Query 016853
Match_columns 381
No_of_seqs 119 out of 1505
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 04:52:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016853.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016853hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n5f_A L-carbamoylase, N-carba 100.0 6.3E-51 2.1E-55 399.1 36.7 347 1-378 30-376 (408)
2 1z2l_A Allantoate amidohydrola 100.0 1.4E-47 4.8E-52 377.1 32.7 346 1-378 34-380 (423)
3 2v8h_A Beta-alanine synthase; 100.0 1.3E-47 4.4E-52 382.3 32.8 341 2-378 66-416 (474)
4 3ram_A HMRA protein; two-domai 100.0 1.3E-41 4.6E-46 331.2 27.2 297 1-379 31-336 (394)
5 1ysj_A Protein YXEP; M20 famil 100.0 4.8E-41 1.6E-45 328.6 29.7 303 1-378 47-369 (404)
6 3gb0_A Peptidase T; NP_980509. 100.0 5.1E-41 1.7E-45 324.9 27.7 292 1-376 21-342 (373)
7 3rza_A Tripeptidase; phosphory 100.0 1.5E-40 5.3E-45 324.2 27.6 292 1-377 39-363 (396)
8 1xmb_A IAA-amino acid hydrolas 100.0 5E-40 1.7E-44 322.7 28.0 302 1-377 43-366 (418)
9 3pfo_A Putative acetylornithin 100.0 5.3E-40 1.8E-44 324.0 24.8 300 1-376 41-397 (433)
10 3io1_A Aminobenzoyl-glutamate 100.0 5.9E-39 2E-43 317.4 30.8 301 1-377 29-400 (445)
11 3ife_A Peptidase T; metallopep 100.0 8.1E-40 2.8E-44 322.7 20.7 289 2-376 53-401 (434)
12 1vgy_A Succinyl-diaminopimelat 100.0 2.4E-38 8.1E-43 308.4 30.0 299 1-376 21-347 (393)
13 3isz_A Succinyl-diaminopimelat 100.0 7.8E-38 2.7E-42 302.7 31.1 301 1-377 18-345 (377)
14 1cg2_A Carboxypeptidase G2; me 100.0 3.2E-38 1.1E-42 307.4 27.0 288 5-375 41-357 (393)
15 3tx8_A Succinyl-diaminopimelat 100.0 5.5E-38 1.9E-42 303.2 22.0 294 1-377 28-340 (369)
16 3dlj_A Beta-Ala-His dipeptidas 100.0 8.5E-36 2.9E-40 298.0 30.6 317 4-378 51-450 (485)
17 2rb7_A Peptidase, M20/M25/M40 100.0 1.2E-36 4.3E-41 293.2 20.3 275 3-376 26-327 (364)
18 2f7v_A Aectylcitrulline deacet 100.0 2.5E-36 8.4E-41 291.7 19.8 277 4-375 32-336 (369)
19 2zog_A Cytosolic non-specific 100.0 1.5E-35 5.2E-40 295.8 25.6 314 4-375 44-442 (479)
20 3ct9_A Acetylornithine deacety 100.0 6.8E-36 2.3E-40 287.3 21.3 276 1-376 26-323 (356)
21 2pok_A Peptidase, M20/M25/M40 100.0 1.8E-35 6.1E-40 295.4 24.1 312 5-376 66-448 (481)
22 1fno_A Peptidase T; metallo pe 100.0 2.6E-35 8.8E-40 289.1 24.4 284 3-373 29-372 (417)
23 3pfe_A Succinyl-diaminopimelat 100.0 8.3E-35 2.8E-39 289.8 23.0 308 4-377 46-436 (472)
24 2qyv_A XAA-His dipeptidase; YP 100.0 1.6E-33 5.4E-38 281.7 28.8 289 1-375 26-453 (487)
25 3mru_A Aminoacyl-histidine dip 100.0 1.5E-33 5.2E-38 281.6 24.5 301 1-378 29-458 (490)
26 3khx_A Putative dipeptidase sa 100.0 4.8E-33 1.7E-37 278.2 23.6 329 4-376 64-457 (492)
27 1lfw_A PEPV; hydrolase, dipept 100.0 5.6E-31 1.9E-35 262.1 21.0 315 4-377 44-431 (470)
28 3t68_A Succinyl-diaminopimelat 99.8 1.3E-18 4.3E-23 160.3 17.0 104 1-113 21-149 (268)
29 1q7l_A Aminoacylase-1; catalys 99.8 8.4E-18 2.9E-22 147.7 13.3 104 4-113 30-159 (198)
30 4h2k_A Succinyl-diaminopimelat 99.7 1.4E-16 4.6E-21 146.7 11.9 104 1-113 21-149 (269)
31 1tkj_A Aminopeptidase, SGAP; d 99.7 1.6E-16 5.4E-21 147.4 10.5 105 2-114 31-143 (284)
32 1rtq_A Bacterial leucyl aminop 99.6 1.2E-15 4E-20 142.6 9.5 105 2-113 39-162 (299)
33 3tc8_A Leucine aminopeptidase; 99.6 5.7E-15 1.9E-19 138.2 12.7 107 2-114 44-184 (309)
34 3gux_A Putative Zn-dependent e 99.6 5.1E-15 1.7E-19 138.6 11.8 107 2-114 46-187 (314)
35 2afw_A Glutaminyl-peptide cycl 99.6 8.3E-15 2.8E-19 138.6 11.2 109 2-114 49-189 (329)
36 2wzn_A TET3, 354AA long hypoth 99.5 9.8E-19 3.4E-23 164.7 -19.7 94 1-100 24-130 (354)
37 2fvg_A Endoglucanase; TM1049, 99.5 1.1E-14 3.7E-19 138.6 6.3 101 1-113 13-208 (340)
38 2gre_A Deblocking aminopeptida 99.5 2.1E-14 7E-19 137.1 7.5 102 2-111 22-229 (349)
39 1vhe_A Aminopeptidase/glucanas 99.5 8.5E-14 2.9E-18 134.0 10.6 103 1-113 22-227 (373)
40 2wyr_A Cobalt-activated peptid 99.5 6E-14 2.1E-18 132.9 8.0 100 1-113 17-216 (332)
41 3pb6_X Glutaminyl-peptide cycl 99.4 3.7E-13 1.3E-17 126.6 10.5 107 2-114 57-193 (330)
42 1y0y_A FRV operon protein FRVX 99.4 9.2E-13 3.2E-17 125.8 8.2 99 1-113 21-223 (353)
43 4fuu_A Leucine aminopeptidase; 99.3 8E-12 2.7E-16 117.0 12.8 93 2-100 44-162 (309)
44 4f9u_A CG32412; alpha/beta hyd 99.3 6.6E-12 2.3E-16 117.8 11.0 109 2-114 28-162 (312)
45 3kl9_A PEPA, glutamyl aminopep 99.3 1.1E-11 3.9E-16 117.8 8.9 104 1-113 18-225 (355)
46 1vho_A Endoglucanase; structur 99.2 1.7E-11 6E-16 116.6 9.7 101 1-112 20-214 (346)
47 1ylo_A Hypothetical protein SF 99.2 1.8E-11 6.2E-16 116.5 9.6 101 1-112 18-211 (348)
48 4fai_A CG5976, isoform B; alph 99.2 3E-11 1E-15 114.1 10.8 109 2-114 55-186 (330)
49 2ek8_A Aminopeptidase; metallo 99.2 4.4E-11 1.5E-15 116.8 9.8 99 8-115 173-285 (421)
50 3cpx_A Aminopeptidase, M42 fam 99.1 3.8E-11 1.3E-15 113.0 4.0 93 1-112 32-201 (321)
51 2vpu_A TET3, 354AA long hypoth 99.0 3.2E-10 1.1E-14 107.7 7.2 52 1-55 24-76 (354)
52 3iib_A Peptidase M28; YP_92679 99.0 3.6E-10 1.2E-14 111.0 7.7 79 29-114 236-315 (444)
53 3isx_A Endoglucanase; TM1050, 98.9 2.9E-09 9.8E-14 100.5 9.7 51 1-54 26-76 (343)
54 3fed_A Glutamate carboxypeptid 98.7 2.8E-08 9.5E-13 102.1 8.0 79 28-114 312-393 (707)
55 3kas_A Transferrin receptor pr 98.5 9.7E-08 3.3E-12 97.1 7.7 80 28-115 266-349 (640)
56 3k9t_A Putative peptidase; str 95.9 0.019 6.6E-07 54.6 7.9 62 35-113 174-235 (435)
57 1q7l_B Aminoacylase-1; catalys 95.0 0.014 4.9E-07 43.0 2.9 44 325-377 2-46 (88)
58 2ijz_A Probable M18-family ami 90.7 0.12 4E-06 49.9 2.8 53 2-54 15-85 (428)
59 1y7e_A Probable M18-family ami 88.3 0.27 9.2E-06 47.8 3.4 52 2-54 32-99 (458)
60 1ylo_A Hypothetical protein SF 87.7 0.6 2E-05 43.4 5.3 94 266-378 212-309 (348)
61 2glf_A Probable M18-family ami 83.9 1.5 5E-05 42.4 6.0 53 2-54 30-96 (450)
62 1vho_A Endoglucanase; structur 82.9 0.76 2.6E-05 42.6 3.5 89 265-378 214-307 (346)
63 3kl9_A PEPA, glutamyl aminopep 81.9 1.3 4.3E-05 41.5 4.5 52 319-378 263-317 (355)
64 1vhe_A Aminopeptidase/glucanas 81.9 1.6 5.3E-05 41.1 5.2 52 319-378 270-325 (373)
65 4h2k_A Succinyl-diaminopimelat 81.6 0.9 3.1E-05 40.6 3.3 46 323-375 190-236 (269)
66 3kzw_A Cytosol aminopeptidase; 80.9 6.8 0.00023 38.1 9.3 90 7-100 218-340 (515)
67 4efd_A Aminopeptidase; structu 79.7 10 0.00034 36.9 9.9 90 7-100 225-347 (522)
68 1y0y_A FRV operon protein FRVX 78.8 1.9 6.5E-05 40.1 4.7 51 320-378 267-321 (353)
69 3h8g_F Cytosol aminopeptidase; 78.7 10 0.00036 36.8 9.8 90 7-100 201-324 (497)
70 3isx_A Endoglucanase; TM1050, 78.2 1.8 6.1E-05 40.3 4.2 51 320-378 263-317 (343)
71 2wyr_A Cobalt-activated peptid 76.2 1.5 5.1E-05 40.3 3.1 52 319-378 254-305 (332)
72 3pei_A Cytosol aminopeptidase; 76.0 11 0.00036 36.6 9.0 90 7-100 185-308 (486)
73 1gyt_A Cytosol aminopeptidase; 75.3 14 0.00048 36.0 9.7 90 7-100 202-327 (503)
74 1lam_A Leucine aminopeptidase; 72.7 19 0.00064 34.9 9.8 90 7-100 182-307 (484)
75 2vpu_A TET3, 354AA long hypoth 72.6 3.5 0.00012 38.5 4.6 51 320-378 265-320 (354)
76 2glj_A Probable M18-family ami 71.0 1 3.5E-05 43.7 0.6 49 5-54 37-105 (461)
77 3mru_A Aminoacyl-histidine dip 70.2 8.4 0.00029 37.5 7.0 49 251-306 347-395 (490)
78 2gre_A Deblocking aminopeptida 68.8 3.7 0.00013 38.0 3.9 49 322-378 267-319 (349)
79 3jru_B Probable cytosol aminop 67.6 25 0.00085 34.1 9.4 89 7-100 197-319 (490)
80 2hc9_A Leucine aminopeptidase 65.9 62 0.0021 31.3 11.8 89 7-100 188-309 (491)
81 3cpx_A Aminopeptidase, M42 fam 65.4 2.8 9.7E-05 38.4 2.3 83 268-378 208-294 (321)
82 2jvf_A De novo protein M7; tet 56.0 14 0.00049 25.3 3.9 31 271-301 15-45 (96)
83 3kr4_A M17 leucyl aminopeptida 55.1 53 0.0018 32.0 9.2 91 7-100 226-351 (528)
84 3ij3_A Cytosol aminopeptidase; 50.9 90 0.0031 30.0 9.9 88 7-100 188-307 (482)
85 2fvg_A Endoglucanase; TM1049, 47.0 17 0.00058 33.3 4.3 48 322-377 254-305 (340)
86 2glj_A Probable M18-family ami 42.0 12 0.0004 36.2 2.4 38 58-101 258-295 (461)
87 2zvy_A Chemotaxis protein MOTB 36.8 77 0.0026 26.1 6.4 52 44-98 92-148 (183)
88 2ek8_A Aminopeptidase; metallo 34.6 26 0.0009 33.1 3.6 27 2-28 34-60 (421)
89 3iib_A Peptidase M28; YP_92679 32.8 31 0.0011 33.0 3.8 26 2-27 41-67 (444)
90 1y7e_A Probable M18-family ami 32.3 8.8 0.0003 37.1 -0.2 38 58-100 252-289 (458)
91 2ijz_A Probable M18-family ami 30.8 17 0.00057 34.8 1.4 49 58-118 232-280 (428)
92 3vat_A Dnpep, aspartyl aminope 29.9 20 0.00068 34.9 1.8 43 58-101 282-326 (496)
93 2glf_A Probable M18-family ami 29.1 29 0.001 33.3 2.8 37 58-101 246-282 (450)
94 3cyp_B Chemotaxis protein MOTB 27.6 1.1E+02 0.0038 23.7 5.7 53 43-98 37-92 (138)
95 2zov_A Chemotaxis protein MOTB 27.6 1.1E+02 0.0039 25.8 6.0 52 44-98 103-159 (210)
96 2qyv_A XAA-His dipeptidase; YP 25.6 1.5E+02 0.005 28.3 7.2 46 250-302 344-389 (487)
97 3khn_A MOTB protein, putative; 25.1 1.4E+02 0.0048 24.1 6.0 53 43-98 83-139 (174)
98 3s0y_A Motility protein B; pep 21.8 1.7E+02 0.0057 24.1 6.0 52 44-98 93-147 (193)
99 3s06_A Motility protein B; pep 20.7 1.4E+02 0.0047 23.9 5.1 52 44-98 66-120 (166)
No 1
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=6.3e-51 Score=399.12 Aligned_cols=347 Identities=36% Similarity=0.638 Sum_probs=300.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~ 80 (381)
+|++|.++++||.++|+++|++++.+..+|++++++|+.+++|+|+|.+|||+||.+|.+|+|+|++++|.+++.|++.+
T Consensus 30 ~s~~e~~~~~~l~~~l~~~g~~~~~d~~gnv~a~~~g~~~~~~~i~l~aH~D~v~~~g~~d~~~g~a~~l~~~~~l~~~~ 109 (408)
T 3n5f_A 30 FTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHG 109 (408)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCEEEECTTCCEEEEECCSSTTSCEEEEEEESCCCTTBCSSTTHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEcCCCCEEEEecCCCCCCCEEEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 37999999999999999999999999999999999887544699999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchhe
Q 016853 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGY 160 (381)
Q Consensus 81 ~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~ 160 (381)
. .++++|.++|+++||.++||.|+.|++.+.+.+.++.+.+.|.+|+.+.+.+.+.|++++. +.....++..+.++
T Consensus 110 ~--~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~--~~~~~~~~~~~~~~ 185 (408)
T 3n5f_A 110 V--VTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDR--LPQAARKPGTVKAY 185 (408)
T ss_dssp C--CCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGG--GGGGCCCTTTEEEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhh--hhhcccCccCccEE
Confidence 6 7899999999999998878878999999998777766666688999999999998886541 11111223356678
Q ss_pred eeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCC
Q 016853 161 IEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRS 240 (381)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~ 240 (381)
+++|+++|++++..+.+.+++.+.+|..+++|+++|+++|++..|++.++||+..+++++.+|+.+..+
T Consensus 186 ~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~~~----------- 254 (408)
T 3n5f_A 186 VELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----------- 254 (408)
T ss_dssp EEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHHHH-----------
T ss_pred EEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHHHh-----------
Confidence 889999999888777788888999999999999999999995448448999999999999999987631
Q ss_pred CCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCc
Q 016853 241 NCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV 320 (381)
Q Consensus 241 ~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~ 320 (381)
. .+++++++.|++++.+.|+||++|++.+++|+.+.++.++++++|+++++.++..+++++++++...+|++
T Consensus 255 -------~-~~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~~~~p~~ 326 (408)
T 3n5f_A 255 -------T-GTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERLQEMPPV 326 (408)
T ss_dssp -------H-SSCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEECCE
T ss_pred -------c-CCcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCc
Confidence 1 15799999999944999999999999999999999999999999999999988889999999888888988
Q ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 321 MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 321 ~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
.+|+++++.+.+++++. |.+ +...+++|+||+++|++.+|++++|+|+.+
T Consensus 327 ~~d~~l~~~~~~a~~~~-g~~-------~~~~~~~ggtD~~~~~~~iP~~~~~~~~~~ 376 (408)
T 3n5f_A 327 LCSDEVKRAAEAACQKL-GYP-------SFWLPSGAAHDSVQLAPICPIGMIFVRSQD 376 (408)
T ss_dssp ECCHHHHHHHHHHHHHH-TCC-------CCEEEESSCCTTTTTTTTSCEEEEEECCGG
T ss_pred CCCHHHHHHHHHHHHHc-CCC-------cccCCCcCchHHHHHHHHCCEEEEEeCCCC
Confidence 89999999999999987 643 223345688999999988999999999864
No 2
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=1.4e-47 Score=377.06 Aligned_cols=346 Identities=32% Similarity=0.488 Sum_probs=287.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~ 80 (381)
+|++|.++++||.++|+++|++++++..+|++++++|.+++.|+|+|.+||||||.+|.+|||++++++|.|+++|++.+
T Consensus 34 ~s~~e~~~~~~i~~~l~~~G~~v~~~~~gnv~a~~~g~~~~~~~i~l~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~~ 113 (423)
T 1z2l_A 34 YSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQY 113 (423)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCEEEECTTSCEEEEECCSSEEEEEEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEecCCcEEEEEcCCCCCCCEEEEEEecCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999988889999999876433489999999999999999999999999999999999988
Q ss_pred CCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCcc-ccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchh
Q 016853 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVS-ALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (381)
Q Consensus 81 ~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~-~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~ 159 (381)
. .++++|.++|+++||.++||.++.|++.+..++... .+...|.+|+.+.+.+.+.|+... .......+.+.+
T Consensus 114 ~--~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~----~~~p~~~~~~~~ 187 (423)
T 1z2l_A 114 G--APLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLP----NAPLTPRQDIKA 187 (423)
T ss_dssp C--SCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCC----SSCCCCCCCEEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccc----cccccCCCCceE
Confidence 6 789999999999999987777788999998766533 334457889999888888776310 000000123456
Q ss_pred eeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 016853 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (381)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (381)
++++|++++.+++..+...+++.+.+|..+++|+++|+++|||..|++.|.||+..+++++.+|+.+..+.
T Consensus 188 ~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~--------- 258 (423)
T 1z2l_A 188 FVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRM--------- 258 (423)
T ss_dssp EEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH---------
T ss_pred EEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHhc---------
Confidence 67789998876665555677888999999999999999999995483379999999999999999875421
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC
Q 016853 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (381)
Q Consensus 240 ~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~ 319 (381)
+| .++++++.|++++.+.|+||++|++.+|+|+++.++.++++++|+++++.++..++++++++....+|+
T Consensus 259 ------~~---~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~~~~~~ 329 (423)
T 1z2l_A 259 ------GD---PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEP 329 (423)
T ss_dssp ------CT---TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEECC
T ss_pred ------CC---CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCC
Confidence 12 468999999994489999999999999999999999999999999999998888899988887777888
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
+.+++++++.+.+++++. |.+ +...+++|+||+++|++.+|++++|+|+..
T Consensus 330 ~~~~~~l~~~~~~~~~~~-g~~-------~~~~~~~ggtD~~~~~~~~p~~~~~~p~~~ 380 (423)
T 1z2l_A 330 VPMNKELVATLTELCERE-KLN-------YRVMHSGAGHDAQIFAPRVPTCMIFIPSIN 380 (423)
T ss_dssp EECCHHHHHHHHHHHHHT-TCC-------EEEEEESSCCTHHHHTTTSCEEEEEECCGG
T ss_pred ccCCHHHHHHHHHHHHHc-CCC-------eEEecCCCcccHHHHHhhCCEEEEEeCCCC
Confidence 888999999999999987 543 223356799999999988999999999764
No 3
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=1.3e-47 Score=382.32 Aligned_cols=341 Identities=27% Similarity=0.385 Sum_probs=286.1
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcCC
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGK 81 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~~ 81 (381)
|++|.++++||.++|+++||+++++..+|++++++|.++ +|+|+|+|||||||.+|.+|||++++++|+|+++|++.++
T Consensus 66 s~~e~~~~~~l~~~l~~~G~~v~~d~~gnvia~~~g~~~-~~~i~l~~H~DtVp~~g~~D~k~gvaa~L~a~~~L~~~~~ 144 (474)
T 2v8h_A 66 TALDGAMRDWFTNECESLGCKVKVDKIGNMFAVYPGKNG-GKPTATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKDNNY 144 (474)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEBTTCCEEEEECCSSC-CSCEEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEecCceEEEEECCCCC-CCeEEEEEecccCCCCCCcCCHHHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999998888999999987653 4699999999999999989999999999999999999987
Q ss_pred CCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCcccc-cccc---CCCCcHHHHHHHCCCChhhhhhhhccCCCccc
Q 016853 82 LGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSD---KSGVTVLDALRENSIDIAEESLLQLKYDPASV 157 (381)
Q Consensus 82 ~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~-~~~d---~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~ 157 (381)
.++++|.|+|+++||+++|+.++.|++.+...+..+.+ ...| .+|+.+.+.+.+.|+..+.+. .+..+.+
T Consensus 145 --~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~----~~~~e~~ 218 (474)
T 2v8h_A 145 --VPNYDVCVVVWFNAEGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPA----SYKENEI 218 (474)
T ss_dssp --CCSSCEEEEECTTCSCSSSSCTTHHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCS----CTTTSCC
T ss_pred --CCCCCEEEEEECCccCCCCCCCcccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccc----cccccch
Confidence 78999999999999998787788999999765443221 1234 678888888777676421000 1112346
Q ss_pred hheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCcccc
Q 016853 158 WGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAELIVLLERLCKHPKDFLSY 236 (381)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~ 236 (381)
.+++++|++++.+++..+...+++.+.+|..+++|+++|+++|||..| + .+.||+..+++++.+|+.+..+
T Consensus 219 ~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P-~~~g~nAi~~~a~~i~~l~~~~~~------- 290 (474)
T 2v8h_A 219 DAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTP-WRLRKDALLMSSKMIVAASEIAQR------- 290 (474)
T ss_dssp SEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCC-GGGCCCHHHHHHHHHHHHHHHHHH-------
T ss_pred hhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCC-cccCCCHHHHHHHHHHHHHHHHhh-------
Confidence 677889999998877666677888889999999999999999999658 5 7999999999999999887542
Q ss_pred CCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHH---cCceEEEEE
Q 016853 237 DGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK---RSVSCIVER 313 (381)
Q Consensus 237 ~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~---~~~~v~~~~ 313 (381)
. .++++++.|++++++.|+||++|++.+++|+++.++.+++.++|+++++..+.. ++++++++.
T Consensus 291 -----------~--~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~g~~~~~~~ 357 (474)
T 2v8h_A 291 -----------H--NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESET 357 (474)
T ss_dssp -----------T--TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCCTTCCCEEEEEE
T ss_pred -----------c--CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhcccCCcEEEEEE
Confidence 1 468999999993399999999999999999999999999999999999887666 788888887
Q ss_pred eccCCCccCCHHHHHHHHHHHHHHHh-h-ccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 314 KHDANAVMCDADLSSQLKSASYAALK-R-MTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~a~~~~~g-~-~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
...+|++.+++++++.+.+++++. | . + +...+++|+||+++|++.+|++++|+|+..
T Consensus 358 ~~~~~~~~~d~~l~~~~~~a~~~~-G~~~~-------~~~~~~~ggtD~~~~~~~~P~~~~fgp~~~ 416 (474)
T 2v8h_A 358 LQVSPAVNFHEVCIECVSRSAFAQ-FKKDQ-------VRQIWSGAGHDSCQTAPHVPTSMIFIPSKD 416 (474)
T ss_dssp EEEECCEECCHHHHHHHHHHHHHH-SCGGG-------EEEEEESSCCTHHHHTTTSCEEEEEECCGG
T ss_pred ecCCCCccCCHHHHHHHHHHHHHc-CCCCc-------ceecCCcCCccHHHHHhhCCEEEEEeCCCC
Confidence 777888888999999999999998 6 4 3 223356799999999988999999999754
No 4
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-41 Score=331.20 Aligned_cols=297 Identities=11% Similarity=0.050 Sum_probs=241.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCC---CEEEEecCCCCCCCeEEEeecccCCc---CCCCCcChHHHHHHHHHHH
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG---NVHGRVEGLNASAQALLIGSHLDTVV---DAGIFDGSLGIITAISALK 74 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~g---nv~a~~~g~~~~~~~i~l~~H~DtVp---~~g~~D~k~giaa~l~a~~ 74 (381)
+|++|.++++||.++|+++||+++++..+ |++++++|..+ +|+|+|.+|||||| +++++|+|++ ++|.|++
T Consensus 31 ~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~-g~~i~l~ah~D~vpg~~ha~G~d~~~a--~~l~aa~ 107 (394)
T 3ram_A 31 LGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLD-GPAIGFLAEYDALPGLGHACGHNIIGT--ASVLGAI 107 (394)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSS-SCEEEEEECCCCCTTTSSTTCHHHHHH--HHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCC-CCEEEEEEecccCCCcceECCccHHHH--HHHHHHH
Confidence 58899999999999999999999877655 89999987653 59999999999999 4577898875 4588889
Q ss_pred HHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchH-HHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCC
Q 016853 75 VLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSA-ALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYD 153 (381)
Q Consensus 75 ~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~-~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~ 153 (381)
+|++.+. .++++|.|+|+++||.+. ..|++ .++. + |. +
T Consensus 108 ~L~~~~~--~~~g~v~~~f~~~EE~~~----~~Ga~~~~~~------------------~-----g~-----------~- 146 (394)
T 3ram_A 108 GLKQVID--QIGGKVVVLGCPAEEGGE----NGSAKASYVK------------------A-----GV-----------I- 146 (394)
T ss_dssp HHHTTHH--HHCSEEEEEECCCTTCCT----TCCHHHHHHH------------------H-----TG-----------G-
T ss_pred HHHHhHh--hCCceEEEEEECCccCCC----CCchHHHHHH------------------c-----CC-----------c-
Confidence 9988754 689999999999999741 25888 6641 0 10 0
Q ss_pred CccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHhcCCCC
Q 016853 154 PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAG-TVPMSMRQDPMTAAAELIVLLERLCKHPKD 232 (381)
Q Consensus 154 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~-~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~ 232 (381)
+.+.+++.+|+.++. .. ..+.+|..+++|+++|+++|+| . | +.|+||+..+++++.+|+.+....
T Consensus 147 -~~~d~~~~~h~~~~~-------~~--~~~~~g~~~~~i~v~Gk~~Ha~~~-P-~~g~nAi~~a~~~i~~l~~l~~~~-- 212 (394)
T 3ram_A 147 -DQIDIALMIHPGNET-------YK--TIDTLAVDVLDVKFYGKSAHASEN-A-DEALNALDAMISYFNGVAQLRQHI-- 212 (394)
T ss_dssp -GGCSEEECCEEESSB-------BC--CCCBCEEEEEEEEEECBCCBHHHH-G-GGCBCHHHHHHHHHHHHHHHGGGS--
T ss_pred -ccCCEEEEECCcccc-------CC--CccccceeEEEEEEEccccccCCC-C-cCCCCHHHHHHHHHHHHHHHHhhC--
Confidence 012233445765431 11 2348899999999999999999 6 9 689999999999999999885421
Q ss_pred ccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEE
Q 016853 233 FLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVE 312 (381)
Q Consensus 233 ~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~ 312 (381)
+ ..++++++.+++ |++.|+||++|++.+++|..+.++.+++.++|+++++.++..++++++++
T Consensus 213 --------------~--~~~~~~~~~i~g-G~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~ 275 (394)
T 3ram_A 213 --------------K--KDQRVHGVILDG-GKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFG 275 (394)
T ss_dssp --------------C--TTCEEEEEEEEB-CSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred --------------C--CCCeeEEEEEEC-CCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 1 235678888899 89999999999999999999999999999999999999988899999999
Q ss_pred E-eccCCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCCC
Q 016853 313 R-KHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 379 (381)
Q Consensus 313 ~-~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~~ 379 (381)
+ ...+|++.+|+++++.+.+++++ +| .+ . ....+++|++|+++|++.+|++++|+|+.++
T Consensus 276 ~~~~~~~~~~~d~~l~~~~~~a~~~-~G-~~----~-~~~~~~~g~~D~~~~~~~~P~~~~~~g~~~~ 336 (394)
T 3ram_A 276 PIQNGVNEFIKTPKLDDLFAKYAEE-VG-EA----V-IDDDFGYGSTDTGNVSHVVPTIHPHIKIGSR 336 (394)
T ss_dssp ESSCCBCCCCCCHHHHHHHHHHHHH-TT-CC----B-CCSCCCCBCCTHHHHTTTSCBCCCEEECSCT
T ss_pred EecCCCCCccCCHHHHHHHHHHHHH-hC-cc----c-ccCCCCcccccHHHHHHHhchheEEeeecCC
Confidence 8 77889999999999999999988 46 32 1 1233567999999999889999999998654
No 5
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=4.8e-41 Score=328.56 Aligned_cols=303 Identities=19% Similarity=0.251 Sum_probs=231.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCC--CEEEEecCCCCCCCeEEEeecccCCcCC------------C---CCcCh
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG--NVHGRVEGLNASAQALLIGSHLDTVVDA------------G---IFDGS 63 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~g--nv~a~~~g~~~~~~~i~l~~H~DtVp~~------------g---~~D~k 63 (381)
+|++|.++++||.++|+++|+++++++.+ |++++++|..+ +|+|+|++||||||.+ | +.++|
T Consensus 47 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~-~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~k 125 (404)
T 1ysj_A 47 LSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGRED-GPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHD 125 (404)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSC-CCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHH
T ss_pred CCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCC-CCEEEEEEecccccCCCCCCCCcccCCCCceEcCcCh
Confidence 47889999999999999999999777665 99999987643 5899999999999964 2 13578
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChh
Q 016853 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (381)
Q Consensus 64 ~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~ 143 (381)
++++++|.|+++|++.+. .++++|.++|+++||.+ .|++.+... |
T Consensus 126 g~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~------~G~~~~~~~-----------------------g---- 170 (404)
T 1ysj_A 126 FHTASIIGTAMLLNQRRA--ELKGTVRFIFQPAEEIA------AGARKVLEA-----------------------G---- 170 (404)
T ss_dssp HHHHHHHHHHHHHHTCGG--GCSSEEEEEEESCTTTT------CHHHHHHHT-----------------------T----
T ss_pred HHHHHHHHHHHHHHhccc--cCCceEEEEEecccccc------hhHHHHHhc-----------------------C----
Confidence 999999999999998865 78999999999999983 489887520 0
Q ss_pred hhhhhhccCCCccchheeeecccCCcccccCCCcceEEEe--eecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHH
Q 016853 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQG--IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (381)
Q Consensus 144 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~ 221 (381)
.++ .+.+.+.+|++++... + ...+..| .+|..+++|+++|+++|+|. | +.|.||+..+++++.
