Query 016858
Match_columns 381
No_of_seqs 203 out of 1569
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 03:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016858.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016858hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 2.9E-71 6.3E-76 541.3 37.9 358 10-381 8-365 (365)
2 KOG0697 Protein phosphatase 1B 100.0 1.6E-50 3.4E-55 365.5 22.4 271 79-356 20-301 (379)
3 PTZ00224 protein phosphatase 2 100.0 2.6E-46 5.6E-51 366.8 31.8 255 77-351 18-276 (381)
4 KOG0698 Serine/threonine prote 100.0 5.3E-46 1.2E-50 361.1 29.3 265 78-354 36-312 (330)
5 PF00481 PP2C: Protein phospha 100.0 6.3E-46 1.4E-50 348.9 16.9 249 82-338 1-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 1.5E-42 3.2E-47 326.7 21.6 244 77-349 4-255 (262)
7 KOG0699 Serine/threonine prote 100.0 1E-42 2.2E-47 324.7 19.1 167 181-347 329-504 (542)
8 cd00143 PP2Cc Serine/threonine 100.0 1.8E-37 4E-42 289.2 28.9 246 82-345 2-254 (254)
9 PRK14559 putative protein seri 100.0 6.2E-38 1.3E-42 323.7 27.6 254 80-350 374-639 (645)
10 smart00332 PP2Cc Serine/threon 100.0 6.6E-37 1.4E-41 286.3 28.8 244 81-343 6-255 (255)
11 KOG0700 Protein phosphatase 2C 100.0 1.6E-35 3.4E-40 283.1 20.7 218 116-333 96-378 (390)
12 KOG1323 Serine/threonine phosp 100.0 2E-28 4.3E-33 227.1 23.3 232 116-350 141-491 (493)
13 KOG1379 Serine/threonine prote 99.9 2.8E-22 6.1E-27 186.3 20.6 205 93-344 89-329 (330)
14 KOG0618 Serine/threonine phosp 99.9 3.6E-22 7.7E-27 206.9 15.2 242 81-347 522-773 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 2.7E-20 5.8E-25 169.8 14.3 183 85-313 2-196 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 1.5E-16 3.3E-21 142.9 19.6 175 93-330 15-192 (193)
17 TIGR02865 spore_II_E stage II 99.6 2.4E-14 5.3E-19 153.0 20.9 189 91-345 563-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 3.3E-12 7.2E-17 114.4 19.4 178 117-346 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.4 3.3E-05 7.2E-10 76.5 19.6 173 117-346 173-366 (367)
20 PRK10693 response regulator of 66.8 50 0.0011 31.6 9.9 50 160-214 208-259 (303)
21 PHA02606 5.1 hypothetical prot 35.4 29 0.00062 30.0 2.2 28 3-30 122-149 (179)
22 COG3700 AphA Acid phosphatase 31.9 91 0.002 27.8 4.7 49 284-333 71-130 (237)
23 PF09436 DUF2016: Domain of un 26.0 39 0.00085 25.3 1.3 18 283-301 26-43 (72)
24 cd00534 DHNA_DHNTPE Dihydroneo 22.1 3.8E+02 0.0082 21.5 6.7 60 290-351 42-103 (118)
25 PF04155 Ground-like: Ground-l 20.8 3E+02 0.0065 20.4 5.3 41 300-342 7-47 (76)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.9e-71 Score=541.30 Aligned_cols=358 Identities=83% Similarity=1.280 Sum_probs=319.8
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCCCCccccCCcccccccccccceeccccccccccccCCCCCCCcCCcceeeeEEeee
Q 016858 10 LENGSSSRSGRPPNPPTAADRTGLTNDRVVVPRKKSLVRHASLQVKTTTALDVSVEPVLGVGNHETEFVPVVRSGACADI 89 (381)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~s~~~~~~~~~~~~~~~p~~~~~~~s~~ 89 (381)
++.|+|+.+||||+|+.+++| +.++.||+|+ +++.+ ..++.++...+++....|+|.++++++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 73 (365)
T PLN03145 8 GGEGGSSGGGRPPNPSVAACC------------KPSLVRHSSL-VKTPA-SDISVENELTFENMDTEFIPVVRSGAWADI 73 (365)
T ss_pred CCCCCCcCCCCCCCCcccccc------------cchhhcchhh-hhccc-cccccccccccccchhhccCceEEEEEccc
Confidence 344455558999999999999 8899999998 76533 445556556666777789999999999999
Q ss_pred cCCCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCChHHHHHHHHHHHHHHhHH
Q 016858 90 GLRPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQEIERVVASAFLQTDSA 169 (381)
Q Consensus 90 G~R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~~~~i~~~l~~af~~~~~~ 169 (381)
|.|+.|||++++..++..+.+..........||+|||||||+.+|++|++++++.+.+...+...++++|.++|..+++.
T Consensus 74 G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al~~af~~~d~~ 153 (365)
T PLN03145 74 GSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVVSSAFLQTDTA 153 (365)
T ss_pred cCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHhHH
Confidence 99999999999877765444444334455789999999999999999999999999887777777889999999999999
Q ss_pred HHHHhhhcccccccceeeEEEEeCCeEEEeecCcceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCCEEeccccCCeec
Q 016858 170 FAEACSLDAALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLN 249 (381)
Q Consensus 170 i~~~~~~~~~~~~GtT~~~ali~~~~l~vanvGDSRa~l~r~g~~~~lT~dH~~~~~~e~~Ri~~~gg~v~~~~~~g~l~ 249 (381)
|.+.+.......+|||++++++.++++|++|+||||+|++++|++++||+||++.++.|++||++.||++..++.+|.+.
T Consensus 154 ~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~~g~v~g~l~ 233 (365)
T PLN03145 154 FAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQLN 233 (365)
T ss_pred HHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCceecceECCccc
Confidence 98866555455699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 016858 250 VARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEA 329 (381)
Q Consensus 250 ~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~ei~~iv~~~~~~~~~~~~~a~~Lv~~a 329 (381)
+||+|||+.+|.++...+++++++|++...+|+++|.|||||||||||+++++++++++++.+++..+|+++|+.|+++|
T Consensus 234 vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~A 313 (365)
T PLN03145 234 VARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEA 313 (365)
T ss_pred cccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999998877666677889999999999999999999999999999999999999888888889999999999999
Q ss_pred HhCCCCCCeEEEEEEeCCCCCCCCCCCCcccccccCHHHHHHHHHhhhhcCC
Q 016858 330 LKRKSGDNLAVVVVCFQSQPPPNLIAPRSRVQRSFSAEGLRELQSFLDSLGN 381 (381)
Q Consensus 330 ~~~g~~DNiTvivV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (381)
+++++.||+|||||+|+..+||....+|.+++|+|++|||++||++|+++++
T Consensus 314 l~rgs~DNITvIVV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (365)
T PLN03145 314 LKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQRSISAEGLRELQSFLDSLAN 365 (365)
T ss_pred HhCCCCCCEEEEEEEeecCCCccccccccccccccCHHHHHHHHHhhhccCC
Confidence 9999999999999999999999999999999999999999999999999875
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-50 Score=365.52 Aligned_cols=271 Identities=36% Similarity=0.615 Sum_probs=244.3
Q ss_pred cceeeeEEeeecCCCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCChH-----
Q 016858 79 PVVRSGACADIGLRPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQ----- 153 (381)
Q Consensus 79 p~~~~~~~s~~G~R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~~~----- 153 (381)
..++||..|++|||-.|||++.+...+.. .-.+|+||+|||||.|+..|.+|++++.+.|.+..+|..
T Consensus 20 Nglryg~SSMQGWR~eMEDah~A~~~l~~-------~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~g 92 (379)
T KOG0697|consen 20 NGLRYGVSSMQGWRVEMEDAHTAVAGLPS-------PLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNG 92 (379)
T ss_pred CceeeeeccccchhhhhhhhhhhhhcCCC-------CccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCC
Confidence 46799999999999999999987765432 346899999999999999999999999999987655544
Q ss_pred ---HHHHHHHHHHHHHhHHHHHHhhhcc-cccccceeeEEEEeCCeEEEeecCcceEEEEeCCeeeecCCCCCCCChHHH
Q 016858 154 ---EIERVVASAFLQTDSAFAEACSLDA-ALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEK 229 (381)
Q Consensus 154 ---~i~~~l~~af~~~~~~i~~~~~~~~-~~~~GtT~~~ali~~~~l~vanvGDSRa~l~r~g~~~~lT~dH~~~~~~e~ 229 (381)
+.++-|+..|+++|+.......... ..++|||++++++...++|++|+||||++|+|+|+++.-|.||+|.+|.|+
T Consensus 93 sv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~Ek 172 (379)
T KOG0697|consen 93 SVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEK 172 (379)
T ss_pred cHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHHH
Confidence 7888899999999998877554332 234999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEeccccCCeeccccccCCCccccCCC--CCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHHHHHH
Q 016858 230 KRIEASGGYVYDGYLNGQLNVARALGDWHVEGMKG--ADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDF 307 (381)
Q Consensus 230 ~Ri~~~gg~v~~~~~~g~l~~tralGd~~~~~~~~--~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~ei~~i 307 (381)
+||+.+||.|--.+.||.|+++|||||++||.... +..+.++++|+++.......|+||||+||||||+++++|++++
T Consensus 173 eRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcef 252 (379)
T KOG0697|consen 173 ERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEF 252 (379)
T ss_pred HHHhcCCCeEEEEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHH
Confidence 99999999999999999999999999999998773 4567788999999999998899999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeCCCCCCCCCCC
Q 016858 308 ARRRLQEHNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPPPNLIAP 356 (381)
Q Consensus 308 v~~~~~~~~~~~~~a~~Lv~~a~~~g~~DNiTvivV~~~~~~~~~~~~~ 356 (381)
++.++.-..++..+|..+++.++.+|++||+|+|+|+|..-|.+++...
