCCCCC
Q 016853 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQ-------G--IAGQ---TRLKVTVRGSQ-GHAGTVPMS 207 (381)
Q Consensus 141 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g--~~g~---~~~~i~v~G~~-~Hs~~~p~~ 207 (381)
..++.+ +..|++..-.-.....|+.. . ..|. .++.++++|.+ +|+|. | .
T Consensus 154 -----------~~~~~~-----iv~Ept~~~~~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~-~-~ 215 (438)
T PRK08554 154 -----------KLPKYM-----INADGIGMKPIIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAY-F-L 215 (438)
T ss_pred -----------CCCCEE-----EEeCCCCCcchhhcCCceEEEEEecccccccccceeeeeeceeecccCcccccc-c-c
Confidence 011111 12222110000000001000 0 1222 35566667775 99987 6 3
Q ss_pred CCCC--HHHHHHHHHHHHHHHhcCCCCccccC-CCCCCcccccCCCCeEEEEEEEEecCC--------------------
Q 016853 208 MRQD--PMTAAAELIVLLERLCKHPKDFLSYD-GRSNCSTLESLSSSLVCTVGEISSWPS-------------------- 264 (381)
Q Consensus 208 ~g~N--Ai~~~~~~i~~l~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~ti~~~~i~g~g~-------------------- 264 (381)
.+.| ++..+++++.++..+.... .. .+. .... | ...++++..... |.
T Consensus 216 ~g~~~~~i~~~~~~~~~~~~~~~~~-~g-~~~~~~~~-----~--~~~~~~~~~p~~-g~n~~~~~~~~~~~~~l~~~~~ 285 (438)
T PRK08554 216 PGVDTHPLIAASHFLRESNVLAVSL-EG-KFLKGNVV-----P--GEVTLTYLEPGE-GEEVEVDLGLTRLLKAIVPLVR 285 (438)
T ss_pred CCcCchHHHHHHHHHhhcCceEEEE-ee-eeeecCcc-----c--ceeEEEEecCCC-CccccccccHHHHHHHHHHHHH
Confidence 5555 4777777776554321100 00 000 0000 1 122333322222 22
Q ss_pred ---------------CCcee---CCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEecc--CCCccCCH
Q 016853 265 ---------------ASNVI---PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHD--ANAVMCDA 324 (381)
Q Consensus 265 ---------------~~NvI---P~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~ 324 (381)
..|++ |++|++++|+|+.| .+.++++++|+++++.. ..+++++++.... .+.+..++
T Consensus 286 ~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~DiR~~~-~~~e~v~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 362 (438)
T PRK08554 286 APIKAEKYSDYGVSITPNVYSFAEGKHVLKLDIRAMS-YSKEDIERTLKEVLEFN--LPEAEVEIRTNEKAGYLFTPPDE 362 (438)
T ss_pred HhhccccccccceeeccceEEecCCeEEEEEEEEecC-CCHHHHHHHHHHHhhcc--CCCceEEEEeccCCCCcCCCCCh
Confidence 45666 89999999999988 68899999999888643 1355666654322 23345788
Q ss_pred HHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEee
Q 016853 325 DLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 325 ~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~~ 376 (381)
++++.+.+++++ +|.. +.....+|+||+++|+.. +|++. |.|.
T Consensus 363 ~lv~~~~~~~~~-~g~~-------~~~~~~~GgtDa~~~~~~Gip~v~-~Gp~ 406 (438)
T PRK08554 363 EIVKVALRVLKE-LGED-------AEPVEGPGASDSRYFTPYGVKAID-FGPK 406 (438)
T ss_pred HHHHHHHHHHHH-hCCC-------cEEEecCCchHHHHHHhcCCCceE-ECCC
Confidence 999999999988 5543 333456799999999876 99987 5554
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.92 E-value=9.6e-24 Score=195.10 Aligned_cols=290 Identities=21% Similarity=0.236 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCCC------C--------EEEEecCCCCCCCeEEEeecccCCcCC------------
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDHLG------N--------VHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~g------n--------v~a~~~g~~~~~~~i~l~~H~DtVp~~------------ 57 (381)
.-.++++|+.+.|+++|-+++..+.| + +++++ |+.|++++++++|||||+|++
T Consensus 40 ~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~~~-Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~L 118 (473)
T KOG2276|consen 40 EVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLGVL-GSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTL 118 (473)
T ss_pred HHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhhcc-cCCCCcceEEEEeeeeeeecCCCCCCcCCCeEE
Confidence 45689999999999999877654332 2 44444 877889999999999999974
Q ss_pred ----------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCC
Q 016853 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (381)
Q Consensus 58 ----------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~ 127 (381)
|+.|+||.+++.++|+++|++.|+ .++.+|.++|.+.||+ ||..+.+.+..+...
T Consensus 119 t~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~--~lpvnv~f~~EgmEEs--------gS~~L~~l~~~~kD~----- 183 (473)
T KOG2276|consen 119 TEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGI--DLPVNVVFVFEGMEES--------GSEGLDELIEKEKDK----- 183 (473)
T ss_pred EEECCEEeccCcCCCCccchHHHHHHHHHHHhCc--cccceEEEEEEechhc--------cCccHHHHHHHHhhh-----
Confidence 788999999999999999999998 9999999999999998 444443222221110
Q ss_pred CCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcce-EEEeeecceEEEEEEEe--cCCCCCCC
Q 016853 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLG-VVQGIAGQTRLKVTVRG--SQGHAGTV 204 (381)
Q Consensus 128 g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~g~~~~~i~v~G--~~~Hs~~~ 204 (381)
. .. +.|.++ +.+. -|.+...- +.+|.||...+.|+|.| +-.|||.+
T Consensus 184 -------~---~~------------~vD~vc------iSdn---yWlg~kkPcltyGlRG~~yf~i~v~g~~~DlHSGvf 232 (473)
T KOG2276|consen 184 -------F---FK------------DVDFVC------ISDN---YWLGTKKPCLTYGLRGVIYFQIEVEGPSKDLHSGVF 232 (473)
T ss_pred -------h---hc------------cCCEEE------eeCc---eeccCCCcccccccccceeEEEEEeecccccccccc
Confidence 0 00 112211 1111 13333221 44589999999999999 56799974
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcC-----CCCc---cc---------cC-------CCCC---Cccccc------CCCC
Q 016853 205 PMSMRQDPMTAAAELIVLLERLCKH-----PKDF---LS---------YD-------GRSN---CSTLES------LSSS 251 (381)
Q Consensus 205 p~~~g~NAi~~~~~~i~~l~~~~~~-----~~~~---~~---------~~-------~~~~---~~~~~p------~~~~ 251 (381)
- ..-+-|+..+..++..|.+...+ ..+. ++ ++ .... ....++ .+..
T Consensus 233 G-G~~hE~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWry 311 (473)
T KOG2276|consen 233 G-GVVHEAMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRY 311 (473)
T ss_pred c-chhHHHHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhccc
Confidence 3 34445777777777776544322 0000 00 00 0000 000000 0123
Q ss_pred eEEEEEEEE----ecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCc--eEEEEEeccCC--CccCC
Q 016853 252 LVCTVGEIS----SWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV--SCIVERKHDAN--AVMCD 323 (381)
Q Consensus 252 ~ti~~~~i~----g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~--~v~~~~~~~~~--~~~~~ 323 (381)
+++++..|. + +++..+||.++.-.+.||++|..+++.+.+.+.+.++..-++.+. ++++....... ..+.+
T Consensus 312 PSLsihgIeGaFs~-pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~~~~~Wv~d~~ 390 (473)
T KOG2276|consen 312 PSLSIHGIEGAFSG-PGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMGHAGAPWVSDPD 390 (473)
T ss_pred CccceecccceeeC-CCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeecCCCCceecCCC
Confidence 455554544 5 688999999999999999999999999999999998876554332 34444443333 34567
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q 016853 324 ADLSSQLKSASYAALKRMT 342 (381)
Q Consensus 324 ~~~~~~l~~a~~~~~g~~~ 342 (381)
++-..++.+|++.++|.+|
T Consensus 391 ~~~y~a~krA~~~v~gveP 409 (473)
T KOG2276|consen 391 DPHYLALKRAIETVYGVEP 409 (473)
T ss_pred chhHHHHHHHHHHhhCCCC
Confidence 7788999999999999875
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.82 E-value=1.2e-19 Score=174.40 Aligned_cols=287 Identities=19% Similarity=0.118 Sum_probs=221.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCCCC-------------EEEEecCCCCCCCeEEEeecccCCcCC-----------
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGN-------------VHGRVEGLNASAQALLIGSHLDTVVDA----------- 57 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~gn-------------v~a~~~g~~~~~~~i~l~~H~DtVp~~----------- 57 (381)
|+.|++++.|+.+|++.+|+.++ ++.+| +.+++++..+-.|.+-+.+||||+|..
