Query 016859
Match_columns 381
No_of_seqs 264 out of 1130
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 04:58:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f62_A Transcription factor WS 99.5 2.4E-15 8.2E-20 109.9 2.9 49 208-256 2-50 (51)
2 2ysm_A Myeloid/lymphoid or mix 99.5 8.3E-15 2.8E-19 122.5 5.9 97 151-257 9-105 (111)
3 3asl_A E3 ubiquitin-protein li 99.5 6.4E-15 2.2E-19 115.2 3.7 57 197-256 12-69 (70)
4 2e6s_A E3 ubiquitin-protein li 99.5 1E-14 3.5E-19 116.2 4.5 56 197-255 20-76 (77)
5 3shb_A E3 ubiquitin-protein li 99.5 8.2E-15 2.8E-19 116.8 3.5 56 197-255 20-76 (77)
6 2e6r_A Jumonji/ARID domain-con 99.5 6.2E-15 2.1E-19 120.8 2.3 58 197-256 9-66 (92)
7 1mm2_A MI2-beta; PHD, zinc fin 99.5 2.5E-14 8.5E-19 108.8 5.1 50 205-257 8-57 (61)
8 2kwj_A Zinc finger protein DPF 99.5 1.7E-14 5.9E-19 121.8 3.8 59 196-256 50-108 (114)
9 1xwh_A Autoimmune regulator; P 99.4 2.5E-14 8.6E-19 110.2 2.6 51 205-258 7-57 (66)
10 2lri_C Autoimmune regulator; Z 99.4 3.4E-14 1.2E-18 110.1 3.2 49 206-257 12-60 (66)
11 1fp0_A KAP-1 corepressor; PHD 99.4 8.3E-14 2.9E-18 113.8 5.7 49 206-257 25-73 (88)
12 2yql_A PHD finger protein 21A; 99.4 3.7E-14 1.3E-18 105.9 2.8 47 206-255 9-55 (56)
13 3v43_A Histone acetyltransfera 99.4 8.7E-14 3E-18 117.1 4.9 58 196-255 53-111 (112)
14 2l5u_A Chromodomain-helicase-D 99.4 5.3E-14 1.8E-18 107.0 2.6 49 205-256 10-58 (61)
15 1wev_A Riken cDNA 1110020M19; 99.4 5E-14 1.7E-18 114.4 2.0 55 205-259 15-75 (88)
16 2puy_A PHD finger protein 21A; 99.4 7E-14 2.4E-18 105.6 2.3 48 206-256 5-52 (60)
17 2yt5_A Metal-response element- 99.4 8.8E-14 3E-18 106.3 1.0 53 205-257 5-62 (66)
18 3ask_A E3 ubiquitin-protein li 99.3 3.2E-13 1.1E-17 127.0 4.1 56 198-256 169-225 (226)
19 3o36_A Transcription intermedi 99.3 1.3E-12 4.6E-17 117.6 4.2 49 206-257 4-52 (184)
20 2ku3_A Bromodomain-containing 99.3 4.4E-13 1.5E-17 105.2 0.9 49 206-256 16-66 (71)
21 3u5n_A E3 ubiquitin-protein li 99.3 1.8E-12 6.1E-17 119.1 3.9 51 205-258 6-56 (207)
22 2l43_A N-teminal domain from h 99.3 5.4E-13 1.8E-17 108.5 0.4 53 205-259 24-78 (88)
23 2ro1_A Transcription intermedi 99.2 3.1E-12 1.1E-16 116.7 4.2 49 206-257 2-50 (189)
24 2k16_A Transcription initiatio 99.1 1.8E-11 6.3E-16 95.7 2.7 52 205-256 17-68 (75)
25 4gne_A Histone-lysine N-methyl 98.9 3.1E-10 1.1E-14 95.6 3.3 47 205-256 14-62 (107)
26 2ysm_A Myeloid/lymphoid or mix 98.8 1.4E-09 4.8E-14 90.7 4.2 52 205-256 6-57 (111)
27 2lv9_A Histone-lysine N-methyl 98.8 2.1E-09 7.2E-14 88.7 4.8 49 207-257 29-77 (98)
28 1wen_A Inhibitor of growth fam 98.8 3E-09 1E-13 83.3 5.1 50 205-258 15-67 (71)
29 2vnf_A ING 4, P29ING4, inhibit 98.8 1.4E-09 4.7E-14 82.5 1.3 47 206-256 10-59 (60)
30 1weu_A Inhibitor of growth fam 98.7 9.2E-09 3.2E-13 84.4 5.4 50 205-258 35-87 (91)
31 3c6w_A P28ING5, inhibitor of g 98.7 2.4E-09 8.2E-14 81.0 1.4 47 206-256 9-58 (59)
32 2g6q_A Inhibitor of growth pro 98.7 4.8E-09 1.6E-13 80.1 1.6 47 206-256 11-60 (62)
33 2lbm_A Transcriptional regulat 98.6 3E-09 1E-13 93.8 -0.0 50 205-257 62-118 (142)
34 2jmi_A Protein YNG1, ING1 homo 98.6 1.6E-08 5.6E-13 82.8 2.5 46 206-255 26-75 (90)
35 3ql9_A Transcriptional regulat 98.4 2E-08 6.7E-13 87.3 -2.5 50 205-257 56-112 (129)
36 1x4i_A Inhibitor of growth pro 98.3 1.2E-07 3.9E-12 74.1 0.8 47 206-256 6-55 (70)
37 3o70_A PHD finger protein 13; 98.3 2.9E-07 1E-11 71.3 2.8 49 206-256 19-67 (68)
38 2kwj_A Zinc finger protein DPF 98.2 2E-07 6.7E-12 78.5 -0.2 50 207-256 2-61 (114)
39 1we9_A PHD finger family prote 98.2 5.8E-07 2E-11 68.0 2.0 53 206-258 6-60 (64)
40 3v43_A Histone acetyltransfera 98.1 3.4E-07 1.2E-11 76.8 -1.1 51 206-256 5-64 (112)
41 1wee_A PHD finger family prote 98.0 1.5E-06 5.1E-11 67.5 1.6 51 206-257 16-67 (72)
42 2xb1_A Pygopus homolog 2, B-ce 97.9 1.5E-06 5.2E-11 72.5 0.3 50 207-258 4-63 (105)
43 2vpb_A Hpygo1, pygopus homolog 97.9 9.7E-07 3.3E-11 68.0 -0.9 48 205-254 7-64 (65)
44 1wem_A Death associated transc 97.9 8.5E-07 2.9E-11 69.4 -2.0 49 206-257 16-71 (76)
45 1wew_A DNA-binding family prot 97.8 3.1E-06 1.1E-10 66.8 0.9 50 206-258 16-74 (78)
46 3o7a_A PHD finger protein 13 v 97.8 4.7E-06 1.6E-10 61.0 1.7 47 207-255 5-51 (52)
47 1wep_A PHF8; structural genomi 97.8 4E-06 1.4E-10 66.2 1.3 52 206-258 12-65 (79)
48 2rsd_A E3 SUMO-protein ligase 97.8 5.4E-06 1.8E-10 63.8 1.6 47 207-256 11-65 (68)
49 2ri7_A Nucleosome-remodeling f 97.8 1.8E-06 6.3E-11 76.5 -1.7 51 206-257 8-60 (174)
50 2kgg_A Histone demethylase jar 97.6 6E-06 2E-10 60.5 -0.3 45 208-254 4-52 (52)
51 3kqi_A GRC5, PHD finger protei 97.4 2.4E-05 8.3E-10 61.1 -0.1 51 207-258 11-63 (75)
52 1wil_A KIAA1045 protein; ring 97.4 3.4E-05 1.2E-09 62.7 0.5 51 205-256 14-76 (89)
53 3lqh_A Histone-lysine N-methyl 97.1 0.00011 3.7E-09 67.0 1.3 53 207-259 3-66 (183)
54 3kv5_D JMJC domain-containing 96.7 0.00014 4.7E-09 75.1 -1.6 51 206-259 37-91 (488)
55 4bbq_A Lysine-specific demethy 96.7 0.00049 1.7E-08 57.2 1.7 41 217-257 71-115 (117)
56 4gne_A Histone-lysine N-methyl 96.3 0.0021 7.3E-08 53.9 3.4 48 196-250 51-98 (107)
57 3pur_A Lysine-specific demethy 96.2 0.0012 4E-08 68.8 1.5 40 217-258 54-96 (528)
58 3kv4_A PHD finger protein 8; e 95.0 0.0016 5.5E-08 66.6 -3.0 48 208-258 7-58 (447)
59 4ap4_A E3 ubiquitin ligase RNF 93.8 0.0029 9.9E-08 51.8 -3.5 104 148-257 6-123 (133)
60 2e61_A Zinc finger CW-type PWW 92.3 0.032 1.1E-06 43.4 0.6 20 349-381 12-31 (69)
61 2ku7_A MLL1 PHD3-CYP33 RRM chi 91.0 0.043 1.5E-06 45.0 0.1 38 220-257 1-45 (140)
62 2pv0_B DNA (cytosine-5)-methyl 90.6 0.032 1.1E-06 56.1 -1.3 50 205-257 92-149 (386)
63 2l7p_A Histone-lysine N-methyl 89.2 0.083 2.8E-06 43.9 0.4 18 349-381 22-39 (100)
64 3a1b_A DNA (cytosine-5)-methyl 85.2 0.14 4.8E-06 45.8 -0.5 50 205-257 78-135 (159)
65 4bbq_A Lysine-specific demethy 83.0 0.17 6E-06 41.6 -0.8 36 207-256 8-43 (117)
66 3rsn_A SET1/ASH2 histone methy 80.6 1.4 4.6E-05 40.0 4.0 48 212-259 10-62 (177)
67 1iym_A EL5; ring-H2 finger, ub 70.6 2 6.7E-05 29.8 1.8 47 206-256 5-52 (55)
68 1vyx_A ORF K3, K3RING; zinc-bi 70.2 0.37 1.3E-05 35.8 -2.2 48 206-256 6-56 (60)
69 2ysl_A Tripartite motif-contai 69.7 5 0.00017 29.2 4.1 34 145-178 16-51 (73)
70 2ep4_A Ring finger protein 24; 68.8 3.2 0.00011 30.5 2.8 46 146-193 12-62 (74)
71 1x4j_A Ring finger protein 38; 68.0 2.7 9.3E-05 31.2 2.3 44 147-192 21-69 (75)
72 2ect_A Ring finger protein 126 67.6 4.4 0.00015 30.0 3.4 45 147-193 13-62 (78)
73 2d8s_A Cellular modulator of i 65.9 2.6 8.8E-05 32.8 1.8 50 206-257 15-68 (80)
74 2kiz_A E3 ubiquitin-protein li 65.1 0.96 3.3E-05 33.0 -0.8 48 206-257 14-61 (69)
75 1v87_A Deltex protein 2; ring- 64.6 2.8 9.6E-05 33.5 1.9 48 150-197 26-96 (114)