T Consensus 253 v~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv~~eav 301 (379)
T KOG0697|consen 253 VKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKVSIEAV 301 (379)
T ss_pred HHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCCCHHHH
Confidence 9999999999999999999999999999999999999998877655443
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=2.6e-46 Score=366.85 Aligned_cols=255 Identities=28% Similarity=0.495 Sum_probs=219.0
Q ss_pred CCcceeeeEEeeecCCCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCChHHHH
Q 016858 77 FVPVVRSGACADIGLRPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQEIE 156 (381)
Q Consensus 77 ~~p~~~~~~~s~~G~R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~~~~i~ 156 (381)
....+++++.+++|.|++|||++++... ....+|+|||||||..+|+++++.+.+.+.+..... ..
T Consensus 18 ~~~~~~~g~~s~~G~R~~nED~~~v~~~------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~--~~ 83 (381)
T PTZ00224 18 GNSIFRCASACVNGYRESMEDAHLLYLT------------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPM--TD 83 (381)
T ss_pred CCccEEEEEEeCCCCCCCCCCeeEeccC------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccc--cH
Confidence 4456789999999999999999876432 345699999999999999999999998886532211 23
Q ss_pred HHHHHHHHHHhHHHHHHhhhcccccccceeeEEEEe-CCeEEEeecCcceEEEEeCCeeeecCCCCCCCChHHHHHHHHc
Q 016858 157 RVVASAFLQTDSAFAEACSLDAALASGTTALAALVF-GRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEAS 235 (381)
Q Consensus 157 ~~l~~af~~~~~~i~~~~~~~~~~~~GtT~~~ali~-~~~l~vanvGDSRa~l~r~g~~~~lT~dH~~~~~~e~~Ri~~~ 235 (381)
+.|.++|..+|+.|.+.. ..+|||+++++|. +++++|+|+||||+|++|+|++++||+||++.++.|+.||.+.
T Consensus 84 ~~l~~a~~~~d~~i~~~~-----~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~ 158 (381)
T PTZ00224 84 ERMEELCLEIDEEWMDSG-----REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEAC 158 (381)
T ss_pred HHHHHHHHHHHHHHHhcc-----cCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHc
Confidence 458889999999998642 2369999998887 5799999999999999999999999999999999999999999
Q ss_pred CCEEeccccCCeeccccccCCCccccCCC--CCCCCccccceEEEEEcCCCCeEEEEecCCCCC-CCChHHHHHHHHHHH
Q 016858 236 GGYVYDGYLNGQLNVARALGDWHVEGMKG--ADGGPLSAEPELMSTKLTEEDEFLIIACDGVWD-VFMSQNAVDFARRRL 312 (381)
Q Consensus 236 gg~v~~~~~~g~l~~tralGd~~~~~~~~--~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd-~l~~~ei~~iv~~~~ 312 (381)
||.+...+.+|.+.+||+||+..+|.... ...+.++++|++..+.+.++| ||||||||||| +++++++.+++.+.+
T Consensus 159 gg~v~~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l 237 (381)
T PTZ00224 159 GGRVVSNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGNFSNEEVVAFVKEQL 237 (381)
T ss_pred cCEeccccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCccCHHHHHHHHHHHH
Confidence 99999999999999999999988775432 223446789999999998887 88899999999 799999999998777
Q ss_pred hcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeCCCCCC
Q 016858 313 QEHNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPPP 351 (381)
Q Consensus 313 ~~~~~~~~~a~~Lv~~a~~~g~~DNiTvivV~~~~~~~~ 351 (381)
....+++.+|+.|++.|+.+|+.||+|||||+|...+..
T Consensus 238 ~~~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~~~ 276 (381)
T PTZ00224 238 ETCDDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGASY 276 (381)
T ss_pred hcCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCCCh
Confidence 667789999999999999999999999999999987644
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-46 Score=361.13 Aligned_cols=265 Identities=43% Similarity=0.665 Sum_probs=228.3
Q ss_pred CcceeeeEE-eeecCCCCCCcceeeeecccccccCcCCCCC-CceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCChH--
Q 016858 78 VPVVRSGAC-ADIGLRPTMEDVFLCVDNFMSDYGLKNLIDE-PSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQ-- 153 (381)
Q Consensus 78 ~p~~~~~~~-s~~G~R~~neD~~~~~~~~~~~~~~~~~~~~-~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~~~-- 153 (381)
.+.++.+.. +.+|.|..|||++.+...+... ..... ...||||||||||..+|+|+.++++..+.++..+..
T Consensus 36 ~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~----~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~ 111 (330)
T KOG0698|consen 36 NESYRLGSLLSIRGRRRKMEDRHVQLPDFLEE----DVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDR 111 (330)
T ss_pred cccccceEEEecCCCCCccCcceeeccccccc----ccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccch
Confidence 334454444 7777799999999988765421 11222 689999999999999999999999999998766655
Q ss_pred -HHHHHHHHHHH-HHhHHHHHHhhhcccccccceeeEEEEeCC-eEEEeecCcceEEEEeCC-eeeecCCCCCCCChHHH
Q 016858 154 -EIERVVASAFL-QTDSAFAEACSLDAALASGTTALAALVFGR-RLVVANVGDCRAVLCRRG-KAIEMSRDHKPVCSKEK 229 (381)
Q Consensus 154 -~i~~~l~~af~-~~~~~i~~~~~~~~~~~~GtT~~~ali~~~-~l~vanvGDSRa~l~r~g-~~~~lT~dH~~~~~~e~ 229 (381)
..++++.++|. .++..+... .......|||++++++.++ ++||||+|||||+|++.| .+++||.||+|..+.|+
T Consensus 112 ~~~~~a~~~~F~~~~D~~~~~~--~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~ 189 (330)
T KOG0698|consen 112 QDVKDALRRAFLTKTDSEFLEK--REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDER 189 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh--ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHH
Confidence 48899999999 699999876 1113458999988888865 999999999999999766 89999999999999999
Q ss_pred HHHHHcCCEEecc----ccCCeeccccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHHHH
Q 016858 230 KRIEASGGYVYDG----YLNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAV 305 (381)
Q Consensus 230 ~Ri~~~gg~v~~~----~~~g~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~ei~ 305 (381)
.||+++||+|... |.+|.|+++|+|||..+|. +.++++|++....++..|+||||+||||||++++||++
T Consensus 190 ~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~------~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav 263 (330)
T KOG0698|consen 190 ERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKS------QGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAV 263 (330)
T ss_pred HHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcC------CcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHH
Confidence 9999999999853 9999999999999999985 34899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeCCCCCCCCC
Q 016858 306 DFARRRLQEHNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPPPNLI 354 (381)
Q Consensus 306 ~iv~~~~~~~~~~~~~a~~Lv~~a~~~g~~DNiTvivV~~~~~~~~~~~ 354 (381)
++|+..+.....+..+++.|...+..+++.||+|||||.|...+.....