T Consensus 171 -------~~~--~~d~~i~~h~ep~~~~---g-~v~~~~g~~~~g~~~~~i~v~G~~~Has~-P-~~g~nAi~~~~~~i~ 235 (404)
T 1ysj_A 171 -------VLN--GVSAIFGMHNKPDLPV---G-TIGVKEGPLMASVDRFEIVIKGKGGHASI-P-NNSIDPIAAAGQIIS 235 (404)
T ss_dssp -------TTT--TEEEEEEEEEETTSCT---T-EEEECSEEEECCEEEEEEEEECC----------CCCCHHHHHHHHHH
T ss_pred -------CCc--CCCEEEEEecCCCCCC---c-eEEeccChhhcccceEEEEEEccCccccC-c-ccCCCHHHHHHHHHH
Confidence 010 1123334677754211 1 1111123 67899999999999999997 9 799999999999999
Q ss_pred HHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHH
Q 016853 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQI 301 (381)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~ 301 (381)
+|+.+..+.. +|. .+++++++.|++ |.+.|+||++|++.+|+|+.|.++.+++.++|+++++..
T Consensus 236 ~l~~~~~~~~--------------~~~-~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~ 299 (404)
T 1ysj_A 236 GLQSVVSRNI--------------SSL-QNAVVSITRVQA-GTSWNVIPDQAEMEGTVRTFQKEARQAVPEHMRRVAEGI 299 (404)
T ss_dssp HHC--------------------------CCEEEEEEEEE-CSCSSSCCSEEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhc--------------CCC-CCcEEEEEEEEc-CCCCceecCceEEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 9987643211 233 367999999999 899999999999999999999999999999999999998
Q ss_pred HHHcCceEEEEEeccCCCccCCHHHHHHHHHHHHHH-HhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 302 CEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAA-LKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 302 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~a~~~~-~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
+..++++++++....+|++.+++++++.+.+++++. +|.++ .. +++|++|+++|++.+|++++++|..+
T Consensus 300 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~g~~~-------~~-~~~g~tD~~~~~~~~p~~~~~~G~~~ 369 (404)
T 1ysj_A 300 AAGYGAQAEFKWFPYLPSVQNDGTFLNAASEAAARLGYQTVH-------AE-QSPGGEDFALYQEKIPGFFVWMGTNG 369 (404)
T ss_dssp HHHTTCEEEEEEEEEECCEEECGGGHHHHHHHHHHTTCEEEE-------CC-CBSSCCTHHHHHTTSCEEEEEEECCC
T ss_pred HHHhCCEEEEEEecCCCCccCCHHHHHHHHHHHHHhcCCccc-------cc-cCCccchHHHHHHHCCeEEEEEcCCC
Confidence 888899988887777888888889999999999998 66542 12 45688999999988999866666543
No 6
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=5.1e-41 Score=324.94 Aligned_cols=292 Identities=19% Similarity=0.254 Sum_probs=238.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCC--------CCEEEEecCCCCCCCeEEEeecccCCcCCCC-------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHL--------GNVHGRVEGLNASAQALLIGSHLDTVVDAGI------------- 59 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~--------gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~------------- 59 (381)
+|++|.++++||.++|+++|++++.+.. +|++++++|..+++|+|+|.+||||||.++.
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~ 100 (373)
T 3gb0_A 21 ETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSD 100 (373)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSCSSCCCEEETTEEECC
T ss_pred CCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCCCCcCcEEECCEEECC
Confidence 4789999999999999999999988763 7999999886334699999999999986532
Q ss_pred ------CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHH
Q 016853 60 ------FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLD 133 (381)
Q Consensus 60 ------~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~ 133 (381)
.|||++++++|.++++|++.+ .++++|.++|+++||.+ ..|++.+.. .
T Consensus 101 G~~~~g~D~k~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~----~-------------- 154 (373)
T 3gb0_A 101 GTTILGADDKAGLASMFEAIRVLKEKN---IPHGTIEFIITVGEESG-----LVGAKALDR----E-------------- 154 (373)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHTT---CCCCCEEEEEESCGGGT-----SHHHHHSCG----G--------------
T ss_pred CccccCcccHHHHHHHHHHHHHHHhcC---CCCCCEEEEEEeccccC-----chhhhhhCH----H--------------
Confidence 399999999999999999987 46899999999999984 357877631 0
Q ss_pred HHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHH
Q 016853 134 ALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPM 213 (381)
Q Consensus 134 ~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi 213 (381)
.+++ .++ +|.+++ .....+..+.+|..+++|+++|+++|+|..| +.|.||+
T Consensus 155 -----------------~~~~--~~~---~~~~~~------~~~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p-~~g~nai 205 (373)
T 3gb0_A 155 -----------------RITA--KYG---YALDSD------GKVGEIVVAAPTQAKVNAIIRGKTAHAGVAP-EKGVSAI 205 (373)
T ss_dssp -----------------GCCC--SEE---EEEEEC------SCTTEEEEEECEEEEEEEEEECBCCBTTTCG-GGSBCHH
T ss_pred -----------------hcCC--CEE---EEEcCC------CCCCeEEEcCCCcEEEEEEEEeEecCCCCCh-hhCcCHH
Confidence 0111 122 354432 1223567788999999999999999999449 6999999
Q ss_pred HHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHH
Q 016853 214 TAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYE 293 (381)
Q Consensus 214 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~ 293 (381)
..+++++.+|+.... + ..++++++.|++ |.+.|+||++|++.+|+|+.+.++.+++.++
T Consensus 206 ~~~~~~i~~l~~~~~-----------------~---~~~~~~vg~i~g-G~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~ 264 (373)
T 3gb0_A 206 TIAAKAIAKMPLGRI-----------------D---SETTANIGRFEG-GTQTNIVCDHVQIFAEARSLINEKMEAQVAK 264 (373)
T ss_dssp HHHHHHHTTSCCEEE-----------------E---TTEEEEEEEEEE-CSCTTBCCCEEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcccccC-----------------C---CccccceeEEec-CcccccccceEEEEEEEecCCHHHHHHHHHH
Confidence 999999987753110 1 257899999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeE
Q 016853 294 LSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVC 370 (381)
Q Consensus 294 i~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~ 370 (381)
|+++++.++..+++++++++...+|++ .+++++++.+.+++++ .|.+ +...+++|+||+++|++. +|++
T Consensus 265 i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~-------~~~~~~~g~~D~~~~~~~gip~~ 336 (373)
T 3gb0_A 265 MKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEK-IGRT-------PSLHQSGGGSDANVIAGHGIPTV 336 (373)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEECCEECCTTCHHHHHHHHHHHH-TTCC-------CEEEECSSCCHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhcCCeEEEEEecccCCcccCCCCHHHHHHHHHHHH-hCCC-------ceEecccCcchHHHHHhCCCCEE
Confidence 999999998889999998887778876 4688899999999998 4542 233456789999999987 9999
Q ss_pred EEEEee
Q 016853 371 SLLCRL 376 (381)
Q Consensus 371 ~~~~~~ 376 (381)
+++.|.
T Consensus 337 ~~g~~~ 342 (373)
T 3gb0_A 337 NLAVGY 342 (373)
T ss_dssp EEECCC
T ss_pred EecCCC
Confidence 877765
No 7
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.5e-40 Score=324.15 Aligned_cols=292 Identities=18% Similarity=0.220 Sum_probs=236.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcC--------CCCEEEEecCC--CCCCCeEEEeecccCCcCC-------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGL--NASAQALLIGSHLDTVVDA------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~--------~gnv~a~~~g~--~~~~~~i~l~~H~DtVp~~------------- 57 (381)
+|++|.++++||.++|+++|++++.+. .+|++++++|+ .+++|+|+|.|||||||.+
T Consensus 39 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~ 118 (396)
T 3rza_A 39 ETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYI 118 (396)
T ss_dssp BTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEE
T ss_pred CCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEE
Confidence 478899999999999999999998875 47999999875 1246999999999999854
Q ss_pred ---CC----CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCc
Q 016853 58 ---GI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (381)
Q Consensus 58 ---g~----~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~ 130 (381)
|. .|||++++++|.|+++|++.+ .++++|.++|+++||.+ ..|++.+.. .
T Consensus 119 ~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~---~------------ 175 (396)
T 3rza_A 119 YSDGTTILGADDKAGLAAMLEVLQVIKEQQ---IPHGQIQFVITVGEESG-----LIGAKELNS---E------------ 175 (396)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHHHT---CCCCCEEEEEESCGGGT-----SHHHHHCCG---G------------
T ss_pred ECCCccccCcccHHHHHHHHHHHHHHHhcC---CCCCCEEEEEEcccccc-----cHhHhhhch---h------------
Confidence 22 399999999999999999887 46899999999999984 357876531 0
Q ss_pred HHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCC
Q 016853 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQ 210 (381)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~ 210 (381)
.+++ .++ +|++++. ....+..+.+|..+++|+++|+++|+|. | +.|+
T Consensus 176 --------------------~~~~--~~~---~~~~~~~------~~g~i~~~~~g~~~~~i~v~G~~~Ha~~-p-~~g~ 222 (396)
T 3rza_A 176 --------------------LLDA--DFG---YAIDASA------DVGTTVVGAPTQMLISAKIIGKTAHAST-P-KEGV 222 (396)
T ss_dssp --------------------GCCC--SEE---EEEEESS------CTTCEEEEECEEEEEEEEEECBCCBTTS-G-GGSB
T ss_pred --------------------hccc--ceE---EEEecCC------CcceEEEcCCceEEEEEEEEeEecCCCC-c-cccc
Confidence 0111 122 3554321 1234677899999999999999999995 9 6999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHH
Q 016853 211 DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETV 290 (381)
Q Consensus 211 NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~ 290 (381)
||+..+++++.+|+.... + ..++++++.|++ |.+.|+||++|++.+++|+.+.++.+.+
T Consensus 223 nai~~~~~~i~~l~~~~~-----------------~---~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~~~~~~ 281 (396)
T 3rza_A 223 SAINIAAKAISRMKLGQV-----------------D---EITTANIGKFHG-GSATNIVADEVILEAEARSHDPERIKTQ 281 (396)
T ss_dssp CHHHHHHHHHHHSCCEEE-----------------E---TTEEEEEEEEEE-CSCTTBCCCEEEEEEEEEESSHHHHHHH
T ss_pred cHHHHHHHHHHhcccCCC-----------------C---CCceeeeeEEec-CCCCcccCceEEEEEEEEeCCHHHHHHH
Confidence 999999999988764211 1 257899999999 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCceEEEEEeccCCCc--cCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-c
Q 016853 291 LYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-T 367 (381)
Q Consensus 291 ~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~ 367 (381)
.++|+++++..+..+++++++++...+|++ .+++++++.+.+++++. |.+ +...+++|+||+++|++. +
T Consensus 282 ~~~i~~~~~~~a~~~g~~~~i~~~~~~p~~~~~~d~~l~~~~~~~~~~~-g~~-------~~~~~~~g~tD~~~~~~~gi 353 (396)
T 3rza_A 282 VKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNL-GLS-------ANTIISGGGSDGSIINTFGI 353 (396)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEEECCEECCTTSHHHHHHHHHHHHT-TCC-------CCEEECSSCCHHHHHGGGTC
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEeccCCcccCCCcHHHHHHHHHHHHc-CCC-------ceecccceeccHHHHhhCCC
Confidence 999999999988889999999888788887 46889999999999874 532 233456789999999987 9
Q ss_pred CeEEEEEeeC
Q 016853 368 KVCSLLCRLN 377 (381)
Q Consensus 368 p~~~~~~~~~ 377 (381)
|+++++.|..
T Consensus 354 P~~~~g~g~~ 363 (396)
T 3rza_A 354 PSVILGVGYE 363 (396)
T ss_dssp CEEEEECCCB
T ss_pred cEEEECCCCC
Confidence 9998777653
No 8
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=5e-40 Score=322.68 Aligned_cols=302 Identities=19% Similarity=0.223 Sum_probs=223.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcC-CCCEEEEecCCCCCCCeEEEeecccCCcCC------------C---CCcChH
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------G---IFDGSL 64 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~-~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------g---~~D~k~ 64 (381)
+|++|.++++||.++|+++|++++.+. .+|++++++|.. . |+|+|++||||||.+ | +.++|+
T Consensus 43 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~-~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~ 120 (418)
T 1xmb_A 43 LGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGE-P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 120 (418)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSS-S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHH
T ss_pred CCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCC-C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchH
Confidence 478899999999999999999988775 689999998754 2 899999999999964 2 124579
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhh
Q 016853 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (381)
Q Consensus 65 giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~ 144 (381)
+++++|.|+++|++.+. .++++|.++|+++|| +. .|++.++.. |
T Consensus 121 ~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE-g~-----~G~~~~~~~-----------------------g----- 164 (418)
T 1xmb_A 121 HVTMLLGAAKILHEHRH--HLQGTVVLIFQPAEE-GL-----SGAKKMREE-----------------------G----- 164 (418)
T ss_dssp HHHHHHHHHHHHHHTGG--GCSSEEEEEEECCTT-TT-----CHHHHHHHT-----------------------T-----
T ss_pred HHHHHHHHHHHHHhccc--cCCceEEEEEecccc-cc-----ccHHHHHHc-----------------------C-----
Confidence 99999999999999875 689999999999999 42 588887520 0
Q ss_pred hhhhhccC-CCccchheeeecccCCcccccCCC-cceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHH
Q 016853 145 ESLLQLKY-DPASVWGYIEVHIEQGPVLEWVGF-PLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVL 222 (381)
Q Consensus 145 ~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~ 222 (381)
.+ ++| +.+.+|++++.. .+. ...+..+++|..+++|+++|+++|+|. | +.|.||+.++++++.+
T Consensus 165 ------~~~~~d---~~i~~~~~~~~~---~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~-P-~~g~nAi~~~a~~i~~ 230 (418)
T 1xmb_A 165 ------ALKNVE---AIFGIHLSARIP---FGKAASRAGSFLAGAGVFEAVITGKGGHAAI-P-QHTIDPVVAASSIVLS 230 (418)
T ss_dssp ------TTTTEE---EEEEEEEEEEEE---TTCEEECSEEEECEEEEEEEEEEEC-----------CCHHHHHHHHHHHH
T ss_pred ------CcCCCC---EEEEEecCCCCC---CceeEeeeccccccceeEEEEEEecCcccCC-C-ccCCCHHHHHHHHHHH
Confidence 01 122 233456654322 121 112334689999999999999999996 9 6899999999999999
Q ss_pred HHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHH
Q 016853 223 LERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQIC 302 (381)
Q Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~ 302 (381)
|+.+..+.. +|. .+++++++.|++ |.+.|+||++|++.+++|+.| +.++++++|+++++..+
T Consensus 231 l~~~~~~~~--------------~~~-~~~t~~vg~i~g-G~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a 292 (418)
T 1xmb_A 231 LQQLVSRET--------------DPL-DSKVVTVSKVNG-GNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQA 292 (418)
T ss_dssp HHTTCBCCS--------------SGG-GCEEEEEEEEC---------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccc--------------CCC-CCcEEEEEEEEe-cCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHH
Confidence 987653321 233 367999999999 899999999999999999999 89999999999999988
Q ss_pred HHcCceEEEEEecc----CCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeC
Q 016853 303 EKRSVSCIVERKHD----ANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLN 377 (381)
Q Consensus 303 ~~~~~~v~~~~~~~----~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~ 377 (381)
..+++++++++... +|++.+++++++.+.+++++++|..+ . .....++|++|+++|++.+|++++++|..
T Consensus 293 ~~~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~~~~~g~~~----~-~~~~~~~g~tD~~~~~~~~P~~~~~~G~~ 366 (418)
T 1xmb_A 293 AVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEA----F-VEAAPVMGSEDFSYFAETIPGHFSLLGMQ 366 (418)
T ss_dssp HHTTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHHHHHHCGGG----E-EECCCBCCCCTHHHHHTTSCEEEEEEEEE
T ss_pred HHhCCeEEEEEccCCcccCCCccCCHHHHHHHHHHHHHhcCCcc----e-eccCCCCCcchHHHHHHHCCEEEEEEeCC
Confidence 88899988887666 67777899999999999999887642 0 11234568999999998899987655543
No 9
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.3e-40 Score=323.96 Aligned_cols=300 Identities=16% Similarity=0.149 Sum_probs=232.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc----------------------CCCCEEEEecCCCCCCCeEEEeecccCCcCC-
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVD----------------------HLGNVHGRVEGLNASAQALLIGSHLDTVVDA- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~----------------------~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~- 57 (381)
+|++|.++++||.++|+++|+++++. ..+|++++++|.. ++|+|+|++||||||.+
T Consensus 41 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~~-~~~~v~l~aH~D~vp~~~ 119 (433)
T 3pfo_A 41 VRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDG-KGRSLILQGHIDVVPEGP 119 (433)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCCC-CSCCEEEEEECCBCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecCC-CCCEEEEEcccCCcCCCC
Confidence 47889999999999999999998652 3468999998744 46999999999999853
Q ss_pred ---------------------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccC
Q 016853 58 ---------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (381)
Q Consensus 58 ---------------------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l 116 (381)
|..|||++++++|.|+++|++.+. .++++|.|+|+++||.++ .|++.+..
T Consensus 120 ~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~-----~G~~~~~~-- 190 (433)
T 3pfo_A 120 VDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGY--APDARVHVQTVTEEESTG-----NGALSTLM-- 190 (433)
T ss_dssp GGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTE--EESSCEEEEEESCTTTTC-----HHHHHHHH--
T ss_pred cccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCC--CCCccEEEEEEecCccCC-----hhHHHHHh--
Confidence 677999999999999999999886 689999999999999852 47776541
Q ss_pred CccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEe
Q 016853 117 PVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG 196 (381)
Q Consensus 117 ~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G 196 (381)
.+ +++|.+ +..+++ ...+..+.+|..+++|+++|
T Consensus 191 ---------------------~~------------~~~d~~-----i~~ep~--------~~~i~~~~~G~~~~~i~v~G 224 (433)
T 3pfo_A 191 ---------------------RG------------YRADAC-----LIPEPT--------GHTLTRAQVGAVWFRLRVRG 224 (433)
T ss_dssp ---------------------TT------------CCCSEE-----EECCCC--------SSCEEEEECEEEEEEEEEEC
T ss_pred ---------------------cC------------CCCCEE-----EEeCCC--------CCceEEecceEEEEEEEEEc
Confidence 11 122322 122321 12477789999999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccC----CCCeEEEEEEEEecCCCCceeCCe
Q 016853 197 SQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESL----SSSLVCTVGEISSWPSASNVIPGE 272 (381)
Q Consensus 197 ~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~ti~~~~i~g~g~~~NvIP~~ 272 (381)
+++|+|. | +.|.||+..+++++.+|+.+..+..+... .+|. ..+++++++.|++ |.+.|+||++
T Consensus 225 ~~~Ha~~-p-~~g~nAi~~~~~~i~~l~~l~~~~~~~~~---------~~~~~~~~~~~~~~~vg~i~g-G~~~NvIP~~ 292 (433)
T 3pfo_A 225 TPVHVAY-S-ETGTSAILSAMHLIRAFEEYTKELNAQAV---------RDPWFGQVKNPIKFNVGIIKG-GDWASSTAAW 292 (433)
T ss_dssp CCCBGGG-G-GGSCCHHHHHHHHHHHHHHHHHHHHHHGG---------GCTTTTTSSSCSCEEEEEEEE-CSCTTBCCCE
T ss_pred CCCccCC-C-CcCcCHHHHHHHHHHHHHHHHHHhhhccc---------cCccccccCCCceEEeeeEEC-CCCCcccCcE
Confidence 9999996 9 79999999999999999987542100000 0121 1356899999999 8999999999
Q ss_pred EEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcC----ceEEEEEe-ccCCCcc--CCHHHHHHHHHHHHHHHhhccCCC
Q 016853 273 VTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS----VSCIVERK-HDANAVM--CDADLSSQLKSASYAALKRMTGAT 345 (381)
Q Consensus 273 a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~----~~v~~~~~-~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~ 345 (381)
|++.+++|++|.++.++++++|++++++++..++ +++++++. ..+|++. .++++++.+.+++++.+|.+
T Consensus 293 a~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~---- 368 (433)
T 3pfo_A 293 CELDCRLGLLTGDTPQEAMRGIEKCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAP---- 368 (433)
T ss_dssp EEEEEEEEECTTCCHHHHHHHHHHHHHHHHTTCHHHHHSCCEEEEEEEEECCEECCTTCHHHHHHHHHHHHHHSSC----
T ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhCcccccCCeEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCC----
Confidence 9999999999999999999999999998876542 34555554 3456654 57889999999999988764
Q ss_pred CcccccccCcccHHHHHHhhh--cCeEEEEEee
Q 016853 346 QHEIPVIMSGAGHDAMAMSHL--TKVCSLLCRL 376 (381)
Q Consensus 346 ~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~~~ 376 (381)
+...+++|++|+++|++. +|+++ |.|+
T Consensus 369 ---~~~~~~~g~~D~~~~~~~~giP~v~-~Gp~ 397 (433)
T 3pfo_A 369 ---LDARLSTAVNDTRYYSVDYGIPALC-YGPY 397 (433)
T ss_dssp ---CCEEEESSCCTHHHHHHTTCCCEEE-CCCC
T ss_pred ---CceeeeeeeccHHHHHhhCCCCEEE-ECCC
Confidence 223356689999999874 99885 4443
No 10
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=5.9e-39 Score=317.38 Aligned_cols=301 Identities=17% Similarity=0.195 Sum_probs=232.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc----------------------------------------CCCCEEEEecCCCC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVD----------------------------------------HLGNVHGRVEGLNA 40 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~----------------------------------------~~gnv~a~~~g~~~ 40 (381)
+|++|.++++||.++|+++||+++.. ...|++++++|..+
T Consensus 29 ~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vva~~~~~~~ 108 (445)
T 3io1_A 29 SGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRP 108 (445)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTTGGGGTTTCCCEEEEEECSSC
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccccccccccccccCCCCEEEEEEeCCCC
Confidence 57899999999999999999998764 23689999987653
Q ss_pred CCCeEEEeecccCCcCC-------------------C---CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccc
Q 016853 41 SAQALLIGSHLDTVVDA-------------------G---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (381)
Q Consensus 41 ~~~~i~l~~H~DtVp~~-------------------g---~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE 98 (381)
+|+|+|.+||||||.+ | ++..+++++++|.|+++|++.+. .++++|.|+|+++||
T Consensus 109 -g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa~~L~~~~~--~~~g~v~l~f~p~EE 185 (445)
T 3io1_A 109 -GPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYAA--QLNGVIKLIFQPAEE 185 (445)
T ss_dssp -CCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHHHHHHHHTGG--GCCSEEEEEEESCTT
T ss_pred -CCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHHHHHHhCcC--cCCceEEEEEecccc
Confidence 5999999999999942 1 11224678899999999998875 789999999999999
Q ss_pred CCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcc
Q 016853 99 GVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPL 178 (381)
Q Consensus 99 ~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 178 (381)
.+ .|++.++. .|. .-++|.+ +.+|+.++.. .+
T Consensus 186 ~~------~Ga~~~i~-----------------------~g~----------~~~~d~~---~~~h~~~~~~---~g--- 217 (445)
T 3io1_A 186 GT------RGARAMVA-----------------------AGV----------VDDVDYF---TAIHIGTGVP---AG--- 217 (445)
T ss_dssp TT------CHHHHHHH-----------------------TTT----------TTTCSEE---EEEEEEEEEE---TT---
T ss_pred cc------chHHHHHH-----------------------cCC----------cccccee---EEEeccCCCC---CC---
Confidence 64 48888752 010 0012322 3356432111 11
Q ss_pred eEEEeeec---ceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEE
Q 016853 179 GVVQGIAG---QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCT 255 (381)
Q Consensus 179 ~~~~g~~g---~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~ 255 (381)
.+..+.+| ..+++|+++|+++|+|..| +.|+||+.++++++.+|+.+.+. ..+.++++
T Consensus 218 ~i~~~~~g~~a~~~~~i~v~Gk~~HaGs~P-~~g~nAi~~aa~~i~~l~~l~~~------------------~~~~~~~~ 278 (445)
T 3io1_A 218 TVVCGGDNFMATTKFDVQFSGVAAHAGGKP-EDGRNALLAAAQAALGLHAIPPH------------------SAGASRVN 278 (445)
T ss_dssp BEESCCCCBCEEEEEEEEEECCCSSTTCCG-GGCCCHHHHHHHHHHHHHTCCCB------------------TTBCEEEE
T ss_pred eEEEecCCeeEEEEEEEEEEeecCCCCCCC-cCCcCHHHHHHHHHHHHHHHHhh------------------cCCCeEEE
Confidence 12223333 4799999999999994349 69999999999999999977321 11357899
Q ss_pred EEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCccCCHHHHHHHHHHHH
Q 016853 256 VGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASY 335 (381)
Q Consensus 256 ~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~a~~ 335 (381)
++.|++ |.+.|+||++|++.+++|+.+.++.++++++|+++++.++..+++++++++...++++.+|+++++.+.++++
T Consensus 279 vg~i~g-G~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~~d~~l~~~~~~a~~ 357 (445)
T 3io1_A 279 VGVMQA-GTGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAAAMYEARYELRMMGAATASAPSPAWVDYLREQAA 357 (445)
T ss_dssp EEEEEE-CSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECCCCCCHHHHHHHHHHHH
T ss_pred EEEEec-CCCCceeCCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCcCCCHHHHHHHHHHHH
Confidence 999999 8999999999999999999999999999999999999999889999999988888899999999999999999
Q ss_pred HHHhhccCCCCccccccc-CcccHHHHHHhhhcC-----eEEEEEeeC
Q 016853 336 AALKRMTGATQHEIPVIM-SGAGHDAMAMSHLTK-----VCSLLCRLN 377 (381)
Q Consensus 336 ~~~g~~~~~~~~~~~~~~-~~g~tD~~~~~~~~p-----~~~~~~~~~ 377 (381)
+.+|..+ . ...+. .+|++|+++|++.+| .+++++|..
T Consensus 358 ~~~g~~~----v-~~~~~~~~g~~D~~~~~~~~P~~gg~~~~~~~G~~ 400 (445)
T 3io1_A 358 RVPGVQQ----A-VDRIAAPAGSEDATLMMARVQARGGLASYMIFGTE 400 (445)
T ss_dssp HSTTCCB----C-BSSCCCCCBCCTHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HhcCCcc----c-eecCCCCccHHHHHHHHHHhcccCCceEEEEEeCC
Confidence 9866431 0 11222 368999999998876 566666653
No 11
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=8.1e-40 Score=322.71 Aligned_cols=289 Identities=18% Similarity=0.148 Sum_probs=226.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCE-EEEcCCCCEEEEecCCCC-CCCeEEEeecccCCcCC--------------C-------
Q 016853 2 SPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------G------- 58 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~-~~~~~~gnv~a~~~g~~~-~~~~i~l~~H~DtVp~~--------------g------- 58 (381)
|++|.++++||.++|+++|++ +++++.+|++++++|+.+ +.|+|+|+|||||||.. |
T Consensus 53 ~~~e~~~~~~l~~~l~~~G~~~~~~d~~~nv~a~~~g~~~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~ 132 (434)
T 3ife_A 53 TPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNE 132 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEECTTSCEEEEECCBSSSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEET
T ss_pred CHHHHHHHHHHHHHHHHcCCceEEECCCcEEEEEeCCCCCCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceeccc
Confidence 458999999999999999997 999999999999988653 46999999999999851 1
Q ss_pred -------------------------------CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCc
Q 016853 59 -------------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107 (381)
Q Consensus 59 -------------------------------~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~ 107 (381)
+.|||++++++|+|+++|++.+. .++++|.|+|+++||++ .
T Consensus 133 ~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~--~~~~~i~~if~~~EE~g------~ 204 (434)
T 3ife_A 133 ELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQ--IKHGKIRVAFTPDEEIG------R 204 (434)
T ss_dssp TTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTT--SCBCCEEEEEESCGGGT------C
T ss_pred ccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHhCCC--CCCCCEEEEEECCcccC------h
Confidence 37999999999999999999876 78999999999999985 3
Q ss_pred chHHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecc
Q 016853 108 GSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 187 (381)
Q Consensus 108 Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 187 (381)
|++.+. .+ .+++|.++ ..+++. ...+..+.+|.