T Consensus 21 S~~e~~~~p~~~~~~k~~~~~v~-dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~ 99 (414)
T COG2195 21 SKHEKAVAPSTVGQAKLLGLLVE-DELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILK 99 (414)
T ss_pred CCCccccccccHHHHHHcCchhh-hhhccccccccccCCCCeeeEEeeccccccccccccccccccccccccccCCceee
Confidence 78899999999999999999985 44322 555566654346788889999998520
Q ss_pred -------------------------------------C----CCcChHHHHHHHHHHHHHHhc--CCCCCCCCCEEEEEe
Q 016853 58 -------------------------------------G----IFDGSLGIITAISALKVLKST--GKLGKLKRPVEVIAF 94 (381)
Q Consensus 58 -------------------------------------g----~~D~k~giaa~l~a~~~l~~~--~~~~~~~~~i~~~~~ 94 (381)
| +.|+|+|++.++.++..+++. . .++++|.+.|+
T Consensus 100 ~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~~---i~h~~i~~g~s 176 (414)
T COG2195 100 ATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHPE---IPHGGIRGGFS 176 (414)
T ss_pred eccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCcc---ccccCeEEEec
Confidence 1 139999999999999999966 5 48899999999
Q ss_pred ccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccC
Q 016853 95 SDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWV 174 (381)
Q Consensus 95 ~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 174 (381)
++||.+ ..|++.+. +. ++ ++-++| .++
T Consensus 177 ~~Ee~g-----~rg~~~~~-----------------~a------------------~f--~a~~ay---~iD-------- 203 (414)
T COG2195 177 PDEEIG-----GRGAANKD-----------------VA------------------RF--LADFAY---TLD-------- 203 (414)
T ss_pred chHHhh-----hhhhhhcc-----------------HH------------------hh--hcceeE---ecC--------
Confidence 999985 25776552 00 11 111222 222
Q ss_pred CCcc-eEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeE
Q 016853 175 GFPL-GVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLV 253 (381)
Q Consensus 175 ~~~~-~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~t 253 (381)
+... .+..-..+...+++++.|+..|++..+ ...+||+..+.+++..+..... | ..++
T Consensus 204 Gg~~g~i~~ea~~~~~~~~~~~g~~~h~~~a~-~~~i~a~~~a~e~~~~~~~~~~------------------~--e~t~ 262 (414)
T COG2195 204 GGPVGEIPREAFNAAAVRATIVGPNVHPGSAK-GKMINALLLAAEFILELPLEEV------------------P--ELTE 262 (414)
T ss_pred CCccCeeeeeccchheeeeeeeccCcCccchH-HHHhhHHHhhhhhhhcCCcccc------------------c--cccc
Confidence 1111 244456788999999999999999867 7889999988888766553211 2 2567
Q ss_pred EEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcC--ceEEEEEeccCCCcc--CCHHHHHH
Q 016853 254 CTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS--VSCIVERKHDANAVM--CDADLSSQ 329 (381)
Q Consensus 254 i~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~--~~v~~~~~~~~~~~~--~~~~~~~~ 329 (381)
.+.|..+. ++..|.|.+++...+.+|.......+..+..+++.+++.++.++ ..++++....||.+. .++.++++
T Consensus 263 ~~~Gv~~~-~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~Yp~~~~~~~~~iv~~ 341 (414)
T COG2195 263 GPEGVYHL-GDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEMAASLGKLAGAELEVKDSYPGWKIKPDSPLVDL 341 (414)
T ss_pred ccceEEec-cccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHHHHHhhhccceEEEEeccccCcCCCCCchHHHH
Confidence 78888999 89999999999999999999999999999999999999988888 778888888888764 67789999
Q ss_pred HHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEe
Q 016853 330 LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCR 375 (381)
Q Consensus 330 l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~ 375 (381)
+.+++++++. ++...++.||||.+.++.. .|+..+|+|
T Consensus 342 a~~a~~~l~~--------~p~v~~i~gGtd~~~is~~g~p~~~i~~G 380 (414)
T COG2195 342 AKKAYKELGI--------KPKVKPIHGGTDGGVLSFKGLPTPNISTG 380 (414)
T ss_pred HHHHHHHhCC--------CceEEEeecccchhhhhccCCCCceEecc
Confidence 9999999854 3455567899999999888 899888888
No 65
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.72 E-value=7.5e-17 Score=129.11 Aligned_cols=110 Identities=28% Similarity=0.375 Sum_probs=93.7
Q ss_pred EeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEe
Q 016853 182 QGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISS 261 (381)
Q Consensus 182 ~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g 261 (381)
+|++|..+++|+++|+++|+|. | +.|.||+..+++++.+|+++..+... . ........++++++.+++
T Consensus 1 ~g~~G~~~~~i~~~G~~~H~s~-~-~~g~nai~~~~~~l~~l~~~~~~~~~--~--------~~~~~~~~~~~~~~~i~g 68 (111)
T PF07687_consen 1 IGHRGVIWFRITITGKSGHSSR-P-EKGVNAIEAAARFLNALEELEFEWAF--R--------PEEFFPGPPTLNIGSIEG 68 (111)
T ss_dssp EEEEEEEEEEEEEESBSEETTS-G-GGSBCHHHHHHHHHHHHHHTTCHBTS--T--------HHHCTCTSEEEEEEEEEE
T ss_pred CcCCCEEEEEEEEEeeccCCCC-c-cCccCHHHHHHHHHHHHHHhhccccc--c--------cccccccccceeEeeccc
Confidence 4689999999999999999995 9 79999999999999999987542100 0 000122578999999999
Q ss_pred cCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHH
Q 016853 262 WPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 304 (381)
Q Consensus 262 ~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~ 304 (381)
|...|+||++|++++++|++|.++.+++++.|++++++++.+
T Consensus 69 -G~~~n~ip~~a~~~~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 69 -GTAPNVIPDEATLTVDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp -ESSTTEESSEEEEEEEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcCCEECCEEEEEEEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 799999999999999999999999999999999999988764
No 66
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.57 E-value=2.1e-14 Score=135.11 Aligned_cols=103 Identities=26% Similarity=0.333 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcC-------------------C-CCEEEEecCCCCCCCeEEEeecccCCcC-----
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDH-------------------L-GNVHGRVEGLNASAQALLIGSHLDTVVD----- 56 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~-------------------~-gnv~a~~~g~~~~~~~i~l~~H~DtVp~----- 56 (381)
|+.|.++++||.++|+++|++++... . .||++.++|+. .+.|++.+|||||++
T Consensus 51 S~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~--~~~Ill~AH~DTV~p~~~~~ 128 (346)
T PRK10199 51 SPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKA--PQQIIIMAHLDTYAPQSDAD 128 (346)
T ss_pred CHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCC--CCeEEEEEEcCcCCCCCCCc
Confidence 78999999999999999999875321 1 35999998854 489999999999963
Q ss_pred ----------CCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhcc
Q 016853 57 ----------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (381)
Q Consensus 57 ----------~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~ 115 (381)
.|+.|||+|++++|+++++|++. .++++|.|+++++||.+ +.||++++..
T Consensus 129 ~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~----~~~~~I~fv~~~~EE~G-----l~GS~~~~~~ 188 (346)
T PRK10199 129 VDANLGGLTLQGMDDNAAGLGVMLELAERLKNV----PTEYGIRFVATSGEEEG-----KLGAENLLKR 188 (346)
T ss_pred cccCCCCcccCCccccHHHHHHHHHHHHHHhhC----CCCCcEEEEEECCcccC-----cHHHHHHHHh
Confidence 17889999999999999999865 46789999999999984 6899998743
No 67
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.51 E-value=2.3e-13 Score=127.89 Aligned_cols=181 Identities=21% Similarity=0.226 Sum_probs=128.0
Q ss_pred CHHHHHHHHHHHHHHHHcCC------EEEE-----cC--CCCEEEEecCCCCCCCeEEEeecccCCcC------------
Q 016853 2 SPASVRAGNLIRQWMEDAGL------RTWV-----DH--LGNVHGRVEGLNASAQALLIGSHLDTVVD------------ 56 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~------~~~~-----~~--~gnv~a~~~g~~~~~~~i~l~~H~DtVp~------------ 56 (381)
|+.|...+++|...|.++-+ +++. |. ..||+|.++|.. .+++|++.||+|||..
T Consensus 26 T~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~-~k~tvvl~gH~DtV~iedYg~lKd~Afd 104 (553)
T COG4187 26 TPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGT-SKRTVVLHGHFDTVSIEDYGELKDLAFD 104 (553)
T ss_pred CcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCC-CCceEEEeeccceeecccccchhhhccC
Confidence 56789999999999988764 1221 22 258999998854 4799999999999942
Q ss_pred -------------------------------CCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCC
Q 016853 57 -------------------------------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQST 105 (381)
Q Consensus 57 -------------------------------~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~ 105 (381)
.|..|||+|+|..|++++.+.+.. ..+|+|.|+.++|||..
T Consensus 105 p~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~~---~~~GNlLf~a~pdEE~~----- 176 (553)
T COG4187 105 PLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAART---DRQGNLLFMAVPDEEVE----- 176 (553)
T ss_pred HHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhCC---CCCCcEEEEeccchhhh-----
Confidence 177799999999999999998875 78999999999999984
Q ss_pred CcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeee
Q 016853 106 FLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIA 185 (381)
Q Consensus 106 ~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 185 (381)
..|.......|+. ..++.++. +..+++.++ ..+++ .....-.+++|..
T Consensus 177 s~G~r~a~~~L~~---------------L~kk~~l~----~~~~IN~D~---------~~~~~----dGd~~ryvYtGti 224 (553)
T COG4187 177 SRGMREARPALPG---------------LKKKFDLE----YTAAINLDV---------TSDQG----DGDQGRYVYTGTI 224 (553)
T ss_pred cccHHHHHHHHHH---------------HHHhhCce----EEEEecccc---------ccCCC----CCccceEEEeccc
Confidence 3677766533321 11111110 000001110 11111 1111223677888
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 016853 186 GQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLER 225 (381)
Q Consensus 186 g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~ 225 (381)
|..---.-|.|...|+|. |+ .|+||...+++++++|+-
T Consensus 225 GKLLp~f~vvG~etHvG~-~f-~Gvnan~maSei~~~le~ 262 (553)
T COG4187 225 GKLLPFFFVVGCETHVGY-PF-EGVNANFMASEITRRLEL 262 (553)
T ss_pred hhhcceeEEEeeccccCC-cc-cCCCHHHHHHHHHHHhhc
Confidence 888888999999999998 84 999999999999999863
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.29 E-value=2.3e-11 Score=116.01 Aligned_cols=97 Identities=20% Similarity=0.216 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcC------------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD------------------------ 56 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~------------------------ 56 (381)
+|+.|.++++||.++|+++|+++++|..||+++.++|.. ++|+|+|.||||+|.-
T Consensus 18 ~SG~E~~V~~~l~~~l~~~g~ev~~D~~Gnlia~~~g~~-~~~~v~l~aHmDevG~~V~~I~~~G~l~~~~iGG~~~~~l 96 (343)
T TIGR03106 18 PTGFTDAVVRYVAERLEDLGIEYELTRRGAIRATLPGRE-ATPARAVVTHLDTLGAMVRELKDNGRLELVPIGHWSARFA 96 (343)
T ss_pred CCCCHHHHHHHHHHHHHHcCCeEEECCCeEEEEEECCCC-CCCeEEEEEeeccccceeeEECCCCeEEEEecCCCcccce
Confidence 478999999999999999999999999999999987743 3589999999999730
Q ss_pred -----------C-------C------------------------------------------------------------
Q 016853 57 -----------A-------G------------------------------------------------------------ 58 (381)
Q Consensus 57 -----------~-------g------------------------------------------------------------ 58 (381)
+ |
T Consensus 97 ~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd~v~~~~~~~~~~~~~ 176 (343)
T TIGR03106 97 EGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGDFVAFDPQPEFLANGF 176 (343)
T ss_pred eCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCCEEEECCccEEecCCE
Confidence 0 0
Q ss_pred ----CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 59 ----IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 59 ----~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
++|||+||++++.++++|++.+. .++.+|.++|+++||.+
T Consensus 177 i~gr~~D~K~G~a~~l~~~~~l~~~~~--~~~~~v~~~~t~qEEvG 220 (343)
T TIGR03106 177 IVSRHLDDKAGVAALLAALKAIVEHKV--PLPVDVHPLFTITEEVG 220 (343)
T ss_pred EEEEecccHHhHHHHHHHHHHHHhcCC--CCCceEEEEEECCcccC
Confidence 12999999999999999998775 67899999999999986
No 69
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.18 E-value=1.6e-10 Score=109.30 Aligned_cols=107 Identities=24% Similarity=0.292 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCc----------------CC-------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp----------------~~------- 57 (381)
+|+.|.++.+|+.+.|+.++.++++|..||++++++|.+ +.|.|++.+|||+|= -|
T Consensus 17 psG~E~eVr~~~~~el~~~~~ev~~D~lGnlia~~~g~~-g~~~imi~AHmDEiG~mV~~I~~~G~Lr~~~IGG~~~~~~ 95 (355)
T COG1363 17 PSGYEEEVRDVLKEELEPLGDEVEVDRLGNLIAKKGGKN-GPPKVMIAAHMDEIGFMVKEIEDDGFLRFVPIGGWDPQVL 95 (355)
T ss_pred CCCcHHHHHHHHHHHHHHhCCceEEcCCCcEEEEecCCC-CCccEEEEeecceeeeeEEEECCCceEEEEEcCCcChhhc
Confidence 589999999999999999999999999999999998833 336699999999971 00
Q ss_pred --------------------------------------------------------------------------------
Q 016853 58 -------------------------------------------------------------------------------- 57 (381)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (381)
T Consensus 96 ~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v~~~~~~~~l~~~~i~ 175 (355)
T COG1363 96 EGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFVVFDPRFRELANGRVV 175 (355)
T ss_pred cCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEEEEcCceEEecCCcEE
Confidence
Q ss_pred -CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCC
Q 016853 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (381)
Q Consensus 58 -g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~ 117 (381)
=++|++.||+++|.+++.| + +. .++.++.+.|++-||.+ ..|++.....+.
