BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016857
(381 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225444029|ref|XP_002281743.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic [Vitis vinifera]
Length = 383
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/397 (77%), Positives = 336/397 (84%), Gaps = 30/397 (7%)
Query: 1 MLGGLYGDLPPPS--DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILK---PQS 55
MLGGLYGDLPPPS DEDKPTN++ VWSSSAKMAP LRKPSS+FAPPQ++LK Q+
Sbjct: 1 MLGGLYGDLPPPSSADEDKPTNSS--VWSSSAKMAPAALRKPSSVFAPPQSVLKTQHAQA 58
Query: 56 KPKTTQNSLPTRPHSSPAIAPSP----DDAAALP--QPALVGVTSTVIEEYDPARPNDYE 109
KPKT +S + SP +APSP ++ A P QPALVGVTS+V+EEYDPARPNDYE
Sbjct: 59 KPKTLNSS---KILISPGLAPSPSVLPNEGARSPSFQPALVGVTSSVVEEYDPARPNDYE 115
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASA-----SRLNMSGEEAWKR 164
DYRRE+K+KA++AE++RELERRRQE EERER RE SRLN+SGEEAW+R
Sbjct: 116 DYRRERKRKAMEAEMKRELERRRQEEEERERERREREAAEREREYGDSRLNISGEEAWRR 175
Query: 165 RAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGW 224
RAAMS G PRSPSPP G GFTIGKSET GLG+GAGGQMTAAQRMMAKMGW
Sbjct: 176 RAAMS--GAVPRSPSPP-------TSGDGFTIGKSETVGLGVGAGGQMTAAQRMMAKMGW 226
Query: 225 KEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMV 284
KEGQGLG+QEQGITTPLMA+KTDRRAGVIVNASE+K EKKVKSVNFN PPTRVLLLRNMV
Sbjct: 227 KEGQGLGKQEQGITTPLMAKKTDRRAGVIVNASESKPEKKVKSVNFNSPPTRVLLLRNMV 286
Query: 285 GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALID 344
GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE+TTKAL+D
Sbjct: 287 GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVD 346
Query: 345 LDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGFT 381
LDGRFFGGRVV ATFYDE+RFSKNELAP+PGEIPGFT
Sbjct: 347 LDGRFFGGRVVHATFYDEDRFSKNELAPMPGEIPGFT 383
>gi|147807935|emb|CAN77677.1| hypothetical protein VITISV_023439 [Vitis vinifera]
Length = 366
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 294/391 (75%), Positives = 321/391 (82%), Gaps = 35/391 (8%)
Query: 1 MLGGLYGDLPPPS--DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILK---PQS 55
MLGGLYGDLPPPS DEDKPTN++ VWSSSAKMAP LRKPSS+FAPPQ++LK Q+
Sbjct: 1 MLGGLYGDLPPPSSADEDKPTNSS--VWSSSAKMAPAALRKPSSVFAPPQSVLKTQHAQA 58
Query: 56 KPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREK 115
KPKT +S + SP +APSP + LP +YDPARPNDYEDYRRE+
Sbjct: 59 KPKTLNSS---KILISPGLAPSP---SVLPNEG--------ARKYDPARPNDYEDYRRER 104
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERENASA-----SRLNMSGEEAWKRRAAMSS 170
K+KA++AE++RELERRRQE EERER RE SRLN+SGEEAW+RRAAMS
Sbjct: 105 KRKAMEAEMKRELERRRQEEEERERERREREAAEREREYGDSRLNISGEEAWRRRAAMS- 163
Query: 171 GGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGL 230
G PRSPSPP G GFTIGKSET GLG+GAGGQMTAAQRMMAKMGWKEGQGL
Sbjct: 164 -GAVPRSPSPPT-------SGDGFTIGKSETVGLGVGAGGQMTAAQRMMAKMGWKEGQGL 215
Query: 231 GRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD 290
G+QEQGITTPLMA+KTDRRAGVIVNASE+K EKKVKSVNFN PPTRVLLLRNMVGPGEVD
Sbjct: 216 GKQEQGITTPLMAKKTDRRAGVIVNASESKPEKKVKSVNFNSPPTRVLLLRNMVGPGEVD 275
Query: 291 DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFF 350
DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE+TTKAL+DLDGRFF
Sbjct: 276 DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRFF 335
Query: 351 GGRVVRATFYDEERFSKNELAPLPGEIPGFT 381
GGRVV ATFYDE+RFSKNELAP+PGEI GFT
Sbjct: 336 GGRVVHATFYDEDRFSKNELAPMPGEILGFT 366
>gi|357475093|ref|XP_003607832.1| DNA-damage-repair/toleration protein DRT111 [Medicago truncatula]
gi|355508887|gb|AES90029.1| DNA-damage-repair/toleration protein DRT111 [Medicago truncatula]
Length = 390
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 292/403 (72%), Positives = 322/403 (79%), Gaps = 35/403 (8%)
Query: 1 MLGGLYGDLPPPS--DEDKPTNTTTTVWSSSAKMAPPTLRKPSS-IFAPPQTILKPQSKP 57
MLGGLYGDLPPPS +EDKPT T VWSSS KMAP TLRKPSS ++ PP T+L+ Q+KP
Sbjct: 1 MLGGLYGDLPPPSSAEEDKPT---TNVWSSSTKMAPATLRKPSSSLYTPPHTLLRSQNKP 57
Query: 58 KTTQNSLPT--RPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREK 115
K NS T P P +A DD QPALVGV STV+EEYDPARPNDYE+YRREK
Sbjct: 58 KIV-NSTKTILSPAPQPILASPLDDVVV--QPALVGVQSTVMEEYDPARPNDYEEYRREK 114
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERENASA-----------SRLNMSGEEAWKR 164
K+KA +AE+ RELERRR+E EERE+ ERE SRLN+SGEEAW+R
Sbjct: 115 KRKAREAEMMRELERRREEEEEREKERERERERERERDRDRERDQGDSRLNISGEEAWRR 174
Query: 165 RAAMSSGGVP------PRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
R MS GG PRSPSPP G GF+IGKSET GLG+GAGGQMTAAQRM
Sbjct: 175 RVGMSGGGGGSGGRGVPRSPSPP-------GSVDGFSIGKSETVGLGVGAGGQMTAAQRM 227
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVL 278
MAKMGWK+GQGLG+QEQGITTPLMA+KTDRRAGVIVNAS++KS+KKVKSVN NG PTRVL
Sbjct: 228 MAKMGWKQGQGLGKQEQGITTPLMAKKTDRRAGVIVNASDSKSDKKVKSVNINGVPTRVL 287
Query: 279 LLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQT 338
LLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFP DEAVRIFVQFERSE+T
Sbjct: 288 LLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPTDEAVRIFVQFERSEET 347
Query: 339 TKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGFT 381
TKAL+DLDGR+FGGR VRATFYDE++FSKNELAP+PGEIPGFT
Sbjct: 348 TKALVDLDGRYFGGRTVRATFYDEDKFSKNELAPMPGEIPGFT 390
>gi|15220757|ref|NP_174336.1| DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana]
gi|20141383|sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111,
chloroplastic; Flags: Precursor
gi|6634771|gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repair/Toleration
protein (DRT111) precurser, and contains a G-patch
PF|01585 domain and RNA recognition PF|00076 motif. EST
gb|AA395591 comes from this gene [Arabidopsis thaliana]
gi|15028005|gb|AAK76533.1| putative DNA damage repair protein [Arabidopsis thaliana]
gi|20259641|gb|AAM14338.1| putative DNA damage repair protein [Arabidopsis thaliana]
gi|332193110|gb|AEE31231.1| DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana]
Length = 387
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 284/395 (71%), Positives = 330/395 (83%), Gaps = 23/395 (5%)
Query: 1 MLGGLYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTT 60
MLGGLYGDLPPP+D++KP+ +++VWSSS KMAPPTLRKP + FAPPQTIL+P +KPK
Sbjct: 1 MLGGLYGDLPPPTDDEKPSGNSSSVWSSSTKMAPPTLRKPPA-FAPPQTILRPLNKPKPI 59
Query: 61 QNS----LPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKK 116
++ P S + P+ +++A QPALVGVTS+VIEEYDPARPNDYE+Y+REKK
Sbjct: 60 VSAPYKPPPPSNSSQSVLIPA-NESAPSHQPALVGVTSSVIEEYDPARPNDYEEYKREKK 118
Query: 117 KKAVDAEIRRELERRRQEGEERERREREERE------NASASRLNMSGEEAWKRRAAMSS 170
+KA +AE++RE+++RRQE EER++REREERE N+ SRLN+SGEEAWKRRAAMS
Sbjct: 119 RKATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKRRAAMSG 178
Query: 171 GGVPPRSPSP-PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQG 229
GG + S PP NV+ GF+IGKSETSGLG+GAGGQMTAAQRMMAKMGWK+GQG
Sbjct: 179 GGSGGKGRSSSPPGNVD------GFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQG 232
Query: 230 LGRQEQGITTPLMARKTDRRAGVIVNASENKS----EKKVKSVNFNGPPTRVLLLRNMVG 285
LG+ EQGITTPLMA+KTDRRAGVIVNASENKS +K VKSVN NG PTRVLLLRNMVG
Sbjct: 233 LGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNMVG 292
Query: 286 PGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDL 345
PG+VDDELEDEVG EC KYGTVTRVLIFEITEPNFPV EAVRIFVQF R E+TTKAL+DL
Sbjct: 293 PGQVDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDL 352
Query: 346 DGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
DGR+FGGR VRATFYDEE+FSKNELAP+PGEIPG+
Sbjct: 353 DGRYFGGRTVRATFYDEEKFSKNELAPVPGEIPGY 387
>gi|449433648|ref|XP_004134609.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Cucumis sativus]
Length = 372
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 295/384 (76%), Positives = 330/384 (85%), Gaps = 15/384 (3%)
Query: 1 MLGGLYGDLPPPS--DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPK 58
MLGGLYGDLPPPS +EDKPTN+T VWSSS KMAPPTLRKPSS+FAP QT+L+ QSK K
Sbjct: 1 MLGGLYGDLPPPSSAEEDKPTNST--VWSSSTKMAPPTLRKPSSVFAP-QTVLRSQSKIK 57
Query: 59 TTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKK 118
++ P S+ A P A A+ QPALV VTSTV+EEYDPARPNDYE+YR EKK+K
Sbjct: 58 AATSTHPKVSVSTQVEASQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRVEKKRK 117
Query: 119 AVDAEIRRELERRRQEGEERERREREERENA-SASRLNMSGEEAWKRRAAMSSGGVPPRS 177
A++AE+R+ELERRRQE EERE++EREERE S SR+N+SGEEAW+RRAA SG +P
Sbjct: 118 AMEAEMRKELERRRQEEEEREKKEREEREREHSDSRINISGEEAWRRRAA-KSGAIPRSP 176
Query: 178 PSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGI 237
P V+ GF+IGKSET GLG+GAGGQMTAAQRMMAKMGWKEGQGLG+QEQGI
Sbjct: 177 SPPSSVD--------GFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGI 228
Query: 238 TTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEV 297
TTPLMA+KTD RAGVIVNA++ KSEKKVKSVNFNG PTRVLLLRNMVGPGEVDDELE+EV
Sbjct: 229 TTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEV 288
Query: 298 GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE+TTKAL+DLDGR+FGGRVVRA
Sbjct: 289 GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRA 348
Query: 358 TFYDEERFSKNELAPLPGEIPGFT 381
TFYDEERFSKNELAP+PGE+PGFT
Sbjct: 349 TFYDEERFSKNELAPMPGEVPGFT 372
>gi|297845986|ref|XP_002890874.1| hypothetical protein ARALYDRAFT_473276 [Arabidopsis lyrata subsp.
lyrata]
gi|297336716|gb|EFH67133.1| hypothetical protein ARALYDRAFT_473276 [Arabidopsis lyrata subsp.
lyrata]
Length = 385
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/396 (71%), Positives = 330/396 (83%), Gaps = 27/396 (6%)
Query: 1 MLGGLYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTT 60
MLGGLYGDLPPPSD++KP+ +++VWSSS KMAPPTLRKP + FAPPQTIL+PQ+KPK
Sbjct: 1 MLGGLYGDLPPPSDDEKPSGNSSSVWSSSTKMAPPTLRKPPA-FAPPQTILRPQNKPKPI 59
Query: 61 QNS------LPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRRE 114
+S + S + P+ +++A QPALV ++VIEEYDPARPNDYE+Y+RE
Sbjct: 60 VSSQYKPPPPSSTNSSQSVLTPA-NESAPSHQPALV---ASVIEEYDPARPNDYEEYKRE 115
Query: 115 KKKKAVDAEIRRELERRRQEGEERERREREERE------NASASRLNMSGEEAWKRRAAM 168
+K+KA++AE++REL++RRQE EERE+REREER+ N+ SRLN+SGEEAWKRRAAM
Sbjct: 116 QKRKAMEAEMKRELDKRRQEEEEREKREREERDKERERDNSDPSRLNISGEEAWKRRAAM 175
Query: 169 SSGGVPPRSPSP-PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEG 227
S GG + S PP NV+ GF+IGKSETSGLG+GAGGQMTAAQRMMAKMGWK+G
Sbjct: 176 SGGGSGGKRRSSSPPGNVD------GFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQG 229
Query: 228 QGLGRQEQGITTPLMARKTDRRAGVIVNASENKS---EKKVKSVNFNGPPTRVLLLRNMV 284
QGLG+ EQGITTPLMA+KTDRRAGVIVNASENKS EKKVKSVN NG PTRVLLLRNMV
Sbjct: 230 QGLGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVKSVNINGEPTRVLLLRNMV 289
Query: 285 GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALID 344
GPGEVDDELEDEVG EC KYGTVTRVLIFEITEPNFPV EAVRIFVQF R E+TTKAL+D
Sbjct: 290 GPGEVDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVD 349
Query: 345 LDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
LDGR+FGGR VRATFYDEE+FSKNELAP+PGEIPG+
Sbjct: 350 LDGRYFGGRTVRATFYDEEKFSKNELAPVPGEIPGY 385
>gi|356576849|ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Glycine max]
Length = 392
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 287/401 (71%), Positives = 324/401 (80%), Gaps = 29/401 (7%)
Query: 1 MLGGLYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTT 60
MLGGLYGDLPPPS ++ T VWSSS KMAP TLRKP+S+FAPPQT+L+ Q KP+ T
Sbjct: 1 MLGGLYGDLPPPSSAEEDNKPTPNVWSSSTKMAPATLRKPASLFAPPQTLLRAQPKPRPT 60
Query: 61 QNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKKAV 120
++P +P S + AP PDDA L QPALVGV STV+EEYDP RPNDYEDYRR++K+KA
Sbjct: 61 TTTIP-KPILSSSPAPPPDDA--LLQPALVGVQSTVLEEYDPTRPNDYEDYRRDRKRKAR 117
Query: 121 DAEIRRELERRRQEGEERERR-----------EREERENASASRLNMSGEEAWKRRAAMS 169
+AE+ RELERRR E EE E+ + ++S+SRLN+SGEEAW+RRAAMS
Sbjct: 118 EAEMLRELERRRHEEEEEEKEREKERERERERDHSNNNDSSSSRLNVSGEEAWRRRAAMS 177
Query: 170 SGG------VPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMG 223
G + PRSPSPPP NV+ GFTIGKSET GLG+GAGGQMTAAQRMMAKMG
Sbjct: 178 GAGSGSGAVLVPRSPSPPPGNVD------GFTIGKSETGGLGVGAGGQMTAAQRMMAKMG 231
Query: 224 WKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVN---FNGPPTRVLLL 280
WKEGQGLG+QEQGITTPLMA+KTDRRAGVIVNAS+N + K V FNG PTRVLLL
Sbjct: 232 WKEGQGLGKQEQGITTPLMAKKTDRRAGVIVNASDNNNSSSSKKVKSVNFNGVPTRVLLL 291
Query: 281 RNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTK 340
RNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPV EAVRIFVQFERSE+TTK
Sbjct: 292 RNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVHEAVRIFVQFERSEETTK 351
Query: 341 ALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGFT 381
AL+DLDGR+FGGRVVRA+FYDEE+FSKNELAP+PGEIPGFT
Sbjct: 352 ALVDLDGRYFGGRVVRASFYDEEKFSKNELAPMPGEIPGFT 392
>gi|224114585|ref|XP_002316803.1| predicted protein [Populus trichocarpa]
gi|222859868|gb|EEE97415.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 277/381 (72%), Positives = 300/381 (78%), Gaps = 22/381 (5%)
Query: 3 GGLYGDLPPPS---DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKT 59
GGLYGDLPPPS +EDKPT TT+TVWS+S MAPPTLRKP P QTILK Q+KPK
Sbjct: 1 GGLYGDLPPPSAAAEEDKPTTTTSTVWSTSTLMAPPTLRKPMPPPPP-QTILKSQNKPKP 59
Query: 60 TQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKKA 119
++ L +P + PD+ AA QPALVGV S VIEEYDPARPNDY+DYRREKK+KA
Sbjct: 60 SKTLL----SPAPPVTVLPDEVAA--QPALVGVNSVVIEEYDPARPNDYDDYRREKKRKA 113
Query: 120 VDAEIRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPS 179
+ E R + + E N+SGEEAWKRRAAMS GGVP RSPS
Sbjct: 114 ----MEAERLREIERRRQEEEERESREREDRERDTNISGEEAWKRRAAMSGGGVP-RSPS 168
Query: 180 PPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITT 239
PP G GF IGKSET GLG+GAGGQMTAAQRMMAKMGWKEGQGLG+QEQGITT
Sbjct: 169 PP-------SNGDGFRIGKSETVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITT 221
Query: 240 PLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGS 299
PLMA+KTDRRAGVIVNASE+K EKKVKSVN NG PTRVLLLRNMVGPGEVDDELEDEV S
Sbjct: 222 PLMAKKTDRRAGVIVNASESKPEKKVKSVNLNGTPTRVLLLRNMVGPGEVDDELEDEVAS 281
Query: 300 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
ECAKYGTVTRVLIFEITE NFP +EAVRIF+QFERSE+TTKALIDLDGRFFGG VVRATF
Sbjct: 282 ECAKYGTVTRVLIFEITELNFPREEAVRIFIQFERSEETTKALIDLDGRFFGGNVVRATF 341
Query: 360 YDEERFSKNELAPLPGEIPGF 380
YDEERFSKNELAP+PGEIPGF
Sbjct: 342 YDEERFSKNELAPIPGEIPGF 362
>gi|166694|gb|AAA73382.1| unnamed protein product [Arabidopsis thaliana]
Length = 383
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/391 (67%), Positives = 312/391 (79%), Gaps = 19/391 (4%)
Query: 1 MLGGLYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTT 60
MLGGLYGDLPPP+D++KP+ +++VWS S KMAPPTLRKP + FAPPQTIL+P +KPK
Sbjct: 1 MLGGLYGDLPPPTDDEKPSGNSSSVWSRSTKMAPPTLRKPPA-FAPPQTILRPLNKPKPI 59
Query: 61 QNSLPTRP--HSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKK 118
S P +P +SS ++ +++A QPALVGVTS+VIEEYDPARPNDYE+Y+REKK+K
Sbjct: 60 V-SAPYKPPPNSSQSVLIPANESAPSHQPALVGVTSSVIEEYDPARPNDYEEYKREKKRK 118
Query: 119 AVDAEIRRELERRRQEGEERERREREERENASAS-----RLNMSGEEAWKRRAAMSSGGV 173
A +AE++RE+++RRQ ER+ REREERE +++SGEE + A + +
Sbjct: 119 ATEAEMKREMDKRRQVYPERDMREREERERREREITVILSVDISGEERGRDPARVVVEVL 178
Query: 174 PPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQ 233
P P NV+ GF+IGKS+ SGLG+GAGGQMT AQRMM KMGWK+GQGLG+
Sbjct: 179 GREDPRLLPGNVD------GFSIGKSKPSGLGVGAGGQMTPAQRMMPKMGWKQGQGLGKS 232
Query: 234 EQGITTPLMARKTDRRAGVIVNASENKS----EKKVKSVNFNGPPTRVLLLRNMVGPGEV 289
EQGI TPLMA+KTDRRAGVIVNASENKS +K VKSVN NG PTRVLLLRNMVGPG+V
Sbjct: 233 EQGIPTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNMVGPGQV 292
Query: 290 DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRF 349
DDELEDEVG ECAKYGTVTRVLIFEITEPNFPV EAVRIFVQF R E+TTKAL+DLDGR+
Sbjct: 293 DDELEDEVGGECAKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLDGRY 352
Query: 350 FGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
FGGR VRATFYDEE+FSKNELAP+PGEIPG+
Sbjct: 353 FGGRTVRATFYDEEKFSKNELAPVPGEIPGY 383
>gi|255564401|ref|XP_002523197.1| DNA-damage repair protein drt111, putative [Ricinus communis]
gi|223537604|gb|EEF39228.1| DNA-damage repair protein drt111, putative [Ricinus communis]
Length = 387
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 293/392 (74%), Positives = 321/392 (81%), Gaps = 17/392 (4%)
Query: 1 MLGGLYGDLPPPS--DEDKPT-NTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKP 57
MLGGLYGDLPPPS +EDK T NT+ TVWS+S MAPPTLRKP+++ PQTILK QSK
Sbjct: 1 MLGGLYGDLPPPSSAEEDKSTTNTSATVWSTSTLMAPPTLRKPATL-TTPQTILKSQSKT 59
Query: 58 KTTQNSLPTRPHS-----SPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYR 112
K Q+ + T + SP + P P++A+ QPALVGV S VIEEYDP+RPNDYEDY+
Sbjct: 60 KPQQSLMTTSSKTLVTSHSPTVLP-PEEAS---QPALVGVNSVVIEEYDPSRPNDYEDYK 115
Query: 113 REKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGG 172
REKK+KA++AE RELERRR E EERE REREERE N+SGEEAW+RRAAMSS
Sbjct: 116 REKKRKALEAERMRELERRRLEEEERELREREERERDRERDRNISGEEAWRRRAAMSSSS 175
Query: 173 VP----PRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQ 228
P S GGGG GF+IGKSE+ GLG+GAGGQMTAAQRMMAKMGWKEGQ
Sbjct: 176 GGGARSPESGGGGGGGGGGGGGGDGFSIGKSESGGLGVGAGGQMTAAQRMMAKMGWKEGQ 235
Query: 229 GLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGE 288
GLGRQEQGITTPLMA+KTDRRAGVIVNASE K EKKVKSVNFNG PTRVLLLRNMVGPGE
Sbjct: 236 GLGRQEQGITTPLMAKKTDRRAGVIVNASETKVEKKVKSVNFNGTPTRVLLLRNMVGPGE 295
Query: 289 VDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGR 348
VDDELEDEVGSECAKYGTVTRVLIFEITEPNFP DEAVRIFVQFERSE+TTKAL+DLDGR
Sbjct: 296 VDDELEDEVGSECAKYGTVTRVLIFEITEPNFPRDEAVRIFVQFERSEETTKALVDLDGR 355
Query: 349 FFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
FFGG VV ATFYDEE+FSKNELAP+PGEIPGF
Sbjct: 356 FFGGNVVHATFYDEEKFSKNELAPMPGEIPGF 387
>gi|194697730|gb|ACF82949.1| unknown [Zea mays]
gi|414885813|tpg|DAA61827.1| TPA: splicing factor 45 [Zea mays]
Length = 382
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/396 (65%), Positives = 304/396 (76%), Gaps = 32/396 (8%)
Query: 1 MLGGLYGDLPPPS---DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQS-- 55
MLGGLYGDLPPPS DEDK +T +VWSS+ KMAPPTLRKPS+ FAPP +IL+ Q
Sbjct: 1 MLGGLYGDLPPPSSAGDEDK--ASTASVWSSATKMAPPTLRKPSTTFAPPPSILRNQHLR 58
Query: 56 KPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREK 115
PK T P P +A P A + QPA V V STV+EEYDPARPNDYEDYR++K
Sbjct: 59 PPKATYIPAP------PVVAAEPAPATSF-QPAFVAVQSTVLEEYDPARPNDYEDYRKDK 111
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERE----------NASASRLNMSGEEAWKRR 165
++A +AE+ +ELERRR+E ++RER + + AS LN+SGEEAWKRR
Sbjct: 112 LRRAKEAELNKELERRRREEQDREREREQREREAREREEKDYQSRASSLNISGEEAWKRR 171
Query: 166 AAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWK 225
AAMS G R+PS PP G GF IG S ++GLG+GAGGQMTAAQRMMAKMGWK
Sbjct: 172 AAMSGSGSAARTPSSPP-------HGDGFAIGSSSSAGLGVGAGGQMTAAQRMMAKMGWK 224
Query: 226 EGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKS-EKKVKSVNFNGPPTRVLLLRNMV 284
EGQGLG+QEQGIT PL+A+KTDRR GVIV+ S ++ EKK +SVNF+G PTRVLLLRNMV
Sbjct: 225 EGQGLGKQEQGITAPLVAKKTDRRGGVIVDESSSRPPEKKPRSVNFDGQPTRVLLLRNMV 284
Query: 285 GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALID 344
GPGEVDDELEDEV SECAKYGTV+RVLIFEIT+ +FP DEAVRIF+QFER+E+ TKA+ID
Sbjct: 285 GPGEVDDELEDEVASECAKYGTVSRVLIFEITQADFPADEAVRIFIQFERAEEATKAMID 344
Query: 345 LDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
L GRFFGGRVV+ATF+DEERF +NELAP+PGE+PGF
Sbjct: 345 LQGRFFGGRVVQATFFDEERFGRNELAPMPGEVPGF 380
>gi|224061272|ref|XP_002300401.1| predicted protein [Populus trichocarpa]
gi|222847659|gb|EEE85206.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 278/385 (72%), Positives = 306/385 (79%), Gaps = 29/385 (7%)
Query: 3 GGLYGDLPPPSD---EDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKT 59
GGLYGDLPPPS E+K T T+TVWSS+ MAPPTLRKP P TILK +KPK
Sbjct: 4 GGLYGDLPPPSATAVEEKSTTNTSTVWSSTTLMAPPTLRKP---ITSPLTILKNPNKPKP 60
Query: 60 TQNSLPTRPHSSPAIAPS---PDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKK 116
++ ++ SP +A + PD+ PQP LVGV S V+EEYDPARPNDYEDYRREKK
Sbjct: 61 QISA--SKSLVSPLVAAATVLPDEVT--PQPELVGVNSVVVEEYDPARPNDYEDYRREKK 116
Query: 117 KKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPR 176
+KA++AE RE+ERRRQE E E ERE +N+SGEEAW+RRAAMS GGVP R
Sbjct: 117 RKAMEAERLREIERRRQE--EEEEEREREREKDRERDVNISGEEAWRRRAAMS-GGVP-R 172
Query: 177 SPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQG 236
S SPP G GF+IG S T GLG+GAGGQMTAAQRMMAKMGWKEGQGLG+QEQG
Sbjct: 173 SSSPP-------RNGDGFSIGTSGTVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQG 225
Query: 237 ITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNG-PPTRVLLLRNMVGPGEVDDELED 295
ITTPLMA+KTDRRAGVIVNASE KKVKSVNFNG PPTRVLLLRNMVGPGEVDDELED
Sbjct: 226 ITTPLMAKKTDRRAGVIVNASE----KKVKSVNFNGTPPTRVLLLRNMVGPGEVDDELED 281
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
EVGSECAKYGTVTRVLIFEITEPNFP +EAVRIFVQFERSE+TTKALIDLDGRFFGG VV
Sbjct: 282 EVGSECAKYGTVTRVLIFEITEPNFPREEAVRIFVQFERSEETTKALIDLDGRFFGGNVV 341
Query: 356 RATFYDEERFSKNELAPLPGEIPGF 380
RA F+DEE+FS NELAP+PGEIPGF
Sbjct: 342 RARFFDEEKFSNNELAPVPGEIPGF 366
>gi|226497132|ref|NP_001149789.1| LOC100283416 [Zea mays]
gi|195634671|gb|ACG36804.1| splicing factor 45 [Zea mays]
Length = 382
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/396 (64%), Positives = 303/396 (76%), Gaps = 32/396 (8%)
Query: 1 MLGGLYGDLPPPS---DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQS-- 55
MLGGLYGDLPPPS DEDK +T +VWSS+ KMAPPTLRKPS+ FAPP +IL+ Q
Sbjct: 1 MLGGLYGDLPPPSSAGDEDK--ASTASVWSSATKMAPPTLRKPSTTFAPPPSILRNQHLR 58
Query: 56 KPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREK 115
PK T P P +A P A + QPA V V STV+EEYDP RPNDYEDYR++K
Sbjct: 59 PPKATYIPAP------PVVAAEPAPATSF-QPAFVAVQSTVLEEYDPPRPNDYEDYRKDK 111
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERE----------NASASRLNMSGEEAWKRR 165
++A +AE+ +ELERRR+E ++RER + + AS LN+SGEEAWKRR
Sbjct: 112 LRRAKEAELNKELERRRREEQDREREREQREREAREREEKDYQSRASSLNISGEEAWKRR 171
Query: 166 AAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWK 225
AAMS G R+PS PP G GF IG S ++GLG+GAGGQMTAAQRMMAKMGWK
Sbjct: 172 AAMSGSGSAARTPSSPP-------HGDGFAIGSSSSAGLGVGAGGQMTAAQRMMAKMGWK 224
Query: 226 EGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKS-EKKVKSVNFNGPPTRVLLLRNMV 284
EGQGLG+QEQGIT PL+A+KTDRR GVIV+ S ++ EKK +SVNF+G PTRVLLLRNMV
Sbjct: 225 EGQGLGKQEQGITAPLVAKKTDRRGGVIVDESSSRPPEKKPRSVNFDGQPTRVLLLRNMV 284
Query: 285 GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALID 344
GPGEVDDELEDEV SECAKYGTV+RVLIFEIT+ +FP DEAVRIF+QFER+E+ TKA+ID
Sbjct: 285 GPGEVDDELEDEVASECAKYGTVSRVLIFEITQADFPADEAVRIFIQFERAEEATKAMID 344
Query: 345 LDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
L GRFFGGRVV+ATF+DEERF +NELAP+PGE+PGF
Sbjct: 345 LQGRFFGGRVVQATFFDEERFGRNELAPMPGEVPGF 380
>gi|356521610|ref|XP_003529447.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Glycine max]
Length = 384
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 272/393 (69%), Positives = 309/393 (78%), Gaps = 21/393 (5%)
Query: 1 MLGGLYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTT 60
MLGGLYGDLPPPS ++ T VWSSS KMAP TLRKP+S+FAPPQT+L+ KPK T
Sbjct: 1 MLGGLYGDLPPPSSAEEDNKPTPNVWSSSTKMAPATLRKPASLFAPPQTLLRAHPKPKPT 60
Query: 61 QNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKKAV 120
P ++PA+ P +D+ QPALVGV STV+EEYDPARPNDYE+YRR+ K+KA
Sbjct: 61 AK--PVLSSTTPALPP--EDSPL--QPALVGVQSTVLEEYDPARPNDYEEYRRDLKRKAR 114
Query: 121 DAEI-----------RRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMS 169
+AE+ E + R +E E+ R+ ++S+SRLN+SGEEAW+RRAAMS
Sbjct: 115 EAEMLRELERRRQEEEEEEKEREKEREKERERDYNNNNDSSSSRLNVSGEEAWRRRAAMS 174
Query: 170 SGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQG 229
S + G GF+IGKSET GLG+GAGGQMTAAQRMMAKMGWKEGQG
Sbjct: 175 GAAAGAPPRS---PSPPLPGNSDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQG 231
Query: 230 LGRQEQGITTPLMARKTDRRAGVIVNASENKSE-KKVKSVNFNGPPTRVLLLRNMVGPGE 288
LG+QEQGITTPLMA+KTDRRAGVIVNAS+N S KKVKSVNFNG PTRVLLLRNMVGPGE
Sbjct: 232 LGKQEQGITTPLMAKKTDRRAGVIVNASDNNSSSKKVKSVNFNGVPTRVLLLRNMVGPGE 291
Query: 289 VDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGR 348
VDDELEDEVGSECAKYG VTRVLIFEITEPNFPV EAVRIFVQFERSE+TTKAL+DLDGR
Sbjct: 292 VDDELEDEVGSECAKYGIVTRVLIFEITEPNFPVHEAVRIFVQFERSEETTKALVDLDGR 351
Query: 349 FFGGRVVRATFYDEERFSKNELAPLPGEIPGFT 381
+FGGRVVRATFYDEE+FSKNELAP+PGEIPGFT
Sbjct: 352 YFGGRVVRATFYDEEKFSKNELAPMPGEIPGFT 384
>gi|242092048|ref|XP_002436514.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
gi|241914737|gb|EER87881.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
Length = 384
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 258/396 (65%), Positives = 307/396 (77%), Gaps = 30/396 (7%)
Query: 1 MLGGLYGDLPPPS---DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQS-- 55
MLGGLYGDLPPPS DEDK +T +VWSS+ KMAPPTLRKPS+ FAPP +IL+ Q
Sbjct: 1 MLGGLYGDLPPPSSTGDEDK--ASTASVWSSATKMAPPTLRKPSTTFAPPPSILRNQHLR 58
Query: 56 KPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREK 115
PK T S P + P +A P A + QPA V V STV+EEYDPARPNDYEDYR++K
Sbjct: 59 PPKATSTSAP----APPVVAAEPAPATSF-QPAFVAVQSTVLEEYDPARPNDYEDYRKDK 113
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERE----------NASASRLNMSGEEAWKRR 165
++A +AE+ +ELERRR+E +ERER + + AS LN+SGEEAWKRR
Sbjct: 114 LRRAKEAELNKELERRRREEQEREREREQREREAREREEKDYQSRASSLNISGEEAWKRR 173
Query: 166 AAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWK 225
AAMS GG R+PS PP G GF IG S ++GLG+GAGGQMTAAQRMMAKMGWK
Sbjct: 174 AAMSGGGAAARTPSSPP-------HGDGFAIGSSSSAGLGVGAGGQMTAAQRMMAKMGWK 226
Query: 226 EGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKS-EKKVKSVNFNGPPTRVLLLRNMV 284
EGQGLG+QEQGIT PL+A+KTDRR GVIV+ S ++ EKK +SV+F+G PTRVLLLRNMV
Sbjct: 227 EGQGLGKQEQGITAPLVAKKTDRRGGVIVDESSSRPPEKKPRSVSFDGQPTRVLLLRNMV 286
Query: 285 GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALID 344
GPGEVDDELEDEV SECAKYGTV+RVLIFEIT+ +FP DEAVRIF+QFER+E+ TKA++D
Sbjct: 287 GPGEVDDELEDEVASECAKYGTVSRVLIFEITQADFPADEAVRIFIQFERAEEATKAMVD 346
Query: 345 LDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
L GRFFGGRVV+ATF+DEE+F +NELAP+PGE+PGF
Sbjct: 347 LQGRFFGGRVVQATFFDEEKFGRNELAPMPGEVPGF 382
>gi|413953116|gb|AFW85765.1| splicing factor 45 [Zea mays]
Length = 384
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/396 (64%), Positives = 304/396 (76%), Gaps = 30/396 (7%)
Query: 1 MLGGLYGDLPPPS---DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSK- 56
MLGGLYGDLPPPS D+DK + T +VWSS+ KMAPPTLRKPS+ FA P +IL+ Q
Sbjct: 1 MLGGLYGDLPPPSSAGDDDKAS--TASVWSSATKMAPPTLRKPSTAFATPPSILRNQHLR 58
Query: 57 -PKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREK 115
PK PT + A+A P A + QPA V V TV+EEYDPARPNDYEDYR++K
Sbjct: 59 PPKAA----PTSVPAPSAVAAEPAAATSF-QPAFVAVQPTVLEEYDPARPNDYEDYRKDK 113
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERE----------NASASRLNMSGEEAWKRR 165
++A +A++ +ELERRR+E +E ER + + AS LN+SGEEAWKRR
Sbjct: 114 LRRANEAKLNKELERRRREDQEPEREREQREREAREREEKDYQSRASSLNISGEEAWKRR 173
Query: 166 AAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWK 225
AAMS GG R+PS PP G GF IG S ++GLG+GAGGQMTAAQRMMAKMGWK
Sbjct: 174 AAMSGGGAAARTPSSPP-------HGDGFAIGSSSSAGLGVGAGGQMTAAQRMMAKMGWK 226
Query: 226 EGQGLGRQEQGITTPLMARKTDRRAGVIVNASENK-SEKKVKSVNFNGPPTRVLLLRNMV 284
EGQGLG+QEQGIT PL+A+KTDRR GVIV+ S ++ SEKK +SVNF+G PTRVLLLRNMV
Sbjct: 227 EGQGLGKQEQGITAPLVAKKTDRRGGVIVDESSSRPSEKKSRSVNFDGQPTRVLLLRNMV 286
Query: 285 GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALID 344
GPGEVDDELEDEV SECA+YGTV+RVLIFEIT+ FP DEAVRIF+QFER+E+ TKA++D
Sbjct: 287 GPGEVDDELEDEVASECARYGTVSRVLIFEITQAYFPSDEAVRIFIQFERAEEATKAMVD 346
Query: 345 LDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
L GRFFGGRVV+ATF+DEERF++NELAP+PGE+PGF
Sbjct: 347 LQGRFFGGRVVQATFFDEERFARNELAPMPGEVPGF 382
>gi|226500638|ref|NP_001149001.1| splicing factor 45 [Zea mays]
gi|195623866|gb|ACG33763.1| splicing factor 45 [Zea mays]
Length = 384
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/396 (64%), Positives = 306/396 (77%), Gaps = 30/396 (7%)
Query: 1 MLGGLYGDLPPPS---DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSK- 56
MLGGLYGDLPPPS D+DK + T +VWSS+ KMAPPTLRKPS+ FA P +IL+ Q
Sbjct: 1 MLGGLYGDLPPPSSAGDDDKAS--TASVWSSATKMAPPTLRKPSTAFATPPSILRNQHLR 58
Query: 57 -PKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREK 115
PK PT + A+A P A + QPA V V TV+EEYDPARPNDYEDYR++K
Sbjct: 59 PPKAA----PTSVPAPSAVAAEPAAATSF-QPAFVAVQPTVLEEYDPARPNDYEDYRKDK 113
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERE----------NASASRLNMSGEEAWKRR 165
++A +A++ +ELERRR+E +ERER + + AS LN+SGEEAWKRR
Sbjct: 114 LRRANEAKLNKELERRRREDQEREREREQREREAREREEKDYQSRASSLNISGEEAWKRR 173
Query: 166 AAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWK 225
AAMS GG R+PS PP G GF IG S ++GLG+GAGGQMTAAQRMMAKMGWK
Sbjct: 174 AAMSGGGAAARTPSSPP-------HGDGFAIGSSSSAGLGVGAGGQMTAAQRMMAKMGWK 226
Query: 226 EGQGLGRQEQGITTPLMARKTDRRAGVIVNASENK-SEKKVKSVNFNGPPTRVLLLRNMV 284
EGQGLG+QEQGIT PL+A+KTDRR GVIV+ S ++ SEKK +SVNF+G PTRVLLLRNMV
Sbjct: 227 EGQGLGKQEQGITAPLVAKKTDRRGGVIVDESSSRPSEKKSRSVNFDGQPTRVLLLRNMV 286
Query: 285 GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALID 344
GPGEVDDELEDEV SECA+YGTV+RVLIFEIT+ +FP DEAVRIF+QFER+E+ TKA++D
Sbjct: 287 GPGEVDDELEDEVASECARYGTVSRVLIFEITQADFPSDEAVRIFIQFERAEEATKAMVD 346
Query: 345 LDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
L GRFFGGRVV+ATF+DEERF++NELAP+PGE+PGF
Sbjct: 347 LQGRFFGGRVVQATFFDEERFARNELAPMPGEVPGF 382
>gi|357113978|ref|XP_003558778.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Brachypodium distachyon]
Length = 380
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/394 (62%), Positives = 297/394 (75%), Gaps = 29/394 (7%)
Query: 1 MLGGLYGDLPPPS----DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSK 56
MLGGLYGDLPPP+ D+DKP+ +VWSS+ KMAPPTLRKPS+ FAPP ++L+
Sbjct: 1 MLGGLYGDLPPPTSASADDDKPS---ASVWSSATKMAPPTLRKPSATFAPPTSLLR---- 53
Query: 57 PKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKK 116
Q+ P + P P + PALV V S V+EEYDPARPNDYE+YR++K
Sbjct: 54 ---NQHPRPAKTPIQQQPHPPPPATTSSFNPALVAVQSNVLEEYDPARPNDYEEYRKDKL 110
Query: 117 KKAVDAEIRRELERRRQEGEERERREREERENA-------SASRLNMSGEEAWKRRAAMS 169
K+A DAE+++EL+RRR+E +E+E+ ERE+ S + LN+SGEEAWKRRAAMS
Sbjct: 111 KRAKDAEMKKELDRRRREEQEKEKERERERESEARQREEQSRASLNISGEEAWKRRAAMS 170
Query: 170 SG---GVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKE 226
G G +PS PP G GFTI S +SGLGLGAGGQMTAAQRMMAKMGWK
Sbjct: 171 GGPAQGAQRAAPSSPP-----HADGAGFTIPGSSSSGLGLGAGGQMTAAQRMMAKMGWKA 225
Query: 227 GQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGP 286
GQGLG+QEQGIT PL+ARKTDRRAGVIV+ S +++EKK KSV F+ PTRVLLLRNM+GP
Sbjct: 226 GQGLGKQEQGITAPLVARKTDRRAGVIVDESSSRTEKKPKSVTFDTEPTRVLLLRNMIGP 285
Query: 287 GEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLD 346
GEVDDELEDEV EC+K+GTV RVLIFEIT+ NFP DEAVRIF+QFER E++ KA+IDL+
Sbjct: 286 GEVDDELEDEVAMECSKFGTVVRVLIFEITQANFPADEAVRIFIQFERVEESIKAMIDLE 345
Query: 347 GRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
GRFFGGRVV ATF++EERF +NELAP+PGE+ GF
Sbjct: 346 GRFFGGRVVHATFFNEERFGRNELAPMPGEVAGF 379
>gi|326503228|dbj|BAJ99239.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/402 (62%), Positives = 304/402 (75%), Gaps = 42/402 (10%)
Query: 1 MLGGLYGDLPPPS----DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILK---- 52
MLGGLYGDLPPP+ D+DKPT +VWSS+ KMAPPTLRKPS+ FAPP ++L+
Sbjct: 1 MLGGLYGDLPPPTSAAGDDDKPT---ASVWSSATKMAPPTLRKPSATFAPPTSLLRNQHP 57
Query: 53 -PQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALP--QPALVGVTSTVIEEYDPARPNDYE 109
P + PK + +P +S A + +P PALV V STV+EEYDPARPNDYE
Sbjct: 58 RPAAAPKPSAVQQQQQPLASAATTTT------VPSFHPALVAVQSTVLEEYDPARPNDYE 111
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERRE---------REERENASASRLNMSGEE 160
DYR++K K+A DAE+++EL+RRR+E +ERER REE+ AS+ LN+SGEE
Sbjct: 112 DYRKDKLKRAKDAEMKKELDRRRREDQEREREREQREAEARLREEQSRASS--LNISGEE 169
Query: 161 AWKRRAAMSS--GGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
AWKRRAAMS GG P R+ SPP G GGF+I S +SGLGLG GGQMTAAQRM
Sbjct: 170 AWKRRAAMSGAGGGTPQRASSPP------HGDAGGFSIPGSSSSGLGLGTGGQMTAAQRM 223
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVL 278
MAKMGWKEGQGLG+QEQGIT PL+ARKTDRRAGVIV+ S S ++ +SVNF G PTRV+
Sbjct: 224 MAKMGWKEGQGLGKQEQGITAPLVARKTDRRAGVIVDES---SSRRPRSVNFEGQPTRVV 280
Query: 279 LLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQT 338
LLRNM+GPGEVDDELEDE+ SEC+K+G V RVLIFEIT+ NFP DEAVRIFV FER+E +
Sbjct: 281 LLRNMIGPGEVDDELEDEIASECSKFGAVLRVLIFEITQANFPADEAVRIFVLFERTEDS 340
Query: 339 TKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
TKAL++L+GR+FGGR+V ATF+DE RF +NELAP+PGE+ GF
Sbjct: 341 TKALVELEGRYFGGRIVHATFFDEGRFERNELAPMPGEVAGF 382
>gi|326488349|dbj|BAJ93843.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512194|dbj|BAJ96078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 305/402 (75%), Gaps = 42/402 (10%)
Query: 1 MLGGLYGDLPPPS----DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILK---- 52
MLGGLYGDLPPP+ D+DKPT +VWSS+ KMAPPTLRKPS+ FAPP ++L+
Sbjct: 1 MLGGLYGDLPPPTSAAGDDDKPT---ASVWSSATKMAPPTLRKPSATFAPPTSLLRNQHP 57
Query: 53 -PQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALP--QPALVGVTSTVIEEYDPARPNDYE 109
P + PK + +P +S A + +P PALV V STV+EEYDPARPNDYE
Sbjct: 58 RPAAAPKPSAVQQQQQPLASAATTTT------VPSFHPALVAVQSTVLEEYDPARPNDYE 111
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERRE---------REERENASASRLNMSGEE 160
DYR++K K+A DAE+++EL+RRR+E +ERER REE+ AS+ LN+SGEE
Sbjct: 112 DYRKDKLKRAKDAEMKKELDRRRREDQEREREREQREAEARLREEQSRASS--LNISGEE 169
Query: 161 AWKRRAAMSS--GGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
AWKRRAAMS GG P R+ SPP G GGF+I S +SGLGLGAGGQMTAAQRM
Sbjct: 170 AWKRRAAMSGAGGGTPQRASSPP------HGDAGGFSIPGSSSSGLGLGAGGQMTAAQRM 223
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVL 278
MAKMGWKEGQGLG+QEQGIT PL+ARKTDRRAGVIV+ S S ++ +SVNF G PTRV+
Sbjct: 224 MAKMGWKEGQGLGKQEQGITAPLVARKTDRRAGVIVDES---SSRRPRSVNFEGQPTRVV 280
Query: 279 LLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQT 338
LLRNM+GPGEVDDELEDE+ SEC+K+G V RVLIFEIT+ NFP DEAVRIFV FER+E +
Sbjct: 281 LLRNMIGPGEVDDELEDEIASECSKFGAVLRVLIFEITQANFPADEAVRIFVLFERTEDS 340
Query: 339 TKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
TKAL++L+GR+FGGR+V ATF+DE RF +NELAP+PGE+ GF
Sbjct: 341 TKALVELEGRYFGGRIVHATFFDEGRFERNELAPMPGEVAGF 382
>gi|20521490|dbj|BAB91997.1| putative DNA-damage repair protein DRT111 precursor [Oryza sativa
Japonica Group]
gi|21328134|dbj|BAC00713.1| putative DNA-damage repair protein DRT111 precursor [Oryza sativa
Japonica Group]
gi|215769314|dbj|BAH01543.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 368
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 251/383 (65%), Positives = 296/383 (77%), Gaps = 19/383 (4%)
Query: 1 MLGGLYGDLPPPS---DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKP 57
MLGGLYGDLPPPS D+DKP+ WSS+AKMAPPTLRKP + FAPP ++L+ S+P
Sbjct: 1 MLGGLYGDLPPPSSSADDDKPSAAG---WSSAAKMAPPTLRKPPATFAPPPSVLR-NSRP 56
Query: 58 KTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKK 117
+ P + I + + QPALV V STV+EEYDPARPNDYEDYR++K K
Sbjct: 57 APKAPAAQPPPPPTLPIETTTSTSF---QPALVAVQSTVMEEYDPARPNDYEDYRKDKLK 113
Query: 118 KAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRS 177
+A +AE+R+ELERRR+E EERER + LN+SGEEAWKRRAAMS P S
Sbjct: 114 RAKEAEVRKELERRRREEEERERERELREREGRDA-LNISGEEAWKRRAAMSGSAAPRPS 172
Query: 178 PSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGI 237
SPP G GF IG S +SGLGLGAGGQMTAAQRMMA+MGWKEGQGLG+QEQGI
Sbjct: 173 SSPP--------HGDGFAIGNSSSSGLGLGAGGQMTAAQRMMARMGWKEGQGLGKQEQGI 224
Query: 238 TTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEV 297
T PL+A+KTDRR GVIV+ + +K EKK KSVNF+GPPTRVLLLRNMVGPGEVDDELE+EV
Sbjct: 225 TAPLVAKKTDRRGGVIVDENSSKQEKKPKSVNFDGPPTRVLLLRNMVGPGEVDDELEEEV 284
Query: 298 GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
SEC+KYGTV RVLIFEIT+ +FP +EAVRIF+ FER+E+ TKA+IDL+GRFFGGRVVRA
Sbjct: 285 ASECSKYGTVLRVLIFEITQADFPAEEAVRIFILFERAEEATKAMIDLEGRFFGGRVVRA 344
Query: 358 TFYDEERFSKNELAPLPGEIPGF 380
TF+DEERF KN+LAP+PGE+ GF
Sbjct: 345 TFFDEERFGKNQLAPMPGEVAGF 367
>gi|218188368|gb|EEC70795.1| hypothetical protein OsI_02243 [Oryza sativa Indica Group]
Length = 368
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 250/383 (65%), Positives = 296/383 (77%), Gaps = 19/383 (4%)
Query: 1 MLGGLYGDLPPPS---DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKP 57
MLGGLYGDLPPPS D+DKP+ WSS+AKMAPPTLRKP + FAPP ++L+ S+P
Sbjct: 1 MLGGLYGDLPPPSSSADDDKPSAAG---WSSAAKMAPPTLRKPPATFAPPPSVLR-NSRP 56
Query: 58 KTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKK 117
+ P + + + + QPALV V STV+EEYDPARPNDYEDYR++K K
Sbjct: 57 APKAPAAQPPPPPTLPVETTTSTSF---QPALVAVQSTVMEEYDPARPNDYEDYRKDKLK 113
Query: 118 KAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRS 177
+A +AE+R+ELERRR+E EERER + LN+SGEEAWKRRAAMS P S
Sbjct: 114 RAKEAEVRKELERRRREEEERERERELREREGRDA-LNISGEEAWKRRAAMSGSAAPRPS 172
Query: 178 PSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGI 237
SPP G GF IG S +SGLGLGAGGQMTAAQRMMA+MGWKEGQGLG+QEQGI
Sbjct: 173 SSPP--------HGDGFAIGNSSSSGLGLGAGGQMTAAQRMMARMGWKEGQGLGKQEQGI 224
Query: 238 TTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEV 297
T PL+A+KTDRR GVIV+ + +K EKK KSVNF+GPPTRVLLLRNMVGPGEVDDELE+EV
Sbjct: 225 TAPLVAKKTDRRGGVIVDENSSKQEKKPKSVNFDGPPTRVLLLRNMVGPGEVDDELEEEV 284
Query: 298 GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
SEC+KYGTV RVLIFEIT+ +FP +EAVRIF+ FER+E+ TKA+IDL+GRFFGGRVVRA
Sbjct: 285 ASECSKYGTVLRVLIFEITQADFPAEEAVRIFILFERAEEATKAMIDLEGRFFGGRVVRA 344
Query: 358 TFYDEERFSKNELAPLPGEIPGF 380
TF+DEERF KN+LAP+PGE+ GF
Sbjct: 345 TFFDEERFGKNQLAPMPGEVAGF 367
>gi|168057021|ref|XP_001780515.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667993|gb|EDQ54609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 382
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 223/427 (52%), Positives = 271/427 (63%), Gaps = 98/427 (22%)
Query: 1 MLGGLYGDLPPPS----DEDKPTNTTT--------TVWSSSAKMAPPTLRKPSSIFAPPQ 48
MLGGLYGDLPPPS DE NT +VWS+S K+AP +RKP+ +FAPP
Sbjct: 1 MLGGLYGDLPPPSASGDDEGSGKNTGVPSSGPVGASVWSNS-KLAPSNVRKPN-LFAPPT 58
Query: 49 TILKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDY 108
++L+ Q P QPALV V+S V+EEYDPARPNDY
Sbjct: 59 SVLRNQPVPV---------------------------QPALVAVSSRVLEEYDPARPNDY 91
Query: 109 EDY----------------------RREKKKKAVDAEIRRELERRRQEGEERERREREER 146
++Y E +++ +A +R+ R +E E + + E+R
Sbjct: 92 DEYCRERRRRKIEEEMRMEVERRRQEEEDREREREALMRQRELEREREMEREKEQGPEQR 151
Query: 147 ENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSP-------PPVNVESGGGGGGFTIGKS 199
+ L +SGEEAWKRRA +S+ V SPSP PP + E GF+ K+
Sbjct: 152 -----AALRISGEEAWKRRAMLSAARVADSSPSPARARSPSPPKSSE------GFSASKT 200
Query: 200 ETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASEN 259
+ MTAAQRMMA+MGWKEGQGLG+QEQGIT PLMARKTD+RAGVIVNA+
Sbjct: 201 SS----------MTAAQRMMARMGWKEGQGLGKQEQGITVPLMARKTDKRAGVIVNAALT 250
Query: 260 KS-----EKK--VKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLI 312
+ +KK VK V+ +G PTRV+LLRNMVGPGEVD ELEDE+ SEC+KYGTVTRVLI
Sbjct: 251 PAAAPVVDKKPAVKGVSISGSPTRVVLLRNMVGPGEVDSELEDEISSECSKYGTVTRVLI 310
Query: 313 FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
FEITEPNFP EAVRIFVQFERSEQTTKAL+DLDGRFFGGRVVRA+FYDE+RF++NELAP
Sbjct: 311 FEITEPNFPATEAVRIFVQFERSEQTTKALVDLDGRFFGGRVVRASFYDEDRFNRNELAP 370
Query: 373 LPGEIPG 379
PGE+P
Sbjct: 371 FPGEVPA 377
>gi|297740820|emb|CBI31002.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 160/170 (94%), Positives = 167/170 (98%)
Query: 212 MTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFN 271
MTAAQRMMAKMGWKEGQGLG+QEQGITTPLMA+KTDRRAGVIVNASE+K EKKVKSVNFN
Sbjct: 1 MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIVNASESKPEKKVKSVNFN 60
Query: 272 GPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
PPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ
Sbjct: 61 SPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 120
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGFT 381
FERSE+TTKAL+DLDGRFFGGRVV ATFYDE+RFSKNELAP+PGEIPGFT
Sbjct: 121 FERSEETTKALVDLDGRFFGGRVVHATFYDEDRFSKNELAPMPGEIPGFT 170
>gi|414885814|tpg|DAA61828.1| TPA: hypothetical protein ZEAMMB73_697630 [Zea mays]
Length = 291
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 180/300 (60%), Positives = 214/300 (71%), Gaps = 32/300 (10%)
Query: 1 MLGGLYGDLPPPS---DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQS-- 55
MLGGLYGDLPPPS DEDK +T +VWSS+ KMAPPTLRKPS+ FAPP +IL+ Q
Sbjct: 1 MLGGLYGDLPPPSSAGDEDK--ASTASVWSSATKMAPPTLRKPSTTFAPPPSILRNQHLR 58
Query: 56 KPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREK 115
PK T P P +A P A + QPA V V STV+EEYDPARPNDYEDYR++K
Sbjct: 59 PPKATYIPAP------PVVAAEPAPATSF-QPAFVAVQSTVLEEYDPARPNDYEDYRKDK 111
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERE----------NASASRLNMSGEEAWKRR 165
++A +AE+ +ELERRR+E ++RER + + AS LN+SGEEAWKRR
Sbjct: 112 LRRAKEAELNKELERRRREEQDREREREQREREAREREEKDYQSRASSLNISGEEAWKRR 171
Query: 166 AAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWK 225
AAMS G R+PS PP G GF IG S ++GLG+GAGGQMTAAQRMMAKMGWK
Sbjct: 172 AAMSGSGSAARTPSSPP-------HGDGFAIGSSSSAGLGVGAGGQMTAAQRMMAKMGWK 224
Query: 226 EGQGLGRQEQGITTPLMARKTDRRAGVIVNASENK-SEKKVKSVNFNGPPTRVLLLRNMV 284
EGQGLG+QEQGIT PL+A+KTDRR GVIV+ S ++ EKK +SVNF+G PTRVLLLRNMV
Sbjct: 225 EGQGLGKQEQGITAPLVAKKTDRRGGVIVDESSSRPPEKKPRSVNFDGQPTRVLLLRNMV 284
>gi|302825086|ref|XP_002994178.1| hypothetical protein SELMODRAFT_163366 [Selaginella moellendorffii]
gi|300137979|gb|EFJ04768.1| hypothetical protein SELMODRAFT_163366 [Selaginella moellendorffii]
Length = 399
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 254/400 (63%), Gaps = 26/400 (6%)
Query: 1 MLGGLYGDLPPPSDEDKPTNTTT----TVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSK 56
MLGGLYGDLPPPS + + ++ + M PP + + IFA P ++L+ QS
Sbjct: 1 MLGGLYGDLPPPSQSSSASAEDSAKKHSLIGNGKLMTPPAALRKAGIFAAPPSVLRNQSS 60
Query: 57 PKTTQNSL------PTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYED 110
K +P + A A A+ V V +I+EYDPARPNDYE+
Sbjct: 61 AKAPPPPRQPPVVATVKPVAVAATPAVVAAAVAVTPTPPVAVPVCIIDEYDPARPNDYEE 120
Query: 111 YRREKKKKAVDAEIRRELERRRQEGEERERR----EREERENASASRLNMSGEEAWKRRA 166
Y R++K+K ++ E++R++ERRR+E EE+ER ++E E +++SGEEAWKRRA
Sbjct: 121 YCRDRKRKKMEKELKRDMERRREEEEEKEREREVARQKELERQHKEDVHISGEEAWKRRA 180
Query: 167 AMSSGGVPPRSPSPPPVNV---------ESGGGGGGFTIGKSETSGLGLGAGGQMTAAQR 217
+S+GG S S + G + G G MTAAQR
Sbjct: 181 MLSAGGGRGSSSSFSAAGPSDIPPPSSSQVEGHHSHGGKQQQSQGGGNGNNSGGMTAAQR 240
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGP-PTR 276
MMA+MGW+EGQGLG+QEQGITTPLMARKTD+RAGVIVNA E K K+ P TR
Sbjct: 241 MMARMGWREGQGLGKQEQGITTPLMARKTDKRAGVIVNAGELK--KQQNQQQQQRPVATR 298
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
V+LLRNMVGPGEVD ELE+EV SEC+K+G VT VLIFEITE ++ EAVRIFVQFER++
Sbjct: 299 VVLLRNMVGPGEVDAELEEEVASECSKFGVVTSVLIFEITEHDYAPTEAVRIFVQFERAD 358
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
Q +KAL DLDGRFFGGRVVR +++DEERF++NELAPLPG+
Sbjct: 359 QASKALADLDGRFFGGRVVRGSYFDEERFARNELAPLPGD 398
>gi|302764030|ref|XP_002965436.1| hypothetical protein SELMODRAFT_84505 [Selaginella moellendorffii]
gi|300166250|gb|EFJ32856.1| hypothetical protein SELMODRAFT_84505 [Selaginella moellendorffii]
Length = 393
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 248/394 (62%), Gaps = 20/394 (5%)
Query: 1 MLGGLYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTT 60
MLGGLYGDLPPPS + + + M PP + + IFA P ++L+ QS K
Sbjct: 1 MLGGLYGDLPPPSQSSSASAEDSAKKHNGKLMTPPAALRKAGIFAAPPSVLRNQSSAKAP 60
Query: 61 QNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTS------TVIEEYDPARPNDYEDYRRE 114
++ A + V T +I+EYDPARPNDYE+Y R+
Sbjct: 61 PPPRQPPVVAAVKPVAVAATPAVVAAAVAVTPTPPVAVPVCIIDEYDPARPNDYEEYCRD 120
Query: 115 KKKKAVDAEIRRELERRRQEGEERERR----EREERENASASRLNMSGEEAWKRRAAMSS 170
+K+K ++ E++R++ERRR+E EE+ER ++E E +++SGEEAWKRRA +S+
Sbjct: 121 RKRKKMEKELKRDMERRREEEEEKEREREVARQKELERQHKEDVHISGEEAWKRRAMLSA 180
Query: 171 GGVPPRSPSPPPVNVESGGG-------GGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMG 223
GG S S G + G G M+AAQRMMA+MG
Sbjct: 181 GGGRGSSSSFSAAGPSDIPPPSSSQVEGHHGGKQQQSQGGGNGNNSGGMSAAQRMMARMG 240
Query: 224 WKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGP-PTRVLLLRN 282
W+EGQGLG+QEQGITTPLMARKTD+RAGVIVNA E K K+ P TRV+LLRN
Sbjct: 241 WREGQGLGKQEQGITTPLMARKTDKRAGVIVNAGELK--KQQNQQQQQRPVATRVVLLRN 298
Query: 283 MVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKAL 342
MVGPGEVD ELE+EV SEC+K+G VT VLIFEITE ++ EAVRIFVQFER++Q +KAL
Sbjct: 299 MVGPGEVDAELEEEVASECSKFGVVTSVLIFEITEHDYAPTEAVRIFVQFERADQASKAL 358
Query: 343 IDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
DLDGRFFGGRVVR +++DEERF++NELAPLPG+
Sbjct: 359 ADLDGRFFGGRVVRGSYFDEERFARNELAPLPGD 392
>gi|449531990|ref|XP_004172968.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like, partial [Cucumis sativus]
Length = 145
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/145 (91%), Positives = 142/145 (97%)
Query: 237 ITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDE 296
ITTPLMA+KTD RAGVIVNA++ KSEKKVKSVNFNG PTRVLLLRNMVGPGEVDDELE+E
Sbjct: 1 ITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEE 60
Query: 297 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVR 356
VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE+TTKAL+DLDGR+FGGRVVR
Sbjct: 61 VGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVR 120
Query: 357 ATFYDEERFSKNELAPLPGEIPGFT 381
ATFYDEERFSKNELAP+PGE+PGFT
Sbjct: 121 ATFYDEERFSKNELAPMPGEVPGFT 145
>gi|384249327|gb|EIE22809.1| splicing factor [Coccomyxa subellipsoidea C-169]
Length = 281
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/290 (48%), Positives = 187/290 (64%), Gaps = 41/290 (14%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASR---- 153
+EYDP RPND+E+ RR ++ + +AE LE RQE R R E R
Sbjct: 25 DEYDPGRPNDFEEVRRSREVQRKEAE----LEVGRQE------RLRLEALQQQVGRDLIN 74
Query: 154 LNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMT 213
LN+SGEEA+ +RA +S+ G G G T G+ GL +
Sbjct: 75 LNISGEEAFLQRARISNRG-----------------GTSGVT-GRDSKDSKGL------S 110
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVK---SVNF 270
A+RMM KMGWKEGQGLG+ +QGI TPL+A+KTD R+GVIVNAS + + + + +F
Sbjct: 111 FAERMMEKMGWKEGQGLGKSKQGIVTPLIAQKTDSRSGVIVNASSSAAHQDKRPRVGTSF 170
Query: 271 NGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
GPP+RV+LLRNMVGPGEVD+ELEDE+G EC+K+G V V+IFE+TEP FP +++VRIFV
Sbjct: 171 QGPPSRVVLLRNMVGPGEVDEELEDEIGLECSKFGNVQSVMIFEVTEPGFPAEQSVRIFV 230
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
+F+R E TKA++DL GRFFGGR V+ATF+D R+ + +LAP E+ F
Sbjct: 231 EFDREEGATKAVVDLGGRFFGGRTVQATFFDLSRWGRKDLAPNAEELSTF 280
>gi|224160919|ref|XP_002338271.1| predicted protein [Populus trichocarpa]
gi|222871588|gb|EEF08719.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 159/208 (76%), Gaps = 19/208 (9%)
Query: 78 PDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEE 137
PD+ A PQP LVGV S V+EEYDPARPNDYEDYRREKK+KA++AE RE+ERRRQE EE
Sbjct: 8 PDEVA--PQPELVGVNSVVVEEYDPARPNDYEDYRREKKRKAMEAERLREIERRRQEEEE 65
Query: 138 RERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIG 197
ER ERE +N+ GEEAW+RRAAM SGGV PRS SPP G GF+I
Sbjct: 66 EEREREREREKDRDRDVNIFGEEAWRRRAAM-SGGV-PRSSSPPR-------NGDGFSI- 115
Query: 198 KSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS 257
T GLG+GAGGQMTAAQRMMAKMGWKEGQGLG+QEQGIT PLMA+KTDRRA VIVNA
Sbjct: 116 --RTVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITMPLMAKKTDRRAAVIVNA- 172
Query: 258 ENKSEKKVKSVNFNG-PPTRVLLLRNMV 284
SEKKVKSVNFNG PPT VLLLR V
Sbjct: 173 ---SEKKVKSVNFNGTPPTWVLLLRQQV 197
>gi|224058061|ref|XP_002299442.1| predicted protein [Populus trichocarpa]
gi|222846700|gb|EEE84247.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/205 (66%), Positives = 151/205 (73%), Gaps = 21/205 (10%)
Query: 78 PDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEE 137
PD+ A PQ LV V S V+EEYDPA+PNDYEDYRREKK+KA++AE R E
Sbjct: 3 PDEVA--PQSELVRVNSVVVEEYDPAKPNDYEDYRREKKRKAMEAE-----RLREIERRR 55
Query: 138 RERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIG 197
+E E ERE +N+SGEEAW+RRAAMS GGVP RS SPP G GF+IG
Sbjct: 56 QEEEEEREREKDRDRDVNISGEEAWRRRAAMS-GGVP-RSSSPPR-------NGDGFSIG 106
Query: 198 KSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS 257
S T GLG+GAGGQMTAAQRMMAKMGWKEGQGL +QEQGITT LM +KTDRRAGVIVNA
Sbjct: 107 TSGTVGLGVGAGGQMTAAQRMMAKMGWKEGQGLKKQEQGITTTLMVKKTDRRAGVIVNA- 165
Query: 258 ENKSEKKVKSVNFNG-PPTRVLLLR 281
SEKKVKSVNFNG PPTRVLL+R
Sbjct: 166 ---SEKKVKSVNFNGTPPTRVLLIR 187
>gi|255087508|ref|XP_002505677.1| predicted protein [Micromonas sp. RCC299]
gi|226520947|gb|ACO66935.1| predicted protein [Micromonas sp. RCC299]
Length = 471
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 185/363 (50%), Gaps = 92/363 (25%)
Query: 83 ALPQP--ALVGVTST-VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERE 139
A+P+P A G S V +EY P +PN YED R + ++ + R ER+R E E +
Sbjct: 127 AVPEPSAATYGTLSAEVADEYQPGKPNSYEDVVRARARRVATEQAARTRERQRVELERQR 186
Query: 140 RREREERENASA--------SRLNMSGEEAWKRRAAMSSGGVPP---------------- 175
R EER A S LN++GEEA+ RRA + G V P
Sbjct: 187 RELEEERRTAQKAAGTAPDRSSLNVTGEEAFARRATVRFGKVEPAASKLLAASNEVEPER 246
Query: 176 --RSPSP--PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLG 231
R+P P PP V+ G +T AQ+MM KMGWKEG GLG
Sbjct: 247 AERTPEPQKPPAPVKDKG----------------------LTLAQKMMEKMGWKEGSGLG 284
Query: 232 RQEQGITTPLMARKTDRRAGVIVNASE---NKSEKKVKSVNFNG---------------- 272
+ QG+TTPLMA+K R+G+IVNA E N+S + V+ G
Sbjct: 285 KDGQGMTTPLMAQKDGIRSGIIVNAPEMFPNRS-TIIGEVSAEGDGAHTLLGAPAFVSSG 343
Query: 273 -------------------PPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF 313
PTRVLLLRN+ GPGEVD +LEDEV EC ++G V RV+IF
Sbjct: 344 SSLAGSAVVPAVDEGDKPATPTRVLLLRNLTGPGEVDGDLEDEVAEECERFGAVVRVVIF 403
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPL 373
E+T+ FP EAVRIF +F +E + +++DGRFFGGR VRAT YDE +F N+L P
Sbjct: 404 EVTDAGFPAPEAVRIFAEFVEAESAERCRLEMDGRFFGGRTVRATSYDESKFFANDLGPQ 463
Query: 374 PGE 376
PGE
Sbjct: 464 PGE 466
>gi|302832155|ref|XP_002947642.1| hypothetical protein VOLCADRAFT_87981 [Volvox carteri f.
nagariensis]
gi|300266990|gb|EFJ51175.1| hypothetical protein VOLCADRAFT_87981 [Volvox carteri f.