T Consensus 205 Ga~~~~------------------~~-----------------~~~~d~~~-----~~d~~~-------~g~i~~~~~G~ 237 (434)
T 3ife_A 205 GPAHFD------------------VE-----------------AFGASFAY-----MMDGGP-------LGGLEYESFNA 237 (434)
T ss_dssp TGGGCC------------------HH-----------------HHCCSEEE-----ECCCCS-------TTEEECCBCEE
T ss_pred HHHHhh------------------hh-----------------hcCCCEEE-----EecCCC-------CCceeecCCCe
Confidence 777542 00 01123222 122211 11366689999
Q ss_pred eEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCc
Q 016853 188 TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASN 267 (381)
Q Consensus 188 ~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~N 267 (381)
.+++|+++|+++|||..| +.|+||+.++++++.+|+.+.. |. .++.+++.+++ + ..|
T Consensus 238 ~~~~i~v~G~~~Hag~~P-~~g~nAi~~aa~~i~~l~~~~~------------------~~--~~~~~~g~i~~-g-~~n 294 (434)
T 3ife_A 238 AGAKLTFNGTNTHPGTAK-NKMRNATKLAMEFNGHLPVEEA------------------PE--YTEGYEGFYHL-L-SLN 294 (434)
T ss_dssp EEEEEEEECBCCCGGGCT-TTCBCHHHHHHHHHHTSCTTCS------------------GG--GCCTTCCEEEE-E-EEE
T ss_pred EEEEEEEEEEecCCCCCc-ccchhHHHHHHHHHHhcccccC------------------CC--cceeeeEEEEe-e-eEe
Confidence 999999999999998559 6899999999999998876421 11 12233445555 2 478
Q ss_pred eeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcC-ceEEEEEeccCCC----ccCCHHHHHHHHHHHHHHHhhcc
Q 016853 268 VIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS-VSCIVERKHDANA----VMCDADLSSQLKSASYAALKRMT 342 (381)
Q Consensus 268 vIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~-~~v~~~~~~~~~~----~~~~~~~~~~l~~a~~~~~g~~~ 342 (381)
+||++|++.+++|+.+.++.++++++|++++++++..++ +++++++...+++ +.+++++++.+.+++++ +|.+
T Consensus 295 ~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~d~~l~~~~~~a~~~-~G~~- 372 (434)
T 3ife_A 295 GDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQMQEKYGQDAVVLEMNDQYYNMLEKIEPVREIVDIAYEAMKS-LNIE- 372 (434)
T ss_dssp ECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHCGGGEEEEEEEEECCTHHHHGGGTHHHHHHHHHHHH-TTCC-
T ss_pred EecCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeecccchhccccCCHHHHHHHHHHHHH-hCCC-
Confidence 999999999999999999999999999999999888888 5566665544444 46888999999999998 5643
Q ss_pred CCCCcccccccCcccHHHHHHhhh-cCeEEEEEee
Q 016853 343 GATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 376 (381)
Q Consensus 343 ~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~~ 376 (381)
+...+++|+||+++|++. +|++++|.+.
T Consensus 373 ------~~~~~~~ggtD~~~~~~~GiP~~~~g~g~ 401 (434)
T 3ife_A 373 ------PNIHPIRGGTDGSQLSYMGLPTPNIFTGG 401 (434)
T ss_dssp ------CEECCBSSCCHHHHHHHTTCCCCEECCSE
T ss_pred ------CEEeecccCchHHHHhhCCCcEEEeCCCC
Confidence 333456799999999988 9998777654
No 12
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.4e-38 Score=308.38 Aligned_cols=299 Identities=17% Similarity=0.202 Sum_probs=227.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE---cCCCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~---~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------------- 57 (381)
+|++|.++++||.++|+++|++++. +..+|+++++ |. ++|+|+|++||||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~ 97 (393)
T 1vgy_A 21 VTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRR-GT--KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLY 97 (393)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEE-CC--CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEE
Confidence 3678889999999999999999887 4567999999 64 36999999999999864
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHH
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~ 135 (381)
|..|||++++++|+|+++|++.+. .++++|.++|+++||.+ +..|++.+... +
T Consensus 98 grG~~D~k~~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~----~~~Ga~~~~~~-------------------~ 152 (393)
T 1vgy_A 98 GRGAADMKTSIACFVTACERFVAKHP--NHQGSIALLITSDEEGD----ALDGTTKVVDV-------------------L 152 (393)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSC----CTTSHHHHHHH-------------------H
T ss_pred ecCcccchHHHHHHHHHHHHHHHhcC--CCCCcEEEEEEeccccC----CcCCHHHHHHH-------------------H
Confidence 334999999999999999998875 78999999999999985 24589887521 1
Q ss_pred HHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 016853 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (381)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~ 215 (381)
...+ ..+|.++ ..+++... ..+ ..+..+.+|..+++|+++|+++|+|. | +.|.||+..
T Consensus 153 ~~~~------------~~~d~~i-----~~e~~~~~-~~g--~~i~~g~~G~~~~~i~v~G~~~Ha~~-P-~~g~nAi~~ 210 (393)
T 1vgy_A 153 KARD------------ELIDYCI-----VGEPTAVD-KLG--DMIKNGRRGSLSGNLTVKGKQGHIAY-P-HLAINPVHT 210 (393)
T ss_dssp HHTT------------CCEEEEE-----ECCCCBSS-STT--SEEECEECEEEEEEEEEECBCEETTC-G-GGCBCHHHH
T ss_pred HhcC------------cCCCEEE-----EeCCCCcc-cCC--ceeEEeeeeEEEEEEEEEccCcccCC-C-ccCCCHHHH
Confidence 1111 1122221 12222110 011 11455789999999999999999997 9 799999999
Q ss_pred HHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCC-CCceeCCeEEEEEEeeCCChhHHHHHHHHH
Q 016853 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPS-ASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (381)
Q Consensus 216 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~-~~NvIP~~a~~~~diR~~p~~~~~~~~~~i 294 (381)
+++++.+|+.+..+.. ++...+++++++.|++ |. +.|+||++|++.+++|+++.++.++++++|
T Consensus 211 ~a~~i~~l~~~~~~~~--------------~~~~~~~~~~v~~i~g-G~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i 275 (393)
T 1vgy_A 211 FAPALLELTQEVWDEG--------------NEYFPPTSFQISNING-GTGATNVIPGELNVKFNFRFSTESTEAGLKQRV 275 (393)
T ss_dssp HHHHHHHHHHCCCCCC--------------CSSCCCCEEEEEEEEE-CCSCTTEECSEEEEEEEEEECTTSCHHHHHHHH
T ss_pred HHHHHHHhhccccccc--------------ccccCCCeEEEeeEcC-CCCCCcccCCeEEEEEEEecCCCCCHHHHHHHH
Confidence 9999999987542210 1222467999999999 65 899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCceEEEEEec-cCCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhh-hcCeEEE
Q 016853 295 SNQLYQICEKRSVSCIVERKH-DANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH-LTKVCSL 372 (381)
Q Consensus 295 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~-~~p~~~~ 372 (381)
+++++. +++++++++.. ..|...+++++++.+.+++++.+|.+ +....++|++|+++|+. .+|++ .
T Consensus 276 ~~~~~~----~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~g~~-------~~~~~~~g~~D~~~~~~~~~P~v-~ 343 (393)
T 1vgy_A 276 HAILDK----HGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIE-------AELSTTGGTSDGRFIKAMAQELI-E 343 (393)
T ss_dssp HHHHHH----TTCCEEEEEEEEECCEECCSSHHHHHHHHHHHHHHSSC-------CEEECCSCCCTHHHHGGGEEEEE-E
T ss_pred HHHHHH----hCCCeEEEEecCCCcccCCCcHHHHHHHHHHHHHcCCC-------ceEecCCccchHHHHHhCCCCEE-E
Confidence 988754 46666666543 33435567889999999999988764 22335678899999998 49964 4
Q ss_pred EEee
Q 016853 373 LCRL 376 (381)
Q Consensus 373 ~~~~ 376 (381)
|.|.
T Consensus 344 ~Gp~ 347 (393)
T 1vgy_A 344 LGPS 347 (393)
T ss_dssp CCSB
T ss_pred ECCC
Confidence 5553
No 13
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=7.8e-38 Score=302.66 Aligned_cols=301 Identities=18% Similarity=0.208 Sum_probs=223.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE---cCCCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~---~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------------- 57 (381)
+|++|.++++||.++|+++|++++. +..+|+++++ |. ++|+|+|.+||||||.+
T Consensus 18 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~ 94 (377)
T 3isz_A 18 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 94 (377)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEE-ES--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEe-CC--CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEE
Confidence 4788999999999999999999874 4567999998 64 36999999999999963
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHH
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~ 135 (381)
|..|||+|++++|.|+++|++.+. .++++|.++|+++||.++ ..|++.+...+
T Consensus 95 g~G~~D~k~g~~~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~~----~~G~~~~~~~~------------------- 149 (377)
T 3isz_A 95 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEATA----KDGTIHVVETL------------------- 149 (377)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----SSSHHHHHHHH-------------------
T ss_pred eCChhhhhHHHHHHHHHHHHHHHhCC--CCCceEEEEEEcccccCc----cccHHHHHHHH-------------------
Confidence 344999999999999999988875 789999999999999863 34898875211
Q ss_pred HHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 016853 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (381)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~ 215 (381)
...+ .++|.++ ..++... ...+ ..+..+.+|..+++|+++|+++|+|. | +.|.||+..
T Consensus 150 ~~~~------------~~~d~~~-----~~e~~~~-~~~g--~~i~~g~~g~~~~~i~~~G~~~Ha~~-p-~~g~nai~~ 207 (377)
T 3isz_A 150 MARD------------EKITYCM-----VGEPSSA-KNLG--DVVKNGRRGSITGNLYIQGIQGHVAY-P-HLAENPIHK 207 (377)
T ss_dssp HHTT------------CCCCEEE-----ECCCCBS-SSTT--SEEEEEECEEEEEEEEEECC---------CGGGCHHHH
T ss_pred HhcC------------CCCCEEE-----EcCCCCc-ccCC--ceEEEEcceEEEEEEEEEccccccCC-C-ccCcCHHHH
Confidence 1111 1123221 1122111 0011 12567899999999999999999997 9 799999999
Q ss_pred HHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCC-CCceeCCeEEEEEEeeCCChhHHHHHHHHH
Q 016853 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPS-ASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (381)
Q Consensus 216 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~-~~NvIP~~a~~~~diR~~p~~~~~~~~~~i 294 (381)
+++++.+|+.+..+.. ++...+++++++.|++ |. +.|+||++|++.+|+|+++.++.+++++++
T Consensus 208 ~~~~i~~l~~~~~~~~--------------~~~~~~~~~~v~~i~g-g~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i 272 (377)
T 3isz_A 208 AALFLQELTTYQWDKG--------------NEFFPPTSLQIANIHA-GTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKV 272 (377)
T ss_dssp HHHHHHHHHHCCCCCC--------------CSSSCCCEEEEEEEEE-CCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHH
T ss_pred HHHHHHHHHhcccccc--------------ccccCCceeEEEEEEC-CCCCCcccCCceEEEEEEecCCCCCHHHHHHHH
Confidence 9999999987632210 1223468999999999 66 899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCceEEEEEeccCCC-ccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEE
Q 016853 295 SNQLYQICEKRSVSCIVERKHDANA-VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLL 373 (381)
Q Consensus 295 ~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~ 373 (381)
+++++. +++++++++....+| ..+++++++.+.+++++++|.+ +....++|+||++++++..+.++.|
T Consensus 273 ~~~~~~----~g~~~~i~~~~~~~p~~~~~~~l~~~l~~a~~~~~g~~-------~~~~~~~g~tDa~~~~~~g~~~v~~ 341 (377)
T 3isz_A 273 AEMLEK----HNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGIT-------PKAETGGGTSDGRFIALMGAEVVEF 341 (377)
T ss_dssp HHHHHH----TTCCEEEEEEECCCCEECCTTHHHHHHHHHHHHHHSCC-------CEEEECSSCCSHHHHHTTTCEEEEC
T ss_pred HHHHHH----cCCCeEEEEEecCCCCcCCCCHHHHHHHHHHHHHhCCC-------CeeeccCcccHHHHHHHcCCCEEEE
Confidence 888753 678888776544444 4567889999999999987754 2334567899999999874444456
Q ss_pred EeeC
Q 016853 374 CRLN 377 (381)
Q Consensus 374 ~~~~ 377 (381)
.|..
T Consensus 342 Gp~~ 345 (377)
T 3isz_A 342 GPLN 345 (377)
T ss_dssp CSBC
T ss_pred CCCC
Confidence 6654
No 14
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3.2e-38 Score=307.44 Aligned_cols=288 Identities=22% Similarity=0.264 Sum_probs=227.1
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcC-----CC-CEEEEecCCCCCCCeEEEeecccCCcCC------------------CCC
Q 016853 5 SVRAGNLIRQWMEDAGLRTWVDH-----LG-NVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIF 60 (381)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~-----~g-nv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------g~~ 60 (381)
+.++++||.++|+++|++++.+. .+ |++++++|.+ .|+|+|++||||||.. |..
T Consensus 41 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~--~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~ 118 (393)
T 1cg2_A 41 IAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG--GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIA 118 (393)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS--CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTT
T ss_pred HHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC--CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcc
Confidence 47899999999999999987765 34 8999998643 4899999999999863 556
Q ss_pred cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCC
Q 016853 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (381)
Q Consensus 61 D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~ 140 (381)
|||++++++|.|+++|++.+. .++++|.++|+++||.+. .|++.+... ...
T Consensus 119 D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~-----~G~~~~~~~------------------~~~---- 169 (393)
T 1cg2_A 119 DDKGGNAVILHTLKLLKEYGV--RDYGTITVLFNTDEEKGS-----FGSRDLIQE------------------EAK---- 169 (393)
T ss_dssp TTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGTT-----TTTHHHHHH------------------HHH----
T ss_pred cchHHHHHHHHHHHHHHhcCC--CCCCCEEEEEEcccccCC-----ccHHHHHHH------------------Hhh----
Confidence 999999999999999999886 677899999999999853 588876520 000
Q ss_pred ChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 016853 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (381)
Q Consensus 141 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i 220 (381)
++|.++ ..+++.. ....+..+.+|..+++|+++|+++|||..| +.|.||+..+++++
T Consensus 170 ------------~~d~~i-----~~e~~~~-----~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p-~~g~nAi~~~~~~i 226 (393)
T 1cg2_A 170 ------------LADYVL-----SFEPTSA-----GDEKLSLGTSGIAYVQVNITGKASHAGAAP-ELGVNALVEASDLV 226 (393)
T ss_dssp ------------HCSEEE-----ECCCEET-----TSCEEESEECEEEEEEEEEECBCEETTSCG-GGSBCHHHHHHHHH
T ss_pred ------------cCCEEE-----EeCCCCC-----CCCcEEEeeeeeEEEEEEEEeeecccCCCc-ccCcCHHHHHHHHH
Confidence 122221 2232210 112356679999999999999999997559 68999999999999
Q ss_pred HHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHH
Q 016853 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (381)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~ 300 (381)
.+|+.+.. |. ..++++++.|++ |.+.|+||++|++.+++|+++.++.++++++|++++++
T Consensus 227 ~~l~~~~~------------------~~-~~~~~~v~~i~g-G~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~ 286 (393)
T 1cg2_A 227 LRTMNIDD------------------KA-KNLRFNWTIAKA-GNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ 286 (393)
T ss_dssp HHHGGGCB------------------TT-TTEEEEEEEEEE-CSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS
T ss_pred HHHHhhhC------------------cc-cCceEEEEEEeC-CCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc
Confidence 99987643 22 367999999999 89999999999999999999999999999999998876
Q ss_pred HHHHcCceEEEEEeccCCCccCC---HHHHHHHHHHHHHHHhhccCCCCccccccc-CcccHHHHHHhhh-cCeEEEEEe
Q 016853 301 ICEKRSVSCIVERKHDANAVMCD---ADLSSQLKSASYAALKRMTGATQHEIPVIM-SGAGHDAMAMSHL-TKVCSLLCR 375 (381)
Q Consensus 301 ~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~-~~g~tD~~~~~~~-~p~~~~~~~ 375 (381)
+..+++++++++...+|++.++ +++++.+.+++++ +|.+ +...+ ++|+||+++|+.. +|+++.|.|
T Consensus 287 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~-------~~~~~~~~g~tD~~~~~~~giP~~~~~G~ 357 (393)
T 1cg2_A 287 -KKLPEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKE-AGGT-------LGVEERTGGGTDAAYAALSGKPVIESLGL 357 (393)
T ss_dssp -CSSTTCEEEEEEEECSCCEECHHHHHHHHHHHHHHHHH-TTCC-------CEEESCBSCCCTHHHHGGGSCCEECCCSC
T ss_pred -ccCCCcEEEEEeccccCCccCCcchHHHHHHHHHHHHH-hCCC-------CccccCCCcccHHHHHHhCCCCEEEeCCC
Confidence 2346788888877778887653 6799999988875 4542 22334 5688999999988 899854544
No 15
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.5e-38 Score=303.23 Aligned_cols=294 Identities=19% Similarity=0.172 Sum_probs=220.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcCC-CCEEEEecCCCCCCCeEEEeecccCCcCC---------------CCCcCh
Q 016853 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHL-GNVHGRVEGLNASAQALLIGSHLDTVVDA---------------GIFDGS 63 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-~~~~~~-gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------g~~D~k 63 (381)
+|++|.++++||.++|+++|++ ++.+.. .|+++++++. ++|+|+|++||||||.+ |..|||
T Consensus 28 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~--~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K 105 (369)
T 3tx8_A 28 PSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRG--LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMK 105 (369)
T ss_dssp BTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCC--CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTH
T ss_pred CCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCC--CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccch
Confidence 4788999999999999999873 444433 4799999765 36999999999999972 555999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCCChh
Q 016853 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (381)
Q Consensus 64 ~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~ 143 (381)
++++++|.|+++|++.+ .++++|.++|+++||.++ ...|++.+..... +
T Consensus 106 ~~~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g~---~~~G~~~~~~~~~----~--------------------- 154 (369)
T 3tx8_A 106 SGLAVYLHTFATLATST---ELKHDLTLIAYECEEVAD---HLNGLGHIRDEHP----E--------------------- 154 (369)
T ss_dssp HHHHHHHHHHHHHTSCT---TCCSEEEEEEECCCSSCT---TSCHHHHHHHHCG----G---------------------
T ss_pred HHHHHHHHHHHHHHhhc---CCCccEEEEEEeccccCc---ccccHHHHHHhcc----c---------------------
Confidence 99999999999998754 689999999999999852 1147777652100 0
Q ss_pred hhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 016853 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (381)
Q Consensus 144 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l 223 (381)
.+++|. .++.|++ ...+..+.+|..+++|+++|+++|+|. | +.|.||+..+++++.+|
T Consensus 155 -------~~~~~~-----~i~~ep~--------~~~i~~~~~G~~~~~i~v~G~~~Ha~~-p-~~g~nAi~~~a~~i~~l 212 (369)
T 3tx8_A 155 -------WLAADL-----ALLGEPT--------GGWIEAGCQGNLRIKVTAHGVRAHSAR-S-WLGDNAMHKLSPIISKV 212 (369)
T ss_dssp -------GGCCSE-----EEECCCC--------TTCEEESBCEEEEEEEEEECBCCBTTS-G-GGSBCTGGGGHHHHHHH
T ss_pred -------ccCCCE-----EEEeCCC--------CCceeeecceEEEEEEEEeeeccccCC-C-CcCcCHHHHHHHHHHHH
Confidence 011221 1455543 124677899999999999999999997 9 79999999999999999
Q ss_pred HHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHH
Q 016853 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~ 303 (381)
+++..+..+ .++....++++++.|++ |.+.|+||++|++.+|+|++|.++.+++.++|+++++..+
T Consensus 213 ~~~~~~~~~------------~~~~~~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~- 278 (369)
T 3tx8_A 213 AAYKAAEVN------------IDGLTYREGLNIVFCES-GVANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG- 278 (369)
T ss_dssp HHCCCCEEE------------ETTEEEECEEEEEEEEE-CSBTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-
T ss_pred Hhhcccccc------------cCCcccCceEEEEEEEC-CCCCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-
Confidence 987543110 01211246899999999 8999999999999999999999999999999999988766
Q ss_pred HcCceEEEEE-eccCCCccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEeeC
Q 016853 304 KRSVSCIVER-KHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRLN 377 (381)
Q Consensus 304 ~~~~~v~~~~-~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~~~ 377 (381)
.++++++++. ...+++. .++++++.+.++ +|.. .+ .+++|+||+++|++. +|++ .|.|+.
T Consensus 279 ~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~g~~------~~--~~~~ggtD~~~~~~~giP~~-~~Gpg~ 340 (369)
T 3tx8_A 279 QDGIEWAVEDGAGGALPG-LGQQVTSGLIDA----VGRE------KI--RAKFGWTDVSRFSAMGIPAL-NFGAGD 340 (369)
T ss_dssp STTEEEEEEEEECCBCCC-TTSHHHHHHHHH----HCGG------GE--EECCSCCTHHHHHTTTCCEE-EECSSC
T ss_pred cCCeEEEEEecCCCCCCC-CCCHHHHHHHHH----cCCC------CC--cccccccchHHHhhCCCCEE-EECCCC
Confidence 5677777743 2233333 455555555544 3431 12 245588999999988 9997 466654
No 16
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=8.5e-36 Score=297.97 Aligned_cols=317 Identities=15% Similarity=0.119 Sum_probs=227.5
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCC-------C-------CEEEEecCCCCCCCeEEEeecccCCcCC------------
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDHL-------G-------NVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~-------g-------nv~a~~~g~~~~~~~i~l~~H~DtVp~~------------ 57 (381)
+|.++++||.++|+++|++++++.. | |+++++++.. ++|+|+|+|||||||.+
T Consensus 51 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a~~~~~~-~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~ 129 (485)
T 3dlj_A 51 ELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSDP-TKGTVCFYGHLDVQPADRGDGWLTDPYVL 129 (485)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEEEECCCT-TSCEEEEEEECCBCCCCGGGTCSSCTTSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEEEECCCC-CCCEEEEEeeecCCCCCCcccCCCCCCcc
Confidence 3789999999999999999876543 2 5999995533 46999999999999852
Q ss_pred ----------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCC
Q 016853 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (381)
Q Consensus 58 ----------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~ 127 (381)
|..|||++++++|.|+++|++.+. .++++|.++|+++||.+. .|++.++.....
T Consensus 130 ~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~-----~g~~~~~~~~~~--------- 193 (485)
T 3dlj_A 130 TEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQ--DLPVNIKFIIEGMEEAGS-----VALEELVEKEKD--------- 193 (485)
T ss_dssp EEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGTT-----TTHHHHHHHHTT---------
T ss_pred EEECCEEEecccccCcHHHHHHHHHHHHHHHhCC--CCCccEEEEEEcccccCC-----ccHHHHHHhhhh---------
Confidence 566999999999999999999986 789999999999999852 588877521000
Q ss_pred CCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCC--CCCCCC
Q 016853 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQG--HAGTVP 205 (381)
Q Consensus 128 g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~--Hs~~~p 205 (381)
++ --++|.++. .| ++. .......+..+.+|..+++|+|+|+++ |+|..
T Consensus 194 -----------~~----------~~~~d~~~~---~~--~~~---~~~~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~~- 243 (485)
T 3dlj_A 194 -----------RF----------FSGVDYIVI---SD--NLW---ISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTF- 243 (485)
T ss_dssp -----------TT----------STTCCEEEE---CC--CBC---CC--CCEEEEEECEEEEEEEEEESCSSCEETTTS-
T ss_pred -----------hc----------ccCCCEEEE---cC--CCc---cCCCCeeEEEeccceEEEEEEEEECCCCCcCCCC-
Confidence 00 001232221 22 110 001122366789999999999999999 99862
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCc-cc-cCCCCCCcc--------cccC--------------------------C
Q 016853 206 MSMRQDPMTAAAELIVLLERLCKHPKDF-LS-YDGRSNCST--------LESL--------------------------S 249 (381)
Q Consensus 206 ~~~g~NAi~~~~~~i~~l~~~~~~~~~~-~~-~~~~~~~~~--------~~p~--------------------------~ 249 (381)
|.||+..++.++..|+.+..+.... .+ +........ .-|+ +
T Consensus 244 ---g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 320 (485)
T 3dlj_A 244 ---GGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLW 320 (485)
T ss_dssp ---TTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHH
T ss_pred ---CccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHh
Confidence 4567777777777776654421000 00 000000000 0000 0
Q ss_pred CCeEEEEEEEEecC----CCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcC--ceEEEEEeccCCCccCC
Q 016853 250 SSLVCTVGEISSWP----SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS--VSCIVERKHDANAVMCD 323 (381)
Q Consensus 250 ~~~ti~~~~i~g~g----~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~ 323 (381)
..++++++.|++ | ++.|+||++|++++++|+.+.++.+.+.++|+++++.++..++ +++++++...+|++.++
T Consensus 321 ~~~~~~v~~i~g-G~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~~~~~pp~~~~ 399 (485)
T 3dlj_A 321 RYPSLSIHGIEG-AFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIAN 399 (485)
T ss_dssp TSCEEEEEEEES-SCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEEEEEECCEECC
T ss_pred cCCceEEEEEec-CCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEEcCCCCceeCC
Confidence 257899999999 7 8999999999999999999999999999999999999988888 48888887778887544
Q ss_pred --HHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHH-HHHhhhcCeEEEEEeeCC
Q 016853 324 --ADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDA-MAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 324 --~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~-~~~~~~~p~~~~~~~~~~ 378 (381)
+++++.+.+++++++|..+ ...+++|++|+ ++|.+.+|.+++|+|..+
T Consensus 400 ~d~~~~~~~~~a~~~~~G~~~-------~~~~~ggs~Dfa~~~~~~~p~~~i~~g~g~ 450 (485)
T 3dlj_A 400 IDDTQYLAAKRAIRTVFGTEP-------DMIRDGSTIPIAKMFQEIVHKSVVLIPLGA 450 (485)
T ss_dssp TTSHHHHHHHHHHHHHHSSCC-------EEEEESSCCHHHHHHHHHTC--CEECCCBC
T ss_pred CCCHHHHHHHHHHHHHhCCCc-------eecCCCCchhHHHHHHHHhCCCEEEecCCC
Confidence 4899999999999887642 22345688896 578777888888888753
No 17
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=1.2e-36 Score=293.24 Aligned_cols=275 Identities=17% Similarity=0.189 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCC-CCCCCeEEEeecccCCcC----------C------CCCcChHH
Q 016853 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGL-NASAQALLIGSHLDTVVD----------A------GIFDGSLG 65 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~-~~~~~~i~l~~H~DtVp~----------~------g~~D~k~g 65 (381)
++|.++++||.++|+++|++++.+. +|+++.++|. ++++|+|+|.+||||||. + |..|||++
T Consensus 26 ~~e~~~~~~l~~~l~~~G~~~~~~~-~~~~~~~~~~~~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~ 104 (364)
T 2rb7_A 26 EQISRCAGFIMDWCAQNGIHAERMD-HDGIPSVMVLPEKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYA 104 (364)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEE-ETTEEEEEECSBTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHH
T ss_pred chHHHHHHHHHHHHHHcCCeEEEec-CCCceEEEEEcCCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHH
Confidence 7899999999999999999987664 7888888752 224689999999999985 2 45699999
Q ss_pred HHHHHHHHHHHHhcCCCCCC---CCC--EEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCC
Q 016853 66 IITAISALKVLKSTGKLGKL---KRP--VEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (381)
Q Consensus 66 iaa~l~a~~~l~~~~~~~~~---~~~--i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~ 140 (381)
++++|.|+++|++.+. .+ +++ |.++|+++||.+ +..|++.++...
T Consensus 105 ~a~~l~a~~~l~~~~~--~~~~~~g~~~v~~~~~~~EE~~----g~~G~~~~~~~~------------------------ 154 (364)
T 2rb7_A 105 VALGLVMFRDRLNALK--AAGRSQKDMALGLLITGDEEIG----GMNGAAKALPLI------------------------ 154 (364)
T ss_dssp HHHHHHHHHHHHHHHH--HTTCCGGGCCEEEEEESCGGGT----STTTHHHHGGGC------------------------
T ss_pred HHHHHHHHHHHHHhCC--CCcccCCCccEEEEEEeccccC----chhhHHHHHhcC------------------------
Confidence 9999999999998764 55 568 999999999974 246888775211
Q ss_pred ChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 016853 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (381)
Q Consensus 141 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i 220 (381)
++| ++ +|++++. +.++.++.+|..+++|+++|+++|+|. | +.|.||+..+++++
T Consensus 155 ------------~~d--~~---i~~d~~~-------p~~i~~~~~G~~~~~i~v~G~~~Ha~~-P-~~g~nAi~~~~~~i 208 (364)
T 2rb7_A 155 ------------RAD--YV---VALDGGN-------PQQVITKEKGIIDIKLTCTGKAAHGAR-P-WMGVNAVDLLMEDY 208 (364)
T ss_dssp ------------EEE--EE---EECSSSB-------TTEEEEEECEEEEEEEEEECBCEETTS-G-GGSBCHHHHHHHHH
T ss_pred ------------CCC--EE---EEccCCc-------ccceEEEeeeEEEEEEEEEeecccCCC-C-CCCcCHHHHHHHHH
Confidence 011 11 4544332 223677899999999999999999998 9 68999999999999
Q ss_pred HHHHHHhcCCCCccccCCCCCCcccccCC--CCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHH
Q 016853 221 VLLERLCKHPKDFLSYDGRSNCSTLESLS--SSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQL 298 (381)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~ 298 (381)
.+|+.+.. ++.. +.++++++.|++ |.+.|+||++|++.+|+|+++.++.++++++|++++
T Consensus 209 ~~l~~~~~-----------------~~~~~~~~~~~~vg~i~g-G~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~ 270 (364)
T 2rb7_A 209 TRLKTLFA-----------------EENEDHWHRTVNLGRIRA-GESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTV 270 (364)
T ss_dssp HHHHTTSC-----------------CCCTTCCSCEEEEEEEEE-CSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHC
T ss_pred HHHHhhcc-----------------chhhcCCCceEEEEEEec-CCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHh
Confidence 99987621 1222 367999999999 899999999999999999999999999999999877
Q ss_pred HHHHHHcCceEEEEEeccCCCcc--CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhh-hcCeEEEEEe
Q 016853 299 YQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH-LTKVCSLLCR 375 (381)
Q Consensus 299 ~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~~ 375 (381)
+. +++ ...++++. .++++++.+.++++ .+|. +++|++|+++|++ .+|++. |.|
T Consensus 271 ~~-------~v~---~~~~~~~~~~~~~~l~~~~~~~~~-~~g~------------~~~g~~D~~~~~~~~~p~v~-~Gp 326 (364)
T 2rb7_A 271 SG-------TVS---IVRTVPVFLAADSPYTERLLALSG-ATAG------------KAHGASDARYLGENGLTGVV-WGA 326 (364)
T ss_dssp SS-------EEE---EEEEECCEECCCCHHHHHHHHHHC-CEEE------------EESSCCGGGGTGGGTCCEEE-CCC
T ss_pred hh-------hEE---eccCCccccCCCCHHHHHHHHHHH-hcCC------------CCCCCchHHHHHhcCCCEEE-ECC
Confidence 53 343 22334433 46678888887776 4321 1347899999998 499875 555
Q ss_pred e
Q 016853 376 L 376 (381)
Q Consensus 376 ~ 376 (381)
.
T Consensus 327 ~ 327 (364)
T 2rb7_A 327 E 327 (364)
T ss_dssp C
T ss_pred C
Confidence 4
No 18
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=2.5e-36 Score=291.74 Aligned_cols=277 Identities=16% Similarity=0.065 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCC----CCEEEEecCCCCCCCeEEEeecccCCcCC--------------------CC
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDHL----GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GI 59 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~----gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------------g~ 59 (381)
+|.++++||.++|+ ||+++.+.. +|+++ ++|. |+|+|.+||||||.+ |.