76 2ea6_A Ring finger protein 4; 63.7 2.6 8.9E-05 30.2 1.4 44 146-191 12-64 (69)
77 2ect_A Ring finger protein 126 62.8 3.5 0.00012 30.6 2.0 48 206-257 15-62 (78)
78 2ysj_A Tripartite motif-contai 61.7 6.3 0.00021 28.0 3.1 34 145-178 16-51 (63)
79 1iym_A EL5; ring-H2 finger, ub 59.8 8.9 0.0003 26.3 3.6 42 147-190 3-50 (55)
80 1x4j_A Ring finger protein 38; 58.7 1.7 5.8E-05 32.3 -0.4 48 206-257 23-70 (75)
81 2egp_A Tripartite motif-contai 58.2 8.7 0.0003 28.3 3.5 33 146-178 9-43 (79)
82 2ecl_A Ring-box protein 2; RNF 58.1 2.3 7.9E-05 32.5 0.2 45 208-256 28-73 (81)
83 2djb_A Polycomb group ring fin 56.5 7.3 0.00025 28.6 2.8 44 147-192 13-59 (72)
84 2ecv_A Tripartite motif-contai 55.1 13 0.00044 27.4 4.0 33 145-177 15-49 (85)
85 2kiz_A E3 ubiquitin-protein li 54.0 9.6 0.00033 27.5 3.1 43 148-192 13-60 (69)
86 2d8t_A Dactylidin, ring finger 54.0 7.7 0.00026 28.4 2.6 44 148-193 14-59 (71)
87 2ecm_A Ring finger and CHY zin 54.0 2 6.7E-05 29.7 -0.7 47 206-256 5-52 (55)
88 2l0b_A E3 ubiquitin-protein li 53.4 1.8 6.2E-05 33.7 -1.1 47 206-256 40-86 (91)
89 2ecj_A Tripartite motif-contai 51.8 14 0.00049 25.3 3.6 32 146-177 12-45 (58)
90 1weq_A PHD finger protein 7; s 50.3 13 0.00046 29.8 3.5 34 219-255 44-78 (85)
91 2ct0_A Non-SMC element 1 homol 50.1 5.8 0.0002 30.7 1.3 47 206-256 15-61 (74)
92 2ecw_A Tripartite motif-contai 48.9 14 0.00048 27.2 3.3 33 146-178 16-50 (85)
93 1v87_A Deltex protein 2; ring- 48.1 2.5 8.4E-05 33.8 -1.1 35 224-258 58-93 (114)
94 2egp_A Tripartite motif-contai 47.7 12 0.00042 27.4 2.8 49 206-257 12-63 (79)
95 2ep4_A Ring finger protein 24; 47.3 1.6 5.5E-05 32.2 -2.2 50 206-259 15-64 (74)
96 1e4u_A Transcriptional repress 46.2 17 0.0006 27.8 3.5 46 146-192 8-59 (78)
97 1chc_A Equine herpes virus-1 r 45.8 12 0.0004 26.9 2.4 44 148-193 4-50 (68)
98 2yur_A Retinoblastoma-binding 44.4 12 0.00043 27.6 2.4 44 148-191 14-60 (74)
99 2ecy_A TNF receptor-associated 44.2 4.3 0.00015 29.3 -0.2 46 206-257 15-60 (66)
100 3ng2_A RNF4, snurf, ring finge 44.0 6.7 0.00023 28.3 0.8 45 146-192 7-60 (71)
101 3k1l_B Fancl; UBC, ring, RWD, 43.9 6 0.00021 39.7 0.7 51 206-256 308-370 (381)
102 3l11_A E3 ubiquitin-protein li 43.5 8.1 0.00028 30.9 1.3 46 206-257 15-60 (115)
103 2l0b_A E3 ubiquitin-protein li 43.0 11 0.00038 29.1 2.0 42 148-191 39-85 (91)
104 2ct2_A Tripartite motif protei 41.7 17 0.00059 27.1 2.9 33 146-178 12-50 (88)
105 1g25_A CDK-activating kinase a 41.2 14 0.00048 26.4 2.2 43 149-192 3-52 (65)
106 2csy_A Zinc finger protein 183 39.7 16 0.00054 27.3 2.3 43 148-192 14-58 (81)
107 2k1p_A Zinc finger RAN-binding 39.4 11 0.00037 24.9 1.2 14 243-256 2-15 (33)
108 2ecn_A Ring finger protein 141 37.0 21 0.00073 25.6 2.6 45 146-192 12-57 (70)
109 4a0k_B E3 ubiquitin-protein li 36.3 7.7 0.00026 32.5 0.1 28 225-256 82-109 (117)
110 1bor_A Transcription factor PM 36.0 28 0.00097 24.3 3.1 42 206-257 6-47 (56)
111 3ztg_A E3 ubiquitin-protein li 35.3 11 0.00038 28.7 0.9 46 147-192 11-59 (92)
112 2xag_B REST corepressor 1; ami 35.2 8 0.00027 39.9 0.0 19 297-315 99-117 (482)
113 2xeu_A Ring finger protein 4; 34.9 8 0.00027 27.1 -0.0 42 149-192 3-53 (64)
114 3dpl_R Ring-box protein 1; ubi 34.0 7.4 0.00025 31.8 -0.4 31 222-256 68-98 (106)
115 4ayc_A E3 ubiquitin-protein li 32.2 14 0.00047 30.8 1.0 41 150-192 54-96 (138)
116 2lk0_A RNA-binding protein 5; 31.8 10 0.00034 24.8 0.0 12 245-256 3-14 (32)
117 2lq6_A Bromodomain-containing 30.6 12 0.00041 29.7 0.3 30 207-237 18-49 (87)
118 3dpl_R Ring-box protein 1; ubi 30.0 26 0.00089 28.4 2.3 27 164-192 72-98 (106)
119 3nw0_A Non-structural maintena 29.5 14 0.00046 34.4 0.5 47 206-256 180-226 (238)
120 2y43_A E3 ubiquitin-protein li 28.7 23 0.00078 27.4 1.7 44 148-193 21-67 (99)
121 1jm7_A BRCA1, breast cancer ty 28.6 12 0.00039 29.5 -0.1 48 206-257 21-68 (112)
122 2kn9_A Rubredoxin; metalloprot 26.6 37 0.0013 26.9 2.5 20 240-260 54-73 (81)
123 3lrq_A E3 ubiquitin-protein li 26.3 15 0.00052 28.8 0.2 45 148-193 21-68 (100)
124 2ckl_B Ubiquitin ligase protei 25.5 24 0.00083 30.0 1.4 41 150-191 55-98 (165)
125 2ckl_A Polycomb group ring fin 23.7 26 0.00088 27.6 1.1 43 148-192 14-59 (108)
126 1t1h_A Gspef-atpub14, armadill 23.2 31 0.0011 25.3 1.4 45 147-192 6-52 (78)
127 3fl2_A E3 ubiquitin-protein li 23.1 6.5 0.00022 32.0 -2.6 46 206-257 52-97 (124)
128 4gut_A Lysine-specific histone 22.6 17 0.00058 39.1 -0.2 16 353-381 91-106 (776)
129 1e8j_A Rubredoxin; iron-sulfur 22.5 1.1E+02 0.0037 22.0 4.2 18 241-259 31-48 (52)
130 2ckl_B Ubiquitin ligase protei 21.6 12 0.00043 31.8 -1.3 47 206-257 54-100 (165)
131 6rxn_A Rubredoxin; electron tr 21.5 44 0.0015 23.7 1.8 19 240-259 24-42 (46)
132 1faq_A RAF-1; transferase, ser 21.2 52 0.0018 22.7 2.2 29 207-237 15-43 (52)
133 4b2u_A S67; toxin, ICK; NMR {S 20.1 28 0.00097 23.2 0.5 14 245-258 16-29 (36)
No 1
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.53 E-value=2.4e-15 Score=109.88 Aligned_cols=49 Identities=35% Similarity=0.946 Sum_probs=46.2
Q ss_pred ccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 208 SCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 208 ~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
+|.+|+++++.+.||+||.|+++||++|+.|+|.++|.|+|+|+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 5999999998889999999999999999999999999999999999753
No 2
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.52 E-value=8.3e-15 Score=122.46 Aligned_cols=97 Identities=27% Similarity=0.546 Sum_probs=72.8
Q ss_pred CCCCccccccCCCCCccchhhhhhhccccccccccccccccccccccCCccccccccccccccccCCCCCeEEeccCCCC
Q 016859 151 NSDISRLEVLDEDPSAREFCVSVLRSNGLLGAVGECSVRSVASGEVSGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEA 230 (381)
Q Consensus 151 eCp~~~~~~~~ee~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t~~~~~~~~~~~~~~~~C~vC~~~~~~~~LLlCD~Cd~a 230 (381)
.|.+|... .++....+|..+-+ .+| ..|......+..+..|.|++| .+|.+|++.++++.||+||.|+++
T Consensus 9 ~C~~C~~~---g~~~~ll~C~~C~~----~~H-~~Cl~~~~~~~~~~~W~C~~C--~~C~~C~~~~~~~~ll~Cd~C~~~ 78 (111)
T 2ysm_A 9 NCAVCDSP---GDLLDQFFCTTCGQ----HYH-GMCLDIAVTPLKRAGWQCPEC--KVCQNCKQSGEDSKMLVCDTCDKG 78 (111)
T ss_dssp CBTTTCCC---CCTTTSEECSSSCC----EEC-TTTTTCCCCTTTSTTCCCTTT--CCCTTTCCCSCCTTEEECSSSCCE
T ss_pred CCcCCCCC---CCCcCCeECCCCCC----CcC-hHHhCCccccccccCccCCcC--CcccccCccCCCCCeeECCCCCcH
Confidence 46666552 22233345554432 222 456555444445678999998 689999999988999999999999
Q ss_pred CCCcccCCCCCCCCCCCccCccccCCC
Q 016859 231 FHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 231 yH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
||++||.|||..+|.|+|||+.|....