T Consensus 264 ~~V~~~~~~~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~~~~~ 312 (330)
T KOG0698|consen 264 DLVRDELASISSPLAAAKLLATEALSRGSKDNITVVVVRLKSSPKSPSS 312 (330)
T ss_pred HHHHHHhhccccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCccccccC
Confidence 9999887677889999999999999999999999999999987654433
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=6.3e-46 Score=348.88 Aligned_cols=249 Identities=42% Similarity=0.712 Sum_probs=207.5
Q ss_pred eeeEEeeecCCCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCChH--HHHHHH
Q 016858 82 RSGACADIGLRPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQ--EIERVV 159 (381)
Q Consensus 82 ~~~~~s~~G~R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~~~--~i~~~l 159 (381)
.+++.+..|.|.+|||.+++..++... .......+|+|||||||..+++++++.+++.+.+...+.. .+.++|
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~-----~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al 75 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSN-----SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEAL 75 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCC-----TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCcccc-----CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcc
Confidence 367888999999999999998865321 1236778999999999999999999999988876433222 688899
Q ss_pred HHHHHH-HhHHHHHHhhhcccccccceeeEEEEeCCeEEEeecCcceEEEEeCCeee-ecCCCCCCCChHHHHHHHHcCC
Q 016858 160 ASAFLQ-TDSAFAEACSLDAALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAI-EMSRDHKPVCSKEKKRIEASGG 237 (381)
Q Consensus 160 ~~af~~-~~~~i~~~~~~~~~~~~GtT~~~ali~~~~l~vanvGDSRa~l~r~g~~~-~lT~dH~~~~~~e~~Ri~~~gg 237 (381)
..+|.. ++..+...........+|||++++++.++++|+||+||||+||++++... +||+||+|.++.|+.||+++||
T Consensus 76 ~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg 155 (254)
T PF00481_consen 76 RQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGG 155 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-
T ss_pred cceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccc
Confidence 999999 88888773221134569999999999999999999999999999999888 9999999999999999999999
Q ss_pred EEe-ccccCCeeccccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHHHHHHHHHHHhcCC
Q 016858 238 YVY-DGYLNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHN 316 (381)
Q Consensus 238 ~v~-~~~~~g~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~ei~~iv~~~~~~~~ 316 (381)
.+. ..+.+|.|.+||+|||..+|... ...++++|++..++++++|.|||||||||||++++++++++++.......
T Consensus 156 ~v~~~~rv~g~l~~sRalGd~~~k~~~---~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~ 232 (254)
T PF00481_consen 156 RVSENGRVNGVLAVSRALGDFDLKPPG---KPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGR 232 (254)
T ss_dssp GEEETEEETTTBSSSB-EE-GGGTTCT---SSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHS
T ss_pred ccccchhhhhccccccccccccccccc---cceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCC
Confidence 999 88999999999999999998722 33589999999999999999999999999999999999999999887767
Q ss_pred CHHHHHHHHHHHHHhCCCCCCe
Q 016858 317 DPVMCSKDLVDEALKRKSGDNL 338 (381)
Q Consensus 317 ~~~~~a~~Lv~~a~~~g~~DNi 338 (381)
.|+.+|+.|+++|+++|+.|||
T Consensus 233 ~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 233 SPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHHHHHHHTTHHSHE
T ss_pred cHHHHHHHHHHHHHhcCCCCCC
Confidence 8999999999999999999997
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=326.74 Aligned_cols=244 Identities=30% Similarity=0.434 Sum_probs=207.0
Q ss_pred CCcceeeeEEeeecC-CCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCC----
Q 016858 77 FVPVVRSGACADIGL-RPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEF---- 151 (381)
Q Consensus 77 ~~p~~~~~~~s~~G~-R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~---- 151 (381)
..+.+.+++.++.|. |..|||++.+..+.. ... ..||+|||||||+.++++|++.+++.|.+....
T Consensus 4 ~~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~--------~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~ 74 (262)
T COG0631 4 GILSLKVAGLSDVGTVRKHNEDAFLIKPNEN--------GNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFN 74 (262)
T ss_pred ccceeeeeeeccCCCccCCCCcceeeccccC--------Ccc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhcccc
Confidence 345678899999998 889999998875311 122 579999999999999999999999988763111
Q ss_pred -hHH-HHHHHHHHHHHHhHHHHHHhhh-cccccccceeeEEEEeCCeEEEeecCcceEEEEeCCeeeecCCCCCCCChHH
Q 016858 152 -PQE-IERVVASAFLQTDSAFAEACSL-DAALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKE 228 (381)
Q Consensus 152 -~~~-i~~~l~~af~~~~~~i~~~~~~-~~~~~~GtT~~~ali~~~~l~vanvGDSRa~l~r~g~~~~lT~dH~~~~~~e 228 (381)
... +.+.+.+++..++..+...... .....+|||++++++.++++++|||||||+||+|+|+++++|.||++.+..+
T Consensus 75 ~~~~~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~ 154 (262)
T COG0631 75 SLNESLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLE 154 (262)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHH
Confidence 111 6789999999999999887542 2345699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEeccccCCeeccccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHHHHHHH
Q 016858 229 KKRIEASGGYVYDGYLNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFA 308 (381)
Q Consensus 229 ~~Ri~~~gg~v~~~~~~g~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~ei~~iv 308 (381)
+.|+...++.....+.+ .+||+||+.. ...|++....+.++| |||||||||||.++++++.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~---~ltralG~~~------------~~~p~~~~~~~~~~d-~llL~SDGl~d~v~~~~i~~il 218 (262)
T COG0631 155 QRGIITPEEARSHPRRN---ALTRALGDFD------------LLEPDITELELEPGD-FLLLCSDGLWDVVSDDEIVDIL 218 (262)
T ss_pred HhcCCCHHHHHhCccch---hhhhhcCCCc------------ccceeEEEEEcCCCC-EEEEECCCCccCcCHHHHHHHH
Confidence 98876666555555544 7899999874 378999999999985 8889999999999999999997
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeCCCC
Q 016858 309 RRRLQEHNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQP 349 (381)
Q Consensus 309 ~~~~~~~~~~~~~a~~Lv~~a~~~g~~DNiTvivV~~~~~~ 349 (381)
+. ..+++.++++|++.|+.+++.||+|+|+|.+...+
T Consensus 219 ~~----~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 219 KN----SETPQEAADKLIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred hc----CCCHHHHHHHHHHHHHhcCCCCceEEEEEEeeccc
Confidence 64 67899999999999999999999999999998775
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=324.69 Aligned_cols=167 Identities=43% Similarity=0.692 Sum_probs=156.8
Q ss_pred cccceeeEEEEeCCeEEEeecCcceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCCEEe-ccccCCeeccccccCCCcc
Q 016858 181 ASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVY-DGYLNGQLNVARALGDWHV 259 (381)
Q Consensus 181 ~~GtT~~~ali~~~~l~vanvGDSRa~l~r~g~~~~lT~dH~~~~~~e~~Ri~~~gg~v~-~~~~~g~l~~tralGd~~~ 259 (381)
.+|||++||++.+++|+|||+||||+++.|+|+++.||.||+|....|..||.++||.|. ++|++|.|+++|+|||..|
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLSRA~GDHaY 408 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLSRAFGDHAY 408 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchhhhhhhhhh
Confidence 589999999999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred ccCCC--CCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-----
Q 016858 260 EGMKG--ADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKR----- 332 (381)
Q Consensus 260 ~~~~~--~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~ei~~iv~~~~~~~~~~~~~a~~Lv~~a~~~----- 332 (381)
|.... ...+.+++.|+|+...|+++|+|+||+|||||++++.|+++++|+..+..+.....+|++|++.+++-
T Consensus 409 K~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~GD 488 (542)
T KOG0699|consen 409 KKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDGD 488 (542)
T ss_pred hcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCCC
Confidence 87653 23567889999999999999999999999999999999999999999999999999999999999863
Q ss_pred -CCCCCeEEEEEEeCC
Q 016858 333 -KSGDNLAVVVVCFQS 347 (381)
Q Consensus 333 -g~~DNiTvivV~~~~ 347 (381)
.+.||+|||+++|+.
T Consensus 489 GTGCDNMT~ii~~Fkr 504 (542)
T KOG0699|consen 489 GTGCDNMTVIITTFKR 504 (542)
T ss_pred CcCCCcceEEEEEecc
Confidence 368999999999984
No 8
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.8e-37 Score=289.17 Aligned_cols=246 Identities=44% Similarity=0.703 Sum_probs=208.7
Q ss_pred eeeEEeeecCCCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCC-----hHHHH
Q 016858 82 RSGACADIGLRPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEF-----PQEIE 156 (381)
Q Consensus 82 ~~~~~s~~G~R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~-----~~~i~ 156 (381)
.++..+..|.|+.|||++++..... ..+..+|+|||||||+..+++|++.+++.+.+.... ...+.
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~---------~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~ 72 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLN---------NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIE 72 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCC---------CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHH
Confidence 3566677778999999998865410 026789999999999999999999999988764322 45677
Q ss_pred HHHHHHHHHHhHHHHHHhhh-cccccccceeeEEEEeCCeEEEeecCcceEEEEeCCeeeecCCCCCCCChHHHHHHHHc
Q 016858 157 RVVASAFLQTDSAFAEACSL-DAALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEAS 235 (381)
Q Consensus 157 ~~l~~af~~~~~~i~~~~~~-~~~~~~GtT~~~ali~~~~l~vanvGDSRa~l~r~g~~~~lT~dH~~~~~~e~~Ri~~~ 235 (381)
..|..+|..++..+...... .....+|||++++++.+++++++|+||||+|++++++++++|.||++.++.+..|+...