T Consensus 32 ~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~----~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~ 104 (369)
T 2f7v_A 32 AEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT----PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGV 104 (369)
T ss_dssp SSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC----CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTT
T ss_pred cHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC----CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEeccc
Confidence 89999999999999 999887754 58999 8763 789999999999864 45
Q ss_pred CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCC
Q 016853 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (381)
Q Consensus 60 ~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g 139 (381)
.|||+|++++|+++++ ++++|.++|+++||.+ |..|++.++...
T Consensus 105 ~D~k~g~a~~l~a~~~---------~~~~v~~~~~~~EE~~----g~~G~~~~~~~~----------------------- 148 (369)
T 2f7v_A 105 CDIKGAAAALVAAANA---------GDGDAAFLFSSDEEAN----DPRCIAAFLARG----------------------- 148 (369)
T ss_dssp TTTHHHHHHHHHHHTT---------CCCCEEEEEESCTTSS----SCCHHHHHHTTC-----------------------
T ss_pred ccccHHHHHHHHHHhc---------CCCCEEEEEEeCcccC----CCcCHHHHHhcC-----------------------
Confidence 6999999999999764 3689999999999983 246898876210
Q ss_pred CChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCC-CCCCHHHHHHH
Q 016853 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAE 218 (381)
Q Consensus 140 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~-~g~NAi~~~~~ 218 (381)
.++|.++ ..+++ ...+..+.+|..+++|+++|+++|+|. | + .|.||+..+++
T Consensus 149 ------------~~~d~~i-----~~e~~--------~~~i~~~~~g~~~~~i~v~G~~~Ha~~-p-~~~g~nAi~~~~~ 201 (369)
T 2f7v_A 149 ------------LPYDAVL-----VAEPT--------MSEAVLAHRGISSVLMRFAGRAGHASG-K-QDPAASALHQAMR 201 (369)
T ss_dssp ------------CCCSEEE-----ECCCS--------TTCBBCCBCCEEEEEEEEECCCC--------CTTSCHHHHHHH
T ss_pred ------------CCCCEEE-----ECCCC--------CCcceeecCceEEEEEEEeeeCcccCC-C-CcCCCCHHHHHHH
Confidence 0122221 22322 123455799999999999999999996 9 6 89999999999
Q ss_pred HHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHH
Q 016853 219 LIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQL 298 (381)
Q Consensus 219 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~ 298 (381)
++.+|+.+..+..+ .. .+|..+ ++++++.|++ |.+.|+||++|++.+++|+++.++.++++++|++++
T Consensus 202 ~i~~l~~~~~~~~~------~~----~~~~~~-~~~~vg~i~g-G~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~ 269 (369)
T 2f7v_A 202 WGGKALDHVESLAH------AR----FGGLTG-LRFNIGRVDG-GIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFA 269 (369)
T ss_dssp HHHHHHHHHHHTTT------CE----ETTEES-CEEEEEEEEE-CSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTC
T ss_pred HHHHHHhhhhhhcc------cc----cCcccC-CceEEEEeec-CCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHH
Confidence 99999887542100 00 013222 6999999999 899999999999999999999999999999998877
Q ss_pred HHHHHHcCceEEEEEe-ccCCCccCC-HHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEe
Q 016853 299 YQICEKRSVSCIVERK-HDANAVMCD-ADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCR 375 (381)
Q Consensus 299 ~~~~~~~~~~v~~~~~-~~~~~~~~~-~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~ 375 (381)
+.. ++++++++. ..+|++.++ +++++.+.+++++.+|.++ . ..++|+||+++|++. +|++ .|.|
T Consensus 270 ~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~~-------~-~~~~g~~D~~~~~~~g~p~v-~~Gp 336 (369)
T 2f7v_A 270 DPA----AAHFEETFRGPSLPSGDIARAEERRLAARDVADALDLPI-------G-NAVDFWTEASLFSAGGYTAL-VYGP 336 (369)
T ss_dssp SSC----CSEEEEEEEECCBSCSSHHHHHHHHHHHHHHHHHTTCCB-------C-CCBSSCCTHHHHHHTTCCEE-ECCS
T ss_pred HHh----cCceEEEeccCCCCccCCCCCHHHHHHHHHHHHhhCCCC-------C-ccccccCcHHHHhhCCCCEE-EECC
Confidence 543 467777765 367887766 8899999999999877542 1 235688999999998 9988 5555
No 19
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=1.5e-35 Score=295.77 Aligned_cols=314 Identities=16% Similarity=0.088 Sum_probs=229.1
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCC--------------CCEEEEecCCCCCCCeEEEeecccCCcCC------------
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDHL--------------GNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~--------------gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------ 57 (381)
+|.++++||.++|+++|++++++.. +|+++++++.. ++|+|+|+|||||||.+
T Consensus 44 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~-~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~ 122 (479)
T 2zog_A 44 EIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDP-QKKTVCIYGHLDVQPAALEDGWDSEPFTL 122 (479)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCCT-TSCEEEEEEECCBCCCCGGGTCSSCTTSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCCC-CCCeEEEEEecCCCCCCccccCcCCCCcc
Confidence 5689999999999999999887653 78999996543 46999999999999862
Q ss_pred ----------CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCC
Q 016853 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (381)
Q Consensus 58 ----------g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~ 127 (381)
|++|||++++++|.|+++|++.+. .++++|.++|+++||.+ ..|++.++.......+
T Consensus 123 ~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~~~~~~~------ 189 (479)
T 2zog_A 123 VEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ--EIPVNLRFCLEGMEESG-----SEGLDELIFAQKDKFF------ 189 (479)
T ss_dssp EEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGT-----CTTHHHHHHHTTTTTT------
T ss_pred eeECCEEEeeccccChHHHHHHHHHHHHHHHhCC--CCCCcEEEEEecccccC-----CccHHHHHHhhhhhhc------
Confidence 458999999999999999999886 78899999999999985 3688887631110000
Q ss_pred CCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecC--CCCCCCC
Q 016853 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTVP 205 (381)
Q Consensus 128 g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~--~Hs~~~p 205 (381)
.++|.+ +..+++.. ......++.+++|..+++|+++|++ +|||. |
T Consensus 190 ------------------------~~~d~~-----i~~e~~~~---~~~~~~i~~~~~G~~~~~i~v~G~~~~~Hs~~-~ 236 (479)
T 2zog_A 190 ------------------------KDVDYV-----CISDNYWL---GKNKPCITYGLRGICYFFIEVECSDKDLHSGV-Y 236 (479)
T ss_dssp ------------------------TTCCEE-----EECCCBCS---SSSSCEEEEEECEEEEEEEEEECCSSCEEHHH-H
T ss_pred ------------------------ccCCEE-----EEeCCCcC---CCCCeEEEEecceEEEEEEEEEeCCCCCccCC-C
Confidence 012222 12233211 0113347779999999999999999 99987 4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCc-cc-cCCCCC-----------Cccccc------------C-----------C
Q 016853 206 MSMRQDPMTAAAELIVLLERLCKHPKDF-LS-YDGRSN-----------CSTLES------------L-----------S 249 (381)
Q Consensus 206 ~~~g~NAi~~~~~~i~~l~~~~~~~~~~-~~-~~~~~~-----------~~~~~p------------~-----------~ 249 (381)
|.||+..+++++..|+.+..+.... .+ +..... ....+| . .
T Consensus 237 ---g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 313 (479)
T 2zog_A 237 ---GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRW 313 (479)
T ss_dssp ---TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHH
T ss_pred ---CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhh
Confidence 5899999999999987765431000 00 000000 000000 0 0
Q ss_pred CCeEEEEEEEEecC----CCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHc--CceEEEEEeccCCCcc--
Q 016853 250 SSLVCTVGEISSWP----SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKR--SVSCIVERKHDANAVM-- 321 (381)
Q Consensus 250 ~~~ti~~~~i~g~g----~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~--~~~v~~~~~~~~~~~~-- 321 (381)
..++++++.|++ | .+.|+||++|++.+++|+.|+++.++++++|+++++.++..+ +.++++++...+|++.
T Consensus 314 ~~~~~~v~~i~g-g~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 392 (479)
T 2zog_A 314 RYPSLSLHGIEG-AFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSD 392 (479)
T ss_dssp TSCEEEEEEEES-SCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEECCEECC
T ss_pred cCCCeEEeeeec-CCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEecCCCCceecC
Confidence 146899999998 6 799999999999999999999999999999999999887665 5677777666667643
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHH-HHHhhh--cCeEEEEEe
Q 016853 322 CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDA-MAMSHL--TKVCSLLCR 375 (381)
Q Consensus 322 ~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~-~~~~~~--~p~~~~~~~ 375 (381)
.++++++.+.+++++.+|..| ...+++|++|+ ++|.+. +|+++++++
T Consensus 393 ~d~~~~~~~~~a~~~~~g~~~-------~~~~~~gs~d~~~~~~~~~~~p~~~~g~g 442 (479)
T 2zog_A 393 FNHPHYQAGRRALKTVFGVEP-------DLTREGGSIPVTLTFQEATGKNVMLLPVG 442 (479)
T ss_dssp TTSHHHHHHHHHHHHHHSSCC-------EEEEESSCCTHHHHHHHHHCSEEEECCCB
T ss_pred CCCHHHHHHHHHHHHHhCCCc-------eecCCCCccchHHHHHHHhCCCEEEecCC
Confidence 578899999999999887642 22345688998 577764 888765343
No 20
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=6.8e-36 Score=287.27 Aligned_cols=276 Identities=17% Similarity=0.158 Sum_probs=212.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------CCC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIF 60 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------------------g~~ 60 (381)
+|++|.++++||.++|+++|++++.+ .+|++++++|+.+++|+|+|.+||||||.+ |..
T Consensus 26 ~s~~e~~~~~~l~~~l~~~g~~~~~~-~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~ 104 (356)
T 3ct9_A 26 ISREETQAADFLQNYIEAEGMQTGRK-GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSN 104 (356)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCCEEEE-TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTT
T ss_pred CCCChHHHHHHHHHHHHHCCCeEEEE-eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcc
Confidence 36789999999999999999998877 789999998732246899999999999863 334
Q ss_pred cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCCC
Q 016853 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (381)
Q Consensus 61 D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~ 140 (381)
|||++++++|.|+++|++.+ ++++|.++|+++||.+ |..|++.++...
T Consensus 105 D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~~----g~~G~~~~~~~~------------------------ 152 (356)
T 3ct9_A 105 DAGASVVSLLQVFLQLCRTS----QNYNLIYLASCEEEVS----GKEGIESVLPGL------------------------ 152 (356)
T ss_dssp TTHHHHHHHHHHHHHHTTSC----CSSEEEEEEECCGGGT----CTTTHHHHGGGS------------------------
T ss_pred cchHHHHHHHHHHHHHHhcC----CCCCEEEEEEeCcccC----CccCHHHHHhhC------------------------
Confidence 99999999999999999874 6799999999999982 246898875211
Q ss_pred ChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 016853 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (381)
Q Consensus 141 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i 220 (381)
.++| ++ ++.+++ . ..+..+.+|..+++|+++|+++|+|. | .|.||+..+++++
T Consensus 153 -----------~~~d--~~---i~~ep~------~--~~i~~~~~G~~~~~i~~~G~~~Ha~~-p--~g~nAi~~~~~~i 205 (356)
T 3ct9_A 153 -----------PPVS--FA---IVGEPT------E--MQPAIAEKGLMVLDVTATGKAGHAAR-D--EGDNAIYKVLNDI 205 (356)
T ss_dssp -----------CCCS--EE---EECCSB------T--TCCEEEECCCEEEEEEEECBCCBTTS-S--CCBCTTGGGHHHH
T ss_pred -----------CCCC--EE---EEcCCC------C--ceEEEeeeEEEEEEEEEECCCcccCC-C--CCCCHHHHHHHHH
Confidence 0122 11 344432 1 22556799999999999999999998 8 6899999999999
Q ss_pred HHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHH
Q 016853 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (381)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~ 300 (381)
.+|+.+..+. .+|..++++++++.|++ |.+.|+||++|++.+++|+.+.++.++++++|+++++.
T Consensus 206 ~~l~~~~~~~--------------~~~~~~~~~~~vg~i~g-G~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~ 270 (356)
T 3ct9_A 206 AWFRDYRFEK--------------ESPLLGPVKMSVTVINA-GTQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC 270 (356)
T ss_dssp HHHHHCCCSC--------------CBTTTBSCEEEEEEEEE-CSSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS
T ss_pred HHHHhhhccc--------------ccccCCCCcEEeeEEec-CCcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC
Confidence 9998865432 12433567999999999 89999999999999999999999999999999987743
Q ss_pred HHHHcCceEEEEEeccCCCcc--CCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEee
Q 016853 301 ICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRL 376 (381)
Q Consensus 301 ~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~ 376 (381)
++++++ ..+|++. +++++++.+.+++++ +. .++++||++. ..+|++ .|.|+
T Consensus 271 -------~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~------------~~--~~~g~tD~~~--~~~p~v-~~G~g 323 (356)
T 3ct9_A 271 -------DAKARS-FRLNSSRIDEKHPFVQKAVKMGRI------------PF--GSPTLSDQAL--MSFASV-KIGPG 323 (356)
T ss_dssp -------EEEESC-SCSCCEECCTTSHHHHHHHHTTCC------------CE--EECSCCGGGG--CCSCEE-ECCSS
T ss_pred -------eEEEee-ccCCCCCCCCCCHHHHHHHHHhcC------------Cc--ccccccchhh--cCCCEE-EECCC
Confidence 444432 4566643 667788776655431 11 2458899983 248986 45443
No 21
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=1.8e-35 Score=295.41 Aligned_cols=312 Identities=13% Similarity=0.048 Sum_probs=221.0
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcC---CCCEEEEecCCCCCCCeEEEeecccCCcCC----------------------CC
Q 016853 5 SVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GI 59 (381)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~---~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~----------------------g~ 59 (381)
|.++++||.++|+++|++++++. .+|++++++|..+++|+|+|+|||||||.+ |+
T Consensus 66 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~ 145 (481)
T 2pok_A 66 LKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGV 145 (481)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTT
T ss_pred HHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEcccc
Confidence 48999999999999999988764 478999998653356999999999999863 45
Q ss_pred CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHHHHHCC
Q 016853 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (381)
Q Consensus 60 ~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g 139 (381)
.|||++++++|.|+++|++.+. .++++|.++|+++||.+ ..|++.++.. ...
T Consensus 146 ~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~g~~~~~~~------------------~~~--- 197 (481)
T 2pok_A 146 DDDKGHITARLSALRKYMQHHD--DLPVNISFIMEGAEESA-----STDLDKYLEK------------------HAD--- 197 (481)
T ss_dssp TTTHHHHHHHHHHHHHHHHTCS--SCSSEEEEEEESCGGGT-----TTTHHHHHHH------------------HHH---
T ss_pred ccCcHHHHHHHHHHHHHHHhcC--CCCCCEEEEEecccccC-----chhHHHHHHH------------------hHh---
Confidence 7999999999999999998854 68899999999999985 3577766410 000
Q ss_pred CChhhhhhhhccCC-CccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEecC--CCCCCCCCCCCCCHHHHH
Q 016853 140 IDIAEESLLQLKYD-PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTVPMSMRQDPMTAA 216 (381)
Q Consensus 140 ~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~--~Hs~~~p~~~g~NAi~~~ 216 (381)
.++ +|.++ ..+++.. ......+..+.+|..+++|+++|++ +||+. | +.|.||+..+
T Consensus 198 -----------~~~~~d~~i-----~~~~~~~---~~~~~~i~~~~~G~~~~~i~v~G~~g~~Hss~-p-~~g~nAi~~~ 256 (481)
T 2pok_A 198 -----------KLRGADLLV-----WEQGTKN---ALEQLEISGGNKGIVTFDAKVKSADVDIHSSY-G-GVVESAPWYL 256 (481)
T ss_dssp -----------HHTTCSEEE-----CSCCBBC---TTSCEEEECCBCEEEEEEEEEECSSSCEEGGG-T-TTBCCHHHHH
T ss_pred -----------hccCCCEEE-----ECCCCcc---CCCCeeEEEecceeEEEEEEEecCCCCccccC-C-CCCCCHHHHH
Confidence 011 22221 1222111 1112346668999999999999999 89976 9 6899999999
Q ss_pred HHHHHHHHHHhcCC-CC----c--------------ccc-CCC--------CC----CcccccC---CCCeEEEEEEEEe
Q 016853 217 AELIVLLERLCKHP-KD----F--------------LSY-DGR--------SN----CSTLESL---SSSLVCTVGEISS 261 (381)
Q Consensus 217 ~~~i~~l~~~~~~~-~~----~--------------~~~-~~~--------~~----~~~~~p~---~~~~ti~~~~i~g 261 (381)
++++.+|+.+..+. ++ . +++ +.+ .. ....+|. ...+++|++.|++
T Consensus 257 a~~i~~l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~g 336 (481)
T 2pok_A 257 LQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQS 336 (481)
T ss_dssp HHHHHHTBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEE
T ss_pred HHHHHHhhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeec
Confidence 99999887542100 00 0 000 000 00 0000000 1247999999999
Q ss_pred cCC----CCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCcc--CCHHHHHHHHHHHH
Q 016853 262 WPS----ASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASY 335 (381)
Q Consensus 262 ~g~----~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~l~~a~~ 335 (381)
|. +.|+||++|++.+++|++|.++.+.++++|+++++..+. .++++++. ..+|++. .++++++.+.++++
T Consensus 337 -G~~~~~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~~--~~~p~~~~~~d~~l~~~~~~a~~ 412 (481)
T 2pok_A 337 -GYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVELYYT--LGEMSYRSDMSAPAILNVIELAK 412 (481)
T ss_dssp -ECCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEEEEE--EEECCBCCCSCSHHHHHHHHHHT
T ss_pred -CCCCCCCCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEEEEc--cCCCcccCCCCCHHHHHHHHHHH
Confidence 54 789999999999999999999999999999999977643 46666554 3455543 58889999999998
Q ss_pred HHHhhccCCCCcccccccCcccHHHHHHhhh--cCeEEEEEee
Q 016853 336 AALKRMTGATQHEIPVIMSGAGHDAMAMSHL--TKVCSLLCRL 376 (381)
Q Consensus 336 ~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~~~ 376 (381)
+.+|..+ ......+|++|+++|++. +|+++ |.|+
T Consensus 413 ~~~g~~~------~~~~~~gg~~D~~~~~~~~g~p~v~-~G~g 448 (481)
T 2pok_A 413 KFYPQGV------SVLPTTAGTGPMHTVFDALEVPMVA-FGLG 448 (481)
T ss_dssp TTCTTCE------EEESCBSSCCTHHHHHHHHCCCEEB-CCSB
T ss_pred HHcCCCc------cccccCCCCCchHHHHHHcCCCEEE-ecCC
Confidence 8777542 122234455599999875 88864 4444
No 22
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=2.6e-35 Score=289.13 Aligned_cols=284 Identities=15% Similarity=0.123 Sum_probs=219.6
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcCCCCEEEEecCCCC-CCCeEEEeecccCCcCC--------------C--------
Q 016853 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------G-------- 58 (381)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-~~~~~~gnv~a~~~g~~~-~~~~i~l~~H~DtVp~~--------------g-------- 58 (381)
.+|.++++||.++|+++|++ ++++..+|++++++|..+ ++|+|+|.|||||||.+ |
T Consensus 29 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~g~~~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g 108 (417)
T 1fno_A 29 EGQWKLLRLLKQQLEEMGLVNITLSEKGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIG 108 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECTTCCEEEEECCSSCSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSS
T ss_pred ccHHHHHHHHHHHHHHcCCCeEEECCCceEEEEECCCCCCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeeccccc
Confidence 48999999999999999999 888888999999987542 36899999999999753 2
Q ss_pred -----------------------------CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcch
Q 016853 59 -----------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGS 109 (381)
Q Consensus 59 -----------------------------~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs 109 (381)
++|||++++++|.|+++|++.+ .++++|.++|+++||.+ .|+
T Consensus 109 ~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g------~Ga 179 (417)
T 1fno_A 109 DEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP---IPHGDIKVAFTPDEEVG------KGA 179 (417)
T ss_dssp SCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS---CCCCCEEEEEESCGGGT------CTT
T ss_pred ccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC---CCCCcEEEEEEeccccC------CCh
Confidence 1899999999999999999886 47899999999999984 377
Q ss_pred HHHhccCCccccccccCCCCcHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceE
Q 016853 110 AALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTR 189 (381)
Q Consensus 110 ~~l~~~l~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 189 (381)
+.+.. +. +.+|.. +++++++ . ..+..+.+|..+
T Consensus 180 ~~~~~------------------~~-----------------~~~d~~-----i~~d~~~----~---g~i~~~~~g~~~ 212 (417)
T 1fno_A 180 KHFDV------------------EA-----------------FGAQWA-----YTVDGGG----V---GELEFENFNAAS 212 (417)
T ss_dssp TTCCH------------------HH-----------------HCCSEE-----EECCCCS----T---TBEECCBCEEEE
T ss_pred hhhch------------------hh-----------------cCCCEE-----EEeCCCC----c---CeeEEecCCcee
Confidence 65420 00 112221 2333321 1 124567899999
Q ss_pred EEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCcee
Q 016853 190 LKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVI 269 (381)
Q Consensus 190 ~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvI 269 (381)
++|+++|+++|+|..| +.|.||+..+++++.+|+.+..+. ++.....+++++.|++ |
T Consensus 213 ~~i~~~G~~~Hs~~~p-~~g~nAi~~~a~~i~~l~~~~~~~---------------~~~~~~~~~~v~~i~g-G------ 269 (417)
T 1fno_A 213 VNIKIVGNNVHPGTAK-GVMVNALSLAARIHAEVPADEAPE---------------TTEGYEGFYHLASMKG-T------ 269 (417)
T ss_dssp EEEEEECBCCCGGGCT-TTCBCHHHHHHHHHHTSCTTSSGG---------------GCCTTCCEEEEEEEEE-C------
T ss_pred EEEEEEeeccCCCCCc-cccCCHHHHHHHHHHhhhccCCcc---------------cccccccEEEEEEEee-c------
Confidence 9999999999999558 689999999999999887653211 1112356899999999 5
Q ss_pred CCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCce--EEEEEeccCCC----ccCCHHHHHHHHHHHHHHHhhccC
Q 016853 270 PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVS--CIVERKHDANA----VMCDADLSSQLKSASYAALKRMTG 343 (381)
Q Consensus 270 P~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~--v~~~~~~~~~~----~~~~~~~~~~l~~a~~~~~g~~~~ 343 (381)
|++|++.+++|+.+.++.+.+.++|+++++.++..++.. +++++...+++ +.+++++++.+.+++++ +|.+
T Consensus 270 p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~-- 346 (417)
T 1fno_A 270 VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRD-CHIT-- 346 (417)
T ss_dssp SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTTTCCTTCCEEEEEEEEECCCHHHHHTSTHHHHHHHHHHHH-TTCC--
T ss_pred cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEeccccchhccccCCCHHHHHHHHHHHH-cCCC--
Confidence 999999999999999999999999999999887766643 55555444443 35788999999999998 5643
Q ss_pred CCCcccccccCcccHHHHHHhhh-cCeEEEE
Q 016853 344 ATQHEIPVIMSGAGHDAMAMSHL-TKVCSLL 373 (381)
Q Consensus 344 ~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~ 373 (381)
+...+++|+||+++|+.. +|++.++
T Consensus 347 -----~~~~~~~ggtD~~~~~~~gip~v~~G 372 (417)
T 1fno_A 347 -----PEMKPIRGGTDGAQLSFMGLPCPNLF 372 (417)
T ss_dssp -----CBCCCBSSCCHHHHHTTTTCCCCEEC
T ss_pred -----ceeccceeccchHhHHhcCCCEEEEc
Confidence 223356689999999987 9998643
No 23
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=8.3e-35 Score=289.79 Aligned_cols=308 Identities=15% Similarity=0.105 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHHHHHcCCE---EEEcC----CCCEEEEecCCCCCCCeEEEeecccCCcCC-------------------
Q 016853 4 ASVRAGNLIRQWMEDAGLR---TWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~---~~~~~----~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------------- 57 (381)
+|.++++||.++|+++||+ +++.+ ..|++++++| . ++|+|+|+|||||||..
T Consensus 46 ~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~g-~-~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~ 123 (472)
T 3pfe_A 46 YMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPG-Q-IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLL 123 (472)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEECC-S-EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEE
T ss_pred hHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEcC-C-CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEE
Confidence 4899999999999999984 54332 3589999987 3 46999999999999851
Q ss_pred ---CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccccccCCCCcHHHH
Q 016853 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (381)
Q Consensus 58 ---g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~~~d~~g~~~~~~ 134 (381)
|..|||++++++|.|+++|++.+. .++ +|.|+|+++||.++ .|++.++.. .
T Consensus 124 ~grG~~D~K~~~a~~l~a~~~l~~~~~--~~~-~v~~~~~~~EE~g~-----~g~~~~~~~------------------~ 177 (472)
T 3pfe_A 124 YGRGGADDGYSAYASLTAIRALEQQGL--PYP-RCILIIEACEESGS-----YDLPFYIEL------------------L 177 (472)
T ss_dssp ESTTCCCCCHHHHHHHHHHHHHHHTTC--CCE-EEEEEEESCGGGTS-----TTHHHHHHH------------------H
T ss_pred EEeCcccCcHHHHHHHHHHHHHHHcCC--CCC-cEEEEEEeCCCCCC-----hhHHHHHHH------------------h
Confidence 455999999999999999999985 555 99999999999853 588877521 1
Q ss_pred HHHCCCChhhhhhhhccC-CCccchheeeecccCCcccccCCCcceEEEeeecceEEEEE--EEecCCCCCCCCCCCC-C
Q 016853 135 LRENSIDIAEESLLQLKY-DPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVT--VRGSQGHAGTVPMSMR-Q 210 (381)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~--v~G~~~Hs~~~p~~~g-~ 210 (381)
.. .+ ++|.++. .| ++. .......+..|.+|..+++++ ++|+++|+|. | ... .
T Consensus 178 ~~--------------~~~~~d~~~~---~~--~~~---~~~~~~~i~~g~~G~~~~~~~v~~~G~~~H~~~-~-~~~~~ 233 (472)
T 3pfe_A 178 KE--------------RIGKPSLVIC---LD--SGA---GNYEQLWMTTSLRGNLVGKLTVELINEGVHSGS-A-SGIVA 233 (472)
T ss_dssp HH--------------HHCCCSEEEE---EC--CBC---SCSSSCEEEEEECEEEEEEEEEESCSSCBCHHH-H-TTTSC
T ss_pred Hh--------------hccCCCEEEE---eC--CCc---CCCCCeeEEEeeeEEEEEEEEEEeCCCCcccCC-C-CCCCC
Confidence 00 01 2333322 23 111 011223577889999988854 5899999998 7 443 5
Q ss_pred CHHHHHHHHHHHHHHHh-cCC-----CCc-----------------------cccCCCCCCcccccCCC-----------
Q 016853 211 DPMTAAAELIVLLERLC-KHP-----KDF-----------------------LSYDGRSNCSTLESLSS----------- 250 (381)
Q Consensus 211 NAi~~~~~~i~~l~~~~-~~~-----~~~-----------------------~~~~~~~~~~~~~p~~~----------- 250 (381)
||+..+++++.+|+++. .+. ++. ++++... ++..+
T Consensus 234 nai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 308 (472)
T 3pfe_A 234 DSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSA-----KPVIQDKQQLILNRTW 308 (472)
T ss_dssp CHHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTC-----CCSCSCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCc-----cccccchHHHHHHhhc
Confidence 99999999999998763 110 000 0000000 11111
Q ss_pred CeEEEEEEEEec---CCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEec-cCCCcc---CC
Q 016853 251 SLVCTVGEISSW---PSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKH-DANAVM---CD 323 (381)
Q Consensus 251 ~~ti~~~~i~g~---g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~-~~~~~~---~~ 323 (381)
.+|+|++.|+++ |++.|+||++|++++++|+.+.++.+.+.++|+++++.++ .++++++++... .+|++. ++
T Consensus 309 ~~tl~i~~i~gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v~~~~~~~pp~~~~~n~ 387 (472)
T 3pfe_A 309 RPALTVTGADGFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDFKIQNGGSKGWNAPLLS 387 (472)
T ss_dssp SCEEEEEEEESCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEEEECSCCBCCEECCCCC
T ss_pred CCcEEEeeeecCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEEEecCCCCCcccCCCCC
Confidence 479999999993 2799999999999999999999999999999999998765 578889888876 777765 34
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCcccccccCcccHH-H-HHHhhhcCeE-EEEEeeC
Q 016853 324 ADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHD-A-MAMSHLTKVC-SLLCRLN 377 (381)
Q Consensus 324 ~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD-~-~~~~~~~p~~-~~~~~~~ 377 (381)
+.+++.+.+++++++|.++ ....+ |++| + ++|.+.+|.+ ++|+|.+
T Consensus 388 ~~l~~~~~~a~~~~~G~~~-------~~~~~-gg~d~f~~~~~~~~Pg~p~v~~G~g 436 (472)
T 3pfe_A 388 DWLAKAASEASMTYYDKPA-------AYMGE-GGTIPFMSMLGEQFPKAQFMITGVL 436 (472)
T ss_dssp HHHHHHHHHHHHHHHSSCC-------EEEEE-SSCCHHHHHHHHHCTTCEEEEECCB
T ss_pred hHHHHHHHHHHHHHcCCCc-------eeccC-CCchhhHHHHHHHcCCCCEEEecCC
Confidence 5688999999999888642 12223 5566 4 6677778876 7777753
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=1.6e-33 Score=281.74 Aligned_cols=289 Identities=17% Similarity=0.201 Sum_probs=213.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCC--CCCCeEEEeecccCCcCCC--------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDAG-------------------- 58 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~--~~~~~i~l~~H~DtVp~~g-------------------- 58 (381)
+|++|.++++||.++|+++|++++.+..+|++++++|+. +++|+|+|.+||||||.++
T Consensus 26 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~ 105 (487)
T 2qyv_A 26 PSYKEEQLAQFIINWAKTKGFFAERDEVGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDW 105 (487)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSE
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCE
Confidence 367899999999999999999999888899999998741 3468999999999999642
Q ss_pred ----CC----cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhc-cCCccccccccCCCC
Q 016853 59 ----IF----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG-ILPVSALRVSDKSGV 129 (381)
Q Consensus 59 ----~~----D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~-~l~~~~~~~~d~~g~ 129 (381)
++ |||+|++++|++++ +.+ .++++|.++|+++||.+ ..|++.+.. .+.