T Consensus 176 skalDdR~gva~lle~lk~l-~-~~--~~~~~vy~v~tvqEEVG-----lrGA~~~a~~i~ 227 (355)
T COG1363 176 SKALDDRAGVAALLELLKEL-K-GI--ELPADVYFVASVQEEVG-----LRGAKTSAFRIK 227 (355)
T ss_pred eeeccchHhHHHHHHHHHHh-c-cC--CCCceEEEEEecchhhc-----cchhhccccccC
Confidence 1249999999999999999 4 54 78999999999999994 578877654333
No 70
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.13 E-value=3.3e-10 Score=108.20 Aligned_cols=109 Identities=20% Similarity=0.199 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcC----------------C-------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~----------------~------- 57 (381)
+|+.|.++++|+.++|++++.++++|+.||+++.+.|...++|+|+|.+|||+|+- |
T Consensus 13 pSG~E~~v~~~i~~~l~~~~~~v~~D~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~~~~vGG~~~~~l 92 (350)
T TIGR03107 13 TSGFEHPIRDYLRQDITPLVDQVETDGLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFRVVELGGWNPLVV 92 (350)
T ss_pred CCCCcHHHHHHHHHHHHhhCCEEEECCCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEEEEeCCCcccccc
Confidence 58999999999999999999999999999999998664123589999999999830 0
Q ss_pred --------------------------------------------------------------------------------
Q 016853 58 -------------------------------------------------------------------------------- 57 (381)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (381)
T Consensus 93 ~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~~~~~~~~~~~~i 172 (350)
T TIGR03107 93 SSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQTETILTANGKNV 172 (350)
T ss_pred CCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEECCCeEEEcCCCEE
Confidence
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCc
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV 118 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~ 118 (381)
-++|++.||++++.+++.|++. +++.++.++|++.||.+ ..|++.....+.+
T Consensus 173 ~~kalDdR~g~a~l~e~l~~l~~~----~~~~~l~~~~tvqEEvG-----~rGA~~aa~~i~p 226 (350)
T TIGR03107 173 ISKAWDNRYGVLMILELLESLKDQ----ELPNTLIAGANVQEEVG-----LRGAHVSTTKFNP 226 (350)
T ss_pred EEeccccHHHHHHHHHHHHHhhhc----CCCceEEEEEEChhhcC-----chhhhhHHhhCCC
Confidence 1239999999999999999876 46899999999999995 5788876543333
No 71
>PRK09961 exoaminopeptidase; Provisional
Probab=99.13 E-value=3.5e-10 Score=108.26 Aligned_cols=107 Identities=21% Similarity=0.257 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcC----------------C-------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~----------------~------- 57 (381)
+|+.|.+++++|.++|+++|+++++|..||+++++.|. ++|+|+|.+|||+|+- |
T Consensus 15 ~sG~E~~v~~~i~~~l~~~~~~v~~D~~Gnvi~~~~g~--~~~~v~l~aHmDevg~~V~~I~~~G~l~~~~vGG~~~~~~ 92 (344)
T PRK09961 15 IASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAAR 92 (344)
T ss_pred CCCChHHHHHHHHHHHHhhCCEEEECCCCCEEEEEcCC--CCCEEEEEeccceeceEEEEECCCceEEEEeCCCcccccc
Confidence 58899999999999999999999999999999988663 3479999999999841 0
Q ss_pred -----------C-----------------------------------------------------------CCcChHHHH
Q 016853 58 -----------G-----------------------------------------------------------IFDGSLGII 67 (381)
Q Consensus 58 -----------g-----------------------------------------------------------~~D~k~gia 67 (381)
| ++|++.||+
T Consensus 93 ~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~gkalDnR~g~~ 172 (344)
T PRK09961 93 QLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCY 172 (344)
T ss_pred CCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEEeechhhHhHH
Confidence 1 129999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCc
Q 016853 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV 118 (381)
Q Consensus 68 a~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~ 118 (381)
+++.+++.|++. +++.++.++|+..||.+ ..|++.....+.+
T Consensus 173 ~lle~l~~l~~~----~~~~~v~~~~tvqEEvG-----~rGa~~aa~~i~p 214 (344)
T PRK09961 173 LLVTLLRELHDA----ELPAEVWLVASSSEEVG-----LRGGQTATRAVSP 214 (344)
T ss_pred HHHHHHHHhhhc----CCCceEEEEEEcccccc-----hHHHHHHHhccCC
Confidence 999999999866 46899999999999984 5788876544443
No 72
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.05 E-value=4.5e-10 Score=98.27 Aligned_cols=62 Identities=34% Similarity=0.375 Sum_probs=52.7
Q ss_pred EEeecccCCcC--------------------CCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCC
Q 016853 46 LIGSHLDTVVD--------------------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQST 105 (381)
Q Consensus 46 ~l~~H~DtVp~--------------------~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~ 105 (381)
+|++||||||. .|..|||++++++|+|+++|++.+. .++++|.++|+++||.++
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~---- 74 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGD--DLPGNIIFLFTPDEEIGS---- 74 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTT--TCSSEEEEEEESTCCGTS----
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccc--cccccccccccccccCCC----
Confidence 68999999992 2778999999999999999998876 899999999999999974
Q ss_pred CcchHHHh
Q 016853 106 FLGSAALA 113 (381)
Q Consensus 106 ~~Gs~~l~ 113 (381)
..|++.++
T Consensus 75 ~~g~~~l~ 82 (189)
T PF01546_consen 75 IGGAKHLL 82 (189)
T ss_dssp TTHHHHHH
T ss_pred cchhhhhh
Confidence 23788765
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.02 E-value=2.8e-09 Score=101.74 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcC----------------C-------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~----------------~------- 57 (381)
+|+.|.++++++.++|+.++.++++|..||+++.. |. ++++|+|.+|||+|.- |
T Consensus 15 ~SG~E~~v~~~l~~~l~~~~dev~~D~~GNli~~~-g~--~~~kvml~AHmDevG~mV~~I~~~G~l~~~~lGG~~~~~l 91 (356)
T PRK09864 15 VSGDEQEVRDILINTLEPCVNEITFDGLGSFVARK-GN--KGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSM 91 (356)
T ss_pred CCCchHHHHHHHHHHHHHhCCEEEECCCCCEEEEe-CC--CCcEEEEEecccccCEEEEEECCCCeEEEEeCCCcCcccc
Confidence 58999999999999999999999999999999986 53 3479999999999730 0
Q ss_pred --------------------------------------------------------------------------------
Q 016853 58 -------------------------------------------------------------------------------- 57 (381)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (381)
T Consensus 92 ~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~~~~l~~~~i~~ 171 (356)
T PRK09864 92 LNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEANFACWGEDKVVG 171 (356)
T ss_pred CCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCCcEEEcCCEEEE
Confidence
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCC
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~ 117 (381)
=++|++.||++++.+++.|++ ++.++.++|++-||.+ ..|++.....+.
T Consensus 172 kalDnR~g~~~lle~l~~l~~------~~~~vy~v~TvQEEvG-----lrGA~~aa~~i~ 220 (356)
T PRK09864 172 KALDNRIGCAMMAELLQTVNN------PEITLYGVGSVEEEVG-----LRGAQTSAEHIK 220 (356)
T ss_pred EeCccHHHHHHHHHHHHHhhc------CCCeEEEEEEcchhcc-----hHHHHHHHhcCC
Confidence 112999999999999998863 5789999999999994 578887654333
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.44 E-value=6e-07 Score=92.35 Aligned_cols=110 Identities=25% Similarity=0.344 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHcCCEE-------EEc------------------CCCCEEEEecCCC-CCCCeEEEeecccCCcCC
Q 016853 4 ASVRAGNLIRQWMEDAGLRT-------WVD------------------HLGNVHGRVEGLN-ASAQALLIGSHLDTVVDA 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~-------~~~------------------~~gnv~a~~~g~~-~~~~~i~l~~H~DtVp~~ 57 (381)
+|..+.+|+.+++++..-.. +.| +..|++.++.++. +++-.|++++|+|+||.+
T Consensus 79 ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~~k~~~~~~~lLlnaHfDSvpt~ 158 (834)
T KOG2194|consen 79 NEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKISPKNGNDKNALLLNAHFDSVPTG 158 (834)
T ss_pred hHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecCCCCCCccceeeeeccccccCCC
Confidence 46688899998887653221 111 0137899986543 344599999999999987
Q ss_pred -CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhc--cCCccc
Q 016853 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG--ILPVSA 120 (381)
Q Consensus 58 -g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~--~l~~~~ 120 (381)
|+.|+-.+||++|+++|.+.+..- .+..+|+++|...||.. +.||..++. -+..++
T Consensus 159 ~gAtDDg~~va~mLe~lRv~s~~~~--~l~~~vVFLfNgaEE~~-----L~gsH~FItQH~w~~~~ 217 (834)
T KOG2194|consen 159 PGATDDGSGVASMLEALRVLSKSDK--LLTHSVVFLFNGAEESG-----LLGSHAFITQHPWSKNI 217 (834)
T ss_pred CCCCcchhHHHHHHHHHHHhhcCCC--cccccEEEEecCcccch-----hhhcccceecChhhhhh
Confidence 778999999999999999987753 57899999999999984 789998875 444443
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.34 E-value=8.5e-07 Score=77.02 Aligned_cols=63 Identities=32% Similarity=0.481 Sum_probs=53.1
Q ss_pred eEEEeecccCCc------C-CCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 44 ALLIGSHLDTVV------D-AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 44 ~i~l~~H~DtVp------~-~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
.|++.+|+|+++ . .|+.|+-.|++++|+.++.|++.+. .++++|.|+|+.+||. |+.||++++
T Consensus 2 ~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~--~~~~~i~fv~~~~EE~-----gl~GS~~~~ 71 (179)
T PF04389_consen 2 YIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKP--QPKRTIRFVFFDGEEQ-----GLLGSRAFV 71 (179)
T ss_dssp EEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTH--SSSEEEEEEEESSGGG-----TSHHHHHHH
T ss_pred EEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhc--ccCccEEEEEeccccc-----CccchHHHH
Confidence 689999999986 2 3888999999999999999999764 6788999999999998 478999987
No 76
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.06 E-value=9.6e-06 Score=75.88 Aligned_cols=46 Identities=24% Similarity=0.170 Sum_probs=39.3
Q ss_pred cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhcc
Q 016853 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (381)
Q Consensus 61 D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~ 115 (381)
|++.||++++.+++.|++.+ ++.++.++|++.||.+ ..|++.+...
T Consensus 134 DdR~g~~~lle~l~~l~~~~----~~~~v~~v~tvqEEvG-----~rGA~~aa~~ 179 (292)
T PF05343_consen 134 DDRAGCAVLLELLRELKEKE----LDVDVYFVFTVQEEVG-----LRGAKTAAFR 179 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTSS-----SSEEEEEEESSCTTT-----SHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHhhcC----CCceEEEEEEeeeeec-----Ccceeecccc
Confidence 89999999999999999875 4699999999999995 5788877543
No 77
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.66 E-value=0.00018 Score=64.92 Aligned_cols=113 Identities=19% Similarity=0.285 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCC-----------CCEEEEecCCCCCCCeEEEeecccCC--cCC---CCCcChHH
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHL-----------GNVHGRVEGLNASAQALLIGSHLDTV--VDA---GIFDGSLG 65 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~-----------gnv~a~~~g~~~~~~~i~l~~H~DtV--p~~---g~~D~k~g 65 (381)
|++-.++.+||.+.|+.+|+.++.+.. .|+++++.-.. .+-+++.+|||+- |++ |+.|-...