T Consensus 73 ~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~ 152 (254)
T cd00143 73 EALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKA 152 (254)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHc
Confidence 88999999999999876543 22345899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEeccccCCeeccccccCCCccccCCCCCCCCccccceEEEEEc-CCCCeEEEEecCCCCCCCChHHHHHHHHHHHhc
Q 016858 236 GGYVYDGYLNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKL-TEEDEFLIIACDGVWDVFMSQNAVDFARRRLQE 314 (381)
Q Consensus 236 gg~v~~~~~~g~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l-~~~d~fLvL~SDGlwd~l~~~ei~~iv~~~~~~ 314 (381)
+|++......+...+||++|+..++. ....+|++....+ .++| +|||||||||+++++++|.+++......
T Consensus 153 ~~~~~~~~~~~~~~~t~~lG~~~~~~-------~~~~~~~~~~~~l~~~~d-~ill~SDG~~~~l~~~~i~~~~~~~~~~ 224 (254)
T cd00143 153 GGRVSNGRVPGVLAVTRALGDFDLKP-------GVSAEPDVTVVKLTEDDD-FLILASDGLWDVLSNQEAVDIVRSELAK 224 (254)
T ss_pred CCcEEeCEEcCceeeccccCCccccC-------CEEcCCeEEEEEeCCCCc-EEEEECCCCeeccChHHHHHHHHHHhcc
Confidence 99887777788899999999987663 2567899999999 6776 6779999999999999999998763211
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEEEEEEe
Q 016858 315 HNDPVMCSKDLVDEALKRKSGDNLAVVVVCF 345 (381)
Q Consensus 315 ~~~~~~~a~~Lv~~a~~~g~~DNiTvivV~~ 345 (381)
.+++++|+.|++.|..+++.||+|+||+.|
T Consensus 225 -~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 225 -EDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred -cCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 379999999999999999999999999975
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=6.2e-38 Score=323.71 Aligned_cols=254 Identities=20% Similarity=0.254 Sum_probs=185.2
Q ss_pred ceeeeEEeeecC-CCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhh----cCCChHH
Q 016858 80 VVRSGACADIGL-RPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITE----DEEFPQE 154 (381)
Q Consensus 80 ~~~~~~~s~~G~-R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~----~~~~~~~ 154 (381)
.++++++|++|. |++|||++.+..++...............+|+|||||||+.+++.||+.+++.|.+ .......
T Consensus 374 ~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~ 453 (645)
T PRK14559 374 SLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELP 453 (645)
T ss_pred eEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccccc
Confidence 478899999997 99999998765432111110000112356899999999999888888777766543 1111112
Q ss_pred HHHHHHHHHHHHhHHHHHHhhhc---ccccccceeeEEEEeCCeEEEeecCcceEEEE-eCCeeeecCCCCCCCChHHHH
Q 016858 155 IERVVASAFLQTDSAFAEACSLD---AALASGTTALAALVFGRRLVVANVGDCRAVLC-RRGKAIEMSRDHKPVCSKEKK 230 (381)
Q Consensus 155 i~~~l~~af~~~~~~i~~~~~~~---~~~~~GtT~~~ali~~~~l~vanvGDSRa~l~-r~g~~~~lT~dH~~~~~~e~~ 230 (381)
.++.|.++|..+|..|.+..... ....+|||++++++.++++|++||||||+|++ |+|++++||+||++.+...
T Consensus 454 ~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv-- 531 (645)
T PRK14559 454 DEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREI-- 531 (645)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHH--
Confidence 35678999999999998754322 23359999999999999999999999999998 5789999999999764432
Q ss_pred HHHHcCCE--EeccccCCeeccccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCC-CChHHHHHH
Q 016858 231 RIEASGGY--VYDGYLNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDV-FMSQNAVDF 307 (381)
Q Consensus 231 Ri~~~gg~--v~~~~~~g~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~-l~~~ei~~i 307 (381)
+.|-. ....+ .+...+||++|+...+ ..+|++..+.+.++| +||||||||||+ +.+..+.+.
T Consensus 532 ---~~Gi~~~~a~~~-p~~~~LTrALG~~~~~----------~l~Pdi~~~~L~~gD-~lLLCSDGL~D~~~ve~~~~~~ 596 (645)
T PRK14559 532 ---QRGVEPQIAYAR-PDAYQLTQALGPRDNS----------AIQPDIQFLEIEEDT-LLLLCSDGLSDNDLLETHWQTH 596 (645)
T ss_pred ---HhCCCHHHHhcC-cccceeeeccCCCCCC----------cccceEEEEEcCCCC-EEEEECCCCCCCcccchHHHHH
Confidence 22300 00111 2456789999986432 347999999998877 677999999995 344444444
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeCCCCC
Q 016858 308 ARRRLQEHNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPP 350 (381)
Q Consensus 308 v~~~~~~~~~~~~~a~~Lv~~a~~~g~~DNiTvivV~~~~~~~ 350 (381)
+...+....+++++|+.|++.|+.+|++||+|+|||+++..|.
T Consensus 597 l~~il~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~ 639 (645)
T PRK14559 597 LLPLLSSSANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQ 639 (645)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCC
Confidence 4444666778999999999999999999999999999987654
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=6.6e-37 Score=286.26 Aligned_cols=244 Identities=44% Similarity=0.757 Sum_probs=208.0
Q ss_pred eeeeEEeeecCCCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCCh----HHHH
Q 016858 81 VRSGACADIGLRPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFP----QEIE 156 (381)
Q Consensus 81 ~~~~~~s~~G~R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~~----~~i~ 156 (381)
+.++..+..|.|..|||++++...+ ..+..+|+|||||||..+++++++.+.+.+.+..... ..+.
T Consensus 6 ~~~~~~~~~~~r~~neD~~~~~~~~----------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (255)
T smart00332 6 LRYGLSSMQGVRKPMEDAHVITPDL----------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVE 75 (255)
T ss_pred eeEEEecCCCCCCCCcceEEEeccC----------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHH
Confidence 4556666667799999998876431 1567899999999999999999999999887643222 3578
Q ss_pred HHHHHHHHHHhHHHHHHhhhcc-cccccceeeEEEEeCCeEEEeecCcceEEEEeCCeeeecCCCCCCCChHHHHHHHHc
Q 016858 157 RVVASAFLQTDSAFAEACSLDA-ALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEAS 235 (381)
Q Consensus 157 ~~l~~af~~~~~~i~~~~~~~~-~~~~GtT~~~ali~~~~l~vanvGDSRa~l~r~g~~~~lT~dH~~~~~~e~~Ri~~~ 235 (381)
+.|.+++..++..+........ ...+|||++++++..++++++|+||||+|++|++++.++|.||++.+..|+.||...
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~ 155 (255)
T smart00332 76 EALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAA 155 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHc
Confidence 8899999999999987644332 345899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEeccccCCeeccccccCCCccccCCCCCCCCccccceEEEEEc-CCCCeEEEEecCCCCCCCChHHHHHHHHHHHhc
Q 016858 236 GGYVYDGYLNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKL-TEEDEFLIIACDGVWDVFMSQNAVDFARRRLQE 314 (381)
Q Consensus 236 gg~v~~~~~~g~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l-~~~d~fLvL~SDGlwd~l~~~ei~~iv~~~~~~ 314 (381)
++.+...+..+...+||++|+..++. .+..+|++...++ .++| +|||||||||++++++++.+++......