T Consensus 106 l~g~G~~lgaD~k~g~a~~l~a~~---~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~~~~------------ 162 (487)
T 2qyv_A 106 VKAKGTTLGADNGIGMASALAVLE---SND---IAHPELEVLLTMTEERG-----MEGAIGLRPNWLR------------ 162 (487)
T ss_dssp EEETTBCCCHHHHHHHHHHHHHHH---CSS---SCCSSEEEEEESCTTTT-----CHHHHTCCSSCCC------------
T ss_pred EEeCCCCcCCcCHHHHHHHHHHHH---hCC---CCCCCEEEEEEeccccC-----CHHHHHHHHhccC------------
Confidence 23 99999999999875 334 47899999999999974 368887652 111
Q ss_pred cHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcc--c--ccCC-------CcceEEEeeecceEEEEEEEe-c
Q 016853 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPV--L--EWVG-------FPLGVVQGIAGQTRLKVTVRG-S 197 (381)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~--~~~~-------~~~~~~~g~~g~~~~~i~v~G-~ 197 (381)
+|.+ ++.+++.. + ...+ .+.++..+.+| .+++|+++| +
T Consensus 163 ------------------------~d~~-----~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~ 212 (487)
T 2qyv_A 163 ------------------------SEIL-----INTDTEENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLR 212 (487)
T ss_dssp ------------------------CSEE-----EECCCCCTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCC
T ss_pred ------------------------CCEE-----EEEccCCCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccC
Confidence 1111 12222100 0 0000 00011123455 889999999 8
Q ss_pred CCCCCCCCCCCC-CCHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEE
Q 016853 198 QGHAGTVPMSMR-QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFT 276 (381)
Q Consensus 198 ~~Hs~~~p~~~g-~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~ 276 (381)
++|||.+| +.+ .||+..+++++.+|+.+.. ..+++++.|++ |.+.|+||++|++.
T Consensus 213 ~~Hsg~~~-~~g~~nAi~~~~~~i~~l~~~~~----------------------~~~~~v~~i~g-G~~~NvIP~~a~~~ 268 (487)
T 2qyv_A 213 GGHSGVDI-HTGRANAIKVLLRFLAELQQNQP----------------------HFDFTLANIRG-GSIRNAIPRESVAT 268 (487)
T ss_dssp CCBTTTTT-TSCCCCHHHHHHHHHHHHHHHCT----------------------TCCEEEEEEEE-ESCTTBCCCCEEEE
T ss_pred CccCCccc-ccCCCCHHHHHHHHHHHHhhccC----------------------CCcEEEEEEeC-CCcCcccCCceEEE
Confidence 99999855 455 7999999999999987631 34789999999 79999999999999
Q ss_pred EEe----------------------------------------eCCChhHHHHHHHHHHHH-------------------
Q 016853 277 VDL----------------------------------------RAIDDAGRETVLYELSNQ------------------- 297 (381)
Q Consensus 277 ~di----------------------------------------R~~p~~~~~~~~~~i~~~------------------- 297 (381)
+++ |+.|.++.+.+++.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~ 348 (487)
T 2qyv_A 269 LVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSL 348 (487)
T ss_dssp EEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSEEECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEE
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeccccccccCHHHHHHHHHHHHhCCCcceeeccccCCceEecc
Confidence 999 889999999888887765
Q ss_pred --------------------------------HHHHHHHcCceEEEEEeccCCCcc--CCHHHHHHHHHHHHHHHhhccC
Q 016853 298 --------------------------------LYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTG 343 (381)
Q Consensus 298 --------------------------------~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~ 343 (381)
++.++..+++++++.. .+|++. .++++++.+.+++++++|.+
T Consensus 349 nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~p~~~~~~d~~l~~~~~~~~~~~~G~~-- 424 (487)
T 2qyv_A 349 SIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNINLSG--DYPGWEPQSHSDILDLTKTIYAQVLGTD-- 424 (487)
T ss_dssp EEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEEEEEE--EECCBCCCSCCHHHHHHHHHHHHHHSSC--
T ss_pred ceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceEEECC--CCCCCCCCCCCHHHHHHHHHHHHHhCCC--
Confidence 3445666788876653 456654 58889999999999988864
Q ss_pred CCCcccccccCcccHHHHHHhhhcCe--EEEEEe
Q 016853 344 ATQHEIPVIMSGAGHDAMAMSHLTKV--CSLLCR 375 (381)
Q Consensus 344 ~~~~~~~~~~~~g~tD~~~~~~~~p~--~~~~~~ 375 (381)
+...+++|+||+++|.+.+|. ++.|.|
T Consensus 425 -----~~~~~~~gg~D~~~~~~~~pg~~~v~~Gp 453 (487)
T 2qyv_A 425 -----PEIKVIHAGLECGLLKKIYPTIDMVSIGP 453 (487)
T ss_dssp -----CEEEEESSCCTHHHHHHHCTTSEEEECCC
T ss_pred -----CeEEEEeccccHHHHHhhCCCCCEEEECC
Confidence 223355689999999987564 345555
No 25
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=1.5e-33 Score=281.60 Aligned_cols=301 Identities=18% Similarity=0.188 Sum_probs=211.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCC--CCCCeEEEeecccCCcCC---------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDA--------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~--~~~~~i~l~~H~DtVp~~--------------------- 57 (381)
+|++|.++++||.++|+++|++++++..+|++++++|+. +++|+|+|.|||||||..
T Consensus 29 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~ 108 (490)
T 3mru_A 29 PSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEW 108 (490)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTE
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEEcCCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCe
Confidence 478899999999999999999999988899999998652 247999999999999863
Q ss_pred ----CCC---cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhc-cCCccccccccCCCC
Q 016853 58 ----GIF---DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG-ILPVSALRVSDKSGV 129 (381)
Q Consensus 58 ----g~~---D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~-~l~~~~~~~~d~~g~ 129 (381)
|.. |||+|+|++|+++ ++.+ .++++|.++|+++||.+ +.|++.+.. .+........|..
T Consensus 109 l~g~G~~lgaD~k~g~a~~l~~l---~~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~~~~~~~~~~~d~~-- 175 (490)
T 3mru_A 109 VTAKGTTLGADNGIGMASCLAVL---ASKE---IKHGPIEVLLTIDEEAG-----MTGAFGLEAGWLKGDILLNTDSE-- 175 (490)
T ss_dssp EEETTBCCCHHHHTTHHHHHHHH---HCSS---CCCCSEEEEEESCSSST-----TGGGGTCCSSSCCSSEEEECCCC--
T ss_pred EecCCCccCCCCHHHHHHHHHHH---HhCC---CCCCCEEEEEEcccccc-----cHhHHHhhhcccCCCEEEEcCCC--
Confidence 332 9999999998875 4444 57899999999999984 468887652 1111100000100
Q ss_pred cHHHHHHHCCCChhhhhhhhccCCCccchheeeecccCCcccccCCCcceEEEeeecceEEEEEEEe-cCCCCCCCCCCC
Q 016853 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG-SQGHAGTVPMSM 208 (381)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G-~~~Hs~~~p~~~ 208 (381)
....+. ...-.|.... ...+.....+++|..+++|+++| +++|||..| +.
T Consensus 176 -----------------------~~g~~~----~g~~~g~~~~-~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p-~~ 226 (490)
T 3mru_A 176 -----------------------QEGEVY----MGCAGGIDGA-MTFDITRDAIPAGFITRQLTLKGLKGGHSGCDI-HT 226 (490)
T ss_dssp -----------------------CTTCCE----EEECEEEEEE-EEEECCEECCCTTEEEEEEEEECCCCEETTTSS-SS
T ss_pred -----------------------CCCeEE----EecCCccceE-EEeeeeeeccCCCceEEEEEEECCCCccccccc-cc
Confidence 000000 0000000000 00000012346899999999999 899999778 79
Q ss_pred CC-CHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHH
Q 016853 209 RQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGR 287 (381)
Q Consensus 209 g~-NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~ 287 (381)
|. ||+..+++++.+|++ + .+++++.|+| |.+.|+||++|++.+++|....+..
T Consensus 227 g~~nai~~~~~~l~~l~~---~----------------------~~~~v~~i~g-G~~~NvIP~~a~~~~~iR~~~~~~~ 280 (490)
T 3mru_A 227 GRGNANKLIGRFLAGHAQ---E----------------------LDLRLVEFRG-GSLRNAIPREAFVTVALPAENQDKL 280 (490)
T ss_dssp CCCCHHHHHHHHHHHHTT---T----------------------TTCEEEEEEE-CSCTTEECCCEEEEEEEEGGGHHHH
T ss_pred CCcCHHHHHHHHHHHHHh---c----------------------CcEEEEEEEC-CCCCcccCCccEEEEEECcccHHHH
Confidence 99 999999999988764 1 2468899999 8999999999999999987766666
Q ss_pred HHHHHHHHHHHHHH------------------------------------------------------------------
Q 016853 288 ETVLYELSNQLYQI------------------------------------------------------------------ 301 (381)
Q Consensus 288 ~~~~~~i~~~~~~~------------------------------------------------------------------ 301 (381)
+++.+++.+.++..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~ 360 (490)
T 3mru_A 281 AELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEEN 360 (490)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHhhccCCCeEEEEEecCCccccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCC
Confidence 55555554433321
Q ss_pred --------------------------HHHcCceEEEEEeccCCCcc--CCHHHHHHHHHHHHHHHhhccCCCCccccccc
Q 016853 302 --------------------------CEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIM 353 (381)
Q Consensus 302 --------------------------~~~~~~~v~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~ 353 (381)
...+++++++. ..+|++. .++++++.+.+++++++|.+ +..++
T Consensus 361 ~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~~~~--~~~p~~~~~~d~~lv~~l~~a~~~~~G~~-------~~~~~ 431 (490)
T 3mru_A 361 KVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIEFS--GAYPGWKPDADSEIMAIFRDMYEGIYGHK-------PNIMV 431 (490)
T ss_dssp EEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEEEEE--EEECCBCCCTTCHHHHHHHHHHHTTSSSC-------CCCEE
T ss_pred EEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeEEec--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-------CeEEE
Confidence 22344454443 3556654 67889999999999987754 44556
Q ss_pred CcccHHHHHHhhhcCe--EEEEEeeCC
Q 016853 354 SGAGHDAMAMSHLTKV--CSLLCRLNN 378 (381)
Q Consensus 354 ~~g~tD~~~~~~~~p~--~~~~~~~~~ 378 (381)
++||+|+++|++.+|. ++.|+|+..
T Consensus 432 ~ggg~d~~~~~~~~p~~~~v~fGp~~~ 458 (490)
T 3mru_A 432 IHAGLECGLFKEPYPNMDMVSFGPTIK 458 (490)
T ss_dssp ESSCCHHHHTTSSCTTCEEEECCCCEE
T ss_pred EEecHHHHHHHHhCCCCCEEEECCCCC
Confidence 7899999999998886 678888754
No 26
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=4.8e-33 Score=278.22 Aligned_cols=329 Identities=16% Similarity=0.127 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEec-CCCCCCCeEEEeecccCCcCC--------------------CCCcC
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVE-GLNASAQALLIGSHLDTVVDA--------------------GIFDG 62 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~-g~~~~~~~i~l~~H~DtVp~~--------------------g~~D~ 62 (381)
++.++++||.++|+++||+++.. +|+++.+. |. ++|+|+|+|||||||.+ |..||
T Consensus 64 ~~~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~ 139 (492)
T 3khx_A 64 GPRKALDYMYEIAHRDGFTTHDV--DHIAGRIEAGK--GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDD 139 (492)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEE--TTTEEEEEEEC--SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTT
T ss_pred HHHHHHHHHHHHHHHcCCcceEe--CCEEEEEEeCC--CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccC
Confidence 45799999999999999998654 57666554 43 46899999999999964 56799
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccccc-cccCCCCcHHHHHHHCCCC
Q 016853 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALR-VSDKSGVTVLDALRENSID 141 (381)
Q Consensus 63 k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~~~-~~d~~g~~~~~~~~~~g~~ 141 (381)
|++++++|+|+++|++.++ .++++|.++|+++||+++ .|++.++.....-.+- ..|.+... -.|.+
T Consensus 140 Kg~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~-----~g~~~~~~~~~~~~~~~~~d~~~p~------~~g~~ 206 (492)
T 3khx_A 140 KGPTIAAYYAIKILEDMNV--DWKKRIHMIIGTDEESDW-----KCTDRYFKTEEMPTLGFAPDAEFPC------IHGEK 206 (492)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSSEEEEEEECCTTCCC-----CTTSHHHHHSCCCSEEECSSCSSCS------CCCBC
T ss_pred cHHHHHHHHHHHHHHHcCC--CCCCCEEEEEECCccCCC-----cCHHHHHHhCcCCCEEEecCCCccE------EEecC
Confidence 9999999999999999987 789999999999999863 5888886432211100 01110000 00000
Q ss_pred hhhhh-h----------------------hhccCCCccchheeeecccCCcccccCCCcceE---EEeeecce-----EE
Q 016853 142 IAEES-L----------------------LQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGV---VQGIAGQT-----RL 190 (381)
Q Consensus 142 ~~~~~-~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~g~~-----~~ 190 (381)
+.... + ...+..||.+.+. ..++... .......+. ..+.+|.. ++
T Consensus 207 G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~ai---v~ept~~-~~~~~~~~~~~~~~g~kG~~~~~~~~~ 282 (492)
T 3khx_A 207 GITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEAR---VLVKENM-TDVIQDFEYFLEQNHLQGDSTVDSGIL 282 (492)
T ss_dssp EEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEE---EEECSCH-HHHHHHHHHHHHHTTCEEEEEEETTEE
T ss_pred cEEEEEEEEeccccccccccceeEEecccccCCcCCchHheE---eecccch-HHHHHHHHHHHhhcCceeEEEecCCeE
Confidence 00000 0 0000111111100 0000000 000000000 11357778 99
Q ss_pred EEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH------HHhc---CCCCccccC-CCCCCcccccCCCCeEEEEEEEE
Q 016853 191 KVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE------RLCK---HPKDFLSYD-GRSNCSTLESLSSSLVCTVGEIS 260 (381)
Q Consensus 191 ~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~------~~~~---~~~~~~~~~-~~~~~~~~~p~~~~~ti~~~~i~ 260 (381)
+|+++|+++|+|. | +.|.|||..+++++.+|+ .+.. +.+. ..+. ........++..+.+++|++.|+
T Consensus 283 ~i~v~GkaaHas~-P-~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~d~~~G~~t~n~g~i~ 359 (492)
T 3khx_A 283 VLTVEGKAVHGMD-P-SIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLF-NSDFGEKMGMKFHTDVMGDVTTNIGVIT 359 (492)
T ss_dssp EEEEECBCCCC--------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTT-TCTTSGGGTCC-------CCEEEEEEEE
T ss_pred EEEEEeEEcccCC-C-ccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhC-CCCCccccCCccccCCcCccEEeeeEEE
Confidence 9999999999996 9 799999999999998876 2210 0000 0000 00000112344568899999999
Q ss_pred ecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCC--ccCCHHHHHHHHHHHHHHH
Q 016853 261 SWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA--VMCDADLSSQLKSASYAAL 338 (381)
Q Consensus 261 g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~l~~a~~~~~ 338 (381)
+ +. |++|++.+|+|+++.++.+++.++|+++++ .+++++++.. .+++ +..++++++.+.+++++.+
T Consensus 360 ~-g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~----~~g~~~~i~~--~~~p~~~~~d~~lv~~l~~a~~~~~ 427 (492)
T 3khx_A 360 Y-DN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ----QYGFEVKLGK--VQPPHYVDKNDPFVQKLVTAYRNQT 427 (492)
T ss_dssp E-ET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG----GGTEEEEEEE--EECCBCCGGGCHHHHHHHHHHHTTC
T ss_pred E-ec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH----HcCCEEEEec--cCCceecCCCcHHHHHHHHHHHHHh
Confidence 9 54 999999999999999999999999988774 4577777654 3343 3467889999999999876
Q ss_pred hhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEee
Q 016853 339 KRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRL 376 (381)
Q Consensus 339 g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~ 376 (381)
|.+ +..+.++|+||++++...+|...+| |+
T Consensus 428 G~~-------~~~~~~gggtDa~~~~~~v~~G~~f-Pg 457 (492)
T 3khx_A 428 NDM-------TEPYTIGGGTYARNLDKGVAFGAMF-SD 457 (492)
T ss_dssp C-------------------------------------
T ss_pred CCC-------CeEEeeehhHHHHHhhCceEECCcC-CC
Confidence 653 3444678999999998766655454 44
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.97 E-value=5.6e-31 Score=262.14 Aligned_cols=315 Identities=13% Similarity=0.100 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC---------------------CCCcC
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------GIFDG 62 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------------g~~D~ 62 (381)
++.++++||.++|+++||+++.....++++.+ |. ++|+|+|++||||||.+ |++||
T Consensus 44 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~-g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~ 120 (470)
T 1lfw_A 44 GPVDAMTKFLSFAKRDGFDTENFANYAGRVNF-GA--GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADD 120 (470)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEETTTEEEEEE-CC--CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSS
T ss_pred HHHHHHHHHHHHHHHcCCeEEEecCeEEEEEe-CC--CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccC
Confidence 56899999999999999998764433467777 54 36999999999999853 44799
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCccc-cccccCCCCcHHHHHHHCCCC
Q 016853 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSA-LRVSDKSGVTVLDALRENSID 141 (381)
Q Consensus 63 k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~~~-~~~~d~~g~~~~~~~~~~g~~ 141 (381)
|++++++|+|+++|++.++ .++++|.++|+++||++ ..|++.+........ ....|.++..+ .|.
T Consensus 121 K~~~a~~l~a~~~l~~~~~--~~~~~i~~i~~~~EE~g-----~~G~~~~~~~~~~~~~~~~~D~~~~~~------~ge- 186 (470)
T 1lfw_A 121 KGPSLTAYYGMLLLKEAGF--KPKKKIDFVLGTNEETN-----WVGIDYYLKHEPTPDIVFSPDAEYPII------NGE- 186 (470)
T ss_dssp HHHHHHHHHHHHHHHHHTC--CCSSEEEEEEESCTTTT-----CHHHHHHHHHSCCCSEEEESSEESSEE------EEE-
T ss_pred hHHHHHHHHHHHHHHHcCC--CCCCCEEEEEecCcccC-----CccHHHHHHhCcCCcEEEEeCCCceEE------Eec-
Confidence 9999999999999999887 78999999999999984 368888764211100 00011100000 000
Q ss_pred hhhhhhhhccCCCccchheeeecccCC----c----------ccccCCCcceEEE-------------------eeecce
Q 016853 142 IAEESLLQLKYDPASVWGYIEVHIEQG----P----------VLEWVGFPLGVVQ-------------------GIAGQT 188 (381)
Q Consensus 142 ~~~~~~~~~~~~~d~~~~~~~~~~~~~----~----------~~~~~~~~~~~~~-------------------g~~g~~ 188 (381)
+. ..++++++++. . ..+.......... +.+|..
T Consensus 187 ------------~g--~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 252 (470)
T 1lfw_A 187 ------------QG--IFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGSF 252 (470)
T ss_dssp ------------CE--EEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEEE
T ss_pred ------------cc--eEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccce
Confidence 00 01122232210 0 0000000000010 134543
Q ss_pred -----EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH------HHh---cCCCCccccCCC-CCCcccccCCCCeE
Q 016853 189 -----RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE------RLC---KHPKDFLSYDGR-SNCSTLESLSSSLV 253 (381)
Q Consensus 189 -----~~~i~v~G~~~Hs~~~p~~~g~NAi~~~~~~i~~l~------~~~---~~~~~~~~~~~~-~~~~~~~p~~~~~t 253 (381)
+++|+++|+++|++. | +.|.||+..+++++.+|+ .+. .+... ...... ......++..+.++
T Consensus 253 ~~~~~~~~i~v~G~~~Ha~~-P-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~t 329 (470)
T 1lfw_A 253 EINDESADIVLIGQGAHASA-P-QVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEH-EDFYGKKLGIFHHDDLMGDLA 329 (470)
T ss_dssp EEETTEEEEEEECBCCBTTC-G-GGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTT-TCTTSTTTTCCCEETTTEECE
T ss_pred eecCCcEEEEEeecccCCCC-C-ccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcC-CCCcccccCCcccccccccce
Confidence 899999999999997 9 799999999999998774 221 11000 000000 00000123334578
Q ss_pred EEEEEEEecCCCCceeCCe-EEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCcc--CCHHHHHHH
Q 016853 254 CTVGEISSWPSASNVIPGE-VTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQL 330 (381)
Q Consensus 254 i~~~~i~g~g~~~NvIP~~-a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~l 330 (381)
+|++.|++ +|++ |++.+++|+++.++.+.++++|+++++. +++ +++...+|++. +++++++.+
T Consensus 330 ~~~g~i~~-------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g~~--v~~~~~~~~~~~~~d~~l~~~~ 395 (470)
T 1lfw_A 330 SSPSMFDY-------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----ILD--VTYNGFEEPHYVPGSDPMVQTL 395 (470)
T ss_dssp EEEEEEEE-------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----TEE--EECSCCBCCEECCTTCHHHHHH
T ss_pred EEEEEEEE-------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----CeE--EEEEeCCCceeeCCCCHHHHHH
Confidence 89888876 4899 9999999999999999999999988754 554 44445566654 688899999
Q ss_pred HHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeC
Q 016853 331 KSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLN 377 (381)
Q Consensus 331 ~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~ 377 (381)
.+++++++|.++ ....++|++|++++. |+ +.|.|..
T Consensus 396 ~~a~~~~~g~~~-------~~~~~~g~~d~~~~~---~~-v~~G~~~ 431 (470)
T 1lfw_A 396 LKVYEKQTGKPG-------HEVVIGGGTYGRLFE---RG-VAFGAQP 431 (470)
T ss_dssp HHHHHHHHCCCC-------CEEEESSCCGGGGST---TC-EECCEEC
T ss_pred HHHHHHHcCCCC-------ceeeecCHhHHHhCC---Ce-EEECCCC
Confidence 999999887642 223456889999885 54 5666654
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.80 E-value=1.3e-18 Score=160.29 Aligned_cols=104 Identities=19% Similarity=0.256 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---CCCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~---~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------------- 57 (381)
+|++|.++++||.++|+++|++++.. ..+|+++++ |. ++|+|+|+|||||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~ 97 (268)
T 3t68_A 21 VTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARR-GT--QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLH 97 (268)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEE
T ss_pred CCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEe-CC--CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEE
Confidence 36788899999999999999998654 346899998 64 46899999999999963
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
|+.|||+|++++|.|+++|++.+. .++++|.++|+++||.+. ..|++.+.
T Consensus 98 g~G~~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~----~~Ga~~~~ 149 (268)
T 3t68_A 98 GRGAADMKGSLACMIVAVERFIAEHP--DHQGSIGFLITSDEEGPF----INGTVRVV 149 (268)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCTTSSS----CCHHHHHH
T ss_pred ecCcccchHHHHHHHHHHHHHHHhCC--CCCCcEEEEEEeCCccCc----ccCHHHHH
Confidence 678999999999999999998875 688999999999999862 24888775
No 29
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.75 E-value=8.4e-18 Score=147.73 Aligned_cols=104 Identities=21% Similarity=0.165 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcC----CCCEEEEecCCCCCCCeEEEeecccCCcCC----------------------
Q 016853 4 ASVRAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (381)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~----~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~---------------------- 57 (381)
+|.++++||.++|+++|++++++. ..|++++++|..++.|+|+|+|||||||.+
T Consensus 30 ~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~Gr 109 (198)
T 1q7l_A 30 DYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYAR 109 (198)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECT
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeC
Confidence 689999999999999999987764 238999998765445899999999999862
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
|+.|||++++++|+|+++|++.+. .++++|.++|+++||.+ +..|++.++
T Consensus 110 Ga~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g----~~~Ga~~~~ 159 (198)
T 1q7l_A 110 GAQDMKCVSIQYLEAVRRLKVEGH--RFPRTIHMTFVPDEEVG----GHQGMELFV 159 (198)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHTTC--CCSSCEEEEEESCGGGT----STTTHHHHT
T ss_pred cchhchHHHHHHHHHHHHHHHcCC--CCCCCEEEEEEcccccC----ccccHHHHH
Confidence 458999999999999999999886 78899999999999985 246888875
No 30
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.68 E-value=1.4e-16 Score=146.74 Aligned_cols=104 Identities=20% Similarity=0.223 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcC---CCCEEEEecCCCCCCCeEEEeecccCCcCC--------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~---~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-------------------- 57 (381)
+|++|.++++||.++|+++||+++... .+|+++++ |. ++|+|+|+|||||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~ 97 (269)
T 4h2k_A 21 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 97 (269)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEe-CC--CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEE
Confidence 367888999999999999999987653 46899998 54 46899999999999963
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
|+.|||+|++++|.|+++|++.+. .++++|.++|+++||.+. ..|++.+.
T Consensus 98 grG~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~----~~Ga~~~~ 149 (269)
T 4h2k_A 98 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEATA----KDGTIHVV 149 (269)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----TTSHHHHH
T ss_pred eCCcccChHHHHHHHHHHHHHHHhCC--CCCccEEEEEEeccccCc----ccCHHHHH
Confidence 678999999999999999998875 688999999999999862 24898875
No 31
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.67 E-value=1.6e-16 Score=147.43 Aligned_cols=105 Identities=20% Similarity=0.312 Sum_probs=92.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCC-------CCEEEEecCCCCCCCeEEEeecccCCcCC-CCCcChHHHHHHHHHH
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHL-------GNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISAL 73 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~-------gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-g~~D~k~giaa~l~a~ 73 (381)
|.+|.++++||.++|+++|++++++.. .|++++++|..+ .+.|+|.+|||+||.+ |+.|||+|++++|+++
T Consensus 31 ~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~-~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~ 109 (284)
T 1tkj_A 31 RPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDP-NKVLMAGAHLDSVSSGAGINDNGSGSAAVLETA 109 (284)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEE-EEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCC-CCEEEEEeecCCCCCCCCCccChHHHHHHHHHH
Confidence 348999999999999999999887654 499999987533 4899999999999987 8999999999999999
Q ss_pred HHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhc
Q 016853 74 KVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (381)
Q Consensus 74 ~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~ 114 (381)
++|++.+. +++++|.|+|+++||.+ ..||+.++.
T Consensus 110 ~~l~~~~~--~~~~~i~~~~~~~EE~g-----~~Gs~~~~~ 143 (284)
T 1tkj_A 110 LAVSRAGY--QPDKHLRFAWWGAEELG-----LIGSKFYVN 143 (284)
T ss_dssp HHHHHTTC--CCSEEEEEEEESCGGGT-----SHHHHHHHH
T ss_pred HHHHhcCC--CCCceEEEEEECCcccC-----CcCHHHHHh
Confidence 99999886 78899999999999984 579998864
No 32
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.61 E-value=1.2e-15 Score=142.64 Aligned_cols=105 Identities=26% Similarity=0.369 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHHHHHHcC--CE-EEEcC-------CCCEEEEecCCCCCCCeEEEeecccCCc---------CCCCCcC
Q 016853 2 SPASVRAGNLIRQWMEDAG--LR-TWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVV---------DAGIFDG 62 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G--~~-~~~~~-------~gnv~a~~~g~~~~~~~i~l~~H~DtVp---------~~g~~D~ 62 (381)
|+.|.++++||.++|+++| ++ ++++. .+|++++++|..+..+.|+|.+|+|||| ..|+.||
T Consensus 39 s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~ 118 (299)
T 1rtq_A 39 TTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDD 118 (299)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTT
T ss_pred CchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccccCCCcCcCCCcccCCCccc
Confidence 6789999999999999987 43 44443 2799999988642247899999999998 3588899
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 63 k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
|+|++++|+++++|++.+. .++++|.++++++||.+ +.||+.++
T Consensus 119 ~~g~a~~l~~~~~l~~~~~--~~~~~i~~~~~~~EE~g-----~~Gs~~~~ 162 (299)
T 1rtq_A 119 ASGIAAVTEVIRVLSENNF--QPKRSIAFMAYAAEEVG-----LRGSQDLA 162 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGGT-----SHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC--CCCceEEEEEECCccCC-----chhHHHHH
Confidence 9999999999999999886 78899999999999984 58999876
No 33
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.60 E-value=5.7e-15 Score=138.20 Aligned_cols=107 Identities=19% Similarity=0.285 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcC------------CCCEEEEecCCCCCCCeEEEeecccCCcCC------------
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~------------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------ 57 (381)
|+.+.++++||.++|+++|++++++. ..||+++++|.. .+.|+|.+|+|+||.+
T Consensus 44 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 121 (309)
T 3tc8_A 44 TAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPEN--SKRVLLFAHWDSRPYSDHDPDPSKHRTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCC--CceEEEEecccCCCCCCCCccccCCCcc
Confidence 67899999999999999999987654 269999999853 5899999999999975
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCC--CCCC------CcchHHHhc
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR--FQST------FLGSAALAG 114 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~--~~~~------~~Gs~~l~~ 114 (381)
|+.|+++|+|++|++++.|++. .++++|.|+++.+||.+- |.++ ++||+++..
T Consensus 122 ~~Ga~D~~sGva~~Le~ar~l~~~----~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~ 184 (309)
T 3tc8_A 122 LDGADDGGSGVGALLEIARQIGQK----APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAK 184 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHH
T ss_pred ccCcccchHhHHHHHHHHHHHHhC----CCCCcEEEEEECccccccccccccccccccchhHHHHHh
Confidence 8899999999999999999987 478999999999999841 2111 289998863
No 34
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.59 E-value=5.1e-15 Score=138.60 Aligned_cols=107 Identities=20% Similarity=0.291 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCC------------CCEEEEecCCCCCCCeEEEeecccCCcCC------------
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHL------------GNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~------------gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------ 57 (381)
|..|.++++||.++|+++|++++++.. .||+++++|.. .+.|+|.+|+|+||.+
T Consensus 46 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 123 (314)
T 3gux_A 46 TQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPES--KKRILLCAHWDSRPYADNDPDPKNHHTP 123 (314)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCC--------------
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCC--CceEEEEccccCCCcCCCCcccccCCcc
Confidence 678999999999999999999876542 59999998863 4899999999999874
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCC--CCC-------CCcchHHHhc
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR--FQS-------TFLGSAALAG 114 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~--~~~-------~~~Gs~~l~~ 114 (381)
|+.|+++|+|++|+++++|++. .++++|.|+++.+||.+- |.+ ..+||+++..