nagariensis]
Length = 441
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 176/313 (56%), Gaps = 30/313 (9%)
Query: 95 TVIEEYDPARPNDYEDYRREKKKKAVDA-----------EIRRELERRRQEGEERERRER 143
T+ +EYDP RPNDYE+ +++ A E+ E ER R++ EER R
Sbjct: 128 TIEDEYDPMRPNDYEEVMAARERARKAAEAEAERLAKLKEMEAEAERLRKQEEERARSAA 187
Query: 144 EERENASASRLN---MSGEEAWKRRAAMSSGG--VPPRSPSPPPVNVESGGGGGGFTIGK 198
+A MS EE +RRAAM G R P G GGGG
Sbjct: 188 AAGSSAGGGGSGSGVMSMEEYERRRAAMGMTGDDAFARRGRMPTAPGGPGAGGGGGGGSS 247
Query: 199 SETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA-- 256
G G+ MT AQ+++ KMGW+EG+GLG+ QGI+ PL+A+KT++RA VIV A
Sbjct: 248 GPGGDEGAGSNKGMTLAQKLLEKMGWREGEGLGKNRQGISNPLVAQKTNQRAAVIVEAPP 307
Query: 257 ------------SENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKY 304
SE K++K G P+RV+ +RNMVGPG+VD+ELE+EVG E KY
Sbjct: 308 APNKPATGVFASSEGPDAKRLKGAVLTGVPSRVICMRNMVGPGQVDEELEEEVGQELTKY 367
Query: 305 GTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
G V VLIFE+T P + +EAVRIFVQFER E TKA +DL GRFF GR VR +F+ EER
Sbjct: 368 GKVLDVLIFEVTTPGYVEEEAVRIFVQFERQESATKAAVDLQGRFFAGRSVRVSFFPEER 427
Query: 365 FSKNELAPLPGEI 377
F +LAP GE
Sbjct: 428 FMATDLAPKQGEF 440
>gi|449490730|ref|XP_004158690.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Cucumis sativus]
Length = 230
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 149/231 (64%), Positives = 177/231 (76%), Gaps = 16/231 (6%)
Query: 1 MLGGLYGDLPPPS--DEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPK 58
MLGGLYGDLPPPS +EDKPTN+T VWSSS KMAPPTLRKPSS+FAP QT+L+ QSK K
Sbjct: 1 MLGGLYGDLPPPSSAEEDKPTNST--VWSSSTKMAPPTLRKPSSVFAP-QTVLRSQSKIK 57
Query: 59 TTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKK 118
++ P S+ A P A A+ QPALV VTSTV+EEYDPARPNDYE+YR EKK+K
Sbjct: 58 AATSTHPKVSVSTQVEASQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRVEKKRK 117
Query: 119 AVDAEIRRELERRRQEGEERERREREERENA-SASRLNMSGEEAWKRRAAMSSGGVPPRS 177
A++AE+R+ELERRRQE EERE++EREERE S SR+N+SGEEAW+RRAA SG +P
Sbjct: 118 AMEAEMRKELERRRQEEEEREKKEREEREREHSDSRINISGEEAWRRRAA-KSGAIPRSP 176
Query: 178 PSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQ 228
P V+ GF+IGKSET GLG+GAGGQMTAAQRMM K+ ++ GQ
Sbjct: 177 SPPSSVD--------GFSIGKSETGGLGVGAGGQMTAAQRMM-KLVYEYGQ 218
>gi|405961750|gb|EKC27501.1| Xanthine dehydrogenase [Crassostrea gigas]
Length = 1588
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 197/414 (47%), Gaps = 78/414 (18%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTL--RKPSS----------IFAPPQTILK 52
LY L ++ + WSS+ K+ L +K SS P LK
Sbjct: 1198 LYDGLDIDKEDGGSSKPVVAGWSSNYKLLQSQLQAKKASSSQGRKSRHGGATLAPVVDLK 1257
Query: 53 PQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQ---PALVGVTSTVIEEYDPARPNDYE 109
+ + N + R P ++ + + +P P+L GV +EYDP RPNDYE
Sbjct: 1258 KSNDSELYFNQITGRIERCPNVSANIGSSPFIPSEPVPSLTGVA----DEYDPLRPNDYE 1313
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERE--------------------------RRER 143
D+ KK+K + R E R+R E+R
Sbjct: 1314 DFV--KKRKEQRHKEREEDMRKRDMDEDRHPRRRRDRDRDRDRDRDRDDYDRRGGGGGGG 1371
Query: 144 EERENASASRLNMSGEEAWKRRAAMSSGG--VPPRSPSPPPVNVESGGGGGGFTIGKSET 201
E E A R ++ K R SG +P RS SPP
Sbjct: 1372 GEMERAQRRRDEEEEDDYEKPRKPDQSGSPIMPNRSNSPP-------------------- 1411
Query: 202 SGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS---- 257
G +G GG + A ++MAK G+KEGQGLG+ EQG++T L KT +R G I++
Sbjct: 1412 MGYSIGLGG--SVASKIMAKYGYKEGQGLGKLEQGMSTALFVEKTSKRGGKIIHEKDLPK 1469
Query: 258 -ENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEIT 316
E E + + N P++V+LLRNMVGPGEVD +LE E EC KYG V + +IFEI
Sbjct: 1470 LEPPKELSISNTNLMKNPSKVILLRNMVGPGEVDKDLEPETAEECTKYGKVIKCVIFEI- 1528
Query: 317 EPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
P+ +EAVRIFV+FER + KA+IDL+GR+FGGR+V+A FY+ ++F + +L
Sbjct: 1529 -PHGDDEEAVRIFVEFERVDSAIKAIIDLNGRYFGGRIVKACFYNLDKFRRLDL 1581
>gi|156380987|ref|XP_001632048.1| predicted protein [Nematostella vectensis]
gi|156219098|gb|EDO39985.1| predicted protein [Nematostella vectensis]
Length = 396
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 190/376 (50%), Gaps = 37/376 (9%)
Query: 26 WSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSLPTRPHSSPAIAPSPD------ 79
WS+S K+ L + I P + P +K K+ SL + I D
Sbjct: 25 WSNSLKLMQTQLHRKKVIQNKP---VFPTTKSKSLTPSLLGKGLQKKLIVEEKDFGTEEI 81
Query: 80 ---DAAALPQPALVGVTSTVI--EEYDPARPNDYEDYRRE-----------KKKKAVDAE 123
D +P+P + S + +EYDP +PNDYE + + ++ + D
Sbjct: 82 SHGDLHTVPEPFIETDASLAMIEDEYDPLKPNDYEVVKEKIREKRERDRREERDRERDVR 141
Query: 124 IRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRS-----P 178
+R ER +++ ER+R + RE R + R ++ + PP S P
Sbjct: 142 MRERFEREQEKDRERDRDKERPRERRREGRRDDDDYHRPSSRRSVGAAIAPPSSLLESEP 201
Query: 179 SPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGIT 238
P + G G E + LG A +MAK GWK+GQGLG+ EQGI
Sbjct: 202 IVPQKEPDPSIDGRPLVTGDKEKTDLGFAVNA---VASSIMAKYGWKDGQGLGKSEQGIN 258
Query: 239 TPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGP---PTRVLLLRNMVGPGEVDDELED 295
T L KT +R G I+N + ++ + + + G P++V+LLRNMVGPGEVDD+L+
Sbjct: 259 TCLQVEKTSKRGGKIINQEKEAAKSQAEGDSLVGAMKNPSKVVLLRNMVGPGEVDDDLQP 318
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E ECAKYG V +V+I+EI P DEAVRIFV+F R E KA++DL+GR+FGGR V
Sbjct: 319 ETAEECAKYGEVVKVIIYEIP-VGAPDDEAVRIFVEFTRMESAIKAVVDLNGRYFGGRTV 377
Query: 356 RATFYDEERFSKNELA 371
+A F++ ++F + +LA
Sbjct: 378 KANFFNLDKFRRLDLA 393
>gi|109706823|gb|ABG42998.1| splicing factor 45 [Bombyx mori]
Length = 392
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 203/415 (48%), Gaps = 76/415 (18%)
Query: 5 LYGDLPPPSDEDKPTNTTTTV--WSSSAKMAPPTLR-KPSSIFAP-------------PQ 48
LY DL + T TT V WSS K+ L+ K +++ P P
Sbjct: 3 LYDDL-----DTIKTRTTEKVAAWSSGIKLLQSQLQLKKAAVTQPKREALRRSTQVLTPV 57
Query: 49 TILKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDY 108
LK +SK + NS SSP I P A+ + V EYDP PNDY
Sbjct: 58 IDLKSKSKDEEETNS------SSPKIQPKTITASL----NVRDFDWNVANEYDPMWPNDY 107
Query: 109 EDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAM 168
E +E + K + ++ R + R+++ + + + A + E +RA
Sbjct: 108 EKVAKELQAKRLQSDDRGDRWDRKRKSRLGDDEDIIPEKTLVAMQPEEEEAEEISKRATG 167
Query: 169 SSGGVPP----RSPSPPPVN-VESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMG 223
+ PP S SPPP++ + GF+IG G GA + A ++MAK G
Sbjct: 168 VAIAPPPSLTTESSSPPPISALPQATASAGFSIG-------GYGAS---SVAAKIMAKYG 217
Query: 224 WKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENK----------------------- 260
+KEGQGLG++EQG++ L KT +R G I++ +N
Sbjct: 218 FKEGQGLGKKEQGMSVALQVEKTSKRGGRIIHEKDNNVMPPPGFTMQAPAGPDSPNTSSN 277
Query: 261 ----SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 315
S + P++V+LLRNMVGPG+VD+ELE EV EC KYG V +VLIFE+
Sbjct: 278 SPLLSRNEPSITEIMKTPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVVKVLIFEM 337
Query: 316 TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
PN P DEAVRIFV+F+R E KA++DL+GRFFGGR V+A FYD E+F+ +L
Sbjct: 338 --PNVPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYDVEKFNSLQL 390
>gi|357623541|gb|EHJ74651.1| splicing factor 45 [Danaus plexippus]
Length = 394
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 169/315 (53%), Gaps = 57/315 (18%)
Query: 96 VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL- 154
V EYDP PNDYE +E + K ++ + E R E ER R+R+ R N +
Sbjct: 95 VANEYDPMWPNDYEKVAKEMQAKRLNLDGSNE----RTERSERSERKRKTRFNDEEDVIP 150
Query: 155 ---------NMSGEEAWKRRAAMSSGGVPP----RSPSPPPVNVESGGGGGGFTIGKSET 201
E +R A + PP S SPPPV + + GF++G
Sbjct: 151 EKTLVPMQPEEEEVEEKTKRTAGVAIAPPPSLTIESLSPPPV-IPTPTASQGFSLG---- 205
Query: 202 SGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA--SEN 259
G GA + A ++MAK G+KEGQGLG++EQG++ L KT +R G I++ S N
Sbjct: 206 ---GYGAS---SVAAKIMAKYGFKEGQGLGKKEQGMSVALQVEKTSKRGGRIIHEKDSTN 259
Query: 260 KSEKKVKSVNFNGP-----------------------PTRVLLLRNMVGPGEVDDELEDE 296
+++GP P++V+LLRNMVGPG+VD+ELE E
Sbjct: 260 MMPPSFAMTSYSGPDSPNASNSPHSRQEPSITEIMKTPSKVVLLRNMVGPGDVDEELEPE 319
Query: 297 VGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
V EC KYG V +VLIFE+ PN P DEAVRIFV+F+R E KA++DL+GRFFGGR V
Sbjct: 320 VKDECNTKYGEVVKVLIFEM--PNAPSDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQV 377
Query: 356 RATFYDEERFSKNEL 370
+A FYD E+F+ +L
Sbjct: 378 KAGFYDVEKFASLQL 392
>gi|224113627|ref|XP_002332520.1| predicted protein [Populus trichocarpa]
gi|222832632|gb|EEE71109.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/97 (91%), Positives = 93/97 (95%)
Query: 284 VGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALI 343
VGPGEVDDELEDEV SECAKYGTVTRVLIFEITE NFP +EAVRIF+QFERSE+TTKALI
Sbjct: 1 VGPGEVDDELEDEVASECAKYGTVTRVLIFEITELNFPREEAVRIFIQFERSEETTKALI 60
Query: 344 DLDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
DLDGRFFGG VVRATFYDEERFSKNELAP+PGEIPGF
Sbjct: 61 DLDGRFFGGNVVRATFYDEERFSKNELAPIPGEIPGF 97
>gi|357017175|gb|AET50616.1| hypothetical protein [Eimeria tenella]
Length = 455
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 156/281 (55%), Gaps = 48/281 (17%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMS 157
+EYDP++PNDY +EK ++ + R ELER RQ+ E+++ + E N +A
Sbjct: 207 QEYDPSKPNDYTAIHKEKMRQ----QQREELERLRQQELEKQKHDEEAARNGAA------ 256
Query: 158 GEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAG---GQMTA 214
G GG T+ E L + + T
Sbjct: 257 --------------------------------GDGGETVTSPEPQAPLLPSYIDPNKKTF 284
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKV-KSVNFNGP 273
A RMM KMGWK+G+GLG +QGIT PL+ARKT R+G+IV + + +V ++V FN
Sbjct: 285 AARMMEKMGWKQGEGLGANKQGITAPLVARKTAMRSGIIVQGQDVTTLGQVPRAVTFNMA 344
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PTR+LLL NMVG G+VD +L++E E AK G + +V IFE P D AVRIF ++E
Sbjct: 345 PTRILLLLNMVGRGQVDSDLKEETEEEAAKLGNLLQVRIFEAA--GVPDDCAVRIFCEYE 402
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLP 374
R E+ T+AL+ +GR FGGR V+A FY EERF++ +L P P
Sbjct: 403 RKEEATRALLTFNGRAFGGRTVKAKFYSEERFARGDLRPDP 443
>gi|145356730|ref|XP_001422579.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582822|gb|ABP00896.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 333
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/285 (42%), Positives = 155/285 (54%), Gaps = 38/285 (13%)
Query: 100 YDPARPNDYEDYRREKKKKA-------VDAEIRRELERRRQEGE-ERERREREERENASA 151
YDPA PNDYE E+ ++A + E+R+ELE +R+ E +R +REE
Sbjct: 78 YDPAAPNDYERTLAERAERARRRRDLNANEELRKELESKRKAMESQRSAMDREEV----- 132
Query: 152 SRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQ 211
L + G EA +RR AM R + S G GKS
Sbjct: 133 --LGVDGREARRRRLAMGRDAGASR-------DTNSASGAQKANKGKS------------ 171
Query: 212 MTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFN 271
AA++MM KMGW +G+GLG+ EQG+TTPL RK +G IVNA+ EKK V
Sbjct: 172 --AAEKMMEKMGWTKGRGLGKSEQGMTTPLEVRKDSATSGKIVNAAPVIFEKK--KVPLR 227
Query: 272 GPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
G PT VLLLRN+V GEV D LED+V C K+G V RV IFEI E F +E VRIFV+
Sbjct: 228 GKPTPVLLLRNVVLAGEVVDTLEDDVAEHCEKFGDVVRVFIFEIEEEGFAKEETVRIFVE 287
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
F ++ A +LDGR F RVV+A++YD ERF +L P GE
Sbjct: 288 FVDTKTAISAGAELDGRVFANRVVKASYYDVERFEAGDLGPQAGE 332
>gi|114051960|ref|NP_001040441.1| RNA binding motif protein 17 [Bombyx mori]
gi|95102902|gb|ABF51392.1| RNA binding motif protein 17 [Bombyx mori]
Length = 392
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 203/415 (48%), Gaps = 76/415 (18%)
Query: 5 LYGDLPPPSDEDKPTNTTTTV--WSSSAKMAPPTLR-KPSSIFAP-------------PQ 48
LY DL + T TT V WSS K+ L+ K +++ P P
Sbjct: 3 LYDDL-----DTIKTRTTEKVAAWSSGIKLLQSQLQLKKAAVTQPKREALRRSTQVLTPV 57
Query: 49 TILKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPNDY 108
LK +SK + NS SSP I P A+ + + V EYDP PNDY
Sbjct: 58 IDLKSKSKDEEETNS------SSPKIQPKTITASL----NVRDLDWNVANEYDPMWPNDY 107
Query: 109 EDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAM 168
E +E + K + ++ R + R+++ + + + A + E +RA
Sbjct: 108 EKVAKELQAKRLQSDDRGDRWDRKRKSRLGDDEDIIPEKTLVAMQPEEEEAEEISKRATG 167
Query: 169 SSGGVPP----RSPSPPPVN-VESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMG 223
+ PP S SPPP+ + GF+IG G GA + A ++MAK G
Sbjct: 168 VAIAPPPSLTTESSSPPPIRALPQATASAGFSIG-------GYGAS---SVAAKIMAKYG 217
Query: 224 WKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENK---------------------SE 262
+KEGQG G++EQG++ L KT +R G I++ +N S
Sbjct: 218 FKEGQGWGKKEQGMSVALQVEKTSKRGGRIIHEKDNNVMPPPGFTMQAPAGPDSPNTSSN 277
Query: 263 KKVKSVN------FNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 315
++S N P++V+ LRNMVGPG+VD+ELE EV EC KYG V +VLIFE+
Sbjct: 278 SPLRSRNEPSITEIMKTPSKVVWLRNMVGPGDVDEELEPEVKDECNTKYGEVVKVLIFEM 337
Query: 316 TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
PN P DEAVRI V+F+R E KA++DL+GRFFGGR V+A FYD E+F+ +L
Sbjct: 338 --PNVPSDEAVRILVEFKRMESAIKAVVDLNGRFFGGRQVKAGFYDVEKFNSLQL 390
>gi|260809958|ref|XP_002599771.1| hypothetical protein BRAFLDRAFT_205776 [Branchiostoma floridae]
gi|229285053|gb|EEN55783.1| hypothetical protein BRAFLDRAFT_205776 [Branchiostoma floridae]
Length = 382
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 168/321 (52%), Gaps = 63/321 (19%)
Query: 95 TVIEEYDPARPNDYEDYR---REKKKKAVDAEIRRELERRRQEGEER------------- 138
VI+EYDP PNDYE REK+ + D E R+++ R R
Sbjct: 78 NVIDEYDPLFPNDYEKVAKEFREKQARERDQERDRDVDERDSRKPSRGGGSFPHGFDSTH 137
Query: 139 --------------ERREREERENASASRLNMSGEEA-WKRRAAMSSGGV----PPRSPS 179
ER+ R A A ++ +E ++R+ S G P R+ +
Sbjct: 138 AARGPSGSSDDPPEERKPRSRYGAAIAPPPSLQDDEPPFERKPRSSKHGDEERDPERATT 197
Query: 180 PPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITT 239
PPP G TIG G+GG AA R+MAK G++EGQGLG+ EQGI+T
Sbjct: 198 PPP------GSSFAATIG---------GSGG--LAASRIMAKYGYREGQGLGKSEQGIST 240
Query: 240 PLMARKTDRRAGVIVNAS-ENKSEKKVKSVN--------FNGPPTRVLLLRNMVGPGEVD 290
L KT +R G I+ + E K K V PT+V++LRNMVGPGEVD
Sbjct: 241 ALQVEKTSKRGGKIIQGTLEPKGTIKYHLVKPELDSITEIMKNPTKVVVLRNMVGPGEVD 300
Query: 291 DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFF 350
D+LE E ECAKYG V +V+IFE+ P P DEAVRIFV+F+R E KA++DL+GR+F
Sbjct: 301 DDLEPETAEECAKYGKVNKVVIFEM--PGRPEDEAVRIFVEFDRLEAAIKAVVDLNGRYF 358
Query: 351 GGRVVRATFYDEERFSKNELA 371
GGR+V+ FY ++F +LA
Sbjct: 359 GGRLVKGAFYSLDKFRTLQLA 379
>gi|224105035|ref|XP_002333868.1| predicted protein [Populus trichocarpa]
gi|222838759|gb|EEE77110.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 107/132 (81%), Gaps = 14/132 (10%)
Query: 154 LNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMT 213
+N+SGEEAW+RRAAMS GGVP RS SPP G GF+IG S T GLG+GAGGQMT
Sbjct: 36 VNISGEEAWRRRAAMS-GGVP-RSSSPPR-------NGDGFSIGTSGTVGLGVGAGGQMT 86
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNG- 272
AAQRMM KMGWKEGQGLG+ EQGITTPLMA+KTDRRAGVIVNA SEKKVKSVNFNG
Sbjct: 87 AAQRMMTKMGWKEGQGLGKHEQGITTPLMAKKTDRRAGVIVNA----SEKKVKSVNFNGT 142
Query: 273 PPTRVLLLRNMV 284
PPTRVLLLR V
Sbjct: 143 PPTRVLLLRQQV 154
>gi|389612784|dbj|BAM19802.1| conserved hypothetical protein, partial [Papilio xuthus]
Length = 396
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 204/416 (49%), Gaps = 92/416 (22%)
Query: 5 LYGDLPPPSDEDKPTNTTTTV--WSSSAKMAPPTLR-KPSSIFAP-------------PQ 48
LY DL + T TT V WSS K+ L+ K +++ P P
Sbjct: 3 LYDDL-----DTIKTRTTEKVAGWSSGIKLLQSQLQLKKAAVTQPKREALRRSTQVLTPV 57
Query: 49 TILKPQSKPKTTQN-SLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVIEEYDPARPND 107
LK + K +++Q+ S+ P+ P P + V EYDP PND
Sbjct: 58 IDLKSKQKDESSQDDSISNNPNLQPK--------TYTPSLNVTDFDWNVANEYDPMWPND 109
Query: 108 YEDYRREKKKKAVDAEIRRELERRRQEGEERERRER---EERENASASRLNMSGEE---A 161
YE +E + K + + ++R +R+R+ R +E + + M EE
Sbjct: 110 YEKVAKEMQNKRLQLDGSDRIDRT-----DRKRKSRFGDDEDTIPEKTLIPMQPEEEEAV 164
Query: 162 WKRRAAMSSGGVPPRSP-------SPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTA 214
K + A+ + PP S SPP + + GGF+IG G GA +
Sbjct: 165 EKTKRAVGAAIAPPPSLTVEAAALSPPSPSAPTNAPAGGFSIG-------GYGAS---SV 214
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV-------------------- 254
A ++MAK G+KEGQGLG++EQG++ L KT +R G I+
Sbjct: 215 AAKIMAKYGFKEGQGLGKKEQGMSVALQVEKTSKRGGRIIHEKDGNTMPPPGFTMPPPPG 274
Query: 255 ----NASEN-----KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKY 304
NAS N KSE + + + P++V+LLRNMVGPG+VD+ELE EV EC KY
Sbjct: 275 PDSPNASSNSPQMLKSEPSITEIMKS--PSKVVLLRNMVGPGDVDEELEPEVKDECNTKY 332
Query: 305 GTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFY 360
G V +V+IFE+ PN P DEAVRIFV+F+R E KA++DL+GRFFGGR V+A FY
Sbjct: 333 GDVIKVVIFEM--PNAPNDEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFY 386
>gi|256084520|ref|XP_002578476.1| hypothetical protein [Schistosoma mansoni]
gi|353229232|emb|CCD75403.1| hypothetical protein Smp_161750 [Schistosoma mansoni]
Length = 472
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 163/325 (50%), Gaps = 62/325 (19%)
Query: 96 VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREEREN------- 148
V++EY+P PN+YE+ R K+ ERRR EE +R R +
Sbjct: 161 VMDEYNPMIPNEYEELARIKR------------ERRR--AEESALADRHHRLDPFGMNDP 206
Query: 149 -ASASRLNMSGEEAWKRRAAMSSGGVPPRSPS------PPPVNVESGGGGGGFTIGKSET 201
R S EE + ++ G P+ PP V +E G ++
Sbjct: 207 SGMCRRYEYSDEEDDEDNEYTAASGRNSSQPTKGAAIAPPSVLLEDVTVTSGSNASQNSE 266
Query: 202 SGLGLGAGGQMTA---------AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGV 252
S + G TA A +MMA+MG++EGQGLGR+ QG++T L+ KT RR G
Sbjct: 267 SSVNDDDPGVSTASSKFGINVVAAKMMARMGYREGQGLGRESQGMSTALVVEKTSRRGGK 326
Query: 253 IVN--------------ASENKSEKKVKSVN----FNGPP-----TRVLLLRNMVGPGEV 289
I++ A+ N S S N FN P + V+LLRNM GPGEV
Sbjct: 327 IIHEKDQQRQQIHANASATTNNSLPSYLSANVEETFNNLPLPENRSCVILLRNMCGPGEV 386
Query: 290 DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRF 349
DD+LE E ECAKYG V +I+E+ P P DE VRIFV+FE E TKA++DL+GRF
Sbjct: 387 DDDLEPETAEECAKYGKVVMCMIYEL--PEAPDDEVVRIFVEFESEEAATKAVLDLNGRF 444
Query: 350 FGGRVVRATFYDEERFSKNELAPLP 374
F GRVV+A FYD E+F ELA P
Sbjct: 445 FAGRVVKAGFYDAEKFRNLELADAP 469
>gi|241999926|ref|XP_002434606.1| DNA-damage-repair/toleration protein DRT111, putative [Ixodes
scapularis]
gi|215497936|gb|EEC07430.1| DNA-damage-repair/toleration protein DRT111, putative [Ixodes
scapularis]
Length = 379
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 172/313 (54%), Gaps = 49/313 (15%)
Query: 88 ALVGVTSTVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERRER---E 144
+L+G V EYDP PNDYE +E+K++ + R E +RR++GE + +ER
Sbjct: 86 SLLGGEWDVRLEYDPLWPNDYEKLMKERKERREKEDRRHEDRKRREKGERGQDKERPRPA 145
Query: 145 ERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGL 204
E E S R GG + +PPP VE G G G S GL
Sbjct: 146 EPEEDSPPRPQ--------------RGGASGAAIAPPPSLVEETGSPGRDDTG-SRHPGL 190
Query: 205 GLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA-------- 256
G+ + AQR+MA+ G+K GQGLG+ EQG++ L+ KT +R G I++
Sbjct: 191 GI-PRRSGSVAQRIMARYGYKAGQGLGKLEQGMSQALLVEKTSKRGGKIIHEKDIPKQGG 249
Query: 257 ------------------SENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVG 298
S+ ++ + + + N P++V+LL+NMVGPGEVD++LE E
Sbjct: 250 CISLLSFPAEPASLSPQPSQQQTAESITDMMRN--PSKVVLLKNMVGPGEVDEDLEPETK 307
Query: 299 SECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
EC+KYG V R LIFEI P DEAVRIF++F+R E KA++D +GR+FGGRVV+A+
Sbjct: 308 EECSKYGEVVRCLIFEI--PGVSDDEAVRIFIEFKRLESAIKAVVDTNGRYFGGRVVKAS 365
Query: 359 FYDEERFSKNELA 371
FYD ++F + ELA
Sbjct: 366 FYDHDKFKRLELA 378
>gi|303281406|ref|XP_003059995.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458650|gb|EEH55947.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 116/201 (57%), Gaps = 42/201 (20%)
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE------------------- 258
MM KMGWKEGQGLG+ +QG+TTPLMA K + GVIVNA E
Sbjct: 1 MMMKMGWKEGQGLGKSDQGMTTPLMAEKRGAKHGVIVNAPEMFFATGSDDEKAGLGGGSG 60
Query: 259 --NKSEKKVKSVNF---------------------NGPPTRVLLLRNMVGPGEVDDELED 295
+ + + + F GPP++VLLLRNM+GPGEVD++LED
Sbjct: 61 VVDATRTLLGAPKFVSSGATEGGDGDAVGASPPPARGPPSKVLLLRNMIGPGEVDEDLED 120
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
EV EC K+G V RV+IFE+TE + EAVRIFV+F + E K ++DGRFFGGR V
Sbjct: 121 EVAEECEKHGAVHRVMIFEVTESGYDPREAVRIFVEFTKPEDAAKCANEMDGRFFGGRTV 180
Query: 356 RATFYDEERFSKNELAPLPGE 376
A+ YDE F NEL P PGE
Sbjct: 181 AASHYDEGLFEANELGPQPGE 201
>gi|384493179|gb|EIE83670.1| hypothetical protein RO3G_08375 [Rhizopus delemar RA 99-880]
Length = 475
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 160/317 (50%), Gaps = 48/317 (15%)
Query: 85 PQPALVGVTSTVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERER---- 140
PQP + ++E+YDP RPNDYE Y+ E+++ + +R+ E+++ G
Sbjct: 180 PQP----IVFNMLEDYDPHRPNDYEQYKEERRELREKQKRQRDWEKKQAYGRHSRSRSRS 235
Query: 141 --------REREEREN------------ASASRLNMSGEEAWKRRAAMSSGGVPPRSPSP 180
R R+ R + ++ LN + E+A++RR +S P+
Sbjct: 236 RSPSPEVARYRDSRSHNKPSSPPPAIPAPASINLNETAEDAYQRRLRLSQQQ--PKPTET 293
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P ++ I A++++AK GW+EGQGLGR +GI
Sbjct: 294 PHSKLDDERLASAQDI------------------ARKVLAKYGWQEGQGLGRDGEGIKEA 335
Query: 241 LMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSE 300
L + +GVI+N S + K ++ +LL NMVGPGEVDD L++E E
Sbjct: 336 LQVKPIGNGSGVIINKSAQIPIEHEKKDVIKEKASKTILLTNMVGPGEVDDMLQEETAEE 395
Query: 301 CAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFY 360
C+KYG V R LIFE+ P +AVRIFV+F E +A+ DL+GRFFGGR V A++Y
Sbjct: 396 CSKYGKVERCLIFEVPRGQVPEHKAVRIFVKFSDVESAKRAIQDLNGRFFGGRSVSASYY 455
Query: 361 DEERFSKNELAPLPGEI 377
D +RF K +LAP E+
Sbjct: 456 DTKRFDKLDLAPTKDEL 472
>gi|321465609|gb|EFX76609.1| hypothetical protein DAPPUDRAFT_306107 [Daphnia pulex]
Length = 381
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 215/408 (52%), Gaps = 73/408 (17%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQ---------------- 48
LY D+ DE+K + T WSS K+ + ++ P+
Sbjct: 3 LYDDI----DENKAKSVTG--WSSGIKLLHSQMHLKKAMITQPKREGIRRAIHPVIPPFL 56
Query: 49 --TILKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQ----PALVGVTSTVIEEYDP 102
T + +++P+ T+N + P I P + ++ + P L EYDP
Sbjct: 57 TATESQIKTEPEMTKNLIHQTPQLLTTIVPKQERSSLFAELEWDPNL---------EYDP 107
Query: 103 ARPNDYEDYRREKK-KKAVDAEIRRELERRRQEGEERERREREERENASAS----RLNMS 157
P DY+ RE+K ++ ++ EI E E++R+ ++R+ + R+ +A+ S RL+
Sbjct: 108 LHPTDYDKIIRERKERRGIEMEIE-EAEKKRKPRDDRDIKTRDRSSSAAGSGFAGRLHDE 166
Query: 158 GEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQR 217
EE ++++ +SGGV + +PPP S + ++G G+GA G A +
Sbjct: 167 EEEPMVKKSS-TSGGV---AIAPPP----SLQDTSSPSHPSLSSTGSGVGALG---VAAK 215
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASEN--------------KSEK 263
+MAK G+KEGQGLGRQ+QGI L KT +R G I+N E K+E
Sbjct: 216 IMAKYGFKEGQGLGRQQQGIAAALQVEKTSKRGGRIINEKEIMPPPPPVVSPTAAPKAEL 275
Query: 264 KVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPV 322
+ + N P++V+ LRNMVGPGEVD +LE EV EC KYG V +V+IFE+ PN
Sbjct: 276 TIADIMKN--PSKVIYLRNMVGPGEVDSDLEPEVREECQTKYGDVNKVVIFEV--PNAEE 331
Query: 323 DEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+EAVRIFV+F+R E KA+IDL+GRFF GR V+A FYD ERF K EL
Sbjct: 332 EEAVRIFVEFKRMEAAIKAVIDLNGRFFAGRQVKAGFYDVERFLKMEL 379
>gi|348575588|ref|XP_003473570.1| PREDICTED: splicing factor 45 [Cavia porcellus]
Length = 386
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 199/421 (47%), Gaps = 94/421 (22%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSGDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KV----VKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ------NMSGEEAWKRRAAMSSGGVPP---------RSPSPPPVNVESGGGGGGFTIGKS 199
+ EE + R+ S +PP RSP+ P + + GG
Sbjct: 166 RKRIPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNSFLANMGG-------- 217
Query: 200 ETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NAS 257
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +A+
Sbjct: 218 -------------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDAT 264
Query: 258 ENKSEKKVKSVNFNGP-------PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRV 310
E + + + P PT+V+LLRNMVG GEVD++LE E EC KYG V +
Sbjct: 265 EKGESQDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEIETKEECEKYGKVGKC 324
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +L
Sbjct: 325 VIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDL 382
Query: 371 A 371
A
Sbjct: 383 A 383
>gi|221502499|gb|EEE28226.1| DNA repair enzyme, putative [Toxoplasma gondii VEG]
Length = 466
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 155/279 (55%), Gaps = 33/279 (11%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMS 157
+EYDP PNDY REK +K + R ELER RQ+ E +++ R+ S S L+
Sbjct: 214 DEYDPGTPNDYSAIYREKIRK----QQREELERLRQQ--ELDKQRRDRELPGSGSSLSGV 267
Query: 158 GEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQR 217
A+ + S P +P P ++ + + A R
Sbjct: 268 ---AFGDSPSTPSPPAAPPAPPVLPSYIDPA----------------------KKSFAAR 302
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRV 277
MM KMGWK G+GLG +QGIT PL+A+KT R+GVIV +E FN PPTRV
Sbjct: 303 MMEKMGWKHGEGLGVNKQGITAPLVAKKTAMRSGVIVQGAEVVQAAAQVRAQFNRPPTRV 362
Query: 278 LLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQ 337
LLL NMVG GEVD++L++E E AK+G + +V I E E P DEAVRIF ++ER E+
Sbjct: 363 LLLLNMVGRGEVDEDLKEETEEEAAKFGNLLQVKIVEAAEA--PDDEAVRIFCEYERKEE 420
Query: 338 TTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
T+A + ++GR FGGR V+ FY EER+ K++L P P E
Sbjct: 421 ATRAFMTMNGRVFGGRTVKGRFYCEERWGKDDLMPNPEE 459
>gi|391345056|ref|XP_003746809.1| PREDICTED: splicing factor 45-like [Metaseiulus occidentalis]
Length = 354
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 184/377 (48%), Gaps = 71/377 (18%)
Query: 26 WSSSAKMAPPTL----------RKPSSIFAPPQTILKPQSKPKTTQNSLPTRPHSSPAIA 75
WSS K+ + RK ++ AP I +SK + + +P P P
Sbjct: 16 WSSGIKLLQSHVQLKKATNHVQRKTTTAIAP--VIDLNRSKDRVNADDMPAIPLYVPKGG 73
Query: 76 PSPDDAAALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEG 135
S L+G + +EYDP PN+Y+ R +++ R+E
Sbjct: 74 AS-----------LLGGEWFLKDEYDPLYPNEYD----------------RLVKQFRREQ 106
Query: 136 EERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGG-- 193
+ ++ +R+ + + S G KR +AM + PP S + V+ G
Sbjct: 107 QNEKKSDRKAKSSDSP------GSNGSKRHSAMIA---PPPSLAGDIVSKTEDDDYAGDD 157
Query: 194 ------FTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTD 247
F + TS + G AA ++MAKMG+K GQGLG+ EQGI++ L KT
Sbjct: 158 SPPRPDFLMPSISTSAVASNMGCSSVAA-KIMAKMGFKAGQGLGKSEQGISSALTVEKTS 216
Query: 248 RRAGVIVNASE--------------NKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDEL 293
R G IV A+ N+ ++ PT+V+LLRNMVGPGEVD++L
Sbjct: 217 HRGGKIVEANTSTFLQPGPAAAAVPNRQGEEQSITEILRAPTKVVLLRNMVGPGEVDEDL 276
Query: 294 EDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGR 353
E E EC +YG V + +I+E+ P +EAVRIFV+F+ KA++DL+GRFFGGR
Sbjct: 277 EPETKEECGRYGEVVKCVIYELPGPEINPEEAVRIFVEFKNIAHAIKAVVDLNGRFFGGR 336
Query: 354 VVRATFYDEERFSKNEL 370
VVRA FYD+E+F++ EL
Sbjct: 337 VVRAGFYDQEKFNRLEL 353
>gi|237843011|ref|XP_002370803.1| DNA repair enzyme, putative [Toxoplasma gondii ME49]
gi|211968467|gb|EEB03663.1| DNA repair enzyme, putative [Toxoplasma gondii ME49]
gi|221482119|gb|EEE20480.1| DNA repair enzyme, putative [Toxoplasma gondii GT1]
Length = 466
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 155/279 (55%), Gaps = 33/279 (11%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMS 157
+EYDP PNDY REK +K + R ELER RQ+ E +++ R+ S S L+
Sbjct: 214 DEYDPGTPNDYSAIYREKIRK----QQREELERLRQQ--ELDKQRRDRELPGSGSSLSGV 267
Query: 158 GEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQR 217
A+ + S P +P P ++ + + A R
Sbjct: 268 ---AFGDSPSTPSPPAAPPAPPVLPSYIDPA----------------------KKSFAAR 302
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRV 277
MM KMGWK G+GLG +QGIT PL+A+KT R+GVIV +E FN PPTRV
Sbjct: 303 MMEKMGWKHGEGLGVNKQGITAPLVAKKTAMRSGVIVQGAEVVQAAAQVRAQFNRPPTRV 362
Query: 278 LLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQ 337
LLL NMVG GEVD++L++E E AK+G + +V I E E P DEAVRIF ++ER E+
Sbjct: 363 LLLLNMVGRGEVDEDLKEETEEEAAKFGNLLQVKIVEAAEA--PDDEAVRIFCEYERKEE 420
Query: 338 TTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
T+A + ++GR FGGR V+ FY EER+ K++L P P E
Sbjct: 421 ATRAFMTMNGRVFGGRTVKGRFYCEERWGKDDLMPNPEE 459
>gi|21666567|gb|AAM73762.1| DNA repair enzyme [Toxoplasma gondii]
Length = 466
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 155/279 (55%), Gaps = 33/279 (11%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMS 157
+EYDP PNDY REK +K + R ELER RQ+ E +++ R+ S S L+
Sbjct: 214 DEYDPGTPNDYSAIYREKIRK----QQREELERLRQQ--ELDKQRRDRELPGSGSSLSGV 267
Query: 158 GEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQR 217
A+ + S P +P P ++ + + A R
Sbjct: 268 ---AFGDSPSTPSPPAAPPAPPVLPSYIDPA----------------------KKSFAAR 302
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRV 277
MM KMGWK G+GLG +QGIT PL+A+KT R+GVIV +E FN PPTRV
Sbjct: 303 MMEKMGWKHGEGLGVNKQGITAPLVAKKTAMRSGVIVQGAEVVQAAAQVRAQFNRPPTRV 362
Query: 278 LLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQ 337
LLL NMVG GEVD++L++E E AK+G + +V I E E P DEAVRIF ++ER E+
Sbjct: 363 LLLLNMVGRGEVDEDLKEETEEEAAKFGNLLQVKIVEAAEA--PDDEAVRIFCEYERKEE 420
Query: 338 TTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
T+A + ++GR FGGR V+ FY EER+ K++L P P E
Sbjct: 421 ATRAFMTMNGRVFGGRTVKGRFYCEERWGKDDLMPNPEE 459
>gi|401410682|ref|XP_003884789.1| putative DNA repair enzyme [Neospora caninum Liverpool]
gi|325119207|emb|CBZ54761.1| putative DNA repair enzyme [Neospora caninum Liverpool]
Length = 474
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 154/283 (54%), Gaps = 40/283 (14%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERE----NASASR 153
+EYDP PNDY REK +K + R ELER RQ+ E++ R +RE NA +S
Sbjct: 221 DEYDPGNPNDYSAVYREKIRK----QQREELERLRQQELEKQ---RRDREPGLPNAGSSL 273
Query: 154 LNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMT 213
++ ++ + + P P + +
Sbjct: 274 SGVAFGDSPAAPSPPPAPPAPALPSYIDPA---------------------------KKS 306
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGP 273
A RMM KMGWK G+GLG +QGIT PL+A+KT R+GVIV +E FN P
Sbjct: 307 FAARMMEKMGWKHGEGLGVNKQGITAPLVAKKTAMRSGVIVQGAEVVQAAAQARAQFNRP 366
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PTRVLLL NMVG GEVD++L++E E AK+G + +V I E P P DEAVRIF ++E
Sbjct: 367 PTRVLLLLNMVGRGEVDEDLKEETEEEAAKFGNLLQVKIVEA--PEAPDDEAVRIFCEYE 424
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
R E+ T+A + ++GR FGGR V+ FY EER+ K++L P P E
Sbjct: 425 RKEEATRAFMTMNGRVFGGRTVKGRFYCEERWGKDDLMPNPEE 467
>gi|291236494|ref|XP_002738177.1| PREDICTED: RNA binding motif protein 17-like [Saccoglossus
kowalevskii]
Length = 519
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 121/193 (62%), Gaps = 29/193 (15%)
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE----- 258
+GLGAG + A ++MAK G+KEGQGLG+ EQG+++ L KT +R G I+ +
Sbjct: 331 IGLGAG---SVAAKIMAKYGFKEGQGLGKSEQGMSSALQVEKTSKRGGKIIAGDKPVMPV 387
Query: 259 ---NKSEKKVKSVNFNGP----------------PTRVLLLRNMVGPGEVDDELEDEVGS 299
+S + GP P++V+LLRNMVGPGEVDD+LE E
Sbjct: 388 EPLPPPPPPPQSADQMGPPKSQIAATALTEAMRNPSKVVLLRNMVGPGEVDDDLEPETAE 447
Query: 300 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
EC KYG VTRVLIFEI P DEAVRIFV+FER E KA++DL+GR+FGGR V+A F
Sbjct: 448 ECTKYGKVTRVLIFEI--PGGAPDEAVRIFVEFERLESAIKAVVDLNGRYFGGRTVKAGF 505
Query: 360 YDEERFSKNELAP 372
+D +RF + +LAP
Sbjct: 506 FDPDRFKRYDLAP 518
>gi|126340342|ref|XP_001362735.1| PREDICTED: splicing factor 45 isoform 2 [Monodelphis domestica]
gi|395538974|ref|XP_003771449.1| PREDICTED: splicing factor 45 [Sarcophilus harrisii]
Length = 401
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 201/436 (46%), Gaps = 109/436 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGSSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPREFPFEEESRPRSQSSKAAIPPPVYDEQERPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
L KT +R G I+ +A+E + KK S PT+V+LLRNMVG GEVD++LE
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEG 324
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV
Sbjct: 325 ETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVV 382
Query: 356 RATFYDEERFSKNELA 371
+A FY+ ++F +LA
Sbjct: 383 KACFYNLDKFRVLDLA 398
>gi|149743592|ref|XP_001500189.1| PREDICTED: splicing factor 45 isoform 1 [Equus caballus]
Length = 401
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 203/421 (48%), Gaps = 79/421 (18%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P A S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRAGSSDDRQIVDTPPHAAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASR-------LNMSGEEAW 162
K+ + R+ R++E EERE+R ++ E + SR + E
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 163 KRRAAMSSGGVPP----------------------RSPS-----PPPVNVESGGGGGGFT 195
++R+ + PP RS S PPPV E
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTG 225
Query: 196 IGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV- 254
G S + +G T A ++M K G++EGQGLG+ EQG++T L KT +R G I+
Sbjct: 226 PGNSFLANMG------GTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIV 279
Query: 255 -NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRV 310
+A+E + KK S PT+V+LLRNMVG GEVD++LE E EC KYG V +
Sbjct: 280 GDATEKDAAKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKC 339
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +L
Sbjct: 340 VIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDL 397
Query: 371 A 371
A
Sbjct: 398 A 398
>gi|148666907|gb|EDK99323.1| mCG1036453 [Mus musculus]
Length = 358
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 177/347 (51%), Gaps = 68/347 (19%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P A L P G ++ + +EYDP NDYE + ++++ + +RELER++
Sbjct: 24 PHVTAGLKDPVPSGFSAGEVLIPLADEYDPMFSNDYEKVVKHQRER----QRQRELERQK 79
Query: 133 QEGEERERREREERENASASRL---------NMSGEEAWKRRAAMSSGGVPPRS------ 177
E EERE+R ++ E ASRL E +R+ +M + PR
Sbjct: 80 -EIEEREKRRKDRHE---ASRLLRQPDPDSDEDKDYERERRKRSMGGAAIAPRKSLVEKD 135
Query: 178 ------------------------PSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMT 213
PSPPP E T G S + +G T
Sbjct: 136 KELPWDFPYEEDSRPRSQSSKAAIPSPPPPMYEEPDRPRSPT-GPSNSFLANMGG----T 190
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS---ENKSEKKVKSVNF 270
A ++M K G++EGQGLG+ EQG++T L KT +R G I+ + K++ K +
Sbjct: 191 VAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDVKEKGKAQDASKKSDS 250
Query: 271 N------GPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
N PT+V+LLRNMVG GEVD +LE E EC KYG V + +IFEI P P DE
Sbjct: 251 NPLTEILKCPTKVVLLRNMVGAGEVDKDLEVETKEECEKYGKVGKCVIFEI--PGAPDDE 308
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
AVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 309 AVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 355
>gi|395827373|ref|XP_003786879.1| PREDICTED: splicing factor 45 [Otolemur garnettii]
Length = 401
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 201/436 (46%), Gaps = 109/436 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRHREERQRQRELERQKEIEEREKRRKDRHETSGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
L KT +R G I+ +A+E + KK S PT+V+LLRNMVG GEVD++LE
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKDATKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEV 324
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV
Sbjct: 325 ETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVV 382
Query: 356 RATFYDEERFSKNELA 371
+A FY+ ++F +LA
Sbjct: 383 KACFYNLDKFRVLDLA 398
>gi|344277716|ref|XP_003410644.1| PREDICTED: splicing factor 45 [Loxodonta africana]
Length = 401
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 201/436 (46%), Gaps = 109/436 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYDEQDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
L KT +R G I+ +A+E + KK S PT+V+LLRNMVG GEVD++LE
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEV 324
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV
Sbjct: 325 ETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVV 382
Query: 356 RATFYDEERFSKNELA 371
+A FY+ ++F +LA
Sbjct: 383 KACFYNLDKFRVLDLA 398
>gi|296206115|ref|XP_002750072.1| PREDICTED: splicing factor 45 [Callithrix jacchus]
Length = 401
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 201/436 (46%), Gaps = 109/436 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPMYEEQDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
L KT +R G I+ +A+E + KK S PT+V+LLRNMVG GEVD++LE
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEV 324
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV
Sbjct: 325 ETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVV 382
Query: 356 RATFYDEERFSKNELA 371
+A FY+ ++F +LA
Sbjct: 383 KACFYNLDKFRVLDLA 398
>gi|355782616|gb|EHH64537.1| 45 kDa-splicing factor [Macaca fascicularis]
Length = 401
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 201/436 (46%), Gaps = 109/436 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRP----------HSSPAIAPSPDDAAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P P + P AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRPIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + +R
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
L KT +R G I+ +A+E + KK S PT+V+LLRNMVG GEVD++LE
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEV 324
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV
Sbjct: 325 ETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVV 382
Query: 356 RATFYDEERFSKNELA 371
+A FY+ ++F +LA
Sbjct: 383 KACFYNLDKFRVLDLA 398
>gi|73949102|ref|XP_849339.1| PREDICTED: splicing factor 45 isoform 2 [Canis lupus familiaris]
gi|301769963|ref|XP_002920393.1| PREDICTED: splicing factor 45-like [Ailuropoda melanoleuca]
gi|410963149|ref|XP_003988128.1| PREDICTED: splicing factor 45 [Felis catus]
gi|281347515|gb|EFB23099.1| hypothetical protein PANDA_009135 [Ailuropoda melanoleuca]
Length = 401
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 202/421 (47%), Gaps = 79/421 (18%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASR-------LNMSGEEAW 162
K+ + R+ R++E EERE+R ++ E + SR + E
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 163 KRRAAMSSGGVPP----------------------RSPS-----PPPVNVESGGGGGGFT 195
++R+ + PP RS S PPPV E
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTG 225
Query: 196 IGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV- 254
G S + +G T A ++M K G++EGQGLG+ EQG++T L KT +R G I+
Sbjct: 226 PGNSFLANMG------GTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIV 279
Query: 255 -NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRV 310
+A+E + KK S PT+V+LLRNMVG GEVD++LE E EC KYG V +
Sbjct: 280 GDATEKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEAETKEECEKYGKVGKC 339
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +L
Sbjct: 340 VIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDL 397
Query: 371 A 371
A
Sbjct: 398 A 398
>gi|149731824|ref|XP_001494792.1| PREDICTED: splicing factor 45-like [Equus caballus]
Length = 401
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 201/413 (48%), Gaps = 63/413 (15%)
Query: 5 LYGDLPPPSDEDKPT--NTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQN 62
LY DL + + K + T+ S ++ L + S T+L P K +
Sbjct: 3 LYDDLGVETSDSKTEGWSKNFTLLQSQLQVKRAALTQAKSQRTKQSTVLAPVIDLKRGGS 62
Query: 63 SLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKK 117
S + +P P AA L P G ++ + +EYDP PNDYE K
Sbjct: 63 SDDRQIVDTP-----PHVAAGLKDPVPSGFSAGEVLIPLADEYDPRFPNDYEKV----VK 113
Query: 118 KAVDAEIRRELERRRQEGEERERREREERENASASRL---NMSGEEAWKR-RAAMSSGGV 173
+ + R+ R++E EERE+R ++ E + SR + +E ++R R S GG
Sbjct: 114 RQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRTDPDSDEDEDYERERRKRSMGGA 173
Query: 174 P-------------------------PRSPS-----PPPVNVESGGGGGGFTIGKSETSG 203
PRS S PPPV E G S +
Sbjct: 174 AITPPTSLVEKDKELPRDFPHEEDSRPRSQSSKAGIPPPVYEEQDKPRSPTGPGNSFLAN 233
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKS 261
+G T A ++M K G++EGQGLG+ EQG++ L KT +R G I+ +A+E +
Sbjct: 234 MG------GTVAHKIMQKYGFREGQGLGKHEQGLSMALSVEKTSKRGGKIIVGDATEKDA 287
Query: 262 EKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEP 318
KK S PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI
Sbjct: 288 AKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIL-- 345
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 346 GAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 398
>gi|21666569|gb|AAM73763.1|AF402311_1 DNA repair enzyme [Toxoplasma gondii]
Length = 466
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 154/279 (55%), Gaps = 33/279 (11%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMS 157
+EYDP PNDY REK +K + R ELER RQ+ E +++ R+ S S L+
Sbjct: 214 DEYDPGTPNDYSAIYREKIRK----QQREELERLRQQ--ELDKQRRDRELPGSGSSLSGV 267
Query: 158 GEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQR 217
A+ + S P +P P ++ + + A R
Sbjct: 268 ---AFGDSPSTPSPPAAPPAPPVLPSYIDPA----------------------KKSFAAR 302
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRV 277
MM KMGWK G+GLG +QGIT PL+A+KT +GVIV +E FN PPTRV
Sbjct: 303 MMEKMGWKHGEGLGVNKQGITAPLVAKKTAMSSGVIVQGAEVVQAAAQVWAQFNRPPTRV 362
Query: 278 LLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQ 337
LLL NMVG GEVD++L++E E AK+G + +V I E E P DEAVRIF ++ER E+
Sbjct: 363 LLLLNMVGRGEVDEDLKEETEEEAAKFGNLLQVKIVEAAEA--PDDEAVRIFCEYERKEE 420
Query: 338 TTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
T+A + ++GR FGGR V+ FY EER+ K++L P P E
Sbjct: 421 ATRAFMTMNGRVFGGRTVKGRFYCEERWGKDDLMPNPEE 459
>gi|14249678|ref|NP_116294.1| splicing factor 45 [Homo sapiens]
gi|224549005|ref|NP_001139019.1| splicing factor 45 [Homo sapiens]
gi|383873015|ref|NP_001244661.1| splicing factor 45 [Macaca mulatta]
gi|114629220|ref|XP_001147496.1| PREDICTED: splicing factor 45 isoform 5 [Pan troglodytes]
gi|114629223|ref|XP_001147721.1| PREDICTED: splicing factor 45 isoform 7 [Pan troglodytes]
gi|297685979|ref|XP_002820545.1| PREDICTED: splicing factor 45 isoform 1 [Pongo abelii]
gi|297685981|ref|XP_002820546.1| PREDICTED: splicing factor 45 isoform 2 [Pongo abelii]
gi|332217040|ref|XP_003257661.1| PREDICTED: splicing factor 45 [Nomascus leucogenys]
gi|397515197|ref|XP_003827843.1| PREDICTED: splicing factor 45 [Pan paniscus]
gi|402879580|ref|XP_003903412.1| PREDICTED: splicing factor 45 isoform 1 [Papio anubis]
gi|402879582|ref|XP_003903413.1| PREDICTED: splicing factor 45 isoform 2 [Papio anubis]
gi|34925383|sp|Q96I25.1|SPF45_HUMAN RecName: Full=Splicing factor 45; AltName: Full=45 kDa-splicing
factor; AltName: Full=RNA-binding motif protein 17
gi|14043850|gb|AAH07871.1| RNA binding motif protein 17 [Homo sapiens]
gi|25058249|gb|AAH39322.1| RBM17 protein [Homo sapiens]
gi|33328180|gb|AAQ09533.1| unknown [Homo sapiens]
gi|119606811|gb|EAW86405.1| RNA binding motif protein 17, isoform CRA_a [Homo sapiens]
gi|119606816|gb|EAW86410.1| RNA binding motif protein 17, isoform CRA_a [Homo sapiens]
gi|189067475|dbj|BAG37457.1| unnamed protein product [Homo sapiens]
gi|261861104|dbj|BAI47074.1| RNA binding motif protein 17 [synthetic construct]
gi|312152378|gb|ADQ32701.1| RNA binding motif protein 17 [synthetic construct]
gi|355562276|gb|EHH18870.1| 45 kDa-splicing factor [Macaca mulatta]
gi|380784085|gb|AFE63918.1| splicing factor 45 [Macaca mulatta]
gi|383414113|gb|AFH30270.1| splicing factor 45 [Macaca mulatta]
gi|410227696|gb|JAA11067.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410251468|gb|JAA13701.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410303376|gb|JAA30288.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410336885|gb|JAA37389.1| RNA binding motif protein 17 [Pan troglodytes]
Length = 401
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 201/436 (46%), Gaps = 109/436 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + +R
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
L KT +R G I+ +A+E + KK S PT+V+LLRNMVG GEVD++LE
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEV 324
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV
Sbjct: 325 ETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVV 382
Query: 356 RATFYDEERFSKNELA 371
+A FY+ ++F +LA
Sbjct: 383 KACFYNLDKFRVLDLA 398
>gi|224114017|ref|XP_002332453.1| predicted protein [Populus trichocarpa]
gi|222832524|gb|EEE71001.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/132 (72%), Positives = 103/132 (78%), Gaps = 14/132 (10%)
Query: 154 LNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMT 213
+N+SGEE W+RRA MS GGVP RS SPP G GF+I S T GLG+GAGGQMT
Sbjct: 32 VNISGEEVWRRRATMS-GGVP-RSCSPPR-------NGDGFSIRTSRTVGLGVGAGGQMT 82
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNG- 272
AAQRMMAKMGWKEGQGLG+ EQGITTPLM +KTDRRAGVIVNA EKKVKSVNFNG
Sbjct: 83 AAQRMMAKMGWKEGQGLGKHEQGITTPLMVKKTDRRAGVIVNA----GEKKVKSVNFNGT 138
Query: 273 PPTRVLLLRNMV 284
PPTRVLLLR V
Sbjct: 139 PPTRVLLLRQQV 150
>gi|155371897|ref|NP_001094553.1| splicing factor 45 [Bos taurus]
gi|426240678|ref|XP_004014221.1| PREDICTED: splicing factor 45 [Ovis aries]
gi|154426050|gb|AAI51378.1| RBM17 protein [Bos taurus]
gi|296481516|tpg|DAA23631.1| TPA: RNA binding motif protein 17 [Bos taurus]
gi|440906277|gb|ELR56559.1| Splicing factor 45 [Bos grunniens mutus]
Length = 401
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 175/338 (51%), Gaps = 56/338 (16%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 73 PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 128
Query: 133 QEGEERERREREERENASASR-------LNMSGEEAWKRRAAMSSGGVPP---------- 175
+E EERE+R ++ E + SR + E ++R+ + PP
Sbjct: 129 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEL 188
Query: 176 ------------RSPS-----PPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
RS S PPPV E G S + +G T A ++
Sbjct: 189 PRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPGNSFLANMG------GTVAHKI 242
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGP 273
M K G++EGQGLG+ EQG++T L KT +R G I+ +A+E + KK S
Sbjct: 243 MQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDAAKKSDSNPLTEILKC 302
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P P DEAVRIF++FE
Sbjct: 303 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFE 360
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
R E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 361 RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 398
>gi|350589637|ref|XP_003130870.3| PREDICTED: splicing factor 45 [Sus scrofa]
Length = 401
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 175/338 (51%), Gaps = 56/338 (16%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 73 PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 128
Query: 133 QEGEERERREREERENASASR-------LNMSGEEAWKRRAAMSSGGVPP---------- 175
+E EERE+R ++ E + SR + E ++R+ + PP
Sbjct: 129 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEL 188
Query: 176 ------------RSPS-----PPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
RS S PPPV E G S + +G T A ++
Sbjct: 189 PRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPGNSFLANMG------GTVAHKI 242
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGP 273
M K G++EGQGLG+ EQG++T L KT +R G I+ +A+E + KK S
Sbjct: 243 MQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDAAKKSDSNPLTEILKC 302
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P P DEAVRIF++FE
Sbjct: 303 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFE 360
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
R E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 361 RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 398
>gi|403296380|ref|XP_003939089.1| PREDICTED: splicing factor 45 [Saimiri boliviensis boliviensis]
Length = 401
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 200/436 (45%), Gaps = 109/436 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPMYEEQDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
L KT +R G I+ +A+E + KK S PT+V+LLRNMVG GEVD++LE
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEV 324
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV
Sbjct: 325 ETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVV 382
Query: 356 RATFYDEERFSKNELA 371
+A FY ++F +LA
Sbjct: 383 KACFYILDKFRVLDLA 398
>gi|224092741|ref|XP_002189506.1| PREDICTED: splicing factor 45 [Taeniopygia guttata]
Length = 401
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 174/353 (49%), Gaps = 86/353 (24%)
Query: 78 PDDAAALPQPALVGVTST-----VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 73 PHVAAGLKDPVPSGFSAGDVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 128
Query: 133 QEGEERERREREERENASASRL------------------NMSG---------------- 158
+E EERE+R ++ E + SR +M G
Sbjct: 129 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEP 188
Query: 159 ------EEAWKRRAAMSSGGVPP---------RSPSPPPVNVESGGGGGGFTIGKSETSG 203
EE + RA S +PP RSP+ P + + GG
Sbjct: 189 VASFPYEEESRPRAPSSKAAIPPPVYDEPERPRSPTGPSNSFLANMGG------------ 236
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKS 261
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ ++E ++
Sbjct: 237 ---------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGESTEKET 287
Query: 262 EKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEP 318
KK S PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P
Sbjct: 288 GKKADSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--P 345
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 346 GAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 398
>gi|14290573|gb|AAH09064.1| RBM17 protein, partial [Homo sapiens]
Length = 369
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 174/353 (49%), Gaps = 86/353 (24%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 41 PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKV----VKRQREERQRQRELERQ 96
Query: 133 QEGEERERREREERENASASRL------------------NMSG---------------- 158
+E EERE+R ++ E + +R +M G
Sbjct: 97 KEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEL 156
Query: 159 ------EEAWKRRAAMSSGGVPP---------RSPSPPPVNVESGGGGGGFTIGKSETSG 203
EE + R+ S +PP RSP+ P + + GG
Sbjct: 157 PRDFPYEEDSRPRSQSSKAAIPPPVHEEQDRPRSPTGPSNSFLANMGG------------ 204
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKS 261
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +A+E +
Sbjct: 205 ---------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDA 255
Query: 262 EKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEP 318
KK S PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P
Sbjct: 256 SKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--P 313
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 314 GAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 366
>gi|417400279|gb|JAA47094.1| Putative mrna splicing factor [Desmodus rotundus]
Length = 401
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 200/434 (46%), Gaps = 105/434 (24%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP-------RSPSPPP 182
+M G EE + R+ S +PP R SPP
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPREFPYEEDSRPRSQSSKAAIPPPMYEEQDRPRSPP- 224
Query: 183 VNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLM 242
G G F GG T A ++M K G++EGQGLG+ EQG++T L
Sbjct: 225 ------GPGNSFLAN----------MGG--TVAHKIMQKYGFREGQGLGKHEQGLSTALS 266
Query: 243 ARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEV 297
KT +R G I+ A+E + KK S PT+V+LLRNMVG GEVD++LE E
Sbjct: 267 VEKTSKRGGKIIVGEATEKDAAKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVET 326
Query: 298 GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV+A
Sbjct: 327 KEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKA 384
Query: 358 TFYDEERFSKNELA 371
FY+ ++F +LA
Sbjct: 385 CFYNLDKFRVLDLA 398
>gi|340372917|ref|XP_003384990.1| PREDICTED: splicing factor 45-like [Amphimedon queenslandica]
Length = 425
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 110/166 (66%), Gaps = 8/166 (4%)
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSE------KKVKS 267
A +M K GW+EGQGLG++ QGI+T L KT + G IVN + + + K VKS
Sbjct: 260 VASNIMTKYGWQEGQGLGKESQGISTALSVEKTSFKGGKIVNVAAEREQVKEEERKMVKS 319
Query: 268 VN-FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
+ PT+V+LL NMVG GEVD+EL+ EV EC KYG VT LI+EI E DEAV
Sbjct: 320 LTEIVKNPTKVILLENMVGAGEVDNELQPEVIEECTKYGEVTNCLIYEIPE-GASDDEAV 378
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
RIFV+F + + KA+IDL+GRFFGGR +RA FY EERFS +LAP
Sbjct: 379 RIFVEFGKKDSAIKAVIDLNGRFFGGRTIRAGFYSEERFSNFDLAP 424
>gi|431917634|gb|ELK16899.1| Splicing factor 45 [Pteropus alecto]
Length = 401
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 199/436 (45%), Gaps = 109/436 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQVVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S VPP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPREFPYEEDSRPRSQSSKAAVPPPVYEEQDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PGNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
L KT +R G I+ +E + KK S PT+V+LLRNMVG GEVD++LE
Sbjct: 265 LSVEKTSKRGGKIIVGEVTEKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEV 324
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGRVV
Sbjct: 325 ETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVV 382
Query: 356 RATFYDEERFSKNELA 371
+A FY+ ++F +LA
Sbjct: 383 KACFYNLDKFRVLDLA 398
>gi|449266291|gb|EMC77359.1| Splicing factor 45 [Columba livia]
Length = 401
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 174/353 (49%), Gaps = 86/353 (24%)
Query: 78 PDDAAALPQPALVGVTST-----VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P A+ L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 73 PHVASGLKDPVPSGFSAGDVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 128
Query: 133 QEGEERERREREERENASASRL------------------NMSG---------------- 158
+E EERE+R ++ E + SR +M G
Sbjct: 129 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEP 188
Query: 159 ------EEAWKRRAAMSSGGVPP---------RSPSPPPVNVESGGGGGGFTIGKSETSG 203
EE + RA S +PP RSP+ P + + GG
Sbjct: 189 VASFPYEEESRPRAPSSKAAIPPPVYDEPERPRSPTGPSNSFLANMGG------------ 236
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKS 261
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ ++E ++
Sbjct: 237 ---------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGESTEKET 287
Query: 262 EKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEP 318
KK S PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P
Sbjct: 288 GKKADSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--P 345
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 346 GAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 398
>gi|326911058|ref|XP_003201879.1| PREDICTED: splicing factor 45-like [Meleagris gallopavo]
Length = 402
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 170/354 (48%), Gaps = 87/354 (24%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 73 PHVAAGLKDPVPSGFSAGDVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 128
Query: 133 QEGEERERREREERENASASRL------------------NMSG---------------- 158
+E EERE+R ++ E + SR +M G
Sbjct: 129 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEP 188
Query: 159 ------EEAWKRRAAMSSGGVPP---------RSPSPPPVNVESGGGGGGFTIGKSETSG 203
E+ + RA S +PP RSP+ P + + GG
Sbjct: 189 VASFPYEDESRPRAPSSKAAIPPPVYDEPDRPRSPTGPSNSFLANMGG------------ 236
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEK 263
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +
Sbjct: 237 ---------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKAD 287
Query: 264 KVKSVNFN------GPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITE 317
K + N PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI
Sbjct: 288 ATKKADSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI-- 345
Query: 318 PNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
P P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 346 PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 399
>gi|50729326|ref|XP_416473.1| PREDICTED: splicing factor 45 [Gallus gallus]
Length = 402
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 170/354 (48%), Gaps = 87/354 (24%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 73 PHVAAGLKDPVPSGFSAGDVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 128
Query: 133 QEGEERERREREERENASASRL------------------NMSG---------------- 158
+E EERE+R ++ E + SR +M G
Sbjct: 129 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEP 188
Query: 159 ------EEAWKRRAAMSSGGVPP---------RSPSPPPVNVESGGGGGGFTIGKSETSG 203
E+ + RA S +PP RSP+ P + + GG
Sbjct: 189 VASFPYEDESRPRAPSSKAAIPPPVYDEPDRPRSPTGPSNSFLANMGG------------ 236
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEK 263
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +
Sbjct: 237 ---------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKAD 287
Query: 264 KVKSVNFN------GPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITE 317
K + N PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI
Sbjct: 288 ATKKADSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI-- 345
Query: 318 PNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
P P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 346 PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 399
>gi|242015516|ref|XP_002428399.1| Splicing factor, putative [Pediculus humanus corporis]
gi|212513011|gb|EEB15661.1| Splicing factor, putative [Pediculus humanus corporis]
Length = 402
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 172/315 (54%), Gaps = 59/315 (18%)
Query: 95 TVIEEYDPARPNDYE----DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENAS 150
++ EYDP PNDYE D R + K+ E++ +RR+ + +++R+ + S
Sbjct: 106 NIVNEYDPMWPNDYEKVVKDLREIRDKEREKEELQELEKRRKARDDRNGKKDRDIKSGLS 165
Query: 151 ASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGL------ 204
R N +E +R + GGV + +PPP ES KSE S
Sbjct: 166 GRR-NSDDDEEEERDRSNRVGGV---AIAPPPSLQES----------KSEISTTSPKVGH 211
Query: 205 -GLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVN-------- 255
+ G AA ++MAK G+KEGQGLG++EQG++ L KT +R G I++
Sbjct: 212 PNISFAGSAVAA-KIMAKYGFKEGQGLGKKEQGMSLALQVEKTSKRGGRIIHEKDIMMPP 270
Query: 256 --------------ASEN----KSEKKVKSV-NFNGPPTRVLLLRNMVGPGEVDDELEDE 296
AS N K+E + + F P++V+LLRNMVGPGEVDD+LE E
Sbjct: 271 PAPNTPPMRVDSPPASNNFTLSKTEPSITEIMKF---PSKVVLLRNMVGPGEVDDDLEPE 327
Query: 297 VGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
V EC KYG V +VLIFE+ P+ P DEA+RIFV+F+R E KA++DL+GRFFGGR V
Sbjct: 328 VKDECNTKYGEVIKVLIFEM--PDAPQDEAIRIFVEFKRIESAIKAVVDLNGRFFGGRQV 385
Query: 356 RATFYDEERFSKNEL 370
+A FY E+F+ EL
Sbjct: 386 KAGFYVWEKFNNLEL 400
>gi|351708186|gb|EHB11105.1| Splicing factor 45 [Heterocephalus glaber]
Length = 405
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 201/440 (45%), Gaps = 113/440 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSADDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKSVNFNGP-------PTRVLLLRNMVGPGEVDD 291
L KT +R G I+ +A+E + + + P PT+V+LLRNMVG GEVD+
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKGESQDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDE 324
Query: 292 ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFG 351
+LE E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FG
Sbjct: 325 DLEIETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFG 382
Query: 352 GRVVRATFYDEERFSKNELA 371
GRVV+A FY+ ++F +LA
Sbjct: 383 GRVVKACFYNLDKFRVLDLA 402
>gi|296473885|tpg|DAA16000.1| TPA: RNA binding motif protein 17-like [Bos taurus]
Length = 401
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 203/433 (46%), Gaps = 103/433 (23%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTL--RKPSSIFAPPQ-----TILKPQSKP 57
LY DL + +++ T WS + K+ L +K + A Q T+L P
Sbjct: 3 LYNDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDL 57
Query: 58 KTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYR 112
K +S + +P P AA L P G ++ + +EYDP PNDYE
Sbjct: 58 KRGGSSDERQIVDTP-----PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVV 112
Query: 113 REKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL------------------ 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 113 ----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKR 168
Query: 155 NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSPPPV 183
+M G EE + R+ S +PP RSP+ P
Sbjct: 169 SMGGAAIAPPTSLVEKDKELPRDFLDEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPGN 228
Query: 184 NVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA 243
+ + GG T A ++M K G++EGQGLG+ EQG++T L
Sbjct: 229 SFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTALSM 267
Query: 244 RKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEVG 298
KT +R G I+ +A+E + KK S PT+V+LLRNMVG GEVD++L+ E
Sbjct: 268 EKTSKRGGKIIVGDATEKDAAKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLKVETK 327
Query: 299 SECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
EC KYG V + +IFEI P P DEAVRIF++FER E K ++DL+GR+FGGRVV+A
Sbjct: 328 EECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKVVVDLNGRYFGGRVVKAC 385
Query: 359 FYDEERFSKNELA 371
FY+ ++F +LA
Sbjct: 386 FYNLDKFRVLDLA 398
>gi|61556823|ref|NP_001013076.1| splicing factor 45 [Rattus norvegicus]
gi|354465034|ref|XP_003494985.1| PREDICTED: splicing factor 45 [Cricetulus griseus]
gi|50927039|gb|AAH79248.1| RNA binding motif protein 17 [Rattus norvegicus]
gi|344238978|gb|EGV95081.1| Splicing factor 45 [Cricetulus griseus]
Length = 405
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 201/440 (45%), Gaps = 113/440 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKSVNFNGP-------PTRVLLLRNMVGPGEVDD 291
L KT +R G I+ +A+E + + + P PT+V+LLRNMVG GEVD+
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKGESQDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDE 324
Query: 292 ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFG 351
+LE E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FG
Sbjct: 325 DLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFG 382
Query: 352 GRVVRATFYDEERFSKNELA 371
GRVV+A FY+ ++F +LA
Sbjct: 383 GRVVKACFYNLDKFRVLDLA 402
>gi|22779924|ref|NP_690037.1| splicing factor 45 [Mus musculus]
gi|34925312|sp|Q8JZX4.1|SPF45_MOUSE RecName: Full=Splicing factor 45; AltName: Full=45 kDa-splicing
factor; AltName: Full=RNA-binding motif protein 17
gi|3746840|gb|AAC64085.1| 45kDa splicing factor [Mus musculus]
gi|22028328|gb|AAH34896.1| RNA binding motif protein 17 [Mus musculus]
Length = 405
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 201/440 (45%), Gaps = 113/440 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIADTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + SR
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKSVNFNGP-------PTRVLLLRNMVGPGEVDD 291
L KT +R G I+ +A+E + + + P PT+V+LLRNMVG GEVD+
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKGEAQDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDE 324
Query: 292 ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFG 351
+LE E EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FG
Sbjct: 325 DLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFG 382
Query: 352 GRVVRATFYDEERFSKNELA 371
GRVV+A FY+ ++F +LA
Sbjct: 383 GRVVKACFYNLDKFRVLDLA 402
>gi|149436980|ref|XP_001510396.1| PREDICTED: splicing factor 45 isoform 2 [Ornithorhynchus anatinus]
Length = 401
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 174/338 (51%), Gaps = 56/338 (16%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 73 PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 128
Query: 133 QEGEERERREREERENASASR-------LNMSGEEAWKRRAAMSSGGVPP---------- 175
+E EERE+R ++ E + SR + E ++R+ + PP
Sbjct: 129 KEIEEREKRRKDRHEASGFSRRPDPDSEEDEDYERERRKRSMGGAAIAPPTSLVEKDKEL 188
Query: 176 -----------------RSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
++ PPPV E G S + +G T A ++
Sbjct: 189 PREFPFEEESRSRSQSSKAAIPPPVYDEQERPRS--PTGPSNSFLANMGG----TVAHKI 242
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGP 273
M K G++EGQGLG+ EQG++T L KT +R G I+ +++E + KK S
Sbjct: 243 MQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDSTEKDASKKSDSNPLTEILKC 302
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P P DEAVRIF++FE
Sbjct: 303 PTKVVLLRNMVGAGEVDEDLEGETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFE 360
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
R E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 361 RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 398
>gi|339522017|gb|AEJ84173.1| RNA-binding motif protein 17 [Capra hircus]
Length = 401
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 201/418 (48%), Gaps = 73/418 (17%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTL--RKPSSIFAPPQ-----TILKPQSKP 57
LY DL + + K T WS + K+ L +K + A Q T+L P +
Sbjct: 3 LYDDLGVETSDSK-----TEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVTDL 57
Query: 58 KTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVT-----STVIEEYDPARPNDYEDYR 112
K +S + +P P AA L P GV+ S + +EYDP PNDYE
Sbjct: 58 KRGGSSDAGQIVDTP-----PHGAAGLKGPVPRGVSAGEVLSPLADEYDPMFPNDYEKV- 111
Query: 113 REKKKKAVDAEIRRELERRRQEGEERERREREERENASASR------LNMSGEEAWKRRA 166
K+ + R+ R++E EERE+R ++ E + SR E +R+
Sbjct: 112 ---VKRRREERQRQRGVGRQKEIEEREKRRKDRHEASGISRRPDPDSDEDEDYERERRKR 168
Query: 167 AMSSGGVP-----------------------PRSPS-----PPPVNVESGGGGGGFTIGK 198
+M G + PRS S PPPV E G
Sbjct: 169 SMGGGAIAHPTSLVEKGKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPGN 228
Query: 199 SETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NA 256
S + +G T A ++M K G++ GQGLG+ EQG+ T L KT +R G I+ +A
Sbjct: 229 SFLASMG------GTVAHKIMQKYGFRGGQGLGKHEQGLRTALSVEKTSKRGGKIIVGDA 282
Query: 257 SENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF 313
+E + KK S PT+V+LLRNMVG GEVD +LE E C KYG V + +IF
Sbjct: 283 TEKDAAKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDGDLEVETKEGCEKYGKVGKCVIF 342
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
EI P P DEAVRIF++FER E KA++DL+GR+FGGRVV+ FY+ ++F +LA
Sbjct: 343 EI--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKPCFYNLDKFRVLDLA 398
>gi|343958878|dbj|BAK63294.1| splicing factor 45 [Pan troglodytes]
Length = 401
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 199/436 (45%), Gaps = 109/436 (25%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSL 64
LY DL + +++ T WS + K+ L+ + Q+K + T+ S
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALT--------QAKSQRTKQST 49
Query: 65 PTRPHSSPAIAPSPDD----------AAALPQPALVGVTSTVI-----EEYDPARPNDYE 109
P S DD AA L P G ++ + +EYDP PNDYE
Sbjct: 50 VLAPVIDLKRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYE 109
Query: 110 DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL--------------- 154
K+ + R+ R++E EERE+R ++ E + +R
Sbjct: 110 KVV----KRQREERQRQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERER 165
Query: 155 ---NMSG----------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S +PP RSP+
Sbjct: 166 RKRSMGGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTG 225
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A ++M K G++EGQGLG+ EQG++T
Sbjct: 226 PSNSFLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTA 264
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
L KT +R G I+ +A+E + KK S PT+V+LLRNMVG GEVD++LE
Sbjct: 265 LSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEV 324
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC KYG V + +IFE P P DEAVRIF++FER E KA++DL+GR+FGGRVV
Sbjct: 325 ETKEECEKYGKVGKCVIFET--PGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVV 382
Query: 356 RATFYDEERFSKNELA 371
+ FY+ ++F +LA
Sbjct: 383 KVCFYNLDKFRVLDLA 398
>gi|158300105|ref|XP_320093.4| AGAP009296-PA [Anopheles gambiae str. PEST]
gi|157013841|gb|EAA15153.4| AGAP009296-PA [Anopheles gambiae str. PEST]
Length = 426
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 152/454 (33%), Positives = 203/454 (44%), Gaps = 120/454 (26%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTL--RKPSSIFAPPQTIL-KPQSKPKTTQ 61
LY DL DK WSS K+ P L +K + P+ IL KP SK
Sbjct: 3 LYDDLDTKHGPDKVAG-----WSSGLKLFQPQLQVKKVNQPAITPKAILRKPGSK----- 52
Query: 62 NSLPTRPHSSPAIAPSPDDAA------------------ALPQPALVGVTST----VIEE 99
+LP S P S D + A P P VT V++E
Sbjct: 53 -TLPFLAASGPGPTTSLIDPSSGIVVKSAKGPITVTTTNATPNPISAAVTDDYNWDVVDE 111
Query: 100 YDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGE 159
YDP PN+Y+ +++K K + Q G R RRE + + A R + E
Sbjct: 112 YDPMWPNEYDKLVKDRKAKEPPI-------KPLQGGFGRNRREY--KRSGFAGRPSSDDE 162
Query: 160 EAWKRRAAMSSGGVPPRSPSPPPVNVESGGGG----GGFTIGKSETSGL----------- 204
E ++ + SG + +PPP ES GG GG +S +
Sbjct: 163 EEFRPGQSRPSGA----AIAPPPSLQESCAGGIPSEGGSKYVRSRSHCALFMDATFCLPS 218
Query: 205 ------------GLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGV 252
L A G + A ++MAK G+K+GQGLG+QEQG+ L KT +R G
Sbjct: 219 DQNSRSLSYRVSQLAAYGGSSVAAKIMAKYGFKDGQGLGKQEQGMAVALQVEKTSKRGGR 278
Query: 253 IVN-----------------------------------ASENKSEKKVKSVNFNGPPTRV 277
IV+ ASE + +KS P++V
Sbjct: 279 IVHEKDISATTSTVSGSGGGSGSGTEIVTTPPSASQGAASEPSITEIMKS------PSKV 332
Query: 278 LLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
+LLRNMVGPG+VDDELE EV EC KYG V V+I E+ PN +EAVRIFV+F+R E
Sbjct: 333 VLLRNMVGPGDVDDELEPEVKDECNTKYGDVVTVVIHEV--PNVVPEEAVRIFVEFKRME 390
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
KA++DL+GRFFGGR VRA FY++E+F +L
Sbjct: 391 SAIKAVVDLNGRFFGGRQVRAGFYNQEKFENMDL 424
>gi|449672593|ref|XP_004207745.1| PREDICTED: splicing factor 45-like [Hydra magnipapillata]
Length = 340
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 116/176 (65%), Gaps = 19/176 (10%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSV---- 268
A ++MAK GWKEGQGLGR+EQG++T L KT +RAG I+N K + K K V
Sbjct: 166 VVASQIMAKYGWKEGQGLGREEQGLSTCLQVEKTGKRAGKIINKDVEKIKNKEKDVPSPP 225
Query: 269 ---------NFNGP---PTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 315
N P++V+LL NMVGPGEVDDEL+ E+ EC +KYG + +VLIFEI
Sbjct: 226 PDVEEVIESNITDKMKNPSKVVLLMNMVGPGEVDDELQPEIEEECGSKYGEINKVLIFEI 285
Query: 316 TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
P+ +EAVRIFV+F+R E KAL+DL+GRFFGGR V A FY+ +RF + +LA
Sbjct: 286 --PDAVEEEAVRIFVEFKRIESAVKALVDLNGRFFGGRSVSAQFYNLDRFRRLDLA 339
>gi|327272018|ref|XP_003220783.1| PREDICTED: splicing factor 45-like [Anolis carolinensis]
Length = 379
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 114/167 (68%), Gaps = 8/167 (4%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAG-VIVNASENKSEKKVKS---- 267
T A ++M K G++EGQGLG+ EQG++T L KT +R G +IV S +K++ KS
Sbjct: 214 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDSADKADSSKKSDSNP 273
Query: 268 -VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P P DEAV
Sbjct: 274 LTEILKCPTKVVLLRNMVGAGEVDEDLEGETKEECEKYGKVGKCVIFEI--PGAPDDEAV 331
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPL 373
RIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA L
Sbjct: 332 RIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAEL 378
>gi|348536528|ref|XP_003455748.1| PREDICTED: splicing factor 45-like [Oreochromis niloticus]
Length = 403
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 200/413 (48%), Gaps = 73/413 (17%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQT-------ILKPQSKP 57
LY DL + ++T T WS + K+ L+ + +T +L P
Sbjct: 3 LYDDLGVGA-----SDTKTEGWSKNFKLLQSQLKVKKAALTQAKTQRMKQTTVLAPVIDL 57
Query: 58 KTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTST-----VIEEYDPARPNDYEDYR 112
K +S + +P P AA L G +++ + +EYDP PNDYE
Sbjct: 58 KRGSSSDERQITDAP-----PHVAAGLKDAVPSGFSASDVLIPLADEYDPMFPNDYE--- 109
Query: 113 REKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLN---------MSGEEAWK 163
+ K+ + R+ + R++E EERE++ ++ E+ + S + EE K
Sbjct: 110 -KVVKRHREERQRQREQERQKEIEEREKKRKDRHESGAPSGFSRFPAAEEDSDEEEEYEK 168
Query: 164 RRAAMSSGGVPPRSPSPPPVNVESGGGGGGF-----------------TIGKSE------ 200
R S GG + +PP V+ G + S+
Sbjct: 169 ERRKRSMGGA---AIAPPSSLVDRDGSSYSYEDEGRPARGSKAAIPPPMYEDSDRPRSPP 225
Query: 201 --TSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NA 256
TS GG T A ++M K G+KEGQGLG+ EQG++T L KT +R G I+ +A
Sbjct: 226 GPTSSFLANMGG--TVAHKIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDA 283
Query: 257 SENKSEKKVKSVN----FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLI 312
+E K N PT+V+LLRNMVG GEVD++LE E EC KYG V + +I
Sbjct: 284 AEKPDSSKKSDANPLTEILKNPTKVVLLRNMVGRGEVDEDLEGETKEECEKYGKVVKCVI 343
Query: 313 FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
FEI E P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F
Sbjct: 344 FEIAE--VPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKF 394
>gi|349604885|gb|AEQ00311.1| Splicing factor 45-like protein, partial [Equus caballus]
Length = 269
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 113/164 (68%), Gaps = 7/164 (4%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKSEKKVKS--- 267
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +A+E + KK S
Sbjct: 105 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDAAKKSDSNPL 164
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVR 327
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P P DEAVR
Sbjct: 165 TEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVR 222
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
IF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 223 IFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 266
>gi|358337076|dbj|GAA29745.2| splicing factor 45 [Clonorchis sinensis]
Length = 445
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 119/191 (62%), Gaps = 17/191 (8%)
Query: 198 KSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS 257
+SET G G AA +MMA+MG++EGQGLGR+ QG+ T L+ KT RR G I++
Sbjct: 255 ESETVGATTKFGINAVAA-KMMARMGYREGQGLGRESQGMATALVVEKTSRRGGKIIHER 313
Query: 258 E--------------NKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAK 303
+ + E+ + ++ + V+LLRNM GPGEVDD+L+ E ECAK
Sbjct: 314 DQQRQQATQQNPLPDSTVEETINNLPLPENRSCVILLRNMCGPGEVDDDLQPETAEECAK 373
Query: 304 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
YG V +IFE+ + P DEAVRIFV+FE + TKA++DL+GRFF GRVV+A FYD E
Sbjct: 374 YGKVVSCMIFELADT--PDDEAVRIFVEFESEDGATKAVLDLNGRFFAGRVVKAGFYDAE 431
Query: 364 RFSKNELAPLP 374
+F ELA P
Sbjct: 432 KFRNLELADAP 442
>gi|440803557|gb|ELR24448.1| Gpatch domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 345
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 168/350 (48%), Gaps = 85/350 (24%)
Query: 97 IEEYDPARPNDYEDYRREKKKKA--------------------------VDAEIRRELER 130
++EYDPARPNDYE+Y E++ + +D + RE R
Sbjct: 12 LDEYDPARPNDYEEYVNERQARQQHREMERQQREQEREQQQWGFQPSVPMDEDDFREAPR 71
Query: 131 -----RRQEGEERERREREERENASASRL--NMSGEE--------AWKRRAAMSSGGV-- 173
R + R RE S+++L N+SGEE A +A M+ V
Sbjct: 72 SSTHHRYSPPSQPSRSTRESSPPPSSAKLDLNVSGEELSAGMQPAASPAQAMMAPSNVHD 131
Query: 174 ---------PPRSPS--------PPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQ 216
P R+P PPP + +S T S GG ++ A+
Sbjct: 132 PYGYDTEETPTRAPQAARVSNHIPPPPSFDSPAPTPTPTRANS---------GGGLSIAE 182
Query: 217 RMMAKMGWKEGQGLGRQEQGITTPLMARKTDR----RAGVIVNASEN-----KSEKKVKS 267
+MM KMGW EG+GLG++ QGI PL +K ++ +GVI++ + +KV+S
Sbjct: 183 QMMKKMGWTEGRGLGKEGQGILNPLEHKKLNKGKGPASGVIIDVNSKPGSLLSHRRKVES 242
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVR 327
++V+LLRNMVGPGEVD++LE E EC KYG V R I+E P P D++VR
Sbjct: 243 -------SKVILLRNMVGPGEVDEDLESETAEECTKYGPVVRCKIYEEKNPMVPSDKSVR 295
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEI 377
IFVQF + KA+ L GRFF R V A F+DEER+ +LA P E
Sbjct: 296 IFVQFTTLDSALKAINSLHGRFFAKRQVEAIFFDEERWEHGDLASHPDEY 345
>gi|156302100|ref|XP_001617446.1| hypothetical protein NEMVEDRAFT_v1g231688 [Nematostella vectensis]
gi|156193855|gb|EDO25346.1| predicted protein [Nematostella vectensis]
Length = 158
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 110/156 (70%), Gaps = 4/156 (2%)
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGP---PT 275
MAK GWK+GQGLG+ EQGI T L KT +R G I+N + ++ + + + G P+
Sbjct: 1 MAKYGWKDGQGLGKSEQGINTCLQVEKTSKRGGKIINQEKEAAKLQAEGDSLVGAMKNPS 60
Query: 276 RVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERS 335
+V+LLRNMVGPGEVDD+L+ E ECAKYG V +V+I+EI P DEAVRIFV+F R
Sbjct: 61 KVVLLRNMVGPGEVDDDLQPETAEECAKYGEVVKVIIYEIP-VGAPDDEAVRIFVEFTRM 119
Query: 336 EQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
E KA++DL+GR+FGGR V+A F++ ++F + +LA
Sbjct: 120 ESAIKAVVDLNGRYFGGRTVKANFFNLDKFRRLDLA 155
>gi|225710884|gb|ACO11288.1| Splicing factor 45 [Caligus rogercresseyi]
Length = 417
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 158/311 (50%), Gaps = 43/311 (13%)
Query: 95 TVIEEYDPARPNDYE-------DYRREKKKKAVDAEIRRELERRRQEGEERERREREERE 147
T + EYDP PNDYE D +R+ + + + RR E R R +
Sbjct: 113 TPVNEYDPLWPNDYEKVISDIRDMKRQSQDDGAEQKKRRYTESSRDRARGRFNQTNLSPS 172
Query: 148 NASASRLNMSGEEAWKRRAAMSSGGVPPRSPSP--------PPVNVESGGGGGGFTIGKS 199
++ SR S +E R +P P PP ++ GG T+ K
Sbjct: 173 SSGFSRRRHSDDEEDDERRNNRRRRDRRSNPGPSSGGAAIAPPPSLTETSNPGGNTVDK- 231
Query: 200 ETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASEN 259
G G G + A ++MAK G+K+GQGLGR+EQGI+ L KT +R G IV +
Sbjct: 232 -----GGGMAG-LDVAAKIMAKYGYKQGQGLGREEQGISMALSVEKTSKRGGRIVQEKDF 285
Query: 260 KSEK-------------------KVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSE 300
K E+ K + P++V+L +NMVGPGEVD+ LE EV E
Sbjct: 286 KPEESPGDEYGGGGGTPASVGGGKPSITDMMKNPSKVVLCKNMVGPGEVDEFLEPEVKEE 345
Query: 301 CA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
C KYG V +V+I+E + + + AVRIF++F+R E KA++DL+GRFFGGR V+A F
Sbjct: 346 CNEKYGDVIKVVIYEFSNSSAE-ENAVRIFIEFKRVESAIKAVVDLNGRFFGGREVQANF 404
Query: 360 YDEERFSKNEL 370
YD E+F+ N+L
Sbjct: 405 YDCEKFNSNKL 415
>gi|340719031|ref|XP_003397961.1| PREDICTED: splicing factor 45-like [Bombus terrestris]
Length = 382
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 191/405 (47%), Gaps = 78/405 (19%)
Query: 14 DEDKPTNTTTTV-WSSSAKMAPPTL---------------RKPSSIFAPPQTILKPQSKP 57
D DK + V WSSS K+ L RK +++ AP ++ +SK
Sbjct: 6 DFDKHRTSEKVVGWSSSIKLLQSQLQLKKAATTQPKREQYRKATAVLAP---VIDLKSKA 62
Query: 58 KTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTS----TVIEEYDPARPNDYEDYRR 113
PH++P + + + +GV VI EYDP PN+Y+ +
Sbjct: 63 NRNTEREDDGPHNNPLSSGTV---------SSIGVGGEFDWNVINEYDPMWPNEYDKVVK 113
Query: 114 EKKKKAVDAEIRRELERRR--QEGEERERR---EREERENASASRLNMSGEEAWKRRAAM 168
E R+L R QE E R+RR R E AS+ M E + R
Sbjct: 114 E----------LRDLRDREHDQETEMRKRRRDSSRFEDTQASSGNSTMIPPERDEERTPT 163
Query: 169 SSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQ 228
S G + +PPP ES + +G AA ++MAK G+KEGQ
Sbjct: 164 SRGIAGGAAIAPPPSLQESSE-----LPPPTPRPPTSIGYATSSVAA-KIMAKYGFKEGQ 217
Query: 229 GLGRQEQGITTPLMARKTDRRAGVIVNASEN-------------KSEKKVKSVN------ 269
GLG++EQG++ L KT +R G IV E ++++V +
Sbjct: 218 GLGKKEQGMSVALQVEKTSKRGGRIVGEREQLMPPPPPVAVSPPPTQQQVAPLQPSEEPS 277
Query: 270 ---FNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEA 325
P++V+LLRNMVGPGEVDD+LE EV EC KYG V RV+I E+TE +EA
Sbjct: 278 ITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEVTEA--APEEA 335
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VRIFV+F+R E KA++DL+GRFFGGR V+A FY E+ +L
Sbjct: 336 VRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYSSEKLDSLQL 380
>gi|432089731|gb|ELK23548.1| Splicing factor 45 [Myotis davidii]
Length = 440
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 111/164 (67%), Gaps = 7/164 (4%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKSEKKVKS--- 267
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +E + KK S
Sbjct: 276 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGEVTEKDAAKKSDSNPL 335
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVR 327
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P P DEAVR
Sbjct: 336 TEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVR 393
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
IF++FER E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 394 IFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 437
>gi|60600259|gb|AAX26673.1| unknown [Schistosoma japonicum]
Length = 182
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 111/181 (61%), Gaps = 26/181 (14%)
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSV--------- 268
MMA+MG++EGQGLGR+ QG++T LM KT RR G I++ + + ++ +
Sbjct: 1 MMARMGYREGQGLGRESQGMSTALMVEKTSRRGGKIIHEKDQQRQQTQANTTSTNNNNNL 60
Query: 269 ----------NFNGPP-----TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF 313
FN P + V+LLRNM GPGEVDD+LE E ECAKYG V +I+
Sbjct: 61 PSYLNANVEETFNNLPLPENRSCVILLRNMCGPGEVDDDLEPETAEECAKYGKVVMCMIY 120
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPL 373
E+ P P DE VRIFV+F+ E TKA++DL+GRFF GRVV+A FYD E+F ELA
Sbjct: 121 EL--PEAPDDEVVRIFVEFDSEEAATKAVLDLNGRFFAGRVVKAGFYDAEKFRNLELADA 178
Query: 374 P 374
P
Sbjct: 179 P 179
>gi|350399021|ref|XP_003485388.1| PREDICTED: splicing factor 45-like [Bombus impatiens]
Length = 383
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 184/405 (45%), Gaps = 77/405 (19%)
Query: 14 DEDKPTNTTTTV-WSSSAKMAPPTL---------------RKPSSIFAPPQTILKPQSKP 57
D DK + V WSSS K+ L RK +++ AP ++ +SK
Sbjct: 6 DFDKHRTSEKVVGWSSSIKLLQSQLQLKKAATTQPKREQYRKATAVLAP---VIDLKSKA 62
Query: 58 KTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTS----TVIEEYDPARPNDYEDYRR 113
PH++P + + + +GV VI EYDP PN+Y+ +
Sbjct: 63 NRNTEREDDGPHNNPLSSGTV---------SSIGVGGEFDWNVINEYDPMWPNEYDKVVK 113
Query: 114 EKKKKAVDAEIRRELERRR--QEGEERERR---EREERENASASRLNMSGEEAWKRRAAM 168
E R+L R QE E R+RR R E AS+ M E + R
Sbjct: 114 E----------LRDLRDREHDQETEMRKRRRDSSRFEDTQASSGNSTMIPPERDEERTPT 163
Query: 169 SSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQ 228