T Consensus 68 s~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A--~r~lVlachydsk~~p~~~~vgatdsAvp 145 (338)
T KOG3946|consen 68 SPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNA--SRYLVLACHYDSKIFPGGMFVGATDSAVP 145 (338)
T ss_pred CCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCc--chheeeecccccccCCCcceEeecccccc
Confidence 566788999999999999999887632 47999986543 4889999999994 333 67899999
Q ss_pred HHHHHHHHHHHHhcCC--CCCCCCCEEEEEeccccCCC-CC--CCCcchHHHhccC
Q 016853 66 IITAISALKVLKSTGK--LGKLKRPVEVIAFSDEEGVR-FQ--STFLGSAALAGIL 116 (381)
Q Consensus 66 iaa~l~a~~~l~~~~~--~~~~~~~i~~~~~~~EE~~~-~~--~~~~Gs~~l~~~l 116 (381)
||+++...++|.+.-+ ....+-.+.++|.-+||.-+ || -+..||++++..+
T Consensus 146 camll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA~~~ 201 (338)
T KOG3946|consen 146 CAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLAAKW 201 (338)
T ss_pred HHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHHHHH
Confidence 9999999998854311 12456789999999999732 44 3578999998653
No 78
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=97.15 E-value=0.0012 Score=65.71 Aligned_cols=65 Identities=34% Similarity=0.483 Sum_probs=57.3
Q ss_pred CCeEEEeecccCCcCC-CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhcc
Q 016853 42 AQALLIGSHLDTVVDA-GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (381)
Q Consensus 42 ~~~i~l~~H~DtVp~~-g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~ 115 (381)
.+.+++.+|+|++|.+ |+.|+-.|++++|++++.|+.. .++.+|.|++...||.+ +.||.++...
T Consensus 208 ~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~----~p~~~v~f~~~~aEE~G-----l~GS~~~~~~ 273 (435)
T COG2234 208 DSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGN----PPKRTVRFVAFGAEESG-----LLGSEAYVKR 273 (435)
T ss_pred CceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcC----CCCceEEEEEecchhhc-----ccccHHHHhc
Confidence 4788999999998874 8889999999999999999987 48899999999999984 6899998743
No 79
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=96.85 E-value=0.0039 Score=64.65 Aligned_cols=79 Identities=25% Similarity=0.400 Sum_probs=64.4
Q ss_pred CCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHH---HhcCCCCCCCCCEEEEEeccccCCCCC
Q 016853 27 HLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVL---KSTGKLGKLKRPVEVIAFSDEEGVRFQ 103 (381)
Q Consensus 27 ~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l---~~~~~~~~~~~~i~~~~~~~EE~~~~~ 103 (381)
..-|++++++|.....+-|++.+|-|..-.| +.|.-.|.+.++...+++ ++.|+ +|.++|.|+.+.+||-+
T Consensus 337 ki~NIig~I~Gs~epD~~ViigahrDSw~~G-a~dp~sGta~Ll~i~~~~~~~~k~gw--rP~RtI~F~sWdAeEfG--- 410 (702)
T KOG2195|consen 337 KIQNIIGKIEGSEEPDRYVIIGAHRDSWTFG-AIDPNSGTALLLEIARALSKLKKRGW--RPRRTILFASWDAEEFG--- 410 (702)
T ss_pred eeeeEEEEEecCcCCCeEEEEeccccccccC-CcCCCccHHHHHHHHHHHHHHHHcCC--CccceEEEEEccchhcc---
Confidence 4469999999964335899999999999877 778777776666666654 67889 99999999999999984
Q ss_pred CCCcchHHHh
Q 016853 104 STFLGSAALA 113 (381)
Q Consensus 104 ~~~~Gs~~l~ 113 (381)
+.||..++
T Consensus 411 --liGStE~~ 418 (702)
T KOG2195|consen 411 --LLGSTEWA 418 (702)
T ss_pred --ccccHHHH
Confidence 68998775
No 80
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=93.51 E-value=0.29 Score=44.27 Aligned_cols=65 Identities=18% Similarity=0.332 Sum_probs=52.6
Q ss_pred CeEEEeecccCCc--CC---CCCcChHHHHHHHHHHHHHHhc--CCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 43 QALLIGSHLDTVV--DA---GIFDGSLGIITAISALKVLKST--GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 43 ~~i~l~~H~DtVp--~~---g~~D~k~giaa~l~a~~~l~~~--~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
|.|++.+.||+.- ++ |+-+.-.|+++.|+|+++|.+. .. ..++++|.|.|..+|--+ ..||..++
T Consensus 1 ~iIlv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~-~~~~knV~F~~F~GEs~d-----YiGS~R~v 72 (234)
T PF05450_consen 1 PIILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDS-SNLNKNVLFAFFNGESFD-----YIGSSRFV 72 (234)
T ss_pred CEEEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhcc-ccccCcEEEEEecCcccc-----ccchHHHH
Confidence 5799999999963 22 6666779999999999999765 22 257899999999999975 58999886
No 81
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=90.21 E-value=3.2 Score=39.47 Aligned_cols=159 Identities=20% Similarity=0.190 Sum_probs=88.2
Q ss_pred CCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCC----CCcchHHHhccCC
Q 016853 42 AQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQS----TFLGSAALAGILP 117 (381)
Q Consensus 42 ~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~----~~~Gs~~l~~~l~ 117 (381)
...+++.+|.|+=..| ..|.-.|++++++++..|...+ ..+.++..+.||.++|+- =..||+.++...+
T Consensus 189 n~vv~i~AH~DHW~~G-~tDN~lg~~~AV~~~~~lr~~~------~~~~lv~FtAEE~g~p~~~sfyWa~GSr~~lk~~k 261 (486)
T COG4882 189 NGVVLIGAHLDHWYTG-FTDNILGVAQAVETAGRLRGRG------LAAGLVVFTAEEHGMPGMASFYWAAGSRGLLKESK 261 (486)
T ss_pred CCceEEeechhhhhhc-ccchhhhHHHHHHHHHHHhhcC------cceeEEEEeccccCCCCCcceeecccchHHHhhcC
Confidence 4799999999987654 6799999999999999998654 456677777888876551 1357776664333
Q ss_pred ccc--cc--cccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCc--ccccCCCcceEEEeeecceEEE
Q 016853 118 VSA--LR--VSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGP--VLEWVGFPLGVVQGIAGQTRLK 191 (381)
Q Consensus 118 ~~~--~~--~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~g~~~~~ 191 (381)
+.. .. +.|..|... ...+ +. | ..+++..+-|. +-.++..+.+++....|+-+++
T Consensus 262 ~~~~v~~~VN~Dv~g~~~--lv~~-~~-------------P----~L~e~~~~~g~~~vespe~y~Ds~~y~~aGiPS~T 321 (486)
T COG4882 262 AAEEVEAYVNFDVAGYRC--LVAS-GA-------------P----QLVEHALEAGAVEVESPEPYCDSIMYAWAGIPSLT 321 (486)
T ss_pred Cchhhhheeccccccccc--hhhh-cC-------------h----HHHHHHHHhCCceecCCCcccchhhhhhcCCCeeE
Confidence 211 11 122222100 0000 00 0 00000011111 0012333445665677888888
Q ss_pred EEEEecCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHhc
Q 016853 192 VTVRGSQGHAGT--VPMSMRQDPMTAAAELIVLLERLCK 228 (381)
Q Consensus 192 i~v~G~~~Hs~~--~p~~~g~NAi~~~~~~i~~l~~~~~ 228 (381)
|+--+-..|... .| ..-+|...-+..++..+.++..
T Consensus 322 i~SL~~~~~~e~yh~p-~Dtpa~~~n~~t~~d~a~r~v~ 359 (486)
T COG4882 322 IHSLWCPGVQEAYHTP-RDTPASWDNAWTAVDAAVRTVT 359 (486)
T ss_pred eeeccCCCccceecCC-CCCchhHHHHHHHHHHHHHHHh
Confidence 877665444331 14 3446777767677766666654
No 82
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=88.49 E-value=1 Score=45.38 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=40.6
Q ss_pred CCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHH
Q 016853 250 SSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQI 301 (381)
Q Consensus 250 ~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~ 301 (381)
..+|+|++.+++ + |+++.+.+++|++++++++++.+.++++++..
T Consensus 336 ~~~t~n~g~i~~-~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~ 380 (477)
T TIGR01893 336 VESSLNLGVVKT-K------ENKVIFTFLIRSSVESDKDYVTEKIESIAKLA 380 (477)
T ss_pred EEeeeeEEEEEE-c------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhhc
Confidence 367899999998 3 78999999999999999999999999998864
No 83
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=86.64 E-value=4.6 Score=39.37 Aligned_cols=98 Identities=18% Similarity=0.226 Sum_probs=61.0
Q ss_pred HHHHHHHHHcCCEEEEcC----------CCCEEEEec-CC-----CCCCCeEEEeecccCCcCC-----CCCcChHHHHH
Q 016853 10 NLIRQWMEDAGLRTWVDH----------LGNVHGRVE-GL-----NASAQALLIGSHLDTVVDA-----GIFDGSLGIIT 68 (381)
Q Consensus 10 ~~l~~~l~~~G~~~~~~~----------~gnv~a~~~-g~-----~~~~~~i~l~~H~DtVp~~-----g~~D~k~giaa 68 (381)
+.+..-+...|++...-. ..|+.+++. |. ++..|+|++.+||||.-.. |+--.-.|+.+
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvva 244 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVA 244 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHH
Confidence 345555666777754321 137888886 32 2357999999999996432 33223456778
Q ss_pred HHHHHHHHHhcC-C-CCCCCCCEEEEEeccccCCCCCCCCcchHHH
Q 016853 69 AISALKVLKSTG-K-LGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (381)
Q Consensus 69 ~l~a~~~l~~~~-~-~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l 112 (381)
.|+.++.+.+.- . .-..++++.|+.+.+--. .|+ |++.-
T Consensus 245 LLelarlfSkly~ypsTrakYnLlF~lt~aG~l-Nyq----GTkkW 285 (555)
T KOG2526|consen 245 LLELARLFSKLYDYPSTRAKYNLLFILTAAGKL-NYQ----GTKKW 285 (555)
T ss_pred HHHHHHHHHHHhcCcccccceeEEEEEccCccc-ccc----chhhh
Confidence 888888775431 0 013578999999887653 243 77643
No 84
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=84.63 E-value=7.3 Score=36.72 Aligned_cols=91 Identities=14% Similarity=0.116 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHcCCEEEEcC--------C--------C--C----EEEEecCCC-CCCCeEEEeecccCC--------
Q 016853 6 VRAGNLIRQWMEDAGLRTWVDH--------L--------G--N----VHGRVEGLN-ASAQALLIGSHLDTV-------- 54 (381)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~~--------~--------g--n----v~a~~~g~~-~~~~~i~l~~H~DtV-------- 54 (381)
...++++.+.+++.|+++++.. . | + ++.+|.|.. ...++|.|.|-==|.