T Consensus 79 yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 79 YHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp EEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred HhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 999999999999999999999998764
No 3
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.50 E-value=6.4e-15 Score=115.21 Aligned_cols=57 Identities=33% Similarity=0.859 Sum_probs=52.2
Q ss_pred cCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCC-CccCccccCC
Q 016859 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTD-NWLCQCCSNL 256 (381)
Q Consensus 197 ~~~~~~~~~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G-~W~Cp~C~~~ 256 (381)
..|.|..+ .|.+|++.++.+.||+||.|+++||++||.|||.++|+| +|+|+.|...
T Consensus 12 ~~w~C~~C---~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 12 VNRLCRVC---ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp TTSCCTTT---SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCeECCCC---CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 45888776 899999988888999999999999999999999999999 9999999854
No 4
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=1e-14 Score=116.20 Aligned_cols=56 Identities=32% Similarity=0.856 Sum_probs=51.1
Q ss_pred cCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCC-CccCccccC
Q 016859 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTD-NWLCQCCSN 255 (381)
Q Consensus 197 ~~~~~~~~~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G-~W~Cp~C~~ 255 (381)
..|.|.++ .|.+|++.++.+.||+||.|+++||++||.|||..+|.| +|||+.|..
T Consensus 20 ~~w~C~~c---~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 20 PEKKCHSC---SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCCSSS---SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCeECCCC---CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 45877665 899999988888999999999999999999999999999 999999974
No 5
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.49 E-value=8.2e-15 Score=116.84 Aligned_cols=56 Identities=34% Similarity=0.906 Sum_probs=52.0
Q ss_pred cCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCC-ccCccccC
Q 016859 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDN-WLCQCCSN 255 (381)
Q Consensus 197 ~~~~~~~~~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~-W~Cp~C~~ 255 (381)
..|.|..| .|.+|++.++++.||+||.|+++||++||.|||..+|.|+ |||+.|+.
T Consensus 20 ~~W~C~~C---~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 20 VNRLCRVC---ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTSCCTTT---SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCCCCCC---cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 56999887 7999999999999999999999999999999999999999 99999975
No 6
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=6.2e-15 Score=120.81 Aligned_cols=58 Identities=29% Similarity=0.704 Sum_probs=51.7
Q ss_pred cCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 197 ~~~~~~~~~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
+.|++.+. ..|.+|+++++.+.||+||.|+++||++||.|||..+|.|+|||+.|+..
T Consensus 9 s~~~~~~~--~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 9 SSAQFIDS--YICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCC--CCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred chhhccCC--CCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 34655554 78999999998889999999999999999999999999999999999865
No 7
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.48 E-value=2.5e-14 Score=108.83 Aligned_cols=50 Identities=30% Similarity=0.897 Sum_probs=45.6
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
.+.+|.+|++++ .||+||.|+++||++|+.|||+++|.|+|+|+.|....
T Consensus 8 ~~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 8 HMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SCSSCTTTCCCS---SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCCcCCCCCCCC---CEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 357899999876 69999999999999999999999999999999998764
No 8
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.47 E-value=1.7e-14 Score=121.84 Aligned_cols=59 Identities=34% Similarity=0.782 Sum_probs=54.7
Q ss_pred ccCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 196 VSGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 196 ~~~~~~~~~~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
...|.|..| .+|.+|++.++.+.||+||.|+++||++||.|||..+|.|+|||+.|...
T Consensus 50 ~~~W~C~~C--~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 50 TYKWQCIEC--KSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp HTTCCCGGG--CCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred CCccCcccc--CccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 457999998 78999999988889999999999999999999999999999999999754
No 9
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.44 E-value=2.5e-14 Score=110.20 Aligned_cols=51 Identities=27% Similarity=0.832 Sum_probs=46.1
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~~ 258 (381)
.+.+|.+|+.++ .||+||.|+++||++|+.|||..+|.|+|+|+.|...+.
T Consensus 7 ~~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 7 NEDECAVCRDGG---ELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp CCCSBSSSSCCS---SCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCccCCCCC---CEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 357899999876 699999999999999999999999999999999987643
No 10
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.44 E-value=3.4e-14 Score=110.08 Aligned_cols=49 Identities=31% Similarity=0.621 Sum_probs=44.3
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
...|.+|++++ .||+||.|+++||++||.|+|..+|.|+|||+.|....
T Consensus 12 ~~~C~vC~~~~---~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 12 GARCGVCGDGT---DVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TCCCTTTSCCT---TCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCcCCCCCCC---eEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 35799999776 59999999999999999999999999999999997653
No 11
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.44 E-value=8.3e-14 Score=113.81 Aligned_cols=49 Identities=29% Similarity=0.884 Sum_probs=45.5
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
+.+|.+|++++ .||+||.|+++||++|+.|||.++|.|+|+|+.|....
T Consensus 25 ~~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 25 ATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSCCSSSCSSS---CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCcCcCcCCCC---CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 47899999887 59999999999999999999999999999999998653
No 12
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=3.7e-14 Score=105.86 Aligned_cols=47 Identities=32% Similarity=1.007 Sum_probs=43.8
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~ 255 (381)
+.+|.+|++++ .||+||.|+++||++|+.|||+.+|.|+|+|+.|..
T Consensus 9 ~~~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 9 EDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSCSSSCCSS---CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCccCCCCC---eEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 57899999876 699999999999999999999999999999999975
No 13
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.42 E-value=8.7e-14 Score=117.06 Aligned_cols=58 Identities=33% Similarity=0.855 Sum_probs=52.9
Q ss_pred ccCCcccccccccccccccc-CCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccC
Q 016859 196 VSGTGHEISVIQSCKLCGKA-DNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (381)
Q Consensus 196 ~~~~~~~~~~~~~C~vC~~~-~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~ 255 (381)
...|.|.+| .+|.+|++. .+++.||+||.|+++||++||.|||.++|+|+|||+.|+.
T Consensus 53 ~~~W~C~~C--~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 53 ALRWQCIEC--KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp TSCCCCTTT--CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccccC--CccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 567999998 689999986 4567899999999999999999999999999999999975
No 14
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.41 E-value=5.3e-14 Score=107.00 Aligned_cols=49 Identities=29% Similarity=0.864 Sum_probs=45.0
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
.+.+|.+|++++ .||+||.|+++||++|+.|||+++|.|+|+|+.|...
T Consensus 10 ~~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQGG---EIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCCS---SEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCccCCCCC---cEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 357899999876 7999999999999999999999999999999999764
No 15
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.40 E-value=5e-14 Score=114.43 Aligned_cols=55 Identities=20% Similarity=0.616 Sum_probs=48.0
Q ss_pred cccccccccccCC--CCCeEEeccCCCCCCCcccCCCCCC----CCCCCccCccccCCCCc
Q 016859 205 VIQSCKLCGKADN--TSTMLLCDYCDEAFHPSCCNPRIKI----LPTDNWLCQCCSNLNSN 259 (381)
Q Consensus 205 ~~~~C~vC~~~~~--~~~LLlCD~Cd~ayH~~CL~PPL~~----iP~G~W~Cp~C~~~~~~ 259 (381)
.+.+|.+|++++. .+.||+||.|+++||++||.|||.. +|.|+|||+.|+.....
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~ 75 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKR 75 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhh
Confidence 3578999998864 3689999999999999999999995 99999999999876543
No 16
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.39 E-value=7e-14 Score=105.62 Aligned_cols=48 Identities=31% Similarity=0.975 Sum_probs=44.6
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
+.+|.+|++++ .||+||.|+++||++|+.|||..+|.|+|+|+.|...
T Consensus 5 ~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 5 EDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CSSCTTTCCCS---SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCcCCCCCC---cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 57899999876 6999999999999999999999999999999999754
No 17
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.36 E-value=8.8e-14 Score=106.31 Aligned_cols=53 Identities=26% Similarity=0.842 Sum_probs=46.2
Q ss_pred ccccccccccc--CCCCCeEEeccCCCCCCCcccCCCCCC--C-CCCCccCccccCCC
Q 016859 205 VIQSCKLCGKA--DNTSTMLLCDYCDEAFHPSCCNPRIKI--L-PTDNWLCQCCSNLN 257 (381)
Q Consensus 205 ~~~~C~vC~~~--~~~~~LLlCD~Cd~ayH~~CL~PPL~~--i-P~G~W~Cp~C~~~~ 257 (381)
.+.+|.+|+.+ .+.+.||+||.|+++||++|+.|||.+ + |.|+|||+.|....
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 35789999987 345799999999999999999999987 4 99999999998654
No 18
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.35 E-value=3.2e-13 Score=126.96 Aligned_cols=56 Identities=34% Similarity=0.880 Sum_probs=45.8
Q ss_pred CCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCC-CccCccccCC
Q 016859 198 GTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTD-NWLCQCCSNL 256 (381)
Q Consensus 198 ~~~~~~~~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G-~W~Cp~C~~~ 256 (381)
.|.|..| .|.+|++.++.+.||+||.|+++||++||.|||..+|.| +|+|+.|...