S G + +PPP ES + G + A ++MAK G+KEGQ
Sbjct: 164 SRGIAGGAAIAPPPSLQESSELPPPTQPRPPTSIGYATS-----SVAAKIMAKYGFKEGQ 218
Query: 229 GLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKS--------------------- 267
GLG++EQG++ L KT +R G IV E
Sbjct: 219 GLGKKEQGMSVALQVEKTSKRGGRIVGEREQLMPPPPPVAVSPPPTQQQVPPLQPSEEPS 278
Query: 268 -VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEA 325
P++V+LLRNMVGPGEVDD+LE EV EC KYG V RV+I E+TE +EA
Sbjct: 279 ITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEVTEA--APEEA 336
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VRIFV+F+R E KA++DL+GRFFGGR V+A FY E+ +L
Sbjct: 337 VRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYSSEKLDSLQL 381
>gi|156542185|ref|XP_001599827.1| PREDICTED: splicing factor 45 [Nasonia vitripennis]
Length = 383
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 148/303 (48%), Gaps = 40/303 (13%)
Query: 95 TVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL 154
VI EYDP PN+YE +E + D R + Q +R RRE E+ S +
Sbjct: 92 NVINEYDPTWPNEYEKVVKELR----DLRDREHDQESEQRSTKRSRRENTHFEDNQLSSI 147
Query: 155 NMSGEEAWKRRAAMSSG------GVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGA 208
E + R S PP P V S G
Sbjct: 148 AAMSNERDEERTTFRSNPAGATIAPPPSLQETPEVVPTPAPAPPPPPPRPSLNQGYATS- 206
Query: 209 GGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE---------- 258
+ A ++MAK G+KEGQGLG++EQG++ L KT +R G IV+ E
Sbjct: 207 ----SVAAKIMAKYGFKEGQGLGKKEQGMSVALQVEKTSKRGGRIVSEKEQLMPPPQLMN 262
Query: 259 ----------NKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTV 307
N+ E + + P++V+LLRNMVGPGEVDD+LE EV EC KYG V
Sbjct: 263 MSPPSNSQQFNQDEPSITEIM--KSPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDV 320
Query: 308 TRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
RV+I E+ + +EAVRIFV+F+R E KA++DL+GRFFGGR V+A FY E+ +
Sbjct: 321 IRVVIHEVIDAQ--PEEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYSVEKLNN 378
Query: 368 NEL 370
+L
Sbjct: 379 FQL 381
>gi|55742338|ref|NP_001006732.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
gi|49523277|gb|AAH75485.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
gi|89268723|emb|CAJ82819.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
Length = 399
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 136/431 (31%), Positives = 200/431 (46%), Gaps = 101/431 (23%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLR--------------KPSSIFAPPQTI 50
LY DL + +++ T WS + K+ L+ K S++ AP
Sbjct: 3 LYDDLGVET-----SDSKTEGWSKNFKLLQSQLQVKKAALTQAKTQRTKQSTVLAP-VID 56
Query: 51 LKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVG-VTSTVIEEYDPARPNDYE 109
LK S + Q + P+ PH I S +P G V + +EYDP PN+YE
Sbjct: 57 LKRASAAEERQIADPS-PHVGAGIKES------VPSGFSAGEVLVPLADEYDPMFPNEYE 109
Query: 110 -------------------------DYRREKKKKAVDAEIRRELERRRQEGEERERRERE 144
+ RR+ + +A R + E E ERERR+R
Sbjct: 110 KVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPESDEDEDYERERRKRT 169
Query: 145 ERENASASRLNM----------SGEEAWKRRAAMSSGGVPP---------RSPSPPPVNV 185
A A ++ + ++ + R M+ +PP RSP+ P +
Sbjct: 170 MGGAAIAPPTSLMEKDRESIVPAYDDEPRPRPPMAKAAIPPPMYDEPERPRSPTGPSNSF 229
Query: 186 ESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARK 245
+ GG T A ++M K G++EGQGLG+ EQG++T L K
Sbjct: 230 LANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEK 268
Query: 246 TDRRAG-VIVNASENKSEKKVKS-----VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGS 299
T +R G +I+ +K E K+ PT+V+LL+NMVG GEVD++LE E
Sbjct: 269 TSKRGGKIIIGDLADKVEAAKKADPNPLTEILKNPTKVVLLQNMVGAGEVDEDLEAETKE 328
Query: 300 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
EC KYG V + +IFEI P P DEAVRIF++FER E KA++DL+GR+FGGR+V+A F
Sbjct: 329 ECEKYGKVGKCVIFEI--PGTPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRIVKACF 386
Query: 360 YDEERFSKNEL 370
Y+ ++F +L
Sbjct: 387 YNLDKFRTLDL 397
>gi|66516089|ref|XP_393194.2| PREDICTED: splicing factor 45-like [Apis mellifera]
gi|380028015|ref|XP_003697707.1| PREDICTED: splicing factor 45-like [Apis florea]
Length = 381
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 186/412 (45%), Gaps = 81/412 (19%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTL---------------RKPSSIFAPPQT 49
LY D + T+ WSSS K+ L RK +++ AP
Sbjct: 3 LYDDF-----DKHRTSEKVAGWSSSIKLLQSQLQLKKAATTQPKREQYRKATAVLAP--- 54
Query: 50 ILKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTS----TVIEEYDPARP 105
++ +SK + PH++P + + + +GV VI EYDP P
Sbjct: 55 VIDLKSKANRNADRDDDGPHNNPLSSGTV---------SSIGVGGEFDWNVINEYDPMWP 105
Query: 106 NDYEDYRREKKKKAVDAEIRRELERRR--QEGEERERR---EREERENASASRLNMSGEE 160
N+Y+ +E R+L R QE E R+RR R E S+ M E
Sbjct: 106 NEYDKVVKE----------LRDLRDREHDQETEMRKRRRDSSRFEDTQTSSGNSTMIPPE 155
Query: 161 AWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMA 220
+ R S G + +PPP ES + +G + A ++MA
Sbjct: 156 RDEERTPTSRGIAGGAAIAPPPSLQESSDLP---PPAPRPPTSMGYATS---SVAAKIMA 209
Query: 221 KMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKS------------- 267
K G+KEGQGLG++EQG++ L KT +R G IV E
Sbjct: 210 KYGFKEGQGLGKKEQGMSVALQVEKTSKRGGRIVGEREQLMPPPPPVAASPPPQQQIIPP 269
Query: 268 --------VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEP 318
P++V+LLRNMVGPGEVDD+LE EV EC KYG V RV+I E+TE
Sbjct: 270 QPSEEPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEVTEA 329
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+EAVRIFV+F+R E KA++DL+GRFFGGR V+A FY E+ +L
Sbjct: 330 --APEEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYSSEKLDSLQL 379
>gi|307184500|gb|EFN70889.1| Splicing factor 45 [Camponotus floridanus]
Length = 380
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 150/301 (49%), Gaps = 43/301 (14%)
Query: 95 TVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERRER----EERENAS 150
V+ EYDP PN+YE +E R++ R E E R+RR E+ + A
Sbjct: 96 NVVNEYDPMWPNEYEKVVKE----------LRDIRDREHETEMRKRRRDSTRFEDTQAAG 145
Query: 151 ASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGG 210
+ M E + R S G V + +PPP ES +T LG
Sbjct: 146 SGNSTMIPPERDEERTPSSRGVVGGAAIAPPPSLQESSELP---PPPPRQTPNLGYATS- 201
Query: 211 QMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKS--- 267
+ A ++MAK G+KEGQGLG++EQG++ L KT +R G IV E
Sbjct: 202 --SVAAKIMAKYGFKEGQGLGKKEQGMSVALQVEKTSKRGGRIVGEREQLMPPPPPLTAS 259
Query: 268 -----------------VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTR 309
P++V+LLRNMVGPGEVDD+LE EV EC KYG V R
Sbjct: 260 PPQNQLSQQPPAEEPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVAR 319
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
V+I E+ E +EAVRIFV+F+R E KA++DL+GRFFGGR V+A FY E+ +
Sbjct: 320 VIIHEVIEA--APEEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYSSEKLDNLQ 377
Query: 370 L 370
L
Sbjct: 378 L 378
>gi|170588083|ref|XP_001898803.1| G-patch domain containing protein [Brugia malayi]
gi|158593016|gb|EDP31611.1| G-patch domain containing protein [Brugia malayi]
Length = 373
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 150/291 (51%), Gaps = 38/291 (13%)
Query: 96 VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLN 155
V +EY+P P DY ++++ ++ +I +E+ R + E +R + ++
Sbjct: 103 VEDEYNPTAPTDYAKHKQKMDERKAKEKIAKEIAERLSREHQEEIAKRTAGAAIAPPKIL 162
Query: 156 MSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAA 215
M + + A +G S PPP + S G G GLG+ A
Sbjct: 163 MEEDSKVESLATPDAGNTA--SEMPPPSFIPSFGAG----------KGLGVAAN------ 204
Query: 216 QRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSV-----NF 270
+M+K G+KEG GLGR QG++T L + + +GVIVN E + ++ +
Sbjct: 205 --IMSKFGYKEGAGLGRSGQGMSTALKVERLGKNSGVIVNEHELNTRAEISASPPPLPTI 262
Query: 271 NGPP-----------TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPN 319
N P +R+LLLRNMV P E+DD+LE EV E KYG V +V+IF + + +
Sbjct: 263 NATPAANMTEALKQSSRILLLRNMVSPDEIDDQLEPEVKDEMKKYGQVNKVVIFRLLQAS 322
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
DEAVRIF++F Q KA +DL+GRFFGGR ++A+FYD E ++ N+
Sbjct: 323 --DDEAVRIFIEFTNVGQAIKAFVDLNGRFFGGRSIKASFYDLEAYNANQF 371
>gi|390337510|ref|XP_797513.2| PREDICTED: splicing factor 45-like isoform 2 [Strongylocentrotus
purpuratus]
gi|390337512|ref|XP_003724580.1| PREDICTED: splicing factor 45-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 418
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 115/193 (59%), Gaps = 31/193 (16%)
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEK 263
+GLG + A ++MAK G+KEG GLG+ EQGI+T L KT RR G I+N + E+
Sbjct: 229 VGLGVD---SVAMKIMAKYGFKEGAGLGKSEQGISTALQVEKTSRRGGKIINKDKEIQEQ 285
Query: 264 KVKSVNF-----------------NGP---------PTRVLLLRNMVGPGEVDDELEDEV 297
V GP PT++LLL NMVGPGEVDD+L+ E
Sbjct: 286 VVMPPPPMPPPAFPPPAFPPAAPKTGPAPITDVLRNPTKILLLTNMVGPGEVDDDLQPET 345
Query: 298 GSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
EC+KYG V +VLI+E +P EAVRIFV+F R E KA++DL+GRFFGGR+V+
Sbjct: 346 AEECSKYGEVVKVLIYE--DPLKVATEAVRIFVEFTRVEAAVKAVVDLNGRFFGGRIVKG 403
Query: 358 TFYDEERFSKNEL 370
+FYD ++F K EL
Sbjct: 404 SFYDPQKFGKFEL 416
>gi|402594800|gb|EJW88726.1| G-patch domain-containing protein [Wuchereria bancrofti]
Length = 373
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 150/291 (51%), Gaps = 38/291 (13%)
Query: 96 VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLN 155
V +EY+P P DY ++++ ++ +I +E+ R + E +R + ++
Sbjct: 103 VEDEYNPTAPTDYAKHKQKMDERKAKEKIAKEIAERLSREHQEEIAKRTAGVAIAPPKIL 162
Query: 156 MSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAA 215
M + + A +G S PPP + S G G GLG+ A
Sbjct: 163 MEEDSKVEPLATPDAGNT--TSEMPPPSFIPSFGAG----------KGLGVAAN------ 204
Query: 216 QRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSV-----NF 270
+M+K G+KEG GLGR QG++T L + + +GVIVN E + ++ +
Sbjct: 205 --IMSKFGYKEGAGLGRSGQGMSTALKVERLGKNSGVIVNEHELNTRAEISASPPPLPTI 262
Query: 271 NGPP-----------TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPN 319
N P +R+LLLRNMV P E+DD+LE EV E KYG V +V+IF + + +
Sbjct: 263 NATPATNMTEALKQSSRILLLRNMVSPDEIDDQLEPEVKDEMKKYGQVNKVVIFRLLQAS 322
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
DEAVRIF++F Q KA +DL+GRFFGGR ++A+FYD E ++ N+
Sbjct: 323 --DDEAVRIFIEFTNVGQAIKAFVDLNGRFFGGRSIKASFYDLEAYNANQF 371
>gi|170054316|ref|XP_001863072.1| splicing factor 45 [Culex quinquefasciatus]
gi|167874592|gb|EDS37975.1| splicing factor 45 [Culex quinquefasciatus]
Length = 399
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 157/312 (50%), Gaps = 57/312 (18%)
Query: 96 VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREE---------- 145
V +EYDP PN+Y+ +++K K V +++ Q R RRE +
Sbjct: 107 VTDEYDPLWPNEYDKLVKDRKAKDV------PVQKAPQNNYGRNRREYKRGVHLNKNMGD 160
Query: 146 -----RENASASRLNMSGEEAWK---RRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIG 197
+++ A R E+ ++ +RA + PP S + G T
Sbjct: 161 DGPGGKKSGFAGRPTSDDEDEFQPGQQRAVGGAAIAPPASLQESIAQIPEGSKIAPLT-- 218
Query: 198 KSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA- 256
A G + A ++MAK G+K+GQGLG+QEQG++ L KT +R G IV+
Sbjct: 219 ----------AYGGSSVAAKIMAKYGFKDGQGLGKQEQGMSMALQVEKTSKRGGRIVHEK 268
Query: 257 --------SENKSEKKVKSVNFN---------GPPTRVLLLRNMVGPGEVDDELEDEVGS 299
S ++ F P++++LLRNMVGPG+VDD+LE EV
Sbjct: 269 DMPAPDVPSGGAGAGGQTAIPFQEEPSITEIMKSPSKIVLLRNMVGPGDVDDDLEPEVKD 328
Query: 300 EC-AKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
EC KYG V V+I EI PN +E VRIFV+F+R E KA++DL+GRFFGGR VRA
Sbjct: 329 ECHTKYGDVITVVINEI--PNVVPEETVRIFVEFKRMESAIKAVVDLNGRFFGGRQVRAG 386
Query: 359 FYDEERFSKNEL 370
FY +E+F + EL
Sbjct: 387 FYSQEKFERMEL 398
>gi|332374526|gb|AEE62404.1| unknown [Dendroctonus ponderosae]
Length = 392
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 135/232 (58%), Gaps = 25/232 (10%)
Query: 151 ASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGG 210
A R EE + + SGG + +PPP ES K++ +G G
Sbjct: 172 AGRWTAEDEEEERPKPVRPSGGA---AIAPPPSLQESTPDPLPIIPNKAQAAGYG----- 223
Query: 211 QMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA-----------SEN 259
+ A ++MA+ G+KEGQGLGR EQG+++ L KT +R G IV+ S +
Sbjct: 224 -GSVAAKIMARYGFKEGQGLGRMEQGMSSALQVEKTSKRGGRIVHEKDIMPPPPPLDSAD 282
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEP 318
+ + + + N P++V+LL+NMVGPGEVDD+LE EV EC KYG V +I EI P
Sbjct: 283 RKDPPITEIVKN--PSKVVLLKNMVGPGEVDDDLEPEVKDECNTKYGPVASCIIHEI--P 338
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+ +EAVRIFV+F+R E KA++DL+GRFFGGR V+ATFYD E+F +L
Sbjct: 339 HDDPEEAVRIFVEFQRIESAIKAVVDLNGRFFGGRQVKATFYDTEKFDNLQL 390
>gi|312071759|ref|XP_003138756.1| G-patch domain-containing protein [Loa loa]
gi|307766078|gb|EFO25312.1| G-patch domain-containing protein [Loa loa]
Length = 373
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 150/291 (51%), Gaps = 38/291 (13%)
Query: 96 VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLN 155
V +EY+P P DY ++++ ++ +I +E+ R + E +R + ++
Sbjct: 103 VEDEYNPTAPTDYAKHKQKMDERKAKEKIAKEIAERLNREHQEEIAKRTAGAAIAPPKIL 162
Query: 156 MSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAA 215
M + + A+ +G S PPP + S G G GLG+ A
Sbjct: 163 MEEDSRVEPPASPDAGTTA--SEMPPPSFIPSFGAG----------KGLGVAAN------ 204
Query: 216 QRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE--NKSEKKVK---SVNF 270
+M+K G+KEG GLGR QG++T L + + +GVIVN E ++E V
Sbjct: 205 --IMSKFGYKEGAGLGRSGQGMSTALKVERLGKNSGVIVNEHELNARAEASVSPPPLSTI 262
Query: 271 NGPP-----------TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPN 319
N P +R+LLLRNMV P E+DD+LE EV E KYG V +V+IF + + +
Sbjct: 263 NATPAANMTEALKQSSRILLLRNMVSPAEIDDQLEPEVKDEMKKYGQVNKVVIFRLLQAS 322
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
DEAVRIFV+F Q KA +DL+GRFFGGR ++A+FYD E ++ N
Sbjct: 323 --DDEAVRIFVEFTNVGQAIKAFVDLNGRFFGGRSIKASFYDLEAYNANHF 371
>gi|91083973|ref|XP_975149.1| PREDICTED: similar to splicing factor 45 [Tribolium castaneum]
gi|270006716|gb|EFA03164.1| hypothetical protein TcasGA2_TC013083 [Tribolium castaneum]
Length = 387
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 112/174 (64%), Gaps = 20/174 (11%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE-------------- 258
+ A ++MAK G+KEGQGLG+QEQG+ + L KT +R G I++ E
Sbjct: 216 SVAAKIMAKYGFKEGQGLGKQEQGMASALQVEKTSKRGGRIIHEKEIMAAATASPVLETP 275
Query: 259 -NKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEIT 316
N ++ + + N P++V+LL+NMVGPGEVDD+LE EV EC KYG VT V+I E
Sbjct: 276 ANTQQQSITEIIKN--PSKVVLLKNMVGPGEVDDDLEPEVKDECNTKYGEVTSVIIHETQ 333
Query: 317 EPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
N +EAVRIFV+F R E KA++DL+GRFFGGR V+A+FYD E+F +L
Sbjct: 334 AEN--PEEAVRIFVEFRRIESAIKAVVDLNGRFFGGRQVKASFYDTEKFDNLQL 385
>gi|332022266|gb|EGI62581.1| Splicing factor 45 [Acromyrmex echinatior]
Length = 383
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 187/405 (46%), Gaps = 77/405 (19%)
Query: 14 DEDKPTNTTTTV-WSSSAKMAPPTL---------------RKPSSIFAPPQTILKPQSKP 57
D DK T WSS K+ L RK S++ AP ++ +SK
Sbjct: 6 DFDKHRTTEKVAGWSSGIKLLQSQLQLKKAATTQPKREQNRKASAVLAP---VIDLKSKA 62
Query: 58 KTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTS----TVIEEYDPARPNDYEDYRR 113
+ H++P + S + +GV V+ EYDP PN+YE +
Sbjct: 63 NRDVDREDDSTHNNPLSSGSVSN---------IGVGGEFDWNVVNEYDPIWPNEYEKVVK 113
Query: 114 EKKKKAVDAEIR-RELERRRQEGEERERRE---REERENASASRLNMSGEEAWKRRAAMS 169
E + +IR RE + QE E R+RR R E + M E + R S
Sbjct: 114 ELR------DIRDREHD---QETEMRKRRRDSTRFEDTQIAGGNSAMIPPERDEERTPTS 164
Query: 170 SGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQG 229
V + +PPP ES + + LG + A ++MAK G+KEGQG
Sbjct: 165 RAMVGGAAIAPPPSLQESAELP---PPPPRQPTNLGYSTS---SVAAKIMAKYGFKEGQG 218
Query: 230 LGRQEQGITTPLMARKTDRRAGVIVNASEN------KSEKKVKSVNFNGP---------- 273
LG++EQG++ L KT +R G IV E + P
Sbjct: 219 LGKKEQGMSVALQVEKTSKRGGRIVGEKEQLMPPPPPVTASPPQMQLQLPLQSQPQEEPT 278
Query: 274 -------PTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEA 325
P++V+LLRNMVGPGEVD++LE EV EC KYG V RV+I E+ E P +EA
Sbjct: 279 ITEIMKRPSKVVLLRNMVGPGEVDNDLEPEVKDECNTKYGDVARVIIHEVIEA-LP-EEA 336
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VRIFV+F+R E KA++DL+GRFFGGR V+A FY E+ +L
Sbjct: 337 VRIFVEFKRIESAIKAVVDLNGRFFGGRTVKAGFYCNEKLDNLQL 381
>gi|308811492|ref|XP_003083054.1| putative DNA damage repair protein (ISS) [Ostreococcus tauri]
gi|116054932|emb|CAL57009.1| putative DNA damage repair protein (ISS) [Ostreococcus tauri]
Length = 183
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 112/183 (61%), Gaps = 17/183 (9%)
Query: 212 MTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRA-GVIVNASENKSEKKV----- 265
M+AA++MM KMGW +G+GLG+ EQG+TTPL RK A G I+NA +
Sbjct: 1 MSAAEKMMEKMGWTKGRGLGKDEQGMTTPLEVRKDSAGATGKIINARPVFDVSAITSSTG 60
Query: 266 -----------KSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE 314
KSV+ + PTRVLLLRN+V G V + ED+V EC KYG V RVLIFE
Sbjct: 61 RGLGLGETSEGKSVDPSPTPTRVLLLRNIVLAGGVTEATEDQVADECEKYGDVVRVLIFE 120
Query: 315 ITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLP 374
ITE F +DEAVRIF +F E T+AL +L G F RVV+A+++D ++F +L P
Sbjct: 121 ITEDGFAIDEAVRIFTEFVDEEAATRALENLHGNVFANRVVKASYFDVKKFEAGDLGPQE 180
Query: 375 GEI 377
GE+
Sbjct: 181 GEM 183
>gi|147904178|ref|NP_001087532.1| MGC84102 protein [Xenopus laevis]
gi|76779457|gb|AAI06250.1| MGC84102 protein [Xenopus laevis]
Length = 400
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 196/432 (45%), Gaps = 102/432 (23%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLR--------------KPSSIFAPPQTI 50
LY DL + +++ T WS + K+ L+ K S++ AP
Sbjct: 3 LYDDLAVET-----SDSKTEGWSKNFKLLQSQLQVKKAALTQAKTQRTKQSTVLAP-VID 56
Query: 51 LKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVG-VTSTVIEEYDPARPNDYE 109
LK S + Q + T PH I S +P G V + +EYDP PN+YE
Sbjct: 57 LKRGSAAEERQIA-DTHPHVGAGIKES------VPSGFSAGEVLVPLADEYDPMFPNEYE 109
Query: 110 -------------------------DYRREKKKKAVDAEIRRELERRRQEGEERERRER- 143
+ RR+ + +A R + E E ERERR+R
Sbjct: 110 KVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPESDEDEDYERERRKRP 169
Query: 144 ----------EERENASASRLNMSGEEAWKRRAAMSSGGVPP---------RSPSPPPVN 184
EN S + ++ + R M +PP RSP+ P +
Sbjct: 170 MGGAAIAPPSSLMENDRESIVPAYDDDEPRPRPPMGKAAIPPPMYDEPERPRSPTGPSNS 229
Query: 185 VESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR 244
+ GG T A ++M K G++EGQGLG+ EQG++T L
Sbjct: 230 FLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVE 268
Query: 245 KTDRRAGVIVNASENKSEKKVKSVNFN------GPPTRVLLLRNMVGPGEVDDELEDEVG 298
KT +R G I+ + K + N PT+V+LLRNMVG GEVD+ELE E
Sbjct: 269 KTSKRGGKIIVGDLADKVEAAKKADHNPLTEMLKNPTKVVLLRNMVGAGEVDEELEGETK 328
Query: 299 SECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
EC KYG V R +IFEI P P +EAVRIF++FER E KA++DL+GR+FGGR+V+A+
Sbjct: 329 EECEKYGKVGRCVIFEI--PGAPEEEAVRIFLEFERVESAIKAVVDLNGRYFGGRIVKAS 386
Query: 359 FYDEERFSKNEL 370
FY+ ++F +L
Sbjct: 387 FYNLDKFRTLDL 398
>gi|51261675|gb|AAH80073.1| MGC84102 protein [Xenopus laevis]
Length = 400
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 196/432 (45%), Gaps = 102/432 (23%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLR--------------KPSSIFAPPQTI 50
LY DL + +++ T WS + K+ L+ K S++ AP
Sbjct: 3 LYDDLAVET-----SDSKTEGWSKNFKLLQSQLQVKKAALTQAKTQRTKQSTVLAP-VID 56
Query: 51 LKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVG-VTSTVIEEYDPARPNDYE 109
LK S + Q + T PH I S +P G V + +EYDP PN+YE
Sbjct: 57 LKRGSAAEERQVA-DTHPHVGAGIKES------VPSGFSAGEVLVPLADEYDPMFPNEYE 109
Query: 110 -------------------------DYRREKKKKAVDAEIRRELERRRQEGEERERRER- 143
+ RR+ + +A R + E E ERERR+R
Sbjct: 110 KVVKRQREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPESDEDEDYERERRKRP 169
Query: 144 ----------EERENASASRLNMSGEEAWKRRAAMSSGGVPP---------RSPSPPPVN 184
EN S + ++ + R M +PP RSP+ P +
Sbjct: 170 MGGAAIAPPSSLMENDRESIVPAYDDDEPRPRPPMGKAAIPPPMYDEPERPRSPTGPSNS 229
Query: 185 VESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR 244
+ GG T A ++M K G++EGQGLG+ EQG++T L
Sbjct: 230 FLANMGG---------------------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVE 268
Query: 245 KTDRRAGVIVNASENKSEKKVKSVNFN------GPPTRVLLLRNMVGPGEVDDELEDEVG 298
KT +R G I+ + K + N PT+V+LLRNMVG GEVD+ELE E
Sbjct: 269 KTSKRGGKIIVGDLADKVEAAKKADHNPLTEMLKNPTKVVLLRNMVGAGEVDEELEGETK 328
Query: 299 SECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
EC KYG V R +IFEI P P +EAVRIF++FER E KA++DL+GR+FGGR+V+A+
Sbjct: 329 EECEKYGKVGRCVIFEI--PGAPEEEAVRIFLEFERVESAIKAVVDLNGRYFGGRIVKAS 386
Query: 359 FYDEERFSKNEL 370
FY+ ++F +L
Sbjct: 387 FYNLDKFRTLDL 398
>gi|427784313|gb|JAA57608.1| Putative spf45 [Rhipicephalus pulchellus]
Length = 386
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 115/196 (58%), Gaps = 34/196 (17%)
Query: 205 GLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKK 264
GLG+G + AQR+MA+ G+K GQGLG+QEQG++ L KT +R G I++ + E
Sbjct: 195 GLGSG---SVAQRIMARYGYKAGQGLGKQEQGMSQALQVEKTSKRGGKIIHEKDIAKEPL 251
Query: 265 VKS-----------------------------VNFNGPPTRVLLLRNMVGPGEVDDELED 295
+ P++V+LLRNMVGPGEVDD+LE
Sbjct: 252 PPPAPPMPPPMMGPPPSATSQQQQQQQQNESITDMMRNPSKVVLLRNMVGPGEVDDDLEP 311
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC+KYG V R LI+E+ P ++AVRIF++F+ KA++D +GR+FGGR+V
Sbjct: 312 ETKEECSKYGEVVRCLIYEM--PGVADEDAVRIFIEFKSMASAIKAVVDTNGRYFGGRIV 369
Query: 356 RATFYDEERFSKNELA 371
+A+FYD ++F + ELA
Sbjct: 370 KASFYDHDKFKRFELA 385
>gi|427784315|gb|JAA57609.1| Putative mrna splicing factor [Rhipicephalus pulchellus]
Length = 386
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 115/196 (58%), Gaps = 34/196 (17%)
Query: 205 GLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKK 264
GLG+G + AQR+MA+ G+K GQGLG+QEQG++ L KT +R G I++ + E
Sbjct: 195 GLGSG---SVAQRIMARYGYKAGQGLGKQEQGMSQALQVEKTSKRGGKIIHEKDIAKEPL 251
Query: 265 VKS-----------------------------VNFNGPPTRVLLLRNMVGPGEVDDELED 295
+ P++V+LLRNMVGPGEVDD+LE
Sbjct: 252 PPPAPPMPPPMMGPPPSATSQQQQQQQQNESITDMMRNPSKVVLLRNMVGPGEVDDDLEP 311
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E EC+KYG V R LI+E+ P ++AVRIF++F+ KA++D +GR+FGGR+V
Sbjct: 312 ETKEECSKYGEVVRCLIYEM--PGVADEDAVRIFIEFKSMASAIKAVVDTNGRYFGGRIV 369
Query: 356 RATFYDEERFSKNELA 371
+A+FYD ++F + ELA
Sbjct: 370 KASFYDHDKFKRFELA 385
>gi|383858690|ref|XP_003704832.1| PREDICTED: splicing factor 45-like [Megachile rotundata]
Length = 382
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 186/415 (44%), Gaps = 86/415 (20%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTL---------------RKPSSIFAPPQT 49
LY D + T+ WSSS K+ L RK +++ AP
Sbjct: 3 LYDDF-----DKHRTSEKVAGWSSSIKLLQSQLQLKKAATTQPKREQYRKATAVLAPV-I 56
Query: 50 ILKPQSKPKTTQNS--LPTRPHSSPAIAPSPDDAAALPQPALVGVTS----TVIEEYDPA 103
LK ++ T ++ L + P SS ++ +GV V+ EYDP
Sbjct: 57 DLKSKANRNTDRDDDGLHSNPLSSGTVSS-------------IGVGGEFDWNVVNEYDPM 103
Query: 104 RPNDYEDYRREKKKKAVDAEIRRELERRR--QEGEERERR---EREERENASASRLNMSG 158
PN+Y+ +E R+L R QE E R+RR R E S+ M
Sbjct: 104 WPNEYDKVVKE----------LRDLRDREHDQETEMRKRRRDNSRFEDTQTSSGNNTMIP 153
Query: 159 EEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
E + R S G + +PPP ES + +G + A ++
Sbjct: 154 PERDEERTPTSRGIAGGAAIAPPPSLQESSDLP---PSSPRPPTSMGYATS---SVAAKI 207
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKS----------- 267
MAK G+KEGQGLG++EQG++ L KT +R G IV E
Sbjct: 208 MAKYGFKEGQGLGKKEQGMSVALQVEKTSKRGGRIVGEREQLMPPPPPVAASPPPPQQQP 267
Query: 268 -----------VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI 315
P++V+LLRNMVGPGEVDD+LE EV EC KYG V RV+I E+
Sbjct: 268 PPTQPSEEPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHEV 327
Query: 316 TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
TE +EAVRIFV+F+R E KA++DL+GRFFGGR V+A FY E+ +L
Sbjct: 328 TEA--APEEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYSSEKLDSLQL 380
>gi|41055474|ref|NP_957209.1| splicing factor 45 [Danio rerio]
gi|28278930|gb|AAH45473.1| RNA binding motif protein 17 [Danio rerio]
gi|182890562|gb|AAI64722.1| Rbm17 protein [Danio rerio]
Length = 418
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 164/335 (48%), Gaps = 86/335 (25%)
Query: 96 VIEEYDPARPNDYED----YRREKKKKAVDAEIRRELERRRQ------------------ 133
+ +EYDP PNDYE +R E++K+ RE ER+++
Sbjct: 96 LADEYDPMFPNDYEKVLKRHREERQKQ-------REQERQKEIEEREKKRKERHEGGGGG 148
Query: 134 -------------EGEERERREREERENASASRLNMSGEEAWKRRAAMS---SGGVPPRS 177
E +E E ERE+R+ + +R ++ + G ++
Sbjct: 149 GAPSGFSRFPTEGESDEEEDYEREKRKRTAGGAAIAPPTSLVERDSSFTYDEDGRQRTKA 208
Query: 178 PSPPPVNVESG------GGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLG 231
PPPV +S G F GG T A ++M K G++EGQGLG
Sbjct: 209 AIPPPVFEDSDRPRSPPGPANSFLAN----------MGG--TVAHKIMQKYGFREGQGLG 256
Query: 232 RQEQGITTPLMARKTDRRAG-VIVNASENKSEKKVKSV-------------NFNGP---- 273
+ EQG++T L KT +R G +I+ S K+ ++V N P
Sbjct: 257 KHEQGLSTALSVEKTSKRGGKIIIGDSTEKTTGPSQNVANPDGSNSDASKKNETNPLTEI 316
Query: 274 ---PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
PT+V+LLRNMVG GEVD++LE E EC KYG V R +IFEI+ DEAVRIF+
Sbjct: 317 LKCPTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVVRCVIFEIS--GVTDDEAVRIFL 374
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+FER E KA++DL+GR+FGGRVV+A FY+ +RF
Sbjct: 375 EFERVESAIKAVVDLNGRYFGGRVVKACFYNLDRF 409
>gi|198437801|ref|XP_002129262.1| PREDICTED: similar to RNA binding motif protein 17 [Ciona
intestinalis]
Length = 378
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 113/172 (65%), Gaps = 18/172 (10%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKS----- 267
+ A ++MAK G+KEG GLG+ +G++ L KT +R G I+++ + + + + +
Sbjct: 208 SVAHKIMAKYGFKEGLGLGKDNKGMSHALQIEKTSKRGGKIISSEQIEQQLEEEYKKEQQ 267
Query: 268 -----VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE---ITEPN 319
+ PT+V+ LRNMVGPGEVDD+LE E EC+KYG+V + LIFE +TE
Sbjct: 268 EKKSVTDLLKNPTKVICLRNMVGPGEVDDDLEAETKEECSKYGSVNKCLIFEMHGVTE-- 325
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
DEA+RIF++F+R E K+L+D++GRFFGGR V+A+FYD E+F +L+
Sbjct: 326 ---DEAIRIFIEFDRMESAIKSLVDMNGRFFGGRTVKASFYDVEKFKSFQLS 374
>gi|320164853|gb|EFW41752.1| Rbm17 protein [Capsaspora owczarzaki ATCC 30864]
Length = 614
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 117/220 (53%), Gaps = 28/220 (12%)
Query: 153 RLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQM 212
R+ +SGEEA++RR MS G + ++
Sbjct: 422 RIKLSGEEAYQRRLKMSMGST------------------SHSPSSTTTSAPASSATASSG 463
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNG 272
T +RMM KMGWK GQGLG+ EQGI+TPL+ KT + + IV + ++
Sbjct: 464 TVVERMMGKMGWKSGQGLGKDEQGISTPLLVAKTGKTSATIVQQQQQTHQRA-------- 515
Query: 273 PPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 332
T V+LL NMVGPGEVDD+L+ EV E K+G V + L+FE+ D+AVRIF++F
Sbjct: 516 --TLVVLLENMVGPGEVDDDLQAEVTEESEKFGKVKQCLVFEVPNKQVRDDQAVRIFIEF 573
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
+A+ + GRFFGGR VRA+F+ ER K +LAP
Sbjct: 574 ASEVAAVRAVNEFHGRFFGGRQVRASFFPVERMRKFDLAP 613
>gi|194767538|ref|XP_001965872.1| GF15900 [Drosophila ananassae]
gi|190619348|gb|EDV34872.1| GF15900 [Drosophila ananassae]
Length = 401
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 193/424 (45%), Gaps = 84/424 (19%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQN-- 62
LY D+ + KP ++ WSS KM L + Q + KP P +
Sbjct: 3 LYDDI-----DTKPRSSHIDGWSSGIKMLQTQLAVKKA-----QPMKKPLMTPAVSLRIK 52
Query: 63 ---SLPTRPHSSPAIAPSPDDAAALPQPALVGVTST---VIEEYDPARPNDYEDYRR--- 113
P + A+A AL P L V+ ++EYDP PN+YE +
Sbjct: 53 RPAEAELIPFMTNAVAKPIITGTALALPLLHNVSKDDWDFVDEYDPQWPNEYEKLKERSK 112
Query: 114 --EKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSG-------EEAWK- 163
EK + + R ++ RR+ +++ +S + +SG EE +
Sbjct: 113 SVEKTRSSAVGNREDRDRERERKRNRNGRRD-AQKDGSSPPSIKLSGFGLRQSDEERYSP 171
Query: 164 ----RRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMM 219
A + G PS +++ESG G TI S +S A ++M
Sbjct: 172 PLPGSVAKLGGGAAIAPPPSLQEISIESGDGLSNVTIPYSASS-----------VAAKIM 220
Query: 220 AKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNF--------- 270
AK G+K+GQGLG+ EQG++ L KT +R G I++ + + S
Sbjct: 221 AKYGFKDGQGLGKSEQGMSIALQVEKTSKRGGRIIHEKDVFLPPSLMSPPPADSPPGLSP 280
Query: 271 -----------NGP----------PTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVT 308
NGP P++V+LLRNMVGPG+VD+ELE EV EC KYG V
Sbjct: 281 NQQIPMAVPTGNGPEPSITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECHTKYGEVN 340
Query: 309 RVLIFEI--TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
V+I E T P ++AV+IFV+F+R E KA++DL+GRFFGGR VRA FY+ ++F
Sbjct: 341 SVIIHEAFGTAP----EDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRALFYNYDKFK 396
Query: 367 KNEL 370
+L
Sbjct: 397 SFQL 400
>gi|307212516|gb|EFN88247.1| Splicing factor 45 [Harpegnathos saltator]
Length = 383
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 140/416 (33%), Positives = 189/416 (45%), Gaps = 87/416 (20%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTL---------------RKPSSIFAPPQT 49
LY D + T+ WSS K+ L RK S++ AP
Sbjct: 3 LYDDF-----DKHRTSEKVAGWSSGIKLLQSQLQLKKAATTQPKREQYRKASAVLAP--- 54
Query: 50 ILKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTS----TVIEEYDPARP 105
++ +SK + H++P S + +GV S V+ EYDP P
Sbjct: 55 VIDLKSKTNRDLDREDDVTHNNPLSTSSV---------SGIGVGSEFDWNVVNEYDPIWP 105
Query: 106 NDYEDYRREKKKKAVDAEIRRELERRR-QEGEERERRE---REERENASASRLNMSGEEA 161
N+YE V E+R +R QE E R+RR R E AS S M E
Sbjct: 106 NEYE---------KVVKELRDMRDREHDQETEMRKRRRDNTRFEDNQASGSNSTMIPPER 156
Query: 162 WKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIG----KSETSGLGLGAGGQMTAAQR 217
+ R S G + + +PPP ES + +S+ S LG + A +
Sbjct: 157 DEERTPSSRGMIGGAAIAPPPSLQESS------ELPPPSPRSQQSSLGYATS---SVAAK 207
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKS---------- 267
+MAK G+KEGQGLG++EQG++ L KT +R G IV E
Sbjct: 208 IMAKYGFKEGQGLGKKEQGMSVALQVEKTSKRGGRIVGEREQLMPPPPPLTASPPQTQQP 267
Query: 268 ------------VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFE 314
P++V+LLRNMVGPGEVDD+LE EV EC KYG V RV+I E
Sbjct: 268 LVQQQPAEEPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDVARVIIHE 327
Query: 315 ITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+ E +EAVRIFV+F+R E KA++DL+GRFFGGR V+A FY E+ +L
Sbjct: 328 VMEAA--AEEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYSSEKLDNLQL 381
>gi|195433330|ref|XP_002064668.1| GK23713 [Drosophila willistoni]
gi|194160753|gb|EDW75654.1| GK23713 [Drosophila willistoni]
Length = 443
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 205/466 (43%), Gaps = 126/466 (27%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTL--RKPSSIFAPPQTILKPQSKP----- 57
LY D+ + KP + WSS KM L +K + + P + I KP P
Sbjct: 3 LYDDI-----DTKPRASQIDGWSSGIKMLQTQLAVKKAAQLPKPREQIKKPLMTPVVNLR 57
Query: 58 -KTTQNSLPTRPHSSPAIAPSPD---DAAALPQPALVGVT----STVIEEYDPARPNDYE 109
K P P + + ALP PA+ + S ++EYDP PN+YE
Sbjct: 58 AKRAATDAPETAGFPPIVGATTKPIITGTALPPPAMESLKKDDWSDFVDEYDPQWPNEYE 117
Query: 110 DYRR-----EKKKKAVDAEIRRELERRRQEGEERERR-----------------EREERE 147
+ +K + + + E R + + R +ER+ ++R+
Sbjct: 118 KLKEKTKSSDKSRNSGNKE-HRSINKDRDGPQERDHDRKRNRGSGGRGGGGGRDNHKDRD 176
Query: 148 NASASRLNMSGEEAWKRRAAMSSGGVPPR-----------SPSPPP----VNVESGGGGG 192
N S + SG + +R + PP + +PPP +++++G G
Sbjct: 177 NNSPPSVKFSG---FSQRQSEEDRYSPPAPGSMAKQGGGAAIAPPPSLQEISIDNGDGSS 233
Query: 193 GFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGV 252
TI S +S A ++MAK G+K+GQGLG+ EQG++ L KT +R G
Sbjct: 234 NVTIPYSASS-----------VAAKIMAKYGFKDGQGLGKSEQGMSVALQVEKTSKRGGR 282
Query: 253 IVNA---------------------------------------------SENKSEKKVKS 267
I++ S N+ E +
Sbjct: 283 IIHEKDVFLPPAPLGGGTPSSSSSPPMLAPPSPSHNAMPPPSFPGLAPPSANEPEPSITE 342
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEPNFPVDE 324
+ + P++V+LLRNMVGPG+VD+ELE EV EC KYG V V+I E T P ++
Sbjct: 343 IMKD--PSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHEAFGTTP----ED 396
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
AV+IFV+F+R E KA++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 397 AVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFYNFDKFKSFQL 442
>gi|193613005|ref|XP_001950928.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
gi|193629687|ref|XP_001945492.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
Length = 404
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 130/224 (58%), Gaps = 36/224 (16%)
Query: 173 VPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGR 232
+P + +PPP ES + G ++SG+G+G G A ++MAK G+KEGQGLG+
Sbjct: 189 IPGAAIAPPPSLQESFVS----SPGPQQSSGIGMGMG----VAAKIMAKYGFKEGQGLGK 240
Query: 233 QEQGITTPLMARKTDRRAGVIVN------------------------ASENKSEKKVKSV 268
+EQGI+ L KT +R G I++ A K ++S+
Sbjct: 241 KEQGISVALQVEKTSKRGGRIIHEKPGGNVSPPPMTPMAAVIQDDFVAPAPPPPKPLQSI 300
Query: 269 N-FNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAV 326
++V+LLRNMVGPGEVD +LE EV EC KYG V +V+I+E+ PN +EAV
Sbjct: 301 TEIMKEQSKVVLLRNMVGPGEVDQDLEPEVKDECNTKYGDVNKVVIYEV--PNVDHEEAV 358
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
RIFV+F+R E KA++DL+GRFFGGR V+A FY E+ + +L
Sbjct: 359 RIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYSAEKLNSYQL 402
>gi|443690684|gb|ELT92746.1| hypothetical protein CAPTEDRAFT_28435, partial [Capitella teleta]
Length = 194
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 113/186 (60%), Gaps = 31/186 (16%)
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVN---------ASENKSEK- 263
A ++MAKMG+++G GLG+ EQG++T L KT +R G I++ A +E
Sbjct: 11 VASKIMAKMGYRQGSGLGKSEQGMSTALQVEKTSKRGGKIIHEKDIPKGTYAVRIFTEMP 70
Query: 264 --KVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
+V + N P++V+LLRNMVGPGEVDD+LE E ECAKYG V + +IFEI P
Sbjct: 71 RPEVSNANLLKNPSKVILLRNMVGPGEVDDDLEPETAEECAKYGKVIKCVIFEI--PGVV 128
Query: 322 VDEAVRIFVQFERSEQTTK-----------------ALIDLDGRFFGGRVVRATFYDEER 364
+EAVRIF+QFER E K A++DL+GRFFGGR V+A FY+ ++
Sbjct: 129 EEEAVRIFLQFERMEAAIKGILMLFLYFLCSNSLLSAVVDLNGRFFGGRAVKAGFYNVDK 188
Query: 365 FSKNEL 370
F + +L
Sbjct: 189 FRQLDL 194
>gi|147906402|ref|NP_001089093.1| RNA binding motif protein 17 [Xenopus laevis]
gi|112419030|gb|AAI22486.1| LOC733282 protein [Xenopus laevis]
Length = 400
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 163/329 (49%), Gaps = 73/329 (22%)
Query: 92 VTSTVIEEYDPARPNDYE-------------------------DYRREKKKKAVDAEIRR 126
V + +EYDP PNDYE + RR+ + +A R
Sbjct: 93 VLVPLADEYDPMYPNDYEKIVKRQREERQRQRELERQKEIEDREKRRKDRHEASGFSRRP 152
Query: 127 ELERRRQEGEERERREREERENASASRLNM----------SGEEAWKRRAAMSSGGVPP- 175
+ E +E ERE+R+R A A ++ + ++ + R M +PP
Sbjct: 153 DPESDEEEDYEREKRKRPMGGAAIAPPTSLMEKDRESIVPAYDDEPRPRPPMGKAAIPPP 212
Query: 176 --------RSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEG 227
RSP+ P + + GG T A ++M K G++EG
Sbjct: 213 MYDEPERPRSPTGPSNSFLANMGG---------------------TVAHKIMQKYGFREG 251
Query: 228 QGLGRQEQGITTPLMARKTDRRAG-VIVNASENKSEKKVKS-----VNFNGPPTRVLLLR 281
QGLG+ EQG++T L KT +R G +IV +K E K+ PT+V+LL+
Sbjct: 252 QGLGKHEQGLSTALSVEKTSKRGGKIIVGDLADKVEAAKKADPNPLTEILKTPTKVVLLQ 311
Query: 282 NMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKA 341
NMVG GEVD+ELE E EC KYG V + +IFEI P P +EAVRIF++FER E KA
Sbjct: 312 NMVGAGEVDEELEGETKEECEKYGKVAKCVIFEI--PGAPDEEAVRIFLEFERVESAIKA 369
Query: 342 LIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++DL+GR+FGGR+V+A FY+ ++F +L
Sbjct: 370 VVDLNGRYFGGRIVKAGFYNLDKFRTLDL 398
>gi|410919059|ref|XP_003973002.1| PREDICTED: splicing factor 45-like isoform 1 [Takifugu rubripes]
Length = 403
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 192/403 (47%), Gaps = 76/403 (18%)
Query: 19 TNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSLPTRPHSSPAIAPSP 78
++T T WS + K+ L+ + Q+K + + + P S
Sbjct: 12 SDTKTEGWSKNFKLLQSQLKVKKAALT--------QAKTQRVKQTTVLAPVIDLKRGGSS 63
Query: 79 DD--AAALPQPALVGVTSTV-------------IEEYDPARPNDYEDYRREKKKKAVDAE 123
DD + +P A G+ TV +EYDP P+DYE K+ +
Sbjct: 64 DDRQISEMPPHAAAGMKDTVPSGFSSSDVLIPLADEYDPMFPHDYEKVM----KRHREER 119
Query: 124 IRRELERRRQEGEERERREREERENASASRLNM---------SGEEAWKRRAAMSSGGVP 174
R+ + R++E EERE++ ++ E + S + E+ K R S GG
Sbjct: 120 QRQREQERQKEIEEREKKRKDRHEGGAPSGFSRFPAAEGDSDEDEDYEKERRKRSMGG-- 177
Query: 175 PRSPSPPPVNVESGGGGGGFTIGKSE---------------------------TSGLGLG 207
+ PP ++ G F+ TS
Sbjct: 178 --AAIAPPSSLVDREGPSSFSYEDEAPSTRGAKAAIPPPMFEDPDRPRSPPGPTSSFLAN 235
Query: 208 AGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKSEKKV 265
GG T A ++M K G+KEGQGLG+ EQG++T L KT +R G I+ +A+E KK
Sbjct: 236 MGG--TVAHKIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDAAEKPDGKKS 293
Query: 266 KS---VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPV 322
++ PT+V+LLRNMVG GEVD++LE+E EC KYG V + +IFEI E P
Sbjct: 294 EANPLTEILKNPTKVVLLRNMVGRGEVDEDLEEETKEECEKYGKVVKCVIFEIAE--VPD 351
Query: 323 DEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F
Sbjct: 352 DEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKF 394
>gi|195355939|ref|XP_002044442.1| GM11754 [Drosophila sechellia]
gi|194130810|gb|EDW52853.1| GM11754 [Drosophila sechellia]
Length = 400
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 183/403 (45%), Gaps = 80/403 (19%)
Query: 26 WSSSAKMAPPTLRKPSSIFAPPQT-ILKPQSK----PKTTQNSLPTRPHSSPAIAPSPDD 80
WSS KM L ++ P T ++ +SK P+ T + T S P I+
Sbjct: 19 WSSGIKMLQTQLALKMAVKKPLMTPVVNLRSKRLAEPEVTCFAPITTVLSKPLIS----- 73
Query: 81 AAALPQPALVGVTS---TVIEEYDPARPNDYEDYRREK------KKKAVDAEIRRELERR 131
ALP L + S V +EYDP PN+YE + + + D E R + E+
Sbjct: 74 GKALPS-ILESINSGGWDVTDEYDPQWPNEYEKLKEKSNGSDNIRAGVSDREDREDKEKD 132
Query: 132 RQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGG 191
R+ G R R RE S L +SG + A PSP PV +
Sbjct: 133 RKRG--RVGRREVYREEVSGQNLKLSGFGQRQNNADT-------YLPSPGPVAKQ----- 178
Query: 192 GGFTIGKS-ETSGLGLGAGGQMT---------AAQRMMAKMGWKEGQGLGRQEQGITTPL 241
GG TI + + +G + T A ++MAK G+K+GQGLG+ EQG+ L
Sbjct: 179 GGATIAPPPSLQEISIDSGCEATNTMPYSASSVAAKIMAKYGFKDGQGLGKSEQGMAMAL 238
Query: 242 MARKTDRRAGVIVNASE---------------------------------NKSEKKVKSV 268
KT +R G I++ + SE
Sbjct: 239 QVEKTSKRGGRIIHEKDVFLPPLALSPPAICSQIGTSPSHKAMPPPQMVGTASESGDSIT 298
Query: 269 NFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVR 327
P++V+LLRNMVGPG+VD+ELE EV EC KYG V V+I E + P D AV+
Sbjct: 299 EIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE-SFGTVPED-AVK 356
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
IFV+F R E KA++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 357 IFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKCFQL 399
>gi|443689872|gb|ELT92163.1| hypothetical protein CAPTEDRAFT_67241, partial [Capitella teleta]
Length = 185
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 110/185 (59%), Gaps = 33/185 (17%)
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVN--------------ASENKSEK 263
+MAKMG+++G GLG+ EQG++T L KT +R G I++ A
Sbjct: 1 IMAKMGYRQGSGLGKSEQGMSTALQVEKTSKRGGKIIHEKDIPKGTYAVRICAVTEMPRP 60
Query: 264 KVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVD 323
+V + N P++V+LLRNMVGPGEVDD+LE E ECAKYG V + +IFEI P +
Sbjct: 61 EVSNANLLKNPSKVILLRNMVGPGEVDDDLEPETAEECAKYGKVIKCVIFEI--PGVVEE 118
Query: 324 EAVRIFVQFERSEQTTK-----------------ALIDLDGRFFGGRVVRATFYDEERFS 366
EAVRIF+QFER E K A++DL+GRFFGGR V+A FY+ ++F
Sbjct: 119 EAVRIFLQFERMEAAIKGILMLFLYFLCSNSLLSAVVDLNGRFFGGRAVKAGFYNVDKFR 178
Query: 367 KNELA 371
+ +LA
Sbjct: 179 QLDLA 183
>gi|428166464|gb|EKX35439.1| hypothetical protein GUITHDRAFT_155487 [Guillardia theta CCMP2712]
Length = 150
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 100/154 (64%), Gaps = 11/154 (7%)
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVL 278
M +MGW+EG+GLG Q QGIT L A KT + G IV+ + G P+R +
Sbjct: 1 MKRMGWEEGKGLGAQSQGITAALQAHKTGNKTGRIVSNELGQL----------GAPSRCV 50
Query: 279 LLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQT 338
LL NMVG GEVD+ LE+E EC+KYG ++R +I E+ P P D+AVRIF+ F + E
Sbjct: 51 LLTNMVGAGEVDERLEEETKQECSKYGFISRCVIHELP-PGAPEDQAVRIFLLFGKQESA 109
Query: 339 TKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
KA++DLDGRFFGGR VRA+F+ E+ F+ +L P
Sbjct: 110 MKAVMDLDGRFFGGRQVRASFFGEDDFANKKLDP 143
>gi|157115517|ref|XP_001658243.1| hypothetical protein AaeL_AAEL007239 [Aedes aegypti]
gi|108876860|gb|EAT41085.1| AAEL007239-PA [Aedes aegypti]
Length = 419
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 111/193 (57%), Gaps = 30/193 (15%)
Query: 206 LGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE------- 258
L A G + A ++MAK G+++GQGLG+QEQG++ L KT +R G IV+ +
Sbjct: 227 LTAYGGSSVAAKIMAKYGFRDGQGLGKQEQGMSMALQVEKTSKRGGRIVHEKDISMPPPG 286
Query: 259 --------------------NKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVG 298
+ + P++V+LLRNMVGPG+VDDELE EV
Sbjct: 287 EVPAAATAGAAPAAASTSQASSFASEPSITEIMKSPSKVVLLRNMVGPGDVDDELEPEVK 346
Query: 299 SEC-AKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
EC KYG V V+I EI P +E VRIFV+F+R E KA++DL+GRFFGGR VRA
Sbjct: 347 DECNTKYGDVITVVIHEI--PKVVPEETVRIFVEFKRMESAIKAVVDLNGRFFGGRQVRA 404
Query: 358 TFYDEERFSKNEL 370
FY++ERF +L
Sbjct: 405 GFYNQERFDSMDL 417
>gi|339252298|ref|XP_003371372.1| splicing factor 45 [Trichinella spiralis]
gi|316968403|gb|EFV52683.1| splicing factor 45 [Trichinella spiralis]
Length = 417
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 150/300 (50%), Gaps = 50/300 (16%)
Query: 96 VIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASAS--- 152
V +EYDP PN++ + R+ R + + RR E+ N S+S
Sbjct: 142 VEDEYDPNHPNEF-----------ANLVTFRDNARSKFGCQSYTRRSGVEKTNYSSSGDE 190
Query: 153 ---------RLNMSGE--EAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSET 201
+ N E E W+ S+G + +PPP +E + +SET
Sbjct: 191 VGEEEKPIGKWNSLCERPERWR-----STGA----AIAPPPELIEQDKQTA---VSESET 238
Query: 202 SGLGL--------GAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVI 253
S + + A R+M + G+K+G GLGR EQG++T L K R G I
Sbjct: 239 SDSSFMPPPPPPTASARGLDFAARIMERYGYKQGSGLGRDEQGMSTALQVEKVGTRHGKI 298
Query: 254 VNASENKSEKKVKSVNFNGP---PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRV 310
++ S + + VN PT+V+LLRNMVG GEVD EL+ EV E KYG V R
Sbjct: 299 IHESSSAATASTTEVNVTDELRNPTKVMLLRNMVGAGEVDSELQPEVQDEMLKYGEVRRC 358
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++ E+ PN +AVRIFV+F R EQ KA++ L+GRFF GR V A+FYD E+F++ EL
Sbjct: 359 MVVEV--PNASDVDAVRIFVEFARVEQAIKAVVALNGRFFAGRSVMASFYDPEKFARLEL 416
>gi|297596920|ref|NP_001043226.2| Os01g0526100 [Oryza sativa Japonica Group]
gi|125570651|gb|EAZ12166.1| hypothetical protein OsJ_02049 [Oryza sativa Japonica Group]
gi|255673308|dbj|BAF05140.2| Os01g0526100 [Oryza sativa Japonica Group]
Length = 108
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/97 (77%), Positives = 89/97 (91%)
Query: 284 VGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALI 343
VGPGEVDDELE+EV SEC+KYGTV RVLIFEIT+ +FP +EAVRIF+ FER+E+ TKA+I
Sbjct: 11 VGPGEVDDELEEEVASECSKYGTVLRVLIFEITQADFPAEEAVRIFILFERAEEATKAMI 70
Query: 344 DLDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 380
DL+GRFFGGRVVRATF+DEERF KN+LAP+PGE+ GF
Sbjct: 71 DLEGRFFGGRVVRATFFDEERFGKNQLAPMPGEVAGF 107
>gi|67678022|gb|AAH97900.1| LOC733282 protein [Xenopus laevis]
Length = 281
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 110/164 (67%), Gaps = 8/164 (4%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAG-VIVNASENKSEKKVKS---- 267
T A ++M K G++EGQGLG+ EQG++T L KT +R G +IV +K E K+
Sbjct: 118 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDLADKVEAAKKADPNP 177
Query: 268 -VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
PT+V+LL+NMVG GEVD+ELE E EC KYG V + +IFEI P P +EAV
Sbjct: 178 LTEILKTPTKVVLLQNMVGAGEVDEELEGETKEECEKYGKVAKCVIFEI--PGAPDEEAV 235
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
RIF++FER E KA++DL+GR+FGGR+V+A FY+ ++F +L
Sbjct: 236 RIFLEFERVESAIKAVVDLNGRYFGGRIVKAGFYNLDKFRTLDL 279
>gi|195552366|ref|XP_002076446.1| GD17712 [Drosophila simulans]
gi|194201699|gb|EDX15275.1| GD17712 [Drosophila simulans]
Length = 403
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 186/406 (45%), Gaps = 83/406 (20%)
Query: 26 WSSSAKMAPPTLRKPSSIFAPPQT-ILKPQSK----PKTTQNSLPTRPHSSPAIAPSPDD 80
WSS KM L ++ P T ++ +SK P+ T + T S P I+
Sbjct: 19 WSSGIKMLQTQLAVKMAVKKPLMTPVVNLRSKRLAEPEVTCFAPITTVLSKPLIS----- 73
Query: 81 AAALPQPALVGVTS---TVIEEYDPARPNDYEDYRREK------KKKAVDAEIRRELERR 131
ALP L + S V +EYDP PN+YE + + + D E R + E+
Sbjct: 74 GKALPS-ILESINSGGWDVTDEYDPQWPNEYEKLKEKSNGSDNIRAGVSDREDREDKEKD 132
Query: 132 RQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGG 191
R+ G R R R+ S L +SG + A PSP PV +
Sbjct: 133 RKRG--RVGRREVYRDEVSGQNLKLSGFGQRQNDADT-------YLPSPGPVAKQ----- 178
Query: 192 GGFTIG-----KSETSGLGLGAGGQM-----TAAQRMMAKMGWKEGQGLGRQEQGITTPL 241
GG TI + + G A M + A ++MAK G+K+GQGLG+ EQG+ L
Sbjct: 179 GGATIAPPPSLQEMSIDSGCEATNTMPYSASSVAAKIMAKYGFKDGQGLGKSEQGMAMAL 238
Query: 242 MARKTDRRAGVIVNASE-------------------NKSEKKVKSVNFNG---------- 272
KT +R G I++ + + S K + G
Sbjct: 239 QVEKTSKRGGRIIHEKDVFLPPLALSPPAICSQIGTSPSHKAMPPPQMVGTASESGDIGY 298
Query: 273 -------PPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDE 324
P++V+LLRNMVGPG+VD+ELE EV EC KYG V V+I E + P D
Sbjct: 299 SITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE-SFGTVPED- 356
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
AV+IFV+F R E KA++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 357 AVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKCFQL 402
>gi|322800820|gb|EFZ21695.1| hypothetical protein SINV_12429 [Solenopsis invicta]
Length = 242
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 108/183 (59%), Gaps = 27/183 (14%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASEN------------- 259
+ A ++MAK G+KEGQGLG++EQG++ L KT +R G IV E
Sbjct: 60 SVAAKIMAKYGFKEGQGLGKKEQGMSVALQVEKTSKRGGRIVGEREQLMPPPPPLTASPP 119
Query: 260 -----------KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTV 307
+ +++ P++V+LLRNMVGPGEVDD+LE EV EC KYG V
Sbjct: 120 QMQLQVLSQSQQPQEEPSITEIMKCPSKVVLLRNMVGPGEVDDDLEPEVKDECNTKYGDV 179
Query: 308 TRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
RV+I E+ E +EAVRIFV+F+R E KA++DL+GRFFGGR V+A FY E+
Sbjct: 180 ARVIIHEVIEAT--PEEAVRIFVEFKRIESAIKAVVDLNGRFFGGRQVKAGFYSSEKLDN 237
Query: 368 NEL 370
+L
Sbjct: 238 LQL 240
>gi|116007458|ref|NP_001036425.1| Spf45, isoform B [Drosophila melanogaster]
gi|46409150|gb|AAS93732.1| RE44883p [Drosophila melanogaster]
gi|51951006|gb|EAA46010.2| Spf45, isoform B [Drosophila melanogaster]
gi|220951092|gb|ACL88089.1| Spf45-PB [synthetic construct]
gi|220959676|gb|ACL92381.1| Spf45-PB [synthetic construct]
Length = 371
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 162/330 (49%), Gaps = 73/330 (22%)
Query: 96 VIEEYDPARPNDYEDYRR-----EKKKKAV-DAEIRRELERRRQEGEERERREREERENA 149
V +EYDP RPN+YE + +K + V D E R + E+ R+ G R R R+
Sbjct: 59 VADEYDPQRPNEYEKLKEKSNGSDKNRAGVSDREDRDDKEKDRKRG--RVGRREFYRDEV 116
Query: 150 SASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIG-----KSETSGL 204
SA L +SG + M PSP V + GG TI + +
Sbjct: 117 SAPNLKLSGFGHRQNDDDM-------YLPSPGLVAKQ-----GGATIAPPPSLQEMSIDS 164
Query: 205 GLGAGGQM-----TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE- 258
G A M + A ++MAK G+K+GQGLG+ EQG+ L KT +R G I++ +
Sbjct: 165 GCEATNTMPYSASSVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDV 224
Query: 259 ------------------NKSEKK------VKSVNFNG-----------PPTRVLLLRNM 283
+ S K V + +G P++V+LLRNM
Sbjct: 225 FLPPLALSPPSIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSITEIMKSPSKVVLLRNM 284
Query: 284 VGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEPNFPVDEAVRIFVQFERSEQTTK 340
VGPG+VD+ELE EV EC KYG V V+I E T P ++AV+IFV+F R E K
Sbjct: 285 VGPGDVDEELEPEVKDECNTKYGEVNSVIIHESFGTVP----EDAVKIFVEFRRIESAIK 340
Query: 341 ALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
A++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 341 AVVDLNGRFFGGRQVRAGFYNYDKFKCFQL 370
>gi|116007460|ref|NP_001036426.1| Spf45, isoform A [Drosophila melanogaster]
gi|30923530|gb|EAA46008.1| Spf45, isoform A [Drosophila melanogaster]
gi|83270221|gb|ABB99954.1| RNA binding motif protein 17 [Drosophila melanogaster]
gi|201065519|gb|ACH92169.1| FI02801p [Drosophila melanogaster]
Length = 403
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 188/402 (46%), Gaps = 75/402 (18%)
Query: 26 WSSSAKMAPPTLRKPSSIFAPPQT-ILKPQSK----PKTTQNSLPTRPHSSPAIAPSPDD 80
WSS KM L ++ P T ++ +SK P+ T + T S P I+
Sbjct: 19 WSSGIKMLQTQLAVKMAVKKPLMTPVVNLRSKRLADPEVTCFAPITTVVSKPLIS----- 73
Query: 81 AAALPQPALVGVTS---TVIEEYDPARPNDYEDYRR-----EKKKKAV-DAEIRRELERR 131
ALP L + V +EYDP RPN+YE + +K + V D E R + E+
Sbjct: 74 GKALPS-ILERINRGDWDVADEYDPQRPNEYEKLKEKSNGSDKNRAGVSDREDRDDKEKD 132
Query: 132 RQEGEERERREREERENASASRLNMSGEEAWKRRAAM---SSGGVPPR---SPSPPPVNV 185
R+ G R R R+ SA L +SG + M S G V + + +PPP
Sbjct: 133 RKRG--RVGRREFYRDEVSAPNLKLSGFGHRQNDDDMYLPSPGLVAKQGGATIAPPPSLQ 190
Query: 186 ESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARK 245
E G T+ + A + A ++MAK G+K+GQGLG+ EQG+ L K
Sbjct: 191 EMS-----IDSGCEATNTMPYSAS---SVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEK 242
Query: 246 TDRRAGVIVNASE-------------------NKSEKKV-----------------KSVN 269
T +R G I++ + + S K +
Sbjct: 243 TSKRGGRIIHEKDVFLPPLALSPPSIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSITE 302
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
P++V+LLRNMVGPG+VD+ELE EV EC KYG V V+I E + P D AV+I
Sbjct: 303 IMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE-SFGTVPED-AVKI 360
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
FV+F R E KA++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 361 FVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKCFQL 402
>gi|17946228|gb|AAL49154.1| RE57542p [Drosophila melanogaster]
gi|220948600|gb|ACL86843.1| Spf45-PC [synthetic construct]
gi|220958036|gb|ACL91561.1| Spf45-PC [synthetic construct]
Length = 379
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 164/330 (49%), Gaps = 73/330 (22%)
Query: 96 VIEEYDPARPNDYEDYRR-----EKKKKAV-DAEIRRELERRRQEGEERERREREERENA 149
V +EYDP RPN+YE + +K + V D E R + E+ R+ G R R R+
Sbjct: 67 VADEYDPQRPNEYEKLKEKSNGSDKNRAGVSDREDRDDKEKDRKRG--RVGRREFYRDEV 124
Query: 150 SASRLNMSGEEAWKRRAAM---SSGGVPPR---SPSPPP----VNVESGGGGGGFTIGKS 199
SA L +SG + M S G V + + +PPP ++++SG
Sbjct: 125 SAPNLKLSGFGHRQNDDDMYLPSPGLVAKQGGATIAPPPSLQEMSIDSGC---------E 175
Query: 200 ETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE- 258
T+ + A + A ++MAK G+K+GQGLG+ EQG+ L KT +R G I++ +
Sbjct: 176 ATNTMPYSAS---SVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDV 232
Query: 259 ------------------NKSEKKV-----------------KSVNFNGPPTRVLLLRNM 283
+ S K + P++V+LLRNM
Sbjct: 233 FLPPLALSPPSIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSITEIMKSPSKVVLLRNM 292
Query: 284 VGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEPNFPVDEAVRIFVQFERSEQTTK 340
VGPG+VD+ELE EV EC KYG V V+I E T P ++AV+IFV+F R E K
Sbjct: 293 VGPGDVDEELEPEVKDECNTKYGEVNSVIIHESFGTVP----EDAVKIFVEFRRIESAIK 348
Query: 341 ALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
A++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 349 AVVDLNGRFFGGRQVRAGFYNYDKFKCFQL 378
>gi|46409234|gb|AAS93774.1| AT25717p [Drosophila melanogaster]
Length = 363
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 160/326 (49%), Gaps = 65/326 (19%)
Query: 96 VIEEYDPARPNDYEDYRR-----EKKKKAV-DAEIRRELERRRQEGEERERREREERENA 149
V +EYDP RPN+YE + +K + V D E R + E+ R+ G R R R+
Sbjct: 51 VADEYDPQRPNEYEKLKEKSNGSDKNRAGVSDREDRDDKEKDRKRG--RVGRREFYRDEV 108
Query: 150 SASRLNMSGEEAWKRRAAM---SSGGVPPR---SPSPPPVNVESGGGGGGFTIGKSETSG 203
SA L +SG + M S G V + + +PPP E G T+
Sbjct: 109 SAPNLKLSGFGQRQNDDDMYLPSPGLVAKQGGATIAPPPSLQEMS-----IDSGCEATNT 163
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE----- 258
+ A + A ++MAK G+K+GQGLG+ EQG+ L KT +R G I++ +
Sbjct: 164 MPYSAS---SVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDVFLPP 220
Query: 259 --------------NKSEKKV-----------------KSVNFNGPPTRVLLLRNMVGPG 287
+ S K + P++V+LLRNMVGPG
Sbjct: 221 LALSPPAIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSITEIMKSPSKVVLLRNMVGPG 280
Query: 288 EVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEPNFPVDEAVRIFVQFERSEQTTKALID 344
+VD+ELE EV EC KYG V V+I E T P ++AV+IFV+F R E KA++D
Sbjct: 281 DVDEELEPEVKDECNTKYGEVNSVIIHESFGTVP----EDAVKIFVEFRRIESAIKAVVD 336
Query: 345 LDGRFFGGRVVRATFYDEERFSKNEL 370
L+GRFFGGR VRA FY+ ++F +L
Sbjct: 337 LNGRFFGGRQVRAGFYNYDKFKCFQL 362
>gi|116007456|ref|NP_001036424.1| Spf45, isoform C [Drosophila melanogaster]
gi|51951005|gb|EAA46009.2| Spf45, isoform C [Drosophila melanogaster]
Length = 363
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 160/326 (49%), Gaps = 65/326 (19%)
Query: 96 VIEEYDPARPNDYEDYRR-----EKKKKAV-DAEIRRELERRRQEGEERERREREERENA 149
V +EYDP RPN+YE + +K + V D E R + E+ R+ G R R R+
Sbjct: 51 VADEYDPQRPNEYEKLKEKSNGSDKNRAGVSDREDRDDKEKDRKRG--RVGRREFYRDEV 108
Query: 150 SASRLNMSGEEAWKRRAAM---SSGGVPPR---SPSPPPVNVESGGGGGGFTIGKSETSG 203
SA L +SG + M S G V + + +PPP E G T+
Sbjct: 109 SAPNLKLSGFGHRQNDDDMYLPSPGLVAKQGGATIAPPPSLQEMS-----IDSGCEATNT 163
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE----- 258
+ A + A ++MAK G+K+GQGLG+ EQG+ L KT +R G I++ +
Sbjct: 164 MPYSAS---SVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDVFLPP 220
Query: 259 --------------NKSEKKV-----------------KSVNFNGPPTRVLLLRNMVGPG 287
+ S K + P++V+LLRNMVGPG
Sbjct: 221 LALSPPSIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSITEIMKSPSKVVLLRNMVGPG 280
Query: 288 EVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEPNFPVDEAVRIFVQFERSEQTTKALID 344
+VD+ELE EV EC KYG V V+I E T P ++AV+IFV+F R E KA++D
Sbjct: 281 DVDEELEPEVKDECNTKYGEVNSVIIHESFGTVP----EDAVKIFVEFRRIESAIKAVVD 336
Query: 345 LDGRFFGGRVVRATFYDEERFSKNEL 370
L+GRFFGGR VRA FY+ ++F +L
Sbjct: 337 LNGRFFGGRQVRAGFYNYDKFKCFQL 362
>gi|194877371|ref|XP_001973867.1| GG21408 [Drosophila erecta]
gi|190657054|gb|EDV54267.1| GG21408 [Drosophila erecta]
Length = 406
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 186/402 (46%), Gaps = 72/402 (17%)
Query: 26 WSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALP 85
WSS KM L ++ P T + + + + ++ + ALP
Sbjct: 19 WSSGIKMLQTQLAVKMAVKKPLMTPVVNLRAKRLADPEVTCLAPMTTVVSKTLLTGKALP 78
Query: 86 QPALVGVTS---TVIEEYDPARPNDYEDYRR-----EKKKKAVDAEIRRELERRRQEGEE 137
P L V + V +EYDP PN+YE + +K + VD R + + +++ +
Sbjct: 79 -PILERVNNGDWDVTDEYDPQWPNEYEKLKEKTNGSDKTRSFVDGCDREDRDNDKEKDRK 137
Query: 138 RERREREE--RENASASRLNMSGEEAWKRRAAM---SSGGVPPR---SPSPPP----VNV 185
R R R E R++ A L SG + + S+G V + + +PPP +++
Sbjct: 138 RGRVGRREVHRDDVLAPNLKFSGFGQRQNDDDIYLPSAGSVAKQGGATIAPPPSLQEISI 197
Query: 186 ESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARK 245
+SG T+ S +S A ++MAK G+K+GQGLG+ EQG+ L K
Sbjct: 198 DSGCEVSN-TMPYSASS-----------VAAKIMAKYGFKDGQGLGKSEQGMAIALQVEK 245
Query: 246 TDRRAGVIVNASEN------------------------------------KSEKKVKSVN 269
T +R G I++ ++ E
Sbjct: 246 TSKRGGRIIHEKDSFLPPLALSPPSMGFQIGPSPSHKAMLLPQVAGKAAESGETGSSITE 305
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
P++V+LLRNMVGPG+VD+ELE EV EC KYG V V+I E + P D AV+I
Sbjct: 306 IMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHE-SFGTVPED-AVKI 363
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
FV+F R E KA++DL+GRFFGGR VRA FY+ ++F + +L
Sbjct: 364 FVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKRFQL 405
>gi|47218242|emb|CAF96279.1| unnamed protein product [Tetraodon nigroviridis]
Length = 420
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 189/420 (45%), Gaps = 93/420 (22%)
Query: 19 TNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSLPTRPHSSPAIAPSP 78
++T T WS + K+ L+ + Q+K + + + P S
Sbjct: 12 SDTKTEGWSKNFKLLQSQLKVKKAALT--------QAKTQRVKQTTVLAPVIDLKRGGSS 63
Query: 79 DD--AAALPQPALVGVTSTV-------------IEEYDPARPNDYEDYRREKKKKAVDAE 123
DD A +P A G+ TV +EYDP PNDYE K+ +
Sbjct: 64 DDRQIADMPPHAAAGLKDTVPSGFSSSEVLIPLADEYDPMFPNDYEKVM----KRHREER 119
Query: 124 IRRELERRRQEGEERERREREERENASASRLNM---------SGEEAWKRRAAMSSGGVP 174
R+ + R++E EERE++ ++ E + S + E+ K R + GG
Sbjct: 120 QRQREQERQKEIEEREKKRKDRHEGGAPSGFSRFPAAEGDSDEDEDYEKERRKRNMGG-- 177
Query: 175 PRSPSPPPVNVESGGGGGGFTIGKSE---------------------------TSGLGLG 207
+ PP ++ G F+ TS
Sbjct: 178 --AAIAPPSSLVDREGPSSFSYDDEAPSARGPKAAIPPPMFEDPDRPRSPPGPTSSFLAN 235
Query: 208 AGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV------------- 254
GG T A ++M K G++EGQGLG+ EQG++T L KT +R G I+
Sbjct: 236 MGG--TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGEAVEKQGPGQP 293
Query: 255 ---------NASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYG 305
A++ K + PT+V+LLRNMVG GEVD++LE+E EC KYG
Sbjct: 294 GAADPSVGGAAADAKKSEANPLTEILKNPTKVVLLRNMVGRGEVDEDLEEETKEECEKYG 353
Query: 306 TVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V + +IFEI E P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F
Sbjct: 354 KVVKCVIFEIAE--VPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKF 411
>gi|198473430|ref|XP_002133257.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
gi|198139453|gb|EDY70659.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 167/352 (47%), Gaps = 79/352 (22%)
Query: 83 ALPQPALVGVTST---VIEEYDPARPNDYEDYRREKKKK-----------AVDAEIRREL 128
ALP P L + ++EYDP PN+YE + + K R+
Sbjct: 81 ALPPPVLECIKKDDWDFVDEYDPQWPNEYEKLKEKTKNSEKSRNSGVGGAGGCGREDRDR 140
Query: 129 ERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPP----------RSP 178
+R R R R R++AS S +M +R++ PP +
Sbjct: 141 DRDRDRKRGRSGRRENHRDDASRSPPSMKFSGFGQRQSDEDKYSPPPPGSVAKQGGGAAI 200
Query: 179 SPPP----VNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQE 234
+PPP +++++G G TI S +S A ++MAK G+K+GQGLG+ E
Sbjct: 201 APPPSLQEISIDNGDGSSNVTIPYSASS-----------VAAKIMAKYGFKDGQGLGKSE 249
Query: 235 QGITTPLMARKTDRRAGVIVN--------------------------------ASENKSE 262
QG++ L KT +R G I++ + +
Sbjct: 250 QGMSMALQVEKTSKRGGRIIHEKDVFVTPPSTSPPSASSPGHLAMPPPQLPMAVTAPAAT 309
Query: 263 KKVKSVN-FNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEP 318
+ V S+ P++V+LLRNMVGPG+VD+ELE EV EC KYG V V+I E T P
Sbjct: 310 EPVPSITEIMKDPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHEAFGTSP 369
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++AV+IFV+F+R E KA++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 370 ----EDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFYNFDKFKSFQL 417
>gi|195164546|ref|XP_002023107.1| GL21138 [Drosophila persimilis]
gi|194105192|gb|EDW27235.1| GL21138 [Drosophila persimilis]
Length = 418
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 167/352 (47%), Gaps = 79/352 (22%)
Query: 83 ALPQPALVGVTST---VIEEYDPARPNDYEDYRREKKKK-----------AVDAEIRREL 128
ALP P L + ++EYDP PN+YE + + K R+
Sbjct: 81 ALPPPVLECIKKDDWDFVDEYDPQWPNEYEKLKEKTKNSEKSRNSGAGGAGGCGREDRDR 140
Query: 129 ERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPP----------RSP 178
+R R R R R++AS S +M +R++ PP +
Sbjct: 141 DRDRDRKRGRSGRRENHRDDASRSPPSMKFSGFGQRQSDEDKYSPPPPGSVAKQGGGAAI 200
Query: 179 SPPP----VNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQE 234
+PPP +++++G G TI S +S A ++MAK G+K+GQGLG+ E
Sbjct: 201 APPPSLQEISIDNGDGSSNVTIPYSASS-----------VAAKIMAKYGFKDGQGLGKSE 249
Query: 235 QGITTPLMARKTDRRAGVIVN--------------------------------ASENKSE 262
QG++ L KT +R G I++ + +
Sbjct: 250 QGMSMALQVEKTSKRGGRIIHEKDVFVTPPSTSPPSASSPGHLAMPPPQLPMAVTAPAAT 309
Query: 263 KKVKSVN-FNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEP 318
+ V S+ P++V+LLRNMVGPG+VD+ELE EV EC KYG V V+I E T P
Sbjct: 310 EPVPSITEIMKDPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHEAFGTSP 369
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++AV+IFV+F+R E KA++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 370 ----EDAVKIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFYNFDKFKSFQL 417
>gi|195385190|ref|XP_002051289.1| GJ13092 [Drosophila virilis]
gi|194147746|gb|EDW63444.1| GJ13092 [Drosophila virilis]
Length = 432
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 195/454 (42%), Gaps = 113/454 (24%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQT---ILKPQSKPKTT- 60
LY D+ + KP T WSS KM L + P+ I KP P
Sbjct: 3 LYDDI-----DAKPRATQMDGWSSGIKMLQTQLAVKKAQLPKPKARDQIKKPLMTPVVNL 57
Query: 61 --------QNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTST---VIEEYDPARPNDYE 109
+N +P + P I + P PAL + + ++EYDP PN+YE
Sbjct: 58 RTKRNADAENFVPMTVAARPIITST----TVAPPPALENIKTDDWDFVDEYDPQWPNEYE 113
Query: 110 ---------DYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGEE 160
D R E R+ +R R +R R R E N S M
Sbjct: 114 KLKDKTKGSDKSRNSGGSGNREERDRDRDRDRDRDRKRNRGGRRETHNHDTSPPAMKFSG 173
Query: 161 AWKRRA------------AMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGA 208
+R++ GG +P PP +++++G G TI S +S
Sbjct: 174 FGQRQSDEDRYSPPAPGSVAKQGGGAAIAP-PPSLSIDNGDGSSNVTIPYSASS------ 226
Query: 209 GGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE--------NK 260
A ++MAK G+K+GQGLG+ EQG++ L KT +R G I++ + +
Sbjct: 227 -----VAAKIMAKYGFKDGQGLGKSEQGMSVALQVEKTSKRGGRIIHEKDVFLPPPSTSP 281
Query: 261 SEKKVKSVNFNGP-----------------------------------------PTRVLL 279
++ +VN P P++V+L
Sbjct: 282 PLSQLSAVNVTPPVSSPSPTAAAAASMPPPPLPGAATPAPASEPEPSITEIMKAPSKVVL 341
Query: 280 LRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEPNFPVDEAVRIFVQFERSE 336
LRNMVGPG+VD+ELE EV EC KYG V V+I E T P ++AV+IFV+F+R E
Sbjct: 342 LRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHEAFGTVP----EDAVKIFVEFKRIE 397
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
KA++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 398 SAIKAVVDLNGRFFGGRQVRAGFYNFDKFKSFQL 431
>gi|410919061|ref|XP_003973003.1| PREDICTED: splicing factor 45-like isoform 2 [Takifugu rubripes]
Length = 417
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 194/415 (46%), Gaps = 86/415 (20%)
Query: 19 TNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKTTQNSLPTRPHSSPAIAPSP 78
++T T WS + K+ L+ + Q+K + + + P S
Sbjct: 12 SDTKTEGWSKNFKLLQSQLKVKKAALT--------QAKTQRVKQTTVLAPVIDLKRGGSS 63
Query: 79 DD--AAALPQPALVGVTSTV-------------IEEYDPARPNDYEDYRREKKKKAVDAE 123
DD + +P A G+ TV +EYDP P+DYE K+ +
Sbjct: 64 DDRQISEMPPHAAAGMKDTVPSGFSSSDVLIPLADEYDPMFPHDYEKVM----KRHREER 119
Query: 124 IRRELERRRQEGEERERREREERENASASRLNM---------SGEEAWKRRAAMSSGGV- 173
R+ + R++E EERE++ ++ E + S + E+ K R S GG
Sbjct: 120 QRQREQERQKEIEEREKKRKDRHEGGAPSGFSRFPAAEGDSDEDEDYEKERRKRSMGGAA 179
Query: 174 --PPRSPSPPPVNVESGGGGGGFTIGKSE------------------TSGLGLGAGGQMT 213
PP S P + K+ TS GG T
Sbjct: 180 IAPPSSLVDRPSSFSYEDEAPSTRGAKAAIPPPMFEDPDRPRSPPGPTSSFLANMGG--T 237
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASE------------- 258
A ++M K G+KEGQGLG+ EQG++T L KT +R G I+ +A+E
Sbjct: 238 VAHKIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDAAEKRKSSSSAAFSSS 297
Query: 259 -------NKSEKK-VKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRV 310
+KSE + + N PT+V+LLRNMVG GEVD++LE+E EC KYG V +
Sbjct: 298 GSTFTPASKSEANPLTEILKN--PTKVVLLRNMVGRGEVDEDLEEETKEECEKYGKVVKC 355
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+IFEI E P DEAVRIF++FER E KA++DL+GR+FGGRVV+A FY+ ++F
Sbjct: 356 VIFEIAE--VPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKF 408
>gi|224101001|ref|XP_002312102.1| predicted protein [Populus trichocarpa]
gi|222851922|gb|EEE89469.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 91/130 (70%), Gaps = 26/130 (20%)
Query: 154 LNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMT 213
+N+ GEEAW+RRAAMS GGVP RS SPP G GF+IG QMT
Sbjct: 30 VNIFGEEAWRRRAAMS-GGVP-RSSSPPR-------NGDGFSIGT------------QMT 68
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNG- 272
AAQRMMAKMGWKEGQGLG+QEQGI T LMA+KTDRRA VIVNA SEKKVKSVNFNG
Sbjct: 69 AAQRMMAKMGWKEGQGLGKQEQGIMTSLMAKKTDRRAAVIVNA----SEKKVKSVNFNGT 124
Query: 273 PPTRVLLLRN 282
PPT V L N
Sbjct: 125 PPTWVFSLDN 134
>gi|195483222|ref|XP_002086892.1| GE10978 [Drosophila yakuba]
gi|194187173|gb|EDX00757.1| GE10978 [Drosophila yakuba]
Length = 367
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 155/327 (47%), Gaps = 74/327 (22%)
Query: 98 EEYDPARPNDYEDYRR-----EKKKKAVDAEIRRELERRRQEGEERERREREERENASAS 152
+EYDP PN+YE + +K + V +E++R+R R R R+ A
Sbjct: 60 DEYDPQWPNEYEKLKEKTNGSDKNRGFVCGSEEKEIDRKRG----RVGRREVHRDEVLAP 115
Query: 153 RLNMSG--EEAWKRRAAMSSGGVPPR----SPSPPP----VNVESGGGGGGFTIGKSETS 202
L +G + + S G + + +PPP ++++SG T+
Sbjct: 116 NLKFTGFGQRQLDDDIYLPSAGSVAKQGGATIAPPPSLQEISIDSGC---------EVTN 166
Query: 203 GLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVN------- 255
+ A + A ++MAK G+K+GQGLG+ EQG+ L KT +R G I++
Sbjct: 167 SMPYSAS---SVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDVFLP 223
Query: 256 -----------------------------ASENKSEKKVKSVNFNGPPTRVLLLRNMVGP 286
+ E P++V+LLRNMVGP
Sbjct: 224 PLALSPPADGSQVGPSPGHKAMPPPQVAGTATESGETGSTITEIMKSPSKVVLLRNMVGP 283
Query: 287 GEVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEPNFPVDEAVRIFVQFERSEQTTKALI 343
G+VD+ELE EV EC KYG V V+I E T P ++AV+IFV+F R E KA++
Sbjct: 284 GDVDEELEPEVKDECNTKYGEVNSVIIHESFGTVP----EDAVKIFVEFRRIESAIKAVV 339
Query: 344 DLDGRFFGGRVVRATFYDEERFSKNEL 370
DL+GRFFGGR VRA FY+ ++F + +L
Sbjct: 340 DLNGRFFGGRQVRAGFYNYDKFKRFQL 366
>gi|403347165|gb|EJY72999.1| hypothetical protein OXYTRI_05871 [Oxytricha trifallax]
Length = 327
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 151/295 (51%), Gaps = 45/295 (15%)
Query: 98 EEYDPARPNDYEDYRREKK--KKAVDAEIRRELERRRQ-EGEERERREREERENASASRL 154
EEY+PA+PND+E + K KK + A + RE ++Q E +E++ + + E S+
Sbjct: 56 EEYNPAQPNDFEKIIGKAKALKKELIARVEREKALKKQIEFQEQQLLGQNQEEEDDFSQ- 114
Query: 155 NMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTA 214
M+ +E ++ R + R + +G SE G+G G
Sbjct: 115 -MTADEVYQAR-------LKKRQQQSQQ--------PDQYDMGSSE--GMGSSNKGD-NK 155
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS---------ENKSEKKV 265
++MM MGWK G+GLG+QEQGI PL+A+KTD + VIV +S + + +K+
Sbjct: 156 VKKMMEAMGWK-GKGLGKQEQGIINPLIAKKTDANSAVIVESSITHDLLVEKQAQKQKED 214
Query: 266 KSVNFNGPP------TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPN 319
++ G P ++VL+ N+V EVDDEL DEV EC KYG ++ ++ +
Sbjct: 215 MQMSLRGLPQLPQKQSKVLVFENLVNIQEVDDELRDEVKFECEKYGPLSMCIVHTV---- 270
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLP 374
P +E VRIF Q+ + E + A ID R F G++++ FY EE KN +P
Sbjct: 271 -PSEELVRIFAQYTKLEDSQNAYIDFSQREFAGKMIKVDFYGEELL-KNRQFNMP 323
>gi|312382254|gb|EFR27775.1| hypothetical protein AND_05136 [Anopheles darlingi]
Length = 178
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 103/179 (57%), Gaps = 28/179 (15%)
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNF-------- 270
MAK G+K+GQGLG+QEQG+ L KT +R G IV+ + + +
Sbjct: 1 MAKYGFKDGQGLGKQEQGMAVALQVEKTSKRGGRIVHEKDIPAGGSSGTGGNTATPAGGG 60
Query: 271 ---NGPPTR---------VLLLR-----NMVGPGEVDDELEDEVGSEC-AKYGTVTRVLI 312
G P R +++ NMVGPG+VDDELE EV EC KYG V V+I
Sbjct: 61 EPATGSPQRTGSATEPSITEIMKSPSKVNMVGPGDVDDELEPEVKDECNTKYGDVVTVVI 120
Query: 313 FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
E+ PN +E+VRIFV+F+R E KA++DL+GRFFGGR VRA FY++ERF +L
Sbjct: 121 HEV--PNVVPEESVRIFVEFKRIESAIKAVVDLNGRFFGGRQVRAGFYNQERFENMDLG 177
>gi|194916573|ref|XP_001983016.1| GG11065 [Drosophila erecta]
gi|190647619|gb|EDV45013.1| GG11065 [Drosophila erecta]
Length = 200
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 109/197 (55%), Gaps = 43/197 (21%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENK------------ 260
+ A ++MAK G+K+GQGLG+ EQG+ L KT +R G I++ ++
Sbjct: 7 SVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDSFLPPLALSPPSMG 66
Query: 261 -------SEKKVKSVNFNG-----------------PPTRVLLLRNMVGPGEVDDELEDE 296
S K + G P++V+LLRNMVGPG+VD+ELE E
Sbjct: 67 FQIGPSPSHKAMLLPQVAGKAAESGETGSSITEIMKSPSKVVLLRNMVGPGDVDEELEPE 126
Query: 297 VGSEC-AKYGTVTRVLIFEI--TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGR 353
V EC KYG V V+I E T P ++AV+IFV+F R E KA++DL+GRFFGGR
Sbjct: 127 VKDECNTKYGEVNSVIIHESFGTVP----EDAVKIFVEFRRIESAIKAVVDLNGRFFGGR 182
Query: 354 VVRATFYDEERFSKNEL 370
VRA FY+ ++F + +L
Sbjct: 183 QVRAGFYNYDKFKRFQL 199
>gi|313245661|emb|CBY40324.1| unnamed protein product [Oikopleura dioica]
Length = 445
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 153/341 (44%), Gaps = 78/341 (22%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMS 157
+EYDP +PN++ Y R ++ E + ++ R ++ + +ER + R+N + +
Sbjct: 110 DEYDPIKPNEFSRYLRRRR------EGKHKVTRYAEQKKSQERDYK--RQNPKSDSDSSE 161
Query: 158 GEEAWKRRAAMSSGGV---PPRS--------PSPPPVNVESGGGGGGFTIGKSETSG--L 204
EE KR+ AM G PP + P+ P G T +++T G L
Sbjct: 162 DEEKSKRQKAMGMGKAMIAPPSALYAGQSSMPNMPAAKNPDLGALSSKTASRTKTLGSKL 221
Query: 205 GLG--------------------------------AGGQMTAAQRMMAKMGWKEGQGLGR 232
G G A + A+R+M K G KEG GLG+
Sbjct: 222 GFGQPKPSLFGKSVPSTPQFWTPSSQQPVKTVEQGAADAKSIAERIMEKYGHKEGAGLGK 281
Query: 233 QEQGITTPLMARKTDRRAGVIV--------NASENKSEKKVKS-------VNFNGP---- 273
QGI PL KT RR G IV N + + ++ V P
Sbjct: 282 SGQGIAAPLEVEKTSRRGGKIVGGQTASYGNFTSGGVQHHAQTPPPARANVGVTPPRPLP 341
Query: 274 ----PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
PT+V+ L NMV P E+D EL E+ ECAKYGTV V I E+ PN P + +VRIF
Sbjct: 342 NLAKPTKVICLENMVDPEEIDGELSGEISGECAKYGTVANVKIAEV--PNMPKEASVRIF 399
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++F R E+ KA+I L R FGGR + FYD +++S +
Sbjct: 400 IEFSRMEEAMKAVIGLHNRIFGGRRLIGGFYDFDQYSSGNV 440
>gi|426378576|ref|XP_004055993.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 45-like [Gorilla
gorilla gorilla]
Length = 416
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 197/436 (45%), Gaps = 99/436 (22%)
Query: 1 MLGGLYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTL--RKPSSIFAPPQ-----TILKP 53
L L D+P S+E +++ T WS + K+ L +K + A Q T+L P
Sbjct: 12 FLFLLRKDVPVRSEE--TSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQGTVLAP 69
Query: 54 QSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPALVGVTSTVI-----EEYDPARPNDY 108
K +S + +P P A L P G ++ + +EYD PND
Sbjct: 70 VIDLKRGGSSNDRQIVDTPPHVP-----AGLKDPVPSGFSAGEVLIPLADEYDLMFPNDC 124
Query: 109 EDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASR--------------- 153
++ K+ + + +RELER++ E EERE+R + + SR
Sbjct: 125 ---KKVVKRXREEPQRQRELERQK-EIEEREKRHKYRHDAREFSRRSDPDSDEDEDXERE 180
Query: 154 ---LNMSG---------------------EEAWKRRAAMSSGGVPP---------RSPSP 180
+M G EE + R+ S VPP RSP+
Sbjct: 181 KRKTSMGGAAIASPTSLAVKDXLPRDFPYEEDSRPRSQSSKTAVPPPVYEEQDRPRSPTR 240
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + GG T A +++ K G++EGQGLG+ EQG++T
Sbjct: 241 PSNSFLANLGG---------------------TVAHKIVQKYGFREGQGLGKHEQGLSTA 279
Query: 241 LMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDDELED 295
KT + I+ +A+ + KK S PT+V+LLRNMVG G+VD++L+
Sbjct: 280 FSVEKTSKLGSKIIVGDATGKDASKKSDSNPLTEILKCPTKVVLLRNMVGAGKVDEDLKV 339
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
+ E KY V + ++FE + P DEAVRIF++FER + +A+ID +GR+FGG+V
Sbjct: 340 KTKEEREKYLKVGKSVLFEXS--GAPDDEAVRIFLEFERVKSAIQAVIDSNGRYFGGQVA 397
Query: 356 RATFYDEERFSKNELA 371
A FY+ E+F +LA
Sbjct: 398 NACFYNLEKFRVLDLA 413
>gi|393220594|gb|EJD06080.1| hypothetical protein FOMMEDRAFT_18283 [Fomitiporia mediterranea
MF3/22]
Length = 554
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 25/183 (13%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRA---------------------GVI 253
A RMMAK G KEGQGLG + QGI L K + A G I
Sbjct: 369 AARMMAKWGHKEGQGLGAEGQGIVNALTVEKVVQEAEGKAKKGPIKPKDPVGMGVSRGRI 428
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV-DDELEDEVGSECAKYGTVTRVLI 312
+NA+E+ K + + GPP+RV++L NMVGP + DDEL +E+G EC+K GTV RVL+
Sbjct: 429 INANEDA--KTREDLARFGPPSRVVVLTNMVGPEDAEDDELREEIGDECSKNGTVNRVLV 486
Query: 313 FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL-A 371
+ P ++AVRIFV F K + +LDGR+F GR+V+A ++ E +F + +L A
Sbjct: 487 HLVEPPPENEEDAVRIFVAFNGPAAAWKTVRELDGRYFAGRMVQARYFPESQFKQFDLNA 546
Query: 372 PLP 374
PLP
Sbjct: 547 PLP 549
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQE----------------GEERERR 141
E Y+P RPNDY +Y+ KK++ + +R +ER++ E ++ +R
Sbjct: 130 EPYNPIRPNDYYEYKEWKKREQEERRLRLAIERQQNERKRYRSDSYSASEYSYSDDDDRP 189
Query: 142 EREERENASASRLN----------MSGEEAWKRRAAMSSGGVPPRSPSPPP 182
+ R A ++ M+G+EA+ RR AMS G P + +P P
Sbjct: 190 AKNARWEDEARHMDDTPPVVVDTSMTGDEAYARRLAMSQGIAAPSATTPAP 240
>gi|298706682|emb|CBJ29611.1| DNA-damage repair protein drt111, putative [Ectocarpus siliculosus]
Length = 482
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 93/161 (57%), Gaps = 18/161 (11%)
Query: 212 MTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSE--------- 262
M A+RMMAKMG KEGQGLG QGI+ PL + GVI +K
Sbjct: 291 MNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPA 350
Query: 263 ---KKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPN 319
+K + + N PTRVLLL+NMVGPGEVDDELE E EC ++G V R LI+EI +
Sbjct: 351 APARKKRGLFSN--PTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIKGGD 408
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRV--VRAT 358
P E VRIFV FE+ E K L+D GR GG++ V AT
Sbjct: 409 TPDTERVRIFVAFEKQESAVKGLLDELGR--GGKMGAVHAT 447
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 13/133 (9%)
Query: 24 TVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPKT-TQNSLPTRPHSSPAIAPSPDDAA 82
T +++++MAPPTL++P PP SK K+ ++S PT+ +P SP AA
Sbjct: 50 TAKAATSRMAPPTLKRP----GPPSAAGARPSKTKSKAESSTPTKAKETP----SP--AA 99
Query: 83 ALPQPALVGVTSTVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERRE 142
+ PQ +G V ++YDPARPNDY +Y RE+ K E REL+ +E +ERER+
Sbjct: 100 SRPQSWDMGF-GDVDDDYDPARPNDYMEYCRERIDKKKQEERDRELKIIMEE-QERERKR 157
Query: 143 REERENASASRLN 155
++E A+ ++
Sbjct: 158 QDEERAATIKKIQ 170
>gi|353239145|emb|CCA71067.1| hypothetical protein PIIN_05002 [Piriformospora indica DSM 11827]
Length = 626
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 103/183 (56%), Gaps = 30/183 (16%)
Query: 211 QMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTD----------------------- 247
Q A RMM K G+ +GQGLG GI P+M + +
Sbjct: 441 QAGFAARMMEKYGYVQGQGLGANADGIVEPIMLERANAPKATKKGEEGPKKSGAGGMGIG 500
Query: 248 -RRAGVIVNASENKSEKKVKSVNFN-GPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYG 305
+ G IVNA ++E+K+K+ G +R+++L NMVGP +VDD+L+ E+G EC+K+G
Sbjct: 501 GSKMGRIVNA---QAEEKIKADLLRYGESSRIVVLTNMVGPEDVDDDLQGEIGDECSKHG 557
Query: 306 TVTRVLI-FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
TV RV++ P+ P D AVRIFVQF KA+ +LDGRFFGGR VRA ++DE
Sbjct: 558 TVERVVVHLPYPTPDNPED-AVRIFVQFAGPAAAWKAVRELDGRFFGGRTVRAKYFDEGN 616
Query: 365 FSK 367
F K
Sbjct: 617 FIK 619
>gi|432942100|ref|XP_004082959.1| PREDICTED: splicing factor 45-like [Oryzias latipes]
Length = 164
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI E P DEAVRIF++FE
Sbjct: 66 PTKVVLLRNMVGRGEVDEDLEGETKEECEKYGKVVKCVIFEIAEV--PDDEAVRIFLEFE 123
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
R E KA++DL+GR+FGGRVV+A FY+ ++F
Sbjct: 124 RVESAIKAVVDLNGRYFGGRVVKACFYNLDKF 155
>gi|119606812|gb|EAW86406.1| RNA binding motif protein 17, isoform CRA_b [Homo sapiens]
Length = 127
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P P DEAVRIF++FE
Sbjct: 29 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFE 86
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
R E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 87 RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 124
>gi|348684008|gb|EGZ23823.1| hypothetical protein PHYSODRAFT_255134 [Phytophthora sojae]
Length = 534
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERS 335
V+LL+NMVGPGEVDDEL+DEV EC+ KYG V + I+E+T + P +EAVRIFVQF+ +
Sbjct: 440 VVLLQNMVGPGEVDDELQDEVKGECSEKYGPVAKCTIYEVT-GSVPPEEAVRIFVQFQDA 498
Query: 336 EQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
E TKAL L+GRFFGGR V+A +YDE RF + ++
Sbjct: 499 EDATKALTGLNGRFFGGRKVKAVYYDERRFERMDI 533
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 94 STVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERRER 143
+T +EY PARPN YE Y +E++++ ++++EL RR++E +ERE R +
Sbjct: 159 ATYRDEYHPARPNSYEVYCKERQERKKMEQVKKELTRRQRE-QEREVRAK 207
>gi|151567827|pdb|2PE8|A Chain A, Crystal Structure Of The Uhm Domain Of Human Spf45 (free
Form)
gi|151567828|pdb|2PEH|A Chain A, Crystal Structure Of The Uhm Domain Of Human Spf45 In
Complex With Sf3b155-Ulm5
gi|151567830|pdb|2PEH|B Chain B, Crystal Structure Of The Uhm Domain Of Human Spf45 In
Complex With Sf3b155-Ulm5
Length = 105
Score = 120 bits (300), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/98 (59%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P P DEAVRIF++FE
Sbjct: 7 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFE 64
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
R E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 65 RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 102
>gi|118363382|ref|XP_001014636.1| G-patch domain containing protein [Tetrahymena thermophila]
gi|89296683|gb|EAR94671.1| G-patch domain containing protein [Tetrahymena thermophila SB210]
Length = 441
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 144/285 (50%), Gaps = 30/285 (10%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMS 157
EEYDPARPNDYE ++E K+ +++LE+ + + E E + +S
Sbjct: 172 EEYDPARPNDYEILKKEINKQ------KQDLEKFKSKKSLGNSTEEEVIVQPQNNIQKLS 225
Query: 158 GEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTA--- 214
+ ++ P + G G + + E L + G
Sbjct: 226 YNDDYEMEEEDEDDDFRP-----------AFGLGMKNSQMEIEKDTADLYSKGDYETSEQ 274
Query: 215 -AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKS----EKKVKSVN 269
A +MM K G+K GQGLG+ +QGI P++A+K + +I ++ + S ++ V
Sbjct: 275 KAYKMMEKQGFKLGQGLGKNQQGIVAPIIAQKISDTSAIITQSTMDLSTILPQELVMKRY 334
Query: 270 F---NGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
F N PT+V+ + N++ P E+D++LE+EV EC +YG V + I+ ++ + ++AV
Sbjct: 335 FEQRNLIPTKVVCIINLIAPWEIDEDLEEEVTEECFQYGVVVNLKIYVMSSED--CEDAV 392
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
RIF+++ + E+ A +LDGR F GR V FY EE F KN+L+
Sbjct: 393 RIFIKYNQVEEAMNAFTNLDGRIFNGRSVIGYFYSEEEFEKNQLS 437
>gi|399218130|emb|CCF75017.1| unnamed protein product [Babesia microti strain RI]
Length = 345
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 181/409 (44%), Gaps = 108/409 (26%)
Query: 1 MLGGLYGDLPPPS--DED----------------KPTNTTTTV---------WSSSAKMA 33
M+ LYGDLPPP DED KPT T TT+ S+S ++
Sbjct: 1 MIDSLYGDLPPPQFGDEDGFKPTIFISDAIKPLLKPTQTVTTISNTKFHSSNQSTSQQLQ 60
Query: 34 PPTLRKPSSIFAPPQTILKPQSKPKTTQNS-LPTRPHSSP-------AIAPSPDDAAALP 85
+L + + + + ++ ++P S LPT+P +S AI + + ++
Sbjct: 61 NYSLSQQNHVSSQSKS--SNSARPIQIHFSALPTKPDNSSDSNRSIVAINSNNNSPVSID 118
Query: 86 QPALVGVTSTVI--EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERRER 143
+ + EEY+PA PN Y+ Y EK E++R+ + RR
Sbjct: 119 DADVTTYKYNSLDDEEYNPAYPNSYDRYINEK-----------EVKRKISDNRSIPRRGI 167
Query: 144 EERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSG 203
+ LN++GEEAWK+RA+MS P+ P+ +E FT
Sbjct: 168 D---------LNVTGEEAWKKRASMSD-------PAAIPIGLE-------FT-------- 196
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEK 263
G + A R+M KMGWK G+GLG+ +QGI TPL+A+K + + +I ++
Sbjct: 197 ---SNGSKKNLAARLMEKMGWKAGEGLGKDKQGIKTPLIAKKVAQNSAIIT------TQD 247
Query: 264 KVKSVNFNGPPTRVLLLR--NMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
+ ++N +R+L L+ NM+ V+D E +KYG++ + P+
Sbjct: 248 SIFTLNNKTQISRILYLKSDNMLSLDIVED--------EASKYGSLISI------RPHNS 293
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
D RIF++FE + Q +++ G ++ +Y + F+ + L
Sbjct: 294 SD--YRIFLEFETAIQGANCYKNMNKSTLNGSILSLYYYPVDEFANDNL 340
>gi|167536803|ref|XP_001750072.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771401|gb|EDQ85068.1| predicted protein [Monosiga brevicollis MX1]
Length = 475
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 74/103 (71%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PTRV+LL+NMVGPGEVD +L+ E +EC+++G VT+ +FE + D+AVRIFV+F
Sbjct: 372 PTRVVLLQNMVGPGEVDGDLQPETANECSRFGQVTKCTVFECPRGSVRDDQAVRIFVEFA 431
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
+A ++ GRFFGGR VRA+F+D +RF++ +LAP GE
Sbjct: 432 DLPAAARARQEMHGRFFGGRQVRASFFDADRFARQDLAPRAGE 474
>gi|392595680|gb|EIW85003.1| hypothetical protein CONPUDRAFT_79705 [Coniophora puteana
RWD-64-598 SS2]
Length = 511
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 128/291 (43%), Gaps = 76/291 (26%)
Query: 154 LNMSGEEAWKRRAAMSSGGVPP-------RSPSPPPV----------------------- 183
L +G+EA+ RR AMS V P R+PSPPP+
Sbjct: 219 LAQTGDEAYARRLAMSQ--VAPLSQPEAARAPSPPPLAYNPFAPPSSVPPPPSVGPSTVA 276
Query: 184 -------------NVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQ-------------- 216
++ + G G G+ G+ G G Q+ +Q
Sbjct: 277 VPLGLEDRIKAAASIAARLGALGVNQGQPMHGGISPGPGSQLALSQAENEGESSKRPNPH 336
Query: 217 ----RMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFN- 271
R+MAK G KEGQGLG GI L + + +K + VN N
Sbjct: 337 GFAARLMAKWGHKEGQGLGADGAGIVNALTVEQVQSGKSGKKGGGQGVHGQKGRIVNDND 396
Query: 272 -----------GPPTRVLLLRNMVGPGEVDD-ELEDEVGSECAKYGTVTRVLIFEITEPN 319
G P+RV++L NM+ +V+D +L D++GSEC+K GTV RV++ + P
Sbjct: 397 DPRAREDRLRFGEPSRVVVLTNMISIDDVEDGDLRDDIGSECSKNGTVERVIMHAVYPPP 456
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
DEAVR+FV F K + +LDGRFFGGR VRA +Y E F +++L
Sbjct: 457 PNEDEAVRVFVLFAGPSGAWKTVRELDGRFFGGRAVRARYYPEISFQRHDL 507
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 33/113 (29%)
Query: 97 IEEYDPARPNDYEDYRREKKKKAVDAEIRRELERR--RQEGEERERREREEREN------ 148
+E YDP PNDY +Y+ K+++ V+ R +R+ R++G+E E + E E
Sbjct: 46 LESYDPLHPNDYNEYKMWKQRERVERAAERAADRKRAREKGDESEYTDEESDEGRPRKTG 105
Query: 149 ------------------------ASASRLNMSGEEAWKRRAAMSSGGVPPRS 177
A R N SGEE ++RR AMSSG P S
Sbjct: 106 RYDEDMARPYYDDEEQPRGLDAPPAPVDR-NFSGEEVYQRRLAMSSGSHTPAS 157
>gi|90086107|dbj|BAE91606.1| unnamed protein product [Macaca fascicularis]
Length = 124
Score = 117 bits (292), Expect = 1e-23, Method: Composition-based stats.