T Consensus 18 ~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i~LVGKGiTFDtGG~~lK 97 (311)
T PF00883_consen 18 ETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPIALVGKGITFDTGGLSLK 97 (311)
T ss_dssp HHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEEEEEEEEEEEEE-TTSSS
T ss_pred HHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccEEEEcceEEEecCCccCC
Confidence 4578899999999999887532 1 1 1 667777665 456788887753222
Q ss_pred cCCCCCcC---hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 55 VDAGIFDG---SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 55 p~~g~~D~---k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
|..+-..| ++|-|+.+.+++++.+.+ ++.+|..++-..|=..
T Consensus 98 p~~~M~~Mk~DM~GAAaV~ga~~aia~lk----~~vnV~~~l~~~EN~i 142 (311)
T PF00883_consen 98 PSGGMEGMKYDMGGAAAVLGAMRAIAKLK----LPVNVVAVLPLAENMI 142 (311)
T ss_dssp CSTTGGGGGGGGHHHHHHHHHHHHHHHCT-----SSEEEEEEEEEEE--
T ss_pred CCcchhhcccCcchHHHHHHHHHHHHHcC----CCceEEEEEEcccccC
Confidence 22222334 378889999999999874 6799998888887653
No 85
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=79.87 E-value=22 Score=35.74 Aligned_cols=90 Identities=13% Similarity=0.112 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHcCCEEEEcC--------CCCEEEEecCCCCCCCeEEEeecccCCcC--------------CCCC---
Q 016853 6 VRAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGLNASAQALLIGSHLDTVVD--------------AGIF--- 60 (381)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~~--------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~--------------~g~~--- 60 (381)
...++++.+.+++.|+++++.+ ++.+++.=+|+. ..|.++...+-..-+. .|+.
T Consensus 174 ~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~-~~p~lv~l~Y~g~~~~~~~i~LVGKGiTFDsGG~slK 252 (468)
T cd00433 174 TYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSE-EPPRLIVLEYKGKGASKKPIALVGKGITFDTGGLSLK 252 (468)
T ss_pred HHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCC-CCCEEEEEEECCCCCCCCcEEEEcCceEecCCCcccc
Confidence 3467888888888999987543 233554433432 1244444444432210 1332
Q ss_pred ------cCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 61 ------DGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 61 ------D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
+|| +|-|+.+.+++++.+.+ ++.+|..++-..|=..
T Consensus 253 p~~~M~~Mk~DM~GAAaVlga~~aia~l~----~~vnV~~i~~~~EN~i 297 (468)
T cd00433 253 PAAGMDGMKYDMGGAAAVLGAMKAIAELK----LPVNVVGVLPLAENMI 297 (468)
T ss_pred CccChhhccccchhHHHHHHHHHHHHHcC----CCceEEEEEEeeecCC
Confidence 444 78889999999999884 7899999988888764
No 86
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=75.70 E-value=25 Score=35.78 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 64 ~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
+|-|+.|.+++++.+.+ ++.+|+.++-..|=..
T Consensus 324 gGAAaVlga~~AiA~Lk----lpvnVv~iiplaENm~ 356 (569)
T PTZ00412 324 MGAATVMCTLKAIAKLQ----LPVNVVAAVGLAENAI 356 (569)
T ss_pred hhHHHHHHHHHHHHHcC----CCeEEEEEEEhhhcCC
Confidence 67788999999998874 6899999988888764
No 87
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=75.07 E-value=31 Score=34.77 Aligned_cols=89 Identities=13% Similarity=0.087 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHcCCEEEEcC--------CCCEEEEecCCCCCCCeEEEeecccC----CcCC-------CC--------
Q 016853 7 RAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGLNASAQALLIGSHLDT----VVDA-------GI-------- 59 (381)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~--------~gnv~a~~~g~~~~~~~i~l~~H~Dt----Vp~~-------g~-------- 59 (381)
..++++.+.+++.|+++++.+ .+.+++.=+|+. ..|.++...+--. +-.| |+
T Consensus 192 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~-~~prli~l~Y~g~~~~i~LVGKGITFDsGG~slKp~~~ 270 (483)
T PRK00913 192 YLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSA-NPPRLIVLEYKGGKKPIALVGKGLTFDSGGISLKPAAG 270 (483)
T ss_pred HHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCC-CCCeEEEEEECCCCCeEEEEcCceEecCCCccCCCCcC
Confidence 467778888888899987532 234666644543 2355555554411 1111 23
Q ss_pred -CcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 60 -FDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 60 -~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
.+|| +|.|+.+.+++++.+.+ ++.+|..++-..|=..
T Consensus 271 M~~MK~DM~GAAaVlga~~aia~lk----l~vnV~~v~~l~ENm~ 311 (483)
T PRK00913 271 MDEMKYDMGGAAAVLGTMRALAELK----LPVNVVGVVAACENMP 311 (483)
T ss_pred hhhcccccHhHHHHHHHHHHHHHcC----CCceEEEEEEeeccCC
Confidence 2444 77889999999999874 7899999998888764
No 88
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=74.72 E-value=4.3 Score=39.15 Aligned_cols=92 Identities=10% Similarity=0.010 Sum_probs=54.7
Q ss_pred CCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCccCCHHHHHHHHHHHHHHHhhccCC
Q 016853 265 ASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGA 344 (381)
Q Consensus 265 ~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~ 344 (381)
+.+.++....+.+|+=...+..... . . . -.-|.-+ ...+. ....++.+.+.+.+++++. +
T Consensus 220 aa~~i~pD~aI~vDv~~~~d~~~~~--~-~-----~--lg~Gp~i--~~~D~--~~i~~~~l~~~l~~~A~~~-~----- 279 (350)
T TIGR03107 220 STTKFNPDIFFAVDCSPAGDIYGDQ--G-G-----K--LGEGTLL--RFFDP--GHIMLPRMKDFLLTTAEEA-G----- 279 (350)
T ss_pred HHhhCCCCEEEEEecCCcCCCCCCC--c-c-----c--cCCCceE--EEecC--CCCCCHHHHHHHHHHHHHc-C-----
Confidence 4555666678888876543221100 0 0 0 1113333 22222 3345888999999999885 1
Q ss_pred CCcccccccCcccHHHH--HHhhh-cCeEEEEEeeCC
Q 016853 345 TQHEIPVIMSGAGHDAM--AMSHL-TKVCSLLCRLNN 378 (381)
Q Consensus 345 ~~~~~~~~~~~g~tD~~--~~~~~-~p~~~~~~~~~~ 378 (381)
+++....++||||++ +++.. +|++.+.+|.+.
T Consensus 280 --I~~Q~~~~~gGtDa~~~~~~~~Gvpt~~i~ip~Ry 314 (350)
T TIGR03107 280 --IKYQYYVAKGGTDAGAAHLKNSGVPSTTIGVCARY 314 (350)
T ss_pred --CCcEEecCCCCchHHHHHHhCCCCcEEEEccCccc
Confidence 233334456789999 55555 999999999874
No 89
>PRK02256 putative aminopeptidase 1; Provisional
Probab=66.19 E-value=9.8 Score=38.12 Aligned_cols=38 Identities=21% Similarity=0.107 Sum_probs=31.1
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCC
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~ 101 (381)
...|+..++.+++.++..++ .++..+.++++..||.|.
T Consensus 257 ~rLDNr~~~~~~leal~~~~------~~~~~~~~~~~dqEEVGs 294 (462)
T PRK02256 257 YGQDDRVCAYTSLEALLELE------NPEKTAVVLLVDKEEIGS 294 (462)
T ss_pred cccccHHHHHHHHHHHHhcc------cCCCeEEEEEEcccccCC
Confidence 56899999999999977654 246789999999999853
No 90
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=62.80 E-value=49 Score=33.36 Aligned_cols=89 Identities=13% Similarity=0.014 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHcCCEEEEcC--------CCCEEEEecCCCCCCCeEEEeecccCCcC--------------CCCCc---
Q 016853 7 RAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGLNASAQALLIGSHLDTVVD--------------AGIFD--- 61 (381)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~--------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~--------------~g~~D--- 61 (381)
..++++.+++...|+.+++.. .+.+++.=++.. ..|.++...|.++=+. .|+.+
T Consensus 210 ~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~-~pP~ll~lsY~g~~~~~~~i~lvGKGvtfDsGGl~iK~ 288 (513)
T KOG2597|consen 210 QFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASC-EPPRLLELSYKGTSGADKTILLVGKGVTFDSGGLSIKP 288 (513)
T ss_pred HHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccC-CCCEEEEEEEcCCCCCcceEEEEecceEEecCcccccc
Confidence 568899999999998776432 122333322332 2356666666666332 13332
Q ss_pred ---------ChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 62 ---------GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 62 ---------~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
+++|-|+++.+++++.+.+ ++.++..++--.|-..
T Consensus 289 ~~~M~~mr~dm~GAA~v~~~~~a~~~l~----~~in~~~v~plcENm~ 332 (513)
T KOG2597|consen 289 KTGMDGMRRDMGGAAVVLGAFRAAAQLS----LPINVHAVLPLCENMP 332 (513)
T ss_pred CCChhhhhhhccccHHHHHHHHHHHhcC----CCCceEEEEeeeccCC
Confidence 2356778899999998875 5699999999898875
No 91
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=61.38 E-value=9.3 Score=32.57 Aligned_cols=38 Identities=24% Similarity=0.197 Sum_probs=28.5
Q ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhh
Q 016853 321 MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH 365 (381)
Q Consensus 321 ~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~ 365 (381)
.+++++++.+.+++++.++.. +....++++||+++++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~tD~~~~~~ 146 (189)
T PF01546_consen 109 DNDPPLVQALQAAAQEVGGEP-------PEPVASGGGTDAGFLAE 146 (189)
T ss_dssp CTCHHHHHHHHHHHHHTTSSE-------EEEEEESSSSTHHHHHC
T ss_pred cccHHHHHHHHHHHHHHhhcc-------ccccceeccccchhhhh
Confidence 367789999999999986521 22334568999999995
No 92
>PRK09961 exoaminopeptidase; Provisional
Probab=60.65 E-value=11 Score=36.21 Aligned_cols=50 Identities=10% Similarity=0.109 Sum_probs=36.1
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCccccc-ccCcccHHHHHHhh--h-cCeEEEEEeeC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPV-IMSGAGHDAMAMSH--L-TKVCSLLCRLN 377 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~-~~~~g~tD~~~~~~--~-~p~~~~~~~~~ 377 (381)
+..|+.+++.+.+++++.. ++... ...++|||++.+.. . +|++.+.+|.+
T Consensus 252 ~i~~~~l~~~l~~~A~~~~--------Ip~Q~~~~~ggGTDa~~~~~~~~Giptv~ig~p~r 305 (344)
T PRK09961 252 LIAPPKLTAWIETVAAEIG--------IPLQADMFSNGGTDGGAVHLTGTGVPTVVMGPATR 305 (344)
T ss_pred cCCCHHHHHHHHHHHHHcC--------CCcEEEecCCCcchHHHHHHhCCCCCEEEechhhh
Confidence 4468899999999998862 12222 23457899997654 4 99999988875
No 93
>PRK09864 putative peptidase; Provisional
Probab=56.82 E-value=19 Score=34.76 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=37.1
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh---cCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~---~p~~~~~~~~~~ 378 (381)
...++.+.+.+.+++++. + ++..... ..+|+||+..+... +|++.+-+|.|-
T Consensus 260 ~i~~~~l~~~l~~~A~~~-~-----Ip~Q~~~-~~~ggTDa~~i~~~~~Gvpt~~isiP~RY 314 (356)
T PRK09864 260 YFPNQKLVAALKSCAAHN-D-----LPLQFST-MKTGATDGGRYNVMGGGRPVVALCLPTRY 314 (356)
T ss_pred ccCCHHHHHHHHHHHHHc-C-----CCceEEE-cCCCCchHHHHHHhCCCCcEEEEeeccCc
Confidence 446888999999999885 1 2222222 34478999998653 999999999874
No 94
>PRK05015 aminopeptidase B; Provisional
Probab=56.56 E-value=1.2e+02 Score=29.99 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 64 ~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
+|-|+.+.+++++.+.+ ++.+|..++-..|=..