T Consensus 169 ~w~C~~c---~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 169 NRLCRVC---ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TSCCTTT---SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CEecCCC---CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 4666554 899999988888999999999999999999999999999 9999999753
No 19
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.28 E-value=1.3e-12 Score=117.61 Aligned_cols=49 Identities=31% Similarity=0.922 Sum_probs=45.5
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
+++|.+|+++| .||+||.|+++||++|+.|+|..+|.|+|+|+.|....
T Consensus 4 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 4 EDWCAVCQNGG---ELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp CSSCTTTCCCS---SCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCccccCCCCC---eeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 47899999887 59999999999999999999999999999999998764
No 20
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.28 E-value=4.4e-13 Score=105.21 Aligned_cols=49 Identities=31% Similarity=0.872 Sum_probs=44.3
Q ss_pred ccccccccccC--CCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKAD--NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~--~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
+.+|.+|++++ +++.||+||.|+++||++|+.|++ +|+|+|||+.|...
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQS 66 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcCc
Confidence 57899999886 778999999999999999999884 99999999999765
No 21
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.26 E-value=1.8e-12 Score=119.11 Aligned_cols=51 Identities=25% Similarity=0.858 Sum_probs=46.4
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~~ 258 (381)
.+++|.+|++++ .||+||+|+++||++|+.|||..+|.|+|+|+.|.....
T Consensus 6 ~~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 6 NEDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SCSSBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 357899999888 499999999999999999999999999999999997643
No 22
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.26 E-value=5.4e-13 Score=108.51 Aligned_cols=53 Identities=28% Similarity=0.805 Sum_probs=46.4
Q ss_pred cccccccccccC--CCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCCc
Q 016859 205 VIQSCKLCGKAD--NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNSN 259 (381)
Q Consensus 205 ~~~~C~vC~~~~--~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~~~ 259 (381)
.+.+|.+|+.++ +.+.||+||.|+.+||++|+.|++ +|.|+|||+.|......
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~~~ 78 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSRAR 78 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHTTS
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCccch
Confidence 357899999886 667899999999999999999985 99999999999876543
No 23
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.24 E-value=3.1e-12 Score=116.65 Aligned_cols=49 Identities=29% Similarity=0.884 Sum_probs=45.3
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
+++|.+|++++ .||+||+|+++||++|+.|+|..+|.|+|+|+.|....
T Consensus 2 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCCS---SCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCCC---ceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 46899999887 59999999999999999999999999999999998763
No 24
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.12 E-value=1.8e-11 Score=95.69 Aligned_cols=52 Identities=33% Similarity=0.664 Sum_probs=47.5
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
...+|.+|++.++.+.||+||.|+.+||++|+.+++..+|.++|+|+.|...
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 3478999999988778999999999999999999999999999999999765
No 25
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.94 E-value=3.1e-10 Score=95.59 Aligned_cols=47 Identities=28% Similarity=0.680 Sum_probs=42.4
Q ss_pred cccccccccccCCCCCeEEec--cCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD--~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
.+++|.+|++++ .||+|| .|+++||++||. |..+|.|+||||.|...
T Consensus 14 ~~~~C~~C~~~G---~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 14 HEDYCFQCGDGG---ELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCD 62 (107)
T ss_dssp SCSSCTTTCCCS---EEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCT
T ss_pred CCCCCCcCCCCC---cEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCC
Confidence 357899999776 699999 899999999999 99999999999999755
No 26
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.85 E-value=1.4e-09 Score=90.65 Aligned_cols=52 Identities=19% Similarity=0.602 Sum_probs=47.1
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
.+++|.+|+.+++.+.||+|+.|+++||++||.|++..++.+.|+|+.|...
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C 57 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVC 57 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCCC
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCcc
Confidence 3578999999998778999999999999999999998889999999999744
No 27
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.84 E-value=2.1e-09 Score=88.71 Aligned_cols=49 Identities=29% Similarity=0.718 Sum_probs=43.4
Q ss_pred cccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 207 ~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
..| +|+..++...||+||.|+.+||+.|+.|++..+|. .|+|+.|....
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~~ 77 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPRN 77 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSSC
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCCC
Confidence 557 78888878899999999999999999999999985 89999997654
No 28
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.83 E-value=3e-09 Score=83.33 Aligned_cols=50 Identities=32% Similarity=0.790 Sum_probs=42.4
Q ss_pred cccccccccccCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCccCccccCCCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~--Cd-~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~~ 258 (381)
...+| +|++..+ ..||.||. |+ .+||+.|+. |+.+|.|.|||+.|.....
T Consensus 15 ~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 15 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 67 (71)
T ss_dssp SCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCSS
T ss_pred CCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCcccc
Confidence 35789 7998754 47999999 77 699999999 8999999999999987643
No 29
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.77 E-value=1.4e-09 Score=82.46 Aligned_cols=47 Identities=34% Similarity=0.845 Sum_probs=40.0
Q ss_pred ccccccccccCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~--Cd-~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
..+| +|++..+ ..||.||. |+ .+||+.|+. |+.+|.|.|||+.|..+
T Consensus 10 ~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 10 PTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC-
T ss_pred CCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccCc
Confidence 4678 8998764 57999999 55 799999999 89999999999999754
No 30
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.74 E-value=9.2e-09 Score=84.40 Aligned_cols=50 Identities=32% Similarity=0.790 Sum_probs=42.4
Q ss_pred cccccccccccCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCccCccccCCCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~--Cd-~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~~ 258 (381)
...+| +|++..+ ..||.||. |+ .+||+.|+. |+.+|.|.|||+.|.....
T Consensus 35 e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 35 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCCS
T ss_pred CCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcCC
Confidence 35788 9998765 47999999 66 799999999 8999999999999987643
No 31
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.72 E-value=2.4e-09 Score=81.02 Aligned_cols=47 Identities=32% Similarity=0.829 Sum_probs=40.6
Q ss_pred ccccccccccCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~--Cd-~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
..+| +|++..+ ..|+.||. |+ .+||+.|+. |+.+|.|.|||+.|..+
T Consensus 9 ~~yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 9 PTYC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CcEE-ECCCCCC-CCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccCc
Confidence 4678 8998654 47999999 77 699999999 89999999999999764
No 32
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.66 E-value=4.8e-09 Score=80.13 Aligned_cols=47 Identities=32% Similarity=0.725 Sum_probs=40.2
Q ss_pred ccccccccccCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd---~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
..+| +|++..+ ..||.||.|+ ..||+.|+. |+..|.|.|||+.|...
T Consensus 11 ~~yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 11 PTYC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTC
T ss_pred CcEE-ECCCCCC-CCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccC
Confidence 4678 8998654 3799999954 999999999 78899999999999765
No 33
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.65 E-value=3e-09 Score=93.75 Aligned_cols=50 Identities=22% Similarity=0.731 Sum_probs=44.5
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCCC-----C--CCCCCccCccccCCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIK-----I--LPTDNWLCQCCSNLN 257 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~-----~--iP~G~W~Cp~C~~~~ 257 (381)
.+++|.+|+.++ .||+||.|+++||..|+.|+|. + .|.|+|+|+.|....
T Consensus 62 ~~d~C~vC~~GG---~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 62 MDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp CBCSCSSSCCCS---SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred CCCeecccCCCC---cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 468999999999 5999999999999999999986 2 599999999998653
No 34
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.58 E-value=1.6e-08 Score=82.77 Aligned_cols=46 Identities=30% Similarity=0.743 Sum_probs=39.9
Q ss_pred ccccccccccCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCccCcc-ccC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQC-CSN 255 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd---~ayH~~CL~PPL~~iP~G~W~Cp~-C~~ 255 (381)
..+| +|++.... .||.||.|+ .+||+.|+. |+..|.|.|||+. |..
T Consensus 26 ~~yC-iC~~~~~g-~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 26 EVYC-FCRNVSYG-PMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp SCCS-TTTCCCSS-SEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CcEE-EeCCCCCC-CEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 4678 89986654 699999977 899999999 8999999999999 973
No 35
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.36 E-value=2e-08 Score=87.26 Aligned_cols=50 Identities=22% Similarity=0.785 Sum_probs=43.5
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCCC-----CCC--CCCCccCccccCCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRI-----KIL--PTDNWLCQCCSNLN 257 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL-----~~i--P~G~W~Cp~C~~~~ 257 (381)
.+.+|.+|+.++ .|++||.|+++||..|+.|+| .++ |.++|+|+.|....
T Consensus 56 ~~~~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~p 112 (129)
T 3ql9_A 56 MDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEP 112 (129)
T ss_dssp CBSSCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGG
T ss_pred CCCcCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHH
Confidence 457899999998 599999999999999999985 355 89999999997653
No 36
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.30 E-value=1.2e-07 Score=74.09 Aligned_cols=47 Identities=30% Similarity=0.704 Sum_probs=39.5
Q ss_pred ccccccccccCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd---~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
..+|. |++..+. .||.||.|+ ..||+.|+. |+..|.+.|||+.|...
T Consensus 6 ~~yC~-C~~~~~g-~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 6 SGYCI-CNQVSYG-EMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp CCCST-TSCCCCS-SEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHH
T ss_pred CeEEE-cCCCCCC-CEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCcc
Confidence 35674 8876543 899999986 899999999 78889999999999765
No 37
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.28 E-value=2.9e-07 Score=71.35 Aligned_cols=49 Identities=29% Similarity=0.683 Sum_probs=41.7
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
..+| +|++..+...||.||.|+..||..|+......+| +.|+|+.|...