Identities = 58/98 (59%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFEI P P DEAVRIF++FE
Sbjct: 26 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFE 83
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
R E KA++DL+GR+FGGRVV+A FY+ ++F +LA
Sbjct: 84 RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 121
>gi|70943659|ref|XP_741849.1| RNA binding protein [Plasmodium chabaudi chabaudi]
gi|56520489|emb|CAH78667.1| RNA binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 322
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 96/165 (58%), Gaps = 16/165 (9%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA------SENKSEKKVKSV 268
A RMM KMGWK+G+GLG+ +QGI PL+ +K D+R+GVIV A +E +EK S
Sbjct: 153 ATRMMEKMGWKKGEGLGKDKQGIKAPLILQKVDKRSGVIVQAPIILKKTELANEKNNDSY 212
Query: 269 N--------FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNF 320
+ N TR++ L N+V EVDD L++E+ E +K+G + + I +T+PN
Sbjct: 213 DDEADAANSANNTVTRIIQLTNLVTIDEVDDTLKEEIEEEGSKFGNLLNINI--VTDPNL 270
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
AV+I+ ++E S+Q A R F GR V+ +F +E+ +
Sbjct: 271 LDALAVKIYCEYESSDQAKNAFNTFKERTFAGRKVKVSFVNEQEY 315
>gi|156100245|ref|XP_001615850.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148804724|gb|EDL46123.1| RNA binding protein, putative [Plasmodium vivax]
Length = 602
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 96/181 (53%), Gaps = 25/181 (13%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA------------------ 256
A RMM KMGWK+G+GLG+ +QGIT PL+ +K D+R+GVIV A
Sbjct: 424 ATRMMEKMGWKKGEGLGKDKQGITAPLILQKVDKRSGVIVQAPDILKKHKSGDGQEDNND 483
Query: 257 ---SENKSEKKVKSVN--FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVL 311
S +KS + N + +R++ L N+V EVDD L++E+ E +K+G + +
Sbjct: 484 DGNSFSKSNANLAHSNHALSNSTSRIIRLSNLVTKDEVDDTLKEEIEEEASKFGNLLNIN 543
Query: 312 IFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
I + N AV+IF ++E ++Q AL GR F GR V A F EE + + A
Sbjct: 544 I--AIDKNLTDAHAVKIFCEYESNDQAQNALNTFKGRTFAGRKVEAIFATEEEYLSHGKA 601
Query: 372 P 372
P
Sbjct: 602 P 602
>gi|390598653|gb|EIN08051.1| hypothetical protein PUNSTDRAFT_104276 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 707
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 97/176 (55%), Gaps = 26/176 (14%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTD-----------------------RRAG 251
A R+MAK G KEGQGLG QGI L + + G
Sbjct: 525 AARLMAKWGHKEGQGLGADGQGIVNALTVEQVSAGKGKKAAQAQAQNGGKGIGLAGKGMG 584
Query: 252 VIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDE-LEDEVGSECAKYGTVTRV 310
I+N +E+ ++ K + F G P+RV++L NMVGP + DDE L E+G EC+K GTV RV
Sbjct: 585 RIINDNEDAKTREDK-MRF-GEPSRVVVLTNMVGPEDADDEDLRGEIGDECSKNGTVERV 642
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++ ++ P +EAVRIFV F K + +LDGR+FGGR VRA ++ E+ F+
Sbjct: 643 VVHLLSPPPENPEEAVRIFVVFAGPAGAWKTVRELDGRYFGGRTVRARYFPEKHFN 698
>gi|221059379|ref|XP_002260335.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193810408|emb|CAQ41602.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 602
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 25/174 (14%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA-------------SEN-- 259
A RMM KMGWK+G+GLG+ +QGIT PL+ +K D+R+GVIV A +EN
Sbjct: 424 ATRMMEKMGWKKGEGLGKDKQGITAPLILQKVDKRSGVIVQAPDILKKHKSSDGHNENND 483
Query: 260 ------KSEKKVKSVN--FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVL 311
KS + N + +R++ L N+V EVDD L++E+ E +K+G + +
Sbjct: 484 DGNSFAKSNANLSHSNHALSNNTSRIIRLSNLVTKDEVDDTLKEEIEEEASKFGNLLNIN 543
Query: 312 IFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
I + N AV+IF ++E +Q AL GR F GR V A F EE +
Sbjct: 544 I--AIDKNLSDAHAVKIFCEYESKDQAQNALNTFKGRTFAGRKVEAIFATEEEY 595
>gi|409046454|gb|EKM55934.1| hypothetical protein PHACADRAFT_144873 [Phanerochaete carnosa
HHB-10118-sp]
Length = 680
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 93/172 (54%), Gaps = 18/172 (10%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTD---------------RRAGVIVNASEN 259
A R MAK G KEGQGLG GI L + + G IVN +E+
Sbjct: 507 AARFMAKWGHKEGQGLGADGSGIVHALSMEQVQTGKGKGEKGKGPSVASKMGKIVNKNED 566
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDE-LEDEVGSECAKYGTVTRVLIFEITEP 318
++ + F G P+RV++L NMVGP + DDE L +E+G EC+K GTV RV++ + P
Sbjct: 567 AKAREDRE-RF-GEPSRVVVLTNMVGPDDADDEDLREEIGDECSKNGTVERVIVHLVNPP 624
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
D AVRIFV F K + +LDGR+FGGR VRA ++ E F + L
Sbjct: 625 PPTEDLAVRIFVLFAGPVGAWKTVRELDGRYFGGRTVRARYFSENLFQQYAL 676
>gi|68076641|ref|XP_680240.1| RNA binding protein [Plasmodium berghei strain ANKA]
gi|56501143|emb|CAH98724.1| RNA binding protein, putative [Plasmodium berghei]
Length = 496
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 16/165 (9%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVN----------ASENKS--- 261
A RMM KMGWK+G+GLG+ +QGI PL+ +K D+R+GVIV A+EN +
Sbjct: 327 ATRMMEKMGWKKGEGLGKDKQGIKAPLILQKVDKRSGVIVQAPIILKKTELANENNNYPY 386
Query: 262 EKKVKSVN-FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNF 320
+ K + N N TR++ L N+V EVDD L++E+ E +K+G + + I IT+ N
Sbjct: 387 DDKTDAANSINNVFTRIIQLTNLVTIDEVDDTLKEEIEEEASKFGNLLNISI--ITDSNL 444
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
AV+IF ++E +Q A R F GR V +F +E+ +
Sbjct: 445 YDALAVKIFCEYESKDQANNAFNTFKERTFAGRKVIVSFVNEQEY 489
>gi|388579958|gb|EIM20277.1| hypothetical protein WALSEDRAFT_61086 [Wallemia sebi CBS 633.66]
Length = 432
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPP 274
A+R MA GWK+G+GLG + GI L +++ AG I++ E + +++ + + G P
Sbjct: 278 AERFMAMHGWKQGEGLGANKSGIKEALTLERSESGAGEIISKEEARLDREAR--DLYGEP 335
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
++ ++LRNMV EVD+EL E+ EC K G V RV+I E N P+D AV+I V+F
Sbjct: 336 SKTIILRNMVSIDEVDNELSQEIAEECNKNGIVERVVIHTPREYNDPID-AVKILVKFSG 394
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
K + +L+GRFFGG V+A +Y + F +
Sbjct: 395 LVGAYKNVRELNGRFFGGSQVKARYYPDNAFDR 427
>gi|340504188|gb|EGR30658.1| splicing factor 45, putative [Ichthyophthirius multifiliis]
Length = 191
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 9/164 (5%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEK---KVKSVNF- 270
A ++M K G++ GQGLG+ QGI P++A+K + +I ++++ S +V F
Sbjct: 25 AYKLMEKQGYRLGQGLGKMSQGIIAPIIAQKISDTSAIITQSTQDLSSLLPPEVVMKKFL 84
Query: 271 ---NGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVR 327
N PT V+ L NMV P E+D +LE E+ EC +G V + I+ + + ++AVR
Sbjct: 85 EQKNLTPTHVICLINMVSPYEIDADLEQEITEECFNFGKVINLKIYVMAAQD--CEDAVR 142
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
IFV++E ++ A ++LD R F GR V A FY+E+ F N L+
Sbjct: 143 IFVKYEYINESIVAFMNLDKRNFNGRQVMAYFYNEDFFEVNNLS 186
>gi|82705399|ref|XP_726954.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482574|gb|EAA18519.1| G-patch domain, putative [Plasmodium yoelii yoelii]
Length = 496
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 16/165 (9%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVN----------ASENKS--- 261
A RMM KMGWK+G+GLG+ +QGI PL+ +K D+R+GVIV A+EN +
Sbjct: 327 ATRMMEKMGWKKGEGLGKDKQGIKAPLILQKVDKRSGVIVQAPIILKKTELANENNNDSY 386
Query: 262 EKKVKSVN-FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNF 320
+ K + N N TR++ L N+V EVDD L++E+ E +K+G + + I IT+ N
Sbjct: 387 DDKTDAANSINNVFTRIIQLTNLVTIDEVDDTLKEEIEEEASKFGNLLNINI--ITDSNL 444
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
AV+IF ++E +Q A R F GR V +F +E+ +
Sbjct: 445 SDALAVKIFCEYESRDQAKNAFNTFKERTFAGRKVIVSFVNEQEY 489
>gi|389585316|dbj|GAB68047.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 527
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 93/174 (53%), Gaps = 25/174 (14%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA------------------ 256
A RMM KMGWK+G+GLG+ +QGIT PL+ +K D+R+GVIV A
Sbjct: 349 ATRMMEKMGWKKGEGLGKDKQGITAPLILQKVDKRSGVIVQAPDILKKHKSGDGQGDNND 408
Query: 257 ---SENKSEKKVKSVN--FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVL 311
S +KS + N + +R++ L N+V EVDD L++E+ E +K+G + +
Sbjct: 409 DGNSFSKSNANLGHSNHALSNNTSRIIRLSNLVTKDEVDDTLKEEIEEEASKFGNLLNIN 468
Query: 312 IFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
I + N AV+IF ++E ++Q AL GR F GR V A F EE +
Sbjct: 469 I--AIDKNLTDAHAVKIFCEYESNDQAQNALNTFKGRTFAGRKVEAIFATEEEY 520
>gi|402225414|gb|EJU05475.1| hypothetical protein DACRYDRAFT_113580 [Dacryopinax sp. DJM-731
SS1]
Length = 649
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKT---------DRRAGV--IVNASENKSEK 263
A RMMAK G KEGQGLG GI L K R+G+ I+N +E+ K
Sbjct: 481 AARMMAKWGHKEGQGLGVSGAGIVHALSVEKVGGAKKGKPEQGRSGMGKIINVNEDVKLK 540
Query: 264 KVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVD 323
+ V G ++V+ LRNMVG +VD +L+ E+ EC+K+G V RV I + P D
Sbjct: 541 E--EVERWGEHSQVICLRNMVGKEDVDADLQGEIAEECSKHGVVERVYIHVAPRRSAPED 598
Query: 324 EAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL-APLP 374
E VRIFV+F K++ +LDGRFF R V+A +YDE++F + PLP
Sbjct: 599 E-VRIFVKFSGPVGAWKSVRELDGRFFNRRTVKARYYDEQQFDMHYFDMPLP 649
>gi|124809808|ref|XP_001348687.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23497585|gb|AAN37126.1|AE014824_45 RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 511
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA----SENKSEKKVKSVNF 270
A RMM KMGWK+G+GLG+ +QGI PL+ +K D+R+GVIV A N K ++++
Sbjct: 352 ATRMMEKMGWKKGEGLGKDKQGIKAPLILKKVDKRSGVIVQAPVILKNNDLNNKGENLSV 411
Query: 271 NGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
TR++ L N+V P EVD+ L++E+ E +K+G + + I + + N AV+I+
Sbjct: 412 PNDCTRIVHLTNLVTPEEVDETLKEEIEEEASKFGNLLNINI--VVDKNLLDALAVKIYC 469
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++E +Q AL GR F GR V+A+F EE +
Sbjct: 470 EYESKDQAQNALNTFKGRTFAGRKVQASFATEEEY 504
>gi|302691076|ref|XP_003035217.1| hypothetical protein SCHCODRAFT_14389 [Schizophyllum commune H4-8]
gi|300108913|gb|EFJ00315.1| hypothetical protein SCHCODRAFT_14389 [Schizophyllum commune H4-8]
Length = 649
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 96/187 (51%), Gaps = 29/187 (15%)
Query: 211 QMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR---------------------- 248
Q T A R+MAK G KEGQGLG GI L +
Sbjct: 461 QHTFAARLMAKWGHKEGQGLGADGSGIVNALTVEQVGTTSGPKGKKGKQAQQQQQVQQPK 520
Query: 249 ----RAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV-DDELEDEVGSECAK 303
+ G IVN +E+ ++ + F G P+RV++L NMVGP +V D+EL E+G ECAK
Sbjct: 521 GLAAKMGKIVNNNEDARAREDRE-RF-GEPSRVVVLTNMVGPEDVGDEELRGEIGDECAK 578
Query: 304 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
GTV RV++ P +E VRIFV F K + ++DGR+FGGR VRA +Y E
Sbjct: 579 NGTVQRVIVHLANPPPANPEELVRIFVLFAGPAGAWKTVREMDGRYFGGRSVRARYYPET 638
Query: 364 RFSKNEL 370
F++ L
Sbjct: 639 YFTQYLL 645
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 97 IEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERRER 143
+E+YDP RPNDY +Y+ K K+ +ERR + EE +R R
Sbjct: 192 MEQYDPIRPNDYNEYKVWKSKE--------RIERRHRMAEESRKRRR 230
>gi|449543435|gb|EMD34411.1| hypothetical protein CERSUDRAFT_107594 [Ceriporiopsis subvermispora
B]
Length = 711
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 97/177 (54%), Gaps = 24/177 (13%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKT-------------------DRRAGVIVN 255
A R+MAK G KEGQGLG GI L + + G IVN
Sbjct: 534 AARLMAKWGHKEGQGLGADGSGIVHALTVEQIAAGRAKGQKGNQGGKGIQPGSKMGKIVN 593
Query: 256 ASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV-DDELEDEVGSECAKYGTVTRVLIFE 314
+E+ ++ + F G P+RV+LL NMVG +V D++L D++G EC+K GTV RVL+
Sbjct: 594 MNEDAKTREDRE-RF-GEPSRVVLLTNMVGLEDVYDEDLRDDIGGECSKNGTVERVLVHP 651
Query: 315 ITEPNFPV-DEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
T+P P +EAVRIFV F K + +LDGRFFGGR VRA ++ E F + E
Sbjct: 652 -TDPQPPNPEEAVRIFVLFAGPVGAWKTVRELDGRFFGGRTVRARYFPEALFQRCEF 707
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 43/117 (36%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERRE--------------- 142
E+YDP RPNDY +Y+ K+ + + R E+RR E +R RR+
Sbjct: 205 EQYDPTRPNDYNEYKIWKRHEREERRERLLTEKRRAEERKRYRRDSDYTDSEGSGSEDER 264
Query: 143 ----------REERENASASR------------------LNMSGEEAWKRRAAMSSG 171
RE+ E+ R L ++G+EA++RR AMS G
Sbjct: 265 PRKTGRFDGWREDSEDYDRPRGLGSAAPAVADPPPVHVDLGLTGDEAYQRRLAMSHG 321
>gi|299753497|ref|XP_001833314.2| DRT111 [Coprinopsis cinerea okayama7#130]
gi|298410327|gb|EAU88587.2| DRT111 [Coprinopsis cinerea okayama7#130]
Length = 630
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 95/176 (53%), Gaps = 17/176 (9%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKT---------DRRAGVIVNASENK 260
GQ R++AK G KEGQGLG GI PL + I N
Sbjct: 455 GQPGFGARLLAKYGHKEGQGLGADGSGIVNPLTLEQVASGGKGKGKGPPGPKIGKIINNN 514
Query: 261 SEKKVKS--VNFNGPPTRVLLLRNMVGPGEVDDE-LEDEVGSECAKYGTVTRVLIFEI-- 315
+++ K V F G P+R+L+L N+V P + DDE L ++G EC+K GTV RVL+ +
Sbjct: 515 EDRRAKEDLVRF-GEPSRILVLTNIVDPNDADDEDLRQDIGEECSKNGTVERVLVHVVDP 573
Query: 316 TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
PNF EAVR+FV F K++ +LDGR+FGGR +RA +Y E +F + + +
Sbjct: 574 LPPNFA--EAVRVFVVFAGPAGAWKSVRELDGRYFGGRSIRARYYPEAKFRQGDFS 627
>gi|325188176|emb|CCA22716.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 401
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 144/291 (49%), Gaps = 40/291 (13%)
Query: 94 STVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREER-ENASAS 152
S +EYDPARPN YE Y E+ K +++R+LE+R++ EE ++ER + ++ A
Sbjct: 137 SNARDEYDPARPNSYEVYCEERTNKKKLDKVKRDLEKRQRVQEEEAKKERAKLVKDVEAG 196
Query: 153 RLNMSGE--------EAWKRRAAMSSGGVPPRSPSP-PPVNVESGGGGGGFTIGKSETSG 203
++ G AW ++ S P +V + G + SE
Sbjct: 197 KVPSLGTGRGRGMTLPAWMQKKISESANAESDLPEERDQESVPTVSGQFDDPVVHSEAES 256
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGR--QEQGITTPLMARKTDRRAGVIVNASENKS 261
L + +EGQ QE ++TP ++ + N++ N+
Sbjct: 257 LNKSCSKDVRD----------QEGQTSQTPIQELTLSTP--------KSSAVTNSAPNR- 297
Query: 262 EKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECA-KYGTVTRVLIFEITEPNF 320
+K K+V +RV+LL+NMV P EVDD L EV EC+ KYG V +I+++ +
Sbjct: 298 -RKGKTVPQR---SRVILLQNMVTPDEVDDHLGSEVKEECSQKYGPVRNCIIYKVV--SH 351
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
P EA+RIFV+FE + +A+ L+GRFFGGR V AT Y+E +F + + +
Sbjct: 352 P--EAIRIFVEFENVQDADRAVAGLNGRFFGGRKVLATNYNESKFRRLDFS 400
>gi|341881743|gb|EGT37678.1| hypothetical protein CAEBREN_31758 [Caenorhabditis brenneri]
Length = 370
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 42/283 (14%)
Query: 99 EYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSG 158
EY P PN++E +E + + R++ +R Q E E ++R + + +
Sbjct: 114 EYYPMTPNNFELLAKELHDRKQREKTARDVAKRLQREHEEEDKKRSMGAAIAPPTMLIEP 173
Query: 159 EEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
E + SS P S PPP + + GK+ + GLG+ A +
Sbjct: 174 EPVINTQD--SSEEKPQSSYMPPPSFLPA--------FGKATSRGLGVAAN--------I 215
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVL 278
M K G++EGQGLG+ EQG++T L KT R G IV + S+ T++L
Sbjct: 216 MKKHGYREGQGLGKSEQGMSTALQVEKTGVRGGNIVAETPKAPTFAQNSMEAIQSSTKIL 275
Query: 279 LLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA------VR 327
L N+V EV D+ DE+ E K GTV V++ VDE+ VR
Sbjct: 276 QLSNLVEVDEVKDDEGKQSFADEIKEEMEKCGTVVNVIVH--------VDESQDEERHVR 327
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATF-----YDEERF 365
+FV+F EQ KA + ++GRFFGGR V A F Y+ +F
Sbjct: 328 VFVEFMTKEQAIKAFVMMNGRFFGGRSVSAGFQNIDDYNSRKF 370
>gi|342320675|gb|EGU12614.1| Hypothetical Protein RTG_01164 [Rhodotorula glutinis ATCC 204091]
Length = 726
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 29/185 (15%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKT-----------------------DRR 249
T A+RMM+K GW+EG+GLG E GIT L ++T
Sbjct: 544 TFAERMMSKFGWEEGKGLGASESGITAALSVQRTPAGSASSSKKAKKKKEPEAAPAPAGM 603
Query: 250 AG--VIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTV 307
AG V+V+ S ++ + K+ G +RV+LL N+ G EVDD+L EV E K+G V
Sbjct: 604 AGRSVVVDVSRDQRIAEQKA-QMGGDASRVVLLTNLCGRDEVDDDLGGEVAEEANKFGVV 662
Query: 308 TRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS- 366
R ++ + DEAVRIF+ A+ + DGRFFGGR VRA FYDE+ F+
Sbjct: 663 ERCFVY-VVPGETRDDEAVRIFLVMSGLAGGYNAVRNFDGRFFGGRTVRARFYDEKAFNS 721
Query: 367 -KNEL 370
++EL
Sbjct: 722 GRHEL 726
>gi|393238548|gb|EJD46084.1| hypothetical protein AURDEDRAFT_184426 [Auricularia delicata
TFB-10046 SS5]
Length = 626
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 39/186 (20%)
Query: 215 AQRMMAKMGWKEGQGLG-RQEQGITTPLMARKTDRRA----------------------- 250
A+R+M K G GQGLG R E+ I PL+ ++ ++
Sbjct: 445 AERLMKKWGHVAGQGLGARPEESIVVPLLVQQQKQQHKGAGEDDAGPSKGRGKMGMGSGA 504
Query: 251 ----GVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV-DDELEDEVGSECAKYG 305
G IVNA+EN ++ + G P+R+++L M P +V DDEL +++G ECAK+G
Sbjct: 505 KGAMGRIVNANENVGKEDIARF---GKPSRIVVLTEMCDPDDVEDDELREDIGEECAKFG 561
Query: 306 TVTRVLIFEITEPNFPVD-EAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
V RVL P+ D ++VR+FVQF K + DLDGRFFGG+ VRA +Y E R
Sbjct: 562 AVERVL------PHLCADGQSVRVFVQFAGEPAAWKCVRDLDGRFFGGKTVRARYYAEGR 615
Query: 365 FSKNEL 370
+ L
Sbjct: 616 WKSGHL 621
>gi|195051308|ref|XP_001993070.1| GH13625 [Drosophila grimshawi]
gi|193900129|gb|EDV98995.1| GH13625 [Drosophila grimshawi]
Length = 451
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 73/100 (73%), Gaps = 7/100 (7%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEPNFPVDEAVRIFV 330
P++V+LLRNMVGPG+VD+ELE EV EC KYG V V+I E T P ++AV+IFV
Sbjct: 355 PSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHEAFGTVP----EDAVKIFV 410
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+F+R E KA++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 411 EFKRIESAIKAVVDLNGRFFGGRQVRAGFYNFDKFKSFQL 450
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 11/76 (14%)
Query: 180 PPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITT 239
PP +++++G G TI S +S A ++MAK G+K+GQGLG+ EQG++
Sbjct: 215 PPSLSIDNGDGASNVTIPYSASS-----------VAAKIMAKYGFKDGQGLGKSEQGMSV 263
Query: 240 PLMARKTDRRAGVIVN 255
L KT +R G I++
Sbjct: 264 ALQVEKTSKRGGRIIH 279
>gi|17540798|ref|NP_502198.1| Protein F58B3.7 [Caenorhabditis elegans]
gi|3877880|emb|CAA97799.1| Protein F58B3.7 [Caenorhabditis elegans]
Length = 371
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 149/336 (44%), Gaps = 29/336 (8%)
Query: 45 APPQTILKPQSKPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPA-----LVGVTSTVIEE 99
APP ++ ++ +T ++ ++ P D+ + LP+ A ++ V E
Sbjct: 55 APP-PVIDLSTRNRTITTAVTSKSFQPIRANPVSDNISFLPKAATDESVMLFGEEHVKCE 113
Query: 100 YDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGE 159
Y P PN+YE +E + + RE+ +R Q E E ++R + + + M E
Sbjct: 114 YYPMTPNNYEVVAKEINDRKQREKTAREVAKRLQREHEEEDKKRSKGAAIAPPTMLMEPE 173
Query: 160 EAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMM 219
+ + P S PPP + + GK+ + GLG+ A +M
Sbjct: 174 PEVIKNTNENQDEKPHSSFMPPPSFLPA--------FGKATSRGLGIAAN--------IM 217
Query: 220 AKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLL 279
+ G+KEG GLG+ EQG++T L KT R G IV + S+ T++L
Sbjct: 218 KRHGYKEGAGLGKSEQGMSTALSIEKTGVRGGNIVAEAPKAPTFATNSMEAVQNATKILQ 277
Query: 280 LRNMVGPGEVD-----DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
L N+ EV E DE+ E K G V V++ + + D VR+FV+F
Sbjct: 278 LWNLTDLSEVSGEEGKKEFADEIKEEMEKCGQVVNVIVH--VDESQEEDRQVRVFVEFTN 335
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+ Q KA + ++GRFFGGR V A F + ++ E
Sbjct: 336 NAQAIKAFVMMNGRFFGGRSVSAGFQNVSDYNNREF 371
>gi|195116165|ref|XP_002002626.1| GI11727 [Drosophila mojavensis]
gi|193913201|gb|EDW12068.1| GI11727 [Drosophila mojavensis]
Length = 438
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 73/100 (73%), Gaps = 7/100 (7%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEI--TEPNFPVDEAVRIFV 330
P++V+LLRNMVGPG+VD+ELE EV EC KYG V V+I E T P ++AV+IFV
Sbjct: 342 PSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHEAFGTVP----EDAVKIFV 397
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+F+R E KA++DL+GRFFGGR VRA FY+ ++F +L
Sbjct: 398 EFKRIESAIKAVVDLNGRFFGGRQVRAGFYNFDKFKSFQL 437
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 117/288 (40%), Gaps = 58/288 (20%)
Query: 5 LYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQT---ILKPQSKPKTTQ 61
LY D+ + KP + WSS KM L + P+ I KP P
Sbjct: 3 LYDDI-----DAKPRASQMDGWSSGIKMLQTQLAVKKAQLPKPKARDPIKKPLMTPVVNL 57
Query: 62 NSLPTRPHSS-----PAIAPSPDDAAALPQPALVGVTST----VIEEYDPARPNDYEDYR 112
+ T S A+ P+ P P ++ T ++EYDP PN+YE +
Sbjct: 58 RAKRTSDADSFVPVTVAVKPTITSTTVAPAPPVLDSIKTDDWDFVDEYDPQWPNEYEKLK 117
Query: 113 -----REKKKKAVDAEIRREL-----------ERRRQEGEERERREREERENA------S 150
+K + + + R E +R R G RR+ +N+ S
Sbjct: 118 DKSKSNDKSRNSGGSASRGEDRDRDRDRDRDRKRNRGSG----RRDTHNHDNSPPSMKFS 173
Query: 151 ASRLNMSGEEAWKRRAAMS---SGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLG 207
S E+ + A S GG +P PP ++++SG G TI S +S
Sbjct: 174 GFSQRQSDEDRYSPPAPGSVSKQGGGAAIAP-PPSLSIDSGDGSSNVTIPYSASS----- 227
Query: 208 AGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVN 255
A ++MAK G+K+GQGLG+ EQG++ L KT +R G I++
Sbjct: 228 ------VAAKIMAKYGFKDGQGLGKSEQGMSVALQVEKTSKRGGRIIH 269
>gi|268536454|ref|XP_002633362.1| Hypothetical protein CBG06106 [Caenorhabditis briggsae]
Length = 371
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 166/377 (44%), Gaps = 42/377 (11%)
Query: 10 PPPSDEDKPTNTTTTVWSSS------AKMAPPTLRKPSSIFAPPQTI-LKPQSKPKTTQN 62
PPP+ + KP + + S A + +K APP I L ++KP TT
Sbjct: 13 PPPAKQAKPMHNIQMAFMQSQLAQRKAALQQQARQKLIKSSAPPPVIDLSARNKPMTTAA 72
Query: 63 SLPTRPHSSPAIAPSP--DDAAALPQPA-----LVGVTSTVIEEYDPARPNDYEDYRREK 115
+ P + I +P ++ + LP+ A ++ + EY P PN++E +E
Sbjct: 73 T----PKTFQPIRANPVAENISFLPKAATDESVMIFGEEHIKCEYFPMTPNNFEILAKEL 128
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGE-EAWKRRAAMSSGGVP 174
+ + RE+ +R Q E E ++R + + M E E K + + P
Sbjct: 129 NDRKQREKNAREIAKRLQREHEEEDKKRSMGAAIAPPTMLMEPEPEVVKEKDDIPEDK-P 187
Query: 175 PRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQE 234
S PPP + + GKS + GLG+ A +M K G++EGQGLG+ E
Sbjct: 188 QSSFMPPPSFLPA--------FGKSTSRGLGIAAN--------IMKKHGYREGQGLGKSE 231
Query: 235 QGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD---- 290
QG++T L + R G IV S S T++L L N+ GEV
Sbjct: 232 QGMSTALQVERVGARTGNIVGESPRVPSFAANSTEAVNNATKILQLWNLTDVGEVSGEEG 291
Query: 291 -DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRF 349
E E+ E K G V V++ ++E VR+FV+F + Q KA + ++GRF
Sbjct: 292 KKEFASEIKEEMEKCGQVVEVIV-HVSENEEDESRRVRVFVEFPTNAQAIKAFVMMNGRF 350
Query: 350 FGGRVVRATFYDEERFS 366
FGGR V A F + + ++
Sbjct: 351 FGGRSVGAGFQNVDDYN 367
>gi|350646433|emb|CCD58930.1| fuse-binding protein-interacting repressor siahbp1, putative
[Schistosoma mansoni]
Length = 522
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
F +RVLLL NMVG EVDDEL++EV EC YG+V RVLI +T + VRIF
Sbjct: 426 FTISMSRVLLLENMVGVNEVDDELQEEVMEECGNYGSVLRVLIHIMTSQD------VRIF 479
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+QF+RS+ A L+ R+F GRVV+A YDEERF +EL
Sbjct: 480 IQFDRSDDAKAACCALNQRYFAGRVVQARLYDEERFQLHEL 520
>gi|341902315|gb|EGT58250.1| hypothetical protein CAEBREN_28335 [Caenorhabditis brenneri]
Length = 370
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 42/283 (14%)
Query: 99 EYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSG 158
EY P PN++E +E + + R++ +R Q E E ++R + + +
Sbjct: 114 EYYPMTPNNFELLAKELHDRKQREKTARDVAKRLQREHEEEDKKRSMGAAIAPPTMLIEP 173
Query: 159 EEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
E + SS P S PPP + + GK+ + GLG+ A +
Sbjct: 174 EPVINTQD--SSEEKPQSSYMPPPSFLPA--------FGKATSRGLGVAAN--------I 215
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVL 278
M K G++EGQGLG+ EQG++T L KT R G IV + S+ T++L
Sbjct: 216 MKKHGYREGQGLGKSEQGMSTALQVEKTGVRGGNIVAETPKAPTFAQNSMEAIQSSTKIL 275
Query: 279 LLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA------VR 327
L N+ EV D+ DE+ E K GTV V++ VDE+ VR
Sbjct: 276 QLSNLTEVDEVKDDEGKQSFADEIKEEMEKCGTVVNVIVH--------VDESQDEERQVR 327
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATF-----YDEERF 365
+FV+F EQ KA + ++GRFFGGR V A F Y+ +F
Sbjct: 328 VFVEFMTKEQAIKAFVMMNGRFFGGRSVSAGFQNIDDYNSRKF 370
>gi|256073105|ref|XP_002572873.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 534
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
F +RVLLL NMVG EVDDEL++EV EC YG+V RVLI +T + VRIF
Sbjct: 438 FTISMSRVLLLENMVGVNEVDDELQEEVMEECGNYGSVLRVLIHIMTSQD------VRIF 491
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+QF+RS+ A L+ R+F GRVV+A YDEERF +EL
Sbjct: 492 IQFDRSDDAKAACCALNQRYFAGRVVQARLYDEERFQLHEL 532
>gi|170087212|ref|XP_001874829.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650029|gb|EDR14270.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 624
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 99/183 (54%), Gaps = 29/183 (15%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGV---------------------- 252
A R+MAK G KEGQGLG GI L + + GV
Sbjct: 440 AARLMAKWGHKEGQGLGADGTGIVNALTVEQVSQVKGVKGKPVKAQGHGGSSGKGLKVGS 499
Query: 253 ----IVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDD-ELEDEVGSECAKYGTV 307
I+N +E+ + + F G P+RV++L NMVG +VDD +L +E+G EC+K GTV
Sbjct: 500 KMGKIINNNEDAKTRDDRE-RF-GDPSRVVVLTNMVGMEDVDDGDLREEIGDECSKNGTV 557
Query: 308 TRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
RV++ + P D+AVRIFV F K + +LDGR+FGGR VRA ++ E+RF +
Sbjct: 558 ERVVVHPVYPPPPNPDDAVRIFVLFAGPAGAWKTVRELDGRYFGGRSVRARYFPEQRFHR 617
Query: 368 NEL 370
++L
Sbjct: 618 SDL 620
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 55/138 (39%)
Query: 97 IEEYDPARPNDYEDYRREKKKKAVD-----AEIRRELERRR-----------QEGEERER 140
+E+YDP RPNDY +YR ++K ++ AE RR ER+R + G E +
Sbjct: 191 MEQYDPLRPNDYNEYRVWRQKDRIERRERLAEQRRMEERKRSRRSASYSDSEETGSEEDS 250
Query: 141 RER----------------EERENASASRL------------NMSGEEAWKRRAAMSSGG 172
R R EER A+ S N++G+EA++RR AMS+
Sbjct: 251 RPRKAGRFHESFDHWSRADEERAGAAHSSAIGQPLPVAPIERNLTGDEAFQRRLAMSA-- 308
Query: 173 VPP---------RSPSPP 181
+PP SPSPP
Sbjct: 309 IPPVSTPPTAPFASPSPP 326
>gi|76155513|gb|AAX26804.2| SJCHGC01849 protein [Schistosoma japonicum]
Length = 239
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 6/101 (5%)
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
F +RVLLL NMVG EVDDEL++EV EC YG+V RVLI +T ++ VRIF
Sbjct: 143 FTISMSRVLLLENMVGVNEVDDELQEEVMEECGNYGSVLRVLIHIMT------NQDVRIF 196
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+QF+RS+ A L+ R+F GRVV+A YDEERF +EL
Sbjct: 197 IQFDRSDDAKAACSALNQRYFAGRVVQARLYDEERFQLHEL 237
>gi|395330244|gb|EJF62628.1| hypothetical protein DICSQDRAFT_135591 [Dichomitus squalens
LYAD-421 SS1]
Length = 525
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR----------------------RAGV 252
A R+MAK G K+GQGLG GI L + + + G
Sbjct: 345 AARLMAKWGHKDGQGLGVDGSGIVHALTVEQVAQNKSGKGKAKGGKGSTAIGGIPSKMGK 404
Query: 253 IVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDE-LEDEVGSECAKYGTVTRVL 311
IVN +E+ ++ + F G P+RV++L NMVG +V+DE L +E+G EC+K GTV RV+
Sbjct: 405 IVNMNEDAKTREDRE-RF-GEPSRVVVLTNMVGLEDVEDEDLREEIGEECSKNGTVERVV 462
Query: 312 IFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+ + D+AVRIFV F K + +LDGR+FGGR VRA ++ E +F+ EL
Sbjct: 463 VHAVYPQPEHADDAVRIFVLFAGPVGAWKTVRELDGRYFGGRSVRARYFPEAQFNAAEL 521
>gi|430814554|emb|CCJ28228.1| unnamed protein product [Pneumocystis jirovecii]
Length = 456
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 5/157 (3%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVN 269
GQ A+R+M K GW++G+GLG GI PL+ + + R G ++N+S +K
Sbjct: 297 GQKKFAERLMKKYGWEKGKGLGASNDGIVNPLVVKHSKDRKGTGSIINKNRSYEKTGKF- 355
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAK-YGTVTRVLIFEITEPNFPVDEAVRI 328
G ++V+LL N+ +DD+L E+G EC K YG V R +++ + D VR+
Sbjct: 356 --GKMSKVILLTNVSELETLDDDLSQEIGDECNKSYGKVERCFVYKNINSSLTSD-IVRV 412
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
FV F + +A+ LDGR FGG+ + FYD ++F
Sbjct: 413 FVLFTDAISALRAVNALDGRLFGGKEINVRFYDIDKF 449
>gi|389749111|gb|EIM90288.1| hypothetical protein STEHIDRAFT_137758 [Stereum hirsutum FP-91666
SS1]
Length = 663
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 97/191 (50%), Gaps = 37/191 (19%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRRAGV-------------------- 252
A RMMAK G KEGQGLG GI L K ++ G
Sbjct: 470 AARMMAKWGHKEGQGLGADGSGIVHALTVEQVKAGKQKGNKSVQEAPMAPQKGKAKGMGM 529
Query: 253 ------------IVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDE-LEDEVGS 299
IVNA+E+ ++ + F G P+RV+LL NMVGP + DD+ L E+G
Sbjct: 530 GAAGAGAGGMGRIVNANEDAKTREDRE-RF-GDPSRVVLLLNMVGPEDADDDDLPGEIGE 587
Query: 300 ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
EC+K GTV RV++ + P ++AVRIFV F+ K + +LDGR+FGGR VRA +
Sbjct: 588 ECSKNGTVERVIVHLVQPPPQNPEDAVRIFVLFKGPAGAWKTVRELDGRYFGGRTVRARY 647
Query: 360 YDEERFSKNEL 370
+ E F + L
Sbjct: 648 FPERAFGQGLL 658
>gi|324513162|gb|ADY45418.1| Splicing factor 45 [Ascaris suum]
Length = 418
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 123/279 (44%), Gaps = 61/279 (21%)
Query: 96 VIEEYDPARPNDYEDYRRE----KKKKAVDAEIRRELERRRQEGEERERREREERENASA 151
V +EY+P P DY +++++ K K+ + EI L R QE E +R +A
Sbjct: 108 VEDEYNPTAPTDYAEHKQKLDERKAKEKIAKEIADRLHREHQE-------ELAKRSAGAA 160
Query: 152 SRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQ 211
+ EA R S PPP V S F IGK GLG+ A
Sbjct: 161 IAPPQALMEADSRVEPDVSSSSSSTKEMPPPSFVPS------FGIGK----GLGVAAN-- 208
Query: 212 MTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVK----- 266
+M K G+KEG GLGR QG++T L + + AGVIVN E +
Sbjct: 209 ------IMTKFGYKEGAGLGRAGQGMSTALKVERLGKNAGVIVNEHEQNARAAAAAAAAA 262
Query: 267 ----------------------SVNFN---GPPTRVLLLRNMVGPGEVDDELEDEVGSEC 301
+VN TR+L+L+NMV P E+DD+LE EV E
Sbjct: 263 AASESSTSSSVPAPVPQSVPPPAVNMTEALKTATRILMLQNMVSPEEIDDQLEPEVKDEM 322
Query: 302 AKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTK 340
KYG V +VLI+ + + +EAVRIFV+F Q +
Sbjct: 323 KKYGQVNKVLIYRLLHAS--DEEAVRIFVEFTNVAQAIR 359
>gi|392567604|gb|EIW60779.1| hypothetical protein TRAVEDRAFT_146453 [Trametes versicolor
FP-101664 SS1]
Length = 590
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 95/189 (50%), Gaps = 33/189 (17%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR--------------------AGVIV 254
A R+MAK G KEGQGLG GI L + + AG
Sbjct: 398 AARLMAKWGHKEGQGLGVDGTGIVHALTVEQVAQGKNGGKGKGNKGKGKGKGSVPAGPPA 457
Query: 255 NASENKSEKKVKSVNFN------------GPPTRVLLLRNMVGPGEVDDE-LEDEVGSEC 301
+ + K K VN N G P+RV++L NMVG +V+DE L +++G EC
Sbjct: 458 IGAAPNAAKMGKIVNRNEDAKGREDRERFGEPSRVVVLTNMVGLEDVEDEELREDIGDEC 517
Query: 302 AKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
+K GTV RV++ + P +EAVRIFV F K + +LDGR+FGGR VRA ++
Sbjct: 518 SKNGTVERVIVHAVYPPQENPEEAVRIFVLFGGPVGAWKTVRELDGRYFGGRSVRARYFP 577
Query: 362 EERFSKNEL 370
E +F+ +L
Sbjct: 578 EAQFNAADL 586
>gi|308491150|ref|XP_003107766.1| hypothetical protein CRE_12801 [Caenorhabditis remanei]
gi|308249713|gb|EFO93665.1| hypothetical protein CRE_12801 [Caenorhabditis remanei]
Length = 369
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 160/370 (43%), Gaps = 37/370 (10%)
Query: 8 DLP--PPSDEDKPT-NTTTTVWSSSAKMAPPTL----RKPSSIFAPPQTILKPQSKPKTT 60
D+P PP+ + KP NT S L R+ APP ++ ++ +
Sbjct: 8 DVPMGPPAKQAKPMLNTQMAFLQSQLAQKKAALQQKARQTVKSSAPPPPVIDLSARNRPL 67
Query: 61 QNSLPTRPHSSPAIAPSPDDAAALPQPA-----LVGVTSTVIEEYDPARPNDYEDYRREK 115
+++ +P P ++ + LP+ A ++ + EY P PN++E +E
Sbjct: 68 SSAVTPKPFQPIRANPVTENISFLPKAATDESVMIFGEEHIKCEYYPMVPNNFEVLAKEI 127
Query: 116 KKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGE-EAWKRRAAMSSGGVP 174
+ + RE+ +R Q E E ++R + + + + E E K +
Sbjct: 128 NDRKQREKTAREVAKRLQREHEEEDKKRSKGAAIAPPTMLIEPEPEVIKINDEVQEDK-- 185
Query: 175 PRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQE 234
P+ PP + + GK+ + GLG+ A +M K G++EGQGLG+ E
Sbjct: 186 PQPSFKPPSFLPA--------FGKATSRGLGIAAN--------IMKKHGYREGQGLGKSE 229
Query: 235 QGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDD--- 291
QG++T L K RAG IV + S+ T+VL L N+ EV +
Sbjct: 230 QGMSTALQVEKVGVRAGNIVGETPKAPTFATNSMEAVQNATKVLQLWNLTEVSEVSNEDG 289
Query: 292 --ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRF 349
E DE+ E K G V V++ + VR+FV+F S Q KA + ++GRF
Sbjct: 290 KKEFADEIKEEMEKCGQVVNVIV-HVNGSEEEEGRRVRVFVEFTNSAQAIKAFVMMNGRF 348
Query: 350 FGGRVVRATF 359
FGGR V A F
Sbjct: 349 FGGRSVTAGF 358
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 69/104 (66%)
Query: 262 EKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
+K + G +R ++L++M GP +VDDELE E+ E KYG V RV+I++ + P
Sbjct: 585 QKLARGTITGGKSSRCVVLKDMAGPEDVDDELEGEITDEATKYGIVERVVIYQERQSEKP 644
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
D ++IF+ F+ ++Q KAL L+GR+FGGR ++A FYDE++F
Sbjct: 645 GDVIIKIFILFQSADQAQKALTSLNGRWFGGRQIKAAFYDEKKF 688
>gi|444724401|gb|ELW65006.1| Splicing factor 45 [Tupaia chinensis]
Length = 510
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 5/107 (4%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKSEKKVKS--- 267
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +A+E + KK S
Sbjct: 296 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSDSNPL 355
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE 314
PT+V+LLRNMVG GEVD++LE E EC KYG V + +IFE
Sbjct: 356 TEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFE 402
>gi|321251537|ref|XP_003192098.1| hypothetical protein CGB_B3280W [Cryptococcus gattii WM276]
gi|317458566|gb|ADV20311.1| Hypothetical protein CGB_B3280W [Cryptococcus gattii WM276]
Length = 628
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 97/191 (50%), Gaps = 36/191 (18%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGI----TTPLMARKTDRRA------------------ 250
T A++MM K G EG GLG + +GI TT +A T+
Sbjct: 434 TFAEKMMRKWGHVEGSGLGARGEGIVHALTTEHVAPITNLSQPQSKRALAKQKAAAANAK 493
Query: 251 -----------GVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGP-GEVDDELEDEVG 298
G IVN ENK E+ + G RV+ LR +VG E+D+EL +E+G
Sbjct: 494 SRKWVQAPSARGRIVN--ENKDERAKEEKQRMGEEGRVICLRGLVGSVEEIDEELVNEIG 551
Query: 299 SECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
EC+ YG V RV++ + P +E +R+FV F +A+ +LDGRFFGGR ++AT
Sbjct: 552 EECSNYGIVERVVLHLVEPPPPEPEECLRVFVVFSGMAGAWRAIKELDGRFFGGRNIKAT 611
Query: 359 FYDEERFSKNE 369
++DE RF K +
Sbjct: 612 YFDETRFDKGD 622
>gi|307106476|gb|EFN54722.1| hypothetical protein CHLNCDRAFT_135411 [Chlorella variabilis]
Length = 69
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%)
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFE+TEP FP D++VRIFVQFER E+ TKAL+DL GRFFGGR V+A F++EERF K EL
Sbjct: 1 MIFEVTEPGFPSDQSVRIFVQFERVEEATKALVDLQGRFFGGREVKAQFFEEERFEKLEL 60
Query: 371 APLPGEI 377
AP P E+
Sbjct: 61 APRPEEV 67
>gi|358335955|dbj|GAA54545.1| poly(U)-binding-splicing factor PUF60 [Clonorchis sinensis]
Length = 511
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 273 PPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 332
PP +L+LRNMVGP + DDELE+EV EC YG+V RV+I++ + N + ++IFV F
Sbjct: 414 PPRGILILRNMVGPDDCDDELENEVKEECCNYGSVDRVIIYQELDENGEL--IIKIFVVF 471
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+ SE +A+ L+GR+F GR V A YD E+F N+L
Sbjct: 472 QDSESVDRAIASLNGRYFAGRQVVAEPYDLEKFEANDL 509
>gi|358339509|dbj|GAA27913.2| poly(U)-binding-splicing factor PUF60-B [Clonorchis sinensis]
Length = 512
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF 313
++ +E KSE + F P +RVLLL NMV EVD +LE EV EC+ +G V RV +
Sbjct: 403 LHENEEKSED-TSTFLFEAPLSRVLLLENMVSAEEVDADLEGEVAEECSNFGHVLRVFVH 461
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V VRIFV F+RS+ A L+ RFF GRVV A YDEERF +E
Sbjct: 462 --------VRSDVRIFVHFDRSDSAQAACESLNQRFFAGRVVHAKLYDEERFQLHEF 510
>gi|403169529|ref|XP_003328978.2| hypothetical protein PGTG_10718 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168304|gb|EFP84559.2| hypothetical protein PGTG_10718 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 879
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 95/195 (48%), Gaps = 42/195 (21%)
Query: 208 AGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------------RKTD-------- 247
A GQ A+R+M K GWKEGQGLG E G T+ L RK +
Sbjct: 685 APGQPDFARRLMDKYGWKEGQGLGANESGRTSILTVAAGSSGPGGNKKRKENPGDSAMAG 744
Query: 248 -----------RRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDE 296
+ GV+++ + KS++ ++ G PTR++ L N+V EVDDEL E
Sbjct: 745 PTGPHKIGSMAKGRGVVID--DAKSQRDLEEKIRYGEPTRIVYLTNVVAVDEVDDELATE 802
Query: 297 VGSECAKYGTVTRVLIF-----EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFG 351
+ E K+G V R + +I +P+ E VR+F+ + KA+ DGRFFG
Sbjct: 803 IAEEARKHGIVERCFVRIVQREDIDDPS----EKVRVFILYSGLVGAWKAVKTFDGRFFG 858
Query: 352 GRVVRATFYDEERFS 366
GR +RA F+ E F+
Sbjct: 859 GRNIRARFFSENSFT 873
>gi|358055399|dbj|GAA98519.1| hypothetical protein E5Q_05205 [Mixia osmundae IAM 14324]
Length = 645
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 34/183 (18%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMA---------RKTDRRA--------------- 250
A +M+K GW+EGQGLG G+ PL A +R+
Sbjct: 458 AASLMSKWGWREGQGLGVDNAGMLKPLQAVSHHEEPSGNAKNRKGKPTEATEQPQHQNSM 517
Query: 251 -----GVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYG 305
G IV S++ S++K + G PT V+LL N+VG +VDD+L E+ E K G
Sbjct: 518 AGKGRGTIV--SDHLSQQKREEREKFGEPTPVVLLTNLVGRDDVDDDLTGEIAEEARKGG 575
Query: 306 TVTRVLIF---EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
V R L+ ++T P ++ VR+FV F A+ DGRFFGGR V+A FY++
Sbjct: 576 IVERCLVHLMPQLTAQPLPDEDQVRVFVLFSGLVGAFNAVRSFDGRFFGGRTVKARFYNQ 635
Query: 363 ERF 365
F
Sbjct: 636 AAF 638
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+RV +L+NMVGP EVDD+L+ +V EC+KYG V +V+I+ TE D A V+IFV+
Sbjct: 540 SRVCVLKNMVGPDEVDDDLQQDVTDECSKYGEVVKVVIY--TEQQGEDDNAEHIVKIFVE 597
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F+ S+Q K + L+GR+FGGR V+A YD+ + ++L+
Sbjct: 598 FQTSKQAEKTVESLNGRYFGGRAVKAELYDQTAYQADDLS 637
>gi|145507003|ref|XP_001439462.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406646|emb|CAK72065.1| unnamed protein product [Paramecium tetraurelia]
Length = 334
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 114/276 (41%), Gaps = 74/276 (26%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMS 157
+EYDP+RPNDYE E++R++ + + E+
Sbjct: 118 QEYDPSRPNDYE-------------ELKRQMNQSETQNEQ-------------------- 144
Query: 158 GEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQR 217
P P + E+ +G E L +
Sbjct: 145 --------------------PQPQQIEEETEPSYDEVELGSGEEKAL------------K 172
Query: 218 MMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNF------- 270
MM K G+K G GLG+ QGI P+ KT GVI +S + ++ ++V F
Sbjct: 173 MMEKFGYKFGLGLGKYNQGIQNPIEVIKTSNSVGVIEVSSLDFTDLLPQNVVFRKTFEQH 232
Query: 271 NGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
PT +L+L N + +VD+ +D++ +E KYG + ++ + + D VR+F+
Sbjct: 233 KQQPTNILVLLNAITAKDVDEYFKDDIKAELGKYGYIKKIHVH--IKAELEEDMQVRVFI 290
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++ +E+ A + D R FGGR++ FY E F+
Sbjct: 291 EYANNEEAMAAFLAADQRVFGGRIMTCRFYSIENFN 326
>gi|58258549|ref|XP_566687.1| hypothetical protein CNA02820 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222824|gb|AAW40868.1| hypothetical protein CNA02820 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 622
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 94/194 (48%), Gaps = 36/194 (18%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRA------------------- 250
G T A++MM K G EG GLG + +GI L A
Sbjct: 425 GGGTFAEKMMRKWGHVEGTGLGARGEGIVHALTTEHVAPVANLSQPLSKRALAKQKAAAA 484
Query: 251 --------------GVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGP-GEVDDELED 295
G IVN +NK E+ + G RV+ LR +VG E+D+EL +
Sbjct: 485 NAKSRKWVQAPSARGRIVN--DNKDERAKEEKERKGEEGRVICLRGLVGSVEEIDEELVN 542
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E+G EC+ YG V RV++ + P +E +R+FV F +A+ +LDGRFFGGR +
Sbjct: 543 EIGEECSNYGIVERVVLHLVEPPPPEPEECLRVFVVFSGMAGAWRAIKELDGRFFGGRNI 602
Query: 356 RATFYDEERFSKNE 369
+AT++DE RF K +
Sbjct: 603 KATYFDETRFDKGD 616
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC K+GTV+RV+IF E N DEA V+IFV
Sbjct: 510 SRVIILRNMVGPEDVDETLQEEIQEECTKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 569
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F S + + L+GRFFGGR V A YD+ F +L+
Sbjct: 570 EFSSSAEAVRGKEALNGRFFGGRRVHAELYDQSLFDHGDLS 610
>gi|346468399|gb|AEO34044.1| hypothetical protein [Amblyomma maculatum]
Length = 577
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEAVRIFVQFERS 335
V++LRNMVG ++DDELE EV EC ++GTV RV+I+ E + D V+IFV+F ++
Sbjct: 481 VVVLRNMVGVEDLDDELESEVTDECGRFGTVKRVIIYQERQSEDENADIVVKIFVEFSQA 540
Query: 336 EQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+++ A L+GRFFGGR+V+A YD+ + N+L+
Sbjct: 541 QESASARDALNGRFFGGRIVKAELYDQTLYEANDLS 576
>gi|294942468|ref|XP_002783539.1| RNA binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239896036|gb|EER15335.1| RNA binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 190
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 88/172 (51%), Gaps = 24/172 (13%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGV-----------IVNASENKS 261
+A +++ KMGW EGQGLG Q QGIT PL+ +K D G IV K
Sbjct: 21 SAGSKLLKKMGWTEGQGLGVQNQGITAPLIHKKIDATQGKIEIGKISVRIEIVGDDRIKV 80
Query: 262 EKKVKSVNFNGPPT------RVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEI 315
+K + PPT R++LL+NMV GEVD++L+++V EC YGTV
Sbjct: 81 QKILPPSIGQSPPTPSEVESRIMLLKNMVDKGEVDEDLQEDVKEECETYGTVE------- 133
Query: 316 TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V + VR+FV F + KA + GR F + + A +YDE+++ K
Sbjct: 134 EVKVVEVGDEVRVFVVFADVTASQKAKKIMHGRTFDQKRIDARYYDEDKYKK 185
>gi|224163213|ref|XP_002338533.1| predicted protein [Populus trichocarpa]
gi|222872662|gb|EEF09793.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 47/50 (94%)
Query: 212 MTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKS 261
MTAAQRMMAKMGWKEGQGLG+QEQGIT PLMA+KTDRRA VIVNASE K+
Sbjct: 1 MTAAQRMMAKMGWKEGQGLGKQEQGITMPLMAKKTDRRAAVIVNASEKKA 50
>gi|336367093|gb|EGN95438.1| hypothetical protein SERLA73DRAFT_162316 [Serpula lacrymans var.
lacrymans S7.3]
Length = 694
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 24/178 (13%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLM-----ARKTDR----------------RAGVI 253
A R+MAK G KEGQGLG GI L A KT + + G I
Sbjct: 514 AARLMAKWGHKEGQGLGADGGGIVNALTVEQVAAGKTGKGNSNAGKGGKGSGPGVKMGKI 573
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDE-LEDEVGSECAKYGTVTRVLI 312
+N +E+ ++ ++ F G P+RV++L NMVG +V+DE L E+G EC+K GTV RV++
Sbjct: 574 INNNEDAKSREDRT-RF-GEPSRVVVLTNMVGEEDVEDEDLRGEIGDECSKNGTVERVIV 631
Query: 313 FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+ P ++AVRIFV F + + +LDGR+FGGR VRA +Y E F ++ L
Sbjct: 632 HLVHPPTPDPEDAVRIFVLFAGPAGAWRTVRELDGRYFGGRSVRARYYSEAYFREHNL 689
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 81/216 (37%), Gaps = 63/216 (29%)
Query: 19 TNTTTTVWSSSAKMA-PPTLRKPSSIFAPPQTILKPQSKPKTTQNSLPTRPHSS------ 71
T T++ S +A +A PPTL + +FAPPQ I K T PT
Sbjct: 114 TAITSSAMSHTATVAAPPTLSATAVVFAPPQLITSTGDKDAPTSKDTPTTADQKGSQQGQ 173
Query: 72 --------PAIAPSPD---------------DAAALPQPALVGVTSTVIEEYDPARPNDY 108
P++ D + A V +E YDP RPNDY
Sbjct: 174 GWGKRMKPPSMVLDEDINGFKKRSGGGKKGGGKKKKAKNAPVVAVWDPLEPYDPLRPNDY 233
Query: 109 EDYRREKKKKAVDAEIRRELERRRQ------------EGEERERREREERE------NAS 150
+Y+ K+++ + + R +R R+ EG + RE+ E + S
Sbjct: 234 NEYKVWKQRERTEKAVERARKRTRRGSSYTDSGGSGSEGRFDDHWSREDDEPLRPSADLS 293
Query: 151 ASR---------------LNMSGEEAWKRRAAMSSG 171
S N+SGEEA++RR A+S+
Sbjct: 294 TSMGYADTAPTQPPVLVDRNLSGEEAFQRRLALSAA 329
>gi|328769065|gb|EGF79110.1| hypothetical protein BATDEDRAFT_90160 [Batrachochytrium
dendrobatidis JAM81]
Length = 330
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%)
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
N PT+V++L N+VG EVDDEL E ECAK+G V ++E+ + P DEAVR+F
Sbjct: 228 INSNPTQVVVLTNLVGKSEVDDELRRETTEECAKFGKVIECSVYEVPGSHVPDDEAVRVF 287
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFY 360
V+F KA D+ GRFFGGR V A F+
Sbjct: 288 VEFADLNAAIKAQADMHGRFFGGRKVTAGFW 318
>gi|270001539|gb|EEZ97986.1| hypothetical protein TcasGA2_TC000381 [Tribolium castaneum]
Length = 591
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF--EITEPNFPVDEAVRIFVQF 332
++V++LRNMVGP +VD+ L++E+ EC+K+GTV RV+I+ + +E + D V+IFV+F
Sbjct: 492 SKVVILRNMVGPEDVDETLQEEIQEECSKFGTVERVIIYNEKQSEEDDASDVVVKIFVEF 551
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + KA L+GR+FGGR+V+A+ YD+ F ++ +
Sbjct: 552 TETPEAEKARDALNGRYFGGRMVQASLYDQTLFDHSDFS 590
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDE----AVRI 328
++V++LRNMVGP +VD+ L++E+ EC+KYG V RV+I++ +E NF D+ V+I
Sbjct: 540 SKVVILRNMVGPEDVDETLQEEIQDECSKYGAVDRVIIYKERQSEGNFAEDDNTDMIVKI 599
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
FV+F ++ + +A L+GR+FGGR+V+A YD+ F +L+
Sbjct: 600 FVEFSQATEADRARESLNGRYFGGRLVKAESYDQALFDHGDLS 642
>gi|189234753|ref|XP_974490.2| PREDICTED: similar to STE20-like kinase (yeast) [Tribolium
castaneum]
Length = 1819
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF--EITEPNFPVDEAVRIFVQF 332
++V++LRNMVGP +VD+ L++E+ EC+K+GTV RV+I+ + +E + D V+IFV+F
Sbjct: 449 SKVVILRNMVGPEDVDETLQEEIQEECSKFGTVERVIIYNEKQSEEDDASDVVVKIFVEF 508
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + KA L+GR+FGGR+V+A+ YD+ F +++
Sbjct: 509 TETPEAEKARDALNGRYFGGRMVQASLYDQTLFDHTKMS 547
>gi|114051121|ref|NP_001039598.1| poly(U)-binding-splicing factor PUF60 [Bos taurus]
gi|122144872|sp|Q2HJG2.1|PUF60_BOVIN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|88682957|gb|AAI05448.1| Poly-U binding splicing factor 60KDa [Bos taurus]
Length = 530
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 432 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 489
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ DL+GR+F GR V A YD+ERF ++L+
Sbjct: 490 FSVASETHKAIQDLNGRWFAGRKVVAEVYDQERFDNSDLS 529
>gi|5524727|gb|AAD44358.1|AF165892_1 RNA-binding protein SiahBP [Rattus norvegicus]
Length = 565
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 467 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 524
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+FGGR V A YD+ERF ++L+
Sbjct: 525 FSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 564
>gi|74203983|dbj|BAE28998.1| unnamed protein product [Mus musculus]
Length = 564
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 466 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 523
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+FGGR V A YD+ERF ++L+
Sbjct: 524 FSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 563
>gi|257196183|ref|NP_082640.2| poly(U)-binding-splicing factor PUF60 isoform a [Mus musculus]
gi|158563798|sp|Q3UEB3.2|PUF60_MOUSE RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|158563997|sp|Q9WV25.2|PUF60_RAT RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=RNA-binding protein Siah-BP; AltName:
Full=Siah-binding protein 1
gi|148697573|gb|EDL29520.1| RIKEN cDNA 2410104I19, isoform CRA_a [Mus musculus]
gi|149066142|gb|EDM16015.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_a [Rattus norvegicus]
Length = 564
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 466 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 523
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+FGGR V A YD+ERF ++L+
Sbjct: 524 FSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 563
>gi|76677895|ref|NP_598452.2| poly(U)-binding-splicing factor PUF60 isoform b [Mus musculus]
gi|74195824|dbj|BAE30474.1| unnamed protein product [Mus musculus]
gi|74221976|dbj|BAE40622.1| unnamed protein product [Mus musculus]
gi|148697574|gb|EDL29521.1| RIKEN cDNA 2410104I19, isoform CRA_b [Mus musculus]
gi|149066143|gb|EDM16016.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_b [Rattus norvegicus]
Length = 547
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 449 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 506
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+FGGR V A YD+ERF ++L+
Sbjct: 507 FSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 546
>gi|148697575|gb|EDL29522.1| RIKEN cDNA 2410104I19, isoform CRA_c [Mus musculus]
Length = 546
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 448 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 505
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+FGGR V A YD+ERF ++L+
Sbjct: 506 FSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 545
>gi|300798352|ref|NP_001178809.1| poly(U)-binding-splicing factor PUF60 [Rattus norvegicus]
Length = 563
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 465 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 522
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+FGGR V A YD+ERF ++L+
Sbjct: 523 FSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 562
>gi|432929636|ref|XP_004081203.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 526
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFE 333
+ V++LRNMVGP ++DD+LE EV EC K+GTV RV+I++ + D V+IFV+F
Sbjct: 428 STVMVLRNMVGPEDIDDDLEGEVTEECGKFGTVNRVIIYQEKQGEEEDADIIVKIFVEFS 487
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + KA+ L+ R+FGGR V A YD++RF+ ++L+
Sbjct: 488 AASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLS 525
>gi|148697576|gb|EDL29523.1| RIKEN cDNA 2410104I19, isoform CRA_d [Mus musculus]
Length = 553
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 455 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 512
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+FGGR V A YD+ERF ++L+
Sbjct: 513 FSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 552
>gi|351698432|gb|EHB01351.1| Poly(U)-binding-splicing factor PUF60, partial [Heterocephalus
glaber]
Length = 556
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E D+A V+IFV+
Sbjct: 458 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEDDAEIIVKIFVE 515
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 516 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 555
>gi|428182175|gb|EKX51036.1| hypothetical protein GUITHDRAFT_134574 [Guillardia theta CCMP2712]
Length = 458
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
P+RV+LL+NMV P +VD LE E+ EC+K+G V +VLI + E V++FV+F
Sbjct: 363 PSRVVLLKNMVEPEDVDPLLEQEIAEECSKFGKVNKVLIVTMVEQG---SRLVKVFVEFG 419
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
E TKA+ LD R+FGG++V A+ Y+EERF + +L+
Sbjct: 420 DQEAATKAVARLDKRWFGGKIVNASTYEEERFVRQDLS 457
>gi|410909355|ref|XP_003968156.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 526
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFE 333
+ V++LRNMVGP ++DD+LE EV EC K+GTV RV+I++ + D V+IFV+F
Sbjct: 428 STVMVLRNMVGPEDIDDDLEGEVTEECGKFGTVNRVIIYQEKQGEEEDADIIVKIFVEFS 487
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + KA+ L+ R+FGGR V A YD++RF+ ++L+
Sbjct: 488 AASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLS 525
>gi|194864858|ref|XP_001971142.1| GG14596 [Drosophila erecta]
gi|190652925|gb|EDV50168.1| GG14596 [Drosophila erecta]
Length = 731
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 630 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 689
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + LDGRFFGGR V A YD+ F + +L+
Sbjct: 690 EFSAGAEAVRGKEALDGRFFGGRRVVAELYDQGIFDQGDLS 730
>gi|47221195|emb|CAG05516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 520
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFE 333
+ V++LRNMVGP ++DD+LE EV EC K+GTV RV+I++ + D V+IFV+F
Sbjct: 422 STVMVLRNMVGPEDIDDDLEGEVTEECGKFGTVNRVIIYQEKQGEEEDADIIVKIFVEFS 481
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + KA+ L+ R+FGGR V A YD++RF+ ++L+
Sbjct: 482 AASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLS 519
>gi|242021379|ref|XP_002431122.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
gi|212516371|gb|EEB18384.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
Length = 571
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEAVRIFVQFE 333
++V++LRNMV P EVD+ L++E+ EC+KYG V RV+I+ E N D V+IFV+F
Sbjct: 473 SKVIMLRNMVEPQEVDETLQEEIQDECSKYGVVERVIIYNEKQSDNDDSDIIVKIFVEFS 532
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
R+ + A L+GR+FGGR+V+ + YD+ F ++ +
Sbjct: 533 RTSEAESARDALNGRYFGGRLVKCSLYDQVLFDHSDFS 570
>gi|195490418|ref|XP_002093131.1| GE20955 [Drosophila yakuba]
gi|194179232|gb|EDW92843.1| GE20955 [Drosophila yakuba]
Length = 637
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 536 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 595
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + LDGRFFGGR V A YD+ F + +L+
Sbjct: 596 EFSAGAEAVRGKEALDGRFFGGRRVVAELYDQGIFDQGDLS 636
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDE----AVRI 328
++V++LRNMVGP +VD+ L+DE+ EC KYG V RV+I++ +E ++ D+ V+I
Sbjct: 558 SKVVILRNMVGPEDVDETLQDEIQEECGKYGLVERVIIYKERQSEGDYAEDDNTDVIVKI 617
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
FV+F ++ ++ KA L GR+FGGR+V+A YD+ F +L+
Sbjct: 618 FVEFSQTTESDKAREALHGRYFGGRLVKAESYDQALFDHGDLS 660
>gi|257196186|ref|NP_001158072.1| poly(U)-binding-splicing factor PUF60 isoform c [Mus musculus]
gi|14714891|gb|AAH10601.1| Puf60 protein [Mus musculus]
Length = 499
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 401 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 458
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+FGGR V A YD+ERF ++L+
Sbjct: 459 FSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNSDLS 498
>gi|19224321|gb|AAL86452.1|AF479079_1 half pint [Drosophila melanogaster]
Length = 637
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 536 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEADDEAEIIVKIFV 595
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + LDGRFFGGR V A YD+ F + +L+
Sbjct: 596 EFSAGAEAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLS 636
>gi|24655228|ref|NP_525123.2| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
gi|41688713|sp|Q8T6B9.2|PUF68_DROME RecName: Full=Poly(U)-binding-splicing factor half pint;
Short=Protein half pint; AltName: Full=68 kDa
poly(U)-binding-splicing factor; AltName: Full=PUF60
homolog
gi|7292088|gb|AAF47501.1| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
Length = 637
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 536 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 595
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + LDGRFFGGR V A YD+ F + +L+
Sbjct: 596 EFSAGAEAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLS 636
>gi|6118522|gb|AAF04132.1|AF190745_1 poly-U binding splicing factor [Drosophila melanogaster]
Length = 637
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 536 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 595
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + LDGRFFGGR V A YD+ F + +L+
Sbjct: 596 EFSAGAEAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLS 636
>gi|348503274|ref|XP_003439190.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 526
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFE 333
+ V++LRNMVGP ++DD+LE EV EC K+G+V RV+I++ + D V+IFV+F
Sbjct: 428 STVMVLRNMVGPEDIDDDLEGEVTEECGKFGSVNRVIIYQEKQGEEEDADIIVKIFVEFS 487
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + KA+ L+ R+FGGR V A YD++RF+ ++L+
Sbjct: 488 MASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLS 525
>gi|195336594|ref|XP_002034920.1| GM14211 [Drosophila sechellia]
gi|194128013|gb|EDW50056.1| GM14211 [Drosophila sechellia]
Length = 616
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 515 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 574
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + LDGRFFGGR V A YD+ F + +L+
Sbjct: 575 EFSAGAEAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLS 615
>gi|317420076|emb|CBN82112.1| Poly(U)-binding-splicing factor PUF60 [Dicentrarchus labrax]
Length = 513
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFE 333
+ V++LRNMVGP ++DD+LE EV EC K+G+V RV+I++ + D V+IFV+F
Sbjct: 415 STVMVLRNMVGPEDIDDDLEGEVTEECGKFGSVNRVIIYQEKQGEEEDADIIVKIFVEFS 474
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + KA+ L+ R+FGGR V A YD++RF+ ++L+
Sbjct: 475 MASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLS 512
>gi|346970088|gb|EGY13540.1| hypothetical protein VDAG_00222 [Verticillium dahliae VdLs.17]
Length = 507
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 93/200 (46%), Gaps = 48/200 (24%)
Query: 204 LGLGAG------------------GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA-- 243
LGLGAG GQ AQR+M+K GW +G GLG E GI PL
Sbjct: 312 LGLGAGSHTGNRSPDSEAPRSLRPGQAGFAQRLMSKYGWTKGSGLGADESGIINPLRVQV 371
Query: 244 ----RKTDRRAG--------VIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----P 286
+K+D G + + + + S + GP + V++LRNM+
Sbjct: 372 EKRKKKSDAEGGGWRDPANKAKIIGGQRRDDGAASSSGY-GPMSNVIVLRNMLEGMQDLQ 430
Query: 287 GEVDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDL 345
GE+ L E+G EC KYG V R L F++ E ++F++F +A+ +L
Sbjct: 431 GEISSGLGQEIGEECGDKYGRVER-LYFDV--------ENRQVFIKFTDQVSGLRAVSEL 481
Query: 346 DGRFFGGRVVRATFYDEERF 365
+GR F G V ATFYD E+F
Sbjct: 482 NGRVFNGNTVAATFYDSEQF 501
>gi|405117653|gb|AFR92428.1| hypothetical protein CNAG_00294 [Cryptococcus neoformans var.
grubii H99]
Length = 627
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 37/194 (19%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRA------------------- 250
G T A++MM K G EG GLG + +GI L A
Sbjct: 431 GGGTFAEKMMRKWGHVEGTGLGARGEGIVHALTTEHVAPVANLSQPLSKRALAKQKAAAA 490
Query: 251 --------------GVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGP-GEVDDELED 295
G IVN ++++ K+ K + G RV+ LR +VG E+D++L +
Sbjct: 491 NAKSRKWVQAPSARGRIVNENKDERAKEEKEKSEEG---RVICLRGLVGSVEEIDEDLVN 547
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E+G EC+ YG V RV++ + P +E +R+FV F +A+ +LDGRFFGGR +
Sbjct: 548 EIGEECSNYGIVERVVLHLVEPPPPEPEECLRVFVVFSGMAGAWRAIKELDGRFFGGRNI 607
Query: 356 RATFYDEERFSKNE 369
+AT++DE RF K +
Sbjct: 608 KATYFDETRFDKGD 621
>gi|195135155|ref|XP_002012000.1| GI16722 [Drosophila mojavensis]
gi|193918264|gb|EDW17131.1| GI16722 [Drosophila mojavensis]
Length = 616
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 515 SRVIILRNMVGPDDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 574
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + L GRFFGGR V A YD+ F + +L+
Sbjct: 575 EFSAGVEAVRGKDALHGRFFGGRRVVAELYDQALFDQGDLS 615
>gi|388857806|emb|CCF48700.1| uncharacterized protein [Ustilago hordei]
Length = 666
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 127/274 (46%), Gaps = 52/274 (18%)
Query: 147 ENASASRLNMSGEEAWKRRAAMS------------SGGVP-----------------PRS 177
E A RL MSGEEA++RR A+S S G+P PRS
Sbjct: 386 EEAYQQRLAMSGEEAYQRRVALSQQQHPQASHPQASQGIPTGPEAGPPGPPPGAAPEPRS 445
Query: 178 PSPPPVNVESGGGGG-------------GFTIGKSETSGLGLGAGGQMTAAQRMMAKMGW 224
SP ++V + F + G + A+R M G+
Sbjct: 446 ASPTQLDVAARQTAAAAIAARLVQSQTRSFPSNRIAICTSSAGKDDTRSFAERYMTSQGY 505
Query: 225 KEGQGLGRQ-EQGITTPLMARK--TDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLR 281
GQG+G +GITTPL + + + G I++ + K++++ + F G P+R+++L
Sbjct: 506 IPGQGIGAAGNKGITTPLTVSQNLSSSQKGSIIHP-DQKTQQQEELSKF-GVPSRIIVLL 563
Query: 282 NMV-----GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
NM+ E +EL +++ +EC KYG V R+L F++ + VR+FV+F
Sbjct: 564 NMITLSDLQREEEREELIEDIAAECGKYGIVKRILPFQLGGAEGGQEGQVRMFVEFSGEA 623
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
KA+ LDGR+F GR VRA +Y EE F + +
Sbjct: 624 AGWKAVRGLDGRWFEGRQVRAFYYHEEAFLQQQY 657
>gi|195375406|ref|XP_002046492.1| GJ12466 [Drosophila virilis]
gi|194153650|gb|EDW68834.1| GJ12466 [Drosophila virilis]
Length = 645
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 544 SRVIILRNMVGPDDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 603
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + L GRFFGGR V A YD+ F + +L+
Sbjct: 604 EFSAGVEAVRGKDALHGRFFGGRRVVAELYDQALFDQGDLS 644
>gi|296411000|ref|XP_002835223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627998|emb|CAZ79344.1| unnamed protein product [Tuber melanosporum]
Length = 546
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRA----GVIVNASENKSEKKV 265
GQ A R+M+K+GW+ G GLG GIT PL A T + G I++ +NK
Sbjct: 377 GQKDFAARLMSKLGWRAGTGLGASSTGITQPLRAVHTKSKDHPTRGKIID--KNKPNPAA 434
Query: 266 KSVNFNGPPTRVLLLRNMVGPGEVDDE--LEDEVGSECAK-YGTVTRVLIFEITE----P 318
+ F GP + V++LR+MV E +DE L E+G EC YG V RVL+ +
Sbjct: 435 TAGKF-GPASVVVVLRHMVDGLEGEDEAVLMQEIGDECENSYGGVERVLVVWGKDDGEGD 493
Query: 319 NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
N A R+FV+F +A+ L+GR F G + A F+D+++F E
Sbjct: 494 NAGEKAASRVFVKFSGELAALRAVNALEGRLFNGNTIEARFFDKDKFEDREF 545
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDE----AVRI 328
++V++LRNMVGP +VD+ L+DE+ EC KYG V RV+I++ +E ++ D+ V+I
Sbjct: 569 SKVVILRNMVGPEDVDETLQDEIQDECGKYGIVERVIIYKERQSEGDYAEDDNTDVIVKI 628
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
FV+F ++ + KA L GR+FGGR+V+A YD+ F +L+
Sbjct: 629 FVEFSQALEADKAREALHGRYFGGRLVKAESYDQALFDHGDLS 671
>gi|24655233|ref|NP_728610.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|24655237|ref|NP_728611.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|24655242|ref|NP_728612.1| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|281365434|ref|NP_001163315.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|281365436|ref|NP_001163316.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|281365438|ref|NP_001163317.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|281365440|ref|NP_001163318.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|281365442|ref|NP_001163319.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|281365444|ref|NP_001163320.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
gi|7292089|gb|AAF47502.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|10727221|gb|AAG22221.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|16768670|gb|AAL28554.1| HL02140p [Drosophila melanogaster]
gi|23092776|gb|AAG22222.2| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|27820105|gb|AAO25077.1| GH01086p [Drosophila melanogaster]
gi|220953270|gb|ACL89178.1| pUf68-PB [synthetic construct]
gi|272454997|gb|ACZ94587.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|272454998|gb|ACZ94588.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|272454999|gb|ACZ94589.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|272455000|gb|ACZ94590.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|272455001|gb|ACZ94591.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|272455002|gb|ACZ94592.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
Length = 545
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 444 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 503
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + LDGRFFGGR V A YD+ F + +L+
Sbjct: 504 EFSAGAEAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLS 544
>gi|358334696|dbj|GAA40294.2| poly(U)-binding-splicing factor PUF60, partial [Clonorchis
sinensis]
Length = 519
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 273 PPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 332
P + +L+LRNMVGP + DDELE EV +EC++YG+V RV++ + +P+ V++FVQF
Sbjct: 421 PVSGILVLRNMVGPEDCDDELEGEVTAECSRYGSVQRVIVHQEPDPSTNT-LVVKVFVQF 479
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + A+ L+GRFF GR + A YD F+ N+L+
Sbjct: 480 DSVQSVQNAVQALNGRFFAGRQIVAEHYDLHAFTLNDLS 518
>gi|395512680|ref|XP_003760563.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Sarcophilus
harrisii]
Length = 553
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 455 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 512
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 513 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 552
>gi|395860114|ref|XP_003802360.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Otolemur garnettii]
Length = 542
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 444 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 501
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 502 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 541
>gi|157743332|ref|NP_001099058.1| poly(U)-binding-splicing factor PUF60 [Danio rerio]
gi|157423233|gb|AAI53302.1| LOC562370 protein [Danio rerio]
Length = 518
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFE 333
+ V++LRNMVGP ++DD+LE EV EC K+G V RV+I++ + E V+IFV+F
Sbjct: 420 STVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFS 479
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + KA+ L+ R+FGGR V A YD+ERF ++L+
Sbjct: 480 AASEMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDLS 517
>gi|417402525|gb|JAA48108.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 541
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 443 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 500
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 501 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 540
>gi|417402731|gb|JAA48201.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 558
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 460 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 517
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 518 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 557
>gi|395860112|ref|XP_003802359.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Otolemur garnettii]
Length = 558
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 460 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 517
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 518 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 557
>gi|187607191|ref|NP_001120082.1| poly-U binding splicing factor 60KDa [Xenopus (Silurana)
tropicalis]
gi|165971204|gb|AAI58522.1| LOC100145091 protein [Xenopus (Silurana) tropicalis]
Length = 507
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 409 STVMVLRNMVDPRDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 466
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F S +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 467 FSMSSETQKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 506
>gi|345315810|ref|XP_001511498.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like
[Ornithorhynchus anatinus]
Length = 499
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQFE 333
V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+F
Sbjct: 403 VMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVEFS 460
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 461 MASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 498
>gi|195427509|ref|XP_002061819.1| GK17204 [Drosophila willistoni]
gi|194157904|gb|EDW72805.1| GK17204 [Drosophila willistoni]
Length = 631
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 530 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 589
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + L GRFFGGR V A YD+ F + +L+
Sbjct: 590 EFSAGAEAIRGKDALHGRFFGGRRVIAELYDQSIFDQGDLS 630
>gi|354491098|ref|XP_003507693.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Cricetulus
griseus]
Length = 582
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 484 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 541
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 542 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 581
>gi|449495396|ref|XP_002188522.2| PREDICTED: poly(U)-binding-splicing factor PUF60 [Taeniopygia
guttata]
Length = 514
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 416 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 473
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 474 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 513
>gi|440911935|gb|ELR61552.1| Poly(U)-binding-splicing factor PUF60, partial [Bos grunniens
mutus]
Length = 561
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 463 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 520
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 521 FSVASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 560
>gi|156398787|ref|XP_001638369.1| predicted protein [Nematostella vectensis]
gi|156225489|gb|EDO46306.1| predicted protein [Nematostella vectensis]
Length = 504
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEAVRIFVQFE 333
++V++LRNMVG ++D++LE EV EC+K+GTV+RV+I+ E + V+IFV+F
Sbjct: 406 SKVMVLRNMVGVEDLDEDLEHEVTDECSKFGTVSRVVIYKEKQGEEEDAEVIVKIFVEFT 465
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
++T KA +LDGR+FGGR V+A Y+E++F +L+
Sbjct: 466 SPDETDKATSNLDGRWFGGRAVKAEAYNEDKFLSADLS 503
>gi|326918217|ref|XP_003205387.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Meleagris
gallopavo]
Length = 516
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 418 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 475
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 476 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 515
>gi|195998107|ref|XP_002108922.1| hypothetical protein TRIADDRAFT_19511 [Trichoplax adhaerens]
gi|190589698|gb|EDV29720.1| hypothetical protein TRIADDRAFT_19511, partial [Trichoplax
adhaerens]
Length = 88
Score = 91.3 bits (225), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 282 NMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKA 341
N+VG GEVDD+LE E+ EC YG V RVLI E+ P + AVRIFV+F+R E KA
Sbjct: 1 NIVGKGEVDDDLEPEIAEECNSYGAVERVLIHEL--PEATEELAVRIFVEFKRQESAVKA 58
Query: 342 LIDLDGRFFGGRVVRATFYDEERFSKNEL 370
I L+GR+FGGR V+ F+D +F + +L
Sbjct: 59 AIALNGRYFGGRNVKVKFWDYNKFRRFQL 87
>gi|431908112|gb|ELK11715.1| Poly(U)-binding-splicing factor PUF60 [Pteropus alecto]
Length = 501
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 403 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 460
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 461 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 500
>gi|297300235|ref|XP_001087851.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 5 [Macaca
mulatta]
Length = 542
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 444 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 501
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 502 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 541
>gi|402794118|ref|NP_001258025.1| poly(U)-binding-splicing factor PUF60 isoform d [Homo sapiens]
gi|119602600|gb|EAW82194.1| fuse-binding protein-interacting repressor, isoform CRA_k [Homo
sapiens]
Length = 541
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 443 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 500
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 501 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 540
>gi|1809248|gb|AAB41656.1| siah binding protein 1 [Homo sapiens]
Length = 541
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 443 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 500
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 501 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 540
>gi|73974710|ref|XP_857040.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Canis
lupus familiaris]
Length = 543
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 445 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 502
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 503 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 542
>gi|327290985|ref|XP_003230202.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Anolis
carolinensis]
Length = 541
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 443 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 500
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 501 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 540
>gi|301773444|ref|XP_002922145.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Ailuropoda melanoleuca]
Length = 577
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 479 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 536
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 537 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 576
>gi|297300233|ref|XP_001087975.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Macaca
mulatta]
Length = 559
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 461 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 518
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 519 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 558
>gi|402794155|ref|NP_001258027.1| poly(U)-binding-splicing factor PUF60 isoform f [Homo sapiens]
gi|119602601|gb|EAW82195.1| fuse-binding protein-interacting repressor, isoform CRA_l [Homo
sapiens]
Length = 558
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 460 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 517
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 518 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 557
>gi|359321052|ref|XP_848710.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Canis
lupus familiaris]
Length = 560
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 462 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 519
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 520 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 559
>gi|432911999|ref|XP_004078817.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 523
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFE 333
+ V++LRNMVGP ++DD+LE EV EC KYG V RV+I++ + D V+IFV+F
Sbjct: 425 STVMVLRNMVGPEDIDDDLEGEVTEECGKYGQVKRVIIYQERQGEEDDADIIVKIFVEFC 484
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + +A+ L+ R+FGGR V A YD+ERF ++L+
Sbjct: 485 EAMEMNRAIQALNNRWFGGRKVVAEVYDQERFENSDLS 522
>gi|390475872|ref|XP_002759200.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Callithrix jacchus]
Length = 563
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 465 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 522
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 523 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 562
>gi|380810662|gb|AFE77206.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
gi|383416607|gb|AFH31517.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
Length = 560
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 462 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 519
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 520 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 559
>gi|17978512|ref|NP_510965.1| poly(U)-binding-splicing factor PUF60 isoform a [Homo sapiens]
gi|397497388|ref|XP_003819493.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
paniscus]
gi|402879352|ref|XP_003903307.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Papio
anubis]
gi|441648299|ref|XP_004090873.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|74761960|sp|Q9UHX1.1|PUF60_HUMAN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=FUSE-binding protein-interacting repressor;
Short=FBP-interacting repressor; AltName:
Full=Ro-binding protein 1; Short=RoBP1; AltName:
Full=Siah-binding protein 1; Short=Siah-BP1
gi|6684440|gb|AAF23589.1|AF114818_1 Ro ribonucleoprotein-binding protein 1 [Homo sapiens]
gi|48146403|emb|CAG33424.1| SIAHBP1 [Homo sapiens]
gi|119602593|gb|EAW82187.1| fuse-binding protein-interacting repressor, isoform CRA_d [Homo
sapiens]
gi|158258178|dbj|BAF85062.1| unnamed protein product [Homo sapiens]
gi|410220384|gb|JAA07411.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303418|gb|JAA30309.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 559
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 461 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 518
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 519 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 558
>gi|332831344|ref|XP_003312009.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
troglodytes]
Length = 542
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 444 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 501
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 502 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 541
>gi|6176532|gb|AAF05605.1|AF190744_1 poly-U binding splicing factor PUF60 [Homo sapiens]
Length = 556
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 458 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 515
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 516 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 555
>gi|332831342|ref|XP_528257.3| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
troglodytes]
Length = 559
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 461 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 518
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 519 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 558
>gi|380810660|gb|AFE77205.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
gi|383416605|gb|AFH31516.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
Length = 543
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 445 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 502
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 503 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 542
>gi|17298690|ref|NP_055096.2| poly(U)-binding-splicing factor PUF60 isoform b [Homo sapiens]
gi|397497390|ref|XP_003819494.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
paniscus]
gi|402879354|ref|XP_003903308.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Papio
anubis]
gi|441648302|ref|XP_004090874.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|17152040|gb|AAF27522.2|AF217197_1 FBP-interacting repressor [Homo sapiens]
gi|14250810|gb|AAH08875.1| Poly-U binding splicing factor 60KDa [Homo sapiens]
gi|119602594|gb|EAW82188.1| fuse-binding protein-interacting repressor, isoform CRA_e [Homo
sapiens]
gi|410220382|gb|JAA07410.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303416|gb|JAA30308.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 542
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 444 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 501
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 502 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 541
>gi|444722723|gb|ELW63400.1| Poly(U)-binding-splicing factor PUF60 [Tupaia chinensis]
Length = 577
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 479 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 536
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 537 FSVASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 576
>gi|302422194|ref|XP_003008927.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261352073|gb|EEY14501.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 507
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 87/176 (49%), Gaps = 30/176 (17%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAG--------VIVN 255
GQ AQR+M+K GW +G GLG E GI PL +K+D G +
Sbjct: 336 GQAGFAQRLMSKYGWTKGSGLGADESGIINPLRVQVEKRKKKSDAEGGGWRDPANKAKII 395
Query: 256 ASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVTR 309
+ + + S + GP + V++LRNM+ GE+ L E+G EC KYG V R
Sbjct: 396 GGQRRDDGAASSSGY-GPMSNVIVLRNMLEGMQDLQGEISSGLGQEIGEECGDKYGRVER 454
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
L F++ E ++F++F +A+ +L+GR F G V ATFYD E+F
Sbjct: 455 -LYFDV--------ENRQVFIKFTDQVSGLRAVSELNGRVFNGNTVAATFYDAEQF 501
>gi|197100546|ref|NP_001127017.1| poly(U)-binding-splicing factor PUF60 [Pongo abelii]
gi|75040908|sp|Q5R469.1|PUF60_PONAB RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|55733539|emb|CAH93447.1| hypothetical protein [Pongo abelii]
Length = 558
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 460 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 517
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 518 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 557
>gi|449279837|gb|EMC87291.1| Poly(U)-binding-splicing factor PUF60, partial [Columba livia]
Length = 513
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 415 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 472
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 473 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 512
>gi|426235336|ref|XP_004011640.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60 [Ovis aries]
Length = 506
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 408 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 465
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 466 FSVASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 505
>gi|355698276|gb|EHH28824.1| 60 kDa poly(U)-binding-splicing factor [Macaca mulatta]
Length = 568
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 470 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 527
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 528 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 567
>gi|296480748|tpg|DAA22863.1| TPA: poly(U)-binding-splicing factor PUF60 [Bos taurus]
Length = 530
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 432 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 489
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 490 FSVASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 529
>gi|403302946|ref|XP_003942109.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 492
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 394 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 451
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 452 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 491
>gi|50344898|ref|NP_001002121.1| poly(U)-binding-splicing factor PUF60-B [Danio rerio]
gi|47940403|gb|AAH71467.1| Poly-U binding splicing factor b [Danio rerio]
Length = 502
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMVGP ++DD+LE EV EC KYG V RV+I++ E D+A V+IFV+
Sbjct: 404 STVMVLRNMVGPEDIDDDLEGEVMEECGKYGAVNRVIIYQ--ERQGEEDDAEIIVKIFVE 461
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F + + KA+ L+ R+F GR V A YD++RF+ ++L
Sbjct: 462 FSDAGEMNKAIQALNNRWFAGRKVVAELYDQDRFNSSDL 500
>gi|281341440|gb|EFB17024.1| hypothetical protein PANDA_011097 [Ailuropoda melanoleuca]
Length = 512
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 414 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 471
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 472 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 511
>gi|126323028|ref|XP_001370705.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Monodelphis
domestica]
Length = 637
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 539 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 596
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 597 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 636
>gi|403302944|ref|XP_003942108.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 509
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 411 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 468
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 469 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 508
>gi|160332383|sp|Q6IQE0.2|PU60B_DANRE RecName: Full=Poly(U)-binding-splicing factor PUF60-B
Length = 516
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMVGP ++DD+LE EV EC KYG V RV+I++ E D+A V+IFV+
Sbjct: 418 STVMVLRNMVGPEDIDDDLEGEVMEECGKYGAVNRVIIYQ--ERQGEEDDAEIIVKIFVE 475
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F + + KA+ L+ R+F GR V A YD++RF+ ++L
Sbjct: 476 FSDAGEMNKAIQALNNRWFAGRKVVAELYDQDRFNSSDL 514
>gi|402794180|ref|NP_001258028.1| poly(U)-binding-splicing factor PUF60 isoform g [Homo sapiens]
gi|426360971|ref|XP_004047701.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Gorilla
gorilla gorilla]
gi|441648312|ref|XP_003280819.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Nomascus leucogenys]
Length = 530
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 432 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 489
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 490 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 529
>gi|209862867|ref|NP_001129505.1| poly(U)-binding-splicing factor PUF60 isoform c [Homo sapiens]
gi|109087696|ref|XP_001087604.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 3 [Macaca
mulatta]
gi|441648305|ref|XP_004090875.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|15030041|gb|AAH11265.1| PUF60 protein [Homo sapiens]
gi|15080471|gb|AAH11979.1| PUF60 protein [Homo sapiens]
gi|119602595|gb|EAW82189.1| fuse-binding protein-interacting repressor, isoform CRA_f [Homo
sapiens]
Length = 516
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 418 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 475
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 476 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 515
>gi|410042304|ref|XP_003951412.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 530
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 432 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 489
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 490 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 529
>gi|410042302|ref|XP_003951411.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 513
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 415 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 472
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 473 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 512