T Consensus 216 gGAAaV~ga~~~a~~~~----l~~nV~~il~~aENmi 248 (424)
T PRK05015 216 GGAATVTGALALAITRG----LNKRVKLFLCCAENLI 248 (424)
T ss_pred hHHHHHHHHHHHHHhcC----CCceEEEEEEecccCC
Confidence 67788899988887775 6889999988888764
No 95
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=54.98 E-value=33 Score=34.64 Aligned_cols=42 Identities=19% Similarity=0.205 Sum_probs=35.6
Q ss_pred eEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHH
Q 016853 252 LVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (381)
Q Consensus 252 ~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~ 300 (381)
+++|++.++.. -+.+.+.+++|+++..+.+++.++++++++.
T Consensus 344 ~S~Nlg~v~~~-------~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~ 385 (485)
T PRK15026 344 TSLNVGVVTMT-------DNNVEIHCLIRSLIDSGKDYVVSMLDSLGKL 385 (485)
T ss_pred eeeEEEEEEEe-------CCEEEEEEEecCCCchHHHHHHHHHHHHHHH
Confidence 67888888873 3689999999999999999999999887543
No 96
>TIGR03406 FeS_long_SufT probable FeS assembly SUF system protein SufT. The function is unknown for this protein family, but members are found almost always in operons for the the SUF system of iron-sulfur cluster biosynthesis. The SUF system is present elsewhere on the chromosome for those few species where SUF genes are not adjacent. This family shares this property of association with the SUF system with a related family, TIGR02945. TIGR02945 consists largely of a DUF59 domain (see Pfam family pfam01883), while this protein is about double the length, with a unique N-terminal domain and DUF59 C-terminal domain. A location immediately downstream of the cysteine desulfurase gene sufS in many contexts suggests the gene symbol sufT. Note that some other homologs of this family and of TIGR02945, but no actual members of this family, are found in operons associated with phenylacetic acid (or other ring-hydroxylating) degradation pathways.
Probab=53.09 E-value=1.2e+02 Score=25.96 Aligned_cols=29 Identities=10% Similarity=0.154 Sum_probs=20.2
Q ss_pred eEEEEEEeeCCChhHHHHHHHHHHHHHHH
Q 016853 272 EVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (381)
Q Consensus 272 ~a~~~~diR~~p~~~~~~~~~~i~~~~~~ 300 (381)
++.+.+.+-.+.-...+.+.+.+++.+..
T Consensus 114 ~V~I~mtLt~p~c~~~~~L~~dV~~aL~~ 142 (174)
T TIGR03406 114 RVDIEMTLTAPGCGMGPVLVEDVEDKVLA 142 (174)
T ss_pred EEEEEEEeCCCCCcHHHHHHHHHHHHHHh
Confidence 57777777666666667777778777754
No 97
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=51.59 E-value=24 Score=33.90 Aligned_cols=50 Identities=16% Similarity=0.106 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh---cCeEEEEEeeCC
Q 016853 322 CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKVCSLLCRLNN 378 (381)
Q Consensus 322 ~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~---~p~~~~~~~~~~ 378 (381)
.++.+.+.+.+++++. + ++..... ..+++||++.+... +|++.+.+|.|.
T Consensus 264 ~~~~l~~~l~~~A~~~-~-----Ip~Q~~~-~~~~gtDa~~~~~~~~Gi~t~~i~iP~Ry 316 (343)
T TIGR03106 264 FDYHLTRKLIRLCQDH-G-----IPHRRDV-FRYYRSDAASAVEAGHDIRTALVTFGLDA 316 (343)
T ss_pred CCHHHHHHHHHHHHHc-C-----CCcEEEe-cCCCCChHHHHHHcCCCCCEEEeeccccc
Confidence 4888999999999875 1 2222222 34578999987653 999999999874
No 98
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=51.03 E-value=16 Score=34.25 Aligned_cols=50 Identities=16% Similarity=0.157 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh---cCeEEEEEeeCC
Q 016853 322 CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKVCSLLCRLNN 378 (381)
Q Consensus 322 ~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~---~p~~~~~~~~~~ 378 (381)
.++.+.+.+.+++++. + ++.... ...+++||++.++.. +|++.+-+|.+.
T Consensus 221 ~~~~l~~~l~~~A~~~-~-----Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~ry 273 (292)
T PF05343_consen 221 PNPKLVDKLREIAEEN-G-----IPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCRY 273 (292)
T ss_dssp SHHHHHHHHHHHHHHT-T-------EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEBS
T ss_pred CCHHHHHHHHHHHHHc-C-----CCeEEE-ecCCcccHHHHHHHcCCCCCEEEEeccccc
Confidence 5778999999998875 1 222222 355789999998753 899999999885
No 99
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=50.59 E-value=1.1e+02 Score=30.90 Aligned_cols=33 Identities=18% Similarity=0.084 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 64 ~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
+|-|+.+.++.++.+.+ ++.+++.+.-..|=..
T Consensus 278 gGAAaV~g~~~a~a~l~----l~vnv~~vl~~~ENm~ 310 (485)
T COG0260 278 GGAAAVLGAMRALAELK----LPVNVVGVLPAVENMP 310 (485)
T ss_pred chHHHHHHHHHHHHHcC----CCceEEEEEeeeccCC
Confidence 67788999999999885 6889988888887754
No 100
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=42.70 E-value=79 Score=30.65 Aligned_cols=54 Identities=15% Similarity=0.117 Sum_probs=36.0
Q ss_pred ecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecc
Q 016853 35 VEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSD 96 (381)
Q Consensus 35 ~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~ 96 (381)
++|.. ...|+|.+|+.+=. -+.|.-+|++..+..++.|++.. ...+..|+|.+.
T Consensus 124 ipG~s--~~EillsthiCHPs--mANdnLSG~~v~~~La~~L~~~~----~rytYRflf~Pe 177 (386)
T PF09940_consen 124 IPGES--DEEILLSTHICHPS--MANDNLSGPAVLTFLAKWLKQLP----NRYTYRFLFVPE 177 (386)
T ss_dssp E--SS--S-EEEEEEE----S---TTTTHHHHHHHHHHHHHHTTS------SSEEEEEEE-T
T ss_pred ecCCC--CCeEEEEEeccCcc--cccccccHHHHHHHHHHHHhcCC----cCceEEEEEccc
Confidence 36763 58999999998744 46788999999999999998774 458888888874
No 101
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=40.51 E-value=59 Score=24.04 Aligned_cols=28 Identities=21% Similarity=0.342 Sum_probs=23.5
Q ss_pred eEEEEEEeeCCChhHHHHHHHHHHHHHH
Q 016853 272 EVTFTVDLRAIDDAGRETVLYELSNQLY 299 (381)
Q Consensus 272 ~a~~~~diR~~p~~~~~~~~~~i~~~~~ 299 (381)
.....+-||.+++....++.++|.+-++
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLk 35 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLE 35 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhC
Confidence 4556889999999999999999987664
No 102
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=37.79 E-value=1.2e+02 Score=30.83 Aligned_cols=64 Identities=13% Similarity=0.189 Sum_probs=47.8
Q ss_pred CEEEEecC-CCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccC
Q 016853 30 NVHGRVEG-LNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (381)
Q Consensus 30 nv~a~~~g-~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~ 99 (381)
|+++.+.. ++++...+++..-++..-. ..+ ..|++..|+.++++++... ...||.++++.+|..
T Consensus 5 nvy~i~rapR~d~tEaivl~~~~~~~~~--~~n-~~~v~l~lal~~~~~~~~~---wsKDii~l~~~~~~~ 69 (504)
T PF04114_consen 5 NVYGILRAPRGDGTEAIVLVVPWRDSDG--EYN-AGGVALALALARYFRRQSY---WSKDIIFLFTDDELA 69 (504)
T ss_pred EEEEEEecCCCCCceeEEEEEecCCCCc--ccc-hhhHHHHHHHHHHhhhchh---hhccEEEEecCCcch
Confidence 78888753 2345679999887765432 222 7889999999999998874 789999999876554
No 103
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=36.34 E-value=48 Score=31.98 Aligned_cols=50 Identities=16% Similarity=0.075 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh---cCeEEEEEeeCC
Q 016853 322 CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL---TKVCSLLCRLNN 378 (381)
Q Consensus 322 ~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~---~p~~~~~~~~~~ 378 (381)
.++.+.+.|.+++++. .+++.... ..+|+||++.+... +|+..+.+|.+.
T Consensus 267 ~~~~l~~~L~~~A~~~------~Ip~Q~~v-~~~ggTDA~a~~~~g~gvpta~Igip~ry 319 (355)
T COG1363 267 YHPKLRKFLLELAEKN------NIPYQVDV-SPGGGTDAGAAHLTGGGVPTALIGIPTRY 319 (355)
T ss_pred CCHHHHHHHHHHHHHc------CCCeEEEe-cCCCCccHHHHHHcCCCCceEEEeccccc
Confidence 3788999999999885 12222223 23489999998664 999999999874
No 104
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=33.83 E-value=2.1e+02 Score=29.42 Aligned_cols=81 Identities=12% Similarity=0.098 Sum_probs=54.3
Q ss_pred HHHHHHHHHHcCCEEEEcCC----------CCEEEEecCC-CCCCCeEEEeecccCCcCCCCCc-ChHHHHHHHHHHHHH
Q 016853 9 GNLIRQWMEDAGLRTWVDHL----------GNVHGRVEGL-NASAQALLIGSHLDTVVDAGIFD-GSLGIITAISALKVL 76 (381)
Q Consensus 9 ~~~l~~~l~~~G~~~~~~~~----------gnv~a~~~g~-~~~~~~i~l~~H~DtVp~~g~~D-~k~giaa~l~a~~~l 76 (381)
..|++.++++.|.++...+. .|+++.+.+- +.+...+++. ||=+-..+ +-.+++-+++-++.+
T Consensus 91 ~~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl~-----vP~~~~~~~~~~~v~l~lsla~~f 165 (617)
T KOG3566|consen 91 NAWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVLV-----VPYGRSSGSNSASVALLLSLADYF 165 (617)
T ss_pred hhHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEEE-----EecccCCCcchhHHHHHHHHHHHh
Confidence 35688889999999876554 3899988542 3356788885 55331111 155666666666666
Q ss_pred HhcCCCCCCCCCEEEEEeccc
Q 016853 77 KSTGKLGKLKRPVEVIAFSDE 97 (381)
Q Consensus 77 ~~~~~~~~~~~~i~~~~~~~E 97 (381)
++.. -...+|+++++-++
T Consensus 166 ~r~~---yWsKDII~v~~d~~ 183 (617)
T KOG3566|consen 166 SRWV---YWSKDIIFVFTDGP 183 (617)
T ss_pred cCCe---eecccEEEEEeCCc
Confidence 6655 47899999998773
No 105
>PF03755 YicC_N: YicC-like family, N-terminal region ; InterPro: IPR013527 Proteins in this entry are homologues of YicC (P23839 from SWISSPROT) from Escherichia coli. Although it is relatively poorly characterised YicC has been shown to be important for cells in the stationary phase, and essential for growth at high temperatures []. This domain is found at the N-terminal region of these proteins.