T Consensus 19 ~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~s 67 (68)
T 3o70_A 19 LVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRDS 67 (68)
T ss_dssp CCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHTC
T ss_pred ceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCCC
Confidence 4678 9999888778999999999999999997655555 68999999764
No 38
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.18 E-value=2e-07 Score=78.51 Aligned_cols=50 Identities=22% Similarity=0.634 Sum_probs=41.0
Q ss_pred cccccccccC-------CCCCeEEeccCCCCCCCcccCCCCC---CCCCCCccCccccCC
Q 016859 207 QSCKLCGKAD-------NTSTMLLCDYCDEAFHPSCCNPRIK---ILPTDNWLCQCCSNL 256 (381)
Q Consensus 207 ~~C~vC~~~~-------~~~~LLlCD~Cd~ayH~~CL~PPL~---~iP~G~W~Cp~C~~~ 256 (381)
.+|.+|..++ +.+.||+|+.|+++||++||.+++. .+|.+.|+|+.|...
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C 61 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSC 61 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCcc
Confidence 4688887654 3568999999999999999998743 578899999999644
No 39
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.16 E-value=5.8e-07 Score=68.00 Aligned_cols=53 Identities=25% Similarity=0.577 Sum_probs=41.9
Q ss_pred ccccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCC-CCCccCccccCCCC
Q 016859 206 IQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILP-TDNWLCQCCSNLNS 258 (381)
Q Consensus 206 ~~~C~vC~~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP-~G~W~Cp~C~~~~~ 258 (381)
..+|.+|++..+ ...|+.||.|+..||..|+........ .+.|+|+.|..+..
T Consensus 6 ~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 6 SGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 467999998764 568999999999999999995433332 36899999987654
No 40
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.06 E-value=3.4e-07 Score=76.76 Aligned_cols=51 Identities=24% Similarity=0.613 Sum_probs=40.6
Q ss_pred cccccccccc------CCCCCeEEeccCCCCCCCcccCC--CC-CCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKA------DNTSTMLLCDYCDEAFHPSCCNP--RI-KILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~------~~~~~LLlCD~Cd~ayH~~CL~P--PL-~~iP~G~W~Cp~C~~~ 256 (381)
..+|.+|... +..+.||.|+.|+++||++||.. ++ ..++.+.|+|+.|+..
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C 64 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTC 64 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCB
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCcc
Confidence 3578888765 35568999999999999999974 23 3578999999999754
No 41
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.00 E-value=1.5e-06 Score=67.52 Aligned_cols=51 Identities=29% Similarity=0.598 Sum_probs=40.0
Q ss_pred ccccccccccCCC-CCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNT-STMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~-~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
..+| +|++..+. ..|+.||.|...||..|+.........+.|+|+.|....
T Consensus 16 ~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 16 KVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp EECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred ceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 4679 69988654 479999999999999999965333334789999998654
No 42
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.92 E-value=1.5e-06 Score=72.49 Aligned_cols=50 Identities=22% Similarity=0.669 Sum_probs=40.9
Q ss_pred cccccccccC-CCCCeEEec-cCCCCCCCcccCCCCCC--------CCCCCccCccccCCCC
Q 016859 207 QSCKLCGKAD-NTSTMLLCD-YCDEAFHPSCCNPRIKI--------LPTDNWLCQCCSNLNS 258 (381)
Q Consensus 207 ~~C~vC~~~~-~~~~LLlCD-~Cd~ayH~~CL~PPL~~--------iP~G~W~Cp~C~~~~~ 258 (381)
..|.+|++.- +...|+.|| .|+..||..|+. |+. .|.+.|+|+.|.....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVg--lt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTG--MTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTT--CCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCC--cCHHHHHhhccCCCCCEECccccCcCC
Confidence 5799999983 345799998 999999999999 554 4778999999987643
No 43
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.92 E-value=9.7e-07 Score=67.97 Aligned_cols=48 Identities=23% Similarity=0.710 Sum_probs=39.6
Q ss_pred cccccccccccC-CCCCeEEec-cCCCCCCCcccCCCCCC--------CCCCCccCcccc
Q 016859 205 VIQSCKLCGKAD-NTSTMLLCD-YCDEAFHPSCCNPRIKI--------LPTDNWLCQCCS 254 (381)
Q Consensus 205 ~~~~C~vC~~~~-~~~~LLlCD-~Cd~ayH~~CL~PPL~~--------iP~G~W~Cp~C~ 254 (381)
....|.+|++.. +...|+.|| .|++.||..|+. |+. .|.+.|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg--lt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG--MTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT--CCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccC--CCHHHHHHhhccCCCcEECcCcc
Confidence 346799999975 456899999 999999999999 554 378899999996
No 44
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.87 E-value=8.5e-07 Score=69.41 Aligned_cols=49 Identities=31% Similarity=0.797 Sum_probs=40.2
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCC-------CCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKIL-------PTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~i-------P~G~W~Cp~C~~~~ 257 (381)
..+| +|++..+...|+.||.|+..||..|+. |+.. +...|+|+.|....
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvg--l~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVG--ISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHS--CCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEc--cchhhhhhccCCCCeEECcCCcCcc
Confidence 3678 899988777899999999999999998 4432 34789999998654
No 45
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.84 E-value=3.1e-06 Score=66.78 Aligned_cols=50 Identities=24% Similarity=0.646 Sum_probs=41.1
Q ss_pred ccccccccccCCCCCeEEec--cCCCCCCCcccCCCCCCCCC-------CCccCccccCCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIKILPT-------DNWLCQCCSNLNS 258 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD--~Cd~ayH~~CL~PPL~~iP~-------G~W~Cp~C~~~~~ 258 (381)
..+| +|+..++...|+.|| .|+..||..|+. |+..+. ..|+|+.|.....
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVg--i~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVI--LPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHS--CCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEEc--cccccccccccCCCCEECCCCCcccC
Confidence 4678 799987777999999 999999999999 555443 5899999987643
No 46
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.83 E-value=4.7e-06 Score=60.95 Aligned_cols=47 Identities=30% Similarity=0.707 Sum_probs=37.9
Q ss_pred cccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccC
Q 016859 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (381)
Q Consensus 207 ~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~ 255 (381)
.+| +|++..+...|+.||.|+..||..|+......+| +.|+|+.|..
T Consensus 5 ~~C-~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 5 VTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp BCS-TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred eEE-EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 345 5888877779999999999999999996544444 6899999964
No 47
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.83 E-value=4e-06 Score=66.16 Aligned_cols=52 Identities=27% Similarity=0.561 Sum_probs=40.0
Q ss_pred ccccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCC-CCCCccCccccCCCC
Q 016859 206 IQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKIL-PTDNWLCQCCSNLNS 258 (381)
Q Consensus 206 ~~~C~vC~~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~i-P~G~W~Cp~C~~~~~ 258 (381)
..+| +|++..+ ...|+.||.|+..||..|+.-..... ..+.|+|+.|....+
T Consensus 12 ~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 12 PVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred ccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccC
Confidence 3578 8998764 67899999999999999998332222 136899999997754
No 48
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.80 E-value=5.4e-06 Score=63.81 Aligned_cols=47 Identities=23% Similarity=0.564 Sum_probs=36.9
Q ss_pred cccccccccCCCCCeEEecc--CCCCCCCcccCCCCCCCCC------CCccCccccCC
Q 016859 207 QSCKLCGKADNTSTMLLCDY--CDEAFHPSCCNPRIKILPT------DNWLCQCCSNL 256 (381)
Q Consensus 207 ~~C~vC~~~~~~~~LLlCD~--Cd~ayH~~CL~PPL~~iP~------G~W~Cp~C~~~ 256 (381)
.+| +|+...+...|+.||. |...||..|+. |...|. ..|||+.|+..
T Consensus 11 v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvg--i~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 11 VRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVL--IPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp ECC-TTCCCSCCSCEEECSCTTTCEEEETTTSC--CCSSTTSCCCCCSSCCCHHHHHH
T ss_pred EEe-ECCCCcCCCCEEEECCCCCCCeEchhhCC--CCcccccccCCCCcEECcCccCc
Confidence 567 7988877789999995 99999999997 333222 36999999754
No 49
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.77 E-value=1.8e-06 Score=76.49 Aligned_cols=51 Identities=20% Similarity=0.555 Sum_probs=40.2
Q ss_pred ccccccccccCC-CCCeEEeccCCCCCCCcccCCCCCC-CCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKI-LPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~-iP~G~W~Cp~C~~~~ 257 (381)
..+| +|++.++ ...|+.||.|++.||..|+...... ...+.|+|+.|....