>gi|338728499|ref|XP_003365686.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Equus caballus]
Length = 516
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 418 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 475
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 476 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 515
>gi|195167652|ref|XP_002024647.1| GL22585 [Drosophila persimilis]
gi|198467049|ref|XP_001354234.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
gi|194108052|gb|EDW30095.1| GL22585 [Drosophila persimilis]
gi|198149485|gb|EAL31287.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
Length = 653
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 552 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 611
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + L GRFFGGR V A YD+ F + +L+
Sbjct: 612 EFSAGAEAQRGKEALHGRFFGGRRVVAELYDQGVFDQGDLS 652
>gi|207079925|ref|NP_001128734.1| DKFZP468L0227 protein [Pongo abelii]
gi|402794126|ref|NP_001258026.1| poly(U)-binding-splicing factor PUF60 isoform e [Homo sapiens]
gi|426360969|ref|XP_004047700.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Gorilla
gorilla gorilla]
gi|441648309|ref|XP_003280820.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Nomascus leucogenys]
gi|55725023|emb|CAH89379.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 415 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 472
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 473 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 512
>gi|348541381|ref|XP_003458165.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 513
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMVGP ++DD+LE EV EC K+G V RV+I++ E D+A V+IFV+
Sbjct: 415 STVMVLRNMVGPDDIDDDLEGEVTEECGKFGQVKRVIIYQ--ERQGEEDDAEVIVKIFVE 472
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + + +A+ L+ R+FGGR V A YD+ERF +L+
Sbjct: 473 FSEAAEMNRAIQALNHRWFGGRKVVAEVYDQERFDNGDLS 512
>gi|344236629|gb|EGV92732.1| Poly(U)-binding-splicing factor PUF60 [Cricetulus griseus]
Length = 253
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 155 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 212
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 213 FSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 252
>gi|410042300|ref|XP_003951410.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 516
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 418 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 475
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 476 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 515
>gi|194747299|ref|XP_001956090.1| GF25032 [Drosophila ananassae]
gi|190623372|gb|EDV38896.1| GF25032 [Drosophila ananassae]
Length = 643
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+GTV+RV+IF E N DEA V+IFV
Sbjct: 542 SRVIILRNMVGPEDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFV 601
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + L GRFFGGR V A YD+ F + +L+
Sbjct: 602 EFSAGSEAQRGKEALHGRFFGGRRVVAELYDQGIFDQGDLS 642
>gi|427776743|gb|JAA53823.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Rhipicephalus pulchellus]
Length = 579
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEAVRIFVQFERS 335
V++LRNMVG ++DDELE EV EC ++GTV RV+I+ E + + V+IFV+F ++
Sbjct: 483 VVVLRNMVGVEDLDDELESEVTDECGRFGTVKRVIIYQERQSEDENAEIVVKIFVEFSQA 542
Query: 336 EQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
++ A L+GRFFGGR+V++ YD+ + N+L+
Sbjct: 543 QEAASARDALNGRFFGGRLVKSELYDQTLYEANDLS 578
>gi|296827756|ref|XP_002851219.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238838773|gb|EEQ28435.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 477
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAGVIVNASENK--- 260
GQ A+R++ K GW +G GLG E GI PL A RK D G +V +
Sbjct: 304 GQKGFAERLLTKYGWTKGSGLGANESGIVNPLQAKVLKQKRKPDSEGGGLVTPGGARGKI 363
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECA-KYGTVTRVLI 312
++K + GP + V++L MV ++D ELE E+G EC KYG V RV I
Sbjct: 364 IGGDRKQEEHGKFGPMSDVVILHGMVDGLDLDAELESGELMQEIGEECGEKYGRVERVYI 423
Query: 313 FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++ PV F++F +A+ L+GR F G + A F+D ERF
Sbjct: 424 DRNSKDKIPV------FIKFTNQLSALRAVNALEGRIFNGNTITARFFDSERF 470
>gi|406860792|gb|EKD13849.1| G-patch DNA repair protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 521
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 91/182 (50%), Gaps = 32/182 (17%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAG---------VIV 254
GQ A+R+M+K GW +G+GLG +E GI PL +K+D G I+
Sbjct: 344 GQRGFAERLMSKYGWSKGKGLGAEESGIVNPLRVQIEKRKKKSDAEGGGFREPGGRGKII 403
Query: 255 NASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYG 305
+N EK+ + F GP + V++LR MV ++D+E+E E+G ECA KYG
Sbjct: 404 GGKKNVPEKEEEVGKF-GPMSEVIVLRGMVDGMDLDEEVEGSGDGGLMQEIGDECAEKYG 462
Query: 306 TVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V RV I ++FV+F +A+ L+GR F G + A FYD ERF
Sbjct: 463 RVERVYIDRHG-------ATPKVFVKFTSQLSGLRAVNALEGRIFNGNTISALFYDTERF 515
Query: 366 SK 367
K
Sbjct: 516 EK 517
>gi|338728501|ref|XP_001496155.3| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 1
[Equus caballus]
Length = 499
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 401 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 458
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 459 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 498
>gi|402794208|ref|NP_001258029.1| poly(U)-binding-splicing factor PUF60 isoform h [Homo sapiens]
gi|109087698|ref|XP_001087484.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Macaca
mulatta]
gi|332263566|ref|XP_003280822.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 4
[Nomascus leucogenys]
gi|16307289|gb|AAH09734.1| PUF60 protein [Homo sapiens]
gi|119602596|gb|EAW82190.1| fuse-binding protein-interacting repressor, isoform CRA_g [Homo
sapiens]
gi|261859062|dbj|BAI46053.1| poly-U binding splicing factor 60KDa [synthetic construct]
Length = 499
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 401 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 458
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 459 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 498
>gi|410042306|ref|XP_003951413.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 499
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 401 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 458
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 459 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 498
>gi|410987958|ref|XP_004000259.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Felis catus]
Length = 502
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 404 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 461
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 462 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 501
>gi|355780002|gb|EHH64478.1| 60 kDa poly(U)-binding-splicing factor [Macaca fascicularis]
Length = 521
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+ V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+
Sbjct: 423 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVE 480
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 481 FSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 520
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEA---VRIFV 330
+RV++LRNMVGP +VD+ L++E+ EC+K+G V+RV+IF E N DEA V+IFV
Sbjct: 542 SRVIILRNMVGPDDVDETLQEEIQEECSKFGIVSRVIIFNEKQTENEDDDEAEIIVKIFV 601
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + L GRFFGGR V A YD+ F + +L+
Sbjct: 602 EFSAGVEAMRGKDALHGRFFGGRRVVAELYDQSLFDQGDLS 642
>gi|410925539|ref|XP_003976238.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 506
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 12/143 (8%)
Query: 232 RQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDD 291
RQ+ G+ PL ++ ++ S + + V + V++LRNMVGP ++DD
Sbjct: 372 RQQDGVMEPLSEQEH-------LSISGSSARHMVMRKLLRKQESTVMVLRNMVGPDDIDD 424
Query: 292 ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQFERSEQTTKALIDLDGR 348
+LE EV EC K+G V RV+I++ E D+A V+IFV+F + +A+ L+ R
Sbjct: 425 DLEGEVTEECGKFGQVKRVIIYQ--ERQGEEDDAEVIVKIFVEFSEVAEMNRAIQALNHR 482
Query: 349 FFGGRVVRATFYDEERFSKNELA 371
+FGGR V A YD+ERF ++L+
Sbjct: 483 WFGGRKVAAEVYDQERFETSDLS 505
>gi|343425477|emb|CBQ69012.1| conserved hypothetcial protein [Sporisorium reilianum SRZ2]
Length = 637
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNG 272
T A R+MA G G GLG G+ PL T R G I++A++ +
Sbjct: 475 TFATRLMASYGHVPGHGLGASLHGMVEPLTVTATRGR-GHIIDAAQYAHTHSDAQRYGSA 533
Query: 273 PPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQF 332
+RV++L NM +L D+V ECAK+G V RV + + VR+FVQF
Sbjct: 534 AASRVIVLLNMPPDAHAQHDLIDDVAQECAKFGIVQRVFVHRCEG-----EGEVRVFVQF 588
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+ KA+ +L GR+F GR ++A +YD F ++
Sbjct: 589 TGEAGSWKAVRNLHGRWFEGRQLQALYYDAAAFERS 624
>gi|134106515|ref|XP_778268.1| hypothetical protein CNBA2680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260971|gb|EAL23621.1| hypothetical protein CNBA2680 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 624
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 94/196 (47%), Gaps = 38/196 (19%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRA------------------- 250
G T A++MM K G EG GLG + +GI L A
Sbjct: 425 GGGTFAEKMMRKWGHVEGTGLGARGEGIVHALTTEHVAPVANLSQPLSKRALAKQKAAAA 484
Query: 251 --------------GVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGP-GEVDDELED 295
G IVN +NK E+ + G RV+ LR +VG E+D+EL +
Sbjct: 485 NAKSRKWVQAPSARGRIVN--DNKDERAKEEKERKGEEGRVICLRGLVGSVEEIDEELVN 542
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
E+G EC+ YG V RV++ + P +E +R+FV F +A+ +LDGRFFGGR +
Sbjct: 543 EIGEECSNYGIVERVVLHLVEPPPPEPEECLRVFVVFSGMAGAWRAIKELDGRFFGGRNI 602
Query: 356 --RATFYDEERFSKNE 369
+AT++DE RF K +
Sbjct: 603 NQKATYFDETRFDKGD 618
>gi|154300980|ref|XP_001550904.1| hypothetical protein BC1G_10628 [Botryotinia fuckeliana B05.10]
gi|347831152|emb|CCD46849.1| similar to related to DNA-damage repair protein DRT111 precursor
[Botryotinia fuckeliana]
Length = 496
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 85/180 (47%), Gaps = 30/180 (16%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAGVIVNASENKSEK 263
GQ A+R+M+K GW +G GLG G+ TPL +K+D G +A
Sbjct: 321 GQKGFAERLMSKYGWSKGSGLGADGSGMITPLQVKLDKRKKKSDAEGGGFRDAGGRGKII 380
Query: 264 KVKSV-------NFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTV 307
K V F GP + V++LR MV ++D+E+E E+G EC KYG V
Sbjct: 381 GGKKVVKEDEAGRF-GPMSEVIVLRGMVDNMDLDEEVEGSGDGGLMQEIGDECGEKYGRV 439
Query: 308 TRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
RV I + P ++FV+F +A+ L+GR F G + A FYD E F K
Sbjct: 440 ERVYIDRQSAP-------AKVFVKFTNQLSALRAVNALEGRIFNGNTISALFYDTETFEK 492
>gi|432098308|gb|ELK28110.1| Splicing factor 45 [Myotis davidii]
Length = 127
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 237 ITTPLMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDD 291
++T L KT +R G I+ +E + +K S PT+V+LLRNMVG GEVD+
Sbjct: 4 LSTALSVEKTSKRGGKIIVGEVTEKDATRKSGSNPLTEILKRPTKVVLLRNMVGAGEVDE 63
Query: 292 ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFG 351
+LE E EC K G V + +IFEI P P D+AVRIF++FER E KA+IDL+G G
Sbjct: 64 DLEVETKEECEKCGKVGKCVIFEI--PGAP-DDAVRIFLEFERVESAIKAVIDLNGT--G 118
Query: 352 GRVVRATF 359
G+ + F
Sbjct: 119 GKSMFLHF 126
>gi|355714557|gb|AES05043.1| poly-U binding splicing factor 60KDa [Mustela putorius furo]
Length = 230
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQFE 333
V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+F
Sbjct: 135 VMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVEFS 192
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ +T KA+ L+GR+F GR V A YD+ERF +L+
Sbjct: 193 VASETHKAIQALNGRWFAGRKVVAEVYDQERFDNRDLS 230
>gi|159164265|pdb|2DNY|A Chain A, Solution Structure Of The Third Rna Binding Domain Of Fbp-
Interacting Repressor, Siahbp1
Length = 119
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 5/99 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQFE 333
V++LRNMV P ++DD+LE EV EC K+G V RV+I++ E ++A V+IFV+F
Sbjct: 17 VMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVEFS 74
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
+ +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 75 IASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 113
>gi|241315296|ref|XP_002408027.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215497243|gb|EEC06737.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 509
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF---EITEPNFPVDEAVRIFVQFE 333
V++LRNMVG ++DDELE EV EC ++G V RV+I+ + E N + V+IFV+F
Sbjct: 413 VVVLRNMVGVEDLDDELESEVTDECGRFGMVKRVIIYQERQSEEENAEI--IVKIFVEFS 470
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+++++ A L+GRFFGGR+V+A YD+ + N+L+
Sbjct: 471 KAQESAGARDALNGRFFGGRLVKAELYDQTLYEANDLS 508
>gi|210060966|pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060967|pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060968|pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060969|pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060970|pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060971|pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060972|pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060973|pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 8/142 (5%)
Query: 235 QGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPP--TRVLLLRNMVGPGEVDDE 292
+GI T L+ K A V A K+ N G + V++LRNMV P ++DD+
Sbjct: 83 RGIPT-LLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMVLRNMVDPKDIDDD 141
Query: 293 LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQFERSEQTTKALIDLDGRF 349
LE EV EC K+G V RV+I++ E ++A V+IFV+F + +T KA+ L+GR+
Sbjct: 142 LEGEVTEECGKFGAVNRVIIYQ--EKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRW 199
Query: 350 FGGRVVRATFYDEERFSKNELA 371
F GR V A YD+ERF ++L+
Sbjct: 200 FAGRKVVAEVYDQERFDNSDLS 221
>gi|390345173|ref|XP_003726279.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 1
[Strongylocentrotus purpuratus]
Length = 601
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFE 333
+ V++LRNMVG ++DDELE EV EC K+GTV RV+I++ + E V+IFV+F
Sbjct: 503 SHVMVLRNMVGVEDLDDELEGEVTEECGKFGTVNRVVIYQERQGEEEDAEVIVKIFVEFS 562
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ +A L+ R+FGGR+VR YD+ERF ++L+
Sbjct: 563 DPAEAEQAADSLNSRWFGGRMVRGEIYDQERFDSSDLS 600
>gi|328696967|ref|XP_001951881.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 603
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF---EITEPNFPVDEAVRIFVQ 331
+RV++LRNMVG +VDD L++E+ EC+K+G V RV+I+ + + D V+IFV+
Sbjct: 503 SRVVILRNMVGVEDVDDSLQEEIQDECSKFGVVERVIIYKEKQSDSVDDDSDTIVKIFVE 562
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F + + +A L+GRFFGGR+V+A YD+ F ++ +
Sbjct: 563 FTQMSEAEQARDSLNGRFFGGRLVKAELYDQALFDHSDFS 602
>gi|390345175|ref|XP_785572.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Strongylocentrotus purpuratus]
Length = 574
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFE 333
+ V++LRNMVG ++DDELE EV EC K+GTV RV+I++ + E V+IFV+F
Sbjct: 476 SHVMVLRNMVGVEDLDDELEGEVTEECGKFGTVNRVVIYQERQGEEEDAEVIVKIFVEFS 535
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ +A L+ R+FGGR+VR YD+ERF ++L+
Sbjct: 536 DPAEAEQAADSLNSRWFGGRMVRGEIYDQERFDSSDLS 573
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+RV++LRNMV P +VD+ L++E+ EC+K+G V RV+I++ +E + + V+IFV+F
Sbjct: 411 SRVVILRNMVAPEDVDETLQEEIQDECSKFGVVERVIIYKERQSEDDENAEVIVKIFVEF 470
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + +A L+GR+FGGR+V+ YD+ F N+ +
Sbjct: 471 SQMSEAERARDSLNGRYFGGRLVKGELYDQALFDNNDFS 509
>gi|46137145|ref|XP_390264.1| hypothetical protein FG10088.1 [Gibberella zeae PH-1]
Length = 496
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 139/344 (40%), Gaps = 85/344 (24%)
Query: 100 YDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENA---------- 149
YDP RP + E+Y R +K + + L R R++ E + + +E ENA
Sbjct: 146 YDPTRPTNVEEYLRSDEKVQEVRDWKALLYRHRRKRVESDLSDEDEGENARPIPSNQFAP 205
Query: 150 -------------------SASRLNMSGEEAWKRRAAMS----------SGGVPPRSPSP 180
+ + +G++A+ RR A+S P + S
Sbjct: 206 PSSYSFVPPPPQSPPASAPAPPPDDATGDDAFARRQALSRNQPAPPPSPPQTSNPATISR 265
Query: 181 PPVNVESGGGGGGFTIGKSETSGL----GLGAG-----------------GQMTAAQRMM 219
PV T G E G LGAG GQ AQR+M
Sbjct: 266 APVRYTQTQDEKSTTGGSVEDDGYSPPPALGAGSTSQPDDDDSNPRSSRPGQSGFAQRLM 325
Query: 220 AKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK---SEKKVKSVN 269
+K GW +G GLG E GI PL + RR G S+ K ++K++S
Sbjct: 326 SKYGWTKGSGLGADESGIINPLHVQVEKRRKKADADGGGWAEPGSKGKIIGGKRKIESTG 385
Query: 270 FNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVD 323
G + V++L+NM+ E+ L E+G EC KYG V R+ I +
Sbjct: 386 RFGTMSDVIVLKNMLENMANLQEEIAGGLGQEIGEECGEKYGRVERLYIDQ--------- 436
Query: 324 EAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
E+ ++F++F +A+ +LDGR F G + FYD E+F +
Sbjct: 437 ESRKVFIKFTNQVSALRAVNELDGRVFNGNTILPEFYDTEKFEQ 480
>gi|260828249|ref|XP_002609076.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
gi|229294430|gb|EEN65086.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
Length = 495
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEI---TEPNFPVDEAVRIFVQ 331
+ V++LRNMVG ++DDELE EV EC KYG V RV+I++ E N D V+IFV+
Sbjct: 397 SNVMILRNMVGIEDLDDELEGEVTDECGKYGQVNRVIIYQERQGEEEN--ADVIVKIFVE 454
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F S + + + L+GR+FGGR V A YD+ +F +L+
Sbjct: 455 FSESFEAERGVQALNGRWFGGRKVSAESYDQLKFDSQDLS 494
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+RV++LRNMV P +VD+ L++E+ EC+K+G V RV+I+ +E + + V+IFV+F
Sbjct: 493 SRVVILRNMVAPEDVDESLQEEIQDECSKFGVVERVIIYNERQSEDDEDAEVIVKIFVEF 552
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + +A L+GR+FGGR+V+ YD+ F ++ +
Sbjct: 553 SQMSEAERARDSLNGRYFGGRLVKGELYDQALFDNSDFS 591
>gi|320165216|gb|EFW42115.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 570
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ ++ L NM+ E+D LE EVG EC+ +GTV RV++ +T N V IFVQF +
Sbjct: 479 SHIVALLNMIDADEIDSMLEQEVGGECSNFGTVERVVV-HVTSKN-----DVAIFVQFAQ 532
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
E+ A++ L+ R+FGGR VRA YDE +F +L+P
Sbjct: 533 LEEADAAVLALNNRWFGGRQVRAQLYDEGQFQSRQLSP 570
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+RV++LRNMV P +VD+ L++E+ EC+K+G V RV+I+ +E + + V+IFV+F
Sbjct: 493 SRVVILRNMVAPEDVDESLQEEIQDECSKFGVVERVIIYNERQSEDDEDAEVIVKIFVEF 552
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + +A L+GR+FGGR+V+ YD+ F ++ +
Sbjct: 553 SQMSEAERARDSLNGRYFGGRLVKGELYDQALFDNSDFS 591
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+RV++LRNMV P +VD+ L++E+ EC+K+G V RV+I+ +E + + V+IFV+F
Sbjct: 493 SRVVILRNMVAPEDVDESLQEEIQDECSKFGVVERVIIYNERQSEDDEDAEVIVKIFVEF 552
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + +A L+GR+FGGR+V+ YD+ F ++ +
Sbjct: 553 SQMSEAERARDSLNGRYFGGRLVKGELYDQALFDNSDFS 591
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+RV++LRNMV P +VD+ L++E+ EC+K+G V RV+I+ +E + + V+IFV+F
Sbjct: 493 SRVVILRNMVAPEDVDESLQEEIQDECSKFGVVERVIIYNERQSEDDEDAEVIVKIFVEF 552
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + +A L+GR+FGGR+V+ YD+ F ++ +
Sbjct: 553 SQMSEAERARDSLNGRYFGGRLVKGELYDQALFDNSDFS 591
>gi|320165239|gb|EFW42138.1| hypothetical protein CAOG_07523 [Capsaspora owczarzaki ATCC 30864]
Length = 598
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ ++ L NM+ E+D LE EVG EC+ +GTV RV++ +T N V IFVQF +
Sbjct: 507 SHIVALLNMIDADEIDSMLEQEVGGECSNFGTVERVVV-HVTSKN-----DVAIFVQFAQ 560
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
E+ A++ L+ R+FGGR VRA YDE +F +L+P
Sbjct: 561 LEEADAAVLALNNRWFGGRQVRAQLYDEGQFQSRQLSP 598
>gi|328771203|gb|EGF81243.1| hypothetical protein BATDEDRAFT_87866 [Batrachochytrium
dendrobatidis JAM81]
Length = 574
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
P+ VLLL NM+ GE+D+ L+DE+ EC KYG V RV++++ + D+ V ++V+F
Sbjct: 482 PSTVLLLCNMITFGEIDEFLQDEIKQECEKYGLVNRVVLWQDKNRTYTSDDLVMVYVEFG 541
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATF 359
+ KA + LDGRFFGGR ++AT+
Sbjct: 542 SVDVAIKARLALDGRFFGGRKIQATY 567
>gi|196009954|ref|XP_002114842.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
gi|190582904|gb|EDV22976.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
Length = 620
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 67/100 (67%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEI---TEPNFPVDEAVRIFVQ 331
++V++L+NMV ++D++LE EV EC+KYGTV RV+I++ E N D V+IFV+
Sbjct: 522 SQVIILKNMVSVEDIDEDLETEVTEECSKYGTVKRVIIYQERQGEEDN--ADVLVKIFVE 579
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F+ Q A+ L+GR+FGGR ++A YD ++S +L+
Sbjct: 580 FDSPSQAGNAIDALNGRWFGGRTIKAETYDVTKYSTGDLS 619
>gi|321479211|gb|EFX90167.1| hypothetical protein DAPPUDRAFT_300177 [Daphnia pulex]
Length = 612
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VRIFVQ 331
+RV++LRNMVGP +VD+ L++E+ EC+K+G V RV+I++ E D+A V+IFV+
Sbjct: 514 SRVIILRNMVGPEDVDETLQEEITDECSKFGNVERVIIYK--EKQSDDDDAEIIVKIFVE 571
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F A L+GRFF GR+VR YD+ + N+L+
Sbjct: 572 FTVGTGAETARDSLNGRFFAGRMVRCDIYDQALYECNDLS 611
>gi|378729166|gb|EHY55625.1| hypothetical protein HMPREF1120_03755 [Exophiala dermatitidis
NIH/UT8656]
Length = 526
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 90/185 (48%), Gaps = 30/185 (16%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR----------------AGVI 253
GQ A+R+M+K GW +GQGLG Q GI PL A K D+R G I
Sbjct: 347 GQKGFAERLMSKYGWSKGQGLGAQGTGIVNPLYA-KVDKRKKKSDAEGGGYATPAGTGKI 405
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE-------DEVGSECA-KYG 305
+ + KS + + F G + V+ L M+ ++D+EL+ E+G EC KYG
Sbjct: 406 LGGHKPKSAQADEEGKF-GAMSEVVRLEGMLNGLDLDEELDQEEGGIMQEIGEECGEKYG 464
Query: 306 TVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+V RV I P EA+ +FV F +A+ L+GR F G ++A F+ +ERF
Sbjct: 465 SVQRVYIH---RPESEEGEAL-VFVHFVSQLSALRAVNALEGRIFNGNAIKARFWPKERF 520
Query: 366 SKNEL 370
E
Sbjct: 521 DLGEY 525
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+RV++LRNMV P +VD+ L++E+ EC+K+G V RV+I++ +E + + V+IFV+F
Sbjct: 446 SRVVILRNMVAPEDVDETLQEEIQDECSKFGVVVRVIIYKERQSEDDENAEVIVKIFVEF 505
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ +A L+GR+FGGR+V+ YD+ F ++ +
Sbjct: 506 AEMNEAERARDSLNGRYFGGRLVKGELYDQALFDNSDFS 544
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+RV++LRNMV P +VD+ L++E+ EC+K+G V RV+I+ +E + + V+IFV+F
Sbjct: 462 SRVVILRNMVAPEDVDESLQEEIQDECSKFGVVERVIIYNERQSEDDENAEVIVKIFVEF 521
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + +A L+GR+FGGR+V+ YD+ F ++ +
Sbjct: 522 SQMSEAERARDSLNGRYFGGRLVKGELYDQALFDNSDFS 560
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+RV++LRNMV P +VD+ L++E+ EC+K+G V RV+I++ +E + + V+IFV+F
Sbjct: 510 SRVVILRNMVAPEDVDETLQEEIQDECSKFGVVVRVIIYKERQSEDDENAEVIVKIFVEF 569
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ +A L+GR+FGGR+V+ YD+ F ++ +
Sbjct: 570 AEMNEAERARDSLNGRYFGGRLVKGELYDQALFDNSDFS 608
>gi|328704296|ref|XP_001948399.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 572
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 68/101 (67%), Gaps = 5/101 (4%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE----AVRIFV 330
++V++L+NM+G +VDD L++E+ EC K+G V R++I++ + + VDE V+IFV
Sbjct: 472 SKVVILKNMLGVEDVDDNLQEEIQDECCKFGVVKRIIIYKEKQSDC-VDEDSDTIVKIFV 530
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F + + +A ++GRFFGGR+V+A YD+ F ++ +
Sbjct: 531 EFTQMSEAEQARDSINGRFFGGRLVKAELYDQALFDHSDFS 571
>gi|340515282|gb|EGR45537.1| predicted protein [Trichoderma reesei QM6a]
Length = 474
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 31/179 (17%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR---------------AGVIV 254
GQ A R+M K GW +G LG E GI PL + RR I+
Sbjct: 298 GQAGFAHRLMTKYGWTKGTALGANESGILNPLRVQVEKRRKRADADGGGWAEPANKAKII 357
Query: 255 NASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVT 308
+ + KK + F GP + V++LR+M+ E++D L E+G EC KYG V
Sbjct: 358 GGNSSSRHKKNDASKF-GPMSEVIVLRHMLDNMPDLEAEIEDGLGQEIGGECGEKYGRVE 416
Query: 309 RVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
R+ I E ++F++F +A+ +LDGR F G + FYD ERF +
Sbjct: 417 RLYIDV---------ETRQVFIKFTDQVSALRAVNELDGRVFNGNNIIPKFYDTERFER 466
>gi|328850882|gb|EGG00042.1| hypothetical protein MELLADRAFT_93872 [Melampsora larici-populina
98AG31]
Length = 792
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 91/217 (41%), Gaps = 65/217 (29%)
Query: 205 GLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITT-------PLMARKTDRRA------- 250
G A GQ A+R+M K GWKEGQGLG E G T+ P + K ++
Sbjct: 569 GNKAPGQPDFARRLMDKYGWKEGQGLGASESGRTSILTVAAAPAHSGKKNKHTSEIGPGP 628
Query: 251 --------GVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVG---- 298
GV+++ E K+++ + G PTRV+ L N+V EVDDEL E+G
Sbjct: 629 VPTIGKGRGVVID--EAKAQRDREEKERYGEPTRVVYLTNVVAVDEVDDELSHEIGLLEF 686
Query: 299 -------------------------------------SECAKYGTVTRVLIFEITEPNFP 321
E K+G V R + + +P
Sbjct: 687 LKPCEPLTRPDLVSFPTLSFLILTLLLTLYVFRKSIAEEAGKHGIVERCFVRIVQKPLDD 746
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
EAVR+F+ F KA+ DGRFFGGR +RA+
Sbjct: 747 PSEAVRVFIIFSGLVGAWKAVKTFDGRFFGGRTIRAS 783
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 97 IEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRL 154
+E+YDPARPNDY ++ K RR +RR ERE + R+ERE + S +
Sbjct: 321 LEDYDPARPNDYTEWMNFTK--------RRREQRREALRLEREHQRRKEREELTESSV 370
>gi|47212475|emb|CAF90271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFERS 335
V++LRNMVGPG++DD LE EV EC K+G V RV++++ + E V+IFV+F
Sbjct: 483 VMVLRNMVGPGDIDDALEGEVTEECGKFGRVKRVIVYQERQGEEDGAEVIVKIFVEFGEV 542
Query: 336 EQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ +A+ L+ R+FGGR V A Y +ERF ++L+
Sbjct: 543 AEMDRAIRALNQRWFGGRQVVAEVYAQERFDSSDLS 578
>gi|345484300|ref|XP_003424998.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
half pint-like [Nasonia vitripennis]
Length = 605
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+RV++LRNMV P +VD L++E+ EC+K+G V RV+I+ +E + + V+IFV+F
Sbjct: 506 SRVVILRNMVAPEDVDQTLQEEIQDECSKFGVVERVIIYNERQSEDDEDPEIIVKIFVEF 565
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + +A L+GR+FGGR+V+ YD+ + N+ +
Sbjct: 566 SQMTEAERARDSLNGRYFGGRLVKGELYDQALYDNNDYS 604
>gi|156043135|ref|XP_001588124.1| hypothetical protein SS1G_10570 [Sclerotinia sclerotiorum 1980]
gi|154694958|gb|EDN94696.1| hypothetical protein SS1G_10570 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 449
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 28/177 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAGVIVNASENKSEK 263
GQ A+R+M+K GW +G GLG G+ TPL +K+D G ++
Sbjct: 274 GQKGFAERLMSKYGWSKGSGLGADGSGMITPLQVKLDKRKKKSDAEGGGFRDSGGRGKII 333
Query: 264 ------KVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVT 308
K + GP + V++LR MV ++D+E+E E+G EC KYG V
Sbjct: 334 GGKKIVKEEETGRFGPMSEVIVLRGMVDNMDLDEEVEGSGDGGIMQEIGDECGEKYGRVE 393
Query: 309 RVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
RV I + P ++FV+F +A+ L+GR F G + A FY+ E F
Sbjct: 394 RVYIDRQSAP-------AKVFVKFTNQLSALRAVNALEGRIFNGNTISALFYNTETF 443
>gi|310796872|gb|EFQ32333.1| G-patch domain-containing protein [Glomerella graminicola M1.001]
Length = 512
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 35/180 (19%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR----------------RAGVI 253
GQ AQR+M+K GW +G GLG E GI PL + R RA ++
Sbjct: 342 GQAGFAQRLMSKYGWTKGSGLGVDESGIVNPLRVQVEKRKKRSDAEGGGWAEPANRAKIL 401
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTV 307
+N E F GP + V++L+ M+ GE+ + L E+G EC KYG V
Sbjct: 402 GGRRKNDGE----GGKFGGPMSEVIVLQQMLDNMEDLQGEIANGLGQEIGEECGEKYGRV 457
Query: 308 TRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
R+ I E ++F++F +A+ +LDGR F G V FYD E+F +
Sbjct: 458 ERLYIDV---------ENRQVFIRFTDQVSALRAVNELDGRVFNGNTVVPKFYDTEKFER 508
>gi|198424504|ref|XP_002131946.1| PREDICTED: similar to poly-U binding splicing factor 60KDa [Ciona
intestinalis]
Length = 491
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 66/99 (66%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEP---NFPVDEAVRIFVQ 331
++V++L NMV E+DD+LE EV EC K+G+V+RV+I++ + + PV V+I+V+
Sbjct: 393 SKVMVLHNMVDVEEIDDDLESEVTEECGKFGSVSRVVIYQEKQSEAEDAPV--TVKIYVE 450
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F S KA+ L+GR+FGGR + A Y + +F+ N+L
Sbjct: 451 FTDSVFCKKAVESLNGRWFGGRKIEAIIYPQHKFNHNDL 489
>gi|341895702|gb|EGT51637.1| CBN-RNP-6 protein [Caenorhabditis brenneri]
Length = 757
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ V++LRNMV P ++D+ LE E+ EC K+GTV V+I NF V+IFV++
Sbjct: 665 SSVIVLRNMVTPDDIDEYLEGEIREECGKFGTVLDVVI-----ANFASSGVVKIFVKYAD 719
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
S Q +A LDGRFFGG +V+A YD+ F
Sbjct: 720 SMQVDRAKAALDGRFFGGNIVKAEAYDQILF 750
>gi|357631053|gb|EHJ78771.1| hypothetical protein KGM_03904 [Danaus plexippus]
Length = 591
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDEAVRIFVQF 332
+R +LL NMV EVDD L E+ EC K+G V R++I+ +E + P V+IFVQF
Sbjct: 492 SRTVLLENMVAAHEVDDALHHEIQEECCKWGRVERLVIYNERQSEDDDPAHADVKIFVQF 551
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
E+ A L GR+FGGR VRA YD++ F +L+
Sbjct: 552 ADPEEAGAAAGALSGRYFGGRTVRARLYDQDLFDHGDLS 590
>gi|403418342|emb|CCM05042.1| predicted protein [Fibroporia radiculosa]
Length = 669
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 99/197 (50%), Gaps = 43/197 (21%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPL----------------MARKTDRRAGVIVNASE 258
A R+MAK G KEGQGLG GI L + K+ + G IVN +E
Sbjct: 471 AARLMAKWGHKEGQGLGADGGGIVHALTVEQVAGGKSKGKGKELGPKSVAQMGKIVNLNE 530
Query: 259 NKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDD-ELEDEVG------------------- 298
+ ++ + F G P+RV++L NMVG +V+D EL DE+G
Sbjct: 531 DAKTREDRE-RF-GEPSRVVVLTNMVGLEDVEDVELRDEIGESSPAPGSGVVVFQLLTSV 588
Query: 299 -----SECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGR 353
EC+K GTV RV++ + P D+AVRIFV F K + +LDGR+FGGR
Sbjct: 589 YGVSGDECSKNGTVERVIVHPVYPPPENPDDAVRIFVLFAGPVGAWKTVRELDGRYFGGR 648
Query: 354 VVRATFYDEERFSKNEL 370
V+A ++ E +F++ +
Sbjct: 649 SVKARYFPETQFNRFDF 665
>gi|408400244|gb|EKJ79328.1| hypothetical protein FPSE_00468 [Fusarium pseudograminearum CS3096]
Length = 481
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ AQR+M+K GW +G GLG E GI PL + RR G S+ K
Sbjct: 312 GQSGFAQRLMSKYGWTKGSGLGADESGIINPLHVQVEKRRKKADADGGGWAEPGSKGKII 371
Query: 261 -SEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVTRVLIF 313
++K++S G + V++L+NM+ E+ L E+G EC KYG V R+ I
Sbjct: 372 GGKRKIESTGRFGTMSDVIVLKNMLENMANLQEEIAGGLGQEIGEECGEKYGRVERLYID 431
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
+ ++ ++F++F +A+ +LDGR F G + FYD E+F +
Sbjct: 432 Q---------DSRKVFIKFTNQVSALRAVNELDGRVFNGNTILPEFYDTEKFEQ 476
>gi|242052837|ref|XP_002455564.1| hypothetical protein SORBIDRAFT_03g013180 [Sorghum bicolor]
gi|241927539|gb|EES00684.1| hypothetical protein SORBIDRAFT_03g013180 [Sorghum bicolor]
Length = 87
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 7/89 (7%)
Query: 32 MAPPTLRKPSSIFAPPQTILKPQS--KPKTTQNSLPTRPHSSPAIAPSPDDAAALPQPAL 89
MAPPTLRKPS+ FAPP +IL+ Q PK T S P + P +A P A + QPA
Sbjct: 1 MAPPTLRKPSTTFAPPPSILRNQHLRPPKATSTSAP----APPVVAAEPAPATSF-QPAF 55
Query: 90 VGVTSTVIEEYDPARPNDYEDYRREKKKK 118
V V STV+EEYDPARPN+YE YR++K ++
Sbjct: 56 VAVQSTVLEEYDPARPNNYEGYRKDKLRR 84
>gi|313244347|emb|CBY15155.1| unnamed protein product [Oikopleura dioica]
Length = 91
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 283 MVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKAL 342
MV P E+D EL E+ ECAKYGTV V I E+ PN P + +VRIF++F R E+ KA+
Sbjct: 1 MVDPEEIDGELSGEISGECAKYGTVANVKIAEV--PNMPKEASVRIFIEFSRMEEAMKAV 58
Query: 343 IDLDGRFFGGRVVRATFYDEERFS 366
I L R FGGR + FYD +++S
Sbjct: 59 IGLHNRIFGGRRLIGGFYDFDQYS 82
>gi|380480362|emb|CCF42477.1| G-patch domain-containing protein [Colletotrichum higginsianum]
Length = 302
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAGVIVNASE----- 258
GQ AQR+M+K GW +G GLG E GI PL +++D G +
Sbjct: 132 GQAGFAQRLMSKYGWTKGSGLGADESGIVNPLRVQVEKRKKRSDAEGGGWAEPANRAKVL 191
Query: 259 -NKSEKKVKSVNFNGPPTRVLLLRNMVGP-----GEVDDELEDEVGSECA-KYGTVTRVL 311
K + + F GP + V++L+ M+ GE+ + L E+G EC KYG V R+
Sbjct: 192 GGKRKDDAEGGKFGGPMSEVIVLQQMLDNMEDLRGEIANGLGQEIGEECGEKYGRVERLY 251
Query: 312 IFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
I E ++F++F +A+ +LDGR F G V FYD E+F +
Sbjct: 252 IDV---------ENRQVFIRFTDQVSALRAVNELDGRVFNGNTVVPKFYDTEKFER 298
>gi|401406015|ref|XP_003882457.1| GA11385, related [Neospora caninum Liverpool]
gi|325116872|emb|CBZ52425.1| GA11385, related [Neospora caninum Liverpool]
Length = 564
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+RV+LL NMV P EVD EL+DEV EC+K+G + RV + + + VRIFV+F
Sbjct: 474 SRVVLLTNMVTPSEVDGELKDEVRDECSKFGGIKRVEVHTL-------KDTVRIFVEFSD 526
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+A+ L GR+FGGR + A YDEE F + E
Sbjct: 527 LSGAREAIPSLHGRWFGGRQIIANTYDEELFHQGE 561
>gi|302914886|ref|XP_003051254.1| hypothetical protein NECHADRAFT_41503 [Nectria haematococca mpVI
77-13-4]
gi|256732192|gb|EEU45541.1| hypothetical protein NECHADRAFT_41503 [Nectria haematococca mpVI
77-13-4]
Length = 477
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 136/344 (39%), Gaps = 92/344 (26%)
Query: 100 YDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREER-ENASASRL---- 154
YDP RP + E+Y +K E + L R R++ +E + + EE + ++++
Sbjct: 146 YDPTRPTNVEEYLHSDEKVMEVREWKALLYRHRRKRDESDLSDDEEDARHVTSTQFAPPA 205
Query: 155 ------------------NMSGEEAWKRRAAMSSG-----------------GVPPRSP- 178
+ +G++A+ RR+AMS G R+P
Sbjct: 206 SYAAVPPPPRSPPAPPPDDATGDDAFARRSAMSQGQASQPPPPPSPPPASNSATISRAPV 265
Query: 179 -----------------SPPPVNVESGGGGGGFTIGKSETSGLGLGAG-GQMTAAQRMMA 220
SPPP GGG + E L + GQ A R+M+
Sbjct: 266 RYTQSEAPKDEGEDDAYSPPPAL------GGGSAVDDLERDSLPRSSRPGQAGFAHRLMS 319
Query: 221 KMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA----------SENKSEKKVKSVNF 270
K GW +G GLG E GI PL + RR + ++KV+
Sbjct: 320 KYGWTKGTGLGADESGIVNPLRVQVEKRRKKADADGGGWAEPGGKGKIIGGKRKVEDTGK 379
Query: 271 NGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDE 324
G + V++L NM+ E+ + L E+G EC KYG V R+ I D+
Sbjct: 380 FGLMSDVIVLHNMLENMANLEEEIAEGLGQEIGEECGEKYGRVERLYI----------DQ 429
Query: 325 AVR-IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
R +F++F +A+ +LDGR F G + F+ E+F K
Sbjct: 430 GSRKVFIKFTNQVSALRAVNELDGRVFNGNAIVPKFFSTEKFEK 473
>gi|345563187|gb|EGX46190.1| hypothetical protein AOL_s00110g14 [Arthrobotrys oligospora ATCC
24927]
Length = 537
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVN 269
GQ A+R+M+K GW +G GLG G+ L + + V +K++K+ V
Sbjct: 377 GQKGFAERLMSKYGWTKGTGLGANSSGMVHALQVKANKGKDSKGVGKILDKNKKRGDDVG 436
Query: 270 FNGPPTRVLLLRNMVGPGEVDD--ELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAV 326
G + V++L MV E +D L E+G EC+ KYG + RV I + P
Sbjct: 437 KFGKMSEVVVLHKMVDGLEGEDPAVLMQEIGDECSEKYGRIERVHIIHKQSEDAP----S 492
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++FVQF +A+ L+GR F G + A F+D + F
Sbjct: 493 KVFVQFTSQLSALRAVNALEGRMFNGNTIEARFFDVDEF 531
>gi|317038478|ref|XP_001401501.2| G-patch DNA repair protein [Aspergillus niger CBS 513.88]
Length = 531
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR----------------RAGVI 253
GQ A+R+MAK GW +G GLG GI PL + + R +I
Sbjct: 355 GQKGFAERLMAKYGWTKGSGLGATGSGIVKPLQVKVEKQKKRPDSEGGGFATPAGRGKII 414
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE---------DEVGSECA-K 303
A +N+ E K GP + V++L+ M+ ++D EL E+G EC+ K
Sbjct: 415 GGARKNEEEGKF------GPMSEVIILKGMLDGMDLDAELAGDGEGGGLMQEIGEECSEK 468
Query: 304 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
YG V RV I + P PV FV+F +A+ L+GR F G + A FYD
Sbjct: 469 YGRVERVFIPRDSAPPVPV------FVKFTNQLSALRAVNALEGRIFSGNAITARFYDVH 522
Query: 364 RFSK 367
F +
Sbjct: 523 TFEQ 526
>gi|341882558|gb|EGT38493.1| hypothetical protein CAEBREN_09163 [Caenorhabditis brenneri]
Length = 757
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ V++LRNMV P ++D+ LE E+ EC K+GTV V+I NF V+IFV++
Sbjct: 665 SSVIVLRNMVTPDDIDEYLEGEIREECGKFGTVLDVVI-----ANFASSGVVKIFVKYAD 719
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
S Q +A LDGRFFGG V+A YD+ F
Sbjct: 720 SMQVDRAKAALDGRFFGGNSVKAEAYDQILF 750
>gi|134058410|emb|CAK47897.1| unnamed protein product [Aspergillus niger]
Length = 549
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR----------------RAGVI 253
GQ A+R+MAK GW +G GLG GI PL + + R +I
Sbjct: 373 GQKGFAERLMAKYGWTKGSGLGATGSGIVKPLQVKVEKQKKRPDSEGGGFATPAGRGKII 432
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE---------DEVGSECA-K 303
A +N+ E K GP + V++L+ M+ ++D EL E+G EC+ K
Sbjct: 433 GGARKNEEEGKF------GPMSEVIILKGMLDGMDLDAELAGDGEGGGLMQEIGEECSEK 486
Query: 304 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
YG V RV I + P PV FV+F +A+ L+GR F G + A FYD
Sbjct: 487 YGRVERVFIPRDSAPPVPV------FVKFTNQLSALRAVNALEGRIFSGNAITARFYDVH 540
Query: 364 RFSK 367
F +
Sbjct: 541 TFEQ 544
>gi|17510025|ref|NP_491176.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
gi|373220165|emb|CCD72565.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
Length = 749
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ V++LRNMV P ++D+ LE E+ EC KYG V V+I NF V+IFV++
Sbjct: 657 SNVIVLRNMVTPQDIDEFLEGEIREECGKYGNVIDVVI-----ANFASSGLVKIFVKYSD 711
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
S Q +A LDGRFFGG V+A YD+ F
Sbjct: 712 SMQVDRAKAALDGRFFGGNTVKAEAYDQILF 742
>gi|350632054|gb|EHA20422.1| hypothetical protein ASPNIDRAFT_213266 [Aspergillus niger ATCC
1015]
Length = 528
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR----------------RAGVI 253
GQ A+R+MAK GW +G GLG GI PL + + R +I
Sbjct: 353 GQKGFAERLMAKYGWTKGSGLGATGSGIVKPLQVKVEKQKKRPDSEGGGFATPAGRGKII 412
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE---------DEVGSECA-K 303
A +N+ E K GP + V++L+ M+ ++D EL E+G EC+ K
Sbjct: 413 GGARKNEEEGKF------GPMSEVIILKGMLDGMDLDAELAGDGEGGGLMQEIGEECSEK 466
Query: 304 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
YG V RV I + P PV FV+F +A+ L+GR F G + A FYD
Sbjct: 467 YGRVERVFIPRDSAPPVPV------FVKFTNQLSALRAVNALEGRIFSGNAITARFYDVH 520
Query: 364 RFSK 367
F +
Sbjct: 521 TFEQ 524
>gi|358365996|dbj|GAA82617.1| G-patch DNA repair protein [Aspergillus kawachii IFO 4308]
Length = 530
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR----------------RAGVI 253
GQ A+R+MAK GW +G GLG GI PL + + R +I
Sbjct: 354 GQKGFAERLMAKYGWTKGSGLGATGTGIVKPLQVKVEKQKKRPDSEGGGFATPAGRGKII 413
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE---------DEVGSECA-K 303
A +N+ E K GP + V++L+ M+ ++D EL E+G EC+ K
Sbjct: 414 GGARKNEEEGKF------GPMSEVIILKGMLDGMDLDAELAGDSEGGGLMQEIGEECSEK 467
Query: 304 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
YG V RV I + P PV FV+F +A+ L+GR F G + A FYD
Sbjct: 468 YGRVERVFIPRDSAPPVPV------FVKFTNQLSALRAVNALEGRIFSGNAITARFYDVH 521
Query: 364 RFSK 367
F +
Sbjct: 522 TFEQ 525
>gi|237836525|ref|XP_002367560.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211965224|gb|EEB00420.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221484014|gb|EEE22318.1| hypothetical protein TGGT1_018190 [Toxoplasma gondii GT1]
gi|221505287|gb|EEE30941.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 532
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
V+LL NMV P EVD EL+DEV EC+K+G++ RV + + E VRIFV+F
Sbjct: 444 VVLLSNMVTPSEVDGELKDEVREECSKFGSIKRVEVHTL-------KETVRIFVEFSDLS 496
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+A+ L GR+FGGR + A YD+E F + E
Sbjct: 497 GAREAIPSLHGRWFGGRQIIANTYDQELFHQGE 529
>gi|440474098|gb|ELQ42865.1| hypothetical protein OOU_Y34scaffold00192g51 [Magnaporthe oryzae
Y34]
gi|440485924|gb|ELQ65840.1| hypothetical protein OOW_P131scaffold00455g53 [Magnaporthe oryzae
P131]
Length = 557
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 110/257 (42%), Gaps = 53/257 (20%)
Query: 155 NMSGEEAWKRRAAMSS-----------GGVPPRSPSPPPVNVES----GGGGGGFTIGKS 199
+ +G++A+ RR A+S VP + S PV E G I +
Sbjct: 306 DATGDDAYARRLALSKVKEVETPPPQPDAVPAATISRAPVRYEPTPLPNEDGEDMDIDED 365
Query: 200 ETSGLGLGAG-------------GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKT 246
E GLG+ GQ A RMM KMGW++G+GLG +E GIT+ L +
Sbjct: 366 EGERPGLGSAKPKDSDDVRSNRPGQAGFAARMMEKMGWEKGKGLGAEETGITSGLSVKVE 425
Query: 247 DRR------AGVIVN----ASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDD 291
RR G + A + V+ V G + V+ L M+ GEV +
Sbjct: 426 KRRKRPDAEGGGFASPGNMARVVGGNRGVQDVGKFGSMSEVVALGGMLEGMEDVAGEVAE 485
Query: 292 ELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFF 350
L E+G EC KYG V R+ + T ++F++F +A+ LDGR F
Sbjct: 486 GLAQEIGEECGEKYGRVERLYVDVNTR---------QVFIKFTDQVSALRAVNALDGRIF 536
Query: 351 GGRVVRATFYDEERFSK 367
G VR FYD ERF +
Sbjct: 537 NGNEVRPRFYDLERFEQ 553
>gi|291231691|ref|XP_002735797.1| PREDICTED: poly-U binding splicing factor 60KDa-like [Saccoglossus
kowalevskii]
Length = 528
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFE 333
+RV++L NMV ++DDELE EV EC K+G V+RV+I++ + E ++IFV+F
Sbjct: 430 SRVMVLLNMVSIEDLDDELEGEVTEECGKFGNVSRVIIYQEKQGEEEDAEVIIKIFVEFS 489
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ A+ L+GR+FGGR+V+ YD+ +F +L+
Sbjct: 490 LPSEAETAIASLNGRWFGGRLVKGETYDQAKFDAGDLS 527
>gi|326484114|gb|EGE08124.1| G-patch DNA repair protein [Trichophyton equinum CBS 127.97]
Length = 534
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR-----------------RAGV 252
GQ A+R++ K GW +G GLG E GI PL + + R +
Sbjct: 362 GQKGFAERLLTKYGWTKGSGLGANESGIVNPLQVKVQKQKKKADSEGRGVAPPGGPRGKI 421
Query: 253 IVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECA-KYGT 306
I + + + K GP + V++L MV ++D ELE E+G EC KYG
Sbjct: 422 IGGGRKQEEQGKF------GPMSDVVILHGMVDGLDLDAELESGELMQEIGDECGEKYGR 475
Query: 307 VTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V RV I ++ PV F++F +A+ L+GR F G + A F+D ERF
Sbjct: 476 VERVYIDRNSKDRIPV------FIKFTNQLSALRAVNALEGRIFNGNTITARFFDSERF 528
>gi|326469980|gb|EGD93989.1| G-patch DNA repair protein [Trichophyton tonsurans CBS 112818]
Length = 534
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR-----------------RAGV 252
GQ A+R++ K GW +G GLG E GI PL + + R +
Sbjct: 362 GQKGFAERLLTKYGWTKGSGLGANESGIVNPLQVKVQKQKKKADSEGRGVAPPGGPRGKI 421
Query: 253 IVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECA-KYGT 306
I + + + K GP + V++L MV ++D ELE E+G EC KYG
Sbjct: 422 IGGGRKQEEQGKF------GPMSDVVILHGMVDGLDLDAELESGELMQEIGDECGEKYGR 475
Query: 307 VTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V RV I ++ PV F++F +A+ L+GR F G + A F+D ERF
Sbjct: 476 VERVYIDRNSKDRIPV------FIKFTNQLSALRAVNALEGRIFNGNTITARFFDSERF 528
>gi|389628838|ref|XP_003712072.1| hypothetical protein MGG_06188 [Magnaporthe oryzae 70-15]
gi|351644404|gb|EHA52265.1| hypothetical protein MGG_06188 [Magnaporthe oryzae 70-15]
Length = 457
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 110/257 (42%), Gaps = 53/257 (20%)
Query: 155 NMSGEEAWKRRAAMSS-----------GGVPPRSPSPPPVNVES----GGGGGGFTIGKS 199
+ +G++A+ RR A+S VP + S PV E G I +
Sbjct: 206 DATGDDAYARRLALSKVKEVETPPPQPDAVPAATISRAPVRYEPTPLPNEDGEDMDIDED 265
Query: 200 ETSGLGLGAG-------------GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKT 246
E GLG+ GQ A RMM KMGW++G+GLG +E GIT+ L +
Sbjct: 266 EGERPGLGSAKPKDSDDVRSNRPGQAGFAARMMEKMGWEKGKGLGAEETGITSGLSVKVE 325
Query: 247 DRR------AGVIVN----ASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDD 291
RR G + A + V+ V G + V+ L M+ GEV +
Sbjct: 326 KRRKRPDAEGGGFASPGNMARVVGGNRGVQDVGKFGSMSEVVALGGMLEGMEDVAGEVAE 385
Query: 292 ELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFF 350
L E+G EC KYG V R+ + T ++F++F +A+ LDGR F
Sbjct: 386 GLAQEIGEECGEKYGRVERLYVDVNTR---------QVFIKFTDQVSALRAVNALDGRIF 436
Query: 351 GGRVVRATFYDEERFSK 367
G VR FYD ERF +
Sbjct: 437 NGNEVRPRFYDLERFEQ 453
>gi|66826919|ref|XP_646814.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60474638|gb|EAL72575.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 372
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVR 327
+ ++ PT++LLL N+ E+D ELE+++ E KYG V RV+I IT E VR
Sbjct: 273 IQYSKVPTKILLLLNITTRSEIDSELEEDMLDEFKKYGKVNRVVIHPITNQ-----EQVR 327
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
IF+ F+ T AL ++ R+F R V A +Y E F KN+L P
Sbjct: 328 IFIYFDDVNSTRDALSQMNNRYFAKRKVEAHYYKENLFFKNKLDP 372
>gi|242766189|ref|XP_002341123.1| G-patch DNA repair protein (Drt111), putative [Talaromyces
stipitatus ATCC 10500]
gi|218724319|gb|EED23736.1| G-patch DNA repair protein (Drt111), putative [Talaromyces
stipitatus ATCC 10500]
Length = 539
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 37/181 (20%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR----------------RAGVI 253
GQ A+R+MAK GW +G GLG GI PL + + R +I
Sbjct: 365 GQKGFAERLMAKYGWTKGSGLGASGTGIVNPLQVKVEKQKKKPDSEGGGFATPAGRGKII 424
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELED--------EVGSEC-AKY 304
+ +N+ E K GP + V++L M+ ++ EL++ E+G EC KY
Sbjct: 425 ASKKKNEEEGKF------GPMSEVIVLYGMLDGMDLATELDNSQNGGLMQEIGEECNEKY 478
Query: 305 GTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
G V RV I + PV FV+F +A+ L+GR F G + A FYD E+
Sbjct: 479 GRVERVFIHRQSNDRIPV------FVKFTAQLSALRAVNALEGRMFNGNKITARFYDTEK 532
Query: 365 F 365
F
Sbjct: 533 F 533
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
T ++LL NMVGP E+DDEL++EV EC+KYG V V I + P D VRIFV FE
Sbjct: 597 TNIILLTNMVGPDEIDDELKEEVKIECSKYGKVYDVRIHVSNNISKPSDR-VRIFVVFES 655
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
A+ L+ R+FGG V + Y+ ER+ + L
Sbjct: 656 PSMAQIAVPALNNRWFGGNQVFCSLYNTERYYSSFL 691
>gi|149020992|gb|EDL78599.1| RNA binding motif protein 17, isoform CRA_b [Rattus norvegicus]
Length = 338
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 122/288 (42%), Gaps = 88/288 (30%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 73 PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 128
Query: 133 QEGEERERREREERENASASRL------------------NMSG---------------- 158
+E EERE+R ++ E + SR +M G
Sbjct: 129 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEL 188
Query: 159 ------EEAWKRRAAMSSGGVPP---------RSPSPPPVNVESGGGGGGFTIGKSETSG 203
EE + R+ S +PP RSP+ P + + GG
Sbjct: 189 PRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTGPSNSFLANMGG------------ 236
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKS 261
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +A+E
Sbjct: 237 ---------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGE 287
Query: 262 EKKVKSVNFNGP-------PTRVLLLRNMVGPGEVDDELEDEVGSECA 302
+ + + P PT+V+LLRNMVG GEVD++LE E E +
Sbjct: 288 SQDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEEYS 335
>gi|358439934|pdb|3UE2|A Chain A, Crystal Structure Of A Rna Binding Domain Of Poly-U
Binding Splicing Factor 60kda (Puf60) From Homo Sapiens
At 1.23 A Resolution
gi|371927677|pdb|3US5|A Chain A, Crystal Structure Of A Rna-Binding Domain Of A Poly-U
Binding Splicing Factor 60kda (Puf60) From Homo Sapiens
At 1.38 A Resolution
Length = 118
Score = 81.6 bits (200), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE-AVRIFVQFE 333
+ V +LRN V P ++DD+LE EV EC K+G V RV+I++ + E V+IFV+F
Sbjct: 20 STVXVLRNXVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS 79
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 80 IASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 117
>gi|428673067|gb|EKX73980.1| hypothetical protein BEWA_040180 [Babesia equi]
Length = 431
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 132/327 (40%), Gaps = 79/327 (24%)
Query: 98 EEYDPARPNDYEDYRREKKKKAVDAEIRRELE---------------------------- 129
EEYDP+ PNDYE R KA + +
Sbjct: 126 EEYDPSLPNDYEKVSRIMSAKAASKDTTHIQDPPSVSSGFSFAPPTASTSMPSATPSYKP 185
Query: 130 -RRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPS-PPPVNVES 187
+ E E + + R N+S S SG+E RR A +P+ P+ V +
Sbjct: 186 AEKVAEAESKPKLSGLSRCNSSHS----SGDEMLMRRLAAMEAQESSEAPTVATPIQVHA 241
Query: 188 GGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTD 247
+ + + S + AQ+MM KMGWKEG+GLG+ QG+ TPL+A+ +
Sbjct: 242 PPAAEKSSAREPKASSI----------AQKMMEKMGWKEGEGLGKHGQGMATPLVAQSFN 291
Query: 248 RRAGVIVNAS--ENKSEKKVKSV----------NFNGPPTRVLLLRNMVGPGEVDDELED 295
+R G IVNA+ +K + + K + N ++LL MV +ELE+
Sbjct: 292 KRTGKIVNAAPIPSKGQGQTKPPAVPTPPTVPDSANASRIVIILLDKMVDM----EELEE 347
Query: 296 EVGSECAKYGTVTRVLIFE---------------ITEPNFPVDEAVRIFVQFERSEQTTK 340
VG +YG++ V E N D ++ ++E E++ +
Sbjct: 348 TVG----EYGSIVNVKDLEGNVDIALNGVEGSSGYKWVNTIKDSGAQLLCEYETLEESKR 403
Query: 341 ALIDLDGRFFGGRVVRATFYDEERFSK 367
A+++LD V A ++ E +S+
Sbjct: 404 AIMELDNSLILQSRVTADYFPEALYSR 430
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ V+LL NM+GP EVDDEL++EV EC+KYG V V I + P D VRIFV FE
Sbjct: 437 SNVILLTNMIGPEEVDDELKEEVKIECSKYGKVYDVRIHISDHVSKPSDR-VRIFVVFET 495
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+ A+ L+ R+FGG V Y+ ERF
Sbjct: 496 NTMAQIAVPALNNRWFGGNQVYCRLYNTERF 526
>gi|353229125|emb|CCD75296.1| putative fuse-binding protein-interacting repressor siahbp1
[Schistosoma mansoni]
Length = 520
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEIT--EPNFPVDEAVRIFVQFER 334
VL+LRNMVGP + DDELE EV EC+KYG V +VLI + + E N ++ V IFV F
Sbjct: 426 VLILRNMVGPEDCDDELEGEVAGECSKYGLVEKVLIHQDSAHETN---EQFVNIFVVFSD 482
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
A L+ R+F GR + A YD E F N+L+
Sbjct: 483 PCSVHNAANALNKRYFAGRQITAEPYDVEAFMMNDLS 519
>gi|256072869|ref|XP_002572756.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 520
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEIT--EPNFPVDEAVRIFVQFER 334
VL+LRNMVGP + DDELE EV EC+KYG V +VLI + + E N ++ V IFV F
Sbjct: 426 VLILRNMVGPEDCDDELEGEVAGECSKYGLVEKVLIHQDSAHETN---EQFVNIFVVFSD 482
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
A L+ R+F GR + A YD E F N+L+
Sbjct: 483 PCSVHNAANALNKRYFAGRQITAEPYDVEAFMMNDLS 519
>gi|119501172|ref|XP_001267343.1| G-patch DNA repair protein (Drt111), putative [Neosartorya fischeri
NRRL 181]
gi|119415508|gb|EAW25446.1| G-patch DNA repair protein (Drt111), putative [Neosartorya fischeri
NRRL 181]
Length = 537
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ A+R++AK GW +G GLG GI PL + K +R G + A K
Sbjct: 360 GQKGFAERLLAKYGWTKGSGLGATGSGIVKPLQVKVEKQKKRPDSEGGGFVTPAGRGKII 419
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
K + G + V++L+ M+ +VD ELE E+G EC+ KYG V R
Sbjct: 420 GGKRKAEEEEGKFGCMSEVIILKGMLDGMDVDAELEGDQDGGLMQEIGEECSEKYGRVER 479
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V I + P PV FV+F +A+ L+GR F G + A FYD ++F
Sbjct: 480 VFISRESGPPVPV------FVKFTNQLSALRAVNALEGRVFNGNTITARFYDTQKF 529
>gi|70994730|ref|XP_752142.1| G-patch DNA repair protein (Drt111) [Aspergillus fumigatus Af293]
gi|66849776|gb|EAL90104.1| G-patch DNA repair protein (Drt111), putative [Aspergillus
fumigatus Af293]
Length = 534
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ A+R++AK GW +G GLG GI PL + K +R G + A K
Sbjct: 357 GQKGFAERLLAKYGWTKGSGLGATGSGIVKPLQVKVEKQKKRPDSEGGGFVTPAGRGKII 416
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
K + G + V++L+ M+ +VD ELE E+G EC+ KYG V R
Sbjct: 417 GGKRKAEEEEGKFGRMSEVIILKGMLDGMDVDAELEGDQDGGLIQEIGEECSEKYGRVER 476
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V I + P PV FV+F +A+ L+GR F G + A FYD ++F
Sbjct: 477 VFISRESGPPVPV------FVKFTNQLSALRAVNALEGRVFNGNTITARFYDTQKF 526
>gi|159124943|gb|EDP50060.1| G-patch DNA repair protein (Drt111), putative [Aspergillus
fumigatus A1163]
Length = 534
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ A+R++AK GW +G GLG GI PL + K +R G + A K
Sbjct: 357 GQKGFAERLLAKYGWTKGSGLGATGSGIVKPLQVKVEKQKKRPDSEGGGFVTPAGRGKII 416
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
K + G + V++L+ M+ +VD ELE E+G EC+ KYG V R
Sbjct: 417 GGKRKAEEEEGKFGRMSEVIILKGMLDGMDVDAELEGDQDGGLIQEIGEECSEKYGRVER 476
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V I + P PV FV+F +A+ L+GR F G + A FYD ++F
Sbjct: 477 VFISRESGPPVPV------FVKFTNQLSALRAVNALEGRVFNGNTITARFYDTQKF 526
>gi|198416925|ref|XP_002124386.1| PREDICTED: similar to poly-U binding splicing factor 60 [Ciona
intestinalis]
Length = 511
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEIT---EPNFPVDEAVRIFVQ 331
++V+++RNMV ++D++LE EV EC K+G+V RV+I++ E N V V+IFV+
Sbjct: 413 SQVMVMRNMVTVEDLDEDLEAEVTEECGKFGSVERVVIYQEKQGEEENAEV--IVKIFVE 470
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F + KA++ L+ R+FGG V AT Y +R+S N+L
Sbjct: 471 FSNLAECEKAVMALNNRWFGGNKVTATHYSYQRYSANDL 509
>gi|315056853|ref|XP_003177801.1| hypothetical protein MGYG_01864 [Arthroderma gypseum CBS 118893]
gi|311339647|gb|EFQ98849.1| hypothetical protein MGYG_01864 [Arthroderma gypseum CBS 118893]
Length = 529
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 35/179 (19%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPL-----------------MARKTDRRAGV 252
GQ A+R++ K GW +G GLG E GI PL A R +
Sbjct: 357 GQKGFAERLLTKYGWTKGSGLGANESGIVNPLQVKVQKQKKKPDSEGGGAATPGGPRGKI 416
Query: 253 IVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECA-KYGT 306
I A + + K GP + V++L MV ++D ELE E+G EC KYG
Sbjct: 417 IGGARKQEEHGKF------GPMSDVIILHGMVDGLDLDAELESGDLMQEIGDECGEKYGR 470
Query: 307 VTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V RV I ++ PV F++F +A+ L+GR F G + A F++ E+F
Sbjct: 471 VERVYIDRNSKDRIPV------FIKFTNQLSALRAVNALEGRIFNGNTITARFFESEKF 523
>gi|358387906|gb|EHK25500.1| hypothetical protein TRIVIDRAFT_116107, partial [Trichoderma virens
Gv29-8]
Length = 498
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS-----ENKSE-- 262
GQ AQR+M K GW +G LG E GI PL + RR + NK +
Sbjct: 332 GQAGFAQRLMTKYGWTKGSALGANESGILNPLRVQVEKRRKKADADGGGWAEPANKGKIL 391
Query: 263 --KKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVTRVLIFE 314
K+ + G + V++L+NM+ E+ D L E+G EC KYG V R+ I
Sbjct: 392 GGKRKEETGKFGIMSDVVVLQNMLENMPDLEAEIADGLGQEIGGECGEKYGRVERLYIDV 451
Query: 315 ITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
T ++F++F +A+ +LDGR F G + FYD ERF +
Sbjct: 452 DTR---------QVFIKFTDQVSALRAVNELDGRVFNGNTIIPKFYDTERFEQ 495
>gi|255949866|ref|XP_002565700.1| Pc22g17910 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592717|emb|CAP99079.1| Pc22g17910 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 521
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 28/179 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R+++K GW +G GLG G+ PL + R+ G I A K
Sbjct: 345 GQQGFAERLLSKYGWTKGSGLGATGSGMVKPLEVKIEKRKKRPDSEGGGFITPAGRGKII 404
Query: 261 -SEKK--VKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSEC-AKYGTVT 308
S KK ++ F GP ++V++L+ M+ ++D E+E E+G EC KYGTV
Sbjct: 405 GSNKKGEYETSKF-GPMSQVVILQGMLQGMDLDAEIERSDGGGLVQEIGGECNEKYGTVE 463
Query: 309 RVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
RV I V V +FV+F +A+ L+GR F G + A F+D E+F +
Sbjct: 464 RVFIARD------VGTPVPVFVKFRDPLSGLRAVNALEGRVFNGNTITARFFDLEKFEQ 516
>gi|195355937|ref|XP_002044441.1| GM11755 [Drosophila sechellia]
gi|194130809|gb|EDW52852.1| GM11755 [Drosophila sechellia]
Length = 450
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 34/136 (25%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE-------------- 258
+ A ++MAK G+K+GQGLG+ EQG+ L KT +R G I++ +
Sbjct: 7 SVAAKIMAKYGFKDGQGLGKSEQGMAMALQVEKTSKRGGRIIHEKDVFLPPLALSPPAIC 66
Query: 259 -------------------NKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGS 299
SE P++V+LLRNMVGPG+VD+ELE EV
Sbjct: 67 SQIGTSPSHKAMPPPQMVGTASESGDSITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKD 126
Query: 300 EC-AKYGTVTRVLIFE 314
EC KYG V V+I E
Sbjct: 127 ECNTKYGEVNSVIIHE 142
>gi|258568248|ref|XP_002584868.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906314|gb|EEP80715.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 559
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ A+R++AK GW +G GLG GI PL + K +R G + A K
Sbjct: 385 GQKGFAERLLAKYGWTKGSGLGASGTGIINPLQVKVEKQKKRPDAEGGGFVTPAGRGKII 444
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+KK F G + V++L MV +++ ELE E+G EC KYG V R
Sbjct: 445 GGKQKKQDEGKF-GAMSEVIVLHGMVDGMDLNAELEAGEDGGLIQEIGEECGEKYGRVER 503
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V + +E PV FV+F +A+ L+GR F G + A F+D E+F
Sbjct: 504 VFVDRNSEGQVPV------FVKFTNQLSALRAVNALEGRVFNGNTITARFFDVEKF 553
>gi|67528400|ref|XP_662002.1| hypothetical protein AN4398.2 [Aspergillus nidulans FGSC A4]
gi|40741125|gb|EAA60315.1| hypothetical protein AN4398.2 [Aspergillus nidulans FGSC A4]
gi|259482791|tpe|CBF77608.1| TPA: G-patch DNA repair protein (Drt111), putative (AFU_orthologue;
AFUA_4G06840) [Aspergillus nidulans FGSC A4]
Length = 523
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 25/177 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R++AK GW +G GLG GI PL + R+ G + A K
Sbjct: 348 GQKGFAERLLAKYGWTKGSGLGATGSGIAKPLQVQVEKRKKRPDSEGGGFVTPAGRGKII 407
Query: 261 -SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTRV 310
+K + V G + V++L+ M+ +VD EL E+G EC+ KYG V RV
Sbjct: 408 GGARKQEDVGKFGAMSEVIILKGMLDGMDVDAELAGSEGGGLMQEIGEECSEKYGRVERV 467
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
I + P V +FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 468 YISRESGP------PVLVFVKFTNQLSALRAVNALEGRIFNGNKITARFFDAQKFEQ 518
>gi|119188143|ref|XP_001244678.1| hypothetical protein CIMG_04119 [Coccidioides immitis RS]
Length = 535
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ A+R+++K GW +G GLG GI PL + K +R G A K
Sbjct: 361 GQKGFAERLLSKYGWTKGSGLGASGTGIVNPLQVKVQKQKKRPDAEGGGFATPAGRGKII 420
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+KK + F G + V++L M+ ++D ELE E+G EC KYG V R
Sbjct: 421 GGHQKKQEEGKF-GAMSEVVVLHGMLDGMDLDAELEAGDDGGLMQEIGDECGEKYGRVER 479
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + PV FV+F +A+ L+GR F G + A F+D E+F K
Sbjct: 480 VFIDRSAKGQVPV------FVKFTNQLSALRAVNALEGRIFNGNTITARFFDTEKFEK 531
>gi|303316530|ref|XP_003068267.1| G-patch domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240107948|gb|EER26122.1| G-patch domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 535
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ A+R+++K GW +G GLG GI PL + K +R G A K
Sbjct: 361 GQKGFAERLLSKYGWTKGSGLGASGTGIVNPLQVKVQKQKKRPDAEGGGFATPAGRGKII 420
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+KK + F G + V++L M+ ++D ELE E+G EC KYG V R
Sbjct: 421 GGHQKKQEEGKF-GAMSEVVVLHGMLDGMDLDAELEAGDDGGLMQEIGDECGEKYGRVER 479
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + PV FV+F +A+ L+GR F G + A F+D E+F K
Sbjct: 480 VFIDRSAKGQVPV------FVKFTNQLSALRAVNALEGRIFNGNTITARFFDTEKFEK 531
>gi|452842837|gb|EME44773.1| hypothetical protein DOTSEDRAFT_152803 [Dothistroma septosporum
NZE10]
Length = 561
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Query: 208 AGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK 260
A GQ A+R+MAKMG+++GQGLG GITT ++ + R+ G + A+ K
Sbjct: 386 APGQAGFAERLMAKMGYQKGQGLGADGSGITTAIVMKAEKRKKKSDAEGGGYVAPANMGK 445
Query: 261 SEKKVKSVNFNGPP-----TRVLLLRNMVGPGEVDDELED-----EVGSECAKYGTVTRV 310
K N + V+ L M+ +VD E++D EVG E ++G V R+
Sbjct: 446 IVGGKKKKTENAESETDAMSEVIKLEGMLANMDVDKEIQDNNLMQEVGDELGEFGKVERL 505
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
I+ DE +FV+F +A+ ++DG F VV+A F+D E+F K E
Sbjct: 506 FIWRKNAGG--NDE---VFVKFTSPLSALRAVREMDGVEFADNVVKAAFFDVEKFEKGEY 560
>gi|320038037|gb|EFW19973.1| G-patch DNA repair protein [Coccidioides posadasii str. Silveira]
Length = 537
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ A+R+++K GW +G GLG GI PL + K +R G A K
Sbjct: 363 GQKGFAERLLSKYGWTKGSGLGASGTGIVNPLQVKVQKQKKRPDAEGGGFATPAGRGKII 422
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+KK + F G + V++L M+ ++D ELE E+G EC KYG V R
Sbjct: 423 GGHQKKQEEGKF-GAMSEVVVLHGMLDGMDLDAELEAGDDGGLMQEIGDECGEKYGRVER 481
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + PV FV+F +A+ L+GR F G + A F+D E+F K
Sbjct: 482 VFIDRSAKGQVPV------FVKFTNQLSALRAVNALEGRIFNGNTITARFFDTEKFEK 533
>gi|67624203|ref|XP_668384.1| RNA-binding protein SiahBP [Cryptosporidium hominis TU502]
gi|54659576|gb|EAL38146.1| RNA-binding protein SiahBP [Cryptosporidium hominis]
Length = 615
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 276 RVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERS 335
++LL NMVGP E+DDEL++EV EC+KYG V V I + P D VRIFV FE
Sbjct: 520 NIILLTNMVGPDEIDDELKEEVKIECSKYGKVYDVRIHVSNNISKPSDR-VRIFVVFESP 578
Query: 336 EQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
A+ L+ R+FGG V + Y+ ER+ + L
Sbjct: 579 SMAQIAVPALNNRWFGGNQVFCSLYNTERYYSSFL 613
>gi|425782867|gb|EKV20748.1| G-patch DNA repair protein, putative [Penicillium digitatum Pd1]
Length = 555
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAGVIVN-------- 255
GQ RM+ K GWKEG GLG G+ PL R+ D G V
Sbjct: 379 GQAEFGSRMLHKWGWKEGSGLGATGSGMVKPLQVKLEKRKRRPDSEGGGFVTPAGRGKII 438
Query: 256 ASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGT 306
S NK E + GP + V+ L M+ ++D E+E E+G EC KYG
Sbjct: 439 GSNNKGEYETSKF---GPMSEVVKLLGMLDGMDLDAEMERGENGGLMQEIGQECGDKYGP 495
Query: 307 VTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
V RV I V V +F++F+ +A+ L+GR F G + A F+D E+F
Sbjct: 496 VERVFIARD------VGTPVPVFIKFKHPLSGLRAVNALEGRIFNGNTIVARFFDLEKFD 549
Query: 367 K 367
+
Sbjct: 550 Q 550
>gi|425781640|gb|EKV19592.1| G-patch DNA repair protein, putative [Penicillium digitatum PHI26]
Length = 556
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAGVIVN-------- 255
GQ RM+ K GWKEG GLG G+ PL R+ D G V
Sbjct: 380 GQAEFGSRMLHKWGWKEGSGLGATGSGMVKPLQVKLEKRKRRPDSEGGGFVTPAGRGKII 439
Query: 256 ASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGT 306
S NK E + GP + V+ L M+ ++D E+E E+G EC KYG
Sbjct: 440 GSNNKGEYETSKF---GPMSEVVKLLGMLDGMDLDAEMERGENGGLMQEIGQECGDKYGP 496
Query: 307 VTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
V RV I V V +F++F+ +A+ L+GR F G + A F+D E+F
Sbjct: 497 VERVFIARD------VGTPVPVFIKFKHPLSGLRAVNALEGRIFNGNTIVARFFDLEKFD 550
Query: 367 K 367
+
Sbjct: 551 Q 551
>gi|327301701|ref|XP_003235543.1| G-patch DNA repair protein [Trichophyton rubrum CBS 118892]
gi|326462895|gb|EGD88348.1| G-patch DNA repair protein [Trichophyton rubrum CBS 118892]
Length = 534
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 33/178 (18%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRA----------------GVI 253
GQ A+R++ K GW +G GLG E GI PL + ++ G I
Sbjct: 362 GQKGFAERLLTKYGWTKGSGLGANESGIVNPLQVKVQKQKKKSDSEGRGVAPPGGPRGKI 421
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECA-KYGTV 307
V + E+ F GP + V++L MV ++D ELE E+G EC KYG V
Sbjct: 422 VGGGRKQEEQG----KF-GPMSDVVILHGMVDGLDLDAELESGELMQEIGDECGEKYGRV 476
Query: 308 TRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
RV I ++ PV F++F +A+ L+GR F G + A F+D E F
Sbjct: 477 ERVYIDRNSKDRIPV------FIKFTNQLSALRAVNALEGRIFNGNTITARFFDSESF 528
>gi|449667931|ref|XP_002156035.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Hydra
magnipapillata]
Length = 597
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEI---TEPNFPVDEAVRIFVQFE 333
VL+L+NMV EVD+EL+ EV EC+++G V RV+I++ E N V V+IFV+F
Sbjct: 501 VLVLKNMVTSDEVDEELQTEVTEECSRFGDVVRVVIYQERQGEEDNAEV--IVKIFVEFS 558
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+ + A L+GR+FGG ++A YDE+++
Sbjct: 559 KHSEAESAQSALNGRWFGGNSIQADIYDEDKY 590
>gi|148676070|gb|EDL08017.1| RNA binding motif protein 17, isoform CRA_b [Mus musculus]
Length = 352
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 118/279 (42%), Gaps = 88/279 (31%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 97 PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKV----VKRQREERQRQRELERQ 152
Query: 133 QEGEERERREREERENASASRL------------------NMSG---------------- 158
+E EERE+R ++ E + SR +M G
Sbjct: 153 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEL 212
Query: 159 ------EEAWKRRAAMSSGGVPP---------RSPSPPPVNVESGGGGGGFTIGKSETSG 203
EE + R+ S +PP RSP+ P + + GG
Sbjct: 213 PRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTGPSNSFLANMGG------------ 260
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKS 261
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +A+E
Sbjct: 261 ---------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGE 311
Query: 262 EKKVKSVNFNGP-------PTRVLLLRNMVGPGEVDDEL 293
+ + + P PT+V+LLRNMVG GEVD++L
Sbjct: 312 AQDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDL 350
>gi|339244819|ref|XP_003378335.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
gi|316972769|gb|EFV56420.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
Length = 609
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
VL+LRN++ P EVD+ L++E+ EC K+G V +V+I++ +PN V+IFV++ E
Sbjct: 515 VLVLRNVISPEEVDEYLQEEITEECGKFGEVEQVVIYQ-EKPNEDAPAIVKIFVKYSNPE 573
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ KA RFF GR + A YD+ F +L+
Sbjct: 574 EAEKAQSTFHNRFFSGRQITAELYDQTMFDLQDLS 608
>gi|391343712|ref|XP_003746150.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Metaseiulus
occidentalis]
Length = 562
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA----VRIFVQF 332
V++LRNMVG EVD++LE E+ EC K+G V +VLI E + D+A V+IFV+F
Sbjct: 465 VMILRNMVGADEVDEDLEPEISEECGKFGKVQKVLIH--MERHGEEDDASTTDVKIFVEF 522
Query: 333 ERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ + +A+ L GRFFGGR V A YD + L+
Sbjct: 523 GSTAEMHQAIRALHGRFFGGRQVIAEMYDVFLYDNGNLS 561
>gi|240280044|gb|EER43548.1| G-patch DNA repair protein [Ajellomyces capsulatus H143]
Length = 534
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R+++K GW +G GLG +GI PL + ++ G+ A
Sbjct: 360 GQKGFAERLLSKYGWTKGSGLGASGEGIVKPLQVKLEKQKKKPASEGGGLATPAGRANIV 419
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELED--------EVGSECA-KYGTVTR 309
++KK + F G + V++L MV ++D ELE+ E+G ECA KYG V R
Sbjct: 420 GGNQKKSEDGKF-GRMSEVVVLHGMVDGMDLDAELENGEGGGLMQEIGDECAEKYGRVER 478
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + PV FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 479 VFIDRNSPGKIPV------FVKFTSQLSALRAVNALEGRIFNGNTIIARFFDVDKFEQ 530
>gi|317146258|ref|XP_001821397.2| G-patch DNA repair protein [Aspergillus oryzae RIB40]
Length = 536
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ AQR++ K GW +G GLG GI PL + K +R G A K
Sbjct: 362 GQKGFAQRLLEKYGWTKGSGLGATGTGIVNPLQVKVEKQKKRPDSEGGGFATPAGRGKII 421
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+ KK F G + V++L+ M+ +V+ ELE E+G EC+ KYG V R
Sbjct: 422 GGARKKEDEGKF-GQMSEVVILKGMLDGMDVEAELEGDQDGGLMQEIGDECSEKYGNVER 480
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + P PV FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 481 VFIARGSAPPVPV------FVKFTNQLSALRAVNALEGRIFNGNPITARFFDTQKFEQ 532
>gi|312375119|gb|EFR22549.1| hypothetical protein AND_14557 [Anopheles darlingi]
Length = 295
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFE--ITEPNFPVDE----AVRI 328
++V++LRNMVGP EVD+ LE+E+ EC KYG V RV+I++ +E N+ D+ V+I
Sbjct: 192 SKVVILRNMVGPEEVDEMLEEEIQDECGKYGDVKRVIIYKERQSEGNYADDDFTDMIVKI 251
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
FV+F + + KA L+GR+FGGR+V+A YD+ + +L+
Sbjct: 252 FVEFSEATEADKARDALNGRYFGGRLVKAESYDQALYDHGDLS 294
>gi|238491878|ref|XP_002377176.1| G-patch DNA repair protein (Drt111), putative [Aspergillus flavus
NRRL3357]
gi|220697589|gb|EED53930.1| G-patch DNA repair protein (Drt111), putative [Aspergillus flavus
NRRL3357]
Length = 544
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ AQR++ K GW +G GLG GI PL + K +R G A K
Sbjct: 370 GQKGFAQRLLEKYGWTKGSGLGATGTGIVNPLQVKVEKQKKRPDSEGGGFATPAGRGKII 429
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+ KK F G + V++L+ M+ +V+ ELE E+G EC+ KYG V R
Sbjct: 430 GGARKKEDEGKF-GQMSEVVILKGMLDGMDVEAELEGDQDGGLMQEIGDECSEKYGNVER 488
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + P PV FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 489 VFIARGSAPPVPV------FVKFTNQLSALRAVNALEGRIFNGNPITARFFDTQKFEQ 540
>gi|325088765|gb|EGC42075.1| G-patch DNA repair protein [Ajellomyces capsulatus H88]
Length = 534
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R+++K GW +G GLG +GI PL + ++ G+ A
Sbjct: 360 GQKGFAERLLSKYGWTKGSGLGASGEGIVKPLQVKLEKQKKKPASEGGGLATPAGRANIV 419
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELED--------EVGSECA-KYGTVTR 309
++KK + F G + V++L MV ++D ELE+ E+G ECA KYG V R
Sbjct: 420 GGNQKKSEDGKF-GRMSEVVVLHGMVDGMDLDAELENGEGGGLMQEIGDECAEKYGRVER 478
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + PV FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 479 VFIDRNSPGKIPV------FVKFTSQLSALRAVNALEGRIFNGNTIIARFFDVDKFEQ 530
>gi|225560485|gb|EEH08766.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 534
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R+++K GW +G GLG +GI PL + ++ G+ A
Sbjct: 360 GQKGFAERLLSKYGWTKGSGLGASGEGIVKPLQVKLEKQKKKPASEGGGLATPAGRANIV 419
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELED--------EVGSECA-KYGTVTR 309
++KK + F G + V++L MV ++D ELE+ E+G ECA KYG V R
Sbjct: 420 GGNQKKSEDGKF-GRMSEVVVLHGMVDGMDLDAELENGEGGGLMQEIGDECAEKYGRVER 478
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + PV FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 479 VFIDRNSPGKIPV------FVKFTSQLSALRAVNALEGRIFNGNTIIARFFDVDKFEQ 530
>gi|391869141|gb|EIT78346.1| G-patch DNA repair protein [Aspergillus oryzae 3.042]
Length = 345
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ AQR++ K GW +G GLG GI PL + K +R G A K
Sbjct: 171 GQKGFAQRLLEKYGWTKGSGLGATGTGIVNPLQVKVEKQKKRPDSEGGGFATPAGRGKII 230
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+ KK F G + V++L+ M+ +V+ ELE E+G EC+ KYG V R
Sbjct: 231 GGARKKEDEGKF-GQMSEVVILKGMLDGMDVEAELEGDQDGGLMQEIGDECSEKYGNVER 289
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + P PV FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 290 VFIARGSAPPVPV------FVKFTNQLSALRAVNALEGRIFNGNPITARFFDTQKFEQ 341
>gi|312086552|ref|XP_003145121.1| Poly(U)-binding-splicing factor half pint [Loa loa]
gi|393909311|gb|EJD75402.1| Poly(U)-binding-splicing factor half pint, variant [Loa loa]
Length = 765
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ V++LRNMV E DDELE E+ EC KYG V V+I + P + +V+IFV+F+
Sbjct: 673 STVIVLRNMVTIEECDDELEGEIRDECNKYGKVQEVVIAQ-----DPANGSVKIFVRFDN 727
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+++ A LD R+F GR + A YD+ F N+ +
Sbjct: 728 TQEADTARQALDKRYFAGREISAQNYDQILFDHNDYS 764
>gi|83769258|dbj|BAE59395.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 326
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ AQR++ K GW +G GLG GI PL + K +R G A K
Sbjct: 152 GQKGFAQRLLEKYGWTKGSGLGATGTGIVNPLQVKVEKQKKRPDSEGGGFATPAGRGKII 211
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+ KK F G + V++L+ M+ +V+ ELE E+G EC+ KYG V R
Sbjct: 212 GGARKKEDEGKF-GQMSEVVILKGMLDGMDVEAELEGDQDGGLMQEIGDECSEKYGNVER 270
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + P PV FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 271 VFIARGSAPPVPV------FVKFTNQLSALRAVNALEGRIFNGNPITARFFDTQKFEQ 322
>gi|325191168|emb|CCA25956.1| Poly(U)bindingsplicing factor PUF60 putative [Albugo laibachii
Nc14]
Length = 454
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
L L N++ PG+VD+ L EV SEC+KYG + +V+I E++ VRIFVQ+E
Sbjct: 364 CLCLLNLIKPGDVDENLRGEVASECSKYGDIAQVVIHELSSH-------VRIFVQYEDEA 416
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERF 365
+A L GR+FGG V+A FY + F
Sbjct: 417 GALRAKGALHGRYFGGNAVKAHFYPIQMF 445
>gi|393909310|gb|EFO18950.2| Poly(U)-binding-splicing factor half pint [Loa loa]
Length = 769
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
V++LRNMV E DDELE E+ EC KYG V V+I + P + +V+IFV+F+ ++
Sbjct: 679 VIVLRNMVTIEECDDELEGEIRDECNKYGKVQEVVIAQ-----DPANGSVKIFVRFDNTQ 733
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ A LD R+F GR + A YD+ F N+ +
Sbjct: 734 EADTARQALDKRYFAGREISAQNYDQILFDHNDYS 768
>gi|313228939|emb|CBY18091.1| unnamed protein product [Oikopleura dioica]
Length = 505
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEAVRIFV 330
P TRVL+LRNM+ E+D E+E EV EC YG VT+V+I+ E + + V+IFV
Sbjct: 404 APQTRVLVLRNMLKSDELDGEVEAEVTEECENYGKVTKVVIYQEKQSADENAEIIVKIFV 463
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
QF ++ A+ LD R+F G + A YD+ F
Sbjct: 464 QFSLPQEVQTAISALDKRWFNGNQISAQIYDQTAF 498
>gi|355715630|gb|AES05389.1| RNA binding motif protein 17 [Mustela putorius furo]
Length = 318
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 115/256 (44%), Gaps = 54/256 (21%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 73 PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 128
Query: 133 QEGEERERREREERENASASR-------LNMSGEEAWKRRAAMSSGGVPP---------- 175
+E EERE+R ++ E + SR + E ++R+ + PP
Sbjct: 129 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEL 188
Query: 176 ------------RSPS-----PPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRM 218
RS S PPPV E G S + +G T A ++
Sbjct: 189 PRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPGNSFLANMG------GTVAHKI 242
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGP 273
M K G++EGQGLG+ EQG++T L KT +R G I+ +A+E + KK S
Sbjct: 243 MQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTEILKC 302
Query: 274 PTRVLLLRNMVGPGEV 289
PT+V+LLRNMVG GEV
Sbjct: 303 PTKVVLLRNMVGAGEV 318
>gi|212528524|ref|XP_002144419.1| G-patch DNA repair protein (Drt111), putative [Talaromyces
marneffei ATCC 18224]
gi|210073817|gb|EEA27904.1| G-patch DNA repair protein (Drt111), putative [Talaromyces
marneffei ATCC 18224]
Length = 544
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 37/183 (20%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDR----------------RAGVI 253
GQ A+R+MAK GW +G GLG GI + L + + R +I
Sbjct: 370 GQKGFAERLMAKYGWTKGSGLGAAGTGIVSALQVKVEKQKKKPDSEGGGFATPAGRGRII 429
Query: 254 VNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELED--------EVGSEC-AKY 304
+ N+ E K GP + V++L M+ ++ EL++ E+G EC KY
Sbjct: 430 ASKKRNEEEGKF------GPMSEVIVLYGMLDGMDLATELDNSQGGGLMQEIGEECNEKY 483
Query: 305 GTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
G V +V I + +E V +FV+F +A+ L+GR F G + A FYD E+
Sbjct: 484 GRVEKVFIHRES------NEPVPVFVKFTAQLSALRAVNALEGRIFNGNKITARFYDTEK 537
Query: 365 FSK 367
F K
Sbjct: 538 FDK 540
>gi|358390285|gb|EHK39691.1| hypothetical protein TRIATDRAFT_82161 [Trichoderma atroviride IMI
206040]
Length = 525
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 25/174 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA----------SEN 259
GQ+ AQR+M+K GW +G LG E G+ PL + RR +
Sbjct: 351 GQVGFAQRLMSKYGWTKGSALGANESGLLNPLRVQVEKRRKKADADGGGWAEPGGKGKII 410
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVTRVLIF 313
++K ++ G + V++L+NM+ E+ D L E+G EC KYG V R+ I
Sbjct: 411 GGKRKDEAGGKFGTMSEVIVLQNMLENMPDLEAEIADGLGQEIGGECGEKYGRVERLYI- 469
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
++ E ++F++F +A+ +LDGR F G + FYD E F +
Sbjct: 470 DV--------ETRQVFIKFTDQVSALRAVNELDGRVFNGNNIMPKFYDTETFER 515
>gi|156086862|ref|XP_001610838.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798091|gb|EDO07270.1| conserved hypothetical protein [Babesia bovis]
Length = 265
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 69/280 (24%)
Query: 100 YDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASRLNMSGE 159
YDP PNDYE RE ++A R EL+ ++ EG + +S E
Sbjct: 40 YDPMYPNDYEHLSREFARRATAQTTRVELKIKKVEGPK------------------LSAE 81
Query: 160 EAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETS-GLGLGAGGQMTAAQRM 218
EA++RR + T ++TS G+G+ R+
Sbjct: 82 EAYERRMKLLDSA------------------DNTVTQDATDTSKGVGM----------RI 113
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV-------NASENKSEK-----KVK 266
M K+GW EG+GLG EQGI PL+A+ T + GVIV N + + S+ +V
Sbjct: 114 MQKLGWTEGKGLGANEQGIVAPLVAKNTGKHVGVIVQGAKLGANPAHSTSQSTVPRDRVT 173
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
+ TRVL L + D L++E+ ++YG++ V++ +
Sbjct: 174 ASAGGMAATRVLKLTFECTIDDT-DRLQEELEESLSQYGSLIEVVVHR--------SDTT 224
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
+ +FE Q +A+ ++D R ATF EE ++
Sbjct: 225 ISYCEFEDDSQALRAMNNVDKVLPQYRKT-ATFATEEEYN 263
>gi|443719882|gb|ELU09834.1| hypothetical protein CAPTEDRAFT_172934 [Capitella teleta]
Length = 635
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 276 RVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-EITEPNFPVDEAVRIFVQFER 334
RV++LRNMVGP ++D+ELE EV EC K+G V RV+I+ E + + V+IFV+F +
Sbjct: 538 RVMVLRNMVGPEDLDEELESEVTDECGKFGPVNRVIIYQEKQSEDEDAEVIVKIFVEFLQ 597
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
S + L+GR+FGGR+V A YD++ + N+L+
Sbjct: 598 SPAVDAGIKSLNGRYFGGRIVSAQKYDQDMYEANDLS 634
>gi|402587582|gb|EJW81517.1| hypothetical protein WUBG_07571 [Wuchereria bancrofti]
Length = 493
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
V++LRNMV E DDELE E+ EC KYG V V+I + P + +V+IFV+F+ +
Sbjct: 403 VIVLRNMVTIEECDDELEGEIRDECNKYGKVQEVVIAQ-----DPANGSVKIFVRFDNPQ 457
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ A LD R+F GR + A YD+ F N+ +
Sbjct: 458 EADTARQALDKRYFAGREISAQNYDQILFDHNDYS 492
>gi|164662263|ref|XP_001732253.1| hypothetical protein MGL_0028 [Malassezia globosa CBS 7966]
gi|159106156|gb|EDP45039.1| hypothetical protein MGL_0028 [Malassezia globosa CBS 7966]
Length = 357
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 215 AQRMMAKMGWKEGQGLGRQ-EQGITTPLMARKTDRRA-GVIVNASENKSEKKVKSVNFNG 272
A+R+MAK G+K+GQGLG + +GI PL A + G++VN + + S V F G
Sbjct: 202 AERIMAKYGYKKGQGLGPEGNKGIAAPLEATCIGGKGRGLVVNPNVDPSGDN-SYVQF-G 259
Query: 273 PPTRVLLLRNMVGPGEVD-DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE--AVRIF 329
P+ +++L P ++ +L +V EC +YG + ++I+ P D+ +R+F
Sbjct: 260 DPSEIVVLE-YFDPCQIKLSDLRQDVEEECNRYGFIQNIIIY-------PHDDNGLLRVF 311
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPL 373
VQF + +A+ LD RF GR +R +Y E + + L
Sbjct: 312 VQFTGAAGAYRAVRALDSRFVAGRSIRCRYYPAEAYFSGQFVAL 355
>gi|407928551|gb|EKG21406.1| hypothetical protein MPH_01265 [Macrophomina phaseolina MS6]
Length = 533
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 142/361 (39%), Gaps = 97/361 (26%)
Query: 100 YDPARPNDYEDYRREKKKKAVDAEIRRELERRRQ-EGEERERREREEREN---------- 148
YDP+RPNDY+ Y+ +++ ++ + L R R G ++R + EE +
Sbjct: 167 YDPSRPNDYQAYKGSEEQMREISDWKDHLYRHRALRGASKDRSDSEEEDYQRSRMKSQFA 226
Query: 149 -------ASASRLNM----------------SGEEAWKRRAAMS---------------- 169
A S LN SGE+A+ RR +S
Sbjct: 227 PPKNYNFAPPSNLNTPTPPAPSASAEVPDDPSGEDAYARRLRLSGLDAPPPPPPPPEEPD 286
Query: 170 -----------SGGVPPRSP----------SPPPVNVESGGGGGGFTIGKSETSGLGLGA 208
G R+P PP + T +SE G
Sbjct: 287 NTVPPPTEAAAPAGTISRAPVRYDVPAPTQDPPSDSYAENRALDSITTQESE-DGPRSKT 345
Query: 209 GGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGV-------------IVN 255
GQ AQR+M K GW++G+GLG E GI TPL A K ++R + +
Sbjct: 346 PGQKGFAQRIMEKYGWEKGKGLGANETGIITPL-AMKAEKRKKLPDAKGGGWAGPGGMGK 404
Query: 256 ASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELED-----EVGSECAKY-GTVTR 309
+ K K + +G + V+++ NM+ ++ EL+D E+G E K G + R
Sbjct: 405 ITGGKKAKGSEEEGKHGKMSAVVVMTNMLVGLDLQQELDDGSLMQEIGEELDKAGGRLER 464
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+ I + N V +F +F +A+ +DGR F G +RA ++D ++F K +
Sbjct: 465 IYIDRYSGSN-----DVPVFAKFTNELSALRAVNAMDGRVFNGNTIRARYFDVDKFEKGD 519
Query: 370 L 370
Sbjct: 520 Y 520
>gi|301101828|ref|XP_002900002.1| Poly(U)-binding-splicing factor PUF60, putative [Phytophthora
infestans T30-4]
gi|262102577|gb|EEY60629.1| Poly(U)-binding-splicing factor PUF60, putative [Phytophthora
infestans T30-4]
Length = 444
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
L L N+V GEVDDELEDEV EC K+G+V +V I E+ + VR+FV F+ +
Sbjct: 353 CLCLVNLVNCGEVDDELEDEVRGECGKFGSVNKVDIHELADH-------VRVFVLFDDAA 405
Query: 337 QTTKALIDLDGRFFGGRVVRATFY 360
KA L GRFFGG V+A +Y
Sbjct: 406 GAAKAKQALHGRFFGGNQVQAHYY 429
>gi|336268981|ref|XP_003349252.1| hypothetical protein SMAC_05536 [Sordaria macrospora k-hell]
gi|380089825|emb|CCC12358.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 535
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 35/181 (19%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRA---------------GVIV 254
GQ A R+M+K GW G GLG E GIT+ L + R+ G I+
Sbjct: 359 GQAGFAARLMSKYGWTAGSGLGASESGITSALQVKVEKRKKRSDAEGGGWAEPGGRGKII 418
Query: 255 NASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE---------DEVGSECA-KY 304
S+ + K G + V++L +M+ G D+EL +E+G+EC KY
Sbjct: 419 AGKSASSKPEEKDGGRFGKMSEVIVLDHMLD-GMSDEELRQEVEGGDLYEEIGTECGEKY 477
Query: 305 GTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
G V R+ + E R+F++F +A+ L+GR F G + FYD E+
Sbjct: 478 GRVMRLFVER---------EGRRVFIRFTDGVSALRAVNALEGRIFNGNAIVPRFYDLEK 528
Query: 365 F 365
F
Sbjct: 529 F 529
>gi|170581558|ref|XP_001895732.1| RNA binding protein [Brugia malayi]
gi|158597207|gb|EDP35417.1| RNA binding protein, putative [Brugia malayi]
Length = 275
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
V++L+NMV E DDELE E+ EC KYG V V+I + P + +V+IFV+F+ +
Sbjct: 185 VIVLKNMVTIEECDDELEGEIRDECNKYGKVQEVVIAQ-----DPANGSVKIFVRFDNPQ 239
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ A LD R+F GR + A YD+ F N+ +
Sbjct: 240 EADTARQALDKRYFAGREISAQNYDQILFDHNDYS 274
>gi|76162067|gb|AAX30164.2| SJCHGC01278 protein [Schistosoma japonicum]
Length = 73
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 278 LLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQ 337
+LLRNM GPGEVDD+LE E ECAKYG V +I+E+ P P DE VRIFV+F+ E
Sbjct: 1 ILLRNMCGPGEVDDDLEPETAEECAKYGKVVMCMIYEL--PEAPDDEVVRIFVEFDSEEA 58
Query: 338 TTKALI 343
TK +
Sbjct: 59 ATKGAL 64
>gi|67772135|gb|AAY79320.1| RNA-binding protein SiahBP [Siniperca chuatsi]
Length = 118
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITE-PNFPVDEAVRIFVQFE 333
+ V++LRNMVGP ++DD+LE EV EC K+G V RV+I++ + D V+IFV+F
Sbjct: 33 STVMVLRNMVGPEDIDDDLEGEVAEECGKFGCVNRVIIYQEKQGEEEDADIIVKIFVEFS 92
Query: 334 RSEQTTKALIDLDGRFFGGRVVRA 357
+ + KA+ L+ R+FGGR V A
Sbjct: 93 MASEMNKAIQALNDRWFGGRKVVA 116
>gi|195489053|ref|XP_002092574.1| GE11595 [Drosophila yakuba]
gi|194178675|gb|EDW92286.1| GE11595 [Drosophila yakuba]
Length = 437
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDD--ELED---EVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G PT +L L NMV P E+ D E ED ++ ECAKYG V + +I P FP
Sbjct: 334 GSPTEILCLLNMVLPEELLDNEEFEDIRSDIKQECAKYGDVRSI---KIPRPVGQFPKRG 390
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FVQFE E + KAL L GR F GR+V +FYD +++ +++L
Sbjct: 391 CGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSFYDPDKYLQDDL 436
>gi|387193280|gb|AFJ68695.1| splicing factor U2AF 65 kDa subunit [Nannochloropsis gaditana
CCMP526]
Length = 424
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 273 PPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV- 326
P T+VL+L NMV P E+ D E+ ++V E AK+G V ++I EP+ P AV
Sbjct: 320 PATKVLVLANMVTPDELKDDQEYQEIVEDVREEVAKFGEVLSLVIPRPEEPSAPPSPAVG 379
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+IFV++ S QT A L GR F GR+V+A+FYDEE+F + ELA
Sbjct: 380 KIFVEYAESSQTKAAAQSLQGRRFAGRIVQASFYDEEKFKRQELA 424
>gi|121706622|ref|XP_001271573.1| G-patch DNA repair protein (Drt111), putative [Aspergillus clavatus
NRRL 1]
gi|119399721|gb|EAW10147.1| G-patch DNA repair protein (Drt111), putative [Aspergillus clavatus
NRRL 1]
Length = 516
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 83/178 (46%), Gaps = 26/178 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ A+R++AK GW +G GLG GI PL + K +R G + A K
Sbjct: 340 GQKGFAERLLAKYGWTKGSGLGATGSGIVKPLQVKVEKQKKRPDSEGGGFVTPAGRGKII 399
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+ K + G + V++L+ M+ ++D ELE E+G EC+ KYG V R
Sbjct: 400 GGTRKTEEEEGKFGRMSEVIVLKGMLDGMDLDAELEGDQDGGLMQEIGEECSEKYGRVER 459
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + PV FV+F +A+ L+GR F G + FYD ++F +
Sbjct: 460 VFISRDSGHPVPV------FVKFTNQLSALRAVNALEGRVFNGNTITVRFYDTQKFEQ 511
>gi|268564468|ref|XP_002639117.1| C. briggsae CBR-RNP-6 protein [Caenorhabditis briggsae]
Length = 744
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ V++LRNMV P ++D+ LE+E+ EC KYG V V+I NF V+IFV++
Sbjct: 652 SNVIVLRNMVTPSDIDEYLEEEIREECGKYGNVIDVVI-----ANFAASGTVKIFVKYAD 706
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
S Q +A LDGRFFGG V+A YD+ F
Sbjct: 707 SMQVDRAKAALDGRFFGGNTVKAEAYDQILF 737
>gi|344240816|gb|EGV96919.1| Splicing factor 45 [Cricetulus griseus]
Length = 104
Score = 74.7 bits (182), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 9/98 (9%)
Query: 219 MAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKSEKKVKSVNFNGP--- 273
M K G++EGQGLG+ EQG+ T L KT +R G I+ +A E + + + + P
Sbjct: 1 MQKYGFQEGQGLGKHEQGLITALSVEKTSKRGGNIIVGDAKEKRESQDASKKSDSNPLTE 60
Query: 274 ----PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTV 307
P +V+LLRNMVG G+VD++LE E EC KYG V
Sbjct: 61 KLKCPPKVVLLRNMVGVGKVDEDLEVETKEECEKYGKV 98
>gi|330792877|ref|XP_003284513.1| hypothetical protein DICPUDRAFT_91335 [Dictyostelium purpureum]
gi|325085543|gb|EGC38948.1| hypothetical protein DICPUDRAFT_91335 [Dictyostelium purpureum]
Length = 346
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
V S F+ PT++LLL N+ EV LE+E+ EC K+G V V+I+ + + P E
Sbjct: 237 VNSEQFSKTPTKILLLLNIATKKEVVPSLEEEMMEECKKFGKVNSVVIYPVLSASVPSSE 296
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPL 373
VRIF+ F+ + A L+ R+F R V A +Y E F +N+L P
Sbjct: 297 EVRIFIYFDTPDSCKAAYTKLNNRYFAERRVSAYYYKEMLFFRNKLEPF 345
>gi|440793928|gb|ELR15099.1| hypothetical protein ACA1_215710 [Acanthamoeba castellanii str.