T Consensus 124 ~~GA~D~~sGva~~Le~ar~l~~~----~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~ 187 (314)
T 3gux_A 124 ILGVNDGASGVGVLLEIARQIQKE----QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWAR 187 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHH
T ss_pred cCCCcccHHHHHHHHHHHHHHHhC----CCCCcEEEEEECCccccccccccccccccccchhHHHHHh
Confidence 8899999999999999999987 478999999999999841 110 1278988863
No 35
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.57 E-value=8.3e-15 Score=138.58 Aligned_cols=109 Identities=23% Similarity=0.295 Sum_probs=90.6
Q ss_pred CHHHHHHHHHHHHHHHH--cCCEEEEcC-----------CCCEEEEecCCCCCCCeEEEeecccCCcCC--------CCC
Q 016853 2 SPASVRAGNLIRQWMED--AGLRTWVDH-----------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------GIF 60 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~--~G~~~~~~~-----------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~--------g~~ 60 (381)
|+.+.++++||.++|++ .|++++++. ..||+++++|. ..+.|++.+|+|+||.+ |+.
T Consensus 49 s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~--~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~ 126 (329)
T 2afw_A 49 SPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPT--AKRHLVLACHYDSKYFSHWNNRVFVGAT 126 (329)
T ss_dssp SHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTT--SSEEEEEEEECCCCCCCCBTTBCCCCTT
T ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCC--CCcEEEEEEeccCCCcCcccCcCCCCcc
Confidence 55677899999999999 999987653 36999999885 35899999999999975 899
Q ss_pred cChHHHHHHHHHHHHHHhc--------CCCCCCCCCEEEEEeccccCCCCCC---CCcchHHHhc
Q 016853 61 DGSLGIITAISALKVLKST--------GKLGKLKRPVEVIAFSDEEGVRFQS---TFLGSAALAG 114 (381)
Q Consensus 61 D~k~giaa~l~a~~~l~~~--------~~~~~~~~~i~~~~~~~EE~~~~~~---~~~Gs~~l~~ 114 (381)
|+++|+|++|++++.|++. |. .++++|.|+++.+||..+|-+ |+.||+++.+
T Consensus 127 D~~sGva~~le~ar~l~~~~~~~~~~~g~--~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~ 189 (329)
T 2afw_A 127 DSAVPCAMMLELARALDKKLLSLKTVSDS--KPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAA 189 (329)
T ss_dssp TTHHHHHHHHHHHHHTHHHHHTTC--------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHhhhcccccC--CCCccEEEEEecCcccccccCCCccchhHHHHHH
Confidence 9999999999999999876 34 688999999999999844311 5789998864
No 36
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.53 E-value=9.8e-19 Score=164.69 Aligned_cols=94 Identities=17% Similarity=0.232 Sum_probs=66.2
Q ss_pred CCHHHH-HHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcCC------------CCCcChHHHH
Q 016853 1 MSPASV-RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------GIFDGSLGII 67 (381)
Q Consensus 1 ~s~~E~-~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------g~~D~k~gia 67 (381)
+|++|. ++++||.++|+++|+++++|+.||++++++|. +|+|+|.|||||||.. ++.+++.+.+
T Consensus 24 ~sg~E~~~v~~~l~~~l~~~G~~v~~D~~GNlia~~~g~---~p~lll~~H~Dtvp~~v~~~~~~g~~~~~~~~~~~~~~ 100 (354)
T 2wzn_A 24 VSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPET 100 (354)
T ss_dssp BTTCGGGTHHHHHHHHHHTTSSEEEECTTCCEEEEECCS---SSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGG
T ss_pred CCcchHHHHHHHHHHHHHHcCCEEEEeCCCeEEEEECCC---CceEEEEeccccCCCcCCeeecCCceeeccCCCccHHH
Confidence 367775 68999999999999999999999999999763 5899999999999853 1112222222
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 68 a~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
+.+.++..+.+.+ .+...+.++++.+||.+
T Consensus 101 ~~~~~~~~~~~~~---~~~~~~~~~~~~~ee~~ 130 (354)
T 2wzn_A 101 LVAQRIRFFTEKG---ERYGVVGVLPPHLRRGQ 130 (354)
T ss_dssp GTTCEEEEEETTE---EEEEEECCCCGGGC---
T ss_pred HHHHHHHHhhccC---CccceEEEeeeeeEecc
Confidence 3333333344444 45677888889999975
No 37
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.51 E-value=1.1e-14 Score=138.55 Aligned_cols=101 Identities=25% Similarity=0.278 Sum_probs=82.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcC----------------C-------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~----------------~------- 57 (381)
+|++|.++++||.++|+++|++++++..+|+++.++|.. +.|+|+|.||||+||. |
T Consensus 13 ~sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~ 91 (340)
T 2fvg_A 13 VSGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIALKRGRD-SSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRIL 91 (340)
T ss_dssp BTTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGC
T ss_pred CCCchHHHHHHHHHHHHhhCCEEEEeCCCcEEEEecCCC-CCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCcccccc
Confidence 377899999999999999999999999999999987643 3589999999999981 1
Q ss_pred -----------------------------------------------------C-------------------CCcChHH
Q 016853 58 -----------------------------------------------------G-------------------IFDGSLG 65 (381)
Q Consensus 58 -----------------------------------------------------g-------------------~~D~k~g 65 (381)
| +.|||+|
T Consensus 92 ~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g 171 (340)
T 2fvg_A 92 PGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAG 171 (340)
T ss_dssp TTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHH
T ss_pred cCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHH
Confidence 2 3799999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 66 IITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 66 iaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
++++|+|+++|+ .++++|.++|+.+||.+ ..|++++.
T Consensus 172 ~a~~l~a~~~l~------~~~~~i~~~~~~~EE~G-----~~G~~~~~ 208 (340)
T 2fvg_A 172 CSVLIDVLESGV------SPAYDTYFVFTVQEETG-----LRGSAVVV 208 (340)
T ss_dssp HHHHHHHHHTCC------CCSEEEEEEEECCCC----------CHHHH
T ss_pred HHHHHHHHHHhh------ccCCcEEEEEEcccccc-----hhhhHHHh
Confidence 999999998886 25789999999999985 36777664
No 38
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.50 E-value=2.1e-14 Score=137.09 Aligned_cols=102 Identities=22% Similarity=0.287 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCc----------------CC--------
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA-------- 57 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp----------------~~-------- 57 (381)
|++|.++++||.++|+++|++++++..+|++++++|.. +.|+|+|+||||||+ .|
T Consensus 22 s~~e~~~~~~l~~~l~~~g~~~~~d~~gnl~a~~~g~~-~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 100 (349)
T 2gre_A 22 SGNTAKIINFIENYVSEWNVETKRNNKGALILTVKGKN-DAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVE 100 (349)
T ss_dssp TTCCHHHHHHHHHHTTTSSSEEEECSSSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTT
T ss_pred CccHHHHHHHHHHHHHHhCCEEEEecCCcEEEEecCCC-CCceEEEEecccccceeEEEECCCCeEEEEecCCCcccccc
Confidence 67889999999999999999999999999999997753 248999999999993 10
Q ss_pred ----------C---------------------------------------------------------------------
Q 016853 58 ----------G--------------------------------------------------------------------- 58 (381)
Q Consensus 58 ----------g--------------------------------------------------------------------- 58 (381)
|
T Consensus 101 ~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i 180 (349)
T 2gre_A 101 GEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYI 180 (349)
T ss_dssp TCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEE
T ss_pred CcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeE
Confidence 0
Q ss_pred ---CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHH
Q 016853 59 ---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAA 111 (381)
Q Consensus 59 ---~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~ 111 (381)
+.|||+|++++|+|+++|++.+. .++++|.++|+++||.+ ..|++.
T Consensus 181 ~gr~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~G-----~~g~~~ 229 (349)
T 2gre_A 181 KSRHLDDKVSVAILLKLIKRLQDENV--TLPYTTHFLISNNEEIG-----YGGNSN 229 (349)
T ss_dssp EESCCTTHHHHHHHHHHHHHHHHHTC--CCSEEEEEEEESCC---------CCCCC
T ss_pred EEeeccchHHHHHHHHHHHHHHhccC--CCCceEEEEEECcccCC-----chhhcc
Confidence 38999999999999999998876 67899999999999985 346654
No 39
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.48 E-value=8.5e-14 Score=133.99 Aligned_cols=103 Identities=22% Similarity=0.320 Sum_probs=88.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcC------------------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD------------------------ 56 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~------------------------ 56 (381)
+|++|.++++||.++|+++|++++++..+|++++++|.. +.|+|+|.||||||+.
T Consensus 22 ~sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~ 100 (373)
T 1vhe_A 22 IPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAE-NGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVM 100 (373)
T ss_dssp CTTCCHHHHHHHHHHHGGGCSEEEECTTCCEEEEEESST-TSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGT
T ss_pred CCCchHHHHHHHHHHHHhhCCEEEEcCCCcEEEEecCCC-CCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhc
Confidence 478899999999999999999999999999999987753 3589999999999981
Q ss_pred --------------------------------------------C--------------C--------------------
Q 016853 57 --------------------------------------------A--------------G-------------------- 58 (381)
Q Consensus 57 --------------------------------------------~--------------g-------------------- 58 (381)
+ |
T Consensus 101 ~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~g 180 (373)
T 1vhe_A 101 LAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLA 180 (373)
T ss_dssp TTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEE
T ss_pred cCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEe
Confidence 0 1
Q ss_pred -CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 59 -IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 59 -~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
+.|||+|++++|.|+++|++.+ ++++|.++|+++||.+ ..|++.+.
T Consensus 181 r~~D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~G-----~~G~~~~~ 227 (373)
T 1vhe_A 181 KAWDNRIGCAIAIDVLRNLQNTD----HPNIVYGVGTVQEEVG-----LRGAKTAA 227 (373)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTSC----CSSEEEEEEESCCTTT-----SHHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHHhhcC----CCceEEEEEECCcccC-----hhhHHHHh
Confidence 5799999999999999998764 5699999999999984 46777653
No 40
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.47 E-value=6e-14 Score=132.92 Aligned_cols=100 Identities=25% Similarity=0.257 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCc----------------CCC------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DAG------ 58 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp----------------~~g------ 58 (381)
+|++|.++++||.++|+++|+ ++.|..+|++++++| + .|+|+|+||||||+ .||
T Consensus 17 ~sg~e~~~~~~l~~~l~~~g~-~~~d~~gnlia~~~~-~--~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~ 92 (332)
T 2wyr_A 17 ISGYEERIREEIIREIKDFAD-YKVDAIGNLIVELGE-G--EERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLL 92 (332)
T ss_dssp BTTCCHHHHHHHHHHHTTTCC-CEECTTCCEEEEEES-S--SEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGT
T ss_pred CCCcHHHHHHHHHHHHhhcCc-EEEcCCCeEEEEecC-C--CceEEEEeccCcccEEEEEECCCCeEEEEecCCcChhhc
Confidence 367899999999999999999 988999999999876 2 48999999999994 222
Q ss_pred ------------------------------------------------------------------------------CC
Q 016853 59 ------------------------------------------------------------------------------IF 60 (381)
Q Consensus 59 ------------------------------------------------------------------------------~~ 60 (381)
+.
T Consensus 93 ~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~~~~~~~i~gra~ 172 (332)
T 2wyr_A 93 YGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGKYVSTRGL 172 (332)
T ss_dssp TTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCEEETTTEEECTTH
T ss_pred cCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccEEecCCeEEcccC
Confidence 37
Q ss_pred cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 61 D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
|||+|++++|+|+++|++.+ ++++|.++|+++||.+ ..|++.+.
T Consensus 173 D~k~g~a~~l~a~~~l~~~~----~~~~i~~~~~~~EE~G-----~~G~~~~~ 216 (332)
T 2wyr_A 173 DDRFGVVALIEAIKDLVDHE----LEGKVIFAFTVQEEVG-----LKGAKFLA 216 (332)
T ss_dssp HHHHHHHHHHHHHHTTTTSC----CSSEEEEEEESCGGGT-----SHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHhhcC----CCceEEEEEECccccC-----cchHHHHh
Confidence 99999999999999998764 5699999999999984 46887764
No 41
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.43 E-value=3.7e-13 Score=126.57 Aligned_cols=107 Identities=19% Similarity=0.314 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHHHHc--CCEEEEcCC-----------CCEEEEecCCCCCCCeEEEeecccCCcC-------CCCCc
Q 016853 2 SPASVRAGNLIRQWMEDA--GLRTWVDHL-----------GNVHGRVEGLNASAQALLIGSHLDTVVD-------AGIFD 61 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~--G~~~~~~~~-----------gnv~a~~~g~~~~~~~i~l~~H~DtVp~-------~g~~D 61 (381)
|+.+.++++||.++|+++ |++++.+.. .||+++++|.. .+.|++.+|+|+|+. .|+.|
T Consensus 57 S~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~--~~~ivl~aH~Dsv~~~~g~~~~~GA~D 134 (330)
T 3pb6_X 57 SPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRA--ARHLTLACHYDSKLFPPGSTPFVGATD 134 (330)
T ss_dssp SHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTS--SEEEEEEEECCCCCCCTTSCCCCCTTT
T ss_pred CHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCC--CceEEEEeccCCCCCCCCCcCcCCCcC
Confidence 678899999999999999 899887653 69999998864 489999999999973 38889
Q ss_pred ChHHHHHHHHHHHHHHhc-----CCCCCCCCCEEEEEeccccCCCCC-----CCCcchHHHhc
Q 016853 62 GSLGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVRFQ-----STFLGSAALAG 114 (381)
Q Consensus 62 ~k~giaa~l~a~~~l~~~-----~~~~~~~~~i~~~~~~~EE~~~~~-----~~~~Gs~~l~~ 114 (381)
+.+|+|++|++++.|++. +. .++++|.|++..+||. |+ .|+.||+++++
T Consensus 135 ~asGva~lLe~ar~l~~~~~~~~~~--~~~~~i~fv~~~~EE~--f~~w~~~~gl~GS~~~a~ 193 (330)
T 3pb6_X 135 SAVPCALLLELAQALDLELSRAKKQ--AAPVTLQLLFLDGEEA--LKEWGPKDSLYGSRHLAQ 193 (330)
T ss_dssp THHHHHHHHHHHHHTHHHHHHHHHT--TCSEEEEEEEESCCSC--SSCCSTTSSCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHhhcccC--CCCCcEEEEEEcCccc--ccccCCCCCCccHHHHHH
Confidence 999999999999999873 23 6899999999999998 22 15799999874
No 42
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.36 E-value=9.2e-13 Score=125.81 Aligned_cols=99 Identities=26% Similarity=0.322 Sum_probs=84.1
Q ss_pred CCHHH-HHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCc----------------CC------
Q 016853 1 MSPAS-VRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA------ 57 (381)
Q Consensus 1 ~s~~E-~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp----------------~~------ 57 (381)
+|++| .++++||.++|+++|++++++..+|+++.++|. .|+|+|.||||||+ .|
T Consensus 21 ~sg~e~~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~---~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~ 97 (353)
T 1y0y_A 21 VSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGE---GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKT 97 (353)
T ss_dssp BTTCGGGTHHHHHHHHHGGGSSEEEECTTCCEEEEECCS---SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGG
T ss_pred CCccchHHHHHHHHHHHHhhCCeEEEcCCCCEEEEecCC---CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhh
Confidence 36788 899999999999999999999999999998764 48999999999995 11
Q ss_pred -------------------------------------------------------------C------------------
Q 016853 58 -------------------------------------------------------------G------------------ 58 (381)
Q Consensus 58 -------------------------------------------------------------g------------------ 58 (381)
|
T Consensus 98 ~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~ 177 (353)
T 1y0y_A 98 LIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFV 177 (353)
T ss_dssp TTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEE
T ss_pred ccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEE
Confidence 1
Q ss_pred --CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 59 --IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 59 --~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
+.|||+|++++|+++++|++ ++++|.++|+++||.+ ..|++.+.
T Consensus 178 gra~D~k~g~a~~l~a~~~l~~------~~~~i~~~~~~~EE~g-----~~G~~~~~ 223 (353)
T 1y0y_A 178 SIAFDDRIAVYTILEVAKQLKD------AKADVYFVATVQEEVG-----LRGARTSA 223 (353)
T ss_dssp ETTHHHHHHHHHHHHHHHHCCS------CSSEEEEEEESCCTTT-----SHHHHHHH
T ss_pred eccCccHHHHHHHHHHHHHhhc------CCCeEEEEEECCcccc-----hhHHHHHh
Confidence 37999999999999988763 4689999999999984 46887663
No 43
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.33 E-value=8e-12 Score=117.04 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=81.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcC------------CCCEEEEecCCCCCCCeEEEeecccCCcCC------------
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~------------~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~------------ 57 (381)
|....++++||.+.|+++|++++.+. ..|++++++|.. .+.|+|.+|||++|.+
T Consensus 44 S~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~--~~~i~l~aH~Ds~~~~~~~~~~~~~~~~ 121 (309)
T 4fuu_A 44 TKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPES--KKRIALFAHWDTRPWADNDADEKNHHTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCC--CceEEEEeecCCCCCCCCccccccccCC
Confidence 67788999999999999999987542 138999999864 4899999999999753
Q ss_pred --CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 58 --g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
|+.|+-+|+|++|++++.|++. .++++|.|+|..+||.+
T Consensus 122 ~~GA~D~aSG~a~lLE~ar~l~~~----~~~~~i~~~~~~~EE~G 162 (309)
T 4fuu_A 122 ILGANDGASGVGALLEIARLVNQQ----QPELGIDIIFLDAEDYG 162 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSSSCC
T ss_pred cCCcccCchhHHHHHHHHHHHhhc----CCCCceEEEeecccccC
Confidence 8889999999999999999886 57899999999999975
No 44
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.31 E-value=6.6e-12 Score=117.78 Aligned_cols=109 Identities=22% Similarity=0.273 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCC------------CCEEEEecCCCCCCCeEEEeecccCCcC------CCCCcCh
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHL------------GNVHGRVEGLNASAQALLIGSHLDTVVD------AGIFDGS 63 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~------------gnv~a~~~g~~~~~~~i~l~~H~DtVp~------~g~~D~k 63 (381)
|+...++++||.++|+++|++++.+.. .||+++++|.. .+.|++.+|+|+++. .|+.|+.
T Consensus 28 s~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~--~~~vvl~aHyDs~~~~~~~~~~GA~Dna 105 (312)
T 4f9u_A 28 SRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQA--QNFLALACHYDSKYFPNDPGFVGATDSA 105 (312)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTS--SEEEEEEEECCCCCCTTCTTCCCTTTTH
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCC--CceEEEEEEEecCCCCCCCCCCCccCCc
Confidence 567889999999999999999876531 38999999864 489999999999864 2889999
Q ss_pred HHHHHHHHHHHHHHhc-----CCCCCCCCCEEEEEeccccCCCCC---CCCcchHHHhc
Q 016853 64 LGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAG 114 (381)
Q Consensus 64 ~giaa~l~a~~~l~~~-----~~~~~~~~~i~~~~~~~EE~~~~~---~~~~Gs~~l~~ 114 (381)
+|+|++|++++.|.+. +. .++++|.|++..+||.+.++ .++.||++++.
T Consensus 106 SGvA~lLElAR~l~~~~~~~~~~--~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~ 162 (312)
T 4f9u_A 106 VPCAILLNTAKTLGAYLQKEFRN--RSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAA 162 (312)
T ss_dssp HHHHHHHHHHHHTHHHHTTGGGS--CSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhccC--CCCceEEEEEecCccccccCCccccccChHHHHH
Confidence 9999999999999652 32 58899999999999986433 23789999863
No 45
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.25 E-value=1.1e-11 Score=117.83 Aligned_cols=104 Identities=19% Similarity=0.210 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcC--------C---------------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD--------A--------------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~--------~--------------- 57 (381)
+|+.|.++++||.++|+++|+++++|..||++++++|..+++|+|+|.||||+|+- |
T Consensus 18 ~SG~E~~v~~~l~~~l~~~g~~~~~D~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~ 97 (355)
T 3kl9_A 18 VSGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVV 97 (355)
T ss_dssp BTTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTC
T ss_pred CCCCHHHHHHHHHHHHHHhCCEEEECCCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCCEEEEEecCCcccccc
Confidence 48899999999999999999999999999999999876423699999999999841 0
Q ss_pred --------------------------------------------------------------------------------
Q 016853 58 -------------------------------------------------------------------------------- 57 (381)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (381)
T Consensus 98 ~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~ 177 (355)
T 3kl9_A 98 SSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNII 177 (355)
T ss_dssp SSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEE
T ss_pred CCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEE
Confidence
Q ss_pred -CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 58 -g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
.++|++.|++++|.+++.|++. .++.++.++|+..||.| ..|++...
T Consensus 178 s~~lDnr~g~~~~l~~l~~l~~~----~~~~~v~~~ft~qEEvG-----~~Ga~~a~ 225 (355)
T 3kl9_A 178 SKAWDNRYGVLMVSELAEALSGQ----KLGNELYLGSNVQEEVG-----LRGAHTST 225 (355)
T ss_dssp ESCHHHHHHHHHHHHHHHHHSSC----CCSSEEEEEEESCCTTT-----SHHHHHHH
T ss_pred eeccccHHHHHHHHHHHHHhhhc----CCCceEEEEEECccccC-----cchhHHHH
Confidence 1238999999999999999865 47899999999999995 46766553
No 46
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.24 E-value=1.7e-11 Score=116.57 Aligned_cols=101 Identities=20% Similarity=0.125 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCcC---------------C--------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD---------------A-------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp~---------------~-------- 57 (381)
+|++|.++++||.++|+++|++++++..+|+++.++|. +.|.|+|.||||||+. +
T Consensus 20 ~sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~--~~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~ 97 (346)
T 1vho_A 20 PSGYETNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGK--GIGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVY 97 (346)
T ss_dssp BTTCCHHHHHHHHHHHGGGCSEEEECTTSCEEEEECCS--SSCEEEEEEECCBCCEEEEEEETTEEEEEEC--------C
T ss_pred CCcchHHHHHHHHHHHHhhCCEEEEecCCcEEEEEcCC--CCceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccc
Confidence 47889999999999999999999999999999999775 2489999999999941 0
Q ss_pred --------------C---------------------------------------------------------CCcChHHH
Q 016853 58 --------------G---------------------------------------------------------IFDGSLGI 66 (381)
Q Consensus 58 --------------g---------------------------------------------------------~~D~k~gi 66 (381)
| +.|+|.|+
T Consensus 98 g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~ 177 (346)
T 1vho_A 98 ASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASC 177 (346)
T ss_dssp CCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHH
T ss_pred cCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHH
Confidence 0 26889999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHH
Q 016853 67 ITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (381)
Q Consensus 67 aa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l 112 (381)
++++.+++.|++.+ +++++.++|+.+||.+ ..|++..
T Consensus 178 aa~l~al~~l~~~~----~~~~~~~~~t~~EEvG-----~~Ga~~~ 214 (346)
T 1vho_A 178 GVLVKVLEFLKRYD----HPWDVYVVFSVQEETG-----CLGALTG 214 (346)
T ss_dssp HHHHHHHHHHTTCC----CSSEEEEEEECTTSSS-----HHHHHHT
T ss_pred HHHHHHHHHhhhcC----CCceEEEEEECCcccc-----hhhHHHH
Confidence 99999999998653 5689999999999984 3466544
No 47
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.24 E-value=1.8e-11 Score=116.48 Aligned_cols=101 Identities=22% Similarity=0.275 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCc----------------CC-------
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA------- 57 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp----------------~~------- 57 (381)
+|++|.++++||.++|+++|++++.|..+|++++++|. +.|+|+|.||||||+ -+
T Consensus 18 ~sg~e~~~~~~l~~~l~~~g~~v~~d~~gnlia~~~g~--~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~ 95 (348)
T 1ylo_A 18 IASSEQEVRQILLEEAARLQKEVRFDGLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAAR 95 (348)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCCEEECTTCCEEEECCCC--SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGS
T ss_pred CCCchHHHHHHHHHHHHhhCCEEEEecCCCEEEEecCC--CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhc
Confidence 37889999999999999999999999999999998775 358999999999995 00
Q ss_pred --------------------------------------------------C--------------------CCcChHHHH
Q 016853 58 --------------------------------------------------G--------------------IFDGSLGII 67 (381)
Q Consensus 58 --------------------------------------------------g--------------------~~D~k~gia 67 (381)
| +.|||.|++
T Consensus 96 ~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~a 175 (348)
T 1ylo_A 96 QLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCY 175 (348)
T ss_dssp SSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHH
T ss_pred cCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHH
Confidence 0 268999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHH
Q 016853 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (381)
Q Consensus 68 a~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l 112 (381)
+++.+++.|++. .++.++.++|+.+||.+ ..|++..
T Consensus 176 a~l~al~~l~~~----~~~~~~~~~~t~~EEvG-----~~Ga~~~ 211 (348)
T 1ylo_A 176 LLVTLLRELHDA----ELPAEVWLVASSSEEVG-----LRGGQTA 211 (348)
T ss_dssp HHHHHHHHHTTC----CCSSEEEEEEESCCTTS-----SHHHHHH
T ss_pred HHHHHHHHhhhc----CCCceEEEEEEcccccc-----hhHHHHh
Confidence 999999998765 35689999999999985 3566543
No 48
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.23 E-value=3e-11 Score=114.08 Aligned_cols=109 Identities=19% Similarity=0.216 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCC------------CCEEEEecCCCCCCCeEEEeecccCCcCC-----CCCcChH
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHL------------GNVHGRVEGLNASAQALLIGSHLDTVVDA-----GIFDGSL 64 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~------------gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-----g~~D~k~ 64 (381)
|+...++++||.+.|+++|++++.+.. -|++++++|.. .+.|++.+|+|+++.. |+.|+-+
T Consensus 55 s~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~--~~~i~l~aHyDs~~~~~~~~~GA~Dnas 132 (330)
T 4fai_A 55 TTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNA--ERYLVLSCHYDSKYMPGVEFLGATDSAV 132 (330)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTC--SEEEEEEEECCCCCCTTSCCCCTTTTHH
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCC--CcEEEEEEeecccccccCCCCCCCCccH
Confidence 677889999999999999999876531 38999998863 4789999999998743 8899999
Q ss_pred HHHHHHHHHHHHHhc---CCCCCCCCCEEEEEeccccCCCCC---CCCcchHHHhc
Q 016853 65 GIITAISALKVLKST---GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAG 114 (381)
Q Consensus 65 giaa~l~a~~~l~~~---~~~~~~~~~i~~~~~~~EE~~~~~---~~~~Gs~~l~~ 114 (381)
|+|++|++++.|++. +. +++++|.|+|..+||.+-.+ .+++||++++.
T Consensus 133 G~A~lLE~Ar~l~~~~~~~~--~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~ 186 (330)
T 4fai_A 133 PCAMLLNLAQVLQEQLKPLK--KSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAK 186 (330)
T ss_dssp HHHHHHHHHHHTHHHHGGGG--TSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhccC--CCCccEEEEEeccccccccccccchhhhhHHHHh
Confidence 999999999999653 33 68899999999999985311 12579998863
No 49
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.19 E-value=4.4e-11 Score=116.79 Aligned_cols=99 Identities=24% Similarity=0.345 Sum_probs=80.2
Q ss_pred HHHHHHHHH---HH--cCCEEEEcC-----CCCEEEEecCCCC---CCCeEEEeecccCCcCC-CCCcChHHHHHHHHHH
Q 016853 8 AGNLIRQWM---ED--AGLRTWVDH-----LGNVHGRVEGLNA---SAQALLIGSHLDTVVDA-GIFDGSLGIITAISAL 73 (381)
Q Consensus 8 ~~~~l~~~l---~~--~G~~~~~~~-----~gnv~a~~~g~~~---~~~~i~l~~H~DtVp~~-g~~D~k~giaa~l~a~ 73 (381)
.+++|.+++ ++ .++++..+. ..|++++++|+.+ ..+.|++.+|+|+|+.+ |+.|+++|++++|+++
T Consensus 173 ~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~ 252 (421)
T 2ek8_A 173 EGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELA 252 (421)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHH
Confidence 466788888 33 344444444 5699999998532 35899999999999988 9999999999999999
Q ss_pred HHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhcc
Q 016853 74 KVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (381)
Q Consensus 74 ~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~ 115 (381)
+.|++. .++++|.|+++.+||. |+.||+.+...
T Consensus 253 ~~l~~~----~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~ 285 (421)
T 2ek8_A 253 RVMSKL----KTDTELRFITFGAEEN-----GLIGSKKYAAS 285 (421)
T ss_dssp HHHTTS----CCSSEEEEEEESSSTT-----TSHHHHHHHTT
T ss_pred HHHhcc----CCCceEEEEEECCccc-----cchhHHHHHHh
Confidence 999875 5789999999999998 46899998743
No 50
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.09 E-value=3.8e-11 Score=113.00 Aligned_cols=93 Identities=19% Similarity=0.086 Sum_probs=76.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcC-------CCCEEEEecCCCCCCCeEEEeecccCCc-----------CCC----
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVV-----------DAG---- 58 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~-------~gnv~a~~~g~~~~~~~i~l~~H~DtVp-----------~~g---- 58 (381)
+|++|.++++||.++|+++|+++++|. .+|+++.++| + |+|+|.||||||+ -||
T Consensus 32 ~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g---~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~ 107 (321)
T 3cpx_A 32 PSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG---N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAK 107 (321)
T ss_dssp BTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES---S-CSEEEEEECCBCEEEECSTTBEEEESSCCCC
T ss_pred CCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC---C-ceEEEEecCCcCCeEecccCCeEEcCChhhc
Confidence 478899999999999999999988887 8999999876 3 7899999999993 111
Q ss_pred -------------------------------------------------------CCcChHHHHHHHHHHHHHHhcCCCC
Q 016853 59 -------------------------------------------------------IFDGSLGIITAISALKVLKSTGKLG 83 (381)
Q Consensus 59 -------------------------------------------------------~~D~k~giaa~l~a~~~l~~~~~~~ 83 (381)
+.|||+|++++|.+++.|
T Consensus 108 ~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l------- 180 (321)
T 3cpx_A 108 EGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWTALELAKTL------- 180 (321)
T ss_dssp TTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTC-------
T ss_pred ccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHh-------
Confidence 479999999999986542
Q ss_pred CCCCCEEEEEeccccCCCCCCCCcchHHH
Q 016853 84 KLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (381)
Q Consensus 84 ~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l 112 (381)
. + +.++|+.+||.+ ..|++..