Probab=33.56 E-value=2.3e+02 Score=23.78 Aligned_cols=65 Identities=9% Similarity=0.108 Sum_probs=41.8
Q ss_pred EEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEe--c-cCCCccCCHHHHHHHHHHHHHHHhh
Q 016853 274 TFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK--H-DANAVMCDADLSSQLKSASYAALKR 340 (381)
Q Consensus 274 ~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~--~-~~~~~~~~~~~~~~l~~a~~~~~g~ 340 (381)
.+.+.+|+|.. ...++..|++.+++...+-.+++.+... . .......|.++++...++++.+...
T Consensus 30 ~Ldi~~rlP~~--l~~lE~~ir~~i~~~l~RGkV~v~i~~~~~~~~~~~~~in~~l~~~y~~~l~~l~~~ 97 (159)
T PF03755_consen 30 FLDISIRLPRE--LSSLEPEIRKLIRKKLSRGKVEVSIRVERSSESAVELRINEELAKAYYEALKELAEE 97 (159)
T ss_pred ceeeEEeCCHH--HHHHHHHHHHHHHHhcccceEEEEEEEEECcccCCCcccCHHHHHHHHHHHHHHHHH
Confidence 46777777755 4677778888887655443345444433 3 2344556888888888888876544
No 106
>PF09650 PHA_gran_rgn: Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn); InterPro: IPR013433 Proteins in this entry are encoded by genes involved in either polyhydroxyalkanoic acid (PHA) biosynthesis or utilisation, including proteins at found at the surface of PHA granules. These proteins have so far been predominantly found in the Pseudomonadales, Xanthomonadales, and Vibrionales, all of which belong to the Gammaproteobacteria.
Probab=32.76 E-value=87 Score=23.47 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=28.7
Q ss_pred EeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEE
Q 016853 278 DLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVE 312 (381)
Q Consensus 278 diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~ 312 (381)
+|+-+.....+++.+.+++.+.++..+|+++++++
T Consensus 2 ~I~r~H~Lg~~eAr~~~~~~~~~l~~~~~~~~~W~ 36 (87)
T PF09650_consen 2 HIERPHSLGREEARRRAEELAEKLAEEYGVECTWE 36 (87)
T ss_pred eEEecCCCCHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 45666777889999999999999999998776554
No 107
>PRK06156 hypothetical protein; Provisional
Probab=32.07 E-value=2.2e+02 Score=29.04 Aligned_cols=25 Identities=16% Similarity=0.202 Sum_probs=20.8
Q ss_pred EEEEEEEEecCCCCceeCCeEEEEEE
Q 016853 253 VCTVGEISSWPSASNVIPGEVTFTVD 278 (381)
Q Consensus 253 ti~~~~i~g~g~~~NvIP~~a~~~~d 278 (381)
+.++..++| |...|+||+.|.+.+.
T Consensus 240 ~~~l~~~~g-G~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTG-GAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEc-CCcCCCCCCccEEEEe
Confidence 456788899 8999999999998833
No 108
>cd04870 ACT_PSP_1 CT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). The ACT_PSP_1 CD includes the first of the two ACT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). PSPs belong to the L-2-haloacid dehalogenase-like protein superfamily. PSP is involved in serine metabolism; serine is synthesized from phosphoglycerate through sequential reactions catalyzed by 3-phosphoglycerate dehydrogenase (SerA), 3-phosphoserine aminotransferase (SerC), and SerB. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=31.32 E-value=1.9e+02 Score=20.45 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=26.9
Q ss_pred CeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEE
Q 016853 271 GEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIV 311 (381)
Q Consensus 271 ~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~ 311 (381)
+...+.+.++.++..+.+.+++.+++.++ +.++++.+
T Consensus 37 ~~f~~~~~v~~p~~~~~~~l~~~l~~l~~----~l~l~i~~ 73 (75)
T cd04870 37 GRLSLGILVQIPDSADSEALLKDLLFKAH----ELGLQVRF 73 (75)
T ss_pred CeeEEEEEEEcCCCCCHHHHHHHHHHHHH----HcCceEEE
Confidence 56778888888877778888887777654 45666665
No 109
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=30.97 E-value=2.5e+02 Score=23.36 Aligned_cols=33 Identities=12% Similarity=0.067 Sum_probs=21.6
Q ss_pred eeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHH
Q 016853 268 VIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (381)
Q Consensus 268 vIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~ 300 (381)
+..+.+.+.+.+=++--...+.+.+.+++.++.
T Consensus 22 v~gd~V~VtIt~Ty~gcpa~e~L~~~I~~aL~~ 54 (146)
T TIGR02159 22 VDGGGVVVKFTPTYSGCPALEVIRQDIRDAVRA 54 (146)
T ss_pred EECCEEEEEEEeCCCCCchHHHHHHHHHHHHHh
Confidence 344667777777666555666777777777754
No 110
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=30.55 E-value=61 Score=32.61 Aligned_cols=51 Identities=16% Similarity=0.087 Sum_probs=33.2
Q ss_pred CCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEE-eccccCCCCCCCCcchHHHhc
Q 016853 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIA-FSDEEGVRFQSTFLGSAALAG 114 (381)
Q Consensus 57 ~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~-~~~EE~~~~~~~~~Gs~~l~~ 114 (381)
+...|+..++.++|.|+..++...- ..+..+.+++ +..||.|. .|+.....
T Consensus 247 s~rlDnr~~~~~~l~al~~~~~~~~--~~~~~~~v~~~~d~EEVGs-----~ga~GA~s 298 (465)
T PTZ00371 247 SPRLDNLGSSFCAFKALTEAVESLG--ENSSNIRMVCLFDHEEVGS-----SSSQGAGS 298 (465)
T ss_pred EecchhHHHHHHHHHHHHhcccccc--CCCCceEEEEEECCcCCCC-----Ccchhccc
Confidence 3678999999999999877653200 1234455544 99999853 55555543
No 111
>PF05411 Peptidase_C32: Equine arteritis virus putative proteinase; InterPro: IPR008742 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases corresponds to MEROPS peptidase family C32 (clan CA). The type example is equine arteritis virus-type cysteine proteinase (porcine reproductive and respiratory syndrome virus), which is involved in viral polyprotein processing [].; GO: 0003968 RNA-directed RNA polymerase activity, 0004197 cysteine-type endopeptidase activity, 0004252 serine-type endopeptidase activity, 0005524 ATP binding, 0008270 zinc ion binding, 0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; PDB: 3MTV_A.
Probab=29.63 E-value=1e+02 Score=24.80 Aligned_cols=48 Identities=17% Similarity=0.242 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCEEEEcCCCCEEEEecC------------CCCCCCeEEEeecccCCcCC
Q 016853 10 NLIRQWMEDAGLRTWVDHLGNVHGRVEG------------LNASAQALLIGSHLDTVVDA 57 (381)
Q Consensus 10 ~~l~~~l~~~G~~~~~~~~gnv~a~~~g------------~~~~~~~i~l~~H~DtVp~~ 57 (381)
.||..+|+-.|+...+|..|.+++..-. ..|..|.....+-+|+||-.
T Consensus 49 kYLqrRLqv~GLraV~d~~G~~~v~af~~~~SwirHv~l~~ep~~pgfv~l~r~~Vvpn~ 108 (127)
T PF05411_consen 49 KYLQRRLQVNGLRAVVDPYGPIHVYAFSCPESWIRHVSLADEPVPPGFVRLGRIRVVPNT 108 (127)
T ss_dssp HHHHHHHHTTTEEEEE-TT-SEEEEEESSTT-S-EEEEETTS---TTEEEEEEEEEEESS
T ss_pred HHHHHHHHhcCeeEEECCCCCEEEEEecCCccceeeeEecCCCCCCCcEEEEEEEEEeCC
Confidence 6999999999999888888876664322 11235667777777777743
No 112
>TIGR02701 shell_carb_anhy carboxysome shell carbonic anhydrase. This model describes a carboxysome shell protein that proves to be a novel class, designated epsilon, of carbonic anhydrase. It tends to be encoded near genes for RuBisCo and for other carboxysome shell proteins.
Probab=29.04 E-value=46 Score=32.38 Aligned_cols=51 Identities=29% Similarity=0.241 Sum_probs=37.7
Q ss_pred CCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 42 AQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 42 ~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
-+.+.+.+|+|||.+| +.|+-.|| +.++..++.-.+|.+|.+-|--+--..
T Consensus 361 lRNL~YfahLdTVEEG-A~DlDVGI-------kIF~~LNv~~gLPIPvvvrf~Y~~~VP 411 (450)
T TIGR02701 361 LRNLAYFAHLDTVEEG-APDVDVGI-------KIFTGLNVSRGLPIPVAVHFRYDGRVP 411 (450)
T ss_pred echhhHHhhhhhhcCC-CCCCccch-------hhhhcCCCcCCCCccEEEEEecCCCCC
Confidence 5688999999999875 77888776 334444443358899999998886654
No 113
>TIGR03350 type_VI_ompA type VI secretion system OmpA/MotB family protein. The flagellar motor protein MotB and the Gram-negative bacterial outer membrane protein OmpA share a region of sequence homology. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology.
Probab=25.89 E-value=1.9e+02 Score=23.39 Aligned_cols=53 Identities=23% Similarity=0.162 Sum_probs=37.8
Q ss_pred CeEEEeecccCCcCC-CCC--cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccc
Q 016853 43 QALLIGSHLDTVVDA-GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (381)
Q Consensus 43 ~~i~l~~H~DtVp~~-g~~--D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE 98 (381)
..|.+.||.|..+.. +.+ ....+..=+.++..+|.+.|+ ++..|.+...++.+
T Consensus 61 ~~i~I~GhTD~~~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi---~~~ri~~~g~G~~~ 116 (137)
T TIGR03350 61 GRITVVGHTDNVPIRTSRFPSNWHLSEARAKAVADVLAQGGV---PAGRVRAEGRGDSE 116 (137)
T ss_pred CeEEEEEecCCCCCccCCcccHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECCCC
Confidence 589999999999853 222 456777778888889999886 45667665444433
No 114
>cd04871 ACT_PSP_2 ACT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). The ACT_PSP_2 CD includes the second of the two ACT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). PSPs belong to the L-2-haloacid dehalogenase-like protein superfamily. PSP is involved in serine metabolism; serine is synthesized from phosphoglycerate through sequential reactions catalyzed by 3-phosphoglycerate dehydrogenase (SerA), 3-phosphoserine aminotransferase (SerC), and SerB. Members of this CD belong to the superfamily of ACT regulatory domains
Probab=25.44 E-value=1.6e+02 Score=21.73 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=27.0
Q ss_pred CCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEE
Q 016853 270 PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVE 312 (381)
Q Consensus 270 P~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~ 312 (381)
|....+.+++|..+ .+.+.+++.+.+. +.+.|+++.++
T Consensus 46 ~~~~~~e~~v~~~~-~~~~~lr~~L~~l----a~elgvDIavQ 83 (84)
T cd04871 46 SPKACVEFSVRGQP-ADLEALRAALLEL----ASELNVDIAFQ 83 (84)
T ss_pred CCcEEEEEEEeCCC-CCHHHHHHHHHHH----hcccCceEEEe
Confidence 45668999999766 6888887777654 45567777654
No 115
>PRK02813 putative aminopeptidase 2; Provisional
Probab=24.70 E-value=1.8e+02 Score=28.97 Aligned_cols=52 Identities=27% Similarity=0.373 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcC-------CC----------CEEEEecCCCC--CCCeEEEeecccCC
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDH-------LG----------NVHGRVEGLNA--SAQALLIGSHLDTV 54 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~-------~g----------nv~a~~~g~~~--~~~~i~l~~H~DtV 54 (381)
|+-+..+.+++.+.|++.||.- .++ .| .++|-.-|..+ +..-.++.+|.|..