Neff]
Length = 98
Score = 74.7 bits (182), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 283 MVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA--VRIFVQFERSEQTTK 340
MVGPG++DD L+ EV +E AKYG V RV+I + E EA V++F+ F+ + +
Sbjct: 1 MVGPGDLDDYLKAEVETEAAKYGHVERVVIHQCRE---EAGEAVVVKVFILFQSAAEAQV 57
Query: 341 ALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
A L GR+F GR+++A FYDE+ F + A
Sbjct: 58 AQTALHGRWFAGRMIKAAFYDEQLFLAGDYA 88
>gi|429329604|gb|AFZ81363.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 494
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
P+ V++L NMV P VD+EL +EV EC+KYGTVT V + +F ++++ IFV F
Sbjct: 402 PSNVIVLCNMVDPKLVDEELPNEVKEECSKYGTVTSVYL------HFSQNDSISIFVVFN 455
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
E A+ L+ R+F GR + YD +
Sbjct: 456 THEDAENAVKALNSRWFNGRQIECRSYDSSAY 487
>gi|281202631|gb|EFA76833.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 410
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 267 SVNFNGP------PTRVLLLRNMVGP-GEVDDELEDEVGSECAKYGTVTRVLIFE--ITE 317
S+N NG T++LLL N+V E+DD+L +++ EC+KYG V V++ I E
Sbjct: 297 SINTNGKEKISQQATKILLLTNIVSTREEIDDDLIEDIEKECSKYGQVLNVVVGNEPIEE 356
Query: 318 PN-FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
D+ + I+VQFE +Q A L+ R+F R V+ FY+E F + L
Sbjct: 357 TGILAADDIIGIYVQFETIDQCNHAFTQLNDRYFAKRRVKTYFYNEHTFKQGNL 410
>gi|336472048|gb|EGO60208.1| hypothetical protein NEUTE1DRAFT_127136 [Neurospora tetrasperma
FGSC 2508]
Length = 593
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 42/186 (22%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------------------- 249
GQ A R+M+K GW G GLG E GITT L + R+
Sbjct: 359 GQAGFAARLMSKYGWTAGSGLGASESGITTALQVKVEKRKKRSDAEGGGWAEPGGRGKII 418
Query: 250 AGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE---------DEVGSE 300
AG S +K E++ F G + V++L +M+ G D+EL +E+G+E
Sbjct: 419 AGKPAAGSSSKGEEQ-DGGKF-GKMSEVIVLDHMLD-GMSDEELRQEVEGGDLYEEIGTE 475
Query: 301 CA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
C KYG V R+ + E R+F++F +A+ L+GR F G + F
Sbjct: 476 CGEKYGRVMRLFV---------ETEGRRVFIRFTDGVSALRAVNALEGRIFNGNAIVPRF 526
Query: 360 YDEERF 365
YD E+F
Sbjct: 527 YDLEKF 532
>gi|224011335|ref|XP_002295442.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583473|gb|ACI64159.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 512
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 113/269 (42%), Gaps = 50/269 (18%)
Query: 92 VTSTVIEEYDPARPNDYEDYRREKKKKAVDAEIRRE-LERRRQEGEERERREREERENAS 150
+ ++V YDP PNDY YR KK + V +++R LER Q+ + R++ E E R
Sbjct: 285 LHASVTHPYDPHCPNDYLAYREHKKTEQVRKDMQRSALERLDQQEKLRKKIEEERR---- 340
Query: 151 ASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLGLGAGG 210
+++ SG+ + SGGV G G + +E G
Sbjct: 341 --KIDESGDLDRMVESRFGSGGVV--------------GEGAAHSSATAEGGRGRGRGRG 384
Query: 211 QMTAAQRMMAK-MGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVN 269
++ K +E +G +GIT L + K+ K+
Sbjct: 385 VSNLPAWLLKKQQAEREARG-----EGITQSL------------------GTSKEPKNTQ 421
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
P + + L NMV PG++DDEL EV EC + G V V + + T +E VR+
Sbjct: 422 QPSPDSCTVALFNMVAPGDIDDELATEVKEECEEQCGKVLNVHVMDATSS----EEYVRV 477
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
V FE + +KA+ GR FG R + A
Sbjct: 478 DVTFENAASASKAVKIFSGRMFGDRKITA 506
>gi|340915000|gb|EGS18341.1| putative mRNA splicing factor [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1485
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 35/177 (19%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAG-----------VIV--- 254
AQ++M K GWK G GLG GIT+ L RK D G +I
Sbjct: 1311 AQKLMEKYGWKRGTGLGANNSGITSALRVQIEKRKRKPDAEGGGWADPKGGRGRIIAPKS 1370
Query: 255 NASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVT 308
+S K E + + G + V++L+NM+ E++ L E+G EC +YG V
Sbjct: 1371 YSSTAKQEGEGQGEGKFGKTSCVVVLKNMLDNMEDLEAEIEAGLGQEIGEECGERYGRVE 1430
Query: 309 RVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
RV + I R+F++F + +A+ L+GR F G + A FYDEE+F
Sbjct: 1431 RVCVDVIGR---------RVFIKFVEAVSALRAVNALEGRVFNGNSIVARFYDEEKF 1478
>gi|350294747|gb|EGZ75832.1| hypothetical protein NEUTE2DRAFT_84729 [Neurospora tetrasperma FGSC
2509]
Length = 538
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 42/186 (22%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------------------- 249
GQ A R+M+K GW G GLG E GITT L + R+
Sbjct: 359 GQAGFAARLMSKYGWTAGSGLGASESGITTALQVKVEKRKKRSDAEGGGWAEPGGRGKII 418
Query: 250 AGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE---------DEVGSE 300
AG S +K E++ F G + V++L +M+ G D+EL +E+G+E
Sbjct: 419 AGKPAAGSSSKGEEQ-DGGKF-GKMSEVIVLDHMLD-GMSDEELRQEVEGGDLYEEIGTE 475
Query: 301 CA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
C KYG V R+ + E R+F++F +A+ L+GR F G + F
Sbjct: 476 CGEKYGRVMRLFV---------ETEGRRVFIRFTDGVSALRAVNALEGRIFNGNAIVPRF 526
Query: 360 YDEERF 365
YD E+F
Sbjct: 527 YDLEKF 532
>gi|261192665|ref|XP_002622739.1| G-patch DNA repair protein [Ajellomyces dermatitidis SLH14081]
gi|239589221|gb|EEQ71864.1| G-patch DNA repair protein [Ajellomyces dermatitidis SLH14081]
Length = 536
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R++ K GW +G GLG +GI PL + ++ G A K
Sbjct: 362 GQKGFAERLLTKYGWTKGTGLGASREGIVKPLQVKIEKQKKKPDSEGGGFATPAGRAKII 421
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
++KK + F G + V++L MV ++D ELE E+G ECA KYG V R
Sbjct: 422 GGNQKKSEDGKF-GRMSEVVVLHGMVDGMDLDAELEGGEGGGLMQEIGDECAEKYGRVER 480
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + PV FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 481 VFIDRNSTGKIPV------FVKFTSQLSALRAVNALEGRIFNGNTITARFFDVDKFEQ 532
>gi|239610241|gb|EEQ87228.1| G-patch DNA repair protein [Ajellomyces dermatitidis ER-3]
gi|327357831|gb|EGE86688.1| G-patch DNA repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 536
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R++ K GW +G GLG +GI PL + ++ G A K
Sbjct: 362 GQKGFAERLLTKYGWTKGTGLGASREGIVKPLQVKIEKQKKKPDSEGGGFATPAGRAKII 421
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVD--------DELEDEVGSECA-KYGTVTR 309
++KK + F G + V++L MV ++D L E+G ECA KYG V R
Sbjct: 422 GGNQKKSEDGKF-GRMSEVVVLHGMVDGMDLDVELEGGEGGGLMQEIGDECAEKYGRVER 480
Query: 310 VLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
V I + PV FV+F +A+ L+GR F G + A F+D ++F +
Sbjct: 481 VFIDRNSTGKIPV------FVKFTSQLSALRAVNALEGRIFNGNTITARFFDVDKFEQ 532
>gi|313244755|emb|CBY15469.1| unnamed protein product [Oikopleura dioica]
Length = 2588
Score = 72.8 bits (177), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFP-VDEAVRIFVQFE 333
+ V++L+NM+ ++D+E+E EV EC++YG V RV+I++ + P + V++FVQF
Sbjct: 2490 SNVVVLKNMLSADDLDEEVESEVTQECSQYGNVLRVVIYQEVDRLAPGCEPIVKVFVQFT 2549
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++ A +L GRFF GR + A YDE F
Sbjct: 2550 DADGAETAKKELSGRFFAGRKINAQSYDETAF 2581
>gi|324503561|gb|ADY41546.1| Poly(U)-binding-splicing factor half pint [Ascaris suum]
Length = 832
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ V++L+NMV E DDELE E+ EC KYG V V+I + P + +V+IFV+F
Sbjct: 740 STVIVLKNMVTIEECDDELEGEIRDECTKYGQVEEVVIAQ-----DPTNGSVKIFVRFGD 794
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
++ A LD R+F G+ + A YD+ F N+
Sbjct: 795 IQEAEVARQALDKRYFAGKEISAQSYDQILFDHND 829
>gi|295659618|ref|XP_002790367.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281819|gb|EEH37385.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 535
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAGVIVN----ASEN 259
GQ A+R++ K GW +G GLG +GI PL +K D G A
Sbjct: 361 GQKGFAERLLTKYGWTKGSGLGASGEGIVKPLQVKLEKQKKKPDSEGGGFATPAGRAKII 420
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTRV 310
++K G + V++L MV ++D ELE E+G ECA KYG V RV
Sbjct: 421 GGKQKASDDGKFGRMSEVVVLHGMVDGMDLDAELEGGEGGGLMQEIGDECAEKYGRVERV 480
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
I PV FV+F +A+ L+GR F G + A F+D ERF +
Sbjct: 481 FIDRNATGTIPV------FVKFTSQLSALRAVNALEGRIFNGNTITARFFDVERFEQ 531
>gi|171694389|ref|XP_001912119.1| hypothetical protein [Podospora anserina S mat+]
gi|170947143|emb|CAP73948.1| unnamed protein product [Podospora anserina S mat+]
Length = 455
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAG----------------V 252
A ++M+K GW G GLG GIT+ L +K+D G
Sbjct: 274 ATKLMSKYGWTAGTGLGASSSGITSALSVQPLKRKKKSDAEGGGFRDPAAAQGRIIAPKS 333
Query: 253 IVNASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGT 306
+ S+ + + + N +RV++LR+M+ EV+ L E+G EC KYG
Sbjct: 334 LSTPSQPQQDNNNNNNNAGQKISRVVVLRDMLLNIPNLAAEVEAGLGQEIGEECGEKYGR 393
Query: 307 VTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V R+ I + + E R+++QF +A+ L+GR F G +RA FYD E+F
Sbjct: 394 VERLFIDQSER----LGENKRVYIQFVEEVSALRAVNALEGRIFNGNTIRAGFYDAEKF 448
>gi|226292997|gb|EEH48417.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 535
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R++ K GW +G GLG +GI PL + ++ G A K
Sbjct: 361 GQKGFAERLLTKYGWTKGSGLGASGEGIVKPLQVKLEKQKKKPDSEGGGFATPAGRAKII 420
Query: 261 -SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTRV 310
++K G + V++L MV ++D ELE E+G ECA KYG V RV
Sbjct: 421 GGKQKASDDGKFGRMSEVVVLHGMVDGMDLDAELEGGEGGGLMQEIGDECAEKYGRVERV 480
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
I PV FV+F +A+ L+GR F G + A F+D ERF +
Sbjct: 481 FIDRNATGTIPV------FVKFTSQLSALRAVNALEGRIFNGNTITARFFDVERFEQ 531
>gi|308505212|ref|XP_003114789.1| CRE-RNP-6 protein [Caenorhabditis remanei]
gi|308258971|gb|EFP02924.1| CRE-RNP-6 protein [Caenorhabditis remanei]
Length = 817
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ V++LRNMV P ++D+ LE+E+ EC KYG+V V+I NF V+IFV++
Sbjct: 725 SSVIVLRNMVTPDDIDEYLEEEIREECGKYGSVQDVVI-----ANFASSGLVKIFVKYAD 779
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
S Q +A LDGRFFGG V+A YD+ F
Sbjct: 780 SLQVDRAKAALDGRFFGGNTVKAEAYDQILF 810
>gi|225683644|gb|EEH21928.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 626
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 25/175 (14%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R++ K GW +G GLG +GI PL + ++ G A K
Sbjct: 361 GQKGFAERLLTKYGWTKGSGLGASGEGIVKPLQVKLEKQKKKPDSEGGGFATPAGRAKII 420
Query: 261 -SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTRV 310
++K G + V++L MV ++D ELE E+G ECA KYG V RV
Sbjct: 421 GGKQKASDDGKFGRMSEVVVLHGMVDGMDLDAELEGGEGGGLMQEIGDECAEKYGRVERV 480
Query: 311 LIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
I PV FV+F +A+ L+GR F G + A F+D ER+
Sbjct: 481 FIDRNATGTIPV------FVKFTSQLSALRAVNALEGRIFNGNTITARFFDVERY 529
>gi|85099552|ref|XP_960809.1| hypothetical protein NCU08942 [Neurospora crassa OR74A]
gi|28922334|gb|EAA31573.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 548
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVN 269
GQ A R+M+K GW G GLG E GITT L K ++R +E +
Sbjct: 359 GQAGFAARLMSKYGWTAGSGLGASESGITTALQV-KVEKRKKRSDAEGGGWAEPGGRGKI 417
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECA-KYGTVTRVLIFEITEPNFPVD 323
G P + GE+ E+E +E+G+EC KYG V R+ +
Sbjct: 418 IAGKPAAGSSSKGEEQDGELRQEVEGGDLYEEIGTECGEKYGRVMRLFV---------ET 468
Query: 324 EAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
E R+F++F +A+ L+GR F G + FYD E+F
Sbjct: 469 EGRRVFIRFTDGVSALRAVNALEGRIFNGNAIVPRFYDLEKF 510
>gi|28950144|emb|CAD71002.1| related to DNA-damage repair protein DRT111 precursor [Neurospora
crassa]
Length = 516
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVN 269
GQ A R+M+K GW G GLG E GITT L K ++R +E +
Sbjct: 359 GQAGFAARLMSKYGWTAGSGLGASESGITTALQV-KVEKRKKRSDAEGGGWAEPGGRGKI 417
Query: 270 FNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECA-KYGTVTRVLIFEITEPNFPVD 323
G P + GE+ E+E +E+G+EC KYG V R+ +
Sbjct: 418 IAGKPAAGSSSKGEEQDGELRQEVEGGDLYEEIGTECGEKYGRVMRLFV---------ET 468
Query: 324 EAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
E R+F++F +A+ L+GR F G + FYD E+F
Sbjct: 469 EGRRVFIRFTDGVSALRAVNALEGRIFNGNAIVPRFYDLEKF 510
>gi|440637758|gb|ELR07677.1| hypothetical protein GMDG_02699 [Geomyces destructans 20631-21]
Length = 481
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 72/169 (42%), Gaps = 26/169 (15%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAGVIVNASE----N 259
GQ AQR+M+K GW +G GLG E GI L +K D G V+
Sbjct: 320 GQAGFAQRLMSKYGWSKGSGLGADESGIVNALHVQVQKRKKKPDSEGGGFVDPQAIGKIV 379
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECA-KYGTVTRVLIFEITEP 318
++K + G R + G D + E+G EC KYG V RV I
Sbjct: 380 GGKRKAAAGEEGGGSARYSEVE-----GAGDGGIMQEIGEECGEKYGNVERVFIHR---- 430
Query: 319 NFPVDEAVR--IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
E R +FV+F +A+ L+GR F G + A FYD E+F
Sbjct: 431 ----REGWRGTVFVKFTSQLSGLRAVNALEGRMFNGNTISARFYDPEKF 475
>gi|403221213|dbj|BAM39346.1| uncharacterized protein TOT_010000805 [Theileria orientalis strain
Shintoku]
Length = 356
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 27/158 (17%)
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA---SENKSEKKVKSVNF 270
A +MM KMGWKEG GLG+ EQG+ TPL+A++T + + +IVNA S K S F
Sbjct: 181 VAMKMMEKMGWKEGLGLGKNEQGMVTPLVAKQTGKNSAIIVNALPKSRGVYTPKTASEPF 240
Query: 271 NGPP------TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF----------- 313
P +R+ + M+ P + + ++ DE+ ++YG++ + +
Sbjct: 241 AAQPQPEGVKSRISV---MIFPSKAELDI-DELEEIISEYGSLVNIKVLSEDEHKVVESQ 296
Query: 314 -EITE--PNFPVDEAVRIFVQFERSEQTTKALIDLDGR 348
E +E +P++ + ++E EQ+ + ++ L+G+
Sbjct: 297 PECSELADKYPMESNKFVICEYETEEQSERLIVALNGK 334
>gi|402082595|gb|EJT77613.1| hypothetical protein GGTG_02719 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 557
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 85/194 (43%), Gaps = 38/194 (19%)
Query: 201 TSGLGLGAGGQMTA-------AQRMMAKMGWKEGQGLGRQ-EQGITTPLMARKTDRR--- 249
T+GLG G Q ++ A RMM KMGW++G+GLG + +GIT L + RR
Sbjct: 367 TAGLGAGDQQQRSSRPGKSGFAARMMEKMGWEKGRGLGAEGNEGITKGLSVKLEKRRRLP 426
Query: 250 ----------AGV--IVNASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDE 292
GV IV G + V++LR M+ EV+
Sbjct: 427 DAEGGGFAQPGGVARIVGGKPAPGGSGAGQEGRFGRMSEVVVLRGMLEGMHDVAAEVEKG 486
Query: 293 LEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFG 351
L E+G EC KYG + RV I T+ ++F++F +A+ L GR F
Sbjct: 487 LSQEIGEECGEKYGRLERVYIHVETK---------QVFIKFTDQVSALRAVNALQGRVFN 537
Query: 352 GRVVRATFYDEERF 365
G + FYD E+F
Sbjct: 538 GNAIVPAFYDAEKF 551
>gi|325191172|emb|CCA25959.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 553
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+RVL+LRNMV P E++DE E D++ SEC +YG VT +++ E DEA+
Sbjct: 450 GSPSRVLVLRNMVTPEELEDEDEYRDIMDDIRSECERYGRVTTIILPRAKEGYG--DEAL 507
Query: 327 -RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+++++F + A +L GR F RVV A + +E +F + EL
Sbjct: 508 GKVYIEFGDISTSQAAANELHGRGFANRVVSAQYMEEAQFERREL 552
>gi|195124159|ref|XP_002006561.1| GI21125 [Drosophila mojavensis]
gi|193911629|gb|EDW10496.1| GI21125 [Drosophila mojavensis]
Length = 427
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 16/109 (14%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G T VL L NMV P E+ DDE +D ++ ECAKYG V + I P P D+++
Sbjct: 324 GKATEVLCLLNMVLPSELTDDDEYDDIRTDIKQECAKYGKVKSLKI-----PR-PGDDSI 377
Query: 327 -----RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+FE + KAL L GR F GR+V +FYD E++ + +
Sbjct: 378 QGGCGKVFVRFESIDDCKKALNALSGRKFSGRIVMTSFYDLEKYKRKDF 426
>gi|194884971|ref|XP_001976363.1| GG20057 [Drosophila erecta]
gi|190659550|gb|EDV56763.1| GG20057 [Drosophila erecta]
Length = 440
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDD--ELED---EVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G PT ++ L NMV P E+ D E ED ++ ECAKYG V + +I P P
Sbjct: 337 GSPTEIICLLNMVLPEELLDNEEFEDIRTDIEQECAKYGEVRSI---KIPRPIGQAPKRG 393
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FVQFE E + +AL L GR F GR+V +FYD E++ ++L
Sbjct: 394 CGKVFVQFESVEDSQRALKALSGRKFSGRIVMTSFYDPEKYLLDDL 439
>gi|281209343|gb|EFA83511.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 1109
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 276 RVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERS 335
R L+LRN+ P E+DD E+E+ +EC +G V + ++ D +V+ F+ F+
Sbjct: 1013 RCLVLRNLGSPKEIDDFFEEEIKAECMSFGQVEKFVLTH--------DASVKAFILFKEP 1064
Query: 336 EQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
+GR+F G +V+A +YD F+K
Sbjct: 1065 AACATCFNKQNGRYFSGYIVKAEYYDISLFNK 1096
>gi|195380577|ref|XP_002049047.1| GJ20975 [Drosophila virilis]
gi|194143844|gb|EDW60240.1| GJ20975 [Drosophila virilis]
Length = 428
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFE-ITEPNFPVDEAVRI 328
T VL L NMV P E+ +DE ED ++ ECAKYG V + I I +P P ++
Sbjct: 328 TEVLCLLNMVLPSELLDNDEYEDIRTDIKQECAKYGKVKSLKIPRPIGDP--PQTGCGKV 385
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
FV+FE E KAL L GR F GR+V +FYD +++ + +
Sbjct: 386 FVRFESIEDCKKALNALSGRKFSGRIVMTSFYDLDKYKRKDF 427
>gi|400593933|gb|EJP61823.1| G-patch domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 498
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS-----ENKSEKK 264
GQ A R+MAK GW G+GLG GI PL + RR + NK +
Sbjct: 313 GQAGFAHRLMAKYGWTSGRGLGAAASGIVNPLRVQVEKRRKKADADGGGWAEPANKGKII 372
Query: 265 VKSVNFNGPP----TRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVTRVLI-- 312
N + V++L NM+ EV+D L E+G EC KYG V RV I
Sbjct: 373 GGRGGGNDDQQQGLSNVIVLLNMLDNMPDLAAEVEDGLGQEIGEECGEKYGRVERVYIDT 432
Query: 313 ------FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
+ T+ + +V + +A+ +L GR F G + +Y+++ F
Sbjct: 433 ETQRVFIKFTDQISALKASVPSLAYIISNSNMVQAVSELQGRVFNGNTITPKYYNDDAFD 492
Query: 367 K 367
+
Sbjct: 493 R 493
>gi|299470773|emb|CBN79819.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 636
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Query: 273 PPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV- 326
PPTRVL++ NMV E+ D ++ D++ EC+ +GTV +++ E + AV
Sbjct: 534 PPTRVLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGEAD--ASRAVG 591
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+++ + KA + L GR FG +V+ + +EE+F++ E
Sbjct: 592 KVFVEYDTKDSAQKAALSLAGRQFGANIVKVEYLNEEKFARREF 635
>gi|392577577|gb|EIW70706.1| hypothetical protein TREMEDRAFT_68179 [Tremella mesenterica DSM
1558]
Length = 628
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 90/200 (45%), Gaps = 49/200 (24%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARK--------------------------- 245
T A+R M ++G KEGQGLG GI L A
Sbjct: 429 TWAERHMRRLGHKEGQGLGASSTGIVHALAAEHVVAPPKPADPNQPLSKRAVARQKAAAA 488
Query: 246 -------------TDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDE 292
T+R G IVNA+E++ ++ K G +RV++L +V E DE
Sbjct: 489 NEKNANRRWVQHGTNR--GRIVNANEDERQRVEK--ERLGEASRVIVLTGIVDNEEEVDE 544
Query: 293 LEDEVGSE-CAKYGTVTRVLIFEITEPNFPVD--EAVRIFVQFERSEQTTKALIDLDGRF 349
E E C+ YG V RV + + EP P D E +RIF+ + +A +LDGRF
Sbjct: 545 ELSEEIGEECSNYGIVERV-VLHMAEP-VPEDPSECLRIFIVYSGMAGAWRATRELDGRF 602
Query: 350 FGGRVVRATFYDEERFSKNE 369
FGG+ +R ++DE RF + E
Sbjct: 603 FGGKKLRVRYFDEGRFDRGE 622
>gi|336465212|gb|EGO53452.1| hypothetical protein NEUTE1DRAFT_92746 [Neurospora tetrasperma FGSC
2508]
Length = 584
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
+ + +G +RV+ L NMV E+ D E+ D+V EC K+GT+ + I T +
Sbjct: 476 TTSLDGDVSRVVQLLNMVTADELMDNDDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQ 535
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+IF+++E S+Q TKAL L GR F R V AT++ EE F N
Sbjct: 536 SAGVGKIFIKYENSDQATKALKALAGRKFADRTVVATYFPEENFDVN 582
>gi|432095092|gb|ELK26479.1| Splicing factor 45 [Myotis davidii]
Length = 96
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 237 ITTPLMARKTDRRAGVIV--NASENKSEKKVKS---VNFNGPPTRVLLLRNMVGPGEVDD 291
++T L KT +R G I+ +E + +K S PT+V+LLRNMVG GEVD+
Sbjct: 4 LSTALSVEKTSKRGGKIIVGEVTEKDATRKSGSNPLTEILKRPTKVVLLRNMVGAGEVDE 63
Query: 292 ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
+LE E EC K G V + +IFEI P P DEAV
Sbjct: 64 DLEVETKEECEKCGKVGKCVIFEI--PGVPDDEAV 96
>gi|350295506|gb|EGZ76483.1| hypothetical protein NEUTE2DRAFT_76972 [Neurospora tetrasperma FGSC
2509]
Length = 592
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
+ + +G +RV+ L NMV E+ D E+ D+V EC K+GT+ + I T +
Sbjct: 484 TTSLDGDVSRVVQLLNMVTADELMDNDDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQ 543
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+IF+++E S+Q TKAL L GR F R V AT++ EE F N
Sbjct: 544 SAGVGKIFIKYENSDQATKALKALAGRKFADRTVVATYFPEENFDVN 590
>gi|449301190|gb|EMC97201.1| hypothetical protein BAUCODRAFT_23561 [Baudoinia compniacensis UAMH
10762]
Length = 631
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQ-EQGITTPLMARKTDRR---------------AGVI 253
GQ A+R + K+GW++G+GLG + +GI T + A+ R+ G I
Sbjct: 449 GQKGFAERYLKKLGWEKGKGLGVEGNEGIATAIFAKAEKRKKRSDADGGGWAQPANMGKI 508
Query: 254 VNASENKSEKKVKSVNFNGPP----TRVLLLRNMVGPGEVDDELED-----EVGSEC-AK 303
V K E + + G + V+ L M+ +VDDE+++ E+G E +
Sbjct: 509 VGGKRRKVEDEDAGDDSAGQEYDSMSEVIKLEGMLAGLDVDDEIQNKDLYGEIGREMEGQ 568
Query: 304 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
YG V RV I+ +FV+F +A+ DG F G V++A F+ E
Sbjct: 569 YGKVERVFIWRKV-----AGGQDDVFVKFTSPLSALRAVRACDGDEFAGNVMKARFFGME 623
Query: 364 RFSKNELA 371
+F K E A
Sbjct: 624 QFEKGEYA 631
>gi|85111663|ref|XP_964044.1| hypothetical protein NCU03039 [Neurospora crassa OR74A]
gi|28925805|gb|EAA34808.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 584
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
+ + +G +RV+ L NMV E+ D E+ D+V EC K+GT+ + I T +
Sbjct: 476 TTSLDGDVSRVVQLLNMVTADELMDNDDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQ 535
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+IF+++E S+Q TKAL L GR F R V AT++ EE F N
Sbjct: 536 SAGVGKIFIKYENSDQATKALKALAGRKFADRTVVATYFPEENFDVN 582
>gi|242019185|ref|XP_002430045.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
gi|212515110|gb|EEB17307.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
Length = 445
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPN 319
+ SV +GPPT VL L NMV P E++DE E +++ EC K+G V + EI P
Sbjct: 336 LTSVGMSGPPTEVLCLLNMVTPSELNDEEEYEDILEDIKEECNKHGVVKSL---EIPRPI 392
Query: 320 FPVDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VD ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 393 LGVDVPGCGKVFVEFNSVLDCQKAQQALTGRKFNHRVVVTSYFDPDKYHRREF 445
>gi|336274240|ref|XP_003351874.1| hypothetical protein SMAC_00421 [Sordaria macrospora k-hell]
gi|380096157|emb|CCC06204.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 594
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
+ + +G +RV+ L NMV E+ D E+ D+V EC K+GT+ + I T +
Sbjct: 486 TTSLDGDVSRVVQLLNMVTADELMDNDDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQ 545
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+I++++E S+Q TKAL L GR F R V AT++ EE F N
Sbjct: 546 SAGVGKIYIKYENSDQATKALKSLAGRKFADRTVVATYFPEENFDVN 592
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 14/102 (13%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAV-- 326
PTR+L LRNMV P E+ D+E ED +V E +KYG VT V +I P+ DEA
Sbjct: 420 PTRILELRNMVEPEELVDDEEYEDIIEDVREESSKYGEVTEV---KIPRPS-KTDEANPP 475
Query: 327 ---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++FV F+ KA L GR FGG+ V A +YDEER+
Sbjct: 476 GLGKVFVSFKTVSDAEKAFAALTGRRFGGKSVIANYYDEERY 517
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 17/130 (13%)
Query: 246 TDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV--DDELED---EVGSE 300
T RRA + + S + +V + PTR+L LRNMV P E+ D+E ED +V E
Sbjct: 411 TVRRASQVSSGSVELGQSFSPTVRY---PTRILELRNMVEPEELVDDEEYEDIIEDVREE 467
Query: 301 CAKYGTVTRVLIFEITEPNFPVDEAV-----RIFVQFERSEQTTKALIDLDGRFFGGRVV 355
+KYG VT V +I P+ DEA ++FV F+ KA L GR FGG+ V
Sbjct: 468 SSKYGEVTEV---KIPRPS-KTDEANPPGLGKVFVSFKTVSDAEKAFAALTGRRFGGKSV 523
Query: 356 RATFYDEERF 365
A +YDEER+
Sbjct: 524 IANYYDEERY 533
>gi|317029342|ref|XP_001391373.2| splicing factor u2af large subunit [Aspergillus niger CBS 513.88]
Length = 561
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV P E+ DE+ D+V EC+KYGTV + + T + +IF
Sbjct: 461 SRVLQLLNMVTPEELMDPEDYDEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGKIF 520
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+F+ E TT AL L GR F R V T++ EE F N
Sbjct: 521 VKFDTVESTTNALKALAGRKFSDRTVVTTYFSEENFDVN 559
>gi|358369529|dbj|GAA86143.1| splicing factor u2af large subunit [Aspergillus kawachii IFO 4308]
Length = 571
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV P E+ D E+ D+V EC+KYGTV + + T + +IF
Sbjct: 471 SRVLQLLNMVTPEELMDPEDYEEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGKIF 530
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+F+ E TT AL L GR F R V T++ EE F N
Sbjct: 531 VKFDTVESTTNALKALAGRKFSDRTVVTTYFSEENFDVN 569
>gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster]
Length = 449
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G PT L L NMV P E+ D+ + ++ ECAK+G V + +I P FP
Sbjct: 346 GSPTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSI---KIPRPIGQFPKRG 402
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FVQFE E + KAL L GR F GR+V ++YD E++ ++L
Sbjct: 403 CGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSYYDPEKYLADDL 448
>gi|24659166|ref|NP_611769.2| large subunit 2 [Drosophila melanogaster]
gi|7291545|gb|AAF46969.1| large subunit 2 [Drosophila melanogaster]
gi|201066057|gb|ACH92438.1| FI08027p [Drosophila melanogaster]
Length = 449
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G PT L L NMV P E+ D+ + ++ ECAK+G V + +I P FP
Sbjct: 346 GSPTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSI---KIPRPIGQFPKRG 402
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FVQFE E + KAL L GR F GR+V ++YD E++ ++L
Sbjct: 403 CGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSYYDPEKYLADDL 448
>gi|289741197|gb|ADD19346.1| splicing factor U2AF large subunit [Glossina morsitans morsitans]
Length = 423
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPV 322
V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P V
Sbjct: 317 VGISGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGVVRSV---EIPRPIEGV 373
Query: 323 DE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
D ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 374 DVPGCGKVFVEFNSVMDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 423
>gi|440789699|gb|ELR11001.1| hypothetical protein ACA1_354490 [Acanthamoeba castellanii str.
Neff]
Length = 88
Score = 64.3 bits (155), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 11/83 (13%)
Query: 283 MVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKAL 342
MVGPG++DD L+ EV +E AKYG V RV+I + E EAV + Q ++
Sbjct: 1 MVGPGDLDDYLKAEVETEAAKYGHVERVVIHQCRE---EAGEAVVVKAQVAQTS------ 51
Query: 343 IDLDGRFFGGRVVRATFYDEERF 365
GR+F GR+++A FYDE+ F
Sbjct: 52 --FHGRWFAGRMIKAAFYDEQLF 72
>gi|384500209|gb|EIE90700.1| hypothetical protein RO3G_15411 [Rhizopus delemar RA 99-880]
Length = 490
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 14/100 (14%)
Query: 275 TRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
TRVL L NMV P E++D+ E +++ ECAK+G V L +I +P D+ V
Sbjct: 391 TRVLQLMNMVTPEELEDDEEYQDIWEDIAEECAKFGNV---LDMKIPKPQ--KDQEVPGC 445
Query: 327 -RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
IFV+FE +QT AL L GR F R V ATF DE+ +
Sbjct: 446 GLIFVRFETKDQTLDALRALAGRKFADRTVVATFIDEQNY 485
>gi|195429288|ref|XP_002062695.1| GK19586 [Drosophila willistoni]
gi|194158780|gb|EDW73681.1| GK19586 [Drosophila willistoni]
Length = 466
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFP 321
SV G T +L L NMV P ++ D+E ED ++ EC K+G V + I P
Sbjct: 358 SVFSTGAATEILCLLNMVQPEDLLDDEEYEDICVDIKQECDKHGKVKGLKIPRPLVGKTP 417
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+FE E KAL L GR F GR+V +F++ +++ KNE
Sbjct: 418 RAGCGKVFVRFESMEDCQKALNALSGRKFNGRIVVTSFFNLDKYEKNEF 466
>gi|348510221|ref|XP_003442644.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 467
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 271 NGPPTRVLLLRNMVGPGE-VDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPV 322
+G PT VL L NMV P E VDDE LED + EC KYGTV + EI P V
Sbjct: 364 SGMPTEVLCLLNMVMPEELVDDEDYEEILED-IREECCKYGTVRSI---EIPRPVDGVEV 419
Query: 323 DEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV++ + KA+ L GR F RVV +YD + + ++E
Sbjct: 420 PGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF 467
>gi|410903107|ref|XP_003965035.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 461
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 271 NGPPTRVLLLRNMVGPGE-VDD----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
+G PT VL L NMV P E VDD E+ ++V EC KYG+V + EI P VD
Sbjct: 358 SGMPTEVLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSI---EIPRPVDGVDVP 414
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV++ + KA+ L GR F RVV +YD + + ++E
Sbjct: 415 GCGKIFVEYVSASDCQKAMQALTGRKFANRVVVTKYYDLDLYHRHEF 461
>gi|348510219|ref|XP_003442643.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 466
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 271 NGPPTRVLLLRNMVGPGE-VDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPV 322
+G PT VL L NMV P E VDDE LED + EC KYGTV + EI P V
Sbjct: 363 SGMPTEVLCLLNMVMPEELVDDEDYEEILED-IREECCKYGTVRSI---EIPRPVDGVEV 418
Query: 323 DEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV++ + KA+ L GR F RVV +YD + + ++E
Sbjct: 419 PGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF 466
>gi|259480265|tpe|CBF71237.1| TPA: splicing factor u2af large subunit (AFU_orthologue;
AFUA_7G05310) [Aspergillus nidulans FGSC A4]
Length = 547
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---V 326
+RVL L NMV P E+ D E+ D+V EC+K+G RVL +I P ++
Sbjct: 447 SRVLQLLNMVTPEELMDNEDYEEICDDVRDECSKFG---RVLELKIPRPTGGSRQSPGVG 503
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+IFV+FE E TT AL L GR F R V T++ EE F N
Sbjct: 504 KIFVKFETIEATTAALKSLAGRKFSDRTVVTTYFSEENFDVN 545
>gi|302813365|ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
gi|300143770|gb|EFJ10458.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
Length = 353
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 266 KSVNFNGP-----PTRVLLLRNMVGPGE-VDDELEDEVG----SECAKYGTVTRVLIFEI 315
KS+ NG TRVL L+ V E ++DE DE+ EC K+GTV ++I
Sbjct: 238 KSLTMNGVFPDEGATRVLCLKEAVLEAELIEDEQFDEILEDMRDECGKFGTVLHLVIPRP 297
Query: 316 TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
++ VD ++FV FE + T+A I L+GR F GR V AT+Y EE+F + +
Sbjct: 298 SQAA-EVDGVGKVFVHFEDTGAATRARISLNGRKFDGRAVVATYYPEEQFMVGDFS 352
>gi|410903105|ref|XP_003965034.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 454
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 271 NGPPTRVLLLRNMVGPGE-VDD----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
+G PT VL L NMV P E VDD E+ ++V EC KYG+V + EI P VD
Sbjct: 351 SGMPTEVLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSI---EIPRPVDGVDVP 407
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV++ + KA+ L GR F RVV +YD + + ++E
Sbjct: 408 GCGKIFVEYVSASDCQKAMQALTGRKFANRVVVTKYYDLDLYHRHEF 454
>gi|298710792|emb|CBJ32209.1| RNA-binding protein SiahBP [Ectocarpus siliculosus]
Length = 696
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 275 TRVLLLRNMVGPGEVDDE-LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
+R + L NM+GP + DDE + E+ E GTV ++ + + + V AVR+FV F
Sbjct: 599 SRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAV-WAVRVFVVFS 657
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+T A+ + GRFF GR V+A YD FS+ L
Sbjct: 658 DPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLL 694
>gi|348510223|ref|XP_003442645.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 467
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 271 NGPPTRVLLLRNMVGPGE-VDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPV 322
+G PT VL L NMV P E VDDE LED + EC KYGTV + EI P V
Sbjct: 364 SGMPTEVLCLLNMVMPEELVDDEDYEEILED-IREECCKYGTVRSI---EIPRPVDGVEV 419
Query: 323 DEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV++ + KA+ L GR F RVV +YD + + ++E
Sbjct: 420 PGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF 467
>gi|320588801|gb|EFX01269.1| g-patch DNA repair protein [Grosmannia clavigera kw1407]
Length = 527
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 38/208 (18%)
Query: 180 PPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITT 239
PPP + + GG S GQ A R+MAK GW +G GLG GI
Sbjct: 334 PPPASADDDEGG---------PSSFSSARPGQAGFAARLMAKYGWTKGSGLGADGGGILN 384
Query: 240 PLMARKT-------------DRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVG- 285
PL +K R + + +++S + P+ V++LRNMV
Sbjct: 385 PLRHKKVGGATSGRGRIVGGGRGSRGGRVEARGGESTELQSHVTSSSPSTVVVLRNMVEG 444
Query: 286 ----PGEV-DDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTT 339
E+ D +L E+G EC +YG + RV I + P + +F+QF +
Sbjct: 445 MPDLAAEIADGQLVQEIGEECGEQYGRIERVYI------DVP---SKLVFIQFTDAVSAL 495
Query: 340 KALIDLDGRFFGGRVVRATFYDEERFSK 367
+A+ LDGR F G + +FY+ ++F +
Sbjct: 496 RAVTALDGRIFNGNAIAPSFYNADKFDR 523
>gi|209880792|ref|XP_002141835.1| G-patch domain-containing protein [Cryptosporidium muris RN66]
gi|209557441|gb|EEA07486.1| G-patch domain-containing protein [Cryptosporidium muris RN66]
Length = 165
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 38/45 (84%)
Query: 216 QRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENK 260
Q++M +MGWK+GQGLG+ EQGIT PL+A+K ++++G+I+ ++ K
Sbjct: 121 QKLMERMGWKQGQGLGKDEQGITVPLIAKKLNKQSGIIICDTKTK 165
>gi|302795921|ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
gi|300152483|gb|EFJ19125.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
Length = 360
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 266 KSVNFNGP-----PTRVLLLRNMVGPGE-VDDELEDEVG----SECAKYGTVTRVLIFEI 315
KS+ NG TRVL L+ V E ++DE DE+ EC K+GTV ++I
Sbjct: 245 KSLTMNGVFPDEGATRVLCLKEAVLEAELIEDEQFDEILEDMRDECGKFGTVLHLVIPRP 304
Query: 316 TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
++ VD ++FV FE + T+A I L+GR F GR V AT+Y EE+F + +
Sbjct: 305 SQAA-EVDGVGKVFVHFEDTGAATRARISLNGRKFDGRAVVATYYPEEQFMVGDFS 359
>gi|410903103|ref|XP_003965033.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 446
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 271 NGPPTRVLLLRNMVGPGE-VDD----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
+G PT VL L NMV P E VDD E+ ++V EC KYG+V + EI P VD
Sbjct: 343 SGMPTEVLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSI---EIPRPVDGVDVP 399
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV++ + KA+ L GR F RVV +YD + + ++E
Sbjct: 400 GCGKIFVEYVSASDCQKAMQALTGRKFANRVVVTKYYDLDLYHRHEF 446
>gi|261196608|ref|XP_002624707.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239595952|gb|EEQ78533.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609528|gb|EEQ86515.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ER-3]
gi|327350238|gb|EGE79095.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 570
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ D+V EC+KYG V + + T N +I+
Sbjct: 470 SRVLQLLNMVTTEELMDNDDYEEICDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIY 529
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+F+ SE TKAL L GR F R V T++ EE F N
Sbjct: 530 VEFDNSESATKALKALAGRKFQDRTVVTTYFSEENFEVN 568
>gi|391864554|gb|EIT73849.1| splicing factor U2AF, large subunit [Aspergillus oryzae 3.042]
Length = 538
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV P E+ DE+ D+V ECAKYG V + I + + +IF
Sbjct: 438 SRVLQLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGKIF 497
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+F+ E TT AL L GR F R V T++ EE F N
Sbjct: 498 VKFDSVESTTNALKALAGRKFSDRTVVTTYFSEENFDVN 536
>gi|154280004|ref|XP_001540815.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412758|gb|EDN08145.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 571
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ D+V EC+KYG V + + T N +I+
Sbjct: 471 SRVLQLLNMVTTEELIDNDDYEEICDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIY 530
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+F+ SE TKAL L GR F R V T++ EE F N
Sbjct: 531 VKFDNSESATKALRALAGRKFQDRTVVTTYFSEENFEVN 569
>gi|317139209|ref|XP_001817348.2| splicing factor u2af large subunit [Aspergillus oryzae RIB40]
Length = 538
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV P E+ DE+ D+V ECAKYG V + I + + +IF
Sbjct: 438 SRVLQLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGKIF 497
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+F+ E TT AL L GR F R V T++ EE F N
Sbjct: 498 VKFDSVESTTNALKALAGRKFSDRTVVTTYFSEENFDVN 536
>gi|410903109|ref|XP_003965036.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 4
[Takifugu rubripes]
Length = 455
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 271 NGPPTRVLLLRNMVGPGE-VDD----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
+G PT VL L NMV P E VDD E+ ++V EC KYG+V + EI P VD
Sbjct: 352 SGMPTEVLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSI---EIPRPVDGVDVP 408
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV++ + KA+ L GR F RVV +YD + + ++E
Sbjct: 409 GCGKIFVEYVSASDCQKAMQALTGRKFANRVVVTKYYDLDLYHRHEF 455
>gi|238482353|ref|XP_002372415.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
gi|220700465|gb|EED56803.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
Length = 556
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV P E+ DE+ D+V ECAKYG V + I + + +IF
Sbjct: 456 SRVLQLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGKIF 515
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+F+ E TT AL L GR F R V T++ EE F N
Sbjct: 516 VKFDSVESTTNALKALAGRKFSDRTVVTTYFSEENFDVN 554
>gi|240279650|gb|EER43155.1| splicing factor u2af large subunit [Ajellomyces capsulatus H143]
gi|325092783|gb|EGC46093.1| splicing factor u2af large subunit [Ajellomyces capsulatus H88]
Length = 572
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ D+V EC+KYG V + + T N +I+
Sbjct: 472 SRVLQLLNMVTTEELIDNDDYEEICDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIY 531
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+F+ SE TKAL L GR F R V T++ EE F N
Sbjct: 532 VKFDNSESATKALRALAGRKFQDRTVVTTYFSEENFEVN 570
>gi|225562835|gb|EEH11114.1| splicing factor u2af large subunit [Ajellomyces capsulatus G186AR]
Length = 571
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ D+V EC+KYG V + + T N +I+
Sbjct: 471 SRVLQLLNMVTTEELIDNDDYEEICDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIY 530
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+F+ SE TKAL L GR F R V T++ EE F N
Sbjct: 531 VKFDNSESATKALRALAGRKFQDRTVVTTYFSEENFEVN 569
>gi|119606815|gb|EAW86409.1| RNA binding motif protein 17, isoform CRA_e [Homo sapiens]
Length = 57
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 283 MVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKA 341
MVG GEVD++LE E EC KYG V + +IFEI P P DEAVRIF++FER E K
Sbjct: 1 MVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDDEAVRIFLEFERVESAIKG 57
>gi|157132061|ref|XP_001662443.1| splicing factor u2af large subunit [Aedes aegypti]
gi|108881728|gb|EAT45953.1| AAEL002818-PA [Aedes aegypti]
Length = 418
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 271 NGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
+GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P VD
Sbjct: 315 SGPPTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVVRSV---EIPRPIEGVDVP 371
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 372 GCGKVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 418
>gi|195057468|ref|XP_001995263.1| GH23055 [Drosophila grimshawi]
gi|193899469|gb|EDV98335.1| GH23055 [Drosophila grimshawi]
Length = 453
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T VL L NMV P E+ D E ED ++ ECAK+G +V+ +I P P
Sbjct: 350 GKATEVLCLLNMVMPDELLDDAEYEDIRKDIKEECAKFG---KVISIKIPRPFGESPQPG 406
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+++V+FE ++ KAL L GR F GR+V +FYD +F + +
Sbjct: 407 CGKVYVRFETTDVCKKALKALSGRRFSGRIVMTSFYDPNKFKRKDF 452
>gi|47217926|emb|CAG02209.1| unnamed protein product [Tetraodon nigroviridis]
Length = 600
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGE-VDDE----LEDEVGSECAKYGTVTRVLIFEITEP- 318
++ + +G PT VL L NMV P E VDDE + ++V EC KYG V + EI P
Sbjct: 491 LQRLQTSGVPTEVLCLLNMVVPEELVDDEDYEEILEDVREECCKYGGVRSI---EIPRPV 547
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV++ + KA+ L GR F RVV +YD + + ++E
Sbjct: 548 DGVEVPGCGKIFVEYVSASDCQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF 600
>gi|402590758|gb|EJW84688.1| hypothetical protein WUBG_04401 [Wuchereria bancrofti]
Length = 477
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEI--TEPNFPVDE 324
GPPT VL L NMV E+ D+E ED ++ ECAKYG V + EI + P V
Sbjct: 375 GPPTEVLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKSL---EIPRSVPGVDVTG 431
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F ++ KA L GR F R V ++YD + + + +
Sbjct: 432 VGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDMYHRRQF 477
>gi|347968827|ref|XP_311994.4| AGAP002908-PA [Anopheles gambiae str. PEST]
gi|333467820|gb|EAA08228.4| AGAP002908-PA [Anopheles gambiae str. PEST]
Length = 446
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 20/195 (10%)
Query: 187 SGGGGGGFTIGKSETSGLGLGAGG----QMTAAQRMMAKMGWKEGQGLGRQEQGITTPLM 242
S G F + K +GLG G + T + +A + G LG ++ + +
Sbjct: 261 SFGQLKAFNLVKDAATGLGKGYAFAEYVEYTVTDQAIAGLN---GMQLGDKKLIVQRASV 317
Query: 243 ARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEV 297
K A V A + V +GPPT VL L NMV P E+ DE E +++
Sbjct: 318 GAKNSNAAVV---APVQIQVPGLSLVGSSGPPTEVLCLLNMVTPDELKDEEEYEDILEDI 374
Query: 298 GSECAKYGTVTRVLIFEITEPNFPVDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
EC KYG V V EI P VD ++FV+F KA L GR F RVV
Sbjct: 375 REECNKYGVVRSV---EIPRPIEGVDVPGCGKVFVEFNSIVDCQKAQQALTGRKFSDRVV 431
Query: 356 RATFYDEERFSKNEL 370
+++D +++ + E
Sbjct: 432 VTSYFDPDKYHRREF 446
>gi|170575889|ref|XP_001893425.1| U2 auxiliary factor 65 kDa subunit [Brugia malayi]
gi|158600599|gb|EDP37742.1| U2 auxiliary factor 65 kDa subunit, putative [Brugia malayi]
Length = 502
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEI--TEPNFPVDE 324
GPPT VL L NMV E+ D+E ED ++ ECAKYG V + EI + P V
Sbjct: 400 GPPTEVLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKSL---EIPRSVPGVDVTG 456
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F ++ KA L GR F R V ++YD + + + +
Sbjct: 457 VGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDMYHRRQF 502
>gi|84996941|ref|XP_953192.1| RNA binding protein [Theileria annulata strain Ankara]
gi|65304188|emb|CAI76567.1| RNA binding protein, putative [Theileria annulata]
Length = 479
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNF-PVDEAVRIFVQFE 333
+ V+++ NMV P VD+ L++EV EC KYGTVT V + +F P ++++ +FV F
Sbjct: 387 SNVIVIYNMVDPKLVDENLQNEVKDECNKYGTVTSVYL------HFSPNNDSLSVFVVFN 440
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+ A+ L+ R+F GR + YD +
Sbjct: 441 TPQDADSAVRALNTRWFNGRQIMCKTYDASAY 472
>gi|452984158|gb|EME83915.1| hypothetical protein MYCFIDRAFT_202818 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR-------AGVIVNASENK-- 260
GQ A+R+M K+GW++GQGLG GITT ++A+ R+ G +V A+ K
Sbjct: 19 GQSGFAERLMKKLGWEKGQGLGASGDGITTAIIAKAEKRKKKSDAEGGGYVVPANMGKIV 78
Query: 261 SEKKVK---SVNFNGPP--------TRVLLLRNMVGPGEVDDELED-----EVGSECA-K 303
KK K + P T V+ L M+ +VD E+ + E+G E +
Sbjct: 79 GGKKAKPKPGAEDSTPQPDSLPDKMTEVIKLEGMLENMDVDHEIAENNLMQEIGDEMGDQ 138
Query: 304 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
YG V R+ I+ +FV+F + + +DG F V A F+D E
Sbjct: 139 YGKVERLFIWRKHAGGND-----DVFVKFTSPLSAVRCMKGMDGTEFADNQVVAKFWDTE 193
Query: 364 RFSKNEL 370
+F E
Sbjct: 194 KFENGEY 200
>gi|198432988|ref|XP_002130386.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 1 [Ciona intestinalis]
Length = 482
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 272 GPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
GP T VL L NMV P E+ D E+ ++V EC K G+V + EI P + EA
Sbjct: 378 GPATTVLCLMNMVLPEELTDDEEYEEIMEDVKDECGKLGSVVSL---EIPRPGPGLTEAD 434
Query: 327 ---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+I+V+F T KA L GR F RVV +F+D ER+ + +
Sbjct: 435 GVGKIYVEFANHLDTQKAAQALSGRKFSNRVVVTSFFDPERYHHRQFS 482
>gi|312372039|gb|EFR20089.1| hypothetical protein AND_20681 [Anopheles darlingi]
Length = 384
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 271 NGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
+GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P VD
Sbjct: 281 SGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSV---EIPRPIEGVDVP 337
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 338 GCGKVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 384
>gi|198432986|ref|XP_002130494.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 2 [Ciona intestinalis]
Length = 472
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 272 GPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
GP T VL L NMV P E+ D E+ ++V EC K G+V + EI P + EA
Sbjct: 368 GPATTVLCLMNMVLPEELTDDEEYEEIMEDVKDECGKLGSVVSL---EIPRPGPGLTEAD 424
Query: 327 ---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+I+V+F T KA L GR F RVV +F+D ER+ + +
Sbjct: 425 GVGKIYVEFANHLDTQKAAQALSGRKFSNRVVVTSFFDPERYHHRQFS 472
>gi|393909510|gb|EJD75480.1| hypothetical protein LOAG_17389 [Loa loa]
Length = 502
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEI--TEPNFPVDE 324
GPPT VL L NMV E+ D+E ED ++ ECAKYG V + EI + P V
Sbjct: 400 GPPTEVLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKSL---EIPRSVPGVDVTG 456
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F ++ KA L GR F R V ++YD + + + +
Sbjct: 457 VGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDMYHRRQF 502
>gi|195167317|ref|XP_002024480.1| GL15893 [Drosophila persimilis]
gi|198469588|ref|XP_001355063.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
gi|194107878|gb|EDW29921.1| GL15893 [Drosophila persimilis]
gi|198146942|gb|EAL32119.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP- 318
+ +V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P
Sbjct: 309 LSTVVSSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSV---EIPRPI 365
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 366 EGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 418
>gi|91088649|ref|XP_974465.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor 2 [Tribolium castaneum]
Length = 450
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP--NF 320
V +GPPT VL L NMV P E+ DE E +++ EC KYG V + EI P
Sbjct: 344 VGASGPPTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVVRSI---EIPRPIDGV 400
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 401 EVPGCGKVFVEFNSVLDCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 450
>gi|195448282|ref|XP_002071589.1| GK10063 [Drosophila willistoni]
gi|194167674|gb|EDW82575.1| GK10063 [Drosophila willistoni]
Length = 416
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP- 318
+ +V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P
Sbjct: 307 LSTVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSV---EIPRPI 363
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 364 EGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 416
>gi|194770152|ref|XP_001967161.1| GF19596 [Drosophila ananassae]
gi|190619281|gb|EDV34805.1| GF19596 [Drosophila ananassae]
Length = 416
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP- 318
+ +V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P
Sbjct: 307 LSTVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSV---EIPRPI 363
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 364 EGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 416
>gi|195042782|ref|XP_001991497.1| GH12033 [Drosophila grimshawi]
gi|195134983|ref|XP_002011915.1| GI14308 [Drosophila mojavensis]
gi|193901255|gb|EDW00122.1| GH12033 [Drosophila grimshawi]
gi|193909169|gb|EDW08036.1| GI14308 [Drosophila mojavensis]
Length = 416
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP- 318
+ +V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P
Sbjct: 307 LSTVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSV---EIPRPI 363
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 364 EGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 416
>gi|270011684|gb|EFA08132.1| hypothetical protein TcasGA2_TC005736 [Tribolium castaneum]
Length = 432
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP--NF 320
V +GPPT VL L NMV P E+ DE E +++ EC KYG V + EI P
Sbjct: 326 VGASGPPTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVVRSI---EIPRPIDGV 382
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 383 EVPGCGKVFVEFNSVLDCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 432
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 276 RVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERS 335
R +++RN+ P E+D+ E+E+ +EC+ +G V +V+I +V+ +V F +
Sbjct: 861 RCMVMRNLGSPAELDEYFEEEIKNECSSFGAVEKVVITN-------EGTSVKAYVLFRDA 913
Query: 336 EQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
L +GR+F G +V+A +Y+ F N L
Sbjct: 914 PSCAMCLSKQNGRYFSGYLVKAEYYNVNLFLNNVL 948
>gi|114052735|ref|NP_001040494.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Bombyx mori]
gi|95103122|gb|ABF51502.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Bombyx mori]
Length = 417
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
GPPT VL L NMV P E+ DE E +++ EC KYG V + EI P V
Sbjct: 315 GPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGVVRSI---EIPRPIEGVEVPG 371
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 372 CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 417
>gi|17136764|ref|NP_476891.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|386764552|ref|NP_001245710.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
gi|195351420|ref|XP_002042232.1| GM13406 [Drosophila sechellia]
gi|195479195|ref|XP_002100800.1| GE15975 [Drosophila yakuba]
gi|195555160|ref|XP_002077042.1| GD24494 [Drosophila simulans]
gi|4033485|sp|Q24562.1|U2AF2_DROME RecName: Full=Splicing factor U2AF 50 kDa subunit; AltName: Full=U2
auxiliary factor 50 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|349761|gb|AAA03548.1| RNA binding protein [Drosophila melanogaster]
gi|7293214|gb|AAF48596.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|17861976|gb|AAL39465.1| LD03714p [Drosophila melanogaster]
gi|194124075|gb|EDW46118.1| GM13406 [Drosophila sechellia]
gi|194188324|gb|EDX01908.1| GE15975 [Drosophila yakuba]
gi|194203060|gb|EDX16636.1| GD24494 [Drosophila simulans]
gi|220943258|gb|ACL84172.1| U2af50-PA [synthetic construct]
gi|220953438|gb|ACL89262.1| U2af50-PA [synthetic construct]
gi|383293440|gb|AFH07423.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
Length = 416
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP- 318
+ +V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P
Sbjct: 307 LSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSV---EIPRPI 363
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 364 EGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 416
>gi|195393580|ref|XP_002055432.1| GJ19364 [Drosophila virilis]
gi|194149942|gb|EDW65633.1| GJ19364 [Drosophila virilis]
Length = 476
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP- 318
+ +V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P
Sbjct: 367 LSTVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSV---EIPRPI 423
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 424 EGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 476
>gi|194893848|ref|XP_001977952.1| GG19328 [Drosophila erecta]
gi|190649601|gb|EDV46879.1| GG19328 [Drosophila erecta]
Length = 416
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP- 318
+ +V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P
Sbjct: 307 LSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSV---EIPRPI 363
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 364 EGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 416
>gi|195346998|ref|XP_002040041.1| GM15574 [Drosophila sechellia]
gi|194135390|gb|EDW56906.1| GM15574 [Drosophila sechellia]
Length = 445
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT L L NMV P E+ D+ + ++ ECAK+G V + I P FP
Sbjct: 342 GSPTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGP-FPKRGCG 400
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FVQFE E + KAL L GR F R+V ++YD E++ ++L
Sbjct: 401 KVFVQFESVEDSQKALKALSGRKFSDRIVMTSYYDPEKYLADDL 444
>gi|295663747|ref|XP_002792426.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279096|gb|EEH34662.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 567
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
RVL L NMV E+ D E+ D+V EC+KYG V + + T N +I+V
Sbjct: 468 RVLQLLNMVTTDELLDNDDYEEICDDVRDECSKYGQVVELKVPRPTGNNKQSAGVGKIYV 527
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+F+ SE +KAL L GR F R V T++ EE F N
Sbjct: 528 KFDNSESASKALKALAGRKFQDRTVVTTYFSEENFEVN 565
>gi|225677913|gb|EEH16197.1| splicing factor U2AF 65 kDa subunit ) [Paracoccidioides
brasiliensis Pb03]
gi|226287345|gb|EEH42858.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 567
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
RVL L NMV E+ D E+ D+V EC+KYG V + + T N +I+V
Sbjct: 468 RVLQLLNMVTTDELLDNDDYEEICDDVRDECSKYGQVVELKVPRPTGNNKQSAGVGKIYV 527
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+F+ SE +KAL L GR F R V T++ EE F N
Sbjct: 528 KFDNSESASKALKALAGRKFQDRTVVTTYFSEENFEVN 565
>gi|400602736|gb|EJP70338.1| splicing factor U2AF 65 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 576
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 272 GPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G TRVL L NMV E+ D E+ D+V EC+KYG ++L ++ P ++
Sbjct: 473 GEATRVLQLLNMVTAEELLDNDDYEEICDDVRDECSKYG---KILDLKVPRPAGGSRQSA 529
Query: 327 ---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
RIFV+FE + TT AL L GR F R V T++ EE F
Sbjct: 530 GVGRIFVKFESVDATTSALKALAGRKFADRTVVTTYFPEENF 571
>gi|384496094|gb|EIE86585.1| hypothetical protein RO3G_11296 [Rhizopus delemar RA 99-880]
Length = 502
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 14/105 (13%)
Query: 275 TRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
TRVL L NMV P E++D+ E +++ ECAK+G + + I P D+ V
Sbjct: 403 TRVLQLMNMVSPEELEDDEEYQDIWEDIAEECAKFGNIVDMKI-----PKPQKDQQVPGC 457
Query: 327 -RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
IFV++E +++T AL L GR F R V ATF DE+ + +
Sbjct: 458 GLIFVRYETTDETLAALRALAGRKFADRTVVATFVDEQNYLSDNF 502
>gi|347968831|ref|XP_003436305.1| AGAP002908-PB [Anopheles gambiae str. PEST]
gi|333467821|gb|EGK96708.1| AGAP002908-PB [Anopheles gambiae str. PEST]
Length = 144
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 271 NGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
+GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P VD
Sbjct: 41 SGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSV---EIPRPIEGVDVP 97
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 98 GCGKVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 144
>gi|386764548|ref|NP_001245708.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
gi|383293438|gb|AFH07421.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
Length = 427
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP- 318
+ +V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P
Sbjct: 318 LSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSV---EIPRPI 374
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 375 EGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 427
>gi|389610875|dbj|BAM19048.1| U2 small nuclear riboprotein auxiliary factor 50 [Papilio polytes]
Length = 422
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDE-- 324
GP T VL L NMV P E+ DE E +++ EC KYG V + EI P VD
Sbjct: 320 GPATEVLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGCVRSI---EIPRPLEGVDVPG 376
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV ++YD +++ + E
Sbjct: 377 CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYYDPDKYHRREF 422
>gi|195585954|ref|XP_002082743.1| GD25073 [Drosophila simulans]
gi|194194752|gb|EDX08328.1| GD25073 [Drosophila simulans]
Length = 445
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT L L NMV P E+ D+ + ++ ECAK+G V + I P FP
Sbjct: 342 GSPTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGP-FPKRGCG 400
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FVQFE E + KAL L GR F R+V ++YD E++ ++L
Sbjct: 401 KVFVQFESVEDSQKALKALSGRKFSDRIVMTSYYDPEKYLADDL 444
>gi|116192501|ref|XP_001222063.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
gi|88181881|gb|EAQ89349.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
Length = 566
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV P E+ D E+ D+V EC K+G ++L +I P ++ +
Sbjct: 467 RVLQLLNMVTPDELMDNDDYEEIRDDVQEECEKFG---KILSIKIPRPAGGSRQSAGVGK 523
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
IF++FE E TKAL L GR F R V T++ EE F N
Sbjct: 524 IFIKFETPETATKALQALAGRKFADRTVVTTYFPEENFDVN 564
>gi|440468063|gb|ELQ37246.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae Y34]
gi|440489023|gb|ELQ68704.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae P131]
Length = 640
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 277 VLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---RI 328
VL L NMV E+ D E+ ++V ECAKYGTV ++ P+ +A +I
Sbjct: 522 VLQLLNMVTADELMDNDDYEEICEDVQEECAKYGTVIE---LKVPRPSSGAKQAAGVGKI 578
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+V+F+ E +TKAL L GR F R V T++ EE F+ N
Sbjct: 579 YVKFDSIESSTKALKALGGRKFADRTVVTTYFPEENFAVN 618
>gi|386764550|ref|NP_001245709.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
gi|383293439|gb|AFH07422.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
Length = 360
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP- 318
+ +V +GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P
Sbjct: 251 LSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSV---EIPRPI 307
Query: 319 -NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 308 EGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 360
>gi|389642205|ref|XP_003718735.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
gi|351641288|gb|EHA49151.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
Length = 620
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 277 VLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---RI 328
VL L NMV E+ D E+ ++V ECAKYGTV ++ P+ +A +I
Sbjct: 522 VLQLLNMVTADELMDNDDYEEICEDVQEECAKYGTVIE---LKVPRPSSGAKQAAGVGKI 578
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+V+F+ E +TKAL L GR F R V T++ EE F+ N
Sbjct: 579 YVKFDSIESSTKALKALGGRKFADRTVVTTYFPEENFAVN 618
>gi|347968829|ref|XP_003436304.1| AGAP002908-PC [Anopheles gambiae str. PEST]
gi|333467822|gb|EGK96709.1| AGAP002908-PC [Anopheles gambiae str. PEST]
Length = 250
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 271 NGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
+GPPT VL L NMV P E+ DE E +++ EC KYG V V EI P VD
Sbjct: 147 SGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSV---EIPRPIEGVDVP 203
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 204 GCGKVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 250
>gi|312085420|ref|XP_003144672.1| U2af splicing factor protein 1 [Loa loa]
Length = 143
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEI--TEPNFPVDE 324
GPPT VL L NMV E+ D+E ED ++ ECAKYG V + EI + P V
Sbjct: 41 GPPTEVLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKSL---EIPRSVPGVDVTG 97
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F ++ KA L GR F R V ++YD + + + +
Sbjct: 98 VGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDMYHRRQF 143
>gi|170054347|ref|XP_001863087.1| splicing factor u2af large subunit [Culex quinquefasciatus]
gi|167874693|gb|EDS38076.1| splicing factor u2af large subunit [Culex quinquefasciatus]
Length = 438
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 271 NGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
+GPPT VL L NMV P E+ DE E +++ EC KYG V EI P VD
Sbjct: 335 SGPPTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVVRSA---EIPRPIEGVDVP 391
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 392 GCGKVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 438
>gi|367042858|ref|XP_003651809.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
gi|346999071|gb|AEO65473.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
Length = 563
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ D+V EC K+GTV + I T +IF
Sbjct: 463 SRVLQLLNMVTADELMDNDDYEEIRDDVQDECEKFGTVLSLKIPRPTGGGRQSAGVGKIF 522
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
++FE E TKAL L GR F R V AT++ EE F N
Sbjct: 523 IKFETPEVATKALRGLAGRKFADRTVVATYFPEENFEVN 561
>gi|302411252|ref|XP_003003459.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261357364|gb|EEY19792.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
Length = 568
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ ++V ECAKYGTV V + + +IF
Sbjct: 468 SRVLQLLNMVTADELMDNEDYEEIVEDVQEECAKYGTVLEVKVPRPVGGSRQSAGVGKIF 527
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V++E E T KAL L GR F R V T++ EE F N
Sbjct: 528 VKYETKEATKKALQSLAGRKFADRTVVTTYFPEENFDVN 566
>gi|430813569|emb|CCJ29085.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 545
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 274 PTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLI---FEITEPNFPVDEA 325
PTRVL + NMV P E+ D E+ +++ EC+KYG V + I + NF V
Sbjct: 445 PTRVLQMFNMVTPEELQDDDEYEEISEDIRDECSKYGKVLDLKIPRGIGGSRSNFGVG-- 502
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++V+FE KA+ DL GR F R V +FY EE +
Sbjct: 503 -KVYVRFETEMSCLKAMKDLAGRKFSDRTVLTSFYPEENY 541
>gi|302816055|ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L+ +V P E+ DDE E+ ++ EC KYG+V +++ V ++
Sbjct: 313 PTKVVCLKQVVSPDELKEDDEYEEILEDMREECGKYGSVATLVLPRPKSDGEEVAGVGKV 372
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
FV++ E+ KA L+GR FGG +V A ++ E++F + E
Sbjct: 373 FVEYATIEEAIKAKNSLNGRKFGGNIVAAVYFPEDKFLQGE 413
>gi|346322740|gb|EGX92338.1| G-patch DNA repair protein (Drt111), putative [Cordyceps militaris
CM01]
Length = 430
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 110/295 (37%), Gaps = 66/295 (22%)
Query: 100 YDPARPNDYEDYRREKKKKAVDAEIRRELERRRQ--------EGEERERREREERENASA 151
YDPARP + ++Y R +K E + L R R+ E+ + R N A
Sbjct: 148 YDPARPTNVDEYLRSDEKVDEVREWKALLYRHRKGKAPESDVSSEDEDERTTIRPHNQFA 207
Query: 152 ------------------------SRLNMSGEEAWKRRAAMSSGGVPP-------RSPSP 180
N SG++A+ RR A+SS PP S
Sbjct: 208 PPPSYGAVPPPPASPPTTTAAAPTPPDNASGDDAYARRLAISSSQAPPPRATSSTTISSA 267
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P + + S S L GQ A R+MAK GW G GLG GI P
Sbjct: 268 PILYTTTEPQQDPPPSSSSPRSALP----GQAGFAHRLMAKYGWASGTGLGADSSGIVNP 323
Query: 241 LMARKTDRRAGVIVNA---SENKSEKKVKSVNFNGPP-----TRVLLLRNMVG-----PG 287
L + RR + +E ++ K+ + V++L +MV
Sbjct: 324 LRVQVEKRRRKADADGGGWAEPANKAKIVGGGGKRAGAAQELSDVVVLLHMVDNMPDLAA 383
Query: 288 EVDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKA 341
EV++ L E+G EC KYG V RV I T+ R+F++F KA
Sbjct: 384 EVENGLGQEIGEECGEKYGRVERVYIDTATQ---------RVFIKFTDQISALKA 429
>gi|302820212|ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L+ +V P E+ DDE E+ ++ EC KYG+V +++ V ++
Sbjct: 312 PTKVVCLKQVVSPDELKEDDEYEEILEDMREECGKYGSVATLVLPRPKSNGEEVAGVGKV 371
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
FV++ E+ KA L+GR FGG +V A ++ E++F + E
Sbjct: 372 FVEYATIEEAIKAKNSLNGRKFGGNIVAAVYFPEDKFLQGE 412
>gi|156086444|ref|XP_001610631.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797884|gb|EDO07063.1| conserved hypothetical protein [Babesia bovis]
Length = 400
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 244 RKTDRRAGVIVNA------SENKSEKKVKSVNF--NGPPTRVLLLRNMVGPGEVDDELE- 294
+K D + + V+A SE+ +++++S + + PTRVLLL N+V +++D+ E
Sbjct: 216 KKRDVKVELAVDALERGAMSEDFMKQQIESCDIMKSQIPTRVLLLANLVSKEDLEDDAEY 275
Query: 295 ----DEVGSECAKYGTVTRV---------LIFEITEPNFPVDEAVRIFVQFERSEQTTKA 341
D+V EC +YG V RV + EI +F FV F E +KA
Sbjct: 276 YDIIDDVRCECEEYGPVVRVEMPRVPKGLTLDEIRNMDFSAVGCA--FVLFSNIEGASKA 333
Query: 342 LIDLDGRFFGGRVVRATFYDEERFSKNELA 371
LDGR FG R+V F+ E F E +
Sbjct: 334 RKVLDGRKFGHRIVECHFFSELLFHVGEFS 363
>gi|322699686|gb|EFY91446.1| G-patch domain containing protein [Metarhizium acridum CQMa 102]
Length = 485
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR---------------AGVIV 254
GQ A R+M+K GW +G GLG E GI PL + RR G I+
Sbjct: 333 GQAGFAHRLMSKYGWMQGTGLGANETGIINPLRVQVEKRRKKADADGGGWAEPGGKGRII 392
Query: 255 NASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVT 308
+ +S K G + V++L+NM+ E+ D L E+G EC KYG V
Sbjct: 393 GSKSKESAGKF------GAMSDVVVLQNMLENMPDLQAEIADGLGQEIGEECGEKYGRVE 446
Query: 309 RVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALI 343
R+ I + T R+F++F + I
Sbjct: 447 RLYIDQPTR---------RVFIKFTDQVSALRVCI 472
>gi|348681357|gb|EGZ21173.1| hypothetical protein PHYSODRAFT_488481 [Phytophthora sojae]
Length = 640
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 269 NFNGPPTRVLLLRNMVGPGEV--DDE---LEDEVGSECAKYGTVTRVLIFEITEPNF--P 321
NF P+ VL + NMV E+ DDE L ++V EC ++G VT + EI P
Sbjct: 534 NFEDQPSAVLKMANMVSIDELRDDDEYADLAEDVEEECKRFGNVTGL---EIPRPKDGEE 590
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
V I+V+FE + AL L+GR FGG +V+ T++ ++F K E +
Sbjct: 591 VPGLGCIYVRFEEEKNAVDALKALNGRKFGGNIVKVTYFPLDKFDKQEFS 640
>gi|134075845|emb|CAL00224.1| unnamed protein product [Aspergillus niger]
Length = 598
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV P E+ DE+ D+V EC+KYGTV + + T + +IF
Sbjct: 478 SRVLQLLNMVTPEELMDPEDYDEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGKIF 537
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
V+F+ E TT AL L GR F R V T++ E R S
Sbjct: 538 VKFDTVESTTNALKALAGRKFSDRTVVTTYFSEVRSS 574
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R +LLRNM P E + ELED+V +EC KYG V + +
Sbjct: 454 KTETKPLPVNVN-MASRCVLLRNMFDPAEEEGEAWIKELEDDVRAECEDKYGHVVHIAL- 511
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 512 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R +LLRNM P E + ELED+V +EC KYG V + +
Sbjct: 454 KTETKPLPVNVN-MASRCVLLRNMFDPAEEEGEAWIKELEDDVRAECEDKYGHVVHIAL- 511
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 512 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
>gi|350635494|gb|EHA23855.1| hypothetical protein ASPNIDRAFT_209800 [Aspergillus niger ATCC
1015]
Length = 566
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV P E+ DE+ D+V EC+KYGTV + + T + +IF
Sbjct: 446 SRVLQLLNMVTPEELMDPEDYDEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGKIF 505
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
V+F+ E TT AL L GR F R V T++ E R S
Sbjct: 506 VKFDTVESTTNALKALAGRKFSDRTVVTTYFSEVRSS 542
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R ++LRNM PGE + ELED+V +EC KYG V + +
Sbjct: 456 KTETKPLPVNVN-MASRCVMLRNMFDPGEEEGESWIKELEDDVRAECEEKYGHVVHIAL- 513
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F+R + A+ L+GRFFGG+ + A
Sbjct: 514 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRFFGGKQITA 550
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R +LLRNM P E + ELED+V +EC KYG V + +
Sbjct: 456 KTETKPLPVNVN-MASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIAL- 513
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 514 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRFFGGRQITA 550
>gi|321479007|gb|EFX89963.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Daphnia pulex]
Length = 487
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 272 GPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE-- 324
G PT VL L NMV P E+ D E+ D++ EC ++G V V EI P VD+
Sbjct: 384 GQPTEVLCLLNMVTPEELRDDEEYEEIVDDIREECNRHGAVRSV---EIPRPLEGVDDVP 440
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F R+V +FY+ ER+ + +
Sbjct: 441 GVGKVFVEFISVSDCVKAQQALTGRKFANRIVVTSFYEPERYHRRDF 487
>gi|380481793|emb|CCF41637.1| U2 snRNP auxilliary factor [Colletotrichum higginsianum]
Length = 550
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
TRVL L NMV P E+ D E++++V EC+K+G V + I + +IF
Sbjct: 450 TRVLQLLNMVTPEELMDNDDYEEIKEDVQEECSKFGNVLDIKIPRPVGGSRQSAGVGKIF 509
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V+FE +E KAL L GR F R V T++ EE F
Sbjct: 510 VRFENTESAKKALQALAGRKFADRTVVTTYFPEENF 545
>gi|238601653|ref|XP_002395467.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
gi|215466258|gb|EEB96397.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
Length = 180
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +L++NM PGE D EL D+V EC KYG VT + + + T+ I
Sbjct: 88 SRSVLMKNMFDPGEETERDWDKELADDVKGECGEKYGKVTAIKVEKETQG--------EI 139
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+V+F+ E KA+ L+GR+FGG+ V ATF
Sbjct: 140 YVKFDSIESAKKAVQGLNGRWFGGKQVTATF 170
>gi|408397958|gb|EKJ77095.1| hypothetical protein FPSE_02739 [Fusarium pseudograminearum CS3096]
Length = 554
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ ++V EC+KYG + V + T + +IF
Sbjct: 454 SRVLQLLNMVTAEELLDNDDYEEICEDVREECSKYGKILDVKVPRPTGGSRQSAGVGKIF 513
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V++E +E TTKAL L GR F R V T++ EE F
Sbjct: 514 VKYEHTEDTTKALQALAGRKFADRTVVTTYFPEENF 549
>gi|291241059|ref|XP_002740425.1| PREDICTED: U2 (RNU2) small nuclear RNA auxiliary factor 2-like
[Saccoglossus kowalevskii]
Length = 466
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
GP T VL L NMV P E+ DE + D+V EC KYG V + EI P V
Sbjct: 364 GPTTEVLCLMNMVTPDELQDEEEYEEILDDVRQECGKYGQVRSL---EIPRPIEGVEVPG 420
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV+F ++ KA L GR F R+V +F D +++ + E
Sbjct: 421 CGKIFVEFTNVLESQKAQTALAGRKFNNRIVVTSFCDPDKYHRREF 466
>gi|119482894|ref|XP_001261475.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
gi|119409630|gb|EAW19578.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
Length = 563
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+RVL L NMV P E+ D E+ D+V EC+KYG +VL ++ P+ ++
Sbjct: 463 SRVLQLLNMVTPEELLDNDDYEEICDDVREECSKYG---KVLDLKVPRPSGGSRQSPGVG 519
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+I+V+F+ E T AL L GR F R V T++ EE F N
Sbjct: 520 KIYVKFDTVESATNALKALAGRKFSDRTVVTTYFSEENFDVN 561
>gi|66809079|ref|XP_638262.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466725|gb|EAL64776.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1035
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
P+R L+L+N P ++D ED++ S C ++G + +++I + ++V++++ F+
Sbjct: 945 PSRCLVLKNAGSPDDIDSSFEDDIRSGCNEFGEIEKLVIKSDS-------QSVKVYILFK 997
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
L+G++F ++A FYD F+K+
Sbjct: 998 DLYSGMACQSKLNGKYFSYHCIKAEFYDVHLFNKD 1032
>gi|71027151|ref|XP_763219.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350172|gb|EAN30936.1| hypothetical protein TP03_0201 [Theileria parva]
Length = 509
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 28/157 (17%)
Query: 221 KMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLL 280
K G++ + QGI +P + + N S ++E PTRVLLL
Sbjct: 321 KQGYRVILAIDAVTQGIISPQQIKTQ------LANCSLMRAE----------IPTRVLLL 364
Query: 281 RNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEI----TEPNFPVDEAVRI--- 328
N+V E++D+ E D+V EC YG V RV + + TE + +
Sbjct: 365 SNLVSKDELEDDEEYVDIIDDVRCECELYGVVLRVELPRVPKGLTEEEMKAFDPTSVGSA 424
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
FV F E +KA LDGR FG R V A F+ E F
Sbjct: 425 FVLFSTVESASKARKVLDGRKFGQRTVHAHFFSELYF 461
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R ++LRNM P E + ELED+V +EC KYG V + +
Sbjct: 459 KTEAKPLPVNVN-MASRCVMLRNMFDPNEEEGEAWIKELEDDVRAECEDKYGHVVHIAL- 516
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 517 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRFFGGRQITA 553
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R +LLRNM P E + E LED+V +EC KYG V + +
Sbjct: 454 KTEVKPLPVNVN-MASRCVLLRNMFDPSEEEGEAWIKDLEDDVRAECEEKYGHVVHIAL- 511
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 512 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
>gi|237844813|ref|XP_002371704.1| hypothetical protein TGME49_121630 [Toxoplasma gondii ME49]
gi|211969368|gb|EEB04564.1| hypothetical protein TGME49_121630 [Toxoplasma gondii ME49]
Length = 400
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
P+ +++L+N++ E+DD+++DE+ EC K+G V V I + + VR F ++
Sbjct: 307 PSTLIVLKNLMEVAELDDDVKDEIYQECLKHGKVVEVRIHVVAST-----QEVRAFALYQ 361
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
EQ +A+ L+ R F R V+ YD +S+
Sbjct: 362 LPEQANRAVRVLNERSFAKRKVKCELYDMAAYSQ 395
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R ++LRNM P E + ELED+V +EC KYG V + +
Sbjct: 458 KTEAKPLPVNVN-MASRCVMLRNMFDPNEEEGEAWIKELEDDVRAECEDKYGHVVHIAL- 515
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 516 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRFFGGRQITA 552
>gi|346324367|gb|EGX93964.1| splicing factor u2af large subunit [Cordyceps militaris CM01]
Length = 583
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 272 GPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G TRVL L NMV E+ D E+ ++V EC+KYG +VL ++ P ++
Sbjct: 480 GDATRVLQLLNMVTAEELLDNDDYEEICEDVRDECSKYG---KVLDVKVPRPAGGSRQSA 536
Query: 327 ---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
RIFV+FE + TT AL L GR F R V T++ EE F
Sbjct: 537 GVGRIFVKFESVDSTTGALKALAGRKFADRTVVTTYFPEENF 578
>gi|71033471|ref|XP_766377.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353334|gb|EAN34094.1| hypothetical protein TP01_0856 [Theileria parva]
Length = 332
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 52/195 (26%)
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA----------SENKSEK 263
A +MM KMGWK GQGLG+ EQG+ TPL+A+ + + +I+NA + N S
Sbjct: 148 VALKMMEKMGWK-GQGLGKNEQGMVTPLVAKSIGKNSAIIINAPNKPVPITLPNANISNN 206
Query: 264 KVKSVNFNGPPTRVLLLRNMVGPGEVD-----------------DELEDEVGSECAKYGT 306
V +V PT V +++ V E D DELE EV +E +GT
Sbjct: 207 TVTNV-----PTTVEKVKDEVKIDEKDLSRICIILFKGNRKVELDELE-EVLTE---FGT 257
Query: 307 VTRVLIFEITEPN--------------FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGG 352
+ + + N F D ++ + ++E EQ+ + ++ + +F
Sbjct: 258 IIDIKLLNEEMCNKLLQDQRYSEVVGKFKPDSSI-VVCEYETEEQSKRLFLEYNNKFLME 316
Query: 353 RVVRATFYDEERFSK 367
V F +S+
Sbjct: 317 SSVSVLFLSPALYSQ 331
>gi|357146380|ref|XP_003573971.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 597
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT LLL+NM P + D ++ D+V EC+K+G V + + + T A
Sbjct: 497 GTPTEFLLLKNMFDPAVETDPDFDLDIRDDVQEECSKFGVVKHIFVDKHT--------AG 548
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++ F+ S T A L GR+F G+++ ATF +++
Sbjct: 549 FVYLHFDSSTAATSAQRSLHGRWFAGKMITATFMTAQQY 587
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE--AVRI 328
RVL+L NMV P E+ D E++++V EC+KYG V + +I P P + +I
Sbjct: 249 RVLMLLNMVTPEELMDPQEYEEIQEDVHEECSKYGKVEEL---KIPRPQPPKENKGVGKI 305
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
FV+++ E KAL L GR F R V TF+ EE F
Sbjct: 306 FVKYDTPESAQKALRALAGRKFADRTVVVTFFGEEYF 342
>gi|293336330|ref|NP_001169267.1| uncharacterized protein LOC100383130 [Zea mays]
gi|223975957|gb|ACN32166.1| unknown [Zea mays]
gi|413934151|gb|AFW68702.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 318
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 274 PTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT LLL+NM P + D ++ D+V EC+K+G V + + + + A +
Sbjct: 223 PTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDK--------NTAGFV 274
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++QF+ KA L GR+F G+++ ATF ++ +S
Sbjct: 275 YLQFDSVTAAGKAQQALHGRWFAGKMITATFMSDQEYS 312
>gi|342879310|gb|EGU80564.1| hypothetical protein FOXB_08942 [Fusarium oxysporum Fo5176]
Length = 473
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 25/139 (17%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA----------SEN 259
GQ A R+M+K GW +G GLG E GI PL + RR +
Sbjct: 314 GQSGFAHRLMSKYGWTKGSGLGADESGIVNPLRVQVEKRRKKADADGGGWAEPGGKGKII 373
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYGTVTRVLIF 313
++K ++ G + V+LLRNM+ E+ L E+G EC KYG V R+ I
Sbjct: 374 GGKRKEENAGKFGTMSDVILLRNMLENMPNLEEEIAGGLGQEIGEECGEKYGRVERLYID 433
Query: 314 EITEPNFPVDEAVRIFVQF 332
+ E+ R+F++F
Sbjct: 434 Q---------ESRRVFIKF 443
>gi|453080357|gb|EMF08408.1| hypothetical protein SEPMUDRAFT_152084 [Mycosphaerella populorum
SO2202]
Length = 664
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 30/180 (16%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMA------RKTDRRAGVIV--------- 254
GQ + A+R M K+GW++GQGLG +GITT L RK D + G V
Sbjct: 483 GQESFAERHMKKLGWEKGQGLGASGEGITTALKMQAQKRKRKPDAQGGGYVAPANMGKIV 542
Query: 255 ---NASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELED-----EVGSECAK-YG 305
A N E +G + V+ L M+ +V+ E+ + E+G + + YG
Sbjct: 543 GGKKAKPNPGEGVTSGGELDG-MSEVVKLSGMLENLDVEHEIAENNLLQEIGDDMGQEYG 601
Query: 306 TVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V R+ I++ + +FV+F + + + G F G V+A ++D F
Sbjct: 602 QVERLYIWQKKDGG-----NGEVFVKFTSPLSAVRCMKGMGGTLFAGNEVKAEYWDAALF 656
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV P E+ D E+ ++V EC K+G V + I N +I+
Sbjct: 484 SRVLQLLNMVTPEELMDNDDYEEIREDVLEECKKFGNVLSLKIPRPIGGNRQSAGVGKIY 543
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
V+FE+ E TKAL L GR F R V T++ EE + N
Sbjct: 544 VKFEQVESATKALRALAGRKFSDRTVVTTYFPEENYEVN 582
>gi|328721670|ref|XP_001951521.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 416
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDE-- 324
GPPT VL L NMV P E+ DE E +++ EC KYG V + EI P +D
Sbjct: 314 GPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSL---EIPRPIEGIDVPG 370
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++F++F KA L GR F RVV +F + +++ + E
Sbjct: 371 CGKVFIEFNAIVDCQKAQQALAGRKFNNRVVVTSFMEPDKYHRREF 416
>gi|403223258|dbj|BAM41389.1| snRNP splicing factor U2AF [Theileria orientalis strain Shintoku]
Length = 534
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 97/243 (39%), Gaps = 41/243 (16%)
Query: 146 RENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIGKSETSGLG 205
RE A+ ++ E+A + +PP + +N+ G +T E + G
Sbjct: 239 REQIVAASDVLAAEKAKVMTDRLCIVDIPPEADKQTVINLVHSMGEVKYTYFVDEPAESG 298
Query: 206 ------LGAGGQMTAAQRMMA---KMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNA 256
L M ++ M KM ++ + QG+ P +K ++
Sbjct: 299 TNKRVFLFEYMNMDHQKKAMEEIPKMNYRLILAIDAVTQGMIAPEYIKKQLESCAIM--- 355
Query: 257 SENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVL 311
K E PTR LLL N+V E+DD+ E D+V +EC YG V R+
Sbjct: 356 ---KPE----------VPTRALLLGNLVSKEELDDDAEYVDIIDDVKTECEDYGVVLRLE 402
Query: 312 IFEITEPNFPVDEAVR---------IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
+ + P +E +R FV F + +KA LDGR FG R V+A F+ E
Sbjct: 403 LPRV--PKGLSEEEMRSFDESSVGSAFVLFSTVDGASKARKVLDGRKFGNRTVKAHFFSE 460
Query: 363 ERF 365
F
Sbjct: 461 LYF 463
>gi|328721668|ref|XP_003247369.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Acyrthosiphon pisum]
Length = 451
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDE-- 324
GPPT VL L NMV P E+ DE E +++ EC KYG V + EI P +D
Sbjct: 349 GPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSL---EIPRPIEGIDVPG 405
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++F++F KA L GR F RVV +F + +++ + E
Sbjct: 406 CGKVFIEFNAIVDCQKAQQALAGRKFNNRVVVTSFMEPDKYHRREF 451
>gi|413934152|gb|AFW68703.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 300
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 274 PTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT LLL+NM P + D ++ D+V EC+K+G V + + + + A +
Sbjct: 205 PTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDK--------NTAGFV 256
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++QF+ KA L GR+F G+++ ATF ++ +S
Sbjct: 257 YLQFDSVTAAGKAQQALHGRWFAGKMITATFMSDQEYS 294
>gi|193629757|ref|XP_001950852.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Acyrthosiphon
pisum]
Length = 446
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDE-- 324
GPPT VL L NMV P E+ DE E +++ EC KYG V + EI P +D
Sbjct: 344 GPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSL---EIPRPIEGIDVPG 400
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++F++F KA L GR F RVV +F + +++ + E
Sbjct: 401 CGKVFIEFNAIPDCQKAQQALAGRKFNNRVVVTSFMEPDKYHRREF 446
>gi|302790311|ref|XP_002976923.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
gi|302797811|ref|XP_002980666.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300151672|gb|EFJ18317.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300155401|gb|EFJ22033.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
Length = 532
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 17/103 (16%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
GPP+ LLL+NM P E D +++++V EC+K+G V + + + ++ +
Sbjct: 432 GPPSECLLLKNMFDPATETDPEFDIDIKNDVQDECSKFGPVKHISVDKYSQGH------- 484
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD----EERF 365
++V+F + A ++L+ R+F G+ +RATF + EE+F
Sbjct: 485 -VYVRFGTAIDALAAQLNLNKRWFAGKTIRATFMNVQVYEEKF 526
>gi|413934153|gb|AFW68704.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
gi|413934154|gb|AFW68705.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 536
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 274 PTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT LLL+NM P + D ++ D+V EC+K+G V + + + T A +
Sbjct: 441 PTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNT--------AGFV 492
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++QF+ KA L GR+F G+++ ATF ++ +S
Sbjct: 493 YLQFDSVTAAGKAQQALHGRWFAGKMITATFMSDQEYS 530
>gi|357623461|gb|EHJ74600.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Danaus
plexippus]
Length = 350
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
GP T VL L NMV P E+ DE E +++ EC KYG V + EI P V
Sbjct: 248 GPATEVLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGCVRSI---EIPRPIEGVEVPG 304
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 305 CGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRREF 350
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 274 PTRVLLLRNMVGPGEV-DDE----LEDEVGSECAKYGTVTRVLIFEITEPNF--PVDEAV 326
P+ VL + NMV E+ DDE L ++V EC ++G VT + EI P V
Sbjct: 496 PSAVLKMANMVSIDELRDDEEYADLAEDVEEECKRFGGVTGM---EIPRPKDGEEVPGLG 552
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
I+V+F + E AL L+GR FGG +V+ T++ ++F KNEL
Sbjct: 553 CIYVRFGKEEDAVSALKALNGRKFGGNIVKVTYFPVDKFEKNEL 596
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
TR +LL NM P E D +L D+V ECA KYG VT + I + D I
Sbjct: 489 TRSVLLLNMFDPDEETEPDWDKDLADDVKGECASKYGPVTALKIEK--------DSQGEI 540
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+VQFE + KA+ L+GR+FGGR V A F
Sbjct: 541 YVQFESVDSAKKAVDSLNGRWFGGRQVNARF 571
>gi|358059688|dbj|GAA94557.1| hypothetical protein E5Q_01209 [Mixia osmundae IAM 14324]
Length = 564
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 273 PPTRVLLLRNMVGPGE-VDDE----LEDEVGSECAKYGTVTRVLI-----FEITEPNFPV 322
P TR L + NMV P E VDD+ + +++ EC+KYG V V I E +
Sbjct: 457 PATRCLQMLNMVTPEELVDDQDYADINEDIKDECSKYGEVIDVKIPRPIKTENGRMDVKA 516
Query: 323 DEAV----RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
E+V +IFV F+ +E + KA+ + GR FGGR+V + EE F
Sbjct: 517 SESVEHLGKIFVMFDSTESSKKAIDAIAGRQFGGRLVICAYEKEETF 563
>gi|148676069|gb|EDL08016.1| RNA binding motif protein 17, isoform CRA_a [Mus musculus]
Length = 316
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 106/266 (39%), Gaps = 88/266 (33%)
Query: 78 PDDAAALPQPALVGVTSTVI-----EEYDPARPNDYEDYRREKKKKAVDAEIRRELERRR 132
P AA L P G ++ + +EYDP PNDYE K+ + R+ R+
Sbjct: 76 PHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVV----KRQREERQRQRELERQ 131
Query: 133 QEGEERERREREERENASASRL------------------NMSG---------------- 158
+E EERE+R ++ E + SR +M G
Sbjct: 132 KEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEL 191
Query: 159 ------EEAWKRRAAMSSGGVPP---------RSPSPPPVNVESGGGGGGFTIGKSETSG 203
EE + R+ S +PP RSP+ P + + GG
Sbjct: 192 PRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTGPSNSFLANMGG------------ 239
Query: 204 LGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV--NASENKS 261
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+ +A+E
Sbjct: 240 ---------TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGE 290
Query: 262 EKKVKSVNFNGP-------PTRVLLL 280
+ + + P PT+V+LL
Sbjct: 291 AQDASKKSDSNPLTEILKCPTKVVLL 316
>gi|367020820|ref|XP_003659695.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
gi|347006962|gb|AEO54450.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
Length = 567
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+RVL L NMV P E+ D E+ ++V EC K+G ++L +I P ++
Sbjct: 467 SRVLQLLNMVTPEELMDNDDYEEIREDVQEECQKFG---KILSLKIPRPVGGSRQSAGVG 523
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+I++++E +E TKAL L GR F R V T++ EE F N
Sbjct: 524 KIYIKYETAESATKALRALAGRKFADRTVVTTYFPEENFDVN 565
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R +LLRNM P E + ELED+V +EC KYG V + +
Sbjct: 450 KTEPKPLPVNVN-MASRCVLLRNMFDPAEEEGEAWIKELEDDVRAECEEKYGHVVHISL- 507
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 508 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRFFGGRQISA 544
>gi|328766440|gb|EGF76494.1| hypothetical protein BATDEDRAFT_21058 [Batrachochytrium
dendrobatidis JAM81]
Length = 551
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 16/106 (15%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPV----DEA 325
TRVLLL NMV ++ D++ +D ++ EC K+GT I +I P PV +
Sbjct: 452 TRVLLLLNMVVSEDLVSDEDYQDILLDIQEECEKFGT-----ILDIAIPR-PVSGQSNAG 505
Query: 326 V-RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F+ +Q+ A L GR F RVV A+F+DE++F + +
Sbjct: 506 VGKIFVKFDNVKQSASAQHALAGRKFADRVVIASFFDEDKFDQQDF 551
>gi|71029064|ref|XP_764175.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351129|gb|EAN31892.1| hypothetical protein TP04_0540 [Theileria parva]
Length = 486
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPV-DEAVRIFVQFE 333
+ V+++ NMV P D+ L +EV EC KYGTVT V + +F ++ + +FV F
Sbjct: 394 SNVIVIYNMVDPKLADENLANEVKVECNKYGTVTSVYL------HFSANNDTLSVFVVFN 447
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
E A+ L+ R+F GR + YD +
Sbjct: 448 TPEDADNAVRALNTRWFNGRQIMCKTYDASAY 479
>gi|159123253|gb|EDP48373.1| splicing factor u2af large subunit [Aspergillus fumigatus A1163]
Length = 567
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+RVL L NMV P E+ D E+ D+V EC KYG +VL ++ P+ ++
Sbjct: 467 SRVLQLLNMVTPEELLDNDDYEEICDDVREECFKYG---KVLDLKVPRPSGGSRQSPGVG 523
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+I+V+F+ E T AL L GR F R V T++ EE F N
Sbjct: 524 KIYVKFDTVEAATNALKALAGRKFSDRTVVTTYFSEENFDVN 565
>gi|146324846|ref|XP_748978.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
gi|129556630|gb|EAL86940.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
Length = 563
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+RVL L NMV P E+ D E+ D+V EC KYG +VL ++ P+ ++
Sbjct: 463 SRVLQLLNMVTPEELLDNDDYEEICDDVREECFKYG---KVLDLKVPRPSGGSRQSPGVG 519
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
+I+V+F+ E T AL L GR F R V T++ EE F N
Sbjct: 520 KIYVKFDTVEAATNALKALAGRKFSDRTVVTTYFSEENFDVN 561
>gi|296811258|ref|XP_002845967.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843355|gb|EEQ33017.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 557
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ ++V EC+KYG V + +I P+ +A +
Sbjct: 458 RVLQLLNMVTADELIDNDDYEEICEDVQDECSKYGVVEEL---KIPRPSGGSRQAAGVGK 514
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
I+V+F+ +E TKAL L GR F R V T++ EE F N
Sbjct: 515 IYVKFDTAESATKALQALAGRKFQDRTVVTTYFSEENFEVN 555
>gi|260800970|ref|XP_002595369.1| hypothetical protein BRAFLDRAFT_113856 [Branchiostoma floridae]
gi|229280615|gb|EEN51381.1| hypothetical protein BRAFLDRAFT_113856 [Branchiostoma floridae]
Length = 524
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 272 GPPTRVLLLRNMVGP------GEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
GPPT VL L NMV P E +D LED V EC KYG V V EI P VD
Sbjct: 421 GPPTEVLCLMNMVMPEELMDEEEYEDILED-VREECGKYGAVLSV---EIPRPIEGVDVP 476
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+I+V+F KA L GR F R+V ++YD +++ + +
Sbjct: 477 GCGKIYVEFRSIMDCQKAQQALTGRKFAQRIVVTSYYDPDKYHRRDF 523
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+ +LL+NM P + + +++++V EC+KYG V + + + ++
Sbjct: 500 SAFMLLKNMFDPAQETEPNFHLDIQEDVTEECSKYGKVLQCHVVRDSPSGL-------VY 552
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++FE SE KA+ L+GR+F G+V+ A F DE F+
Sbjct: 553 LRFESSEGAAKAIQALNGRWFAGKVISAEFIDENTFA 589
>gi|67541022|ref|XP_664285.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
gi|40738434|gb|EAA57624.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
Length = 624
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+RVL L NMV P E+ D E+ D+V EC+K+G RVL +I P ++
Sbjct: 447 SRVLQLLNMVTPEELMDNEDYEEICDDVRDECSKFG---RVLELKIPRPTGGSRQSPGVG 503
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
+IFV+FE E TT AL L GR F R V T++ E
Sbjct: 504 KIFVKFETIEATTAALKSLAGRKFSDRTVVTTYFSE 539
>gi|345480698|ref|XP_001604333.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Nasonia
vitripennis]
Length = 455
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
V +GPPT VL L NMV P E+ D LED + EC KYG V V EI P
Sbjct: 349 VGTSGPPTEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEG 404
Query: 322 VDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VD ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 405 VDVPGCGKVFVEFNSVLDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 455
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R ++L+NM P E D ELED+V +E KYG V + +
Sbjct: 458 KTETKALPVNVN-MASRCVVLKNMFDPTEEDGENWEKELEDDVRAEAEEKYGHVVHIAL- 515
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F+R + A+ L+GR+FGGR++ AT
Sbjct: 516 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRYFGGRMISAT 553
>gi|224034337|gb|ACN36244.1| unknown [Zea mays]
Length = 410
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 274 PTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT LLL+NM P + D ++ D+V EC+K+G V + + + T A +
Sbjct: 315 PTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNT--------AGFV 366
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++QF+ KA L GR+F G+++ ATF ++ +S
Sbjct: 367 YLQFDSVTAAGKAQQALHGRWFAGKMITATFMSDQEYS 404
>gi|45387787|ref|NP_991252.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
gi|41389016|gb|AAH65869.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
Length = 475
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEP--NF 320
+ G PT VL L NMV P E+ D E+ ++V EC+KYG V + EI P
Sbjct: 368 IQMGGIPTEVLCLMNMVAPEELIDDEEYEEIVEDVKEECSKYGQVKSI---EIPRPVDGL 424