T Consensus 156 ~~~~~~~~~~~~~~lt~~~g~~~~~~-------~i~~~p~~~~~~~~~~~d-~ill~SDGv~~~l~~~~i~~~~~~~~~~ 227 (255)
T smart00332 156 GGFVINGRVNGVLALSRAIGDFFLKP-------YVSAEPDVTVVELTEKDD-FLILASDGLWDVLSNQEVVDIVRKHLSK 227 (255)
T ss_pred CCEEECCeECCeEecccccCCHhhcC-------CeEeeeEEEEEEecCCCc-EEEEECCccccCCCHHHHHHHHHHHhhc
Confidence 99999888888999999999987663 3678899999996 6666 7779999999999999999998764322
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEEEEE
Q 016858 315 HNDPVMCSKDLVDEALKRKSGDNLAVVVV 343 (381)
Q Consensus 315 ~~~~~~~a~~Lv~~a~~~g~~DNiTvivV 343 (381)
.++..+|+.|++.|..++..||+|+|||
T Consensus 228 -~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 228 -SDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred -CCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 3699999999999999999999999985
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=283.06 Aligned_cols=218 Identities=32% Similarity=0.471 Sum_probs=183.6
Q ss_pred CCCceEEEEEcCCCChhHHHHHHHHhHHHHhh-------------cCC---------------------ChHHHHHHHHH
Q 016858 116 DEPSAFYGMFDGHGGKHAADFASCHLPRFITE-------------DEE---------------------FPQEIERVVAS 161 (381)
Q Consensus 116 ~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~-------------~~~---------------------~~~~i~~~l~~ 161 (381)
.+++.|+||||||||..+++|.++++..++.. ..+ ....+.++|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 58889999999999999999999999988871 011 14568889999
Q ss_pred HHHHHhHHHHHHhhh-----cccccccceeeEEEEeCCeEEEeecCcceEEEEe---CC---eeeecCCCCCCCChHHHH
Q 016858 162 AFLQTDSAFAEACSL-----DAALASGTTALAALVFGRRLVVANVGDCRAVLCR---RG---KAIEMSRDHKPVCSKEKK 230 (381)
Q Consensus 162 af~~~~~~i~~~~~~-----~~~~~~GtT~~~ali~~~~l~vanvGDSRa~l~r---~g---~~~~lT~dH~~~~~~e~~ 230 (381)
||.++++.|...... .....+|+||+++++.+..|||||+|||||+|.+ .+ .++|||.||+..++.|++
T Consensus 176 Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~ 255 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVR 255 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHH
Confidence 999999999765422 1223599999999999999999999999999974 33 479999999999999999
Q ss_pred HHHHcCC----EEec--cccCCeeccccccCCCccccCCC--------------CCCCCccccceEEEEEcCCCCeEEEE
Q 016858 231 RIEASGG----YVYD--GYLNGQLNVARALGDWHVEGMKG--------------ADGGPLSAEPELMSTKLTEEDEFLII 290 (381)
Q Consensus 231 Ri~~~gg----~v~~--~~~~g~l~~tralGd~~~~~~~~--------------~~g~~~~~~pdi~~~~l~~~d~fLvL 290 (381)
||++.+. .+-. .|+.|.|.++|||||..+|.-+- ...++++++|+++.++|++.|.||||
T Consensus 256 Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIl 335 (390)
T KOG0700|consen 256 RIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLIL 335 (390)
T ss_pred HHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEE
Confidence 9999985 3334 49999999999999999986541 12567889999999999999999999
Q ss_pred ecCCCCCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCC
Q 016858 291 ACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRK 333 (381)
Q Consensus 291 ~SDGlwd~l~~~ei~~iv~~~~~~~~~~~~~a~~Lv~~a~~~g 333 (381)
+||||||+|+++|++++|...+.....-+.+|+.|+++|+.+.
T Consensus 336 ASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 336 ASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred eccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 9999999999999999999876543445678999999987654
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=2e-28 Score=227.06 Aligned_cols=232 Identities=31% Similarity=0.473 Sum_probs=184.5
Q ss_pred CCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCC--------------------------------------C--hHHH
Q 016858 116 DEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEE--------------------------------------F--PQEI 155 (381)
Q Consensus 116 ~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~--------------------------------------~--~~~i 155 (381)
.-++.+|.+||||.|..+|-.|++.+.+.+.++.. . ..-+
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 45678999999999999999999888777654100 0 0124
Q ss_pred HHHHHHHHHHHhHHHHHHhhhcccccccceeeEEEEeCCeEEEeecCcceEEEEeCCeeeecCCCCCCCChHHHHHHHHc
Q 016858 156 ERVVASAFLQTDSAFAEACSLDAALASGTTALAALVFGRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEAS 235 (381)
Q Consensus 156 ~~~l~~af~~~~~~i~~~~~~~~~~~~GtT~~~ali~~~~l~vanvGDSRa~l~r~g~~~~lT~dH~~~~~~e~~Ri~~~ 235 (381)
..+|+.||+.+|++|...-+.. ....|+|++++++.-+++|++|+|||||+|+|+++++.||++.+| +.|++|||..
T Consensus 221 iGAlEsAFqemDeqiarer~~~-~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTP--etERqRlQ~L 297 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVW-RLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTP--ETERQRLQEL 297 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-cCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCc--HHHHHHHHHH
Confidence 5689999999999997754433 345899999999999999999999999999999999999999998 5689999986
Q ss_pred C--------CEE-----------------------------e------------------ccccCCeeccccccCCCccc
Q 016858 236 G--------GYV-----------------------------Y------------------DGYLNGQLNVARALGDWHVE 260 (381)
Q Consensus 236 g--------g~v-----------------------------~------------------~~~~~g~l~~tralGd~~~~ 260 (381)
+ +.+ . ..++.+.+.++|.|||.+++
T Consensus 298 af~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lk 377 (493)
T KOG1323|consen 298 AFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLK 377 (493)
T ss_pred hhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceee
Confidence 5 111 1 11333457899999999999
Q ss_pred cCCCC--CCCCccccceEEEEEcCC----CCeEEEEecCCCCCCCChHHHHHHHHHHHhcCC--CH---HHHHHHHHHHH
Q 016858 261 GMKGA--DGGPLSAEPELMSTKLTE----EDEFLIIACDGVWDVFMSQNAVDFARRRLQEHN--DP---VMCSKDLVDEA 329 (381)
Q Consensus 261 ~~~~~--~g~~~~~~pdi~~~~l~~----~d~fLvL~SDGlwd~l~~~ei~~iv~~~~~~~~--~~---~~~a~~Lv~~a 329 (381)
.+... +.+++++.|++...+|.+ .|+++||+|||+||+++++++..+|+..+.... +| ..+|+.|+..|
T Consensus 378 v~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~a 457 (493)
T KOG1323|consen 378 VVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAA 457 (493)
T ss_pred eecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHh
Confidence 88754 578899999999988873 455899999999999999999999999775433 33 47788898887
Q ss_pred Hh-------------CCCCCCeEEEEEEeCCCCC
Q 016858 330 LK-------------RKSGDNLAVVVVCFQSQPP 350 (381)
Q Consensus 330 ~~-------------~g~~DNiTvivV~~~~~~~ 350 (381)
.. .++.|||||.||-+..-..
T Consensus 458 rg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~~ 491 (493)
T KOG1323|consen 458 RGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCAA 491 (493)
T ss_pred cCccCCCceeccCCCcCCCCceEEEEEeccCCCC
Confidence 52 2678999999998875443
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.90 E-value=2.8e-22 Score=186.31 Aligned_cols=205 Identities=19% Similarity=0.293 Sum_probs=144.3
Q ss_pred CCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChh-----HHHHHHHHhH---HHHhhcCCChHHHHHHHHHHHH
Q 016858 93 PTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKH-----AADFASCHLP---RFITEDEEFPQEIERVVASAFL 164 (381)
Q Consensus 93 ~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~-----~a~~as~~l~---~~l~~~~~~~~~i~~~l~~af~ 164 (381)
+.-||+|++..+ ....+.|||||+|||. .+.|..+.+. +.+.+....+.+....|.+++.
T Consensus 89 ~~GEDa~Fvss~------------~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~ 156 (330)
T KOG1379|consen 89 KGGEDAWFVSSN------------PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYA 156 (330)
T ss_pred CCCCcceeeccC------------cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHH
Confidence 346999999865 6677999999999885 3444443332 2222233334456666666655
Q ss_pred HHhHHHHHHhhhcccccccceeeEEEEe--CCeEEEeecCcceEEEEeCCeeeecCC--CCCCCChHHHHHHHHcCCEEe
Q 016858 165 QTDSAFAEACSLDAALASGTTALAALVF--GRRLVVANVGDCRAVLCRRGKAIEMSR--DHKPVCSKEKKRIEASGGYVY 240 (381)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~GtT~~~ali~--~~~l~vanvGDSRa~l~r~g~~~~lT~--dH~~~~~~e~~Ri~~~gg~v~ 240 (381)
.+-.+ +...-++||++++++. +++|++||+|||...++|+|+++.-|. .|.++.|- ..
T Consensus 157 ~l~~~-------~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~Py-----------QL 218 (330)
T KOG1379|consen 157 ELKSQ-------KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPY-----------QL 218 (330)
T ss_pred HHhhc-------CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCce-----------ee
Confidence 44221 1122378888888888 889999999999999999999999884 56666551 11
Q ss_pred ccccCCeeccccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHHHHHHHHHHHh-cCCCHH
Q 016858 241 DGYLNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQ-EHNDPV 319 (381)
Q Consensus 241 ~~~~~g~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~ei~~iv~~~~~-~~~~~~ 319 (381)
.....|. ..+++| ..-..+.+.+.+.++| +|||+||||||++.+++|.+++..... ...+++
T Consensus 219 s~~p~~~---~~~~~d-------------~p~~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq 281 (330)
T KOG1379|consen 219 SSPPEGY---SSYISD-------------VPDSADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDARGNLDLQ 281 (330)
T ss_pred ccCCccc---cccccC-------------CccccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhccccccHH
Confidence 1111111 111222 2335678899999999 677999999999999999999987665 567899
Q ss_pred HHHHHHHHHHHhC-----------------------CCCCCeEEEEEE
Q 016858 320 MCSKDLVDEALKR-----------------------KSGDNLAVVVVC 344 (381)
Q Consensus 320 ~~a~~Lv~~a~~~-----------------------g~~DNiTvivV~ 344 (381)
..|+.|+..|... |..|+||+||..