T Consensus 181 ~-~--i~~~~t~~EEvG-----~~Ga~~a 201 (321)
T 3cpx_A 181 E-H--GIIAFTCWEEHG-----GGSVAYL 201 (321)
T ss_dssp C-S--EEEEEESSTTTT-----CCSHHHH
T ss_pred c-C--cEEEEECCccCc-----hhcchhh
Confidence 2 2 889999999985 4677753
No 51
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.02 E-value=3.2e-10 Score=107.71 Aligned_cols=52 Identities=19% Similarity=0.355 Sum_probs=47.9
Q ss_pred CCHHHH-HHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCCc
Q 016853 1 MSPASV-RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (381)
Q Consensus 1 ~s~~E~-~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtVp 55 (381)
+|+.|. ++++||.++|+++|+++++|..||++++++|+ +|+|+|.||||+|+
T Consensus 24 pSG~E~~~v~~~l~~~l~~~g~~~~~D~~GNvi~~~~g~---~~~v~l~aHmDtVg 76 (354)
T 2vpu_A 24 VSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIG 76 (354)
T ss_dssp BTTCGGGTHHHHHHHHHHTTCSEEEECTTCCEEEEECCS---SSEEEEECCCCBCE
T ss_pred CCcccHHHHHHHHHHHHHHhCCEEEEcCCCeEEEEEcCC---CCEEEEEecccccc
Confidence 478999 99999999999999999999999999999774 28999999999984
No 52
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.02 E-value=3.6e-10 Score=110.99 Aligned_cols=79 Identities=29% Similarity=0.430 Sum_probs=70.9
Q ss_pred CCEEEEecCCCCCCCeEEEeecccCCcCC-CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCc
Q 016853 29 GNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107 (381)
Q Consensus 29 gnv~a~~~g~~~~~~~i~l~~H~DtVp~~-g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~ 107 (381)
.|++++++|..+..+.|++.+|+|+|+.+ |+.|+++|++++|++++.|++.+. +++++|.|+++.+||.+ +.
T Consensus 236 ~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~--~~~~~i~f~~~~~EE~g-----l~ 308 (444)
T 3iib_A 236 YNVIAEVKGSTKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQ--KPERTIRVVLYAAEELG-----LL 308 (444)
T ss_dssp EEEEEEECCSTEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSS--CCSEEEEEEEESCGGGT-----SH
T ss_pred EEEEEEEeCCCCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCC--CCCCeEEEEEECCcccC-----Cc
Confidence 59999999875335899999999999986 999999999999999999999886 78999999999999984 68
Q ss_pred chHHHhc
Q 016853 108 GSAALAG 114 (381)
Q Consensus 108 Gs~~l~~ 114 (381)
||+++..
T Consensus 309 Gs~~~~~ 315 (444)
T 3iib_A 309 GGKTYAK 315 (444)
T ss_dssp HHHHHHH
T ss_pred CHHHHHH
Confidence 9998864
No 53
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.92 E-value=2.9e-09 Score=100.52 Aligned_cols=51 Identities=20% Similarity=0.247 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCCEEEEecCCCCCCCeEEEeecccCC
Q 016853 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTV 54 (381)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnv~a~~~g~~~~~~~i~l~~H~DtV 54 (381)
+|+.|.++++||.++|+++|+++++|+.||+++++ |. ++|+|+|.||||+|
T Consensus 26 pSG~E~~v~~~i~~~l~~~~~e~~~D~~Gnvi~~~-g~--~~~~v~l~aHmDev 76 (343)
T 3isx_A 26 PSGREEEVRSIILEELEGHIDGHRIDGLGNLIVWK-GS--GEKKVILDAHIDEI 76 (343)
T ss_dssp BTTCCHHHHHHHHHHHTTTCSEEEECTTCCEEEEE-CC--CSSEEEEEEECCBC
T ss_pred CCCchHHHHHHHHHHHHHhCCEEEECCCCCEEEEE-CC--CCCEEEEEeccccc
Confidence 58899999999999999999999999999999998 43 46999999999998
No 54
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.67 E-value=2.8e-08 Score=102.08 Aligned_cols=79 Identities=23% Similarity=0.335 Sum_probs=68.8
Q ss_pred CCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHh---cCCCCCCCCCEEEEEeccccCCCCCC
Q 016853 28 LGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKS---TGKLGKLKRPVEVIAFSDEEGVRFQS 104 (381)
Q Consensus 28 ~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~---~~~~~~~~~~i~~~~~~~EE~~~~~~ 104 (381)
..||+++++|..+..+.|++.+|+|+++.| +.|+..|++++|++++.|++ .|+ +++++|.|+++.+||.
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~G-a~D~~sG~a~lLe~ar~l~~~~~~g~--~p~r~I~f~~~~~EE~----- 383 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVFG-AIDPTSGVAVLQEIARSFGKLMSKGW--RPRRTIIFASWDAEEF----- 383 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSSC-TTTTHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGG-----
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCCC-CccCcHHHHHHHHHHHHHHhhhhccC--CCCCCEEEEEeCCccc-----
Confidence 369999999975235899999999999975 68999999999999999875 577 7999999999999998
Q ss_pred CCcchHHHhc
Q 016853 105 TFLGSAALAG 114 (381)
Q Consensus 105 ~~~Gs~~l~~ 114 (381)
|+.||+.+..
T Consensus 384 Gl~GS~~~~~ 393 (707)
T 3fed_A 384 GLLGSTEWAE 393 (707)
T ss_dssp TSHHHHHHHH
T ss_pred cchhHHHHHH
Confidence 4789999875
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.55 E-value=9.7e-08 Score=97.09 Aligned_cols=80 Identities=14% Similarity=0.236 Sum_probs=68.4
Q ss_pred CCCEEEEecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhc----CCCCCCCCCEEEEEeccccCCCCC
Q 016853 28 LGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST----GKLGKLKRPVEVIAFSDEEGVRFQ 103 (381)
Q Consensus 28 ~gnv~a~~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~----~~~~~~~~~i~~~~~~~EE~~~~~ 103 (381)
..||+++++|+....+.|++.+|+|++.+ |+.|+.+|++++|+++++|++. |. +|+++|.|+++.+||.
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-Ga~D~~sG~a~lLe~ar~l~~~~~~~g~--~p~r~I~f~~~~~EE~---- 338 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGP-GAAKSGVGTALLLKLAQMFSDMVLKDGF--QPSRSIIFASWSAGDF---- 338 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSC-CTTTTHHHHHHHHHHHHHHHHHHHTSCC--CCSEEEEEEEESSGGG----
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCC-CCCcCcHHHHHHHHHHHHHHHhhhhcCC--CCCCcEEEEEECCccc----
Confidence 36999999997322478999999999954 6889999999999999999864 66 7999999999999998
Q ss_pred CCCcchHHHhcc
Q 016853 104 STFLGSAALAGI 115 (381)
Q Consensus 104 ~~~~Gs~~l~~~ 115 (381)
|+.||+.++..
T Consensus 339 -gl~GS~~~~~~ 349 (640)
T 3kas_A 339 -GSVGATEWLEG 349 (640)
T ss_dssp -TSHHHHHHHHH
T ss_pred -CchhHHHHHHh
Confidence 47999988753
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=95.90 E-value=0.019 Score=54.59 Aligned_cols=62 Identities=18% Similarity=0.131 Sum_probs=51.0
Q ss_pred ecCCCCCCCeEEEeecccCCcCCCCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHh
Q 016853 35 VEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (381)
Q Consensus 35 ~~g~~~~~~~i~l~~H~DtVp~~g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~ 113 (381)
++|.. .+.|+|.+|+|+ ++++.|+-+|+|.+++.+++|++. .++.++.|+|.+ |. .||..++
T Consensus 174 ipG~t--~~~IllsaH~cH--P~~ANDNaSG~a~lleLar~l~~~----~~~~t~rFvf~p--g~-------iGS~~yl 235 (435)
T 3k9t_A 174 IRGEL--EEEILLTTYTCH--PSMCNDNLSGVALITFIAKALSKL----KTKYSYRFLFAP--ET-------IGSITWL 235 (435)
T ss_dssp ECCSS--SCEEEEEEECCC--CSCTTTTHHHHHHHHHHHHHHTTS----CCSSEEEEEEEC--TT-------HHHHHHH
T ss_pred ecCCC--CCEEEEEEEcCC--CCCCCccchHHHHHHHHHHHHhcC----CCCceEEEEEcC--cc-------HHHHHHH
Confidence 48863 499999999997 346889999999999999999864 578999999998 22 4898775
No 57
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=94.95 E-value=0.014 Score=42.97 Aligned_cols=44 Identities=7% Similarity=-0.019 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEeeC
Q 016853 325 DLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRLN 377 (381)
Q Consensus 325 ~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~~~ 377 (381)
++++.+.++++++ |.. +....++|+||+++|+.. +|++ .|.|..
T Consensus 2 ~~v~~l~~a~~~~-g~~-------~~~~~~~g~TDar~~~~~gip~v-~fGPg~ 46 (88)
T 1q7l_B 2 PWWAAFSRVCKDM-NLT-------LEPEIMPAAGDNRYIRAVGVPAL-GFSPMN 46 (88)
T ss_dssp HHHHHHHHHHHHT-TCC-------EEEEECCSCSHHHHHHHTTCCEE-EECCCC
T ss_pred hHHHHHHHHHHHc-CCe-------eEeeeeceeCcHHHHHHcCCCEE-EECCCC
Confidence 5789999999987 653 233345699999999887 7855 677764
No 58
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=90.65 E-value=0.12 Score=49.91 Aligned_cols=53 Identities=25% Similarity=0.334 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHHHHHHHcCC---------------EEEEcCC-CCEEEEecCCC--CCCCeEEEeecccCC
Q 016853 2 SPASVRAGNLIRQWMEDAGL---------------RTWVDHL-GNVHGRVEGLN--ASAQALLIGSHLDTV 54 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~---------------~~~~~~~-gnv~a~~~g~~--~~~~~i~l~~H~DtV 54 (381)
|+-+..+.+++.++|++.|| ++..+.. +|+++...|.. ++.+.+++.+|+|.+
T Consensus 15 ~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 15 SPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp THHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 56788999999999999999 3444555 78999876753 234799999999996
No 59
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=88.31 E-value=0.27 Score=47.78 Aligned_cols=52 Identities=13% Similarity=0.049 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCE-------------EEEcCCCCEEEEec-CCCC--CCCeEEEeecccCC
Q 016853 2 SPASVRAGNLIRQWMEDAGLR-------------TWVDHLGNVHGRVE-GLNA--SAQALLIGSHLDTV 54 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~-------------~~~~~~gnv~a~~~-g~~~--~~~~i~l~~H~DtV 54 (381)
|+-+.++.+++.++|++.||+ +..+..+|.++.+. |..+ ++.. ++.+|+|..
T Consensus 32 spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dsp 99 (458)
T 1y7e_A 32 FKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSP 99 (458)
T ss_dssp CCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcC
Confidence 445678999999999999986 55566678666654 5432 2345 999999996
No 60
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=87.70 E-value=0.6 Score=43.35 Aligned_cols=94 Identities=7% Similarity=0.080 Sum_probs=58.9
Q ss_pred CceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCccCCHHHHHHHHHHHHHHHhhccCCC
Q 016853 266 SNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGAT 345 (381)
Q Consensus 266 ~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~ 345 (381)
.|.++..+.+.+|+|.... .++ ... + .......|+.+.+ .. .....++.+++.+.+++++. |-
T Consensus 212 ~~~i~~~~~i~~D~~~~~~-~~~-~~~--~---~~~~~~~G~~i~~--~~--~~~~~~~~l~~~~~~~a~~~-gi----- 274 (348)
T 1ylo_A 212 TRAVSPDVAIVLDTACWAK-NFD-YGA--A---NHRQIGNGPMLVL--SD--KSLIAPPKLTAWIETVAAEI-GV----- 274 (348)
T ss_dssp HHHHCCSEEEEECCCCCSS-TTC-CST--T---CCCCTTSCCEEEE--EC--SSCBCCHHHHHHHHHHHHHH-TC-----
T ss_pred hcccCCCEEEEEeccccCC-CCC-CCc--c---ccccCCCCcEEEE--eC--CCCCCCHHHHHHHHHHHHHc-CC-----
Confidence 4677778889999998743 111 100 0 0001112444433 22 23457888999999999885 32
Q ss_pred Cccccc-ccCcccHHHHHHhh--h-cCeEEEEEeeCC
Q 016853 346 QHEIPV-IMSGAGHDAMAMSH--L-TKVCSLLCRLNN 378 (381)
Q Consensus 346 ~~~~~~-~~~~g~tD~~~~~~--~-~p~~~~~~~~~~ 378 (381)
++.. +.++++||+++++. . +|++++|+|++.
T Consensus 275 --~~~~~~~~~ggsDa~~~~~~~~gipt~~lg~~~~~ 309 (348)
T 1ylo_A 275 --PLQADMFSNGGTDGGAVHLTGTGVPTLVMGPATRH 309 (348)
T ss_dssp --CCEEEECSSCCCHHHHHHTSTTCCCEEEEECCCBS
T ss_pred --CeEEeecCCCcchHHHHHHhcCCCCEEEECcccCc
Confidence 2333 34679999999954 3 999999999764
No 61
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=83.92 E-value=1.5 Score=42.43 Aligned_cols=53 Identities=9% Similarity=0.103 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-------------EEcCC-CCEEEEecCCCCCCCeEEEeecccCC
Q 016853 2 SPASVRAGNLIRQWMEDAGLRT-------------WVDHL-GNVHGRVEGLNASAQALLIGSHLDTV 54 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~-------------~~~~~-gnv~a~~~g~~~~~~~i~l~~H~DtV 54 (381)
|+-+..+.+++.+.|++.||.- ..+.. +|++|...|..++.+.+++.+|+|.+
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 4557889999999999999952 11222 57998876653234799999999996
No 62
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=82.92 E-value=0.76 Score=42.64 Aligned_cols=89 Identities=9% Similarity=0.045 Sum_probs=53.8
Q ss_pred CCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCccCCHHHHHHHHHHHHHHHhhccCC
Q 016853 265 ASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGA 344 (381)
Q Consensus 265 ~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~ 344 (381)
..|.++..+.+.+|+|...+. ++ .. . .....+..+++ ++..++.+++.+.+++++. |.
T Consensus 214 ~~~~i~~~~~i~~D~~~~~~~-~~-~~-~-------~~~~~g~~i~~-------~~~~~~~l~~~~~~~a~~~-gi---- 271 (346)
T 1vho_A 214 GAYEINPDAAIVMDVTFASEP-PF-SD-H-------IELGKGPVIGL-------GPVVDRNLVQKIIEIAKKH-NV---- 271 (346)
T ss_dssp TTCCCCCSEEEEEEEECCCCT-TS-CC-C-------CCTTSCCEEEC-------STTSCHHHHHHHHHHHHHT-TC----
T ss_pred HhcccCCCEEEEeecccccCC-CC-Cc-c-------cccCCCceEEe-------CCcCCHHHHHHHHHHHHHC-CC----
Confidence 447777778899999987521 11 00 0 00111333333 3567889999999999884 32
Q ss_pred CCcccccccC-c-ccHHHHHHhh---hcCeEEEEEeeCC
Q 016853 345 TQHEIPVIMS-G-AGHDAMAMSH---LTKVCSLLCRLNN 378 (381)
Q Consensus 345 ~~~~~~~~~~-~-g~tD~~~~~~---~~p~~~~~~~~~~ 378 (381)
++..... + ++||+++++. .+|++++|+|++.
T Consensus 272 ---~~~~~~~~g~ggsDa~~~~~~~~gipt~~lg~~~~~ 307 (346)
T 1vho_A 272 ---SLQEEAVGGRSGTETDFVQLVRNGVRTSLISIPLKY 307 (346)
T ss_dssp ---CCEEESSCCC----CTTHHHHHTTCEEEEEEEECBS
T ss_pred ---CEEEEeCCCCCCchHHHHHHhCCCCcEEEEehhhcc
Confidence 2333333 5 8899999954 3999999999864
No 63
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=81.91 E-value=1.3 Score=41.54 Aligned_cols=52 Identities=12% Similarity=-0.034 Sum_probs=39.5
Q ss_pred CccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhh--h-cCeEEEEEeeCC
Q 016853 319 AVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH--L-TKVCSLLCRLNN 378 (381)
Q Consensus 319 ~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~--~-~p~~~~~~~~~~ 378 (381)
....++.+++.+.+++++. | ++...+.++||||++.+.. . +|++.+++|++.
T Consensus 263 ~~~~~~~l~~~l~~~a~~~-g-------Ip~q~~~~ggGtDa~~i~~a~~Gipt~~igvp~~~ 317 (355)
T 3kl9_A 263 GHLLLPGMKDFLLTTAEEA-G-------IKYQYYCGKGGTDAGAAHLKNGGVPSTTIGVCARY 317 (355)
T ss_dssp TEECCHHHHHHHHHHHHHT-T-------CCEEEEECSSCCTHHHHTTSTTCCCEEEEEEEEBS
T ss_pred CCCCCHHHHHHHHHHHHHc-C-------CCEEEECCCcchHHHHHHHhCCCCCEEEEccCcCC
Confidence 3456889999999999885 2 2233345678999999864 3 999999999875
No 64
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=81.87 E-value=1.6 Score=41.07 Aligned_cols=52 Identities=13% Similarity=0.163 Sum_probs=38.2
Q ss_pred CccCCHHHHHHHHHHHHHHHhhccCCCCccccc-ccCcccHHHHHH--hhh-cCeEEEEEeeCC
Q 016853 319 AVMCDADLSSQLKSASYAALKRMTGATQHEIPV-IMSGAGHDAMAM--SHL-TKVCSLLCRLNN 378 (381)
Q Consensus 319 ~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~-~~~~g~tD~~~~--~~~-~p~~~~~~~~~~ 378 (381)
++..++++++.+.+++++. |. .+.. ..++++||++++ +.. +|++.++.|.+.
T Consensus 270 ~~~~~~~l~~~l~~~a~~~-gi-------~~~~~~~~~ggtDa~~~~~~~~GiPtv~lg~~~~~ 325 (373)
T 1vhe_A 270 SMVSHKGLRDAVVATAEEA-GI-------PYQFDAIAGGGTDSGAIHLTANGVPALSITIATRY 325 (373)
T ss_dssp TEECCHHHHHHHHHHHHHH-TC-------CCEEEEETTCCCTHHHHTTSTTCCCEEEEEEEEBS
T ss_pred CCCCCHHHHHHHHHHHHHc-CC-------CeEEecCCCCCccHHHHHHhCCCCcEEEEcccccc
Confidence 3457888999999998876 32 2222 345688999999 454 999999888653
No 65
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=81.64 E-value=0.9 Score=40.57 Aligned_cols=46 Identities=13% Similarity=0.067 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhh-cCeEEEEEe
Q 016853 323 DADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCR 375 (381)
Q Consensus 323 ~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~~ 375 (381)
++.+++.+.+++++..|- .+....++|+||+++++.. +|++.+..|
T Consensus 190 ~~~l~~~l~~aa~~~~gi-------~~~~~~~gggtDa~~~~~~g~p~~~~~~~ 236 (269)
T 4h2k_A 190 PGKLLDSITSAIEETIGI-------TPKAETGGGTSDGRFIALMGAEVVEFGPL 236 (269)
T ss_dssp --HHHHHHHHHHHHHHSC-------CCEEECC--CHHHHHHHTTTCEEEECCSB
T ss_pred CcHHHHHHHHHHHHHhCC-------CCEEecCCCCchHHHHHhhCCCEEEEEeC
Confidence 456999999999886553 3445567899999999987 455544443
No 66
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=80.94 E-value=6.8 Score=38.14 Aligned_cols=90 Identities=11% Similarity=0.086 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHcCCEEEEcC--------C--------C--C----EEEEecCCCCCCCeEEEeecccCCcCCCC-----
Q 016853 7 RAGNLIRQWMEDAGLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSHLDTVVDAGI----- 59 (381)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~--------~--------g--n----v~a~~~g~~~~~~~i~l~~H~DtVp~~g~----- 59 (381)
..+++..+.+++.|+++++.. . | + +..+|.|..+..++|.|.|-==|.-.||-
T Consensus 218 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp~ 297 (515)
T 3kzw_A 218 TFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEAPIALVGKGITYDSGGYSIKTK 297 (515)
T ss_dssp HHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSCCCEEEEEEEEEEECCTTSCCCH
T ss_pred HHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCCCcEEEecCceEEecCCcCCCCc
Confidence 456777788888899987532 1 1 1 56666665444577777765333222322
Q ss_pred ---CcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 60 ---FDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 60 ---~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
.+|| +|-|+.+.+++++.+.+ ++.+|..++-..|=..
T Consensus 298 ~~M~~MK~DM~GAAaVlg~~~a~a~l~----lpvnv~~~i~~~ENm~ 340 (515)
T 3kzw_A 298 NGMATMKFDMCGAANVVGIIEAASRLQ----LPVNIVGVLACAENMI 340 (515)
T ss_dssp HHHTTGGGGGHHHHHHHHHHHHHHHTT----CSCEEEEEEEEEEECC
T ss_pred cChhhchhchHHHHHHHHHHHHHHHcC----CCceEEEEEEeeccCC
Confidence 2444 77888999999999885 6799998888888764
No 67
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=79.69 E-value=10 Score=36.93 Aligned_cols=90 Identities=7% Similarity=-0.060 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHcCCEEEEcC--------C--------C--C----EEEEecCCCCCCCeEEEeecccCCcCCCCC----
Q 016853 7 RAGNLIRQWMEDAGLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSHLDTVVDAGIF---- 60 (381)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~--------~--------g--n----v~a~~~g~~~~~~~i~l~~H~DtVp~~g~~---- 60 (381)
..+++..+.+++.|+++++.. + | + +..+|.|.++..++|.|.|-==|.-.||-.
T Consensus 225 ~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~~iaLVGKGITFDSGGlsLKp~ 304 (522)
T 4efd_A 225 TFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVKKVSLVGKGIVYDCGGLALKPA 304 (522)
T ss_dssp HHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSEEEEEEEEEEETCCCCSSSCHH
T ss_pred HHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCCcEEEecCceEeecCCccCCCc
Confidence 467788888889999987532 1 1 1 556666554335677777654333333321
Q ss_pred ----cCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 61 ----DGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 61 ----D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
.|| +|-|+.+.+++++.+.+ ++.+|..++-..|=..
T Consensus 305 ~~M~~MK~DMgGAAaVlga~~a~a~l~----lpvnV~~vl~~~ENm~ 347 (522)
T 4efd_A 305 DYMKLMKHDMGGAAAVFCGFLTAVRLQ----QPVQLSCTLCLAENAI 347 (522)
T ss_dssp HHHHHGGGTTHHHHHHHHHHHHHHHHT----CSEEEEEEEEEEECCC
T ss_pred cchhhcccccchHHHHHHHHHHHHHcC----CCceEEEEEEEeccCC
Confidence 233 67778899999998874 6789998888887754
No 68
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=78.84 E-value=1.9 Score=40.09 Aligned_cols=51 Identities=20% Similarity=0.282 Sum_probs=37.4
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCccccc-ccCcccHHHHHH--hhh-cCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPV-IMSGAGHDAMAM--SHL-TKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~-~~~~g~tD~~~~--~~~-~p~~~~~~~~~~ 378 (381)
...++++++.+.+++++. |. ++.. ..++++||++++ +.. +|++.++.|.+.
T Consensus 267 ~~~~~~l~~~l~~~a~~~-gi-------~~~~~~~~~ggsDa~~~~~~~~GiPtv~lg~~~~~ 321 (353)
T 1y0y_A 267 VICHPTIVRWLEELAKKH-EI-------PYQLEILLGGGTDAGAIHLTKAGVPTGALSVPARY 321 (353)
T ss_dssp EECCHHHHHHHHHHHHHT-TC-------CEEEEECSSCCCTHHHHTTSTTCCCEEEEEEEEBS
T ss_pred CCCCHHHHHHHHHHHHHc-CC-------CEEEeecCCCCchHHHHHHhCCCCcEEEEcccccc
Confidence 446888999999998875 32 2222 345688999999 554 999999988653
No 69
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=78.68 E-value=10 Score=36.79 Aligned_cols=90 Identities=12% Similarity=0.091 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHc-CCEEEEcC--------C--------C--C----EEEEecCCCCCCCeEEEeecccCC--------c
Q 016853 7 RAGNLIRQWMEDA-GLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSHLDTV--------V 55 (381)
Q Consensus 7 ~~~~~l~~~l~~~-G~~~~~~~--------~--------g--n----v~a~~~g~~~~~~~i~l~~H~DtV--------p 55 (381)
..+++..+.++.. |+++++.+ + | + +..+|.|..+..++|.|.|-==|. |
T Consensus 201 ~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp 280 (497)
T 3h8g_F 201 FLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKADKPFVLVGKGITFDTGGISLKP 280 (497)
T ss_dssp HHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTTSCCEEEEEEEEEEECCTTSCCC
T ss_pred HHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCCCCcEEEEcCceEeccCCccCCC
Confidence 4677888888888 99987532 1 1 1 566676644445777777653222 2
Q ss_pred CCCCCcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 56 DAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 56 ~~g~~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
..+=.+|| +|-|+.+.+++++.+.+ ++.+|+.++-..|=..
T Consensus 281 ~~~M~~Mk~DM~GAAaV~g~~~a~a~l~----l~vnv~~~i~~~ENm~ 324 (497)
T 3h8g_F 281 GAGMDEMKYDMCGAASVFGTLRAVLELQ----LPVNLVCLLACAENMP 324 (497)
T ss_dssp STTGGGGGGTTHHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEECC
T ss_pred ccchhhccccchHHHHHHHHHHHHHHcC----CCeEEEEEEEeeccCC
Confidence 22223444 77888999999999885 6799999988888764
No 70
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=78.22 E-value=1.8 Score=40.27 Aligned_cols=51 Identities=8% Similarity=0.077 Sum_probs=36.7
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCccccc-ccCcccHHHHHHhh--h-cCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPV-IMSGAGHDAMAMSH--L-TKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~-~~~~g~tD~~~~~~--~-~p~~~~~~~~~~ 378 (381)
...|+.+++.+.+++++. | +++.. +.++||||++.+.. . +|++.+++|++.
T Consensus 263 ~~~d~~l~~~l~~~A~~~-g-------Ip~Q~~v~~ggGTDa~~i~~a~~Gipt~~Igvp~r~ 317 (343)
T 3isx_A 263 SISSKRILENLIEIAEKF-D-------IKYQMEVLTFGGTNAMGYQRTREGIPSATVSIPTRY 317 (343)
T ss_dssp CHHHHHHHHHHHHHHHHT-T-------CCCEECCCBCCCSSHHHHHHHTSSCCEEEEEEEEBS
T ss_pred CCCCHHHHHHHHHHHHHC-C-------CCeEEecCCCCchHHHHHHHhcCCCCEEEEcccccc
Confidence 335778889988888875 2 22332 23468999988754 3 999999999875
No 71
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=76.16 E-value=1.5 Score=40.34 Aligned_cols=52 Identities=23% Similarity=0.298 Sum_probs=38.7
Q ss_pred CccCCHHHHHHHHHHHHHHHhhccCCCCcccccccCcccHHHHHHhhhcCeEEEEEeeCC
Q 016853 319 AVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 378 (381)
Q Consensus 319 ~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~~~~~ 378 (381)
.+..++++++.+.+++++. |. .+....++++||+++++..+|++.++.|.+.
T Consensus 254 ~~~~~~~l~~~l~~~~~~~-gi-------~~~~~~~~ggtDa~~~~~GiPtv~lg~~~~~ 305 (332)
T 2wyr_A 254 SAIYSRDLARKVWSIAEKN-GI-------EIQIGVTGGGTDASAFQDRSKTLALSVPIKY 305 (332)
T ss_dssp SCBCCHHHHHHHHHHHHHT-TC-------CCEEEECSSCCGGGGGTTTSEEEEEECEEBS
T ss_pred CCCCCHHHHHHHHHHHHHc-CC-------CeEEecCCCCchHHHHHcCCCEEEEcCCcCC
Confidence 3556888999999988875 42 2333345688999998878999998888653
No 72
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=75.97 E-value=11 Score=36.61 Aligned_cols=90 Identities=14% Similarity=0.054 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHc-CCEEEEcC--------C--------C--C----EEEEecCCCCCCCeEEEeecccCCcCCC-----
Q 016853 7 RAGNLIRQWMEDA-GLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSHLDTVVDAG----- 58 (381)
Q Consensus 7 ~~~~~l~~~l~~~-G~~~~~~~--------~--------g--n----v~a~~~g~~~~~~~i~l~~H~DtVp~~g----- 58 (381)
..+++..+.++.. |+++++.+ + | + +..+|.|..+..++|.|.|-==|.-.||
T Consensus 185 ~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp 264 (486)
T 3pei_A 185 YMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEGDAPIVLVGKGLVFDNGGICIKQ 264 (486)
T ss_dssp HHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTTSCCEEEEEEEEETEECC-----
T ss_pred HHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCCCCcEEEEccceEEecCCcccCC
Confidence 4677788888888 89887532 1 1 1 5666666444457777776533332222
Q ss_pred ---CCcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 59 ---IFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 59 ---~~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
=.+|| +|-|+.+.+++++.+.+ ++.+|+.+.-..|=..
T Consensus 265 ~~~M~~Mk~DM~GAAaVlg~~~a~a~l~----l~vnv~~~i~~~ENm~ 308 (486)
T 3pei_A 265 AAGMDSMKMDMGGVAAVMGTMKAIAMLN----LPVNVVGVMGLAENAV 308 (486)
T ss_dssp -------EECSHHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEC--
T ss_pred ccchhhhhccchHHHHHHHHHHHHHHcC----CCcEEEEEEEeeccCC
Confidence 22343 77888999999999885 6799999888888764
No 73
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=75.30 E-value=14 Score=36.04 Aligned_cols=90 Identities=16% Similarity=0.087 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHcC--CEEEEcC--------C--------C--C----EEEEecCCCC-CCCeEEEeecccCC-------
Q 016853 7 RAGNLIRQWMEDAG--LRTWVDH--------L--------G--N----VHGRVEGLNA-SAQALLIGSHLDTV------- 54 (381)
Q Consensus 7 ~~~~~l~~~l~~~G--~~~~~~~--------~--------g--n----v~a~~~g~~~-~~~~i~l~~H~DtV------- 54 (381)
..+++..+.+++.| +++++.+ + | + +..+|.|..+ ..++|.|.|-==|.