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 4689 9999764 5679999999999999999843222 236799999998653
No 50
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.65 E-value=6e-06 Score=60.46 Aligned_cols=45 Identities=24% Similarity=0.665 Sum_probs=35.8
Q ss_pred ccccccccCC-CCCeEEec-cCCCCCCCcccCCCCCCCC--CCCccCcccc
Q 016859 208 SCKLCGKADN-TSTMLLCD-YCDEAFHPSCCNPRIKILP--TDNWLCQCCS 254 (381)
Q Consensus 208 ~C~vC~~~~~-~~~LLlCD-~Cd~ayH~~CL~PPL~~iP--~G~W~Cp~C~ 254 (381)
.|-+|+++.+ ...|+.|| .|+..||..|+. |+..+ .+.|+|+.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvg--l~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVG--VSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTT--CCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccC--CCccccCCCCEECCCCC
Confidence 5778888764 56899999 899999999999 44332 4789999985
No 51
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.38 E-value=2.4e-05 Score=61.13 Aligned_cols=51 Identities=29% Similarity=0.655 Sum_probs=38.5
Q ss_pred cccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCCC-CCccCccccCCCC
Q 016859 207 QSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILPT-DNWLCQCCSNLNS 258 (381)
Q Consensus 207 ~~C~vC~~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP~-G~W~Cp~C~~~~~ 258 (381)
.+| +|++..+ ...||.||.|+..||..|+.-....++. +.|+|+.|....+
T Consensus 11 ~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~ 63 (75)
T 3kqi_A 11 VYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHG 63 (75)
T ss_dssp EET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHC
T ss_pred eEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCC
Confidence 456 7888754 5689999999999999999943333333 5799999987643
No 52
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.35 E-value=3.4e-05 Score=62.65 Aligned_cols=51 Identities=22% Similarity=0.630 Sum_probs=41.3
Q ss_pred cccccccccccCCCCCeEEeccCCCCCCCcccCCC------------CCCCCCCCccCccccCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPR------------IKILPTDNWLCQCCSNL 256 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PP------------L~~iP~G~W~Cp~C~~~ 256 (381)
.+..|.||..... +.++-|..|.+.||..||.++ +...+.+.|.|+.|..-
T Consensus 14 ~D~~C~VC~~~t~-~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 14 NDEMCDVCEVWTA-ESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CSCCCTTTCCCCS-SCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCcccCccccccc-cceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 3578999986553 358889999999999999886 55667889999999544
No 53
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.12 E-value=0.00011 Score=66.95 Aligned_cols=53 Identities=28% Similarity=0.619 Sum_probs=39.9
Q ss_pred cccccccccCCCC----CeEEeccCCCCCCCcccCCCC------CCCCC-CCccCccccCCCCc
Q 016859 207 QSCKLCGKADNTS----TMLLCDYCDEAFHPSCCNPRI------KILPT-DNWLCQCCSNLNSN 259 (381)
Q Consensus 207 ~~C~vC~~~~~~~----~LLlCD~Cd~ayH~~CL~PPL------~~iP~-G~W~Cp~C~~~~~~ 259 (381)
.+|.+|++.-+++ .|+.||.|++.||..|....- ..+|. ..|+|+.|....+.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 3688898875544 499999999999999998421 11343 37999999988654
No 54
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.74 E-value=0.00014 Score=75.07 Aligned_cols=51 Identities=27% Similarity=0.673 Sum_probs=40.0
Q ss_pred ccccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCCC---CCccCccccCCCCc
Q 016859 206 IQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILPT---DNWLCQCCSNLNSN 259 (381)
Q Consensus 206 ~~~C~vC~~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP~---G~W~Cp~C~~~~~~ 259 (381)
..+| +|++..+ ...|+.||.|+..||..|+. |...+. +.|+|+.|....+.
T Consensus 37 ~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvg--l~~~~~~~~~~~~C~~C~~~~~~ 91 (488)
T 3kv5_D 37 PVYC-VCRQPYDVNRFMIECDICKDWFHGSCVG--VEEHHAVDIDLYHCPNCAVLHGS 91 (488)
T ss_dssp CEET-TTTEECCTTSCEEEBTTTCCEEEHHHHT--CCGGGGGGEEEBCCHHHHHHHCS
T ss_pred CeEE-eCCCcCCCCCCeEEccCCCCceeeeecC--cCcccccCCCEEECCCCcCCcCc
Confidence 3567 8988754 67899999999999999998 554443 57999999876443
No 55
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.70 E-value=0.00049 Score=57.17 Aligned_cols=41 Identities=24% Similarity=0.577 Sum_probs=31.5
Q ss_pred CCCCeEEeccCCCCCCCcccCCCCCCCCCC----CccCccccCCC
Q 016859 217 NTSTMLLCDYCDEAFHPSCCNPRIKILPTD----NWLCQCCSNLN 257 (381)
Q Consensus 217 ~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G----~W~Cp~C~~~~ 257 (381)
.+..||.|+.|+.+||..|+.++...++.+ .|+|+.|....
T Consensus 71 ~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 71 FEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp GGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred cCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 345689999999999999999887665544 39999998653
No 56
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=96.33 E-value=0.0021 Score=53.86 Aligned_cols=48 Identities=17% Similarity=0.411 Sum_probs=43.1
Q ss_pred ccCCccccccccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccC
Q 016859 196 VSGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLC 250 (381)
Q Consensus 196 ~~~~~~~~~~~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~C 250 (381)
...|.|+.+ .|.+|++.. .+.|..|+.+||..|+.++|...+.+.|+|
T Consensus 51 ~g~W~Cp~c---~C~~C~k~~----~~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 51 YGKWECPWH---QCDECSSAA----VSFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp SSCCCCGGG---BCTTTCSBC----CEECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCEECCCC---CCCcCCCCC----CcCcCCCCcchhhhccCCcceecCCCCcee
Confidence 456999887 699999886 388999999999999999999999999998
No 57
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=96.23 E-value=0.0012 Score=68.82 Aligned_cols=40 Identities=20% Similarity=0.540 Sum_probs=31.5
Q ss_pred CCCCeEEeccCCCCCCCcccCCCCCCC---CCCCccCccccCCCC
Q 016859 217 NTSTMLLCDYCDEAFHPSCCNPRIKIL---PTDNWLCQCCSNLNS 258 (381)
Q Consensus 217 ~~~~LLlCD~Cd~ayH~~CL~PPL~~i---P~G~W~Cp~C~~~~~ 258 (381)
....|+.||.|+..||..|+. |+.- ..+.|+||.|....+
T Consensus 54 ~~~~mI~CD~C~~WfH~~CVg--i~~~~a~~~~~y~Cp~C~~~~g 96 (528)
T 3pur_A 54 NDFQWIGCDSCQTWYHFLCSG--LEQFEYYLYEKFFCPKCVPHTG 96 (528)
T ss_dssp STTSEEECTTTCCEEEGGGTT--CCGGGTTTEEECCCTTTHHHHC
T ss_pred cCCCEEECCCCCcCCCCcCCC--CChhHhcCCCeEECcCCcCCCC
Confidence 445899999999999999999 4432 236799999987543
No 58
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.98 E-value=0.0016 Score=66.56 Aligned_cols=48 Identities=33% Similarity=0.735 Sum_probs=37.0
Q ss_pred ccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCC--C-CCccCccccCCCC
Q 016859 208 SCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILP--T-DNWLCQCCSNLNS 258 (381)
Q Consensus 208 ~C~vC~~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP--~-G~W~Cp~C~~~~~ 258 (381)
+| +|++..+ ...|+.||.|+..||..|+. |+..+ . +.|+|+.|....+
T Consensus 7 yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVg--i~~~~~~~~~~y~C~~C~~~~~ 58 (447)
T 3kv4_A 7 YC-LCRLPYDVTRFMIECDMCQDWFHGSCVG--VEEEKAADIDLYHCPNCEVLHG 58 (447)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHT--CCHHHHTTEEECCCHHHHHHHC
T ss_pred EE-eCCCcCCCCCCeEEcCCCCcccccccCC--cCcccccCCCEEECCCCccccC
Confidence 44 7887654 57899999999999999998 44432 2 6799999986543
No 59
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=93.83 E-value=0.0029 Score=51.83 Aligned_cols=104 Identities=15% Similarity=0.219 Sum_probs=68.3
Q ss_pred CCCCCCCccccccCC---------CCCccchhhhhhhccccccccccccccccccccccCC-ccccccccccccccccCC
Q 016859 148 DISNSDISRLEVLDE---------DPSAREFCVSVLRSNGLLGAVGECSVRSVASGEVSGT-GHEISVIQSCKLCGKADN 217 (381)
Q Consensus 148 d~~eCp~~~~~~~~e---------e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t~~~~~~~-~~~~~~~~~C~vC~~~~~ 217 (381)
+..+|++|.-.+... ..+.|.||..++.+|-. ....||+-+......... .-.......|.+|...-.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGYS 83 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHT--TCSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBHH
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHH--hCCCCCCCCCcCccccccccccCCCCCCCCCCCCccc
Confidence 456899998775322 24789999999987742 336899888765432210 011123467999976421
Q ss_pred ----CCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 218 ----TSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 218 ----~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
.......-.|...||..|+.+-|... -.||.|+..-
T Consensus 84 ~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~~ 123 (133)
T 4ap4_A 84 EIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKKI 123 (133)
T ss_dssp HHHHTTCCEEEETTSBEEEHHHHHHHHHHC----SBCTTTCCBC
T ss_pred cccccCcceEeCCCCChhhHHHHHHHHHcC----CCCCCCCCcC
Confidence 12344566899999999998765432 4899998763
No 60
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=92.32 E-value=0.032 Score=43.40 Aligned_cols=20 Identities=45% Similarity=1.056 Sum_probs=16.1
Q ss_pred CCCccCeeeeeeeccCCCCCcccCCeeeccccC
Q 016859 349 PDSISNWLQCQEVLTNNDTNVCVEGTKCGKWRR 381 (381)
Q Consensus 349 ~~s~~NW~qC~~v~~~~~~~~~~~~~icgkwrr 381 (381)
.+...+|+||.. ..|+||||
T Consensus 12 ~~~~~~WVQCd~-------------p~C~KWR~ 31 (69)
T 2e61_A 12 FGQCLVWVQCSF-------------PNCGKWRR 31 (69)
T ss_dssp CCCCCCEEECSS-------------TTTCCEEE
T ss_pred CCCCCeEEEeCc-------------cccCcccC
Confidence 456899999974 36999997
No 61
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=91.01 E-value=0.043 Score=44.99 Aligned_cols=38 Identities=29% Similarity=0.716 Sum_probs=29.4
Q ss_pred CeEEeccCCCCCCCcccCCC------CCCCCCC-CccCccccCCC
Q 016859 220 TMLLCDYCDEAFHPSCCNPR------IKILPTD-NWLCQCCSNLN 257 (381)
Q Consensus 220 ~LLlCD~Cd~ayH~~CL~PP------L~~iP~G-~W~Cp~C~~~~ 257 (381)
.|+.||.|+.+||..|..-. |..+|.. .|.|+.|....
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 38899999999999998732 1355643 69999998653
No 62
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=90.57 E-value=0.032 Score=56.14 Aligned_cols=50 Identities=22% Similarity=0.677 Sum_probs=39.4
Q ss_pred cccccccccccCCCCCeEEec--cCCCCCCCcccCCCCC-----C-CCCCCccCccccCCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIK-----I-LPTDNWLCQCCSNLN 257 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD--~Cd~ayH~~CL~PPL~-----~-iP~G~W~Cp~C~~~~ 257 (381)
.+.+|.+|+.++ .+++|| .|.++|-..|+.--+. . .....|.|-.|....