T Consensus 282 ~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~ 329 (330)
T KOG1379|consen 282 VTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSS 329 (330)
T ss_pred HHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEec
Confidence 9999999988642 458999999875
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.88 E-value=3.6e-22 Score=206.87 Aligned_cols=242 Identities=29% Similarity=0.464 Sum_probs=205.7
Q ss_pred eeeeEEeeecCCCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCChHHHHHHHH
Q 016858 81 VRSGACADIGLRPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQEIERVVA 160 (381)
Q Consensus 81 ~~~~~~s~~G~R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~~~~i~~~l~ 160 (381)
|++|.+...|.|.++--+.+.+.+|. ++....|+.+||-+......+....+..++.++.....+-.+.|+
T Consensus 522 ~t~Gv~~~~gqrnk~c~~~~~v~nf~---------~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr 592 (1081)
T KOG0618|consen 522 WTYGVAGVSGQRNKVCSRAVWVENFF---------LNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMR 592 (1081)
T ss_pred eeeccchhcccccchhhhhhhhhhcc---------cCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHH
Confidence 35788888898877755555444443 477889999999999999999999999999876555544455699
Q ss_pred HHHHHHhHHHHHHhhhcccccccceeeEEEEeC--------CeEEEeecCcceEEEEeCCeeeecCCCC-CCCChHHHHH
Q 016858 161 SAFLQTDSAFAEACSLDAALASGTTALAALVFG--------RRLVVANVGDCRAVLCRRGKAIEMSRDH-KPVCSKEKKR 231 (381)
Q Consensus 161 ~af~~~~~~i~~~~~~~~~~~~GtT~~~ali~~--------~~l~vanvGDSRa~l~r~g~~~~lT~dH-~~~~~~e~~R 231 (381)
.+|...+.++....+ ..|..++.+.|.. .++++||+|+|.++++++|+..++|+-. ...+++|.+|
T Consensus 593 ~~fl~~~rklg~~g~-----~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~R 667 (1081)
T KOG0618|consen 593 NTFLRLNRKLGEEGQ-----VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKR 667 (1081)
T ss_pred HHHHHHhhhhhhhhc-----cccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHH
Confidence 999999999965532 3455566666653 3899999999999999999999988655 5558999999
Q ss_pred HHHcCCEEe-ccccCCeeccccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHHHHHHHHH
Q 016858 232 IEASGGYVY-DGYLNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARR 310 (381)
Q Consensus 232 i~~~gg~v~-~~~~~g~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~ei~~iv~~ 310 (381)
|+..+|++. +++.+|....||++|.....+ .+.+.|+|....|++.|+|||+++-++|++++-+++++.+|
T Consensus 668 I~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P-------~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vR- 739 (1081)
T KOG0618|consen 668 IVDSKGFITEDNKLNGVTSSTRAIGPFSLFP-------HVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVR- 739 (1081)
T ss_pred HHHhcCeecCCCeeeceeeeeeecccccccc-------cccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHh-
Confidence 999999999 899999999999999987765 47899999999999999999999999999999999999987
Q ss_pred HHhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeCC
Q 016858 311 RLQEHNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQS 347 (381)
Q Consensus 311 ~~~~~~~~~~~a~~Lv~~a~~~g~~DNiTvivV~~~~ 347 (381)
+..+|-.+|++|++.|..+|..||++|+||++..
T Consensus 740 ---n~~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~ 773 (1081)
T KOG0618|consen 740 ---NVEDPLLAAKKLCDLAQSYGCAENVSVLVVRLNH 773 (1081)
T ss_pred ---cCCchHHHHHHHHHHHHhcccccCeeEEEEEeec
Confidence 4678999999999999999999999999999874
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.84 E-value=2.7e-20 Score=169.79 Aligned_cols=183 Identities=22% Similarity=0.239 Sum_probs=100.4
Q ss_pred EEeeecCCCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHh----hcCCChHH--HHHH
Q 016858 85 ACADIGLRPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFIT----EDEEFPQE--IERV 158 (381)
Q Consensus 85 ~~s~~G~R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~----~~~~~~~~--i~~~ 158 (381)
+.+++|.++.|||++.+... .+..+++||||+||...++.+++.+++.+. +....... .++.
T Consensus 2 G~sh~~~~~~nqD~~~~~~~------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~ 69 (212)
T PF13672_consen 2 GRSHRGRGAPNQDAFGIRTD------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEAL 69 (212)
T ss_dssp -----TTSSS--EEEEEE-T------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred CccccCCCCCCCCCEEeeeC------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 35788999999999985543 556677999999988877776666665554 33333322 2233
Q ss_pred HHHHHHHHhHHH----HHHhhhcccccccceeeEEEEeCCeEEEeecCcceEEEE-eCCeeeecCCCCCCCChHHHHHHH
Q 016858 159 VASAFLQTDSAF----AEACSLDAALASGTTALAALVFGRRLVVANVGDCRAVLC-RRGKAIEMSRDHKPVCSKEKKRIE 233 (381)
Q Consensus 159 l~~af~~~~~~i----~~~~~~~~~~~~GtT~~~ali~~~~l~vanvGDSRa~l~-r~g~~~~lT~dH~~~~~~e~~Ri~ 233 (381)
+..+...+...+ ............+||++++++.++.++++|+||||+|++ ++|.+..++.+|.. +..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~----~~~--- 142 (212)
T PF13672_consen 70 IRAIKKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG----EYP--- 142 (212)
T ss_dssp HHHHHHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH----HHH---
T ss_pred HHHHHHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc----hhh---
Confidence 333333333222 011112234458999999999999999999999999754 89999999999972 111
Q ss_pred HcCCEEeccccCCeeccccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHH-HHHHHHHHH
Q 016858 234 ASGGYVYDGYLNGQLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQN-AVDFARRRL 312 (381)
Q Consensus 234 ~~gg~v~~~~~~g~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~e-i~~iv~~~~ 312 (381)
..+..+.... .....++..+++.++|.|| |||||||+.+...+ +..++...+
T Consensus 143 ---------------~~~~~~~~~~-----------~~~~~~~~~~~~~~~d~il-L~SDG~~~~l~~~~~~~~~l~~~~ 195 (212)
T PF13672_consen 143 ---------------NQTRSLTGDD-----------PEPDVQYGSIPLEEGDVIL-LCSDGVWDNLRSYEDLEQFLKDLW 195 (212)
T ss_dssp ---------------HCTTSCCHHC-----------CCTETEEEEEE--TT-EEE-EE-HHHHTTS-HHHHHHHH-----
T ss_pred ---------------hhhhccCccc-----------cccCCeEEEEEcCCCCEEE-EECcCccccCCCHHHHHHHhhhcc
Confidence 1122332211 2223467778888888544 99999999998655 666765544
Q ss_pred h
Q 016858 313 Q 313 (381)
Q Consensus 313 ~ 313 (381)
.
T Consensus 196 ~ 196 (212)
T PF13672_consen 196 N 196 (212)
T ss_dssp -
T ss_pred c
Confidence 3
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.75 E-value=1.5e-16 Score=142.89 Aligned_cols=175 Identities=20% Similarity=0.154 Sum_probs=128.7
Q ss_pred CCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCChHHHHHHHHHHHHHHhHHHHH
Q 016858 93 PTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQEIERVVASAFLQTDSAFAE 172 (381)
Q Consensus 93 ~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~~~~i~~~l~~af~~~~~~i~~ 172 (381)
...-|.|.+... +++..+++|+||||+...|.+++..+...+.+...... .+.+.+..+|+.+..
T Consensus 15 ~~~GD~~~~~~~-----------~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n~~l~~ 79 (193)
T smart00331 15 QVGGDFYDVVKL-----------PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI----SLSQILERLNRAIYE 79 (193)
T ss_pred hcCccEEEEEEe-----------CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHHHHHHh
Confidence 456788766544 34578999999999988999989888888765332211 245566677777765
Q ss_pred HhhhcccccccceeeEEEE--eCCeEEEeecCcceEEEEe-CCeeeecCCCCCCCChHHHHHHHHcCCEEeccccCCeec
Q 016858 173 ACSLDAALASGTTALAALV--FGRRLVVANVGDCRAVLCR-RGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLN 249 (381)
Q Consensus 173 ~~~~~~~~~~GtT~~~ali--~~~~l~vanvGDSRa~l~r-~g~~~~lT~dH~~~~~~e~~Ri~~~gg~v~~~~~~g~l~ 249 (381)
.. ....++|++++++ ..++++++|+||+|+|+++ ++..++.+.+.
T Consensus 80 ~~----~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~---------------------------- 127 (193)
T smart00331 80 NG----EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL---------------------------- 127 (193)
T ss_pred cC----CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC----------------------------
Confidence 41 2347999999998 5789999999999999998 66655555542
Q ss_pred cccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 016858 250 VARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEA 329 (381)
Q Consensus 250 ~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~ei~~iv~~~~~~~~~~~~~a~~Lv~~a 329 (381)
+..+|.. ...++++..+.+.++|. |+|+||||||.+..+++.+++.+.. ..+++++++++.+.+
T Consensus 128 -~~~lG~~------------~~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~~ 191 (193)
T smart00331 128 -GAPLGLE------------PDVEVDVRELTLEPGDL-LLLYTDGLTEARNPERLEELLEELL--GSPPAEIAQRILEEL 191 (193)
T ss_pred -CceeeeC------------CCCcceeEEEeeCCCCE-EEEECCCccccCChHHHHHHHHHhc--CCCHHHHHHHHHHHH
Confidence 2344432 22346778889999995 5599999999999999888887643 456888888888775
Q ss_pred H
Q 016858 330 L 330 (381)
Q Consensus 330 ~ 330 (381)
.