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+ +IFV+F + KA+ L GR F RVV + D + + + +
Sbjct: 425 DIPGTGKIFVEFTSVYDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 474
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P E + ELED+V +EC KYG V + + +PN D I
Sbjct: 502 SRCVLLRNMFDPAEEEGDGWIKELEDDVRAECEEKYGHVVHIAL----DPNTQGD----I 553
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 554 YLKFDRVQGGENAIKGLNGRFFGGRQISA 582
>gi|226509668|ref|NP_001142242.1| uncharacterized protein LOC100274411 [Zea mays]
gi|194690874|gb|ACF79521.1| unknown [Zea mays]
gi|194707772|gb|ACF87970.1| unknown [Zea mays]
gi|414871307|tpg|DAA49864.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
gi|414871308|tpg|DAA49865.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 318
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 274 PTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT LLL+NM P + D ++ D+V EC+K+G V + + + + A +
Sbjct: 223 PTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDK--------NTAGFV 274
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++QF+ KA L GR+F G+++ ATF +S
Sbjct: 275 YLQFDSVTAAAKAQNALHGRWFAGKMITATFMSALEYS 312
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 17/97 (17%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNF 320
SVN +R +LLRNM P E + ELED+V +EC KYG V + + +PN
Sbjct: 481 SVNM---ASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIAL----DPNT 533
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 534 QGD----IYLKFDRVQGGENAIKGLNGRFFGGRQISA 566
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 17/97 (17%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNF 320
SVN +R +LLRNM P E + ELED+V +EC KYG V + + +PN
Sbjct: 482 SVNM---ASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIAL----DPNT 534
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 535 QGD----IYLKFDRVQGGENAIKGLNGRFFGGRQISA 567
>gi|115486373|ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|108864607|gb|ABA94914.2| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|222616290|gb|EEE52422.1| hypothetical protein OsJ_34542 [Oryza sativa Japonica Group]
Length = 574
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 232 RQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV-- 289
R QG + P + ++ + ++ + + +K + V PT+V+ L +V P E+
Sbjct: 433 RANQGASQP----RPEQESMLLHVQQQAQMQKLMFQVGGGALPTKVVCLTQVVSPDELRD 488
Query: 290 DDELEDEVGS---ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLD 346
D+E ED V E +YG + +V+I PV R+F++F E +TKA +
Sbjct: 489 DEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFLEFADVESSTKAKNGMH 548
Query: 347 GRFFGGRVVRATFYDEERFSKNEL 370
GR F V A FY E++F++ +
Sbjct: 549 GRKFANNQVVAVFYPEDKFAEGQY 572
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 17/97 (17%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNF 320
SVN +R +LLRNM P E + ELED+V +EC KYG V + + +PN
Sbjct: 480 SVNM---ASRCVLLRNMFDPAEEEGESWVKELEDDVRAECEDKYGHVVHIAL----DPNT 532
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 533 QGD----IYLKFDRVQGGENAIKGLNGRFFGGRQISA 565
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R ++L+NM P E D ELED+V +E KYG V + +
Sbjct: 458 KTETKALPVNVN-MASRCVVLKNMFDPTEEDGENWEKELEDDVRAEAEEKYGHVVHIAL- 515
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F+R + A+ L+GR+FGGR++ AT
Sbjct: 516 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRYFGGRMISAT 553
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 17/97 (17%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNF 320
SVN +R +LLRNM P E + ELED+V +EC KYG V + + +PN
Sbjct: 482 SVNM---ASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIAL----DPNT 534
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 535 QGD----IYLKFDRVQGGENAIKGLNGRFFGGRQISA 567
>gi|242039571|ref|XP_002467180.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
gi|241921034|gb|EER94178.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
Length = 535
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 274 PTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT LLL+NM P + D ++ D+V EC+K+G V + + + T A +
Sbjct: 440 PTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNT--------AGFV 491
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++QF+ KA L GR+F G+++ ATF + +S
Sbjct: 492 YLQFDSVAAAGKAQQALHGRWFAGKMITATFMSAQEYS 529
>gi|255080824|ref|XP_002503985.1| predicted protein [Micromonas sp. RCC299]
gi|226519252|gb|ACO65243.1| predicted protein [Micromonas sp. RCC299]
Length = 809
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 274 PTRVLLLRNMVGPGEVDD---------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
PTR L L+NM P ++ D ++ +EV ECAK+G VT + + ++ F
Sbjct: 710 PTRCLTLKNMFDPAQIGDGGEGDAWWVDIGEEVREECAKHGAVTHLAVDRHSQ-GF---- 764
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+FV+F E T A L R+FGGR+V F E+ +
Sbjct: 765 ---VFVKFATPEAATGARSTLHARWFGGRLVTCEFTAEDEY 802
>gi|240274521|gb|EER38037.1| RNA splicing factor [Ajellomyces capsulatus H143]
Length = 537
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 17/97 (17%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNF 320
SVN +R +LLRNM P E + ELED+V +EC KYG V + + +PN
Sbjct: 434 SVNM---ASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIAL----DPNT 486
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 487 QGD----IYLKFDRVQGGENAIKGLNGRFFGGRQISA 519
>gi|430812485|emb|CCJ30102.1| unnamed protein product [Pneumocystis jirovecii]
Length = 376
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 13/96 (13%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE------LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA 325
G ++V++L++M E++D+ L++++ EC+K G VT V++F++ EP E
Sbjct: 253 GRWSKVIILKHMFTLKELEDDITLIMDLKEDIWEECSKIGNVTNVVLFDL-EP-----EG 306
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V + V+F E + ++GR+FGG+VV A YD
Sbjct: 307 V-VSVRFSDEESALACVKMMNGRYFGGKVVEAQIYD 341
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPN 319
V S++ G P+ L+L+NM P + D +++++V EC+K+GTV + + +
Sbjct: 504 VPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDK----- 558
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+ A +F++FE ++ A L GR+F G+++ ATF
Sbjct: 559 ---NSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATF 595
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P E + ELED+V +EC KYG V + + +PN D I
Sbjct: 502 SRCVLLRNMFDPAEEEGDGWIKELEDDVRAECEEKYGHVVHIAL----DPNTQGD----I 553
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 554 YLKFDRVQGGENAIKGLNGRFFGGRQISA 582
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P E + ELED+V +EC KYG V + + +PN D I
Sbjct: 498 SRCVLLRNMFDPAEEEGDGWIKELEDDVRAECEEKYGHVVHIAL----DPNTQGD----I 549
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 550 YLKFDRVQGGENAIKGLNGRFFGGRQISA 578
>gi|171684585|ref|XP_001907234.1| hypothetical protein [Podospora anserina S mat+]
gi|170942253|emb|CAP67905.1| unnamed protein product [Podospora anserina S mat+]
Length = 585
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ D+V EC K+G ++L +I P ++ +
Sbjct: 486 RVLQLLNMVTADELMDNDDYEEIRDDVQEECEKFG---KILSLKIPRPVGGSRQSAGVGK 542
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
IF++FE E KAL L GR F R V T++ EE F N
Sbjct: 543 IFIKFENHEAANKALRALAGRKFADRTVVTTYFPEENFDVN 583
>gi|302762569|ref|XP_002964706.1| hypothetical protein SELMODRAFT_83723 [Selaginella moellendorffii]
gi|300166939|gb|EFJ33544.1| hypothetical protein SELMODRAFT_83723 [Selaginella moellendorffii]
Length = 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 13/86 (15%)
Query: 278 LLLRNMVGPGEVDDE------LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
++L+NM P E+ DE LE +VG EC+K GTV +V IFE P E V I V+
Sbjct: 378 VVLKNMFLPKEITDEPTLLSELETDVGIECSKIGTVEKVRIFE----RHP--EGV-IVVK 430
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRA 357
F+ E+ + +DGR+FGGR + A
Sbjct: 431 FKNREEGLSCIKLMDGRWFGGRQIEA 456
>gi|403223876|dbj|BAM42006.1| uncharacterized protein TOT_040000383 [Theileria orientalis strain
Shintoku]
Length = 478
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFER 334
+ V++++NM+ D+ L +EV EC KYG VT V + +F ++ + +FV F
Sbjct: 387 SNVIVIQNMIEASLADENLPNEVKEECNKYGLVTSVYL------HFSPNDTLSVFVVFNT 440
Query: 335 SEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
E A+ L+ R+F GR + YD +
Sbjct: 441 VEDAENAVRSLNTRWFNGRQLMCKLYDASAY 471
>gi|85000357|ref|XP_954897.1| snrnp splicing factor (U2AF) [Theileria annulata strain Ankara]
gi|65303043|emb|CAI75421.1| snrnp splicing factor (U2AF), putative [Theileria annulata]
Length = 486
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGP 273
+A + K G++ + QGI +P + + N S K+E
Sbjct: 291 SALESLPKQGYRVIMAIDAVTQGIISPQQIKTQ------LANCSLMKAE----------I 334
Query: 274 PTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEI----TEPNFPVDE 324
PTR LLL N+V E+DD+ E D++ EC YG V RV + + +E +
Sbjct: 335 PTRALLLSNLVSKEELDDDEEYVDIIDDIRCECELYGVVLRVELPRVPKGLSEEEMNSFD 394
Query: 325 AVRI---FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+ FV F + +KA LDGR FG R V A F+ E F
Sbjct: 395 PTSVGSGFVLFSTVDSASKARKVLDGRKFGQRTVHAHFFSELYF 438
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R +LLRNM P E + ELED+V +EC KYG V + +
Sbjct: 450 KTEPKPLPVNVN-MASRCVLLRNMFDPTEEEGESWIKELEDDVRAECEEKYGHVVHISL- 507
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 508 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRFFGGRQISA 544
>gi|84998398|ref|XP_953920.1| RNA binding protein [Theileria annulata]
gi|65304918|emb|CAI73243.1| RNA binding protein, putative [Theileria annulata]
Length = 338
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 37/177 (20%)
Query: 214 AAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASE--------------- 258
A +MM KMGWK GQGLG+ EQG+ TPL+A+ +++ +I+NA
Sbjct: 159 VALKMMEKMGWK-GQGLGKNEQGMVTPLVAKSIGKKSAIIINAPNKPVSVSIPNTNVSKG 217
Query: 259 -NKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-DELEDEVGSECAKYGTVTRVLI---- 312
N EK VN + + + G +VD DELE E+ +E +GT+ + +
Sbjct: 218 LNTMEKVEDEVNIDEKDLSRICIIIFKGNSKVDLDELE-EILTE---FGTIIDIKLLSEK 273
Query: 313 ----------FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+ F D ++ + ++E EQ+ + ++ + + V F
Sbjct: 274 MCDRLLQDQRYSEVVWKFRQDSSI-VVCEYETEEQSKRLFLEYNNKLLMESSVSILF 329
>gi|340506971|gb|EGR33003.1| u2 small nuclear ribonucleoprotein auxiliary factor 2, putative
[Ichthyophthirius multifiliis]
Length = 302
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 20/107 (18%)
Query: 274 PTRVLLLRNMVGPGE--VDDE---LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV-- 326
PT+VL+L+NM+ GE +D+E +E++V EC+K+G V + I P VD+
Sbjct: 191 PTQVLVLKNMINDGELIIDEEYKQIEEDVKDECSKHGKVVSIAI-----PRPSVDDVKAG 245
Query: 327 --------RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+I+V++E E +A L+GR F R V+ ++++ +++
Sbjct: 246 KEHVLGKGKIYVEYESIEAAREARRYLNGRLFSNRTVQVSYFNYQKY 292
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 17/97 (17%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNF 320
SVN +R +LLRNM P E + ELED+V +EC KYG V + + +PN
Sbjct: 492 SVNM---ASRCVLLRNMFDPTEEEGDSWVKELEDDVRAECEEKYGHVVHIAL----DPNA 544
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 545 QGD----IYLKFDRVQGGENAIKGLNGRFFGGRQITA 577
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 17/97 (17%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNF 320
SVN +R +LLRNM P E + ELED+V +EC KYG V + + +PN
Sbjct: 479 SVNM---ASRCVLLRNMFDPTEEEGDSWVKELEDDVRAECEEKYGHVVHIAL----DPNT 531
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 532 QGD----IYLKFDRVQGGENAIKGLNGRFFGGRQITA 564
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
+R ++L+NM P E + ELED+V EC AKYGTV + + +PN D I
Sbjct: 506 SRCVVLKNMFDPAEEEGESWMKELEDDVKEECQAKYGTVVHIAL----DPNTQGD----I 557
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+V+F+ + A+ L+GRFFGGR + A
Sbjct: 558 YVKFDTVQGGENAIKGLNGRFFGGRQITA 586
>gi|83765203|dbj|BAE55346.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 563
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV P E+ DE+ D+V ECAKYG V + I + + +IF
Sbjct: 459 SRVLQLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGKIF 518
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
V+F+ E TT AL L GR F R V T++ E
Sbjct: 519 VKFDSVESTTNALKALAGRKFSDRTVVTTYFSE 551
>gi|348555826|ref|XP_003463724.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Cavia porcellus]
Length = 564
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 301 CAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
K+G V RV+I++ E V+IFV+F + +T KA+ L+GR+F GR V A
Sbjct: 492 VGKFGAVNRVIIYQGKAGREEDAEIIVKIFVEFSMASETHKAIQALNGRWFAGRKVVAEV 551
Query: 360 YDEERFSKNELA 371
YD+ERF ++L+
Sbjct: 552 YDQERFDNSDLS 563
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 17/97 (17%)
Query: 267 SVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNF 320
SVN +R +LLRNM P E + ELED+V +EC KYG V + + +PN
Sbjct: 490 SVNM---ASRCVLLRNMFDPTEEEGDSWVKELEDDVRAECEEKYGHVVHIAL----DPNA 542
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
D I+++F+R + A+ L+GRFFGGR + A
Sbjct: 543 QGD----IYLKFDRVQGGENAIKGLNGRFFGGRQITA 575
>gi|302756421|ref|XP_002961634.1| hypothetical protein SELMODRAFT_77296 [Selaginella moellendorffii]
gi|300170293|gb|EFJ36894.1| hypothetical protein SELMODRAFT_77296 [Selaginella moellendorffii]
Length = 489
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 13/86 (15%)
Query: 278 LLLRNMVGPGEVDDE------LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
++L+NM P E+ DE LE +VG EC+K GTV +V IFE P E V I V+
Sbjct: 378 VVLKNMFLPKEITDEPTLLSELETDVGIECSKIGTVEKVRIFE----RHP--EGV-IVVK 430
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRA 357
F+ E+ + +DGR+FGGR + A
Sbjct: 431 FKNREEGLSCIRLMDGRWFGGRQIEA 456
>gi|194704666|gb|ACF86417.1| unknown [Zea mays]
gi|414871304|tpg|DAA49861.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 537
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 274 PTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT LLL+NM P + D ++ D+V EC+K+G V + + + T A +
Sbjct: 442 PTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNT--------AGFV 493
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++QF+ KA L GR+F G+++ ATF +S
Sbjct: 494 YLQFDSVTAAAKAQNALHGRWFAGKMITATFMSALEYS 531
>gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
Length = 574
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 232 RQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV-- 289
R QG + P + ++ + ++ + + +K + V PT+V+ L ++ P E+
Sbjct: 433 RANQGASQP----RPEQESMLLHVQQQAQMQKLMFQVGGGALPTKVVCLTQVISPDELRD 488
Query: 290 DDELEDEVGS---ECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLD 346
D+E ED V E +YG + +V+I PV R+F++F E +TKA +
Sbjct: 489 DEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFLEFADIESSTKAKNGMH 548
Query: 347 GRFFGGRVVRATFYDEERFSKNEL 370
GR F V A FY E++F++ +
Sbjct: 549 GRKFANNQVVAVFYPEDKFAEGQY 572
>gi|357470349|ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355506514|gb|AES87656.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 634
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV-RI 328
T+V+ L N V P E+ + E+ D++ EC+K+G++ V+I +P+ + V ++
Sbjct: 532 TKVVCLTNAVAPEELKEDEDFEEIIDDMRQECSKFGSLVNVVIPR-PQPDGDLSGGVGKV 590
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ E TKA L+GR FGG V A FY E +F++ +
Sbjct: 591 FLEYVDIEGATKARTGLNGRKFGGNEVIAVFYSENKFAQGD 631
>gi|315044445|ref|XP_003171598.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|311343941|gb|EFR03144.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
Length = 565
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ ++V EC+KYG V + +I P+ +A +
Sbjct: 466 RVLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEEL---KIPRPSAGSRQAAGVGK 522
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
I+++F+ E TKAL L GR F R V T++ EE F N
Sbjct: 523 IYIKFDTPESATKALQALAGRKFQDRTVVTTYFSEENFEVN 563
>gi|391337926|ref|XP_003743315.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Metaseiulus
occidentalis]
Length = 430
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 271 NGPPTRVLLLRNMVGPGEV------DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
+GP T VL L N+V P E+ DD LED + EC KYG V + EI P VD
Sbjct: 327 SGPATEVLCLMNLVTPDELRDEEEYDDILED-IQDECNKYGHVKSI---EIPRPIQGVDV 382
Query: 325 --AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV ++++ +++ + +
Sbjct: 383 PGVGKVFVEFNSVADCQKAQQALTGRKFSNRVVVTSYFEPDKYHRRQF 430
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P E + ELED+V +EC KYG V + + +PN D I
Sbjct: 464 SRCVLLRNMFDPAEEEGENWVKELEDDVRAECEEKYGHVVHISV----DPNTQGD----I 515
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++FER A+ L+GR+FGGR + A
Sbjct: 516 YLKFERVSGGENAIKGLNGRYFGGRQISA 544
>gi|357155772|ref|XP_003577233.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 446
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYGT+ +V+I PV ++
Sbjct: 343 PTKVICLTQVVTADELKDDEEYEDIMEDMRLEAGKYGTLVKVVIPRPHPSGEPVAGVGKV 402
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F+++ + +TKA + GR FGG V A FY E +FS E
Sbjct: 403 FLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFSDEEF 444
>gi|308809429|ref|XP_003082024.1| splicing factor (ISS) [Ostreococcus tauri]
gi|116060491|emb|CAL55827.1| splicing factor (ISS) [Ostreococcus tauri]
Length = 311
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 275 TRVLLLRNMVG-----PGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T L L NMV G +L+ +V EC+K G V RV + + + + R+F
Sbjct: 207 TEYLCLENMVDIAVLRSGRERKDLQYDVEDECSKCGRVVRVFVQSPRDEDIKQNTVSRVF 266
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
VQFER+ + A + GR FGGR V A + + F +
Sbjct: 267 VQFERTSSSESAYKMMQGRTFGGRTVTARYMNATEFDR 304
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P + + ELED+V +EC KYG V + + +PN D I
Sbjct: 494 SRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL----DPNTQGD----I 545
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 546 YLKFDRVQGGENAIKGLNGRFFGGRQISA 574
>gi|327297188|ref|XP_003233288.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
gi|326464594|gb|EGD90047.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
Length = 563
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ ++V EC+KYG V + +I P+ +A +
Sbjct: 457 RVLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEEL---KIPRPSAGSRQAAGVGK 513
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
I+V+F+ E TKAL L GR F R V T++ E S + L P
Sbjct: 514 IYVKFDTPESATKALQALAGRKFQDRTVVTTYFSEASHSNSNLCP 558
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
T+VL L + V P E+ D E+ D++ EC+K+G + ++ I P P E
Sbjct: 522 TKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNICNLVNVVIPRPR-PDGELCPGV 580
Query: 327 -RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
++F+++ + +TKA L+GR FGG V A FY E +F++ +
Sbjct: 581 GKVFLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENKFAQGD 624
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
T+VL L + V P E+ D E+ D++ EC+K+G + ++ I P P E
Sbjct: 524 TKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNICNLVNVVIPRPR-PDGELCPGV 582
Query: 327 -RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
++F+++ + +TKA L+GR FGG V A FY E +F++ +
Sbjct: 583 GKVFLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENKFAQGD 626
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P + + ELED+V +EC KYG V + + +PN D I
Sbjct: 494 SRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL----DPNTQGD----I 545
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 546 YLKFDRVQGGENAIKGLNGRFFGGRQISA 574
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P + + ELED+V +EC KYG V + + +PN D I
Sbjct: 497 SRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL----DPNTQGD----I 548
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 549 YLKFDRVQGGENAIKGLNGRFFGGRQISA 577
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPN 319
V S++ G P+ L+L+NM P + D +++++V EC+K+GTV + + +
Sbjct: 322 VPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDK----- 376
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+ A +F++FE ++ A L GR+F G+++ ATF
Sbjct: 377 ---NSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATF 413
>gi|147902896|ref|NP_001080595.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus laevis]
gi|111185517|gb|AAH44032.2| U2af2 protein [Xenopus laevis]
Length = 456
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEV--DDELE---DEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ DDE E ++V EC KYG V + EI P
Sbjct: 349 VQMGGHPTEVLCLMNMVVPEELIDDDEYEEIVEDVRDECGKYGAVKSI---EIPRPVDGV 405
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 406 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDGYHRRDF 455
>gi|384253302|gb|EIE26777.1| hypothetical protein COCSUDRAFT_64653 [Coccomyxa subellipsoidea
C-169]
Length = 472
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 274 PTRVLLLRNMVGPGEVDDE-------LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
PTRV+LL+NM+ ++ DE L ++V EC KYGTV + + P DE
Sbjct: 213 PTRVVLLKNMLKALQLLDEAERTDASLMEDVKEECGKYGTVEGIAVPR-PPPTVAADEPS 271
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
R++V+F +++++ +GR F G + A F E+ F++
Sbjct: 272 RVYVKFGTPDESSRVKEAFNGRQFDGNSITAAFASEDDFNQ 312
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P + + ELED+V +EC KYG V + + +PN D I
Sbjct: 462 SRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL----DPNTQGD----I 513
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 514 YLKFDRVQGGENAIKGLNGRFFGGRQISA 542
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P + + ELED+V +EC KYG V + + +PN D I
Sbjct: 494 SRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL----DPNTQGD----I 545
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 546 YLKFDRVQGGENAIKGLNGRFFGGRQISA 574
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P + + ELED+V +EC KYG V + + +PN D I
Sbjct: 491 SRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL----DPNTQGD----I 542
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 543 YLKFDRVQGGENAIKGLNGRFFGGRQISA 571
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P + + ELED+V +EC KYG V + + +PN D I
Sbjct: 496 SRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL----DPNTQGD----I 547
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++F+R + A+ L+GRFFGGR + A
Sbjct: 548 YLKFDRVQGGENAIKGLNGRFFGGRQISA 576
>gi|47575746|ref|NP_001001217.1| U2 small nuclear RNA auxiliary factor 2 isoform 2 [Xenopus
(Silurana) tropicalis]
gi|45709722|gb|AAH67966.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
[Xenopus (Silurana) tropicalis]
Length = 456
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ DDE E+ +V EC KYG V + EI P
Sbjct: 349 VQMGGHPTEVLCLMNMVLPEELLDDDEYEEIVEDVRDECGKYGAVKSI---EIPRPVDGV 405
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 406 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDGYHRRDF 455
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 272 GPPTRVLLLRNMVGPGE-----VDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+ LLL+NM P D ++ D+V EC+++G + + + + A
Sbjct: 464 GTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV--------DRNSAG 515
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
++++FE+SE +A L+GR+F G+++ ATF D
Sbjct: 516 FVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMD 550
>gi|62859443|ref|NP_001016998.1| U2 small nuclear RNA auxiliary factor 2 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|89269799|emb|CAJ83531.1| U2 (RNU2) small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
gi|115292148|gb|AAI22001.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
Length = 465
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ DDE E+ +V EC KYG V + EI P
Sbjct: 358 VQMGGHPTEVLCLMNMVLPEELLDDDEYEEIVEDVRDECGKYGAVKSI---EIPRPVDGV 414
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 415 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDGYHRRDF 464
>gi|348688506|gb|EGZ28320.1| hypothetical protein PHYSODRAFT_309221 [Phytophthora sojae]
Length = 694
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 272 GPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+RV++L NMV P E++D ++ D++ EC ++G V +L+ P + AV
Sbjct: 592 GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLL---PRPRDGIPSAV 648
Query: 327 -RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
++FV+F + A +L GR F R V F DE ++++ ELA
Sbjct: 649 GKVFVEFGDVQSAQSAATELHGRGFSNRTVAVEFMDEGKYARRELA 694
>gi|340924261|gb|EGS19164.1| hypothetical protein CTHT_0057890 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 409
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 15/134 (11%)
Query: 242 MARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDE------LED 295
+ RKT + A + + S+++S K++ RV++LRNM E+ D+ +++
Sbjct: 267 IIRKTQKLASKLADWSDDESHA-AKTLQPPKKWERVVILRNMFTLEELRDDPTAILDIKE 325
Query: 296 EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVV 355
+V EC K G VT V+++++ E + V+F+ E + L + GR FGGR++
Sbjct: 326 DVREECEKLGPVTNVVLYDLEEEGI-------VTVKFKTREAAEECLRLMHGRAFGGRII 378
Query: 356 RATFYD-EERFSKN 368
A F ERF K+
Sbjct: 379 EAYFATGRERFRKS 392
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGE-----VDDELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R ++L+NM P E + ELED+V +E KYG V + +
Sbjct: 475 KTEAKALPVNVN-MASRCVVLKNMFDPAEEEGDSWEKELEDDVRAEAEEKYGHVVHISL- 532
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F+R + A+ L+GR+FGGR++ AT
Sbjct: 533 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRYFGGRMISAT 570
>gi|125532099|gb|EAY78664.1| hypothetical protein OsI_33765 [Oryza sativa Indica Group]
Length = 549
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT LLL+NM P + D +++D+V EC+K+G V + + + T A
Sbjct: 453 GSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNT--------AG 504
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++ F+ T A L GR+F G+++ ATF +++
Sbjct: 505 FVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQY 543
>gi|78708721|gb|ABB47696.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215695222|dbj|BAG90413.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 320
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT LLL+NM P + D +++D+V EC+K+G V + + + + A
Sbjct: 224 GSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDK--------NTAG 275
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++ F+ T A L GR+F G+++ ATF +++
Sbjct: 276 FVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQY 314
>gi|323451094|gb|EGB06972.1| hypothetical protein AURANDRAFT_9578, partial [Aureococcus
anophagefferens]
Length = 64
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 278 LLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQ 337
LLL+NMV P E+D E E SEC KYG V +F P+ P DEAVR+F+ F +
Sbjct: 1 LLLKNMVAPDEMDAEFRKETRSECGKYGAVEADDVF--LAPHAPEDEAVRVFLAFSEKKH 58
Query: 338 TTKALI 343
+A +
Sbjct: 59 AIRAFL 64
>gi|448118323|ref|XP_004203467.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|448120732|ref|XP_004204050.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384335|emb|CCE79039.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384918|emb|CCE78453.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
Length = 581
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 273 PPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLI-------FEITEPNF 320
P + V+ L N V P E+ D+ E +++ +E +KYG V V + ++I+ +
Sbjct: 472 PKSNVIQLINAVSPREIRDKAEFEFIINDIVNEVSKYGRVKSVKVPQPSSEYYQISLSDL 531
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
P RIF++ E + A++ L GR + RVV F+D + KNEL
Sbjct: 532 PEPHVGRIFIELEDEDSALNAIMKLAGRLYNDRVVVCAFFDYNDY-KNEL 580
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYG + +V+I PV ++
Sbjct: 445 PTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKV 504
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + TKA + GR FGG V A FY E +FS E
Sbjct: 505 FLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPENKFSSAE 545
>gi|378731414|gb|EHY57873.1| U2AF domain-containing protein (UHM) kinase 1 [Exophiala
dermatitidis NIH/UT8656]
Length = 574
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV P ++ D E+ ++V EC+KYG ++L +I P+ ++ +
Sbjct: 476 RVLQLLNMVTPEDLMDNDDYEEICEDVMEECSKYG---KILSMKIPRPSGGSRQSAGVGK 532
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
IF+++E +E KAL L GR F R V T++DE F
Sbjct: 533 IFLKYEDAESAKKALQALAGRKFADRTVVTTYFDEVCF 570
>gi|405976087|gb|EKC40607.1| Splicing factor U2AF 50 kDa subunit [Crassostrea gigas]
Length = 428
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 248 RRAGVIVNASENKSEKKVKSVNFN---GPPTRVLLLRNMVGP-----GEVDDELEDEVGS 299
+RA + S+ + ++ +N N GPPT VL L NM+ P E +++ ++V
Sbjct: 299 QRASLGAKNSQVPVQLQIPGLNLNQGAGPPTEVLCLMNMIVPEELEDEEEYEDILEDVKE 358
Query: 300 ECAKYGTVTRVLIFEITEPNFPVDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
EC+KYG V + EI P VD +IFV+F KA L GR F RVV
Sbjct: 359 ECSKYGVVRSI---EIPRPIKGVDVPGCGKIFVEFNSIIDCQKAQQALTGRKFSNRVVVT 415
Query: 358 TFYDEERFSKNEL 370
++YD +++ + E
Sbjct: 416 SYYDPDKYHRREF 428
>gi|324503285|gb|ADY41429.1| Splicing factor U2AF 65 kDa subunit [Ascaris suum]
Length = 522
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 272 GPPTRVLLLRNMV------GPGEVDDELEDEVGSECAKYGTVTRVLIFEI--TEPNFPVD 323
GPPT VL L NMV E +D LED + ECAKYG V + E+ + P V
Sbjct: 420 GPPTEVLCLMNMVTEEELKEDEEYEDILED-IREECAKYGFVKSI---EVPRSIPGVDVT 475
Query: 324 EAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F ++ KA L GR F R V ++YD + + + +
Sbjct: 476 GVGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDLYHRRQF 522
>gi|327265725|ref|XP_003217658.1| PREDICTED: RNA-binding protein 6-like [Anolis carolinensis]
Length = 1144
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 60/142 (42%), Gaps = 23/142 (16%)
Query: 121 DAEIRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSP 180
+ EI R+++R QE ERRERE + S RR P R
Sbjct: 1005 NLEIHRKIKRSEQELAYLERREREGKFKEKGS----------DRREKFEERDSPERKRPR 1054
Query: 181 PPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTP 240
P N +SG GK E S G RMM MGWKEG GLGR EQG+T+P
Sbjct: 1055 PFKNSDSGYKPA---TGKMENSNKG----------SRMMQAMGWKEGSGLGRNEQGMTSP 1101
Query: 241 LMARKTDRRAGVIVNASENKSE 262
+ R AG+ N+ +
Sbjct: 1102 VEPENRKRGAGLGTQGRPNRRQ 1123
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 275 TRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEPN-FPVDEAV-- 326
+R+LL+ NMV P ++ D+ L ++V EC+ YG V + I P+ +DEA
Sbjct: 252 SRILLMLNMVTPDDLTDDQEYGDLYEDVKEECSNYGAVEDL---RIPRPDAVRLDEASGV 308
Query: 327 -RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
R++V+++ SE T AL +L GR F GR + AT E+
Sbjct: 309 GRVYVKYKDSESATAALNNLAGRSFAGRSIIATLLSED 346
>gi|78708720|gb|ABB47695.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215765085|dbj|BAG86782.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 339
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT LLL+NM P + D +++D+V EC+K+G V + + + + A
Sbjct: 243 GSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDK--------NTAG 294
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++ F+ T A L GR+F G+++ ATF +++
Sbjct: 295 FVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQY 333
>gi|326427574|gb|EGD73144.1| hypothetical protein PTSG_04857 [Salpingoeca sp. ATCC 50818]
Length = 2295
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 277 VLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSE 336
V+ L NMV +VD LEDE+ EC K+G +++ D +IFV+F +
Sbjct: 2192 VIQLSNMVTAKDVDATLEDEIRMECIKHG---------VSQARPHPDSLAKIFVKFTTPQ 2242
Query: 337 QTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGE 376
A+ L+GR+F GRVV A ER S+ L GE
Sbjct: 2243 SAGAAIDALNGRYFDGRVVAA-----ERVSEKTLQQFLGE 2277
>gi|326523595|dbj|BAJ92968.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT LLL+NM P + D ++ D+V EC+K+G V + + + T A
Sbjct: 491 GTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQEECSKFGVVKHIFVDKHT--------AG 542
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++ F+ + A L GR+F G+++ ATF ++
Sbjct: 543 FVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQY 581
>gi|326494786|dbj|BAJ94512.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT LLL+NM P + D ++ D+V EC+K+G V + + + T A
Sbjct: 491 GTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQEECSKFGVVKHIFVDKHT--------AG 542
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++ F+ + A L GR+F G+++ ATF ++
Sbjct: 543 FVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQY 581
>gi|392871394|gb|EAS33305.2| G-patch DNA repair protein [Coccidioides immitis RS]
Length = 528
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMAR--KTDRR-----AGVIVNASENK-- 260
GQ A+R+++K GW +G GLG GI PL + K +R G A K
Sbjct: 361 GQKGFAERLLSKYGWTKGSGLGASGTGIVNPLQVKVQKQKKRPDAEGGGFATPAGRGKII 420
Query: 261 --SEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDELE--------DEVGSECA-KYGTVTR 309
+KK + F G + V++L M+ ++D ELE E+G EC KYG V R
Sbjct: 421 GGHQKKQEEGKF-GAMSEVVVLHGMLDGMDLDAELEAGDDGGLMQEIGDECGEKYGRVER 479
Query: 310 VLIFEITEPNFPVDEAVRIFVQF 332
V I + PV FV+F
Sbjct: 480 VFIDRSAKGQVPV------FVKF 496
>gi|402073699|gb|EJT69251.1| splicing factor U2AF 50 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 623
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+RVL L NMV E+ D E+ D+V EC+K+GT+ L +I P+ +
Sbjct: 523 SRVLQLLNMVTADELLDNDDYEEICDDVREECSKFGTI---LELKIPRPSGGARQLAGVG 579
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+I+V+F+ E +T+AL L GR F R V T++ EE F
Sbjct: 580 KIYVKFDTIESSTEALKALAGRKFADRTVVTTYFPEENF 618
>gi|326504734|dbj|BAK06658.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT LLL+NM P + D ++ D+V EC+K+G V + + + T A
Sbjct: 491 GTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQEECSKFGVVKHIFVDKHT--------AG 542
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++ F+ + A L GR+F G+++ ATF ++
Sbjct: 543 FVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQY 581
>gi|193848546|gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
Length = 569
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYGT+ +V+I PV ++
Sbjct: 466 PTKVICLTQVVTADELKDDEEYEDIMEDMRLEAGKYGTLVKVVIPRPHPSGEPVAGVGKV 525
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F+++ + +TKA + GR FGG V A FY E +FS E
Sbjct: 526 FLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFSDEEF 567
>gi|348676634|gb|EGZ16451.1| hypothetical protein PHYSODRAFT_314245 [Phytophthora sojae]
Length = 449
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 271 NGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
+G L L N+V GEVD+ELEDEV EC K+G V +V I E+ + VR+FV
Sbjct: 352 DGDDKCCLCLMNLVNRGEVDEELEDEVRGECGKFGNVNKVEIHELADH-------VRVFV 404
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFY 360
F+ + +KA L GRFFGG V+A +Y
Sbjct: 405 LFDEAFGASKAKQALHGRFFGGNQVQAHYY 434
>gi|194756144|ref|XP_001960339.1| GF13310 [Drosophila ananassae]
gi|190621637|gb|EDV37161.1| GF13310 [Drosophila ananassae]
Length = 434
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 274 PTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFE-ITEPNFPVDEAVR 327
PT VL L NMV P E+ D+ + ++ ECAKYG V + I I + + P +
Sbjct: 331 PTEVLCLLNMVLPEELLDDEEYEDIRTDIQQECAKYGDVRSLKIPRPIPKGDSPKRGCGK 390
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+FVQFE + KA+ L GR F GR+V +F D +++ ++
Sbjct: 391 VFVQFESVDDCQKAMRALSGRKFSGRIVMTSFSDPDKYLADDF 433
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 278 LLLRNMVGPGE-----VDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
LLL+NM P E D +L ++V EC AKYG VT + + + D A ++V
Sbjct: 588 LLLKNMFNPAEETEQGWDKDLAEDVKDECHAKYGAVTSIHVEK--------DSAGEVYVT 639
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATF 359
F + + KAL L+GRFFGG+ + A +
Sbjct: 640 FANLDGSRKALEGLNGRFFGGKPISAQY 667
>gi|241166827|ref|XP_002409934.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
gi|215494685|gb|EEC04326.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
Length = 444
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 272 GPPTRVLLLRNMVGP------GEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE- 324
GPPT VL L N+V P E +D LED + EC KYG V + EI P VD
Sbjct: 342 GPPTEVLCLMNLVCPEELKDEEEYEDILED-IHEECNKYGVVKSI---EIPRPIEGVDVP 397
Query: 325 -AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+ FV+F KA L GR F RVV +++D +++ + E
Sbjct: 398 GCGKAFVEFNSVIDCQKAQQSLTGRKFSNRVVVTSYFDPDKYHRREF 444
>gi|301117646|ref|XP_002906551.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262107900|gb|EEY65952.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 569
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 272 GPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+RV++L NMV P E++D ++ D++ EC ++G V +L+ P V AV
Sbjct: 467 GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLL---PRPRDGVLSAV 523
Query: 327 -RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
++FV+F + A +L GR F R V F DE ++++ E++
Sbjct: 524 GKVFVEFADVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARREIS 569
>gi|346978171|gb|EGY21623.1| splicing factor U2AF 50 kDa subunit [Verticillium dahliae VdLs.17]
Length = 589
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ ++V ECAKYGTV V + + +IF
Sbjct: 464 SRVLQLLNMVTADELMDNEDYEEIVEDVQEECAKYGTVLEVKVPRPVGGSRQSAGVGKIF 523
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
V++E E T KAL L GR F R V T++ E
Sbjct: 524 VKYETKEATKKALQSLAGRKFADRTVVTTYFPE 556
>gi|115486631|ref|NP_001068459.1| Os11g0682300 [Oryza sativa Japonica Group]
gi|113645681|dbj|BAF28822.1| Os11g0682300, partial [Oryza sativa Japonica Group]
Length = 378
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYG + +V+I PV ++
Sbjct: 275 PTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKV 334
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + TKA + GR FGG V A FY E +FS E
Sbjct: 335 FLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPENKFSSAE 375
>gi|358391563|gb|EHK40967.1| hypothetical protein TRIATDRAFT_135674 [Trichoderma atroviride IMI
206040]
Length = 558
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+ V+ L NMV P E+ D E+ ++V ECAK+G +V+ ++ P+ ++
Sbjct: 458 SSVIQLLNMVTPEELIDNDDYEEICEDVQDECAKFG---KVVELKVPRPSGGSRQSAGVG 514
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+I+V+++ E TKAL L GR F R V AT++ EE F
Sbjct: 515 KIYVKYDSEESATKALTALAGRKFADRTVVATYFPEENF 553
>gi|330793087|ref|XP_003284617.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
gi|325085416|gb|EGC38823.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
Length = 829
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFV 330
G + L+LRN P ++D E+++ S C ++G + +++I D + VR+++
Sbjct: 737 GNENKCLVLRNAGSPDDIDPSFEEDIRSGCNEFGEIEKLVI--------KTDSSTVRVYI 788
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
F+ + L+G++F ++A FYD F+K
Sbjct: 789 VFKEAPSCVACQSKLNGKYFSYHCIKAEFYDINLFNK 825
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV-RI 328
T+VL L + V P E+ D E+ D++ EC+K+G + V+I P+ + V ++
Sbjct: 509 TKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPR-PRPDGELCPGVGKV 567
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + +TKA L+GR FGG V A FY E +F++ +
Sbjct: 568 FLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENKFAQGD 608
>gi|108864648|gb|ABG22574.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 366
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYG + +V+I PV ++
Sbjct: 263 PTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKV 322
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + TKA + GR FGG V A FY E +FS E
Sbjct: 323 FLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPENKFSSAE 363
>gi|71996490|ref|NP_001022970.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
gi|351018337|emb|CCD62281.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
Length = 471
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T +L L NMV E+ DDE E+ +V EC+KYG V + EI P + PV
Sbjct: 369 GRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSL---EIPRPYEDHPVPG 425
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + +A L GR F R V ++YD +++ +
Sbjct: 426 VGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 471
>gi|71996475|ref|NP_001022967.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
gi|6226906|sp|P90978.2|U2AF2_CAEEL RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
gi|3334906|gb|AAC26982.1| splicing factor U2AF65 [Caenorhabditis elegans]
gi|351018334|emb|CCD62278.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
Length = 496
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T +L L NMV E+ DDE E+ +V EC+KYG V + EI P + PV
Sbjct: 394 GRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSL---EIPRPYEDHPVPG 450
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + +A L GR F R V ++YD +++ +
Sbjct: 451 VGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 496
>gi|71996485|ref|NP_001022969.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
gi|351018336|emb|CCD62280.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
Length = 474
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T +L L NMV E+ DDE E+ +V EC+KYG V + EI P + PV
Sbjct: 372 GRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSL---EIPRPYEDHPVPG 428
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + +A L GR F R V ++YD +++ +
Sbjct: 429 VGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 474
>gi|222612890|gb|EEE51022.1| hypothetical protein OsJ_31660 [Oryza sativa Japonica Group]
Length = 548
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G PT LLL+NM P + D +++D+V EC+K+G V + + + T A
Sbjct: 452 GSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNT--------AG 503
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++ F+ T A L GR+F G+++ ATF +++
Sbjct: 504 FVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQY 542
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LL+NM P E ELED+V +EC KYG V + + E N P D +
Sbjct: 395 SRCVLLKNMFNPQEESGDNWIRELEDDVKAECENKYGKVLHIHV----EENSPGD----V 446
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+++F+ +A+ L+GR+FGGR + A+F
Sbjct: 447 YIKFDNVVAGERAIQGLNGRWFGGRTISASF 477
>gi|301105717|ref|XP_002901942.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099280|gb|EEY57332.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 520
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 276 RVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
R++++++M P E++DE L++++ EC+K G VT++ +F VD V +
Sbjct: 332 RIVVIKHMFTPAEIEDEAYEKELQEDIHDECSKIGDVTKITLFAK-----HVDGVV--VI 384
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+F S + + + GRFF GR + F+D ++ +E
Sbjct: 385 KFASSGSAARCVDVMSGRFFAGRKLECGFWDGTDYTHHE 423
>gi|361132025|gb|EHL03640.1| putative Splicing factor U2AF 50 kDa subunit [Glarea lozoyensis
74030]
Length = 568
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
RVL L NMV P E+ D E+ ++V EC KYG V + + T + + +IFV
Sbjct: 469 RVLQLLNMVTPEELVDNDDYEEICEDVKEECEKYGKVLDMKVPRPTGGSRQSNGVGKIFV 528
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+F+ E KAL L GR F R V T++ EE F
Sbjct: 529 KFDTPESAGKALRALAGRKFADRTVVTTYFSEENF 563
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV-RI 328
T+VL L + V P E+ D E+ D++ EC+K+G + V+I P+ + V ++
Sbjct: 524 TKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPR-PRPDGELCPGVGKV 582
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + +TKA L+GR FGG V A FY E +F++ +
Sbjct: 583 FLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENKFAQGD 623
>gi|328862941|gb|EGG12041.1| hypothetical protein MELLADRAFT_41759 [Melampsora larici-populina
98AG31]
Length = 397
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 272 GPPTRVLLLRNMVGPGE-VDDE-----LEDEVGSECAKYGTVTRVLI-----FEITEPNF 320
G T+VL + NMV P E VDDE LED + EC+KYG + V I E +
Sbjct: 264 GERTKVLQMLNMVNPEELVDDEEYKEILED-IKEECSKYGQIEDVKIPRPAKNEKGRMDL 322
Query: 321 PVDEAV----RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
E++ ++F++FER E +AL + GR F GRV+ + E+
Sbjct: 323 KSSESIEGLGKVFIKFERIEDCAQALSAIAGRQFAGRVIICAYASED 369
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 25/181 (13%)
Query: 183 VNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLM 242
VN + GGG T G ++ GG + ++ + G GL + + +
Sbjct: 478 VNAKGSGGGSSHTNGSAQD----FQGGGHLP---QLTSSFDDGGGAGLNPERRAALMEKL 530
Query: 243 ARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGE-----VDDELEDEV 297
AR + ASE + + + + LLL+NM P E D +L ++V
Sbjct: 531 ARHNEPSPA----ASEATTTVQERPAGIPESTSTSLLLKNMFDPAEETEPNWDTDLAEDV 586
Query: 298 GSEC-AKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVR 356
EC AKYG VT + + + D A I+V F + + KAL L+GRFFGG+ +
Sbjct: 587 KEECQAKYGPVTSIHVEK--------DSAGEIYVTFANLDASRKALDGLNGRFFGGKPIS 638
Query: 357 A 357
A
Sbjct: 639 A 639
>gi|212539736|ref|XP_002150023.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067322|gb|EEA21414.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 551
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
TRVL L NMV E+ + E+ ++V EC+KYG +VL +I P ++
Sbjct: 451 TRVLQLLNMVTADELINNEDYEEILEDVQDECSKYG---QVLDLKIPRPAGGSRQSAGVG 507
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+IFV+F+ E T AL L GR F R V T++ EE F
Sbjct: 508 KIFVKFDTVESATNALKALAGRKFSDRTVVTTYFPEESF 546
>gi|380016747|ref|XP_003692335.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Apis florea]
Length = 428
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
V +GP T VL L NMV P E+ D LED + EC KYG V V EI P
Sbjct: 322 VGTSGPATEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEG 377
Query: 322 VDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VD ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 378 VDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 428
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYG + +V+I PV ++
Sbjct: 445 PTKVVCLTQVVSADELKDDEEYEDIMEDMRLESGKYGNLIKVVIPRPDPSGLPVAGVGKV 504
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + TKA + GR FGG V A FY E +F+ E
Sbjct: 505 FLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPENKFASAE 545
>gi|66520699|ref|XP_623055.1| PREDICTED: splicing factor U2AF 50 kDa subunit [Apis mellifera]
Length = 432
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
V +GP T VL L NMV P E+ D LED + EC KYG V V EI P
Sbjct: 326 VGTSGPATEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEG 381
Query: 322 VDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VD ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 382 VDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 432
>gi|390341852|ref|XP_792919.3| PREDICTED: splicing factor U2AF 50 kDa subunit-like
[Strongylocentrotus purpuratus]
Length = 386
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
GP T +L L NMV P E+ D+ E ++V EC KYG V R L P V
Sbjct: 284 GPNTEILCLMNMVTPEELKDDEEYDDIVEDVKEECQKYGQV-RSLEIPRPIPGLDVPGCG 342
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+I+V+F A L GR F R V +FYD +++ + E
Sbjct: 343 KIYVEFMTVMDAQAAQRALAGRKFANRTVVTSFYDVDKYHRREF 386
>gi|154319442|ref|XP_001559038.1| hypothetical protein BC1G_02202 [Botryotinia fuckeliana B05.10]
Length = 596
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV P E+ D E+ ++V EC KYG +VL ++ P ++ +
Sbjct: 497 RVLQLLNMVTPEELIDNEDYEEICEDVKEECEKYG---KVLEMKVPRPTGGSRQSTGVGK 553
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
IFV+F+ + KAL L GR F R V T++ EE F
Sbjct: 554 IFVKFDTPDSAGKALKALAGRKFADRTVVTTYFPEENF 591
>gi|389582230|dbj|GAB64785.1| RNA binding domain [Plasmodium cynomolgi strain B]
Length = 1046
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 275 TRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLI-------FEI------------ 315
+R+ + P E D +ED + EC K+G+V V++ F+
Sbjct: 898 SRIATFDELCDPSEYRDIVED-IKIECEKFGSVVEVVLPVFSRETFDFLLREAAKCAAKE 956
Query: 316 --TEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
T PN+ + F+ FE E TKA +L GR FG ++ A +Y E++F
Sbjct: 957 DRTHPNYDLTSIGCAFIYFETIEAATKARKELSGRKFGANIIEANYYSEKKF 1008
>gi|350417886|ref|XP_003491628.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Bombus impatiens]
Length = 428
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
V +GP T VL L NMV P E+ D LED + EC KYG V V EI P
Sbjct: 322 VGTSGPATEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEG 377
Query: 322 VDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VD ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 378 VDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 428
>gi|222624209|gb|EEE58341.1| hypothetical protein OsJ_09449 [Oryza sativa Japonica Group]
Length = 565
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 271 NGPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA 325
PP+ LLL+NM P + D +++D+V EC+K+G V + + + T
Sbjct: 468 TAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSG------- 520
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++++F+ A L GR+F G+++ ATF +++S
Sbjct: 521 -FVYLRFDSITAAMSAQKALHGRWFAGKMITATFMSPQQYS 560
>gi|218192112|gb|EEC74539.1| hypothetical protein OsI_10059 [Oryza sativa Indica Group]
Length = 567
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 271 NGPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA 325
PP+ LLL+NM P + D +++D+V EC+K+G V + + + T
Sbjct: 470 TAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSG------- 522
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++++F+ A L GR+F G+++ ATF +++S
Sbjct: 523 -FVYLRFDSITAAMSAQKALHGRWFAGKMITATFMSPQQYS 562
>gi|71996481|ref|NP_497326.2| Protein UAF-1, isoform b [Caenorhabditis elegans]
gi|351018335|emb|CCD62279.1| Protein UAF-1, isoform b [Caenorhabditis elegans]
Length = 143
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T +L L NMV E+ DDE E+ +V EC+KYG V + EI P + PV
Sbjct: 41 GRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSL---EIPRPYEDHPVPG 97
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + +A L GR F R V ++YD +++ +
Sbjct: 98 VGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 143
>gi|383854116|ref|XP_003702568.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Megachile
rotundata]
Length = 432
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
V +GP T VL L NMV P E+ D LED + EC KYG V V EI P
Sbjct: 326 VGTSGPATEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEG 381
Query: 322 VDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VD ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 382 VDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 432
>gi|340715832|ref|XP_003396412.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Bombus
terrestris]
gi|350417884|ref|XP_003491627.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Bombus impatiens]
Length = 432
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
V +GP T VL L NMV P E+ D LED + EC KYG V V EI P
Sbjct: 326 VGTSGPATEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEG 381
Query: 322 VDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VD ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 382 VDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 432
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGE-----VDDELEDEVGSECA-KYGTVTRVLIF 313
++E K +N N +R ++LRNM P E + ELED+V +E KYG V + +
Sbjct: 463 RTEVKPPPINVN-TASRCVVLRNMFDPAEETGENWEKELEDDVRAEAEEKYGHVVHISL- 520
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F+R + A+ L+GR+FGGR++ AT
Sbjct: 521 ---DPNSQGD----IYLKFDRVQGGENAIQGLNGRYFGGRMISAT 558
>gi|322792032|gb|EFZ16137.1| hypothetical protein SINV_12499 [Solenopsis invicta]
Length = 344
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 271 NGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
+GP T VL L NMV P E+ D LED + EC KYG V V EI P VD
Sbjct: 241 SGPATEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEGVDV 296
Query: 325 --AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 297 PGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 344
>gi|347842431|emb|CCD57003.1| hypothetical protein [Botryotinia fuckeliana]
Length = 606
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV P E+ D E+ ++V EC KYG +VL ++ P ++ +
Sbjct: 507 RVLQLLNMVTPEELIDNEDYEEICEDVKEECEKYG---KVLEMKVPRPTGGSRQSTGVGK 563
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
IFV+F+ + KAL L GR F R V T++ EE F
Sbjct: 564 IFVKFDTPDSAGKALKALAGRKFADRTVVTTYFPEENF 601
>gi|310793965|gb|EFQ29426.1| U2 snRNP auxilliary factor [Glomerella graminicola M1.001]
Length = 549
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
TRVL L NMV P E+ D E++++V ECAK+GTV V I + +IF
Sbjct: 449 TRVLQLLNMVTPEELMDNDDYEEIKEDVQEECAKFGTVLDVKIPRPVGGSRQSAGVGKIF 508
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V+FE E KAL L GR F R V T++ EE F
Sbjct: 509 VKFETKEAAKKALQALAGRKFADRTVVTTYFPEENF 544
>gi|307195151|gb|EFN77144.1| Splicing factor U2AF 50 kDa subunit [Harpegnathos saltator]
Length = 402
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 271 NGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
+GP T VL L NMV P E+ D LED + EC KYG V V EI P VD
Sbjct: 299 SGPATEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEGVDV 354
Query: 325 --AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 355 PGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 402
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 14/88 (15%)
Query: 278 LLLRNMVGPGE-----VDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
LLL+NM P E D +L ++V EC AKYG VTR+ + + + A I++
Sbjct: 572 LLLKNMFDPAEETEADWDKDLAEDVKDECQAKYGPVTRIHVEK--------ESAGEIYLT 623
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATF 359
F + + KAL L+GRFFGG+ + A +
Sbjct: 624 FADLDASRKALDGLNGRFFGGKPISAQY 651
>gi|307176032|gb|EFN65791.1| Splicing factor U2AF 50 kDa subunit [Camponotus floridanus]
Length = 432
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
V +GP T VL L NMV P E+ D LED + EC KYG V V EI P
Sbjct: 326 VGTSGPATEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEG 381
Query: 322 VDE--AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
VD ++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 382 VDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 432
>gi|308456694|ref|XP_003090769.1| hypothetical protein CRE_09879 [Caenorhabditis remanei]
gi|308260724|gb|EFP04677.1| hypothetical protein CRE_09879 [Caenorhabditis remanei]
Length = 344
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 53/268 (19%)
Query: 10 PPPSDEDKPT-NTTTTVWSSSAKMAPPTL----RKPSSIFAPPQTILKPQSKPKTTQNSL 64
PP + + KP NT S L R+ APP ++ ++ + +++
Sbjct: 13 PPAAKQAKPMLNTQMAFLQSQLAQKKAALQQKARQTVKSSAPPPPVIDLSARNRPLSSAV 72
Query: 65 PTRPHSSPAIAPSPDDAAALPQPA-----LVGVTSTVIEEYDPARPNDYEDYRREKKKKA 119
+P P ++ + LP+ A ++ + EY P PN++E
Sbjct: 73 TPKPFQPIRANPVTENISFLPKAATDESVMIFGEEHIKCEYYPMVPNNFE---------- 122
Query: 120 VDAEIRRELERRRQEGEERERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPS 179
+ +E+ R+Q RE+ RE A RL EE K+R+ ++ P
Sbjct: 123 ---VLAKEINDRKQ----REKTARE-----VAKRLQREHEEEDKKRSKGAAIAPPTMLIE 170
Query: 180 PPP----VN--VESGGGGGGF-------TIGKSETSGLGLGAGGQMTAAQRMMAKMGWKE 226
P P +N V+ F GK+ + GLG+ A +M K G++E
Sbjct: 171 PEPEVVKINDEVQEDKPQPSFKPPSFLPAFGKATSRGLGIAAN--------IMKKHGYRE 222
Query: 227 GQGLGRQEQGITTPLMARKTDRRAGVIV 254
GQGLG+ EQG++T L K RAG IV
Sbjct: 223 GQGLGKSEQGMSTALQVEKVGVRAGNIV 250
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPN 319
+ SV+ G P+ LLL+NM P + D +++++V EC+K+G + + + +
Sbjct: 504 IPSVDTIGVPSECLLLKNMFDPSIETEPDFDLDIKEDVQLECSKFGNLQHIYVDK----- 558
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+ A ++++FE ++ A L GR+F G+++ ATF
Sbjct: 559 ---NSAGFVYLRFENTQSAISAQRALHGRWFAGKMITATF 595
>gi|303323229|ref|XP_003071606.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240111308|gb|EER29461.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 545
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ D+V EC+KYG +VL ++ P ++ +
Sbjct: 446 RVLQLLNMVTAEELMDNDDYEEICDDVRDECSKYG---QVLEMKVPRPTGGSRQSAGVGK 502
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
I+V+F+ E KA+ L GR F R V TF+ EE F
Sbjct: 503 IYVKFDNYESAYKAMKALAGRKFQDRTVVTTFFSEENF 540
>gi|108706237|gb|ABF94032.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 566
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
PP+ LLL+NM P + D +++D+V EC+K+G V + + + T
Sbjct: 470 APPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSG-------- 521
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
++++F+ A L GR+F G+++ ATF +++S
Sbjct: 522 FVYLRFDSITAAMSAQKALHGRWFAGKMITATFMSPQQYS 561
>gi|332026432|gb|EGI66560.1| Splicing factor U2AF 50 kDa subunit [Acromyrmex echinatior]
Length = 435
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 271 NGPPTRVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
+GP T VL L NMV P E+ D LED + EC KYG V V EI P VD
Sbjct: 332 SGPATEVLCLLNMVTPEELMEEEEYEDILED-IKEECNKYGVVRSV---EIPRPIEGVDV 387
Query: 325 --AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F KA L GR F RVV +++D +++ + E
Sbjct: 388 PGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYHRREF 435
>gi|320031290|gb|EFW13263.1| splicing factor u2af large subunit [Coccidioides posadasii str.
Silveira]
Length = 545
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ D+V EC+KYG +VL ++ P ++ +
Sbjct: 446 RVLQLLNMVTAEELMDNDDYEEICDDVRDECSKYG---QVLEMKVPRPTGGSRQSAGVGK 502
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
I+V+F+ E KA+ L GR F R V TF+ EE F
Sbjct: 503 IYVKFDNYESAYKAMKALAGRKFQDRTVVTTFFSEENF 540
>gi|449680331|ref|XP_002158219.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like, partial [Hydra
magnipapillata]
Length = 259
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 275 TRVLLLRNMVGPGE-VDDELEDEVGS----ECAKYGTVTRVLIFEITEPN--FPVDEAVR 327
T +L L NMV E +DDE DE+ EC+KYG R+ +I PN F V +
Sbjct: 159 TNILCLMNMVVADELIDDEDYDEIFEDIREECSKYG---RIRSMQIPRPNHEFLVSGVGK 215
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F+++ SE++ A L GR F RVV +YD + + +++ +
Sbjct: 216 VFIEYATSEESKIASEALAGRKFANRVVVTAYYDPDAYHQHDFS 259
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Query: 262 EKKVKSVNFNGP-PTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIFE 314
EK K++ + P +R ++L+NM P E +LED+V +EC KYG V + +
Sbjct: 419 EKVTKTLPLDVPMASRCVVLKNMFDPAEETGDAWIKDLEDDVKTECENKYGHVVHIAL-- 476
Query: 315 ITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN I+++FE+ + KA+ L+GRFFGGR + A+
Sbjct: 477 --DPN----SQGEIYIKFEKVQGGEKAIQGLNGRFFGGRRISAS 514
>gi|328872798|gb|EGG21165.1| hypothetical protein DFA_01040 [Dictyostelium fasciculatum]
Length = 428
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 269 NFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIF-----EITEPNFPVD 323
N + PT+++++ N+ +++D++ EC KYG + ++ + + N D
Sbjct: 326 NCSSHPTKIIMITNIASR-----DVKDDIEYECKKYGRINNTIVHPNPSKKRSFSNDNND 380
Query: 324 EAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+++++FV++ + A DL+ RFF R + F++E +
Sbjct: 381 DSIKLFVEYLSIDAAIDACKDLNDRFFDKRKITVHFFNENHY 422
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 273 PP--TRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDE 324
PP +R LL NM P E ELE +V EC KYG V + + PN E
Sbjct: 501 PPIRSRCALLENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIAVV----PN----E 552
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+IFV+FE ++ KA+ L R+FGGR ++A+
Sbjct: 553 LGQIFVKFENADFAEKAITGLHQRWFGGRTIKAS 586
>gi|393245184|gb|EJD52695.1| hypothetical protein AURDEDRAFT_111297 [Auricularia delicata
TFB-10046 SS5]
Length = 387
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 14/100 (14%)
Query: 275 TRVLLLRNMVGPGEVDDE------LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
+RV++L++M E+D++ L+D+V EC+ G VT V++++ EP+ +
Sbjct: 267 SRVVVLKHMFSLAELDEDASLLLDLKDDVREECSNLGDVTNVVLYD-KEPDGI------M 319
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYD-EERFSK 367
V+F +I ++GRFFGGR + A YD ++R+ +
Sbjct: 320 TVKFRDPVSAQACVIKMNGRFFGGRRIEAWVYDGKQRYQR 359
>gi|71021011|ref|XP_760736.1| hypothetical protein UM04589.1 [Ustilago maydis 521]
gi|46100129|gb|EAK85362.1| hypothetical protein UM04589.1 [Ustilago maydis 521]
Length = 688
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNG 272
T A R+MA G+ G GLG +GI PL + R G+I++AS + +
Sbjct: 501 TFASRLMASHGYVPGTGLGTSAKGIVEPLSVSSSHGR-GLIISASSAALVQAEAEQYGSA 559
Query: 273 PPTRVLLLRNMVGP----GEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
+ V++L NM G+ +L +V EC+K+G V RVL T+ P
Sbjct: 560 QASPVIVLLNMASAQDLVGDSYQDLVQDVTEECSKFGYVQRVLAHVSTDDQAP 612
>gi|198456623|ref|XP_001360392.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
gi|198135682|gb|EAL24967.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 23/111 (20%)
Query: 275 TRVLLLRNMVGPGEVDD--ELED---EVGSECAKYGTVTRVLIFEITEPNFPV------- 322
T+VL L NMV P E+ D E ED ++ EC+KYG VL +I P
Sbjct: 379 TQVLCLLNMVLPEELLDNEEYEDIRADIEQECSKYG---EVLSLKIPRPQVSGGEGEGEG 435
Query: 323 --DEAVR------IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
D A R ++V F E + KAL L GR F GR+V +F+D +++
Sbjct: 436 GGDSATRPKGCGKVYVHFGSIEDSEKALGALSGRKFSGRIVIGSFFDRDKY 486
>gi|307109776|gb|EFN58013.1| hypothetical protein CHLNCDRAFT_57088 [Chlorella variabilis]
Length = 546
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 17/93 (18%)
Query: 274 PTRVLLLRNMVGPGE-----VDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVR- 327
PT+ LLL+NM P E D E+ ++VGSEC KYG V V VD R
Sbjct: 452 PTQCLLLKNMFDPAEETADNWDAEIAEDVGSECQKYGPVEHVF----------VDRNSRG 501
Query: 328 -IFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
++V+F A L GR+F R + A F
Sbjct: 502 FVYVKFTAISSAANAQRALHGRWFAARQIAADF 534
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+ E +++ E KYG + +V+I + PV ++
Sbjct: 494 PTKVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYGNLVKVVIPRPDPSDAPVAGVGKV 553
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ E +TKA + GR FGG V A FY E++F+ +
Sbjct: 554 FLEYADVEGSTKAKTGMHGRKFGGNQVVAVFYPEDKFAAEQ 594
>gi|168026451|ref|XP_001765745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682922|gb|EDQ69336.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+V+ L +V P E+ D+E +D ++ EC KYG + RV+I + V ++F
Sbjct: 390 TKVVALTQVVSPDELKDDEEYQDILEDMKEECGKYGNLLRVVIPRPRDGE-DVPGVGKVF 448
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
V++ + KA L GR FGG V A +Y EE+F+ +
Sbjct: 449 VEYSDTAGAAKAKASLHGRRFGGHSVVAVYYPEEKFAAGD 488
>gi|119189253|ref|XP_001245233.1| hypothetical protein CIMG_04674 [Coccidioides immitis RS]
gi|392868136|gb|EAS33879.2| U2 snRNP auxilliary factor, large subunit, splicing factor
[Coccidioides immitis RS]
Length = 545
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ D+V EC+KYG ++L ++ P ++ +
Sbjct: 446 RVLQLLNMVTAEELMDNDDYEEICDDVRDECSKYG---QILEMKVPRPTGGSRQSAGVGK 502
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
I+V+F+ E KA+ L GR F R V TF+ EE F
Sbjct: 503 IYVKFDNYESAYKAMKALAGRKFQDRTVVTTFFSEENF 540
>gi|223950169|gb|ACN29168.1| unknown [Zea mays]
gi|413920349|gb|AFW60281.1| splicing factor U2AF subunit [Zea mays]
Length = 594
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+ E +++ E KYG + +V+I + PV ++
Sbjct: 492 PTKVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYGNLVKVVIPRPDPSDAPVAGVGKV 551
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ E +TKA + GR FGG V A FY E++F+ +
Sbjct: 552 FLEYADVEGSTKAKTGMHGRKFGGNQVVAVFYPEDKFAAEQ 592
>gi|449441167|ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+VL L +V P E+ D++ ED ++ E K+GT+ V+I PN ++F
Sbjct: 486 TKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPR-PRPNEAAPGVGKVF 544
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+++ + TKA L+GR FGG V A FY E +F++ E
Sbjct: 545 LEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGE 584
>gi|427789501|gb|JAA60202.1| Putative splicing factor u2af large subunit rrm superfamily
[Rhipicephalus pulchellus]
Length = 462
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 272 GPPTRVLLLRNMVGP------GEVDDELEDEVGSECAKYGTVTRVLIFEITEP--NFPVD 323
GPPT VL L N+V P E +D LED + EC KYG V + EI P V
Sbjct: 360 GPPTEVLCLMNLVCPEELKDEEEYEDILED-IHEECNKYGVVKSI---EIPRPIDGVEVP 415
Query: 324 EAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+ +V+F KA L GR F RVV +++D +++ + E
Sbjct: 416 GCGKAYVEFNSVIDCQKAQQSLTGRKFSNRVVVTSYFDPDKYHRREF 462
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+VL L +V P E+ D++ ED ++ E K+GT+ V+I PN ++F
Sbjct: 486 TKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPR-PRPNEAAPGVGKVF 544
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+++ + TKA L+GR FGG V A FY E +F++ E
Sbjct: 545 LEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEY 585
>gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+VL L +V E+ DD+ +D ++ EC K+G++ V+I P ++F
Sbjct: 449 TKVLCLTQVVSVDELNDDDDYQDILEDMRVECGKFGSLLNVVIPRPNPSGEPTPGLGKVF 508
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+++ E +++A L+GR FGG V A FY E +FS+ E
Sbjct: 509 LEYADVESSSRARQGLNGRKFGGNEVIAVFYPENKFSEGE 548
>gi|449299113|gb|EMC95127.1| hypothetical protein BAUCODRAFT_526859 [Baudoinia compniacensis
UAMH 10762]
Length = 432
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NM+ P E+ DE+ ++V ECAKYG + V + + + + +I+
Sbjct: 332 SRVLCLMNMITPEELMDADEADEILEDVKEECAKYGAIIDVKMPRPSSGSRQSNGIGKIY 391
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V++E+ E KAL L GR F R V TF+ EE F
Sbjct: 392 VKYEKPEAAQKALAALAGRKFADRTVVVTFFGEEYF 427
>gi|358378060|gb|EHK15743.1| hypothetical protein TRIVIDRAFT_79964 [Trichoderma virens Gv29-8]
Length = 503
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+ V+ L NMV P E+ D E+ ++V EC+K+G +V+ ++ P+ ++
Sbjct: 403 SSVIQLLNMVTPEELMDNDDYEEICEDVQDECSKFG---KVVELKVPRPSGGSRQSTGVG 459
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+I+V+F+ E TKAL L GR F R V +T++ EE F
Sbjct: 460 KIYVKFDSEESATKALTALAGRKFADRTVVSTYFPEENF 498
>gi|145523992|ref|XP_001447829.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415351|emb|CAK80432.1| unnamed protein product [Paramecium tetraurelia]
Length = 419
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNF--PVDEAV 326
PT +L+++N++ +V D+E D ++ EC+K+GTV ++I P F +
Sbjct: 282 PTNILVIKNVLTLEDVTIDEEFNDIMDDIKEECSKFGTVKNIII---PRPEFGKIIIGVG 338
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEI 377
+IFV++E++++ A L GR +G + V + E+++K + L +I
Sbjct: 339 KIFVEYEKTQEARTARRYLAGRMYGDKTVECEYLSREKWAKRQFTDLNEDI 389
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+V+ L + V E+ D E+ D++ EC+K+GT+ V+I P ++F
Sbjct: 498 TKVVCLTHAVSSDELKDDEDYEEILDDMRQECSKFGTLVNVVIPRPPSDGEPAAGVGKVF 557
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+++ + TKA L+GR F G V A FY E +F++ +
Sbjct: 558 LEYVDIDGATKARAGLNGRKFDGNQVVAVFYPENKFAQGD 597
>gi|154287404|ref|XP_001544497.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408138|gb|EDN03679.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 609
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 177 SPSPPP-VNVESG------GGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQG 229
SPSPPP +N +SG GGG G++ G G G T A RMMAKMG+++GQG
Sbjct: 46 SPSPPPTMNAKSGHRSTWENGGGSTLKGQNRADKAGPGGSGN-TFAARMMAKMGYQKGQG 104
Query: 230 LGRQEQGITTPLMARKTDRRAGVIVNASENKSEK 263
LG QG+ P+ R G+ + A + KS++
Sbjct: 105 LGASGQGMLNPI--ETVLRPQGIGLGAVKEKSQQ 136
>gi|168061001|ref|XP_001782480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666033|gb|EDQ52699.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 265 VKSVNFNGPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPN 319
V +V+ G P+ LLL+NM P E D +++++V EC+K+G V + + +
Sbjct: 258 VGAVDAIGQPSEYLLLKNMFDPSTESDPEFDLDIKEDVQDECSKFGAVKHIFVDK----- 312
Query: 320 FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+ A +++ FE + A L GR+F G+++ AT+
Sbjct: 313 ---NSAGHVYLCFESTPAAMAAQRALHGRWFAGKMITATY 349
>gi|343426615|emb|CBQ70144.1| related to pre-mRNA splicing factor U2AF large chain [Sporisorium
reilianum SRZ2]
Length = 710
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 28/126 (22%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLI-------------- 312
G PT +++ NMV P E+ D+ E +++ EC KYG VT V +
Sbjct: 565 GEPTSCMVMLNMVTPEELQDDEEYADIVEDIRDECTKYGAVTDVRVPRPAKESKGAAAHQ 624
Query: 313 ---------FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
E +P+ + R++V++ +E +AL + GR FGGR V F E+
Sbjct: 625 WKRSQDESGAEGDKPDAEREGVGRVYVRYGETEHCAQALRAIAGRQFGGRTVICAFLKED 684
Query: 364 RFSKNE 369
+ +E
Sbjct: 685 DWPGDE 690
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 278 LLLRNMVGPGE-----VDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
LLL+NM P E D +L ++V EC AKYG VT + + + + A I+V
Sbjct: 569 LLLKNMFNPAEETEPDWDTDLAEDVKEECQAKYGRVTSIHVEK--------ESAGEIYVT 620
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATF 359
F + + KAL L+GRFFGG+ + A +
Sbjct: 621 FADLDASRKALDGLNGRFFGGKPISAQY 648
>gi|121711505|ref|XP_001273368.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
gi|119401519|gb|EAW11942.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
Length = 583
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---VR 327
RVL L NMV P E+ D E+ D+V EC+KYG +VL ++ P+ ++ +
Sbjct: 466 RVLQLLNMVTPEELMDNDDYEEICDDVREECSKYG---KVLDLKVPRPSGGSRQSPGVGK 522
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
IFV+F+ E T AL L GR F R V T++ E
Sbjct: 523 IFVKFDTVESATNALKALAGRKFSDRTVVTTYFAE 557
>gi|356517814|ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
Length = 605
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+V+ L + V E+ D E+ D++ EC+K+GT+ V+I P ++F
Sbjct: 503 TKVVCLTHAVSSDELKDDEDYDEILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVF 562
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+++ + TKA L+GR F G V A FY E +F++ +
Sbjct: 563 LEYVDIDGATKARAGLNGRKFDGNQVVAVFYPENKFAQGD 602
>gi|348518982|ref|XP_003447010.1| PREDICTED: HIV Tat-specific factor 1 homolog [Oreochromis
niloticus]
Length = 452
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+V+++RNM P + + +E +++ SEC K+G V +V++F+ P A
Sbjct: 278 KVVIIRNMFHPSDFEEDPLVLNEYREDLRSECEKFGEVKKVILFD----RHPDGVAS--- 330
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F+ EQ ++ +GR+FGGR + A +D
Sbjct: 331 VAFKEPEQADACILSFNGRWFGGRQLSAQLWD 362
>gi|414591747|tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 590
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 274 PTRVLLLRNMVGPGEV-DDELEDEVGS----ECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ DDE D++ E KYG + +V I PV ++
Sbjct: 488 PTKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYGNLVKVAIPRPDPSGAPVAGVGKV 547
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F+++ E +TKA + GR FGG V A FY E++F+ +
Sbjct: 548 FLEYADVEGSTKAKTGMHGRKFGGNQVVAVFYPEDKFAAEQY 589
>gi|226532558|ref|NP_001140768.1| uncharacterized protein LOC100272843 [Zea mays]
gi|194701008|gb|ACF84588.1| unknown [Zea mays]
gi|414591744|tpg|DAA42315.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 583
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 274 PTRVLLLRNMVGPGEV-DDELEDEVGS----ECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ DDE D++ E KYG + +V I PV ++
Sbjct: 481 PTKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYGNLVKVAIPRPDPSGAPVAGVGKV 540
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F+++ E +TKA + GR FGG V A FY E++F+ +
Sbjct: 541 FLEYADVEGSTKAKTGMHGRKFGGNQVVAVFYPEDKFAAEQY 582
>gi|325089836|gb|EGC43146.1| G-patch domain-containing protein [Ajellomyces capsulatus H88]
Length = 786
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 177 SPSPPP-VNVESG-----GGGGGFTI-GKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQG 229
SPSPPP +N +SG GGG T+ G++ G G G T A RMMAKMG+++GQG
Sbjct: 46 SPSPPPTMNAKSGHRSTWANGGGSTLKGQNRADKAGPGGSGN-TFAARMMAKMGYQKGQG 104
Query: 230 LGRQEQGITTPLMARKTDRRAGVIVNASENKSEK 263
LG QG+ P+ R G+ + A + KS++
Sbjct: 105 LGASGQGMLNPI--ETVLRPQGIGLGAVKEKSQQ 136
>gi|320170643|gb|EFW47542.1| splicing factor u2af large subunit [Capsaspora owczarzaki ATCC
30864]
Length = 393
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T V+ L NMV P E+ D ++ D++ EC+KYG V V I P V +++
Sbjct: 294 TPVVQLLNMVTPEELMDPEEYQDIVDDIREECSKYGEVVSVAIPRPV-PGREVSGVGKVY 352
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V+F + +AL L GR F R+V +FY + + ++E
Sbjct: 353 VEFSNVDHAYQALQALSGRKFASRIVVTSFYGLDAYRRSEF 393
>gi|240276304|gb|EER39816.1| G-patch domain-containing protein [Ajellomyces capsulatus H143]
Length = 786
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 177 SPSPPP-VNVESG-----GGGGGFTI-GKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQG 229
SPSPPP +N +SG GGG T+ G++ G G G T A RMMAKMG+++GQG
Sbjct: 46 SPSPPPTMNAKSGHRSTWANGGGSTLKGQNRADKAGPGGSGN-TFAARMMAKMGYQKGQG 104
Query: 230 LGRQEQGITTPLMARKTDRRAGVIVNASENKSEK 263
LG QG+ P+ R G+ + A + KS++
Sbjct: 105 LGASGQGMLNPI--ETVLRPQGIGLGAVKEKSQQ 136
>gi|340520994|gb|EGR51229.1| predicted protein [Trichoderma reesei QM6a]
Length = 355
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 15/149 (10%)
Query: 227 GQGLGRQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGP 286
G G RQ + +KT + A + + ++ E + V N R ++LR+M
Sbjct: 208 GNGQKRQRNEKDRQKIIKKTQKLAAKLADWDDD--EPYLAPVQPNSKRDRTVILRHMFTL 265
Query: 287 GEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTK 340
E+++ E+++++ EC+K G VT V+++++ EP E V + V+F+ +E
Sbjct: 266 QELEEDPAALLEIKEDIRDECSKLGPVTSVVLYDL-EP-----EGV-VSVRFKTAEAAAA 318
Query: 341 ALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+ + GR FGG +V AT E+F K++
Sbjct: 319 CIKLMHGRSFGGNIVHATLATGEKFKKSQ 347
>gi|195149862|ref|XP_002015874.1| GL11290 [Drosophila persimilis]
gi|194109721|gb|EDW31764.1| GL11290 [Drosophila persimilis]
Length = 487
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 23/111 (20%)
Query: 275 TRVLLLRNMVGPGEVDD--ELED---EVGSECAKYGTVTRVLIFEITEPN---------F 320
T+VL L NMV P E+ D E ED ++ EC+KYG VL +I P
Sbjct: 375 TQVLCLLNMVLPEELLDNEEYEDIRADIEQECSKYG---EVLSLKIPRPQASGGEGEGGG 431
Query: 321 PVDEAVR------IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
D A R ++V F E + KAL L GR F GR+V +F+D +++
Sbjct: 432 GGDSATRPKGCGKVYVHFGTIEDSEKALGALSGRKFSGRIVIGSFFDRDKY 482
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
TR ++L NM P E D +LE ++ EC KYG V + + D +F
Sbjct: 363 TRYVMLNNMFNPNEETDPDWVSDLEADIKIECEKYGRVEHIKV--------NSDSMGEVF 414
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
++F+R KA+ L+GR+FGG+ + A + ++ N
Sbjct: 415 LKFDRVGSAEKAISALNGRWFGGKQITAACISDAIYNAN 453
>gi|330803435|ref|XP_003289712.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
gi|325080222|gb|EGC33787.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
Length = 501
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDELEDE-----VGSECAKYGTVTRVLIFEITEPNFPV 322
++ N P+RV+ L N+V ++ D+ E + V EC +G T+ L + N P+
Sbjct: 372 IDNNTKPSRVIQLLNLVDKEDLYDDKEYDNILIDVKEECENFGP-TQSLWLPMPSKN-PL 429
Query: 323 DEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
D RI+++F++ E + KA + L G+ + GR + + +Y E+ + KN
Sbjct: 430 D-VTRIYIEFQQLESSQKACLGLGGKKYNGRTIFSAYYPEDLYYKN 474
>gi|388580158|gb|EIM20475.1| hypothetical protein WALSEDRAFT_55089 [Wallemia sebi CBS 633.66]
Length = 391
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 36/134 (26%)
Query: 275 TRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLI----------------- 312
T VLLL NMV E+ D+L+ +++ EC++YG + ++ I
Sbjct: 245 TNVLLLLNMVTAEELKDDLDYQEICEDIQEECSQYGEIIKIKIPRPPRPDDPVFSTPGVT 304
Query: 313 --------FEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
FE V +IF+ ++ EQ +KAL L GR FGGR V + E
Sbjct: 305 LSSGEDLRFEAASEELGVG---KIFILYKTEEQASKALKALAGRVFGGRTVIGAYGKPED 361
Query: 365 FSKNELAPLPGEIP 378
E APLP E+P
Sbjct: 362 V---EDAPLPPELP 372
>gi|403175591|ref|XP_003888994.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171670|gb|EHS64431.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 713
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 14/110 (12%)
Query: 272 GPPTRVLLLRNMVGPGE-VDD----ELEDEVGSECAKYGTVTRVLI-----FEITEPNFP 321
G TRVL + NMV E VDD E+ +++ EC KYG + V I E +
Sbjct: 580 GEKTRVLQMLNMVNQEELVDDQEYGEILEDIRDECGKYGKIEGVRIPRPIKNEKGRIDLK 639
Query: 322 VDEAV----RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
E+V ++FV FE+ ++ AL+ + GR F GRV+ + E+ ++
Sbjct: 640 ASESVDGLGKVFVMFEKVDECAAALLAIAGRQFAGRVIICAYAPEDAMTE 689
>gi|348557907|ref|XP_003464760.1| PREDICTED: LOW QUALITY PROTEIN: HIV Tat-specific factor 1 homolog
[Cavia porcellus]
Length = 752
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ ECAK+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPEDFEDDPLVLNEIREDLRVECAKFGQIKKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F +E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDAEEADHCIQTLDGRWFGGRQITAQAWD 348
>gi|239608660|gb|EEQ85647.1| G-patch domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 786
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 176 RSPSPPP-VNVES-----GGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQG 229
+SPSPPP +N +S GGG + +G G +G T A RMMAKMG+KEGQG
Sbjct: 45 QSPSPPPTMNAKSTHRPAWTNGGGSSPRGQNRAGKGGPSGSGNTFAARMMAKMGYKEGQG 104
Query: 230 LGRQEQGITTPL 241
LG QG+ TP+
Sbjct: 105 LGASGQGMLTPI 116
>gi|122245120|sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|68036764|gb|AAY84880.1| U2AF large subunit [Triticum aestivum]
Length = 543
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYG + +V+I PV ++
Sbjct: 438 PTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVVIPRPHPSGEPVSGVGKV 497
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + +TKA + GR FGG V A FY E +F+ +
Sbjct: 498 FLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFADED 538
>gi|145502691|ref|XP_001437323.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404473|emb|CAK69926.1| unnamed protein product [Paramecium tetraurelia]
Length = 438
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNF--PVDEAV 326
PT +L+++N++ +V D+E D ++ EC+K+GTV V+I P F +
Sbjct: 301 PTNILVIKNVLTLEDVTIDEEFNDIMEDIREECSKFGTVKNVII---PRPEFGKIIVGVG 357
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEI 377
+IFV++E++++ A L GR +G + V + E+++K + L +I
Sbjct: 358 KIFVEYEKTQEARTARRYLAGRMYGDKTVECEYLSREKWAKRQFTDLNEDI 408
>gi|331243454|ref|XP_003334370.1| splicing factor U2AF subunit [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 600
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 14/110 (12%)
Query: 272 GPPTRVLLLRNMVGPGE-VDD----ELEDEVGSECAKYGTVTRVLI-----FEITEPNFP 321
G TRVL + NMV E VDD E+ +++ EC KYG + V I E +
Sbjct: 467 GEKTRVLQMLNMVNQEELVDDQEYGEILEDIRDECGKYGKIEGVRIPRPIKNEKGRIDLK 526
Query: 322 VDEAV----RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
E+V ++FV FE+ ++ AL+ + GR F GRV+ + E+ ++
Sbjct: 527 ASESVDGLGKVFVMFEKVDECAAALLAIAGRQFAGRVIICAYAPEDAMTE 576
>gi|428671645|gb|EKX72563.1| conserved hypothetical protein [Babesia equi]
Length = 455
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 274 PTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEI----TEPNFPVDE 324
PTRVL L N+V E+DD+ E D+V +EC YG V R+ + + TE +
Sbjct: 308 PTRVLWLSNLVSKEELDDDAEYFDIIDDVRTECEDYGQVIRLELPRVPKGLTEEEMKTVD 367
Query: 325 AVRI---FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA-PLPG 375
+ FV F + TKA L GR FG R+V A ++ E F L P+P
Sbjct: 368 TSSVGCAFVLFTTIDGCTKARKILGGRRFGPRIVDAHYFSELYFLTGRLGNPIPN 422
>gi|242803779|ref|XP_002484243.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
gi|218717588|gb|EED17009.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
Length = 543
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 275 TRVLLLRNMVGPGEV---DD--ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+R+L L NMV E+ DD E+ ++V EC+KYG +VL +I P ++
Sbjct: 443 SRILQLLNMVTADELINNDDYEEILEDVQDECSKYG---QVLDVKIPRPAGGSRQSAGVG 499
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+I+V+F+ E T AL L GR F R V T++ EE F
Sbjct: 500 KIYVKFDSVESATNALKALAGRKFSDRTVVTTYFPEESF 538
>gi|440633242|gb|ELR03161.1| hypothetical protein GMDG_05987 [Geomyces destructans 20631-21]
Length = 559
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ ++V EC KYG +VL +I P+ ++ +
Sbjct: 460 RVLQLLNMVTAEELIDNEDYEEILEDVKEECEKYG---KVLDIKIPRPSGGSRQSAGVGK 516
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
IFV+F+ KAL L GR F R V T++ EE F
Sbjct: 517 IFVKFDTPASAGKALRTLAGRKFADRTVVTTYFSEENF 554
>gi|327353798|gb|EGE82655.1| G-patch domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 786
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 176 RSPSPPP-VNVES-----GGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQG 229
+SPSPPP +N +S GGG + +G G +G T A RMMAKMG+KEGQG
Sbjct: 45 QSPSPPPTMNAKSTHRPAWTNGGGSSPRGQNRAGKGGPSGSGNTFAARMMAKMGYKEGQG 104
Query: 230 LGRQEQGITTPL 241
LG QG+ TP+
Sbjct: 105 LGASGQGMLTPI 116
>gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 555
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+VL L +V E+ DD+ +D ++ +EC K+G + V+I P ++F
Sbjct: 453 TKVLCLTEVVTVDELNDDDDYQDILEDMRTECEKFGALVNVVIPRPNPNGVPTPGLGKVF 512
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+++ + ++KA L+GR FGG V A FY E +FS+ +
Sbjct: 513 LEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGD 552
>gi|342873171|gb|EGU75391.1| hypothetical protein FOXB_14096 [Fusarium oxysporum Fo5176]
Length = 661
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ ++V EC+K+G + V + T + +IF
Sbjct: 472 SRVLQLLNMVTAEELLDNDDYEEICEDVKEECSKFGKIIDVKVPRPTGGSRQSAGVGKIF 531
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
V++E++E T KAL L GR F R V T++ E
Sbjct: 532 VKYEKAEDTAKALQALAGRKFADRTVVTTYFPE 564
>gi|12847222|dbj|BAB27483.1| unnamed protein product [Mus musculus]
Length = 561
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++L+NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 265 RVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 317
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 318 VSFREPEEADHCIQTLDGRWFGGRQITAQAWD 349
>gi|258576333|ref|XP_002542348.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902614|gb|EEP77015.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 621
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ D+V EC+KYG +VL +I P +A +
Sbjct: 450 RVLQLLNMVTAEELMDSDEYEEICDDVREECSKYG---QVLDLKIPRPTGGSRQAAGVGK 506
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
I+V+F+ + +KA+ L GR F R V TF+ E
Sbjct: 507 IYVKFDSYDSASKAMKALAGRKFQDRTVVTTFFSE 541
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEV--DD---ELEDEVGSECA-KYGTVTRVLIF 313
++EKK VN N +R ++L NM P E DD ELED+V E KYG V + +
Sbjct: 444 RTEKKPLPVNVN-TASRCVVLHNMFNPDEEEGDDWVKELEDDVRQEAEDKYGRVVHISV- 501
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++FE+ + A+ L+GR+FGGR++ A+
Sbjct: 502 ---DPNSKGD----IYLKFEKVQGGENAIRGLNGRYFGGRMIDAS 539
>gi|225559821|gb|EEH08103.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 786
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 177 SPSPPP-VNVESG-----GGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGL 230
SPSPPP +N +SG GGG T+ +G G T A RMMAKMG+++GQGL
Sbjct: 46 SPSPPPTMNAKSGHRSTWANGGGSTLKGQNGAGKAGPGGSGNTFAARMMAKMGYQKGQGL 105
Query: 231 GRQEQGITTPLMARKTDRRAGVIVNASENKSEK 263
G QG+ P+ R G+ + A + KS++
Sbjct: 106 GASGQGMLNPI--ETVLRPQGIGLGAVKEKSQQ 136
>gi|168021052|ref|XP_001763056.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685868|gb|EDQ72261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 238 TTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGP---PTRVLLLRNMVGPGEV--DDE 292
T +AR +A V+ +A + + +V ++ P PT V+ L +V P E+ D+E
Sbjct: 363 ATARLARPKPDQANVLAHAQQQIA-IQVLVYSWMSPVETPTNVVALTQVVSPDELKDDEE 421
Query: 293 LED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRF 349
+D ++ EC KYG + +++I + V ++FV++ + KA L GR
Sbjct: 422 YQDILEDMKEECGKYGNLVKLVIPRPRDGE-DVPGVGKVFVEYSDTAGAAKAKASLHGRR 480
Query: 350 FGGRVVRATFYDEERFS 366
FGG V A +Y E+FS
Sbjct: 481 FGGHSVVAVYYPAEKFS 497
>gi|432957894|ref|XP_004085931.1| PREDICTED: splicing factor 45-like, partial [Oryzias latipes]
Length = 244
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 201 TSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV 254
TS GG T A ++M K G+KEGQGLG+ EQG++T L KT +R G I+
Sbjct: 186 TSSFLANMGG--TVAHKIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKII 237
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYGT+ +V+I PV ++
Sbjct: 442 PTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGTLVKVIIPRPDPSGQPVAGVGKV 501
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + KA L GR FGG V A Y E++F+ E
Sbjct: 502 FLEYADIDGAAKAKTALHGRKFGGNPVVAVCYAEDKFANGE 542
>gi|351695595|gb|EHA98513.1| HIV Tat-specific factor 1-like protein [Heterocephalus glaber]
Length = 728
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++L+NM P + +D E+ D++ EC+K+G + ++L+F+ P A
Sbjct: 261 RVVILKNMFHPTDFEDDPLVLNEIRDDLRVECSKFGQIKKLLLFD----RHPDGVAS--- 313
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 314 VSFRDPEEADHCIQTLDGRWFGGRQITAQPWD 345
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 573
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 275 TRVLLLRNMVGPGEVDDE------LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
T+VL L ++ E++D+ LED + +EC K+G++ V+I + P ++
Sbjct: 471 TKVLSLTEVISADELNDDEDYQDILED-MRTECGKFGSLVNVVIPRPSPNGEPTPGVGKV 529
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + ++KA L+GR FGG V A FY E +F + +
Sbjct: 530 FLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGD 570
>gi|453082700|gb|EMF10747.1| hypothetical protein SEPMUDRAFT_48483 [Mycosphaerella populorum
SO2202]
Length = 432
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 276 RVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
RVL L NM+ P E+ DE+ ++V ECAKYG + V + T + +I++
Sbjct: 333 RVLALMNMITPEELMDPDDADEILEDVKEECAKYGPLLEVKMPRPTGGSRQSTGVGKIYL 392
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
++E SE KAL L GR F R V T++ EE F N
Sbjct: 393 KYETSEHAAKALAALAGRKFADRTVVVTYFGEEYFDVN 430
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEV--DD---ELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R ++L NM P E DD ELEDEV E KYG V + +
Sbjct: 457 KTETKPLPVNVN-MASRCVVLHNMFDPAEEEGDDWVKELEDEVRQEAEEKYGHVVHISV- 514
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 515 ---DPNSKGD----IYLKFDKVQGGENAIKGLNGRYFGGRMIDAS 552
>gi|340373805|ref|XP_003385430.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Amphimedon
queenslandica]
Length = 529
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 275 TRVLLLRNMVGPGEV--DDELE---DEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
T VL L NM E+ DDE E ++V EC+ YG V + P PV+ +
Sbjct: 427 TTVLCLMNMTTEEELRDDDEYEGILEDVREECSNYGQV-----LSVAAPR-PVEGTLVPG 480
Query: 327 --RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+IFV+F ++Q +A L GR F RVV +F+D E++ + A
Sbjct: 481 LGKIFVEFAATDQCQRAQTALAGRKFANRVVVTSFFDLEKYRQKNFA 527
>gi|116197673|ref|XP_001224648.1| hypothetical protein CHGG_06992 [Chaetomium globosum CBS 148.51]
gi|88178271|gb|EAQ85739.1| hypothetical protein CHGG_06992 [Chaetomium globosum CBS 148.51]
Length = 487
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 37/147 (25%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR----------------AGVI 253
GQ AQR+MAK GW +G GLG + GITT L + R+ G I
Sbjct: 303 GQKGFAQRLMAKYGWTKGSGLGAAQTGITTALRVQVEKRKRRPDAEGGGFVGPAGGRGRI 362
Query: 254 V--NASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECA-KYG 305
+ N N+ E+ G + V++L M+ GEV+ L E+G EC +YG
Sbjct: 363 IAPNVKGNQGEED----GGVGKMSVVVVLDRMLDGMADVEGEVEAGLGQEIGEECGERYG 418
Query: 306 TVTRVLIFEITEPNFPVDEAVRIFVQF 332
V R+++ E R+F++F
Sbjct: 419 RVERIVVDV---------EGARVFIRF 436
>gi|148710217|gb|EDL42163.1| HIV TAT specific factor 1, isoform CRA_c [Mus musculus]
Length = 464
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++L+NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 168 RVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 220
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 221 VSFREPEEADHCIQTLDGRWFGGRQITAQAWD 252
>gi|118376546|ref|XP_001021455.1| hypothetical protein TTHERM_00318730 [Tetrahymena thermophila]
gi|89303222|gb|EAS01210.1| hypothetical protein TTHERM_00318730 [Tetrahymena thermophila
SB210]
Length = 459
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 274 PTRVLLLRNMVGPGE--VDDE---LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PTR+L+L NM+ GE +D+E +E++V EC+K+G V ++ I ++ N V RI
Sbjct: 372 PTRILVLHNMIADGELIIDEEFRQIEEDVKEECSKHGKVVKITIPRPSDSNEQVKGQGRI 431
Query: 329 FVQFERSE 336
FV++E ++
Sbjct: 432 FVEYENTD 439
>gi|212539738|ref|XP_002150024.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067323|gb|EEA21415.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 556
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
TRVL L NMV E+ + E+ ++V EC+KYG +VL +I P ++
Sbjct: 451 TRVLQLLNMVTADELINNEDYEEILEDVQDECSKYG---QVLDLKIPRPAGGSRQSAGVG 507
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+IFV+F+ E T AL L GR F R V T++ E F
Sbjct: 508 KIFVKFDTVESATNALKALAGRKFSDRTVVTTYFPEVSF 546
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E AKYG V + +
Sbjct: 459 KTETKPLPVNVN-MASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAKYGHVVHISL- 516
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F++ + A+ L+GR+FGGR++ A
Sbjct: 517 ---DPNSAGD----IYLKFDKVQGGENAIKGLNGRYFGGRMITA 553
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E AKYG V + +
Sbjct: 455 KTETKPLPVNVN-MASRCVVLHNMFDPAEEEGEDWIKELEDDVREEAEAKYGHVVHISL- 512
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F++ + A+ L+GR+FGGR++ A
Sbjct: 513 ---DPNSAGD----IYLKFDKVQGGENAIKGLNGRYFGGRMITA 549
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E AKYG V + +
Sbjct: 430 KTETKPLPVNVN-MASRCVVLHNMFDPAEEEGEDWIKELEDDVREEAEAKYGHVVHISL- 487
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F++ + A+ L+GR+FGGR++ A
Sbjct: 488 ---DPNSAGD----IYLKFDKVQGGENAIKGLNGRYFGGRMITA 524
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E AKYG V + +
Sbjct: 458 KTETKPLPVNVN-MASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAKYGHVVHISL- 515
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F++ + A+ L+GR+FGGR++ A
Sbjct: 516 ---DPNSAGD----IYLKFDKVQGGENAIKGLNGRYFGGRMITA 552
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSECA-KYGTVTRVLIF 313
K+E K +N N +R +LLRNM P E ELE++V SEC KYG V +
Sbjct: 444 KTETKPLPINVN-MASRCVLLRNMFDPAEETGEAWIKELEEDVRSECEEKYGHVVHI--- 499
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+ V I+++F+R + A+ L+GR+FGG+ + A
Sbjct: 500 -----SLDVSSQGDIYLKFDRVQGGENAIKGLNGRYFGGKQITA 538
>gi|326475623|gb|EGD99632.1| splicing factor u2af large subunit [Trichophyton tonsurans CBS
112818]
gi|326483752|gb|EGE07762.1| splicing factor U2AF subunit [Trichophyton equinum CBS 127.97]
Length = 565
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ ++V EC+KYG V + +I P+ +A +
Sbjct: 457 RVLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEEL---KIPRPSAGSRQAAGVGK 513
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAP 372
I+V+F+ E TKAL L GR F R V T++ E + + P
Sbjct: 514 IYVKFDTPEAATKALQALAGRKFQDRTVVTTYFSEASYPNSNTRP 558
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E AKYG V + +
Sbjct: 459 KTETKPLPVNVN-MASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAKYGHVVHISL- 516