T Consensus 18 s~t~~hav~~~~~~L~~~Gf~~-l~e~~~w~l~~g~kyy~~r~~~sliAf~vg~~~~~~~g~~iv~aH~DsP 88 (428)
T PRK02813 18 SPSPFHAVANVAQRLEAAGFTE-LDETDAWKLEPGGRYYVVRNGSSLIAFRVGEGAPAETGFRIVGAHTDSP 88 (428)
T ss_pred CCCHHHHHHHHHHHHHHcCCee-ccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCeEEEEEeccCC
Confidence 4567889999999999999962 221 11 25555545432 12367999999985
No 116
>TIGR02610 PHA_gran_rgn putative polyhydroxyalkanoic acid system protein. All members of this family are encoded by genes polyhydroxyalkanoic acid (PHA) biosynthesis and utilization genes, including proteins at found at the surface of PHA granules. Examples so far are found in the Pseudomonales, Xanthomonadales, and Vibrionales, all of which belong to the Gammaproteobacteria.
Probab=22.97 E-value=1.9e+02 Score=21.94 Aligned_cols=36 Identities=3% Similarity=0.080 Sum_probs=29.0
Q ss_pred EEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEE
Q 016853 276 TVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIV 311 (381)
Q Consensus 276 ~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~ 311 (381)
.+.|+.+..-..+++.+.++++++++..+|+++.++
T Consensus 3 ~I~I~r~H~Lg~~eAr~~~e~~a~~l~~~~~~e~~W 38 (91)
T TIGR02610 3 SISVERDHSLGPAAARAKAEDLARKLTDRYGLASHW 38 (91)
T ss_pred ceEEEecCCCCHHHHHHHHHHHHHHHHHHhCCEeEE
Confidence 356777788888999999999999888888865544
No 117
>PRK06667 motB flagellar motor protein MotB; Validated
Probab=22.60 E-value=3e+02 Score=25.08 Aligned_cols=54 Identities=20% Similarity=0.257 Sum_probs=39.3
Q ss_pred CeEEEeecccCCcCC--CCC--cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccc
Q 016853 43 QALLIGSHLDTVVDA--GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (381)
Q Consensus 43 ~~i~l~~H~DtVp~~--g~~--D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE 98 (381)
..|.+.||.|..|.. +.+ +-..+..=+.++.++|.+.|+ .++..|.+...++..
T Consensus 160 ~~i~I~GhTD~~~~~~~~~~~~N~~LS~~RA~aV~~~L~~~g~--~~~~ri~~~G~G~~~ 217 (252)
T PRK06667 160 RNFRIEGHTDNVDVNPEGPWKSNWELSGARAVNMLEYILNYGD--QSESWFQVSGFAGSR 217 (252)
T ss_pred ceEEEEEeCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHcCC--CCcceEEEEEECCCC
Confidence 579999999999854 333 334666677888899998886 447778777666544
No 118
>cd04869 ACT_GcvR_2 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. This CD includes the second of the two ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. The glycine cleavage enzyme system in Escherichia coli provides one-carbon units for cellular methylation reactions. This enzyme system, encoded by the gcvTHP operon and lpd gene, catalyzes the cleavage of glycine into CO2 + NH3 and transfers a one-carbon unit to tetrahydrofolate, producing 5,10-methylenetetrahydrofolate. The gcvTHP operon is activated by the GcvA protein in response to glycine and repressed by a GcvA/GcvR interaction in the absence of glycine. It has been proposed that the co-activator glycine acts through a mechanism of de-repression by binding to GcvR and preventing GcvR from interacting with GcvA to block GcvA's activator function. Evidence also suggests that GcvR in
Probab=22.52 E-value=2.5e+02 Score=19.88 Aligned_cols=38 Identities=11% Similarity=-0.027 Sum_probs=26.1
Q ss_pred CCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEE
Q 016853 270 PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIV 311 (381)
Q Consensus 270 P~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~ 311 (381)
++...+.+.+..++..+.+++++.+++.++ ++++++.+
T Consensus 42 ~~~~~~~~~v~~p~~~~~~~l~~~l~~l~~----~~~~~~~~ 79 (81)
T cd04869 42 TPLFKAQATLALPAGTDLDALREELEELCD----DLNVDISL 79 (81)
T ss_pred cceEEEEEEEecCCCCCHHHHHHHHHHHHH----HhcceEEe
Confidence 367777888888776677877777776554 45666554
No 119
>PRK02813 putative aminopeptidase 2; Provisional
Probab=22.38 E-value=89 Score=31.08 Aligned_cols=37 Identities=22% Similarity=0.171 Sum_probs=29.8
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCC
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~ 101 (381)
.+.|+..++.++|.|+..++ . +..+.++++..||.|.
T Consensus 231 ~~lDnr~~~~~~l~al~~~~------~-~~~~~~~~~d~EEVGs 267 (428)
T PRK02813 231 GRLDNLSSCHAGLEALLAAA------S-DATNVLAAFDHEEVGS 267 (428)
T ss_pred ecchhHHHHHHHHHHHHhcC------C-CCeEEEEEEecCccCC
Confidence 67899999998888866543 3 6789999999999853
No 120
>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA. NoxA is essential for growth control of the fungal endophyte in plant tissue in the process of symbiotic interaction between a fungi and its plant host. The Epichloe festucae p67(phox)-like regulator, NoxR, dispensable in culture but essential in plants for the symbiotic interaction. Plants infected with a noxR deletion mutant show severe stunting and premature senescence, whereas hyphae in the meristematic tissues show increased branching leading to increased fungal colonization of pseudostem and leaf blade tissue. The PB1 domain is a modular domain mediating specific protein-protein interactions which a play role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is
Probab=22.37 E-value=3.4e+02 Score=20.39 Aligned_cols=54 Identities=13% Similarity=0.045 Sum_probs=34.2
Q ss_pred EEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEecc--CCCccCCHHHHHHHHHHHH
Q 016853 277 VDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHD--ANAVMCDADLSSQLKSASY 335 (381)
Q Consensus 277 ~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~l~~a~~ 335 (381)
..+|.+|....+++.++|++.+.- .-.+.+.|.+. ...+..++++-.++..|-+
T Consensus 14 ~~i~v~~~i~f~dL~~kIrdkf~~-----~~~~~iKykDEGD~iti~sq~DLd~Ai~~a~~ 69 (86)
T cd06408 14 RYIMIGPDTGFADFEDKIRDKFGF-----KRRLKIKMKDDGDMITMGDQDDLDMAIDTARS 69 (86)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhCC-----CCceEEEEEcCCCCccccCHHHHHHHHHHHHH
Confidence 457888999999999999887742 12344454433 3334466676666665544
No 121
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=20.75 E-value=1.6e+02 Score=21.60 Aligned_cols=32 Identities=34% Similarity=0.320 Sum_probs=27.3
Q ss_pred eEEEEEEeeCCChhHHHHHHHHHHHHHHHHHH
Q 016853 272 EVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303 (381)
Q Consensus 272 ~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~ 303 (381)
.|++++-+|.+++.....+.+.|.+.++..+.
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~l~~~ 35 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALPQQAQ 35 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhcCChh
Confidence 57899999999999999999999888765443
No 122
>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only]
Probab=20.67 E-value=3.4e+02 Score=25.78 Aligned_cols=74 Identities=22% Similarity=0.197 Sum_probs=47.7
Q ss_pred HHHHcCCEEEEcC---CCC-EEEEe--cCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcCCCCCCCCC
Q 016853 15 WMEDAGLRTWVDH---LGN-VHGRV--EGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRP 88 (381)
Q Consensus 15 ~l~~~G~~~~~~~---~gn-v~a~~--~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~ 88 (381)
.|++-.++|.+|. .|+ .++.+ +|+ ....|++.+|+=+-. =+.|.-+|+|......++|+.. +...+
T Consensus 147 kl~dgdyeVvIDae~~dG~L~ygefi~rg~--~~~eiLlst~lCHPS--maNdn~SG~all~~lak~l~~~----ktrys 218 (435)
T COG4310 147 KLEDGDYEVVIDAEHEDGSLDYGEFIHRGT--SKDEILLSTYLCHPS--MANDNLSGLALLTFLAKALKSL----KTRYS 218 (435)
T ss_pred HhhcCCeEEEEecccccCceehhheeccCC--ccceeeeeecccChh--hccCccchHHHHHHHHHHHHhc----cceee
Confidence 4555567776663 244 34443 365 358999999974322 2457778888777778888865 45667
Q ss_pred EEEEEecc
Q 016853 89 VEVIAFSD 96 (381)
Q Consensus 89 i~~~~~~~ 96 (381)
..|+|.+.
T Consensus 219 YRfvf~P~ 226 (435)
T COG4310 219 YRFVFAPE 226 (435)
T ss_pred EEEEeccc
Confidence 77776653
No 123
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=20.01 E-value=5.2e+02 Score=23.65 Aligned_cols=66 Identities=26% Similarity=0.237 Sum_probs=44.7
Q ss_pred EEEEecCCC-----CCCCeEEEeecccCCc---C--CCCCcChHHHHHHHHHHHHH--HhcCCCCCCCCCEEEEEecccc
Q 016853 31 VHGRVEGLN-----ASAQALLIGSHLDTVV---D--AGIFDGSLGIITAISALKVL--KSTGKLGKLKRPVEVIAFSDEE 98 (381)
Q Consensus 31 v~a~~~g~~-----~~~~~i~l~~H~DtVp---~--~g~~D~k~giaa~l~a~~~l--~~~~~~~~~~~~i~~~~~~~EE 98 (381)
+-..++|++ .+.|++-+.|-+--+- . |=..|.-|++++.-.|+|.+ ++.|. .+++++.+.--.+--
T Consensus 15 vki~ipG~~Gk~~Gg~aptlGIiGRLGgigARP~~iGlVSDaDGAi~ala~a~KL~~M~~kGd--~L~GDVii~ThIcp~ 92 (276)
T PF06675_consen 15 VKILIPGSNGKSSGGSAPTLGIIGRLGGIGARPERIGLVSDADGAIAALAAALKLLDMQAKGD--VLPGDVIITTHICPD 92 (276)
T ss_pred EEEEecCccCccCCCCCCeeEEEeecccccccccceeeeecCchHHHHHHHHHHHHHHHHcCC--ccCCcEEEEEecCCC
Confidence 455566632 3578999988776653 2 23458888888888887755 66775 899999887655543
Done!