T Consensus 192 ~ 192 (193)
T smart00331 192 L 192 (193)
T ss_pred h
Confidence 4
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.62 E-value=2.4e-14 Score=153.00 Aligned_cols=189 Identities=18% Similarity=0.180 Sum_probs=135.4
Q ss_pred CCCCCCcceeeeecccccccCcCCCCCCceEEEEEcCCCChhHHHHHHHHhHHHHhhc--CCChHHHHHHHHHHHHHHhH
Q 016858 91 LRPTMEDVFLCVDNFMSDYGLKNLIDEPSAFYGMFDGHGGKHAADFASCHLPRFITED--EEFPQEIERVVASAFLQTDS 168 (381)
Q Consensus 91 ~R~~neD~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~--~~~~~~i~~~l~~af~~~~~ 168 (381)
.+..+.|.+.+... +++...++|+||+|....|..++..+.+.+.+. ..++ ...++..+|+
T Consensus 563 g~~vsGD~y~~~~l-----------~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~------~~~ai~~lN~ 625 (764)
T TIGR02865 563 GELVSGDSYSFGKL-----------SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD------REVAIKTVNS 625 (764)
T ss_pred CCcccCceEEEEEE-----------CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC------HHHHHHHHHH
Confidence 36678999877653 255678999999997777767776666665431 1222 2556777777
Q ss_pred HHHHHhhhcccccccceeeEEEEe--CCeEEEeecCcceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCCEEeccccCC
Q 016858 169 AFAEACSLDAALASGTTALAALVF--GRRLVVANVGDCRAVLCRRGKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNG 246 (381)
Q Consensus 169 ~i~~~~~~~~~~~~GtT~~~ali~--~~~l~vanvGDSRa~l~r~g~~~~lT~dH~~~~~~e~~Ri~~~gg~v~~~~~~g 246 (381)
.+.... ...+.+|+.+++++ .+++.++|+|+++.|+.|++.+..++..+.|
T Consensus 626 ~L~~~~----~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP----------------------- 678 (764)
T TIGR02865 626 ILSLRS----TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP----------------------- 678 (764)
T ss_pred HHHhCC----CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce-----------------------
Confidence 765431 12368999999996 6799999999999999999988888765443
Q ss_pred eeccccccCCCccccCCCCCCCCccccceEEEEEcCCCCeEEEEecCCCCCCCChHH-----HHHHHHHHHhcCCCHHHH
Q 016858 247 QLNVARALGDWHVEGMKGADGGPLSAEPELMSTKLTEEDEFLIIACDGVWDVFMSQN-----AVDFARRRLQEHNDPVMC 321 (381)
Q Consensus 247 ~l~~tralGd~~~~~~~~~~g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~e-----i~~iv~~~~~~~~~~~~~ 321 (381)
+|-. ...+++....++.+|| +||++||||||...+.+ +.+++.. ....+|++.
T Consensus 679 -------lGil------------~~~~~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~~~~~l~~~l~~--~~~~~p~el 736 (764)
T TIGR02865 679 -------IGIL------------DEVDVELVRKKLKNGD-LIVMVSDGVLEGEKEVEGKVLWLVRKLKE--TNTNDPEEI 736 (764)
T ss_pred -------eEec------------cCCccceEEEEeCCCC-EEEEECCCCCcCCcccccHHHHHHHHHHh--cCCCCHHHH
Confidence 1110 1235667788999999 56699999999876433 4444432 134689999
Q ss_pred HHHHHHHHHhCC---CCCCeEEEEEEe
Q 016858 322 SKDLVDEALKRK---SGDNLAVVVVCF 345 (381)
Q Consensus 322 a~~Lv~~a~~~g---~~DNiTvivV~~ 345 (381)
++.|++.+.+.. ..||+|++++++
T Consensus 737 a~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 737 AEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 999999997643 489999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.49 E-value=3.3e-12 Score=114.39 Aligned_cols=178 Identities=18% Similarity=0.174 Sum_probs=114.5
Q ss_pred CCceEEEEEcCCCChhHHHHHHHHhHHHHhhcCCChHHHHHHHHHHHHHHhHHHHHHhhhcccccccceeeEEEEe--CC
Q 016858 117 EPSAFYGMFDGHGGKHAADFASCHLPRFITEDEEFPQEIERVVASAFLQTDSAFAEACSLDAALASGTTALAALVF--GR 194 (381)
Q Consensus 117 ~~~~~~~V~DG~GG~~~a~~as~~l~~~l~~~~~~~~~i~~~l~~af~~~~~~i~~~~~~~~~~~~GtT~~~ali~--~~ 194 (381)
++..++.|+|+.|-...|.+.+..+...+........+ ..+.+..+|+.+....... ...+|++++.++ .+
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~---~~~~t~~~~~~d~~~~ 74 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD---NRYATACYAIIDPETG 74 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT---STTEEEEEEEEETTTT
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc---cccceEEEEEecccce
Confidence 45678999999995555555555555555431111111 3556667777775543221 367888888876 56
Q ss_pred eEEEeecCcceEEEEeC--CeeeecCCCCCCCChHHHHHHHHcCCEEeccccCCeeccccccCCCccccCCCCCCCCccc
Q 016858 195 RLVVANVGDCRAVLCRR--GKAIEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHVEGMKGADGGPLSA 272 (381)
Q Consensus 195 ~l~vanvGDSRa~l~r~--g~~~~lT~dH~~~~~~e~~Ri~~~gg~v~~~~~~g~l~~tralGd~~~~~~~~~~g~~~~~ 272 (381)
.++++|+|+++++++++ +....+.....| +|.. ...
T Consensus 75 ~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~~------------------------------lG~~------------~~~ 112 (193)
T PF07228_consen 75 TLTYANAGHPPPLLLRPGGREIEQLESEGPP------------------------------LGIF------------EDI 112 (193)
T ss_dssp EEEEEEESSSEEEEEETTCTEEEEETCSSBB------------------------------CSSS------------CTT
T ss_pred EEEEeCCCCCCEEEEeccccceeecccCccc------------------------------eeee------------ccc
Confidence 89999999999999998 334444332221 3321 123
Q ss_pred cceEEEEEcCCCCeEEEEecCCCCCCCChHH-------HHHHHHHHHhcCCCHHHHHHHHHHHHHh---CCCCCCeEEEE
Q 016858 273 EPELMSTKLTEEDEFLIIACDGVWDVFMSQN-------AVDFARRRLQEHNDPVMCSKDLVDEALK---RKSGDNLAVVV 342 (381)
Q Consensus 273 ~pdi~~~~l~~~d~fLvL~SDGlwd~l~~~e-------i~~iv~~~~~~~~~~~~~a~~Lv~~a~~---~g~~DNiTviv 342 (381)
.+....+++.++| .|+|+||||+|....+. +.+++.+. ...++++.++.|++.+.. ....||+|+++
T Consensus 113 ~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~ 189 (193)
T PF07228_consen 113 DYQEQEIQLEPGD-RLLLYTDGLFEALNEDGEFFGEERLLELLDEN--RGLSPQEIIDALLEAIDRFGKGPLRDDITVLV 189 (193)
T ss_dssp CEEEEEEE--TTE-EEEEECHHHCTTTCHHCHHCCCHHHHHHHHCH--TTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEE
T ss_pred cccceEEEecccc-EEEEeCCChhhccCCccchhHHHHHHHHHhhc--cCCCHHHHHHHHHHHHHHhcCCCCCCceEEEE
Confidence 4566788898998 46699999999984432 23443322 456799999999999876 35789999999
Q ss_pred EEeC
Q 016858 343 VCFQ 346 (381)
Q Consensus 343 V~~~ 346 (381)
++++
T Consensus 190 ~~~~ 193 (193)
T PF07228_consen 190 IRRQ 193 (193)
T ss_dssp EEE-
T ss_pred EEEC
Confidence 9874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.39 E-value=3.3e-05 Score=76.54 Aligned_cols=173 Identities=17% Similarity=0.173 Sum_probs=109.9
Q ss_pred CCceEEEEEcCCC-ChhHHHHHHHHhH---HHHhhc-CCChHHHHHHHHHHHHHHhHHHHHHhhhcccccccceeeEEEE
Q 016858 117 EPSAFYGMFDGHG-GKHAADFASCHLP---RFITED-EEFPQEIERVVASAFLQTDSAFAEACSLDAALASGTTALAALV 191 (381)
Q Consensus 117 ~~~~~~~V~DG~G-G~~~a~~as~~l~---~~l~~~-~~~~~~i~~~l~~af~~~~~~i~~~~~~~~~~~~GtT~~~ali 191 (381)
....+++|.|..| |-.++-. ..... +.+... ...+ ...+..+|+.+...... .+-+|+..+++
T Consensus 173 ~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p-------~~~l~~~n~~~~~~~~~----~~f~T~~~~~~ 240 (367)
T COG2208 173 EKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDP-------ADVLETLNRVLKQNLEE----DMFVTLFLGVY 240 (367)
T ss_pred CcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCH-------HHHHHHHHHHHHhcccC----CcEEEEEEEEE
Confidence 3677899999999 6555544 32222 222222 2222 23444445555443211 16778877777
Q ss_pred e--CCeEEEeecCcceEEEEeCCee---eecCCCCCCCChHHHHHHHHcCCEEeccccCCeeccccccCCCccccCCCCC
Q 016858 192 F--GRRLVVANVGDCRAVLCRRGKA---IEMSRDHKPVCSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHVEGMKGAD 266 (381)
Q Consensus 192 ~--~~~l~vanvGDSRa~l~r~g~~---~~lT~dH~~~~~~e~~Ri~~~gg~v~~~~~~g~l~~tralGd~~~~~~~~~~ 266 (381)
+ .+.+.++++|--=.++++.++. +.+.. ...++|..