T Consensus 92 ~~~yCr~C~~Gg---~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 92 YQSYCSICCSGE---TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SBCSCTTTCCCS---SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CcccceEcCCCC---eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 457999999988 699999 9999999999863331 1 234679999998774
No 63
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=89.20 E-value=0.083 Score=43.93 Aligned_cols=18 Identities=44% Similarity=1.139 Sum_probs=14.8
Q ss_pred CCCccCeeeeeeeccCCCCCcccCCeeeccccC
Q 016859 349 PDSISNWLQCQEVLTNNDTNVCVEGTKCGKWRR 381 (381)
Q Consensus 349 ~~s~~NW~qC~~v~~~~~~~~~~~~~icgkwrr 381 (381)
.....+|+||. .|+||||
T Consensus 22 ~~~~~~WVQCD---------------~C~KWRr 39 (100)
T 2l7p_A 22 YSTESAWVRCD---------------DCFKWRR 39 (100)
T ss_dssp CSSSSEEEECT---------------TTCCEEE
T ss_pred CCCCCeEEeeC---------------CCCcccc
Confidence 34689999996 3999997
No 64
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=85.25 E-value=0.14 Score=45.76 Aligned_cols=50 Identities=22% Similarity=0.653 Sum_probs=39.7
Q ss_pred cccccccccccCCCCCeEEec--cCCCCCCCcccCCCCC-----C-CCCCCccCccccCCC
Q 016859 205 VIQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIK-----I-LPTDNWLCQCCSNLN 257 (381)
Q Consensus 205 ~~~~C~vC~~~~~~~~LLlCD--~Cd~ayH~~CL~PPL~-----~-iP~G~W~Cp~C~~~~ 257 (381)
.+.+|.+|+.++ .+++|| .|.+.|=..|+.--+. + +....|.|-.|....
T Consensus 78 ~~~yC~wC~~Gg---~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 78 YQSYCTICCGGR---EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp SBSSCTTTSCCS---EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CcceeeEecCCC---eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 457999999988 699999 8999999999853222 2 456789999998764
No 65
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=83.01 E-value=0.17 Score=41.59 Aligned_cols=36 Identities=19% Similarity=0.411 Sum_probs=29.5
Q ss_pred cccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 207 ~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
.+|++|++.+ |+.|+..||++|+.++ .|.|..|...
T Consensus 8 ~~C~~C~~~~-------C~~C~~c~~~~~~~~~-------~~~~~~c~~~ 43 (117)
T 4bbq_A 8 RKCKACVQGE-------CGVCHYCRDMKKFGGP-------GRMKQSCVLR 43 (117)
T ss_dssp SCSHHHHSCC-------CSCSHHHHHSGGGTSC-------CCSCCCCGGG
T ss_pred CcCcCcCCcC-------CCCCCCCcCCcccCCC-------Cccccchhhe
Confidence 5788898764 9999999999999876 4888888654
No 66
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=80.56 E-value=1.4 Score=40.03 Aligned_cols=48 Identities=13% Similarity=0.245 Sum_probs=32.9
Q ss_pred cccc-CCCCCeEEeccCCCCCCCcccCCCCCCCCCC----CccCccccCCCCc
Q 016859 212 CGKA-DNTSTMLLCDYCDEAFHPSCCNPRIKILPTD----NWLCQCCSNLNSN 259 (381)
Q Consensus 212 C~~~-~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G----~W~Cp~C~~~~~~ 259 (381)
||+. +-...||.|+.|.+.||..|+..+...+-.+ ...|..|.....+
T Consensus 10 CG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g~E 62 (177)
T 3rsn_A 10 EENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNT 62 (177)
T ss_dssp -CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTSSC
T ss_pred cCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCCcc
Confidence 4543 3455899999999999999998655443223 3558888765433
No 67
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=70.61 E-value=2 Score=29.79 Aligned_cols=47 Identities=17% Similarity=0.390 Sum_probs=31.7
Q ss_pred ccccccccccCCC-CCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNT-STMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~-~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
...|.+|...-.. +.......|...||..|+..-+.. .-.||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 3568888765432 233444468999999999866543 3479999864
No 68
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=70.18 E-value=0.37 Score=35.79 Aligned_cols=48 Identities=27% Similarity=0.638 Sum_probs=32.4
Q ss_pred ccccccccccCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd---~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
...|.+|...+++..++-| .|. +.||..||..=|.. .+.+.|+.|...
T Consensus 6 ~~~CrIC~~~~~~~l~~PC-~C~gs~~~~H~~Cl~~W~~~--~~~~~C~~C~~~ 56 (60)
T 1vyx_A 6 VPVCWICNEELGNERFRAC-GCTGELENVHRSCLSTWLTI--SRNTACQICGVV 56 (60)
T ss_dssp CCEETTTTEECSCCCCCSC-CCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCB
T ss_pred CCEeEEeecCCCCceecCc-CCCCchhhhHHHHHHHHHHh--CCCCccCCCCCe
Confidence 4679999876555444454 344 48999999865432 246789998764
No 69
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.69 E-value=5 Score=29.21 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=24.5
Q ss_pred cCCCCCCCCCccccccCC--CCCccchhhhhhhccc
Q 016859 145 EGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNG 178 (381)
Q Consensus 145 ~~~d~~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~~ 178 (381)
...+..+|++|...+... ..+.|.||..|+..+-
T Consensus 16 ~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~ 51 (73)
T 2ysl_A 16 KLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIG 51 (73)
T ss_dssp CCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHC
T ss_pred hCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHH
Confidence 344557899999775221 2588999999998764
No 70
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.79 E-value=3.2 Score=30.54 Aligned_cols=46 Identities=11% Similarity=0.034 Sum_probs=31.4
Q ss_pred CCCCCCCCCccccccCCC-----CCccchhhhhhhcccccccccccccccccc
Q 016859 146 GSDISNSDISRLEVLDED-----PSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (381)
Q Consensus 146 ~~d~~eCp~~~~~~~~ee-----~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t~ 193 (381)
..+..+|++|...+.... .+.|.||..|+..|-... ..||+-+...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~--~~CP~Cr~~~ 62 (74)
T 2ep4_A 12 LNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR--KVCPLCNMPV 62 (74)
T ss_dssp CCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC--SBCTTTCCBC
T ss_pred CCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC--CcCCCcCccc
Confidence 344578999998763322 478899999998775333 5677766543
No 71
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.97 E-value=2.7 Score=31.17 Aligned_cols=44 Identities=11% Similarity=0.097 Sum_probs=29.3
Q ss_pred CCCCCCCCccccccCC-----CCCccchhhhhhhccccccccccccccccc
Q 016859 147 SDISNSDISRLEVLDE-----DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 147 ~d~~eCp~~~~~~~~e-----e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
.+..+|++|...+... ..+.|.||..|+..|-.. ...||+-+..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~--~~~CP~Cr~~ 69 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA--NRTCPICRAD 69 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH--CSSCTTTCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc--CCcCcCcCCc
Confidence 3446899999765333 237889999999877432 2567766543
No 72
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=67.62 E-value=4.4 Score=30.05 Aligned_cols=45 Identities=11% Similarity=-0.021 Sum_probs=30.2
Q ss_pred CCCCCCCCccccccCC-----CCCccchhhhhhhcccccccccccccccccc
Q 016859 147 SDISNSDISRLEVLDE-----DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (381)
Q Consensus 147 ~d~~eCp~~~~~~~~e-----e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t~ 193 (381)
.+..+|++|...+... ..+.|.||..||..|-.. ...||+-+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~--~~~CP~Cr~~~ 62 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ--HDSCPVCRKSL 62 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT--TCSCTTTCCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc--CCcCcCcCCcc
Confidence 3447899998765332 248899999999877432 25677665543
No 73
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.90 E-value=2.6 Score=32.85 Aligned_cols=50 Identities=22% Similarity=0.487 Sum_probs=31.0
Q ss_pred ccccccccccCC-CCCeEE-e--ccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADN-TSTMLL-C--DYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~-~~~LLl-C--D~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
...|.||....+ .+.+++ | .+.-..||..||..=|.. .+...||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~--~~~~~CplCr~~~ 68 (80)
T 2d8s_A 15 QDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS--SDTRCCELCKYEF 68 (80)
T ss_dssp SCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHH--HCCSBCSSSCCBC
T ss_pred CCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhh--CCCCCCCCCCCee
Confidence 467999986543 233432 2 222389999999854432 1235899998763
No 74
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=65.06 E-value=0.96 Score=33.00 Aligned_cols=48 Identities=19% Similarity=0.324 Sum_probs=31.6
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
...|.+|...-.....+..-.|...||..|+..-+.. .-.||.|+..-
T Consensus 14 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 61 (69)
T 2kiz_A 14 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVDI 61 (69)
T ss_dssp CCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSBS
T ss_pred CCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCccc
Confidence 4679999765433233444468889999999754432 23599998764
No 75
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=64.65 E-value=2.8 Score=33.50 Aligned_cols=48 Identities=13% Similarity=0.065 Sum_probs=31.3
Q ss_pred CCCCCccccccCC--------------------CCCccchhhhhhhccccc---ccccccccccccccccc
Q 016859 150 SNSDISRLEVLDE--------------------DPSAREFCVSVLRSNGLL---GAVGECSVRSVASGEVS 197 (381)
Q Consensus 150 ~eCp~~~~~~~~e--------------------e~s~~~~Cl~~l~~~~l~---~~~~~Cp~~~~t~~~~~ 197 (381)
.+|+||.-.+... ..+.|.||..||..|-.. .....||+-+..+....