T Consensus 202 ~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~~~~~~i~LVGKGITFDsGGisl 281 (503)
T 1gyt_A 202 YLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISI 281 (503)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCCTTCCCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCCCCCCcEEEEcCceEecCCCccc
Confidence 46677888888889 9887532 1 1 1 5666766432 24677777653222
Q ss_pred -cCCCCCcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 55 -VDAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 55 -p~~g~~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
|..+=.+|| +|-|+.+.+++++.+.+ ++.+|+.++-..|=..
T Consensus 282 Kp~~~M~~MK~DM~GAAaVlg~~~aia~l~----l~vnV~~~i~~~ENm~ 327 (503)
T 1gyt_A 282 KPSEGMDEMKYDMCGAAAVYGVMRMVAELQ----LPINVIGVLAGCENMP 327 (503)
T ss_dssp CCSTTGGGGGGGGHHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEECC
T ss_pred cCCcChhhcccccchHHHHHHHHHHHHHcC----CCeeEEEEEEeeccCC
Confidence 222223454 78889999999999885 6799999988888764
No 74
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=72.69 E-value=19 Score=34.94 Aligned_cols=90 Identities=17% Similarity=0.086 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHcC--CEEEEcC--------C--------C--C----EEEEecCCC-CCCCeEEEeecccCC-------
Q 016853 7 RAGNLIRQWMEDAG--LRTWVDH--------L--------G--N----VHGRVEGLN-ASAQALLIGSHLDTV------- 54 (381)
Q Consensus 7 ~~~~~l~~~l~~~G--~~~~~~~--------~--------g--n----v~a~~~g~~-~~~~~i~l~~H~DtV------- 54 (381)
..+++..+.+++.| +++++.. + | + +..+|.|.. +..++|.|.|-==|.
T Consensus 182 ~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~~~i~LVGKGITFDsGG~sl 261 (484)
T 1lam_A 182 KFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPNASEPPLVFVGKGITFDSGGISI 261 (484)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSSTTSCCEEEEECEEEEECCTTSC
T ss_pred HHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCCCCCCCcEEEEecceEEcCCCcCC
Confidence 45677888888889 8887532 1 1 1 556665543 223557776643222
Q ss_pred -cCCCCCcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 55 -VDAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 55 -p~~g~~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
|..+=..|| +|-|+.+.+++++.+.+ ++.+|+.++-..|=..
T Consensus 262 Kp~~~M~~MK~DMgGAAaVlg~~~aia~l~----l~vnv~~~i~~~ENm~ 307 (484)
T 1lam_A 262 KAAANMDLMRADMGGAATICSAIVSAAKLD----LPINIVGLAPLCENMP 307 (484)
T ss_dssp CCSTTGGGGGGTTHHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEECC
T ss_pred cCccchhhhhccchHHHHHHHHHHHHHHcC----CCeeEEEEEEeeccCC
Confidence 222223454 77889999999999875 6799999888888764
No 75
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=72.56 E-value=3.5 Score=38.48 Aligned_cols=51 Identities=14% Similarity=0.055 Sum_probs=37.1
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCCCcccccc-cCc-ccHHHHHHhh--h-cCeEEEEEeeCC
Q 016853 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVI-MSG-AGHDAMAMSH--L-TKVCSLLCRLNN 378 (381)
Q Consensus 320 ~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~~-~~~-g~tD~~~~~~--~-~p~~~~~~~~~~ 378 (381)
...|+.+++.+.+++++. | +++... ..+ ||||++.+.. . +|++.+++|++.
T Consensus 265 ~~~~~~l~~~l~~~a~~~-g-------Ip~q~~~~~g~gGtDa~~i~~a~~Gipt~~Igvp~~~ 320 (354)
T 2vpu_A 265 PNINPKLRAFADEVAKKY-E-------IPLQVEPSPRPTGTDANVMQINKEGVATAVLSIPIRY 320 (354)
T ss_dssp TTSCHHHHHHHHHHHHHT-T-------CCCEEEECCSCCSSTHHHHHTSTTCCEEEEEEEEEBS
T ss_pred CCCCHHHHHHHHHHHHHc-C-------CCcEEEeCCCCCccHHHHHHHhcCCCCEEEECccccc
Confidence 346888999999999875 2 223322 244 7899999854 3 999999999875
No 76
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=71.04 E-value=1 Score=43.69 Aligned_cols=49 Identities=16% Similarity=0.228 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHcCCEEEE------------------cCCCC-EEEEecCCCC-CCCeEEEeecccCC
Q 016853 5 SVRAGNLIRQWMEDAGLRTWV------------------DHLGN-VHGRVEGLNA-SAQALLIGSHLDTV 54 (381)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~------------------~~~gn-v~a~~~g~~~-~~~~i~l~~H~DtV 54 (381)
+..+.+++.++|++.||+ +. +..+| +++...|..+ ..+.+++.+|+|.+
T Consensus 37 ~~hav~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 37 ERECVTELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp CSSTHHHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 446788899999999997 21 12256 7777666431 12459999999996
No 77
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=70.21 E-value=8.4 Score=37.45 Aligned_cols=49 Identities=22% Similarity=0.163 Sum_probs=41.5
Q ss_pred CeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcC
Q 016853 251 SLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS 306 (381)
Q Consensus 251 ~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~ 306 (381)
.+++|++.++.. ++++++.+++|+++..+.+++.++++++++.......
T Consensus 347 ~~S~n~gv~~~~-------~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~~ 395 (490)
T 3mru_A 347 ETSLNVGVITTE-------ENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIE 395 (490)
T ss_dssp EEEEEEEEEEEE-------TTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred eEEEEEEEEEEe-------CCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeEE
Confidence 678898888874 6889999999999999999999999999887544333
No 78
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=68.76 E-value=3.7 Score=37.98 Aligned_cols=49 Identities=20% Similarity=0.158 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCccccc-ccCcccHHHHHHhh--h-cCeEEEEEeeCC
Q 016853 322 CDADLSSQLKSASYAALKRMTGATQHEIPV-IMSGAGHDAMAMSH--L-TKVCSLLCRLNN 378 (381)
Q Consensus 322 ~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~-~~~~g~tD~~~~~~--~-~p~~~~~~~~~~ 378 (381)
.++.+++.+.+++++. |- .... +.++++||++.++. . +|++++++|++.
T Consensus 267 ~~~~l~~~l~~~a~~~-gi-------~~q~~~~~ggGsDa~~~~~~~~GiPt~~lg~~~~~ 319 (349)
T 2gre_A 267 YHYALRKHLVELAKTN-HI-------EYKVDIYPYYGSDASAAIRAGFDVKHALIGAGIDS 319 (349)
T ss_dssp CCHHHHHHHHHHHHHH-TC-------CEEEEECSCC--------CCSSSCEEEEEEECCBS
T ss_pred CCHHHHHHHHHHHHHc-CC-------CcEEeccCCCCccHHHHHHhCCCCcEEEeccCccc
Confidence 5788899999888876 32 2222 34678999998853 4 999999998764
No 79
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=67.64 E-value=25 Score=34.07 Aligned_cols=89 Identities=16% Similarity=0.132 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHc-CCEEEEcC--------C--------C--C----EEEEecCCCCCCCeEEEeecccCC--------c
Q 016853 7 RAGNLIRQWMEDA-GLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSHLDTV--------V 55 (381)
Q Consensus 7 ~~~~~l~~~l~~~-G~~~~~~~--------~--------g--n----v~a~~~g~~~~~~~i~l~~H~DtV--------p 55 (381)
..+++..+.+++. |+++++.+ + | + +..+|.|.. ..++|.|.|-==|. |
T Consensus 197 ~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~-~~~~i~LVGKGiTFDsGG~slKp 275 (490)
T 3jru_B 197 YLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGG-DARPYVLVGKGITFDTGGVNLKT 275 (490)
T ss_dssp HHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTT-TSCCEEEEECEEEEECCTTSCCC
T ss_pred HHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCC-CCCcEEEEcCeeEecCCCccCCC
Confidence 4567777888777 89887532 1 1 1 566666654 45677777653222 2
Q ss_pred CCCCCcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 56 DAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 56 ~~g~~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
..+=.+|| +|-|+.+.+++++.+.+ ++.+|..++-..|=..
T Consensus 276 ~~~M~~Mk~DM~GAAaV~g~~~a~a~l~----l~vnv~~~i~~~ENm~ 319 (490)
T 3jru_B 276 QGGIEEMKYDMCGGATVIGTFVATVKAE----LPINLVVVVPAVENAI 319 (490)
T ss_dssp SSCGGGGGGGGHHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEECC
T ss_pred cccHhhCcccchHHHHHHHHHHHHHHcC----CCcEEEEEEEeeccCC
Confidence 22223454 78889999999999885 6799999888888764
No 80
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=65.87 E-value=62 Score=31.30 Aligned_cols=89 Identities=12% Similarity=0.035 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHcCCEEEEcC--------C--------C--C----EEEEecCCCCCCCeEEEeecccCC--------cC
Q 016853 7 RAGNLIRQWMEDAGLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSHLDTV--------VD 56 (381)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~--------~--------g--n----v~a~~~g~~~~~~~i~l~~H~DtV--------p~ 56 (381)
..+++..+.+++.|+++++.. + | + +..+|.|..+ .++|.|.|-==|. |.
T Consensus 188 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~-~~~i~LVGKGiTFDsGG~slKp~ 266 (491)
T 2hc9_A 188 ALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGS-TEHIALVGKGVVYDTGGLQIKTK 266 (491)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTC-SCEEEEEEEEEEEECCTTSCCCT
T ss_pred HHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCC-CCcEEEEcCceEecCCCccCCCC
Confidence 467788888889999987532 1 1 1 5556655442 4677776643222 22
Q ss_pred CCCCcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 57 AGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 57 ~g~~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
.+=..|| +|-|+.+.+++++.+.+ ++.+|..++-..|=..
T Consensus 267 ~~M~~Mk~DM~GAAaVlg~~~a~a~l~----l~vnv~~~l~~~ENm~ 309 (491)
T 2hc9_A 267 TGMPNMKRDMGGAAGMLEAYSALVKHG----FSQTLHACLCIVENNV 309 (491)
T ss_dssp TTSTTGGGGGHHHHHHHHHHHHHHTTT----CCSEEEEEEEEEEECC
T ss_pred cChhhccccccHHHHHHHHHHHHHHcC----CCceEEEEEEeeecCC
Confidence 2223444 78889999999998874 6899999888888764
No 81
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=65.42 E-value=2.8 Score=38.40 Aligned_cols=83 Identities=6% Similarity=0.095 Sum_probs=53.0
Q ss_pred eeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHHHHcCceEEEEEeccCCCccCCHHHHHHHHHHHHHHHhhccCCCCc
Q 016853 268 VIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQH 347 (381)
Q Consensus 268 vIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~ 347 (381)
.++..+.+.+|.+.... ......|..+++ .. ....++.+++.+.+++++. | .
T Consensus 208 ~~~~~~~i~~D~~~~~~---------------~~~~~~G~~i~~--~~---~~~~~~~l~~~~~~~a~~~-g-------i 259 (321)
T 3cpx_A 208 TFHVKQSLICDITWVTE---------------GVEAGKGVAISM--RD---RMIPRKKYVNRIIELARQT-D-------I 259 (321)
T ss_dssp HHCCCEEEECCCEECCS---------------SSCTTSCEEEEE--ES---SSCCCHHHHHHHHHHHTTS-S-------C
T ss_pred ccCCCEEEEEeCccccC---------------CcccCCCcEEEE--CC---CCCCCHHHHHHHHHHHHHc-C-------C
Confidence 56777888888887543 000112444443 33 3346888999988888875 2 2
Q ss_pred ccccc-cCcccHHHHHH--hhh-cCeEEEEEeeCC
Q 016853 348 EIPVI-MSGAGHDAMAM--SHL-TKVCSLLCRLNN 378 (381)
Q Consensus 348 ~~~~~-~~~g~tD~~~~--~~~-~p~~~~~~~~~~ 378 (381)
++... ..+|+||++++ ++. +|++.++.|.+.
T Consensus 260 ~~q~~~~~~GGsD~~~~~~s~~Gipt~~lG~~~~~ 294 (321)
T 3cpx_A 260 PFQLEVEGAGASDGRELQLSPYPWDWCFIGAPEKD 294 (321)
T ss_dssp CEEEEECSSCCCHHHHHHHSSSCCBCCBEECEEBS
T ss_pred CEEEEeCCCCCccHHHHHHhCCCCCEEEEchhhcc
Confidence 23321 25688999999 444 999988888754
No 82
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=56.04 E-value=14 Score=25.32 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=26.3
Q ss_pred CeEEEEEEeeCCChhHHHHHHHHHHHHHHHH
Q 016853 271 GEVTFTVDLRAIDDAGRETVLYELSNQLYQI 301 (381)
Q Consensus 271 ~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~ 301 (381)
+--++.+|||...+...+..+.++++.+.+.
T Consensus 15 dgqeieidirvstgkeleralqelekalara 45 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARA 45 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhc
Confidence 4457899999999999999999998887654
No 83
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=55.13 E-value=53 Score=31.96 Aligned_cols=91 Identities=10% Similarity=0.028 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHcCCEEEEcC--------C--------C--C----EEEEecCCCCCCCeEEEeecc---cC-----CcC
Q 016853 7 RAGNLIRQWMEDAGLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSHL---DT-----VVD 56 (381)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~--------~--------g--n----v~a~~~g~~~~~~~i~l~~H~---Dt-----Vp~ 56 (381)
..++...+.+++.|+++++.+ . | + +..+|.|.++..++|.|.|-= |+ =|.
T Consensus 226 ~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~~iaLVGKGITFDsGG~slKp~ 305 (528)
T 3kr4_A 226 SLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKKKIALVGKGITFDSGGYNLKAA 305 (528)
T ss_dssp HHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCEEEEEEEEEEEEECCTTSCSCS
T ss_pred HHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCCcEEEecCceEeecCCcccCCC
Confidence 346667777788899987532 1 1 1 566676654345778887753 33 132
Q ss_pred CCC--CcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 57 AGI--FDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 57 ~g~--~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
.|. ..|| +|-|+.+.+++++.+.+ .++.+|..++-..|=..
T Consensus 306 ~g~~M~~MK~DM~GAAaVlg~~~aia~l~---~~~vnv~~vi~~~ENm~ 351 (528)
T 3kr4_A 306 PGSMIDLMKFDMSGCAAVLGCAYCVGTLK---PENVEIHFLSAVCENMV 351 (528)
T ss_dssp TTCCGGGGGGGGHHHHHHHHHHHHHHHHC---CSSEEEEEEEEEEEECC
T ss_pred CCcCHHHhhcCcchHHHHHHHHHHHHhcC---CCCceEEEEEEeeccCC
Confidence 231 2455 67888899999988774 23578888887777754
No 84
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=50.86 E-value=90 Score=30.05 Aligned_cols=88 Identities=8% Similarity=0.061 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHcCCEEEEcC-------CC----------C----EEEEecCCCCCCCeEEEeecccCCcCCCC------
Q 016853 7 RAGNLIRQWMEDAGLRTWVDH-------LG----------N----VHGRVEGLNASAQALLIGSHLDTVVDAGI------ 59 (381)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~-------~g----------n----v~a~~~g~~~~~~~i~l~~H~DtVp~~g~------ 59 (381)
..+++..+.+++.|+++++.. .+ + +..+| |. ++.++|.|.|-==|.-.||-
T Consensus 188 ~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y-~~-~~~~~i~LVGKGITFDsGGlslKp~~ 265 (482)
T 3ij3_A 188 ELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKW-GD-IKAPKVTLVGKGVCFDSGGLDIKTPG 265 (482)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEE-SC-TTSCEEEEEECEEEEECCTTSCCCHH
T ss_pred HHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEe-CC-CCCCeEEEEccceEeecCCccCcCcc
Confidence 457778888888999886531 11 1 44445 32 23466666654322222221
Q ss_pred --CcCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 60 --FDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 60 --~D~k---~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
..|| +|-|+.+.+++++.+.+ ++.+|..++-..|=..
T Consensus 266 ~M~~MK~DMgGAAaVlg~~~aia~l~----lpvnv~~ii~~~ENm~ 307 (482)
T 3ij3_A 266 GMLLMKKDMGGAAHALGLARMIMLQQ----LPVRLRLLIPAVENAI 307 (482)
T ss_dssp HHTTGGGGGHHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEECC
T ss_pred chhhccccchHHHHHHHHHHHHHHcC----CCceEEEEEEeeccCC
Confidence 1343 77888999999999884 6899999988888764
No 85
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=47.04 E-value=17 Score=33.27 Aligned_cols=48 Identities=6% Similarity=0.040 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCCccccc-ccCcccHHHHHHhh--h-cCeEEEEEeeC
Q 016853 322 CDADLSSQLKSASYAALKRMTGATQHEIPV-IMSGAGHDAMAMSH--L-TKVCSLLCRLN 377 (381)
Q Consensus 322 ~~~~~~~~l~~a~~~~~g~~~~~~~~~~~~-~~~~g~tD~~~~~~--~-~p~~~~~~~~~ 377 (381)
.++.+.+.+.+++++. |. .+.. +.++++||++.++. . +|+++++.|+.
T Consensus 254 ~~~~l~~~l~~~a~~~-gi-------~~~~~~~~~ggtDa~~~~~~~~GiP~v~~g~~~~ 305 (340)
T 2fvg_A 254 IPKEIFQTIVDTAKNN-DI-------PFQMKRRTAGGTDAGRYARTAYGVPAGVISTPAR 305 (340)
T ss_dssp CCHHHHHHHHHHHHHT-TC-------CCEECCCC-------------CCSCEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHc-CC-------CeEEEecCCCCccHHHHHhhCCCCcEEEeccccc
Confidence 3566777777777654 22 2222 24568899999985 3 99999988865
No 86
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=41.98 E-value=12 Score=36.20 Aligned_cols=38 Identities=21% Similarity=0.108 Sum_probs=30.7
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCC
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~ 101 (381)
...|++.++.++|.|++.++ .++.++.++++..||.|.
T Consensus 258 ~~lDdr~~~~~~l~al~~~~------~~~~~~~~~~~d~EEVGs 295 (461)
T 2glj_A 258 YGQDDRICAYTSFEAMLEMK------NAKKTCITILVDKEEVGS 295 (461)
T ss_dssp TTHHHHHHHHHHHHHHHTCC------SCSSCEEEEEECCGGGTC
T ss_pred ecchhHHHHHHHHHHHHhhc------cCCCeEEEEEEccCCCCC
Confidence 56799999998888866543 367899999999999853
No 87
>2zvy_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell inner membrane, cell membrane, flagellar rotation, membrane; 1.75A {Salmonella typhimurium} PDB: 2zvz_A
Probab=36.79 E-value=77 Score=26.14 Aligned_cols=52 Identities=17% Similarity=0.127 Sum_probs=38.1
Q ss_pred eEEEeecccCCcCCC----CCcChHHHHHHHHHHHHHHhcCCCCCCCCCE-EEEEecccc
Q 016853 44 ALLIGSHLDTVVDAG----IFDGSLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSDEE 98 (381)
Q Consensus 44 ~i~l~~H~DtVp~~g----~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i-~~~~~~~EE 98 (381)
.|.+.||.|.+|... ......+..=+.++.++|.+.|+ .+..| .+...++..
T Consensus 92 ~I~I~GHTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi---~~~ri~~~~G~G~~~ 148 (183)
T 2zvy_A 92 RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGL---DNGKVLRVVGMAATM 148 (183)
T ss_dssp CEEEEEECCSSCTTCSTTSSCHHHHHHHHHHHHHHHHHHTTC---CTTCEEEEEECTTTT
T ss_pred eEEEEEEeCCCCCccccccccHHHHHHHHHHHHHHHHHHcCC---CHHHhheeEEecccC
Confidence 799999999998732 24456777777888889988886 56677 566555544
No 88
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=34.61 E-value=26 Score=33.11 Aligned_cols=27 Identities=26% Similarity=0.341 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCC
Q 016853 2 SPASVRAGNLIRQWMEDAGLRTWVDHL 28 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~ 28 (381)
|+.+.++++|+.+.|+++|++++.+..
T Consensus 34 s~g~~~a~~yi~~~~~~~Gl~~~~q~~ 60 (421)
T 2ek8_A 34 SPEELKAVRYIEQQFKSYGYHVEVQPF 60 (421)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHCCCceEEEEE
Confidence 678999999999999999998865543
No 89
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=32.82 E-value=31 Score=32.97 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHHHHHcCC-EEEEcC
Q 016853 2 SPASVRAGNLIRQWMEDAGL-RTWVDH 27 (381)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~-~~~~~~ 27 (381)
|+.+.++++|+.+.|+++|+ +++.+.
T Consensus 41 S~g~~~a~~~i~~~l~~~G~~~v~~q~ 67 (444)
T 3iib_A 41 SEQDKVAVDWAIAKLQSLGFDRVYKEP 67 (444)
T ss_dssp SHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHcCCCceEeee
Confidence 68899999999999999999 676554
No 90
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=32.27 E-value=8.8 Score=37.07 Aligned_cols=38 Identities=13% Similarity=0.068 Sum_probs=30.0
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCC
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~ 100 (381)
...|++.+++++|.|++.+++ .++.++.++|+..||.|
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~-----~~~~~~~~~~~d~EEVG 289 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE-----TPNKTAICFLVDKEEIG 289 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC-----CCSSCEECCCBCSTTC-
T ss_pred ecCccHHHHHHHHHHHHhhhc-----cCCceEEEEEEcccccC
Confidence 457999999998888665532 25789999999999985
No 91
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=30.84 E-value=17 Score=34.79 Aligned_cols=49 Identities=18% Similarity=0.093 Sum_probs=36.0
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCCCCCCCcchHHHhccCCc
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV 118 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~~~~~~~Gs~~l~~~l~~ 118 (381)
...|++.++.++|.|++.++ . .+.++.++| ..||.| ..|+......+.+
T Consensus 232 ~~lDdr~~~~~~l~al~~~~--~----~~~~v~~~f-d~EEVG-----s~ga~gA~s~~~~ 280 (428)
T 2ijz_A 232 ARLDNLLSCHAGLEALLNAE--G----DENCILVCT-DHEEVG-----SCSHCGADGPFLE 280 (428)
T ss_dssp CCSSCSSTTTTTTTHHHHTT--S----CSSSCEEEE-CBSCTT-----TTCHHHHSSCCTT
T ss_pred ecCccHHHHHHHHHHHHhcc--c----CCceEEEEE-eccccC-----ccchhhhhccccH
Confidence 56799999999999988765 2 457888888 999985 3677765544444
No 92
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=29.88 E-value=20 Score=34.89 Aligned_cols=43 Identities=16% Similarity=-0.001 Sum_probs=29.4
Q ss_pred CCCcChHHHHHHHHHHHHHHhcC--CCCCCCCCEEEEEeccccCCC
Q 016853 58 GIFDGSLGIITAISALKVLKSTG--KLGKLKRPVEVIAFSDEEGVR 101 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~--~~~~~~~~i~~~~~~~EE~~~ 101 (381)
.+.|+..++.++|.|++.+++.. . ...+....++++..||.|.
T Consensus 282 ~~lDnr~~~~~~leaL~~~~~~~~~~-~~~~~~~v~v~~dqEEVGs 326 (496)
T 3vat_A 282 PRLDNLHSCFCALQALIDSCSAPASL-AADPHVRMIALYDNEEVGS 326 (496)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSHHHH-HHCCSEEEEEEESCGGGTS
T ss_pred eccccHHHHHHHHHHHHhhhcccccc-ccCCCcEEEEEEccCCcCC
Confidence 67899999999999988775310 0 0012334489999999853
No 93
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=29.07 E-value=29 Score=33.28 Aligned_cols=37 Identities=27% Similarity=0.177 Sum_probs=30.2
Q ss_pred CCCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCCC
Q 016853 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (381)
Q Consensus 58 g~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE~~~ 101 (381)
.+.|+..++.++|.|++.+ . ++..+.++++..||.|.
T Consensus 246 ~~lDnr~~~~~~l~al~~~---~----~~~~~~~~~~d~EEVGs 282 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA---N----PEKSIGVIFFDKEEIGS 282 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC---C----CSSCEEEEEESCGGGTS
T ss_pred ecchhhHHHHHHHHHHHhc---C----CCceEEEEEEcccccCC
Confidence 5789999999888887654 2 46789999999999853
No 94
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* 3imp_B
Probab=27.64 E-value=1.1e+02 Score=23.66 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=38.2
Q ss_pred CeEEEeecccCCcCC-CCC--cChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccc
Q 016853 43 QALLIGSHLDTVVDA-GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (381)
Q Consensus 43 ~~i~l~~H~DtVp~~-g~~--D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE 98 (381)
..|.+.||.|..+.. +.+ ..+.+..=+.++.++|.+.|+ ++..|.+...++.+
T Consensus 37 ~~i~I~GhtD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 92 (138)
T 3cyp_B 37 VHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV---NPNQLSFSSYGSTN 92 (138)
T ss_dssp CEEEEEEECCCCCC----CCSHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEECTTCS
T ss_pred cEEEEEEecCCCCcccccchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECccC
Confidence 689999999998752 223 556777777888889988886 56778766655544
No 95
>2zov_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell projection, flagellar rotation, inner membrane, membrane; 2.00A {Salmonella typhimurium}
Probab=27.62 E-value=1.1e+02 Score=25.76 Aligned_cols=52 Identities=17% Similarity=0.127 Sum_probs=37.5
Q ss_pred eEEEeecccCCcCCC----CCcChHHHHHHHHHHHHHHhcCCCCCCCCCE-EEEEecccc
Q 016853 44 ALLIGSHLDTVVDAG----IFDGSLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSDEE 98 (381)
Q Consensus 44 ~i~l~~H~DtVp~~g----~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i-~~~~~~~EE 98 (381)
.|.+.||.|.+|... ......+..=+.++.++|.+.|+ .+..| .+...++..
T Consensus 103 ~I~I~GHTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~~G~G~~~ 159 (210)
T 2zov_A 103 RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGL---DNGKVLRVVGMAATM 159 (210)
T ss_dssp CEEEEEEEECSCCCSSCSSCCHHHHHHHHHHHHHHHHHHTTC---CTTCEEEEEEECCC-
T ss_pred eEEEEEEeCCCCCCCcccccchHHHHHHHHHHHHHHHHHcCC---CHHHeeeEEEecccC
Confidence 799999999998732 24456777777888889988886 56677 455555444
No 96
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=25.59 E-value=1.5e+02 Score=28.32 Aligned_cols=46 Identities=15% Similarity=0.099 Sum_probs=38.8
Q ss_pred CCeEEEEEEEEecCCCCceeCCeEEEEEEeeCCChhHHHHHHHHHHHHHHHHH
Q 016853 250 SSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQIC 302 (381)
Q Consensus 250 ~~~ti~~~~i~g~g~~~NvIP~~a~~~~diR~~p~~~~~~~~~~i~~~~~~~~ 302 (381)
..+++|++.++.. . ++..+.+++|++.....+.+.+.++++++...
T Consensus 344 ~~~s~nl~~~~~~-~------~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g 389 (487)
T 2qyv_A 344 VETSLSIGVLKTE-D------NFVRSTMLVRSLIESGKSYVASLLKSLASLAQ 389 (487)
T ss_dssp EEEEEEEEEEEEC-S------SEEEEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred eEeccceEEEEEc-C------CeEEEEEEccCCCHHHHHHHHHHHHHHHHHcC
Confidence 4688999999984 2 57999999999999999999999988876553
No 97
>3khn_A MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str}
Probab=25.11 E-value=1.4e+02 Score=24.14 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=38.6
Q ss_pred CeEEEeecccCCc-CC-CC--CcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccc
Q 016853 43 QALLIGSHLDTVV-DA-GI--FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (381)
Q Consensus 43 ~~i~l~~H~DtVp-~~-g~--~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE 98 (381)
..|.+.||.|.++ .. .. .+...+..=+.++.++|.+.|+ .+..|.+...++.+
T Consensus 83 ~~i~I~GhTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 139 (174)
T 3khn_A 83 QNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGI---EPARLTATGLGELD 139 (174)
T ss_dssp CEEEEEEECCSCCCCTTSSCSSHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEEEETSS
T ss_pred CeEEEEEEeCCCCCcCCCCchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEEcCcC
Confidence 4799999999998 22 22 3556777778888899998886 56778766655544
No 98
>3s0y_A Motility protein B; peptidoglycan binding, flagellar rotation, chemotaxis, bacte flagellar motor, membrane, motor protein; 1.80A {Helicobacter pylori} PDB: 3s0w_A
Probab=21.81 E-value=1.7e+02 Score=24.11 Aligned_cols=52 Identities=13% Similarity=0.074 Sum_probs=38.4
Q ss_pred eEEEeecccCCcCCC---CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccc
Q 016853 44 ALLIGSHLDTVVDAG---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (381)
Q Consensus 44 ~i~l~~H~DtVp~~g---~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE 98 (381)
.|.+.||.|.++..+ .+....+..=+.++.++|.+.|+ .+..|.+...++..
T Consensus 93 ~i~I~GhTD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 147 (193)
T 3s0y_A 93 HINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV---NPNQLSFSSYGSTN 147 (193)
T ss_dssp EEEEEECCCSCCCTTSSCSCHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEECTTSC
T ss_pred EEEEEEEeCCCCCccccchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECCcC
Confidence 899999999987632 23456777778888899998886 56678766555444
No 99
>3s06_A Motility protein B; peptidoglycan binding, flagellar rotation, chemotaxis, bacte flagellar motor, membrane, motor protein; 1.80A {Helicobacter pylori} PDB: 3s03_A 3s0h_A 3s02_A
Probab=20.74 E-value=1.4e+02 Score=23.92 Aligned_cols=52 Identities=13% Similarity=0.074 Sum_probs=39.0
Q ss_pred eEEEeecccCCcCCC---CCcChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccc
Q 016853 44 ALLIGSHLDTVVDAG---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (381)
Q Consensus 44 ~i~l~~H~DtVp~~g---~~D~k~giaa~l~a~~~l~~~~~~~~~~~~i~~~~~~~EE 98 (381)
.|.+.||.|.++..+ .+..+.+..=+.++.++|.+.|+ .+..|.+...++.+
T Consensus 66 ~i~I~GhTD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 120 (166)
T 3s06_A 66 HINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV---NPNQLSFSSYGSTN 120 (166)
T ss_dssp EEEEEEEEESCCCCCTTCCSHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEEEEEEE
T ss_pred eEEEEEeeCCCCcccccchhHHHHHHHHHHHHHHHHHHcCC---ChHhEEEEEECCcC
Confidence 799999999987632 24456777778888899999986 56778776665554
Done!