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F++ + A+ L+GR+FGGR++ A
Sbjct: 517 ---DPNSAGD----IYLKFDKVQGGENAIKGLNGRYFGGRMITA 553
>gi|322695060|gb|EFY86875.1| RNA recognition motif family protein [Metarhizium acridum CQMa 102]
Length = 374
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 271 NGPPTRVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
N R ++LR+M E+D+ E+++++ ECAK GTVT V++++ E
Sbjct: 266 NSKKDRTVILRHMFTLEELDEDPAALLEIKEDIRDECAKLGTVTSVVLYDQEEDGV---- 321
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD-EERFSKNE 369
+ V+F+ +E + + GR F GRVV A+ +E+F K++
Sbjct: 322 ---VSVRFKDTESAAACIKLMHGRSFDGRVVEASLKTGKEKFKKSD 364
>gi|341891946|gb|EGT47881.1| hypothetical protein CAEBREN_25972 [Caenorhabditis brenneri]
Length = 491
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVD-----DELEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T VL L NMV E+ +E+ ++V EC+KYG V + EI P PV
Sbjct: 389 GRATEVLCLMNMVTEDELKSDEDYEEILEDVREECSKYGIVRSL---EIPRPYDEHPVPG 445
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + +A L GR F R V ++YD +++ +
Sbjct: 446 VGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 491
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E AKYG V + +
Sbjct: 459 KTETKPLPVNVN-MASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAKYGHVVHISL- 516
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+PN D I+++F++ + A+ L+GR+FGGR++ A
Sbjct: 517 ---DPNSAGD----IYLKFDKVQGGENAIKGLNGRYFGGRMITA 553
>gi|326489276|dbj|BAK01621.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496413|dbj|BAJ94668.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 847
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 35/115 (30%)
Query: 138 RERREREERENASASRLNMSGEEAWKRRAAMSSGGVPPRSPSPPPVNVESGGGGGGFTIG 197
R RRE +ER+ SA KRR S G P P+PPP ++ES
Sbjct: 147 RARREEKERQQESA-----------KRRRGASGAGFEPGKPAPPPGSLESN--------- 186
Query: 198 KSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGV 252
T +MMA MG+K G+GLG+ QGIT P+ + AG+
Sbjct: 187 ---------------TKVAKMMAMMGYKRGEGLGKNAQGITAPVETTLRPKNAGL 226
>gi|384251973|gb|EIE25450.1| hypothetical protein COCSUDRAFT_65250 [Coccomyxa subellipsoidea
C-169]
Length = 542
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 269 NFNGPPTRVLLLRNMVGPGEV------DDELEDEVGSECAKYGTVTRVLIFEITEPNFPV 322
+ P ++L+ M P E+ D+LE +V +EC K G V +V +F+
Sbjct: 420 DLKNPTLVTVILKQMFHPNELIEEPSLKDDLETDVKTECTKLGAVDKVRVFQFHP----- 474
Query: 323 DEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
E V + V+F+ + + ++GRFFGGR V A +D
Sbjct: 475 -EGV-VSVKFKDEDAAQGCIKLMEGRFFGGRQVSAQLWD 511
>gi|330805047|ref|XP_003290499.1| hypothetical protein DICPUDRAFT_155008 [Dictyostelium purpureum]
gi|325079378|gb|EGC32981.1| hypothetical protein DICPUDRAFT_155008 [Dictyostelium purpureum]
Length = 365
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 20/98 (20%)
Query: 275 TRVLLLRNMVGPGE----------VDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
++ ++++N+ P E + +LEDE CAK G ++ + IFE + D
Sbjct: 247 SKTVIIKNLFSPSEAWEDPNFFNSLQADLEDETHG-CAKCGEISSIHIFE-----YNPDG 300
Query: 325 AVRI-FVQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V + F +FE +E AL +DGRFFGGR + A FYD
Sbjct: 301 VVSVKFKEFESAESCV-AL--MDGRFFGGRKLSADFYD 335
>gi|299745153|ref|XP_001831503.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|298406457|gb|EAU90350.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 550
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 22/110 (20%)
Query: 276 RVLLLRNMVGPGE-VDDE----LEDEVGSECAKYGTVTRVLI-------------FEITE 317
R+LL+ NMV P + +DDE L ++V EC+KYG V + I +I+
Sbjct: 416 RILLMLNMVTPDDLIDDEEYGDLYEDVKEECSKYGEVEDLRIPRPVKKDKAKWGEGQISA 475
Query: 318 PNFP-VDEAV---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
+ +DEA R++V++ +E KAL L GR F GR + AT EE
Sbjct: 476 QDAQRIDEAAGVGRVYVKYADTEGANKALNSLAGRSFAGRSIIATLLSEE 525
>gi|302781350|ref|XP_002972449.1| hypothetical protein SELMODRAFT_412839 [Selaginella moellendorffii]
gi|300159916|gb|EFJ26535.1| hypothetical protein SELMODRAFT_412839 [Selaginella moellendorffii]
Length = 345
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASEN 259
+AA R+M +MGW+EG GLG+ QGI L+ +K D AGV N + N
Sbjct: 5 SAAFRLMKQMGWEEGSGLGKDSQGIKKHLVVKKKDDTAGVGANETHN 51
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+ LLL+NM P + D++++++V EC+K+G + + + + F
Sbjct: 461 GVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFV-DKNSVGF------ 513
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++++FE ++ A L GR+F G+++ AT+ E +
Sbjct: 514 -VYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAY 551
>gi|296420976|ref|XP_002840043.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636253|emb|CAZ84234.1| unnamed protein product [Tuber melanosporum]
Length = 540
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV--- 326
+RVL L NMV E+ DE+ +++ EC K+G++ + ++ P+ +A
Sbjct: 440 SRVLQLLNMVTADELLDPEEYDEICEDIRDECQKFGSLVDM---KVPRPSGGSRQAAGVG 496
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+IFV+FE E + AL L GR F R V T++ EE +
Sbjct: 497 KIFVRFETQESASNALRSLAGRKFADRTVVCTYFSEENY 535
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+ LLL+NM P + D++++++V EC+K+G + + + + F
Sbjct: 460 GVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFV-DKNSVGF------ 512
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++++FE ++ A L GR+F G+++ AT+ E +
Sbjct: 513 -VYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAY 550
>gi|302805057|ref|XP_002984280.1| hypothetical protein SELMODRAFT_423398 [Selaginella moellendorffii]
gi|300148129|gb|EFJ14790.1| hypothetical protein SELMODRAFT_423398 [Selaginella moellendorffii]
Length = 345
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNASEN 259
+AA R+M +MGW+EG GLG+ QGI L+ +K D AGV N + N
Sbjct: 5 SAAFRLMKQMGWEEGSGLGKDSQGIKKHLVVKKKDDTAGVGANETHN 51
>gi|302511201|ref|XP_003017552.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
gi|291181123|gb|EFE36907.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
Length = 501
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ ++V EC+KYG V + +I P+ +A +
Sbjct: 395 RVLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEEL---KIPRPSAGSRQAAGVGK 451
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
I+V+F+ E TKAL L GR F R V T++ E + L
Sbjct: 452 IYVKFDSPESATKALQALAGRKFQDRTVVTTYFSEASHPNSNLC 495
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 15/104 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K +N N +R +LLRNM P E ELE++V SEC KYG V + +
Sbjct: 450 KTETKPLPINVN-MASRCVLLRNMFDPAEETGENWVKELEEDVRSECEKKYGHVVHISLD 508
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
++ + I+++F+R + A+ L+GR+FGG+ + A
Sbjct: 509 ASSQGD--------IYLKFDRVQGGENAIKGLNGRYFGGKQITA 544
>gi|168048203|ref|XP_001776557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672148|gb|EDQ58690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 267 SVNFNGPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFP 321
+V+ G P+ LLL+NM P + D +++D+V EC+K+G V + + +
Sbjct: 260 AVDAIGQPSEYLLLKNMFDPSTESDPDFDMDIKDDVQEECSKFGVVKHIFVDK------- 312
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+ A +++ F+ A L GR+F G+++ AT+
Sbjct: 313 -NSAGHVYLCFDSIAAAMAAQRALHGRWFAGKMITATY 349
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
++ +LL+NM P E D +L D+V EC KYG V + + + ++ I
Sbjct: 341 SKSVLLKNMFDPAEETEKDWDKDLADDVKVECENKYGMVNFIKVDKESQGE--------I 392
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+V+F+ + KA+ L+GR+FGGR V ATF
Sbjct: 393 YVKFDTVDSAKKAIEGLNGRYFGGRQVTATF 423
>gi|383125816|gb|AFG43490.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125818|gb|AFG43491.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125820|gb|AFG43492.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125822|gb|AFG43493.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125824|gb|AFG43494.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125826|gb|AFG43495.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125828|gb|AFG43496.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125830|gb|AFG43497.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125832|gb|AFG43498.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125834|gb|AFG43499.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125836|gb|AFG43500.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
Length = 93
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 284 VGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQT 338
V P E+ D+ E D++ EC K+G +T+++I V ++FV++ ++ +
Sbjct: 2 VNPDELLDDQEFEDIYDDMKEECGKHGEITKLVIPRPKSTGEEVPGVGKVFVEYANTQSS 61
Query: 339 TKALIDLDGRFFGGRVVRATFYDEERFS 366
KA L GR FGG VV A +Y E++FS
Sbjct: 62 AKARASLHGRKFGGNVVVAVYYPEDKFS 89
>gi|361128675|gb|EHL00605.1| putative RNA-binding protein rsd1 [Glarea lozoyensis 74030]
Length = 694
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 14/90 (15%)
Query: 275 TRVLLLRNMVGP-GEVDD----ELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
+R ++L++M P G+ +D ELEDEV +E AKYG V + I +PN D I
Sbjct: 592 SRCVVLKHMFDPTGQDNDDWIKELEDEVRAEAEAKYGHVVHIAI----DPNSDGD----I 643
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+++F+R + A+ L+GRFF GR + AT
Sbjct: 644 YLKFDRVQGGENAIKGLNGRFFDGRTINAT 673
>gi|242036887|ref|XP_002465838.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
gi|241919692|gb|EER92836.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
Length = 541
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
PP+ LLL+NM P + D ++ D+V EC+K+G + + + + T A
Sbjct: 445 APPSECLLLKNMFDPALETDPDFDLDIRDDVQEECSKFGQLKHIFVDKNT--------AG 496
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++++F+ A L GR+F G+++ ATF +++
Sbjct: 497 FVYLRFDSITAAMSAQKALHGRWFAGKMITATFMTPQQY 535
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+ LLL+NM P + D++++++V EC+K+G + + + + F
Sbjct: 320 GVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFV-DKNSVGF------ 372
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++++FE ++ A L GR+F G+++ AT+ E +
Sbjct: 373 -VYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAY 410
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+ LLL+NM P + D++++++V EC+K+G + + + + F
Sbjct: 510 GVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFV-DKNSVGF------ 562
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++++FE ++ A L GR+F G+++ AT+ E +
Sbjct: 563 -VYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAY 600
>gi|168028774|ref|XP_001766902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681881|gb|EDQ68304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 486
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 274 PTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV-- 326
PT+V+ L +V P +++D E+ +++G+EC KYGT+ +I P E V
Sbjct: 386 PTKVVALTEVVTPNQLEDDEEYQEIMEDMGTECGKYGTLVNCVI-----PRPRSGENVPG 440
Query: 327 --RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
++F+++ +KA L GR F +V A +Y E++F+ +
Sbjct: 441 LGKVFLEYSDIAGASKAKASLHGRRFDENLVVAVYYPEDKFAAGD 485
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+ LLL+NM P + D ++ D V EC K+G+VT + + + P F +F
Sbjct: 495 TQFLLLKNMFDPAQERDPEWQLDIRDTVLDECVKHGSVTHIFV-DANSPGF-------VF 546
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
++F E + GR+F G+++ A + E
Sbjct: 547 IKFSSVEACIAVQRTMHGRWFAGKLITADYVPE 579
>gi|1710361|gb|AAB38280.1| splicing factor U2AF65 [Caenorhabditis briggsae]
Length = 488
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVD-----DELEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T +L L NMV E+ +E+ ++V EC+KYG V + EI P + PV
Sbjct: 385 GRATEILCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVRSL---EIPRPYDDHPVPG 441
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + +A L GR F R V ++YD +++ +
Sbjct: 442 VGKVFVEFATTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 487
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LL+NM P E D EL +V EC +KYG +VL ++ + D I
Sbjct: 471 SRSVLLKNMFDPDEETEKDWDRELAQDVKGECESKYG---KVLAIKVEK-----DSQGEI 522
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+V+F+ + KA+ L+GR+FGGR V A F
Sbjct: 523 YVKFDSIDYAQKAIQGLNGRWFGGRQVSAVF 553
>gi|357113992|ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 551
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 271 NGPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA 325
PP+ LLL+NM P + D +++D+V EC+K+G + + + + T A
Sbjct: 454 TAPPSECLLLKNMFDPAVETDPDFDLDIKDDVREECSKFGQIRHIFVDKNT--------A 505
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++++F+ A L GR+F G+++ ATF +++
Sbjct: 506 GFVYLRFDSITAAMGAQKALQGRWFAGKMITATFMSPQQY 545
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+ LLL+NM P + D ++E++V EC+K+G + + + + F
Sbjct: 457 GVPSECLLLKNMFDPSTQTEDDFDKDIEEDVKEECSKFGNLNHIYV-DKNSVGF------ 509
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
++++FE ++ A L GR+F G+++ AT+
Sbjct: 510 -VYLRFENAQAAIGAQRALHGRWFAGKMITATY 541
>gi|302656965|ref|XP_003020217.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
gi|291184026|gb|EFE39599.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
Length = 486
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV---R 327
RVL L NMV E+ D E+ ++V EC+KYG V + +I P+ +A +
Sbjct: 395 RVLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEEL---KIPRPSAGSRQAAGVGK 451
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
I+V+F+ E TKAL L GR F R V T++ E
Sbjct: 452 IYVKFDSPESATKALQALAGRKFQDRTVVTTYFSE 486
>gi|148710216|gb|EDL42162.1| HIV TAT specific factor 1, isoform CRA_b [Mus musculus]
Length = 793
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++L+NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 301 RVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 353
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 354 VSFREPEEADHCIQTLDGRWFGGRQITAQAWD 385
>gi|354475309|ref|XP_003499872.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cricetulus griseus]
Length = 714
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ ECAK+G + ++L+F+ P A
Sbjct: 191 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECAKFGQIKKLLLFD----RHPDGVAS--- 243
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 244 VSFREPEEADYCIQTLDGRWFGGRQITAEAWD 275
>gi|115400045|ref|XP_001215611.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
gi|114191277|gb|EAU32977.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
Length = 413
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA---V 326
+RVL L NMV E+ D E+ ++V EC+KYG +VL ++ P+ ++
Sbjct: 318 SRVLQLLNMVTAEELIDNDDYEEICEDVREECSKYG---QVLELKVPRPSGGSRQSPGVG 374
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
+IFV+F+ E TKAL L GR F R V T+Y E
Sbjct: 375 KIFVKFDTVESATKALKALAGRKFSDRTVVTTYYGE 410
>gi|268575804|ref|XP_002642882.1| C. briggsae CBR-UAF-1 protein [Caenorhabditis briggsae]
gi|60415989|sp|P90727.2|U2AF2_CAEBR RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
Length = 488
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVD-----DELEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T +L L NMV E+ +E+ ++V EC+KYG V + EI P + PV
Sbjct: 385 GRATEILCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVRSL---EIPRPYDDHPVPG 441
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + +A L GR F R V ++YD +++ +
Sbjct: 442 VGKVFVEFATTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 487
>gi|302916595|ref|XP_003052108.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
gi|256733047|gb|EEU46395.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RVL L NMV E+ D E+ ++V EC+K+G + + I T + +IF
Sbjct: 451 SRVLQLLNMVTAEELLDNDDYEEICEDVKEECSKFGKIIDMKIPRPTGGSRQSAGVGKIF 510
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
V++E E TTKAL L GR F R V T++ E
Sbjct: 511 VKYETIEDTTKALKALAGRKFADRTVVTTYFPE 543
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+VL L +V E+ DD+ +D ++ EC K+G + V+I P ++F
Sbjct: 456 TKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVF 515
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+++ + ++KA L+GR FGG V A FY E +FS+ +
Sbjct: 516 LEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGD 555
>gi|322710224|gb|EFZ01799.1| G-patch domain containing protein [Metarhizium anisopliae ARSEF 23]
Length = 447
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 26/112 (23%)
Query: 210 GQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRR---------------AGVIV 254
GQ A R+M+K GW +G GLG E GI PL + RR G I+
Sbjct: 333 GQADFAHRLMSKYGWTQGTGLGANETGIINPLRVQVEKRRKKADADGGGWAEPGGKGRII 392
Query: 255 NASENKSEKKVKSVNFNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSEC 301
+ +S K G + V++L+NM+ E+ D L E+G EC
Sbjct: 393 GSKSKESASKF------GAMSDVIVLQNMLENMPDLQAEIADGLGQEIGEEC 438
>gi|50882018|gb|AAT85577.1| U2 small nuclear ribonucleoprotein auxiliary factor large subunit
[Alvinella pompejana]
Length = 479
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDELEDE-----VGSECAKYGTVTRVLIFEITEP--NFPVDE 324
GP T VL L NMV P +++DE E E V EC+KYG V + EI P V
Sbjct: 377 GPTTEVLCLMNMVTPEDLEDEEEYEEILEDVKEECSKYGYVKSI---EIPRPIKGVEVPG 433
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV+F KA L GR F RVV ++++D +R+ + E
Sbjct: 434 VGKIFVEFNSVIDCQKAQQALTGRKFSNRVVVSSYFDPDRYHRREF 479
>gi|23956212|ref|NP_082518.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|321267528|ref|NP_083647.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|81913100|sp|Q8BGC0.1|HTSF1_MOUSE RecName: Full=HIV Tat-specific factor 1 homolog
gi|22902415|gb|AAH37711.1| HIV TAT specific factor 1 [Mus musculus]
gi|26340228|dbj|BAC33777.1| unnamed protein product [Mus musculus]
gi|148710215|gb|EDL42161.1| HIV TAT specific factor 1, isoform CRA_a [Mus musculus]
Length = 757
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++L+NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 265 RVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 317
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 318 VSFREPEEADHCIQTLDGRWFGGRQITAQAWD 349
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LL+NM P E D EL +V EC +KYG +VL ++ + D I
Sbjct: 471 SRSVLLKNMFDPDEETEKDWDRELAQDVKGECESKYG---KVLAIKVEK-----DSQGEI 522
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+V+F+ + KA+ L+GR+FGGR V A F
Sbjct: 523 YVKFDSIDYAQKAIQGLNGRWFGGRQVSAVF 553
>gi|349802865|gb|AEQ16905.1| putative rna binding motif protein 17 [Pipa carvalhoi]
Length = 106
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV 254
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+
Sbjct: 51 TVAHKIMRKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKII 92
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
++ +L+RNM P E D +L ++V +EC AKYG V + + + +E I
Sbjct: 372 SKSVLMRNMFDPEEETEPAWDKDLAEDVKTECQAKYGRVQHIKVEKDSEGE--------I 423
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+VQF+ + A+ L+GR+FGG+ + ATF
Sbjct: 424 YVQFDTVDAAKAAINGLNGRWFGGKQISATF 454
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LL+NM P E D +L D+V SECA KYG V + + + T+ I
Sbjct: 252 SRSVLLKNMFNPEEETERDWDKDLADDVKSECATKYGPVQAIKVEKETQGE--------I 303
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+V FE + +A+ L+GR+FGGR + A F
Sbjct: 304 YVLFETVDAAGQAIEGLNGRWFGGRQISAAF 334
>gi|378734432|gb|EHY60891.1| hypothetical protein HMPREF1120_08835 [Exophiala dermatitidis
NIH/UT8656]
Length = 653
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 17/85 (20%)
Query: 175 PRSPSPPP----VNVESGGGGGGFTIGKSETSGLGLGAGGQM---TAAQRMMAKMGWKEG 227
P SP P P + E GG G G+ GG++ + A RMMAK G+ EG
Sbjct: 97 PASPDPAPDMSPLRQEKTGGTGPSAFGR----------GGKIQKNSFAARMMAKQGYVEG 146
Query: 228 QGLGRQEQGITTPLMARKTDRRAGV 252
QGLG+ QGIT P+ A+ RAG+
Sbjct: 147 QGLGKSGQGITAPIQAKVLQNRAGL 171
>gi|390352112|ref|XP_003727819.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 2
[Strongylocentrotus purpuratus]
gi|390352114|ref|XP_001198057.2| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1
[Strongylocentrotus purpuratus]
Length = 464
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+V++L+++ P E + ++++D+V EC+ YG V +VLIF+ P+ V
Sbjct: 285 QVIILKHVFHPSEFEEDAMLINDIKDDVKDECSTYGEVKKVLIFD-RHPDGVVS------ 337
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V+F+ E K + L+GR+F R + T +D
Sbjct: 338 VKFKDVENADKCIQSLNGRWFAKRKLEVTHWD 369
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 232 RQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV-- 289
R QGIT P + V+++A + + ++ + T++L L +V E+
Sbjct: 412 RANQGITQP-----NPEQESVLLHAQQQIALQRFM-LQPGALATKILCLTQVVSVDELKD 465
Query: 290 DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLD 346
DD+ +D ++ EC K+G + V+I P ++F+++ + ++KA L+
Sbjct: 466 DDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLN 525
Query: 347 GRFFGGRVVRATFYDEERFSKNE 369
GR FGG V A FY E +FS+ +
Sbjct: 526 GRKFGGNQVIAVFYPENKFSEGD 548
>gi|297277970|ref|XP_001091568.2| PREDICTED: splicing factor U2AF 65 kDa subunit [Macaca mulatta]
Length = 471
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 364 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 420
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 421 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
Length = 554
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 232 RQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV-- 289
R QGIT P + V+++A + + ++ + T++L L +V E+
Sbjct: 413 RANQGITQP-----NPEQESVLLHAQQQIALQRFM-LQPGALATKILCLTQVVSVDELKD 466
Query: 290 DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLD 346
DD+ +D ++ EC K+G + V+I P ++F+++ + ++KA L+
Sbjct: 467 DDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLN 526
Query: 347 GRFFGGRVVRATFYDEERFSKNE 369
GR FGG V A FY E +FS+ +
Sbjct: 527 GRKFGGNQVIAVFYPENKFSEGD 549
>gi|449669310|ref|XP_004206989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Hydra
magnipapillata]
Length = 480
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 275 TRVLLLRNMVGPGEV-DDELEDEVGS----ECAKYGTVTRVLIFEITEPN--FPVDEAVR 327
T +L L NMV E+ DDE DE+ EC+KYG R+ +I PN F V +
Sbjct: 380 TNILCLMNMVVAEELMDDEDYDEIFEDIREECSKYG---RIRSMQIPRPNNEFLVSGIGK 436
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+F+++ S ++ A L GR F RVV +YD + + +++ +
Sbjct: 437 VFIEYATSGESKVASEALAGRKFANRVVVTAYYDPDSYHRHDFS 480
>gi|294462032|gb|ADE76571.1| unknown [Picea sitchensis]
Length = 203
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P LLL+NM P + D +++++V EC+K+G V + + + A
Sbjct: 105 GVPNDCLLLKNMFDPNNETEPDFDLDIKEDVQDECSKFGAVRHIFVDK--------HSAG 156
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
++++F+ + A L GR+F G+++ ATF
Sbjct: 157 HVYLRFDSATSAIGAQRALHGRWFAGKMITATF 189
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 17/95 (17%)
Query: 278 LLLRNMVGPGEVD---------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
L+L NM P + + D +ED V EC+KYG++T++ + +D +I
Sbjct: 877 LVLCNMFSPNDENIGSDPDFFSDIIED-VKEECSKYGSITKIWM-----DTKNID--GKI 928
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
++++ + ++ KA L+GR+FGG ++ A F EE
Sbjct: 929 YIKYTKQDEAFKAFQFLNGRYFGGSLINAYFVTEE 963
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+ LLL+NM P + D++++++V EC+K+G + + + + F
Sbjct: 499 GVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFV-DKNSVGF------ 551
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++++FE ++ A L GR+F G+++ AT+ E +
Sbjct: 552 -VYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAY 589
>gi|9858779|gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
Length = 532
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+VL L +V E+ DD+ +D ++ EC K+G + V+I P ++F
Sbjct: 430 TKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVF 489
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+++ + ++KA L+GR FGG V A FY E +FS+ +
Sbjct: 490 LEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGD 529
>gi|119606813|gb|EAW86407.1| RNA binding motif protein 17, isoform CRA_c [Homo sapiens]
Length = 149
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 213 TAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIV 254
T A ++M K G++EGQGLG+ EQG++T L KT +R G I+
Sbjct: 68 TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKII 109
>gi|253756804|gb|ACT35159.1| Rbm10y [Monodelphis domestica]
Length = 900
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 178 PSPPPVNVESGGGGGGFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGI 237
P PP G T+G +++ GL + RM+ MGWKEG GLGR++QGI
Sbjct: 813 PDPPEPKKRKFGTMAATTVGLEQSTQHGLSSNN---IGSRMLQAMGWKEGSGLGRKKQGI 869
Query: 238 TTPLMAR 244
TP+ A
Sbjct: 870 ITPIEAH 876
>gi|157818333|ref|NP_001101729.1| HIV-1 Tat specific factor 1 [Rattus norvegicus]
gi|149015808|gb|EDL75132.1| HIV TAT specific factor 1 (predicted) [Rattus norvegicus]
Length = 776
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++L+NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFREPEEADNCIQTLDGRWFGGRQITAQAWD 348
>gi|302412845|ref|XP_003004255.1| RNA-binding protein rsd1 [Verticillium albo-atrum VaMs.102]
gi|261356831|gb|EEY19259.1| RNA-binding protein rsd1 [Verticillium albo-atrum VaMs.102]
Length = 227
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
KSE K VN N +R ++L NM P E + ELED+V E +KYG V + +
Sbjct: 115 KSETKPLPVNVN-MASRCVVLHNMFDPEEEEGEDWAKELEDDVRQEAESKYGRVVHISV- 172
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 173 ---DPNSKGD----IYLKFDKVQGGENAIKGLNGRYFGGRMIDAS 210
>gi|41055136|ref|NP_957497.1| HIV TAT specific factor 1 [Danio rerio]
gi|33417205|gb|AAH55565.1| HIV TAT specific factor 1 [Danio rerio]
Length = 450
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+V++++NM P + + +E D++ +EC K+G V +V+IF+ P+
Sbjct: 268 KVIIIQNMFHPTDFEEDPLVLNEYRDDLRTECEKFGQVKKVIIFD-RHPDGVAS------ 320
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F+ E+ + L+GR+FGGR + A +D
Sbjct: 321 VAFKEPEEADACQVALNGRWFGGRKLSALLWD 352
>gi|339243511|ref|XP_003377681.1| splicing factor U2AFsubunit [Trichinella spiralis]
gi|316973494|gb|EFV57074.1| splicing factor U2AFsubunit [Trichinella spiralis]
Length = 402
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 273 PPTRVLLLRNMVGPGEV------DDELEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
P T +L L NMV E+ DD +ED + EC KYG+V V EI P V
Sbjct: 301 PATEILCLMNMVVAEELVDNEEYDDIVED-IKEECCKYGSVKSV---EIPRPIEGLDVPG 356
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + KA L GR F RVV +++D + + + +
Sbjct: 357 VGKVFVEFGTVMECQKAQQALTGRKFANRVVVTSYFDPDLYHRRQF 402
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LL+NM P E D EL D+V EC +KYG V+ + + + T+ I
Sbjct: 317 SRSVLLKNMFDPEEESGDDWDKELADDVKGECESKYGKVSAIKVEKETQGE--------I 368
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+V+F+ + KA+ L+GR+FGG+ V A F
Sbjct: 369 YVKFDAVDAARKAVQGLNGRWFGGKQVSAAF 399
>gi|357156009|ref|XP_003577312.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 576
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYG + + +I PV ++
Sbjct: 473 PTKVVCLTQVVSADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAPVPGVGKV 532
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F+++ + +TKA + GR FGG V A FY E +F++ +
Sbjct: 533 FLEYLDVDGSTKAKTGMHGRKFGGNQVVAVFYPENKFAEGDY 574
>gi|115618688|ref|XP_793195.2| PREDICTED: HIV Tat-specific factor 1 homolog [Strongylocentrotus
purpuratus]
Length = 462
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+V++L+++ P E + ++++D+V EC+ YG V +VLIF+ P+ V
Sbjct: 283 QVIILKHVFHPSEFEEDAMLINDIKDDVKDECSTYGEVKKVLIFD-RHPDGVVS------ 335
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V+F+ E K + L+GR+F R + T +D
Sbjct: 336 VKFKDVENADKCIQSLNGRWFAKRKLEVTHWD 367
>gi|298713809|emb|CBJ27181.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1141
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 263 KKVKSVNFNGPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITE 317
K+V+ N PT V+ L NMV E+ D E++ +V EC +YG V E+
Sbjct: 939 KEVEDEQDNVEPTCVVRLSNMVEVEELADDTEYAEIKGDVVEECEQYGKVKSA---EVPR 995
Query: 318 PN--FPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFY 360
P V IFV+FE TK L GR FGG+ V+AT+Y
Sbjct: 996 PEDGKEVLGLGEIFVEFEDVAGATKGRNALAGRKFGGKAVKATYY 1040
>gi|426244214|ref|XP_004015921.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Ovis aries]
Length = 471
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC KYG V + EI P
Sbjct: 364 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSI---EIPRPVDGV 420
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 421 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|335310331|ref|XP_003361983.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Sus scrofa]
Length = 362
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
V+IFV+F + +T KA+ L+GR+F GR V A YD+ERF ++L+
Sbjct: 316 VKIFVEFSVASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLS 361
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEV--DD---ELEDEVGSECA-KYGTVTRVLIF 313
K+E K VN N +R ++L NM P E DD ELEDEV E +YG V + +
Sbjct: 459 KTETKPLPVNVN-MASRCVVLHNMFDPTEEEGDDWVKELEDEVRQEAEERYGHVVHISV- 516
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 517 ---DPNSKGD----IYLKFDKVQGGENAIKGLNGRYFGGRMIDAS 554
>gi|384252245|gb|EIE25721.1| hypothetical protein COCSUDRAFT_64802 [Coccomyxa subellipsoidea
C-169]
Length = 581
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGE-VDDELEDEV----GSECAKYGTVTRVLIFEITEPN-----FP 321
G PT+ L + MV P VDDE EV EC+KYG V RVL+ P F
Sbjct: 474 GAPTQYLQVTGMVTPDVLVDDEEYSEVIQDLQEECSKYGQVLRVLVPRPPNPAASNELFG 533
Query: 322 VDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
+ + F +F + A + GR F G V+AT+ E F++
Sbjct: 534 SNNYGKAFAEFADVSGCSAAKAAIHGRLFAGETVQATYVTAEYFAQ 579
>gi|403264917|ref|XP_003924710.1| PREDICTED: HIV Tat-specific factor 1 homolog [Saimiri boliviensis
boliviensis]
Length = 792
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 312 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 364
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F+ E+ + LDGR+FGGR + A +D
Sbjct: 365 VSFQDPEEADYCIQTLDGRWFGGRQITAQAWD 396
>gi|452841884|gb|EME43820.1| hypothetical protein DOTSEDRAFT_71600 [Dothistroma septosporum
NZE10]
Length = 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 276 RVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
RVL L NM+ P E+ DE+ ++V ECAKYG + V + T + + +I++
Sbjct: 334 RVLSLMNMITPEELMDPDEADEILEDVKEECAKYGPLLDVKMPRPTGGSRQSNGIGKIYL 393
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
++E +E KAL L GR F R V T++ EE F N
Sbjct: 394 KYESTESAAKALAALAGRKFADRTVVVTYFGEEYFDVN 431
>gi|417410850|gb|JAA51891.1| Putative splicing factor u2af large subunit rrm superfamily,
partial [Desmodus rotundus]
Length = 455
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 348 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 404
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 405 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 454
>gi|224003073|ref|XP_002291208.1| U2 snRNP auxillary splicing factor, U2AF subunit [Thalassiosira
pseudonana CCMP1335]
gi|220972984|gb|EED91315.1| U2 snRNP auxillary splicing factor, U2AF subunit, partial
[Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 275 TRVLLLRNMV-----GPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
TR+L+L NMV E LE+EV E KYGT+ + I E P +IF
Sbjct: 252 TRILVLLNMVMDEDLATAEDRKFLEEEVREEVGKYGTLLSMKIPMPHEGCAP-SAVKKIF 310
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+++ + A +L GR FG VV A+++ EE ++KN+L+
Sbjct: 311 LEYATPAEAMYAEKELKGRAFGPNVVDASYFSEEDYAKNQLS 352
>gi|145509627|ref|XP_001440752.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407980|emb|CAK73355.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 13/96 (13%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+V++L NM E+ + EL++EV +EC KYG V V + + E N V +F
Sbjct: 441 TKVIVLTNMWTELEISNQAAIVELKEEVENECKKYGDVEMVWVDKKNEGNVIV-----VF 495
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
Q+E ++Q + ++ R FG +VV++ F E +F
Sbjct: 496 KQWEAAKQVN---VLMNNRKFGNKVVQSYFITESQF 528
>gi|410351437|gb|JAA42322.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 368 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 424
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 425 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
RVL L NMV E+ D E+ ++V EC K+G + + I + +I+V
Sbjct: 470 RVLQLLNMVTADELLDQEEYEEILEDVTDECNKFGPIIDIKIPRPSGNQRAAAGVGKIYV 529
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+FE E KAL L GR F R V +++ EE +
Sbjct: 530 RFEEHESAEKALKSLAGRKFADRTVIVSYFSEENY 564
>gi|417404468|gb|JAA48986.1| Putative transcription elongation factor tat-sf1 [Desmodus
rotundus]
Length = 766
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIKKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRNPEEADHCIQTLDGRWFGGRQITAQAWD 348
>gi|6005926|ref|NP_009210.1| splicing factor U2AF 65 kDa subunit isoform a [Homo sapiens]
gi|267188|sp|P26368.4|U2AF2_HUMAN RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=hU2AF(65);
Short=hU2AF65; AltName: Full=U2 snRNP auxiliary factor
large subunit
gi|37545|emb|CAA45409.1| splicing factor U2AF [Homo sapiens]
gi|380783065|gb|AFE63408.1| splicing factor U2AF 65 kDa subunit isoform a [Macaca mulatta]
gi|410212804|gb|JAA03621.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260574|gb|JAA18253.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291504|gb|JAA24352.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 368 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 424
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 425 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E +KYG V + +
Sbjct: 456 KTETKPLPVNVN-MASRCVVLHNMFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHISV- 513
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 514 ---DPNSKGD----IYLKFDKVQGGENAIKGLNGRYFGGRMIDAS 551
>gi|164659450|ref|XP_001730849.1| hypothetical protein MGL_1848 [Malassezia globosa CBS 7966]
gi|159104747|gb|EDP43635.1| hypothetical protein MGL_1848 [Malassezia globosa CBS 7966]
Length = 549
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 18/92 (19%)
Query: 277 VLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVR---I 328
+LLR+M P E + +L ++V +EC ++GTV V VD + R +
Sbjct: 466 AILLRHMFDPAEETEPHWHVDLREDVRAECERHGTVESVF----------VDTSSRDGEV 515
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFY 360
+V F ++ +A L GRFFGG+ V A+ Y
Sbjct: 516 YVCFATTDDAQRARASLQGRFFGGKRVEASLY 547
>gi|63101571|gb|AAH94451.1| U2af2 protein, partial [Mus musculus]
Length = 403
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 296 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 352
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 353 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 402
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Query: 268 VNFNGPPTRVLLLRNMVGPGE-----VDDELEDEVGSEC-AKY-GTVTRVLIFEITEPNF 320
+N TR +LL+N P E D L+++V +EC +K+ G V ++++ +
Sbjct: 442 INIKSQETRCILLKNAFDPAEETDPDWDKNLQEDVVAECESKFQGRVEKIVVEK------ 495
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
D I++Q + + +A+ +LDGR+FGGR + A++
Sbjct: 496 --DSKGEIYIQCDSIDMAKRAVANLDGRWFGGRQISASY 532
>gi|344247059|gb|EGW03163.1| HIV Tat-specific factor 1-like [Cricetulus griseus]
Length = 528
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ ECAK+G + ++L+F+ P+
Sbjct: 5 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECAKFGQIKKLLLFD-RHPDGVAS------ 57
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 58 VSFREPEEADYCIQTLDGRWFGGRQITAEAWD 89
>gi|221501588|gb|EEE27358.1| polyadenylate-binding protein, putative [Toxoplasma gondii VEG]
Length = 400
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 274 PTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFE 333
P+ +++L+N++ E+DD+++DE+ EC K+G V V + + + VR F ++
Sbjct: 307 PSTLIVLKNLMEVAELDDDVKDEIYQECLKHGKVVEVRVHVVAST-----QEVRAFALYQ 361
Query: 334 RSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
EQ +A+ L+ R F R V+ YD +S+
Sbjct: 362 LPEQANRAVRVLNERSFAKRKVKCELYDMAAYSQ 395
>gi|212723502|ref|NP_001131562.1| uncharacterized protein LOC100192903 [Zea mays]
gi|194691860|gb|ACF80014.1| unknown [Zea mays]
gi|195646366|gb|ACG42651.1| splicing factor U2AF 65 kDa subunit [Zea mays]
gi|413920213|gb|AFW60145.1| Splicing factor U2AF subunit [Zea mays]
Length = 539
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYG + +V+I PV ++
Sbjct: 436 PTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVIIPRPDPSGQPVVGVGKV 495
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + KA L GR FGG V A Y E++F+ E
Sbjct: 496 FLEYADIDGAAKAKTALHGRKFGGNPVVAVCYAEDKFANGE 536
>gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=large
Length = 475
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 368 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 424
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 425 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|410351435|gb|JAA42321.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 471
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 364 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 420
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 421 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|219116422|ref|XP_002179006.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409773|gb|EEC49704.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 274 PTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PTRVL+L NMV ++ + E DEV ECAK+G + R+ EI A ++
Sbjct: 229 PTRVLVLHNMVTDEDLATDTEYQGLFDEVKDECAKFGRLERL---EIPRQG---PAARKV 282
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
F+ + + +A +L GR FG VV+ TF+ E F L
Sbjct: 283 FLGYVTVAEAMQAQHELQGRQFGPNVVQTTFFPESEFEAGRL 324
>gi|402906865|ref|XP_003916203.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Papio anubis]
Length = 446
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 339 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 395
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 396 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 445
>gi|327365322|ref|NP_001192160.1| splicing factor U2AF 65 kDa subunit isoform 1 [Mus musculus]
gi|348551789|ref|XP_003461711.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 2 [Cavia
porcellus]
gi|392343893|ref|XP_003748811.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Rattus norvegicus]
gi|136628|sp|P26369.3|U2AF2_MOUSE RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|55101|emb|CAA45874.1| splicing factor U2AF [Mus musculus]
gi|26347321|dbj|BAC37309.1| unnamed protein product [Mus musculus]
Length = 475
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 368 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 424
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 425 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|1334149|emb|CAA45875.1| unnamed protein product [Mus musculus]
Length = 492
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 385 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 441
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 442 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 491
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 18/95 (18%)
Query: 275 TRVLLLRNMVGPGEVDD---------ELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDE 324
+R +LLRNM E+++ EL D+V EC KYG V F EP D
Sbjct: 544 SRSVLLRNMFKEPELEEKENGPNWAKELTDDVKQECEDKYGLVD----FIKLEP----DS 595
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
++++F+ E +KA+ L+GR+FGG+ ++ATF
Sbjct: 596 QGEMYLKFKSIEAASKAIEGLNGRYFGGQPIQATF 630
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LL+NM P E D EL D+V EC KYG V + + T+ I
Sbjct: 356 SRSVLLKNMFDPEEETERDWDKELADDVKVECENKYGKVEAIKVERETQGE--------I 407
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+++F+ E +A+ L+GR+FGGR V A F
Sbjct: 408 YLKFDSIESAKQAIQGLNGRWFGGRQVSAAF 438
>gi|309266895|ref|XP_003086891.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial [Mus
musculus]
Length = 493
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGP-----GEVDDELEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E +E+ D+V EC KYG V + EI P
Sbjct: 386 VQMGGHPTTVLCLMNMVLPKELLDDEEYEEIVDDVRDECNKYGLVKSI---EIPRPMDGV 442
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
V +IFV+F KA+ L GR F RVV + D + +
Sbjct: 443 EVPGCGKIFVEFTSVIDCQKAMQGLTGRKFANRVVVTKYCDPDSYH 488
>gi|410982179|ref|XP_003997437.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Felis catus]
Length = 471
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 364 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 420
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 421 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|344270173|ref|XP_003406920.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa
subunit-like [Loxodonta africana]
Length = 471
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 364 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 420
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 421 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|327280715|ref|XP_003225097.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 456
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 349 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGVVKSI---EIPRPVDGV 405
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 406 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 455
>gi|60279268|ref|NP_001012496.1| splicing factor U2AF 65 kDa subunit isoform b [Homo sapiens]
gi|164565377|ref|NP_598432.2| splicing factor U2AF 65 kDa subunit isoform 2 [Mus musculus]
gi|109461136|ref|XP_001060115.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 6 [Rattus
norvegicus]
gi|338709958|ref|XP_001496159.3| PREDICTED: splicing factor U2AF 65 kDa subunit [Equus caballus]
gi|348551787|ref|XP_003461710.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 1 [Cavia
porcellus]
gi|359318549|ref|XP_003638845.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Canis lupus
familiaris]
gi|395861318|ref|XP_003802936.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Otolemur garnettii]
gi|397471087|ref|XP_003807136.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Pan paniscus]
gi|403308602|ref|XP_003944746.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Saimiri boliviensis
boliviensis]
gi|14250571|gb|AAH08740.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|27695339|gb|AAH43071.1| U2af2 protein [Mus musculus]
gi|39644972|gb|AAH30574.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|119592810|gb|EAW72404.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_c [Homo
sapiens]
gi|148699339|gb|EDL31286.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2,
isoform CRA_a [Mus musculus]
gi|149016700|gb|EDL75886.1| similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b
[Rattus norvegicus]
gi|261858294|dbj|BAI45669.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|325463253|gb|ADZ15397.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|380783067|gb|AFE63409.1| splicing factor U2AF 65 kDa subunit isoform b [Macaca mulatta]
gi|389618965|gb|AFK92990.1| U2 small nuclear RNA auxiliary factor 2 [Sus scrofa]
gi|410212802|gb|JAA03620.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260572|gb|JAA18252.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291502|gb|JAA24351.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|431902970|gb|ELK09152.1| Splicing factor U2AF 65 kDa subunit [Pteropus alecto]
Length = 471
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 364 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 420
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 421 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|189308116|gb|ACD86942.1| UAF-1 [Caenorhabditis brenneri]
Length = 108
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVD-----DELEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T VL L NMV E+ +E+ ++V EC+KYG V + EI P PV
Sbjct: 6 GRATEVLCLMNMVTEDELKSDEDYEEILEDVREECSKYGIVRSL---EIPRPYDEHPVPG 62
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + +A L GR F R V ++YD +++ +
Sbjct: 63 VGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 108
>gi|410989518|ref|XP_004001008.1| PREDICTED: HIV Tat-specific factor 1 homolog [Felis catus]
Length = 780
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ ECAK+G + ++L+F+ P A
Sbjct: 278 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECAKFGQIRKLLLFD----RHPDGVAS--- 330
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 331 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 362
>gi|308801273|ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
Length = 388
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 290 DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLD 346
D+E E+ ++ EC KYG + V+I ++ V ++FV++E E TKA L+
Sbjct: 305 DEEFENIMEDMNEECGKYGKIISVVIPRPSKSGESVTGIGKVFVRYESVEDATKARDALN 364
Query: 347 GRFFGGRVVRATFYDEERFS 366
GR FGG V A F D E F+
Sbjct: 365 GRRFGGNSVVADFIDIESFA 384
>gi|334311921|ref|XP_001368201.2| PREDICTED: HIV Tat-specific factor 1-like [Monodelphis domestica]
Length = 555
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV+++RNM P + + +E+ +++ SEC K+G V +VL+F+ P+
Sbjct: 376 RVVIIRNMFHPKDFEADPLVLNEIREDLRSECEKFGQVKKVLVFD-RHPDGVAS------ 428
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V ++ E+ + L+GR+FGGR + +D
Sbjct: 429 VSYKEPEEADLCIQALNGRWFGGRQLNVEVWD 460
>gi|335306576|ref|XP_003360505.1| PREDICTED: HIV Tat-specific factor 1 homolog [Sus scrofa]
Length = 760
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFREPEEADYCIQTLDGRWFGGRQITAEAWD 348
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LL+NM P E D +L D+V EC KYG +VL ++ + D I
Sbjct: 488 SRSVLLKNMFNPEEETEQNWDKDLADDVKGECENKYG---KVLAIKVEK-----DSQGEI 539
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
+V+F+ + A+ L+GR+FGGR + A F
Sbjct: 540 YVKFDTVDTAKSAVQGLNGRWFGGRQISANF 570
>gi|327280717|ref|XP_003225098.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 467
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 360 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGVVKSI---EIPRPVDGV 416
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 417 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 466
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E +KYG V + +
Sbjct: 458 KTETKPLPVNVN-MASRCVVLHNMFDPEEEEGEDWAKELEDDVRQEAESKYGRVVHISV- 515
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 516 ---DPNSKGD----IYLKFDKVQGGENAIKGLNGRYFGGRMIDAS 553
>gi|197692223|dbj|BAG70075.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
gi|197692475|dbj|BAG70201.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
Length = 471
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 364 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 420
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 421 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEV--DD---ELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E DD ELED+V E KYG V + +
Sbjct: 453 KTETKPLPVNVN-MASRCVVLHNMFDPEEEEGDDWVKELEDDVRQEAETKYGRVVHISV- 510
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 511 ---DPNSKGD----IYLKFDKVQGGENAIRGLNGRYFGGRMIDAS 548
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEV--DD---ELEDEVGSECAK-YGTVTRVLIF 313
K+E K VN N +R ++L NM P E DD ELED++ +E + YG V + +
Sbjct: 446 KTEAKPLPVNVN-MASRCVVLHNMFDPEEEEGDDWVKELEDDIRAEAERQYGHVVHIAV- 503
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D ++++F++ + A+ L+GR+FGGR++ A+
Sbjct: 504 ---DPNSKGD----VYLKFDKVQGGENAIKGLNGRYFGGRMINAS 541
>gi|336262820|ref|XP_003346192.1| hypothetical protein SMAC_05729 [Sordaria macrospora k-hell]
gi|380093521|emb|CCC08484.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 438
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 272 GPPTRVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA 325
G +V++LR+M E+++ E++D++ ECAK G VT V++F+ E
Sbjct: 327 GKWDKVVILRHMFTLEELNEDPAALLEIKDDIREECAKLGPVTNVVLFDQEEEGI----- 381
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD-EERFSKNE 369
+ V+F E + + GR F GR+V A F +ERF K++
Sbjct: 382 --VSVKFATVEAAEACVHLMHGRAFDGRIVEAFFATGKERFKKSK 424
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 14/90 (15%)
Query: 275 TRVLLLRNMVGPGE-----VDDELEDEVGSECA-KYGTVTRVLIFEITEPNFPVDEAVRI 328
+R +LLRNM P E D +L D+V EC KYG V + + + +E I
Sbjct: 308 SRCVLLRNMFDPDEETERDWDKDLADDVRGECEEKYGKVLDLKVEKESEGE--------I 359
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+++FE E KA+ L+GR+FGG+ V A+
Sbjct: 360 YIKFESVESAEKAIKGLNGRWFGGKQVTAS 389
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEV--DD---ELEDEVGSECAK-YGTVTRVLIF 313
K+E K VN N +R ++L NM P E DD ELED++ +E + YG V + +
Sbjct: 450 KTEAKPLPVNVN-MASRCVVLHNMFDPEEEEGDDWVKELEDDIRAEAERQYGHVVHIAV- 507
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D ++++F++ + A+ L+GR+FGGR++ A+
Sbjct: 508 ---DPNSKGD----VYLKFDKVQGGENAIKGLNGRYFGGRMINAS 545
>gi|145494510|ref|XP_001433249.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400366|emb|CAK65852.1| unnamed protein product [Paramecium tetraurelia]
Length = 535
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 13/96 (13%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+V++L NM E+ + EL++EV +EC KYG + V + + E N V +F
Sbjct: 443 TKVIVLTNMWTDLEISNQAAIVELKEEVENECKKYGEIEMVWVDKKNEGNVIV-----VF 497
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
Q+E ++Q + ++ R FG +VV++ F E +F
Sbjct: 498 KQWEAAKQVN---VLMNNRKFGNKVVQSYFITESQF 530
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 13/94 (13%)
Query: 278 LLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
L+L NM + +D E+E++V EC KYGTV +V + + P+ +++V+
Sbjct: 551 LVLSNMYTSADYEDNREFFDEIEEDVKEECGKYGTVIQVFVNK-RNPD------GKVYVK 603
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
F+ ++ A L GR+F G ++ ++ ++++
Sbjct: 604 FKNNDDAQAANKSLQGRYFAGNTIQVSYISDDQY 637
>gi|66808005|ref|XP_637725.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466159|gb|EAL64222.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 671
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 271 NGPPTRVLLLRNMVGPGEVDDELEDE-----VGSECAKYGTVTRVLIFEITEPNFPVDEA 325
N P+ V+ + N+V ++ D+ E + V EC ++G V + + P+ E
Sbjct: 564 NTKPSCVIQILNLVDREDIFDDKEYDNILIDVKEECEQFGEVQSIWL---PLPSKNPLEV 620
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKN 368
R++V+F + E KA + L GR + GRV+ + +Y E+ F KN
Sbjct: 621 TRVYVEFSQVEFAQKACLALGGRKYNGRVLFSAYYPEDLFFKN 663
>gi|325179530|emb|CCA13927.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 833
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 277 VLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
VL + NMV E+ ++ L+++V EC ++GT+ L ++ + IFV+
Sbjct: 735 VLRMANMVSEDELKNDEEFADLKEDVEEECKRFGTII-ALDIPRSQDGEEIAGTGNIFVR 793
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+ +++ T A L GR FGG VV+ T++ +F E +
Sbjct: 794 YSDTKEATAAQKALCGRKFGGNVVKVTYFSLSKFEAKEYS 833
>gi|224097256|ref|XP_002189273.1| PREDICTED: HIV Tat-specific factor 1 homolog [Taeniopygia guttata]
Length = 451
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
R++++RNM P + + +E+ +++ +EC K+G V +VLIF+ P A
Sbjct: 267 RIIIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFD----RHPDGVAS--- 319
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F+ + + + L+GR+FGGR + A +D
Sbjct: 320 VSFKEATEADLCKLTLNGRWFGGRQLSAETWD 351
>gi|148697816|gb|EDL29763.1| mCG68163 [Mus musculus]
Length = 472
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 24/189 (12%)
Query: 193 GFTIGKSETSGLGLG-AGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAG 251
F + K +GL G A + + W G LG ++ L+ ++ A
Sbjct: 288 AFNLVKDSITGLSKGYAFCEYMDINVTDQAIAWLNGMHLGDKK------LLVQRASVGAK 341
Query: 252 VIVNASENKSEKKVK-------SVNFNGPPTRVLLLRNMVGP-----GEVDDELEDEVGS 299
+ + N++ ++ V G PT VL L NMV P E +E+ D+V
Sbjct: 342 NVALSIINQTPVTLQVPGLTSSQVQMGGHPTTVLCLMNMVLPKELLDDEEYEEIVDDVRD 401
Query: 300 ECAKYGTVTRVLIFEITEP--NFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA 357
EC KYG V + EI P V +IFV+F KA+ L GR F RVV
Sbjct: 402 ECNKYGLVKSI---EIPRPMDGVEVPGCGKIFVEFTSVIDCQKAMQGLTGRKFANRVVVT 458
Query: 358 TFYDEERFS 366
+ D + +
Sbjct: 459 KYCDPDSYH 467
>gi|95007474|emb|CAJ20696.1| RNA binding protein, putative [Toxoplasma gondii RH]
Length = 317
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 271 NG-PPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
NG P+ +++L+N++ E+DD+++DE+ EC K+G V E+ + VR F
Sbjct: 220 NGDAPSTLIVLKNLMEVAELDDDVKDEIYQECLKHGKVV-----EVRVHVVASTQEVRAF 274
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
++ EQ +A+ L+ R F R V+ YD +S+
Sbjct: 275 ALYQLPEQANRAVRVLNERSFAKRKVKCELYDMAAYSQ 312
>gi|393236224|gb|EJD43774.1| hypothetical protein AURDEDRAFT_137718 [Auricularia delicata
TFB-10046 SS5]
Length = 389
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 19/107 (17%)
Query: 275 TRVLLLRNMVGPGE-VDDE----LEDEVGSECAKYGTVTRVLIFEITEPNFP-------- 321
R+LL+ NMV P + VDDE L ++V ECAK+G V + I + P
Sbjct: 254 ARILLMLNMVVPEDLVDDEEFAELYEDVKEECAKFGAVEDLRIPRPAKRAGPKYGPAAVE 313
Query: 322 ---VDEAV---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
VDEA R++V++ +S + AL L GR F GR + A+ E
Sbjct: 314 AQRVDEAAGVGRVYVKYYKSSDASTALRSLAGRSFAGRSIIASLLSE 360
>gi|348526424|ref|XP_003450719.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 475
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P V
Sbjct: 372 GLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSI---EIPRPVDGLEVPG 428
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV+F + KA+ L GR F RVV + D + + + +
Sbjct: 429 TGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 474
>gi|444724150|gb|ELW64768.1| Splicing factor U2AF 65 kDa subunit [Tupaia chinensis]
Length = 447
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 340 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 396
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 397 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 446
>gi|348526426|ref|XP_003450720.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 487
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P V
Sbjct: 384 GLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSI---EIPRPVDGLEVPG 440
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV+F + KA+ L GR F RVV + D + + + +
Sbjct: 441 TGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 486
>gi|431891353|gb|ELK02229.1| HIV Tat-specific factor 1 like protein [Pteropus alecto]
Length = 786
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 263 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 315
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 316 VSFRDPEEADYCIQTLDGRWFGGRQITAQVWD 347
>gi|301782083|ref|XP_002926459.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 496
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P
Sbjct: 389 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI---EIPRPVDGV 445
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 446 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 495
>gi|115496604|ref|NP_001068804.1| splicing factor U2AF 65 kDa subunit [Bos taurus]
gi|89994093|gb|AAI14161.1| U2 small nuclear RNA auxiliary factor 2 [Bos taurus]
gi|296477253|tpg|DAA19368.1| TPA: U2 (RNU2) small nuclear RNA auxiliary factor 2 [Bos taurus]
Length = 475
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E+ D+ + ++V EC KYG V + EI P
Sbjct: 368 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSI---EIPRPVDGV 424
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 425 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|397623851|gb|EJK67169.1| hypothetical protein THAOC_11833 [Thalassiosira oceanica]
Length = 436
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 11/103 (10%)
Query: 274 PTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
P+ V+ LR+M+ ++DD+ E ++ EC+ +GT+ ++I P A +I
Sbjct: 339 PSPVVELRHMLTQQDLDDDNEYNDILEDTRDECSSFGTLKNIVIPR-KGPG-----ATKI 392
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
F+++ +E KA+ L GR F GR V A ++D +F+ + +
Sbjct: 393 FLEYMTAEDAGKAIAGLAGRTFDGRKVTAVYFDTVKFANEDYS 435
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
+R ++++NM P + + +LED+V +EC AKYG V + + +PN D +
Sbjct: 448 SRCVVVKNMFDPTQEEGDAWVKDLEDDVKAECEAKYGHVVHISV----DPNSGGD----V 499
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRA 357
+++FE+ A+ L+GRFFGGR + A
Sbjct: 500 YIKFEKIVGGENAIKGLNGRFFGGRQISA 528
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGP-----GEVDDELEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E +E+ D+V EC KYG V + EI P
Sbjct: 623 VQMGGHPTTVLCLMNMVLPKELLDDEEYEEIVDDVRDECNKYGLVKSI---EIPRPMDGV 679
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
V +IFV+F KA+ L GR F RVV + D + +
Sbjct: 680 EVPGCGKIFVEFTSVIDCQKAMQGLTGRKFANRVVVTKYCDPDSYH 725
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 19/122 (15%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEV--DD---ELEDEVGSECA-KYGTVTRVLIF 313
++E K +N +R ++L NM P E DD ELE++V E KYG V + +
Sbjct: 451 RTEVKPLPINNVNQASRCVVLHNMFDPAEEEGDDWVKELEEDVRQEAEEKYGHVVHISL- 509
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRA-----TFYDEERFSKN 368
+PN D I+++F+R + A+ L+GR+FGGR++ A FY ++ + N
Sbjct: 510 ---DPNSQGD----IYLKFDRVQGGENAIKGLNGRYFGGRMITAAPVVDAFYSKQCTNPN 562
Query: 369 EL 370
L
Sbjct: 563 RL 564
>gi|118390069|ref|XP_001028025.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila]
gi|89309795|gb|EAS07783.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila SB210]
Length = 480
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 270 FNGPPTRVLLLRNMVG-----PGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE 324
F P+RV+ L NMV ++ D+L +V +EC K G V ++ EI +P
Sbjct: 369 FTSLPSRVIQLLNMVSIEDLFEDDIVDDLYQDVMTECEKIGPVEKI---EIPKPCKTTGI 425
Query: 325 A----VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F+ + KA L+GR + R V A+FY E++F + +
Sbjct: 426 CPPCIGKVFVKFKYMLKAKKARYSLNGRTYNRRTVIASFYPEDKFDRKDF 475
>gi|357160098|ref|XP_003578657.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 534
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 252 VIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGT 306
+++ A KK+ PT+V+ L +V ++ D+E +D ++ E KYG
Sbjct: 409 ILLQAQHQAQMKKLVYEVGGAIPTKVVCLTQVVSEDDLRNDEEYKDILEDMTFEGRKYGN 468
Query: 307 VTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFS 366
+ + +I PV ++F+++ + +T A + GR F G+VV A FY E++F+
Sbjct: 469 LVQAVIPRPHPNGVPVAGVGKVFLEYADVDGSTNAKAGMHGRRFDGKVVDAVFYPEKKFA 528
Query: 367 KNEL 370
E
Sbjct: 529 DGEY 532
>gi|308477324|ref|XP_003100876.1| CRE-UAF-1 protein [Caenorhabditis remanei]
gi|308264450|gb|EFP08403.1| CRE-UAF-1 protein [Caenorhabditis remanei]
Length = 496
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G T +L L NMV E+ +E+ ++V EC+KYG V + EI P PV
Sbjct: 394 GRATEILCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVRSL---EIPRPYDEQPVPG 450
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++FV+F + +A L GR F R V ++YD +++ +
Sbjct: 451 VGKVFVEFATTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 496
>gi|53131339|emb|CAG31810.1| hypothetical protein RCJMB04_11k6 [Gallus gallus]
Length = 450
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
R++++RNM P + + +E+ +++ +EC K+G V +VLIF+ P+
Sbjct: 266 RIVIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFD-RHPDGVAS------ 318
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F+ + + + L+GR+FGGR + A +D
Sbjct: 319 VSFKEATEADLCKLTLNGRWFGGRQLSAETWD 350
>gi|392572624|gb|EIW65769.1| hypothetical protein TREMEDRAFT_41238 [Tremella mesenterica DSM
1558]
Length = 596
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 24/119 (20%)
Query: 271 NGPPTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLI---------FEIT 316
+GP +RV+LL NMV E+ D E+ +++ SEC+++G + V + +E +
Sbjct: 446 SGPTSRVMLLLNMVTADELYDDQEYQEILEDITSECSRFGEIEGVRVPRPVPKSKKWEPS 505
Query: 317 EPNFPVDEAVR----------IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
E E R +FV ++ T KA+ L GR FGGR + EE F
Sbjct: 506 ESAVVTQERARRADLAAGVGRVFVMYKDLASTEKAMNSLGGRQFGGRTIVVANVPEEEF 564
>gi|145513991|ref|XP_001442906.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410267|emb|CAK75509.1| unnamed protein product [Paramecium tetraurelia]
Length = 545
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 13/96 (13%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+V++L NM E+ + EL++EV +EC KYG V V + + E N + +F
Sbjct: 453 TKVIVLTNMWTDLEISNQAAIVELKEEVENECKKYGDVEMVWVDKKNEGNVII-----VF 507
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
Q+E ++Q + ++ R FG ++V++ F E +F
Sbjct: 508 KQWEAAKQVN---VLMNNRKFGNKIVQSYFITESQF 540
>gi|118089467|ref|XP_001233032.1| PREDICTED: HIV Tat-specific factor 1 homolog [Gallus gallus]
Length = 450
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
R++++RNM P + + +E+ +++ +EC K+G V +VLIF+ P+
Sbjct: 266 RIVIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFD-RHPDGVAS------ 318
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F+ + + + L+GR+FGGR + A +D
Sbjct: 319 VSFKEATEADLCKLTLNGRWFGGRQLSAETWD 350
>gi|291336146|gb|ADD95726.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C161]
Length = 301
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 212 MTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS---ENKSEK 263
M+ A ++M KMGW+EG+GLG+ + GI PL +K R G IV + +KSEK
Sbjct: 235 MSMAMKLMKKMGWEEGKGLGKNQDGIDAPLAVKKDGRDTGRIVQSKALFSSKSEK 289
>gi|260836212|ref|XP_002613100.1| hypothetical protein BRAFLDRAFT_125707 [Branchiostoma floridae]
gi|229298484|gb|EEN69109.1| hypothetical protein BRAFLDRAFT_125707 [Branchiostoma floridae]
Length = 400
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV+++RNM P + + +E+ D++ SEC K+G V +VLIF+ P+
Sbjct: 248 RVMIIRNMFHPKDFEEDPLELNEISDDLRSECEKFGIVKKVLIFD-RHPDGVAS------ 300
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V ++ +E A+ L+GR+FGGR + +D
Sbjct: 301 VAYKEAEMADAAVAALNGRWFGGRQLNVALWD 332
>gi|85111692|ref|XP_964058.1| hypothetical protein NCU02633 [Neurospora crassa OR74A]
gi|28925820|gb|EAA34822.1| hypothetical protein NCU02633 [Neurospora crassa OR74A]
Length = 432
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 272 GPPTRVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA 325
G +V++LR+M E+++ E++D++ ECAK G VT V++F+ E
Sbjct: 323 GKWDKVVILRHMFTLEELNEDPAALLEIKDDIREECAKLGPVTNVVLFDEEEEGI----- 377
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD-EERFSKNE 369
+ V+F E + + GR F GR+V A F +ERF K++
Sbjct: 378 --VSVKFATVEAAEACVHLMHGRAFDGRIVEAFFATGKERFRKSK 420
>gi|350296885|gb|EGZ77862.1| hypothetical protein NEUTE2DRAFT_154421 [Neurospora tetrasperma
FGSC 2509]
Length = 496
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 272 GPPTRVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA 325
G +V++LR+M E+++ E++D++ ECAK G VT V++F+ E
Sbjct: 387 GKWDKVVILRHMFTLEELNEDPAALLEIKDDIREECAKLGPVTNVVLFDEEEEGI----- 441
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD-EERFSKNE 369
+ V+F E + + GR F GR+V A F +ERF K++
Sbjct: 442 --VSVKFATVEAAEACVHLMHGRAFDGRIVEAFFATGKERFRKSK 484
>gi|412985637|emb|CCO19083.1| hypothetical protein Bathy12g01330 [Bathycoccus prasinos]
Length = 315
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 212 MTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGVIVNAS---ENKSEK 263
M+ A ++M KMGW+EG+GLG+ + GI PL +K R G IV + +KSEK
Sbjct: 249 MSMAMKLMKKMGWEEGKGLGKNQDGIDAPLAVKKDGRDTGRIVQSKALFSSKSEK 303
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 278 LLLRNMVGPG------EVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQ 331
L+L NM E DE+E++V EC KYGTV +V + P+ +++V+
Sbjct: 550 LVLSNMYTSADYADNHEFFDEIEEDVKEECGKYGTVVQVFV-NRRNPD------GKVYVK 602
Query: 332 FERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
F+ ++ A L GR+F G ++ ++ ++++
Sbjct: 603 FKNNDDAQSANKSLQGRYFAGNTIQVSYISDDQY 636
>gi|224003373|ref|XP_002291358.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973134|gb|EED91465.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 99
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
TRV+ L++M+ +++D E+ ++ EC+ +GT+ ++I N P A +IF
Sbjct: 3 TRVVELKHMLTQQDLEDDNEYNEILEDTRDECSSFGTLKNIII----PRNGP--GATKIF 56
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELA 371
+++ +E KA+ L GR F GR V A +DE +F+ + +
Sbjct: 57 LEYMTNEDAAKAIAGLAGRTFDGRQVTAVCFDEIKFANEDYS 98
>gi|327286675|ref|XP_003228055.1| PREDICTED: HIV Tat-specific factor 1-like [Anolis carolinensis]
Length = 533
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGE------VDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV+++RNM P + V +E+ +++ SEC K+G V +V+IF+ P+
Sbjct: 350 RVIIIRNMFHPKDFEEDPLVLNEIREDLRSECEKFGQVKKVIIFD-RHPDGVAS------ 402
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F+ +E+ LDGR+FGGR + +D
Sbjct: 403 VSFKEAEEADVCKQALDGRWFGGRQLSVETWD 434
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 272 GPPTRVLLLRNMVGPGE-----VDDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
G P+ L+L+NM P + D +++++V +EC+K+G + + + + + A
Sbjct: 499 GVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAECSKFGALKHIYVDKKS--------AG 550
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATF 359
++++FE ++ A L GR+F G+++ A+F
Sbjct: 551 FVYLRFEDTQSAISAQQALHGRWFAGKMITASF 583
>gi|348526428|ref|XP_003450721.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 458
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P V
Sbjct: 355 GLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSI---EIPRPVDGLEVPG 411
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV+F + KA+ L GR F RVV + D + + + +
Sbjct: 412 TGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 457
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K E K VN N +R ++L NM P E + ELED+V E +KYG V + +
Sbjct: 456 KMETKPLPVNVN-MASRCVVLHNMFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHISV- 513
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 514 ---DPNSKGD----IYLKFDKVQGGENAIKGLNGRYFGGRMIDAS 551
>gi|358338608|dbj|GAA57078.1| splicing factor U2AF large subunit [Clonorchis sinensis]
Length = 518
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPG-----EVDDELEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
GPPT VL L NM+ P E +++ ++V +EC+KYG V + EI P V
Sbjct: 416 GPPTEVLCLMNMIDPAELEDDEEYEDIVEDVRAECSKYGVVRSL---EIPRPIRGVEVPG 472
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+I+V+F KA L GR F R+V +F++ + + + E
Sbjct: 473 VGKIYVEFASLIDCQKAATALTGRKFNQRLVVTSFFNPDNYHRREF 518
>gi|336464786|gb|EGO53026.1| hypothetical protein NEUTE1DRAFT_133528 [Neurospora tetrasperma
FGSC 2508]
Length = 496
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 272 GPPTRVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA 325
G +V++LR+M E+++ E++D++ ECAK G VT V++F+ E
Sbjct: 387 GKWDKVVILRHMFTLEELNEDPAALLEIKDDIREECAKLGPVTNVVLFDEEEEGI----- 441
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD-EERFSKNE 369
+ V+F E + + GR F GR+V A F +ERF K++
Sbjct: 442 --VSVKFATVEAAEACVHLMHGRAFDGRIVEAFFATGKERFRKSK 484
>gi|47221657|emb|CAF97922.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G PT VL L NMV P E+ D+ + ++V EC+KYG V + EI P V
Sbjct: 355 GVPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSI---EIPRPVDGLEVPG 411
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV+F + KA+ L GR F RVV + D + + + +
Sbjct: 412 TGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 457
>gi|322693990|gb|EFY85833.1| splicing factor, putative [Metarhizium acridum CQMa 102]
Length = 584
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 276 RVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFV 330
RVL L NMV P E+ D E+ ++V EC+K+G + + I + +IFV
Sbjct: 474 RVLQLLNMVTPEELMDTEEYEEICEDVREECSKFGNILELKIPRPVGGSRQSAGVGKIFV 533
Query: 331 QFERSEQTTKALIDLDGRFFGGRVVRATFYDE 362
+F+ + KAL L GR F R V T++ E
Sbjct: 534 KFDTPDSCHKALTALAGRKFADRTVVTTYFPE 565
>gi|344277364|ref|XP_003410472.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Loxodonta
africana]
Length = 471
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 268 VNFNGPPTRVLLLRNMVGP-----GEVDDELEDEVGSECAKYGTVTRVLIFEITEP--NF 320
V G PT VL L NMV P E +E+ ++V EC+KYG V + EI P
Sbjct: 364 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIMEDVREECSKYGLVKSM---EIPRPVDGV 420
Query: 321 PVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
V +IFV+F KA+ L GR F RVV + D + + +
Sbjct: 421 EVPGCGKIFVEFTTVFDCQKAMQGLTGRKFANRVVVTKYCDLDSYHHRDF 470
>gi|224134362|ref|XP_002327819.1| predicted protein [Populus trichocarpa]
gi|222836904|gb|EEE75297.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAV-R 327
PT+V+ L +V E+ DDE ED ++ +E K+G + V+I PN V +
Sbjct: 438 PTKVVCLTQVVTGDELKDDDEYEDILEDMRTEAGKFGLLVNVVIPR-PRPNGENAPGVGK 496
Query: 328 IFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
+F+++ +E ++KA ++GR F G V A FY E +FS+ E
Sbjct: 497 VFLEYADTEGSSKARAGMNGRKFDGNQVVAVFYPENKFSQGE 538
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 232 RQEQGITTPLMARKTDRRAGVIVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEV-D 290
R QG+T P +++ V+++A + + +K+ + T+VL L +V E+ D
Sbjct: 432 RANQGVTQPKPEQES-----VLLHAQQQIALQKLM-LQPGTLATKVLCLTQVVSADELRD 485
Query: 291 DE-----LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDL 345
DE LED + EC K+ T+ ++I + P ++F+++ E KA L
Sbjct: 486 DEDYADILED-MRLECGKF-TLVNLVIPRPSPTGDPTPGVGKVFLEYADVESANKARQGL 543
Query: 346 DGRFFGGRVVRATFYDEERFSKNE 369
GR FGG V A FY E RFS+ +
Sbjct: 544 HGRRFGGNQVVAVFYPENRFSQGD 567
>gi|302414782|ref|XP_003005223.1| splicing factor U2AF-associated protein [Verticillium albo-atrum
VaMs.102]
gi|261356292|gb|EEY18720.1| splicing factor U2AF-associated protein [Verticillium albo-atrum
VaMs.102]
Length = 210
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
R+++LR+M E+++ E++++V ECAK G VT V++F+ EP+ V
Sbjct: 108 RLVVLRHMFTLAELEEDPAALLEIKEDVREECAKLGAVTNVVLFD-EEPDGVVS------ 160
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATF 359
V+F + + +DGR F GRV+ A+
Sbjct: 161 VKFREPQAAQACIAMMDGRSFDGRVIEASL 190
>gi|344297715|ref|XP_003420542.1| PREDICTED: HIV Tat-specific factor 1 homolog [Loxodonta africana]
Length = 743
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++++F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIKKLILFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIHTLDGRWFGGRQITAEAWD 348
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 14/90 (15%)
Query: 275 TRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIFEITEPNFPVDEAVRI 328
+R ++L NM P E D ELED+V E KYG V + + +PN D I
Sbjct: 473 SRCVVLHNMFDPEEEDGDDWAKELEDDVRQEAEKKYGRVVHIAV----DPNSKGD----I 524
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 525 YLKFDKVQGGENAIRGLNGRYFGGRMIDAS 554
>gi|209882250|ref|XP_002142562.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558168|gb|EEA08213.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 261
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
Query: 275 TRVLLLRNMVGPGEV-----DD----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA 325
TR+++LR+M + DD ELEDE+ E +K+GTV V + P
Sbjct: 158 TRIVVLRHMYSKQDAEKFNEDDLFYKELEDEIYEEVSKFGTVINV-------TSIPRHPH 210
Query: 326 VRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
+ V+F++SE A+ L+ RFF GR + A YD
Sbjct: 211 GIVCVKFKKSEDAEIAVSYLNNRFFDGRQIEAFLYD 246
>gi|403413555|emb|CCM00255.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
Query: 269 NFNGPPTRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLI----------- 312
+ G R+LL+ NMV P ++ D+ E ++V EC+KYG V + I
Sbjct: 441 DVEGTDARILLMLNMVVPEDLTDDQEYADVYEDVKEECSKYGLVEDLRIPRPVKRDKAKW 500
Query: 313 ----FEITEPNFPVDEAV---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
E +DEA R++V+F S +AL L GR F GR + AT E+
Sbjct: 501 GEGGHESAITAQRIDEAAGVGRVYVKFTESYSAAQALKALAGRSFAGRSIIATLLSED 558
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E KYG V + +
Sbjct: 453 KTETKPLPVNVN-MASRCVVLHNMFDPEEEEGDEWVKELEDDVRQEAETKYGRVVHISV- 510
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 511 ---DPNSKGD----IYLKFDKVQGGENAIRGLNGRYFGGRMIDAS 548
>gi|194387946|dbj|BAG61386.1| unnamed protein product [Homo sapiens]
Length = 721
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|291408295|ref|XP_002720372.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 1 [Oryctolagus
cuniculus]
Length = 770
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIKKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAEAWD 348
>gi|62088186|dbj|BAD92540.1| HIV TAT specific factor 1 variant [Homo sapiens]
Length = 758
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 267 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 319
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 320 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 351
>gi|332246954|ref|XP_003272619.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Nomascus
leucogenys]
Length = 754
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|397482309|ref|XP_003812372.1| PREDICTED: HIV Tat-specific factor 1 [Pan paniscus]
gi|410211494|gb|JAA02966.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410261782|gb|JAA18857.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410304122|gb|JAA30661.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410333195|gb|JAA35544.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
Length = 755
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|291408297|ref|XP_002720373.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 2 [Oryctolagus
cuniculus]
Length = 752
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIKKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAEAWD 348
>gi|159471948|ref|XP_001694118.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158277285|gb|EDP03054.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 446
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 274 PTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVD----E 324
PT ++LL NMV G + D E+ D+V +E K G V + P P E
Sbjct: 274 PTAIVLLENMVTCGTIRDDTERKEILDDVRAEVVKCGAV-----LGLAAPMPPAHVTNAE 328
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
A R++V+F +E+ + +DGR F VRA F E F + +
Sbjct: 329 ASRVYVKFGSAEEAGRCRNMMDGRKFDDNSVRAIFVTEAEFLRAQ 373
>gi|197102050|ref|NP_001125576.1| HIV Tat-specific factor 1 homolog [Pongo abelii]
gi|75070769|sp|Q5RB63.1|HTSF1_PONAB RecName: Full=HIV Tat-specific factor 1 homolog
gi|55728510|emb|CAH90997.1| hypothetical protein [Pongo abelii]
Length = 754
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specific factor 1 [synthetic construct]
gi|60653905|gb|AAX29645.1| HIV TAT specific factor 1 [synthetic construct]
gi|60653907|gb|AAX29646.1| HIV TAT specific factor 1 [synthetic construct]
Length = 756
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|406699650|gb|EKD02849.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Trichosporon asahii var. asahii CBS 8904]
Length = 487
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 273 PPTRVLLLRNMVGPGEVDDE------LEDEVGSECAKYGTVTRVLI-------------- 312
P TRV+L+ NMVG E+ D+ LED + EC+K+G V V I
Sbjct: 344 PATRVILMLNMVGADELYDDQDYADILED-IRDECSKFGEVEGVRIPRPVPKSTKWEPSD 402
Query: 313 --FEITEPNFPVDE---AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
+ E N +D+ R++V + +E KA+ L GR F GR + EE F
Sbjct: 403 SAAQTAEKNRRIDQENGVGRVYVMYADTESAVKAMRALGGRQFAGRTILVASCSEEDF 460
>gi|340506650|gb|EGR32741.1| u2 snrnp auxilliary splicing factor, putative [Ichthyophthirius
multifiliis]
Length = 276
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 254 VNASENKSEKKVKSV-NFNGPPTRVLLLRNMVGP-----GEVDDELEDEVGSECAKYGTV 307
+ +N+ +K+ S+ + P+RV+ L NM P ++ +E+ +V SEC K G +
Sbjct: 148 CHLIKNEFVRKMLSIPEYTYQPSRVIQLLNMCSPEDLFEDDIYNEIYQDVQSECEKIGPI 207
Query: 308 TRVLIFEITEPNFPVD----EAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
+V EI P +IFV+F+ + +A L+GR + R V A+FY EE
Sbjct: 208 EKV---EIVRPCKMTGICPPSVGKIFVKFKYLLKAKRARHVLNGRTYNKRTVVASFYPEE 264
Query: 364 RFSKNEL 370
+F E
Sbjct: 265 KFDCKEF 271
>gi|21361437|ref|NP_055315.2| HIV Tat-specific factor 1 [Homo sapiens]
gi|253970456|ref|NP_001156752.1| HIV Tat-specific factor 1 [Homo sapiens]
gi|74754346|sp|O43719.1|HTSF1_HUMAN RecName: Full=HIV Tat-specific factor 1; Short=Tat-SF1
gi|14602772|gb|AAH09896.1| HIV-1 Tat specific factor 1 [Homo sapiens]
gi|30582611|gb|AAP35532.1| HIV TAT specific factor 1 [Homo sapiens]
gi|61362248|gb|AAX42186.1| HIV TAT specific factor 1 [synthetic construct]
gi|119608874|gb|EAW88468.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|119608875|gb|EAW88469.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|157929022|gb|ABW03796.1| HIV-1 Tat specific factor 1 [synthetic construct]
Length = 755
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|156404394|ref|XP_001640392.1| predicted protein [Nematostella vectensis]
gi|156227526|gb|EDO48329.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 275 TRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDE---AV 326
T VL L NMV P E+ D E+ D+V EC+KYG RV EI P + E
Sbjct: 231 TEVLALMNMVTPDELGDDEEFEEIYDDVREECSKYG---RVKSMEIPRPMEGLMEPPGVG 287
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSK 367
+IFV+F + KA L GR F RVV ++Y E + +
Sbjct: 288 KIFVEFSSIDDAKKAAAALGGRKFANRVVVTSYYPPEEYHR 328
>gi|355757742|gb|EHH61267.1| hypothetical protein EGM_19235 [Macaca fascicularis]
Length = 754
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|307111213|gb|EFN59448.1| hypothetical protein CHLNCDRAFT_138015 [Chlorella variabilis]
Length = 567
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 273 PPTRVLLLRNMVGPGEV------DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAV 326
P ++L++M PGE+ DELE ++ SEC K G V ++ +F P V
Sbjct: 440 PQQVTVILKHMFEPGELVESPALKDELETDIRSECGKLGKVDKLRVF-AAHPQGVVS--- 495
Query: 327 RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V+F E + + ++GRFFGGR + A +D
Sbjct: 496 ---VKFTTLEAADECVRVMNGRFFGGRQLEAAKWD 527
>gi|297304889|ref|XP_001082302.2| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Macaca
mulatta]
gi|355705198|gb|EHH31123.1| hypothetical protein EGK_20983 [Macaca mulatta]
Length = 754
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|321260434|ref|XP_003194937.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Cryptococcus gattii WM276]
gi|317461409|gb|ADV23150.1| Splicing factor (U2 snRNP auxiliary factor large subunit), putative
[Cryptococcus gattii WM276]
Length = 654
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 269 NFNGPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLI----------- 312
N + P +RV+LL NMV P E+ DD+ D ++ EC+KYG + V I
Sbjct: 489 NADAPTSRVMLLLNMVTPEELYNDDDYNDIIEDINDECSKYGEIEGVRIPRPVPKSKKWE 548
Query: 313 -----FEITEPNFPVDEAV---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
E N D+ R++V ++ E T KA+ + GR F GR + EE
Sbjct: 549 STEAAAATAERNKRTDDEAGVGRVYVMYKDVESTKKAMDAIGGRQFAGRTILVANVPEEE 608
Query: 365 F 365
F
Sbjct: 609 F 609
>gi|426397566|ref|XP_004064985.1| PREDICTED: HIV Tat-specific factor 1 [Gorilla gorilla gorilla]
Length = 755
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|345807273|ref|XP_538183.3| PREDICTED: HIV Tat-specific factor 1 homolog [Canis lupus
familiaris]
Length = 768
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|405121398|gb|AFR96167.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 655
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 269 NFNGPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLI----------- 312
N + P +RV+LL NMV P E+ DD+ D ++ EC+KYG + V I
Sbjct: 490 NADAPSSRVMLLLNMVTPEELYNDDDYNDIIEDINDECSKYGEIEGVRIPRPVPKSKKWE 549
Query: 313 -----FEITEPNFPVDEAV---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
E N D+ R++V ++ E T KA+ + GR F GR + EE
Sbjct: 550 STEAAAATAERNKRTDDEAGVGRVYVMYKDVESTKKAMNAIGGRQFAGRTILVANVPEEE 609
Query: 365 F 365
F
Sbjct: 610 F 610
>gi|58268792|ref|XP_571552.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|57227787|gb|AAW44245.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 651
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 269 NFNGPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLI----------- 312
N + P +RV+LL NMV P E+ DD+ D ++ EC+KYG + V I
Sbjct: 486 NADAPSSRVMLLLNMVTPEELYNDDDYNDIIEDINEECSKYGEIEGVRIPRPVPKSKKWE 545
Query: 313 -----FEITEPNFPVDEAV---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
E N D+ R++V ++ E T KA+ + GR F GR + EE
Sbjct: 546 STEAAAATAERNKRTDDEAGVGRVYVMYKDVESTKKAMNAIGGRQFAGRTILVANVPEEE 605
Query: 365 F 365
F
Sbjct: 606 F 606
>gi|134113282|ref|XP_774666.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257310|gb|EAL20019.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 652
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 269 NFNGPPTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLI----------- 312
N + P +RV+LL NMV P E+ DD+ D ++ EC+KYG + V I
Sbjct: 487 NADAPSSRVMLLLNMVTPEELYNDDDYNDIIEDINEECSKYGEIEGVRIPRPVPKSKKWE 546
Query: 313 -----FEITEPNFPVDEAV---RIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEER 364
E N D+ R++V ++ E T KA+ + GR F GR + EE
Sbjct: 547 STEAAAATAERNKRTDDEAGVGRVYVMYKDVESTKKAMNAIGGRQFAGRTILVANVPEEE 606
Query: 365 F 365
F
Sbjct: 607 F 607
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 260 KSEKKVKSVNFNGPPTRVLLLRNMVGPGEVD-----DELEDEVGSEC-AKYGTVTRVLIF 313
K+E K VN N +R ++L NM P E + ELED+V E +KYG V +
Sbjct: 454 KTETKPLPVNVN-MASRCVVLHNMFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHI--- 509
Query: 314 EITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRAT 358
+PN D I+++F++ + A+ L+GR+FGGR++ A+
Sbjct: 510 -SADPNSKGD----IYLKFDKVQGGENAIKGLNGRYFGGRMIDAS 549
>gi|258568972|ref|XP_002585230.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906676|gb|EEP81077.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 310
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 193 GFTIGKSETSGLGLGAGGQMTAAQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGV 252
I + S LG G + A +K Q +++ + +KT R
Sbjct: 94 NLAIQMLDDSDFRLGETGPQGKMKVQQADFSFKAQQEAPQKQNTRDKAKIIKKTQRLKNK 153
Query: 253 IVNASENKSEKKVKSVNFNGPPTRVLLLRNMVGPGEVDDE------LEDEVGSECAKYGT 306
+ + E+ + ++ G +V++LR+M E++D+ +++++ EC+K G
Sbjct: 154 LADWDEDDA----ATLQPTGRWEKVVILRHMFTLAELEDDPAAILDIKEDIRDECSKLGE 209
Query: 307 VTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYD-EERF 365
VT V++++ E + V+F+ E + ++GRFFGG V A D ERF
Sbjct: 210 VTNVVLYDKEESGV-------VTVRFKDPEAAQACVEMMNGRFFGGTKVEAYIADGRERF 262
Query: 366 SKN 368
K+
Sbjct: 263 RKS 265
>gi|224125466|ref|XP_002329812.1| predicted protein [Populus trichocarpa]
gi|222870874|gb|EEF08005.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEVDD-----ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
P++VL L + + D E+ +++ EC K+GT+ V+I ++ + A ++
Sbjct: 193 PSKVLCLTEAIAMEVLADDEEYEEILEDMREECCKFGTLINVVIPRPSQTEEQISGAGKV 252
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + A L+GR FGG V A++Y E+++ +
Sbjct: 253 FLEYSDTSSCANARNALNGRKFGGNTVNASYYPEDKYHNGD 293
>gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens]
Length = 754
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|296236526|ref|XP_002763352.1| PREDICTED: HIV Tat-specific factor 1 homolog [Callithrix jacchus]
Length = 744
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+
Sbjct: 265 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVAS------- 317
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 318 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 349
>gi|413920211|gb|AFW60143.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 367
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 274 PTRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRI 328
PT+V+ L +V E+ D+E ED ++ E KYG + +V+I PV ++
Sbjct: 264 PTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVIIPRPDPSGQPVVGVGKV 323
Query: 329 FVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNE 369
F+++ + KA L GR FGG V A Y E++F+ E
Sbjct: 324 FLEYADIDGAAKAKTALHGRKFGGNPVVAVCYAEDKFANGE 364
>gi|325187363|emb|CCA21901.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 174
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 215 AQRMMAKMGWKEGQGLGRQEQGITTPLMARKTDRRAGV 252
A R M KMGWKEG+GLG++E+G+T + RK D G+
Sbjct: 34 ALRQMQKMGWKEGKGLGKREEGVTCSIRVRKRDESVGI 71
>gi|301769097|ref|XP_002919964.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ailuropoda
melanoleuca]
Length = 767
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|320590609|gb|EFX03052.1| splicing factor u2af large subunit [Grosmannia clavigera kw1407]
Length = 420
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 275 TRVLLLRNMVGPGEV--DDELED---EVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+RV+ L NMV E+ +D+ ED +V ECAK+G V + + +IF
Sbjct: 175 SRVVQLLNMVTAEELVNNDDYEDICEDVTEECAKFGPVMGLKVPRPASGGRHSPGVGKIF 234
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V+F+ + TKAL L GR F R V AT++ EE F
Sbjct: 235 VKFDSRDSATKALKALAGRKFSDRTVVATYFPEENF 270
>gi|255931767|ref|XP_002557440.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582059|emb|CAP80223.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 554
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+VL L NMV E+ +E+ ++VG EC+K+G + + I A +IF
Sbjct: 460 TQVLQLLNMVTLDELLNDEDYEEILEDVGEECSKFGKMIGIKIPRRGHG------AGKIF 513
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++++ +E T AL L GR F R V A+++ E F
Sbjct: 514 IKYDTAESATNALKALAGRKFSDRTVVASYFSVENF 549
>gi|440900150|gb|ELR51345.1| Splicing factor U2AF 65 kDa subunit, partial [Bos grunniens mutus]
Length = 411
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 268 VNFNGPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEPNFPV 322
V G PT VL L NMV P E+ D+ + ++V EC KYG V + I +
Sbjct: 303 VQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSIEIPRQAWVFTSL 362
Query: 323 DEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
++IFV+F KA+ L GR F RVV + D + + + +
Sbjct: 363 ILFLQIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 410
>gi|410915234|ref|XP_003971092.1| PREDICTED: HIV Tat-specific factor 1 homolog [Takifugu rubripes]
Length = 439
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVD------DELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
+V+++RNM P + + +E +++ EC K+G V +V++F+ P A
Sbjct: 274 KVVIIRNMFHPSDFEEDPLVLNEYREDLRVECEKFGAVKKVILFD----RHPDGVAS--- 326
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F+ ++ + +GR+FGGR + A F+D
Sbjct: 327 VAFKEPDEADACIQSFNGRWFGGRQLSAQFWD 358
>gi|313244346|emb|CBY15154.1| unnamed protein product [Oikopleura dioica]
Length = 347
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 94 STVIEEYDPARPNDYEDYRREKKKKAVDAEIRRELERRRQEGEERERREREERENASASR 153
S +EYDP +PN++ Y R ++ E + ++ R ++ + +ER + R+N +
Sbjct: 106 SRYQDEYDPIKPNEFSRYLRRRR------EGKHKVTRYAEQKKSQERDYK--RQNPKSDS 157
Query: 154 LNMSGEEAWKRRAAMSSGGV---PPRS--------PSPPPVNVESGGGGGGFTIGKSETS 202
+ EE KR+ AM G PP + P+ P G T +++T
Sbjct: 158 DSSEDEEKSKRQKAMGMGKAMIAPPSALYAGQSSMPNMPAAKNPDLGALSSKTASRTKTL 217
Query: 203 G--LGLG--------------------------------AGGQMTAAQRMMAKMGWKEGQ 228
G LG G A + A+R+M K G KEG
Sbjct: 218 GSKLGFGQPKPSLFGKSVPSTPQFWTPSSQQPVKTVEQGAADAKSIAERIMEKYGHKEGA 277
Query: 229 GLGRQEQGITTPLMARKTDRRAGVIV 254
GLG+ QGI PL KT RR G IV
Sbjct: 278 GLGKSGQGIAAPLEVEKTSRRGGKIV 303
>gi|403300078|ref|XP_003940786.1| PREDICTED: HIV Tat-specific factor 1 homolog [Saimiri boliviensis
boliviensis]
Length = 743
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P A
Sbjct: 264 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD----RHPDGVAS--- 316
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 317 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 348
>gi|425773483|gb|EKV11835.1| Splicing factor u2af large subunit [Penicillium digitatum Pd1]
Length = 585
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 275 TRVLLLRNMVGPGEV-----DDELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+VL L NMV E+ +E+ ++V EC+K+GT+ + I A +IF
Sbjct: 491 TQVLQLLNMVTLDELLNDEDYEEIMEDVSDECSKFGTILGIKIPRRGHG------AGKIF 544
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
++++ +E T AL L GR F R V A+++ E F
Sbjct: 545 IKYDAAESATNALKALAGRKFSDRTVVASYFGVENF 580
>gi|410905623|ref|XP_003966291.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Takifugu
rubripes]
Length = 458
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 272 GPPTRVLLLRNMVGPGEVDDE-----LEDEVGSECAKYGTVTRVLIFEITEP--NFPVDE 324
G PT VL L NMV P E+ D+ + ++V EC KYG V + EI P V
Sbjct: 355 GVPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECGKYGQVKSI---EIPRPVDGLEVPG 411
Query: 325 AVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNEL 370
+IFV+F + KA+ L GR F RVV + D + + + +
Sbjct: 412 TGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 457
>gi|402911564|ref|XP_003918392.1| PREDICTED: HIV Tat-specific factor 1 homolog [Papio anubis]
Length = 645
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 276 RVLLLRNMVGPGEVDD------ELEDEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
RV++++NM P + +D E+ +++ EC+K+G + ++L+F+ P+
Sbjct: 159 RVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFD-RHPDGVAS------ 211
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYD 361
V F E+ + LDGR+FGGR + A +D
Sbjct: 212 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWD 243
>gi|412993528|emb|CCO14039.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 253 IVNASENKSEKKVKSVNFNGP----PTRVLLLRNMVGPGEVDDE-----LEDEVGSECAK 303
I E K E + + F GP PT+ +LL+N+ P E DE +E++V E +K
Sbjct: 521 IKTKEEEKRELIMMTQGFFGPSSPIPTKCVLLKNLFDPAEETDEEWWLDIEEDVKGEVSK 580
Query: 304 YGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQTTKALIDLDGRFFGGRVVRATFYDEE 363
YG + + F +++F+ E KA L+ R+F GR + F E
Sbjct: 581 YGECVHAHVDKENPYGF-------CYLKFDDVEAAKKAQFGLNNRWFAGRSIICDFQFVE 633
Query: 364 RFSKN 368
++K+
Sbjct: 634 PYNKH 638
>gi|168030966|ref|XP_001767993.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680835|gb|EDQ67268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 275 TRVLLLRNMVGPGEVDDELE-----DEVGSECAKYGTVTRVLIFEITEPNFPVDEAVRIF 329
T+V+ L +V ++ D++E +++ EC KYG++ V+I + V +F
Sbjct: 397 TKVICLSQVVSIVDLKDDVEFDEIVEDMKEECGKYGSLLNVVIPRPSYDEEDVPGIGMVF 456
Query: 330 VQFERSEQTTKALIDLDGRFFGGRVVRATFYDEERF 365
V++ E KA L R FGG++V A++Y E++F
Sbjct: 457 VEYSDLEGAAKAKQALHNRKFGGKLVIASYYSEDKF 492
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,699,750,404
Number of Sequences: 23463169
Number of extensions: 317580169
Number of successful extensions: 2311169
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3124
Number of HSP's successfully gapped in prelim test: 10188
Number of HSP's that attempted gapping in prelim test: 2185271
Number of HSP's gapped (non-prelim): 98248
length of query: 381
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 237
effective length of database: 8,980,499,031
effective search space: 2128378270347
effective search space used: 2128378270347
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)