T Consensus 241 d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~------------------------------~g~piG~~--------- 281 (367)
T COG2208 241 DLDSGELTYSNAGHEPALILSADGEIEVEDLTA------------------------------LGLPIGLL--------- 281 (367)
T ss_pred eccCCEEEEeeCCCCCeeEEEcCCCceeEEccC------------------------------CCceeeec---------
Confidence 6 5799999999998888876432 22221 12223322
Q ss_pred CCCccccceEEEEEcCCCCeEEEEecCCCCC-------CCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh----CCCC
Q 016858 267 GGPLSAEPELMSTKLTEEDEFLIIACDGVWD-------VFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALK----RKSG 335 (381)
Q Consensus 267 g~~~~~~pdi~~~~l~~~d~fLvL~SDGlwd-------~l~~~ei~~iv~~~~~~~~~~~~~a~~Lv~~a~~----~g~~ 335 (381)
....+.+....+.+|| .||+.|||+.+ .+..+...+++.+ ....+++++++.+.+.... ..-.
T Consensus 282 ---~~~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~i~~~l~~~~~~~~~~ 355 (367)
T COG2208 282 ---PDYQYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGR--LLGQPAEEILEAILESLEELQGDQIQD 355 (367)
T ss_pred ---CCccchheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHhhCCcccc
Confidence 3345666788888988 67799999999 4666777777665 3456788888887777654 3457
Q ss_pred CCeEEEEEEeC
Q 016858 336 DNLAVVVVCFQ 346 (381)
Q Consensus 336 DNiTvivV~~~ 346 (381)
||+|++++++.
T Consensus 356 DDiTll~lk~~ 366 (367)
T COG2208 356 DDITLLVLKVK 366 (367)
T ss_pred CceEEEEEEec
Confidence 88999999985
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=66.85 E-value=50 Score=31.61 Aligned_cols=50 Identities=10% Similarity=0.068 Sum_probs=33.6
Q ss_pred HHHHHHHhHHHHHHhhhcccccccceeeEEEEe--CCeEEEeecCcceEEEEeCCee
Q 016858 160 ASAFLQTDSAFAEACSLDAALASGTTALAALVF--GRRLVVANVGDCRAVLCRRGKA 214 (381)
Q Consensus 160 ~~af~~~~~~i~~~~~~~~~~~~GtT~~~ali~--~~~l~vanvGDSRa~l~r~g~~ 214 (381)
...+..+|+.+...... ...|++.++++ .+++.++++|-.-.++..++..
T Consensus 208 ~~~l~~lN~~l~~~~~~-----~~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 208 GALLKQVNHLLRQANLP-----GQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred HHHHHHHHHHHHhcCCC-----ceeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 55666777777664211 12578777877 4589999999999885444433
No 21
>PHA02606 5.1 hypothetical protein; Provisional
Probab=35.40 E-value=29 Score=30.03 Aligned_cols=28 Identities=36% Similarity=0.401 Sum_probs=17.5
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCcccc
Q 016858 3 ASEEIGRLENGSSSRSGRPPNPPTAADR 30 (381)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (381)
-+++||+|+|+.|+.++.-++|.++--|
T Consensus 122 ~~~~Ggsg~~~~~~~~~~e~~Ppp~p~~ 149 (179)
T PHA02606 122 PSESGGSGSGSNSSEGAGETNPPPAPVR 149 (179)
T ss_pred ccCCCCcCCCccccccccccCCCCCcee
Confidence 3556666666667667766777555445
No 22
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=31.93 E-value=91 Score=27.83 Aligned_cols=49 Identities=20% Similarity=0.390 Sum_probs=34.8
Q ss_pred CCeEEEEecCCCC-----------CCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCC
Q 016858 284 EDEFLIIACDGVW-----------DVFMSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRK 333 (381)
Q Consensus 284 ~d~fLvL~SDGlw-----------d~l~~~ei~~iv~~~~~~~~~~~~~a~~Lv~~a~~~g 333 (381)
+|. ++..|.|+| |+|.++..-+.+...+.+..-|.+.|++|++.-.+||
T Consensus 71 DDT-vLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDT-VLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCe-eEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 344 448888888 4456666666666555566679999999999877765
No 23
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=26.05 E-value=39 Score=25.28 Aligned_cols=18 Identities=22% Similarity=0.357 Sum_probs=13.1
Q ss_pred CCCeEEEEecCCCCCCCCh
Q 016858 283 EEDEFLIIACDGVWDVFMS 301 (381)
Q Consensus 283 ~~d~fLvL~SDGlwd~l~~ 301 (381)
.|.++| +++||+|=-+..
T Consensus 26 ~G~Rll-va~nGv~lEv~r 43 (72)
T PF09436_consen 26 PGHRLL-VASNGVFLEVRR 43 (72)
T ss_pred CCcEEE-EecCcEEEEEec
Confidence 566655 999999966443
No 24
>cd00534 DHNA_DHNTPE Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenoty
Probab=22.11 E-value=3.8e+02 Score=21.51 Aligned_cols=60 Identities=10% Similarity=0.130 Sum_probs=43.7
Q ss_pred EecCCCCCCCChHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeCCCCCC
Q 016858 290 IACDGVWDVFMSQNAVDFARRRLQE--HNDPVMCSKDLVDEALKRKSGDNLAVVVVCFQSQPPP 351 (381)
Q Consensus 290 L~SDGlwd~l~~~ei~~iv~~~~~~--~~~~~~~a~~Lv~~a~~~g~~DNiTvivV~~~~~~~~ 351 (381)
-.||-+-+.++-..+.+.+...+.+ .+..+..|+.|.+..+.. .+.+.-+-|++.+..+|
T Consensus 42 ~~~D~l~~tidY~~l~~~i~~~~~~~~~~llE~La~~ia~~i~~~--~~~v~~v~v~v~K~~~~ 103 (118)
T cd00534 42 GESDDLADTLNYAEVAKLIKKIVEGSPFKLIETLAEEIADILLED--YPKVSAIKVKVEKPNAP 103 (118)
T ss_pred hccCChhhccCHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHh--CCCceEEEEEEECCCCC
Confidence 3678888889999999888876653 346788899999988865 24555666666665544
No 25
>PF04155 Ground-like: Ground-like domain; InterPro: IPR007284 This group of proteins contain one or more copies of the ground-like domain, which are specific to Caenorhabditis elegans and Caenorhabditis briggsae. It has been proposed that the ground-like domain containing proteins may bind and modulate the activity of Patched-like membrane molecules, reminiscent of the modulating activities of neuropeptides [].
Probab=20.84 E-value=3e+02 Score=20.36 Aligned_cols=41 Identities=17% Similarity=0.273 Sum_probs=29.5
Q ss_pred ChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCCeEEEE
Q 016858 300 MSQNAVDFARRRLQEHNDPVMCSKDLVDEALKRKSGDNLAVVV 342 (381)
Q Consensus 300 ~~~ei~~iv~~~~~~~~~~~~~a~~Lv~~a~~~g~~DNiTviv 342 (381)
.++++.++|.+.+.. .++...++.|...+.+.-+. +..||+
T Consensus 7 n~~~L~~ii~~~~~~-~~~~~s~~~Iq~~~e~~f~~-~f~vIc 47 (76)
T PF04155_consen 7 NSEELRKIILKNMKE-CNLSISKRAIQKAAEKRFGG-SFEVIC 47 (76)
T ss_pred CCHHHHHHHHHHhcc-CCHHHHHHHHHHHHHHHhCC-CEEEEE
Confidence 567888888887654 67888888888877665444 666654
Done!