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~ 96 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKT 96 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCS
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCC
Confidence 5799998775321 237889999999877421 12357777776655443
No 76
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.70 E-value=2.6 Score=30.21 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=29.7
Q ss_pred CCCCCCCCCccccccCC---------CCCccchhhhhhhcccccccccccccccc
Q 016859 146 GSDISNSDISRLEVLDE---------DPSAREFCVSVLRSNGLLGAVGECSVRSV 191 (381)
Q Consensus 146 ~~d~~eCp~~~~~~~~e---------e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~ 191 (381)
..+..+|++|...+... ..+.|.||..|+..|-.. ...||+-+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--~~~CP~Cr~ 64 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--ANTCPTCRK 64 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH--CSSCTTTCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc--CCCCCCCCC
Confidence 34557899999875322 358899999999876422 356766554
No 77
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=62.79 E-value=3.5 Score=30.63 Aligned_cols=48 Identities=21% Similarity=0.408 Sum_probs=31.8
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
...|.+|...-.....+.--.|...||..|+..-+.. .-.||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 62 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSL 62 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCCC
T ss_pred CCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCcc
Confidence 4679999765433333323358888999999765432 24799998764
No 78
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.69 E-value=6.3 Score=28.03 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=24.4
Q ss_pred cCCCCCCCCCccccccCC--CCCccchhhhhhhccc
Q 016859 145 EGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNG 178 (381)
Q Consensus 145 ~~~d~~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~~ 178 (381)
...+..+||+|...+... ..+.|.||..+|..|-
T Consensus 16 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~ 51 (63)
T 2ysj_A 16 KLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIG 51 (63)
T ss_dssp CCCCCCBCTTTCSBCSSCEECTTSSEECHHHHHHHH
T ss_pred hCccCCCCCcCCchhCCeEEeCCCCcchHHHHHHHH
Confidence 344557899999775321 2588999999998764
No 79
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=59.80 E-value=8.9 Score=26.29 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=27.4
Q ss_pred CCCCCCCCccccccCCC------CCccchhhhhhhccccccccccccccc
Q 016859 147 SDISNSDISRLEVLDED------PSAREFCVSVLRSNGLLGAVGECSVRS 190 (381)
Q Consensus 147 ~d~~eCp~~~~~~~~ee------~s~~~~Cl~~l~~~~l~~~~~~Cp~~~ 190 (381)
++..+|++|...+..++ .+.|.||..++.+|-.. ...||+-+
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~--~~~CP~Cr 50 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS--HSTCPLCR 50 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT--CCSCSSSC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc--CCcCcCCC
Confidence 34578999987753321 27788999999877432 25566544
No 80
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.69 E-value=1.7 Score=32.34 Aligned_cols=48 Identities=23% Similarity=0.493 Sum_probs=32.8
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
...|.+|...-.....+..-.|...||..|+..-|.. ...||.|+..-
T Consensus 23 ~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~~ 70 (75)
T 1x4j_A 23 QTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRADS 70 (75)
T ss_dssp CCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCCC
T ss_pred CCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCcC
Confidence 4679999875443334444468889999999864432 24799998653
No 81
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=58.17 E-value=8.7 Score=28.25 Aligned_cols=33 Identities=6% Similarity=0.073 Sum_probs=23.8
Q ss_pred CCCCCCCCCccccccCC--CCCccchhhhhhhccc
Q 016859 146 GSDISNSDISRLEVLDE--DPSAREFCVSVLRSNG 178 (381)
Q Consensus 146 ~~d~~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~~ 178 (381)
..+..+||+|...+... ..+.|.||..|+..+-
T Consensus 9 ~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~ 43 (79)
T 2egp_A 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSN 43 (79)
T ss_dssp CCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCC
T ss_pred cccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHH
Confidence 34557899998775322 2488999999998764
No 82
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.10 E-value=2.3 Score=32.55 Aligned_cols=45 Identities=20% Similarity=0.532 Sum_probs=27.9
Q ss_pred ccccccccCC-CCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 208 SCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 208 ~C~vC~~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
.|.+|..... .+..+.--.|.-.||..|+..=|..- -.||.|+..
T Consensus 28 ~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~ 73 (81)
T 2ecl_A 28 ACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN----NRCPLCQQD 73 (81)
T ss_dssp CCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC----CBCTTTCCB
T ss_pred cCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC----CCCCCcCCC
Confidence 3555544321 22233334699999999998765543 279999876
No 83
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.45 E-value=7.3 Score=28.60 Aligned_cols=44 Identities=14% Similarity=0.239 Sum_probs=29.9
Q ss_pred CCCCCCCCccccccCC---CCCccchhhhhhhccccccccccccccccc
Q 016859 147 SDISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 147 ~d~~eCp~~~~~~~~e---e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
++...|++|...+... ..+.|.||..|+..|-.. ...||+-+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~CP~Cr~~ 59 (72)
T 2djb_A 13 TPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY--SNRCPKCNIV 59 (72)
T ss_dssp CGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH--CSSCTTTCCC
T ss_pred CCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc--CCcCCCcCcc
Confidence 3446899998876433 258899999999876422 2567666544
No 84
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.14 E-value=13 Score=27.40 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=23.9
Q ss_pred cCCCCCCCCCccccccCC--CCCccchhhhhhhcc
Q 016859 145 EGSDISNSDISRLEVLDE--DPSAREFCVSVLRSN 177 (381)
Q Consensus 145 ~~~d~~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~ 177 (381)
...+..+|++|.-.+... ..+.|.||..|+..+
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~ 49 (85)
T 2ecv_A 15 NVKEEVTCPICLELLTQPLSLDCGHSFCQACLTAN 49 (85)
T ss_dssp CCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHH
T ss_pred HccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHH
Confidence 345567899999875321 258899999999765
No 85
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=54.03 E-value=9.6 Score=27.46 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=28.5
Q ss_pred CCCCCCCccccccCC-----CCCccchhhhhhhccccccccccccccccc
Q 016859 148 DISNSDISRLEVLDE-----DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 148 d~~eCp~~~~~~~~e-----e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
+..+|++|...+... ..+.|.||..|+..|-... ..||+-+..
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~--~~CP~Cr~~ 60 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITN--KKCPICRVD 60 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHC--SBCTTTCSB
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcC--CCCcCcCcc
Confidence 447899997665222 2478899999998774332 567766544
No 86
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.98 E-value=7.7 Score=28.37 Aligned_cols=44 Identities=16% Similarity=0.352 Sum_probs=29.9
Q ss_pred CCCCCCCccccccCC--CCCccchhhhhhhcccccccccccccccccc
Q 016859 148 DISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (381)
Q Consensus 148 d~~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t~ 193 (381)
+..+|++|...+... ..+.|.||..|+..|-... ..||+-+...
T Consensus 14 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~--~~CP~Cr~~~ 59 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLG--KRCALCRQEI 59 (71)
T ss_dssp SCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCS--SBCSSSCCBC
T ss_pred CCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCC--CcCcCcCchh
Confidence 446899998775221 2488999999998775433 6677665543
No 87
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=53.96 E-value=2 Score=29.70 Aligned_cols=47 Identities=19% Similarity=0.436 Sum_probs=31.5
Q ss_pred ccccccccccC-CCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKAD-NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~-~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
...|.+|...- +.+.....-.|...||..|+..-+..- ..||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 52 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG----YRCPLCSGP 52 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT----CCCTTSCCS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC----CcCCCCCCc
Confidence 45789998653 223345556788899999997543322 479999765
No 88
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=53.37 E-value=1.8 Score=33.73 Aligned_cols=47 Identities=17% Similarity=0.403 Sum_probs=31.3
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
+..|.+|...-.....+..-.|...||..|+..-|.. .-.||.|+..
T Consensus 40 ~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~----~~~CP~Cr~~ 86 (91)
T 2l0b_A 40 EMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK----SGTCPVCRCM 86 (91)
T ss_dssp CSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT----TCBCTTTCCB
T ss_pred CCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc----CCcCcCcCcc
Confidence 4679999865433333333348889999999865543 2379999865
No 89
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.79 E-value=14 Score=25.33 Aligned_cols=32 Identities=6% Similarity=0.051 Sum_probs=23.4
Q ss_pred CCCCCCCCCccccccCC--CCCccchhhhhhhcc
Q 016859 146 GSDISNSDISRLEVLDE--DPSAREFCVSVLRSN 177 (381)
Q Consensus 146 ~~d~~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~ 177 (381)
..+...|++|...+... ..+.|.||..++..|
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~ 45 (58)
T 2ecj_A 12 LQVEASCSVCLEYLKEPVIIECGHNFCKACITRW 45 (58)
T ss_dssp SCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHH
T ss_pred cccCCCCccCCcccCccEeCCCCCccCHHHHHHH
Confidence 34457899998775332 247899999999877
No 90
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=50.31 E-value=13 Score=29.79 Aligned_cols=34 Identities=24% Similarity=0.762 Sum_probs=27.0
Q ss_pred CCeEEeccCC-CCCCCcccCCCCCCCCCCCccCccccC
Q 016859 219 STMLLCDYCD-EAFHPSCCNPRIKILPTDNWLCQCCSN 255 (381)
Q Consensus 219 ~~LLlCD~Cd-~ayH~~CL~PPL~~iP~G~W~Cp~C~~ 255 (381)
-.||+|..|. .+-|..|.. |.. ....|.|..|..
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~--l~~-~~~~weC~~C~~ 78 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSS--LRP-NSKKWECNECLP 78 (85)
T ss_dssp TBCEECSSSCCCEECSGGGT--CCT-TCSCCCCTTTSC
T ss_pred EEEEeCcccCCchhHHHHhC--CcC-CCCCEECCcCcc
Confidence 3799999997 667999999 432 456899999984
No 91
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.06 E-value=5.8 Score=30.71 Aligned_cols=47 Identities=17% Similarity=0.457 Sum_probs=33.8
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
...|.+|...-. .-+.|..|...||..|+.-=|.... .=.||.|+..
T Consensus 15 i~~C~IC~~~i~--~g~~C~~C~h~fH~~Ci~kWl~~~~--~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQSNA--EPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCS--SSEECSSSCCEECHHHHHHHSTTCS--SCCCTTTCSC
T ss_pred CCcCcchhhHcc--cCCccCCCCchhhHHHHHHHHHhcC--CCCCCCCcCc
Confidence 367999987554 2356889999999999986554432 2369999855
No 92
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=48.92 E-value=14 Score=27.19 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=23.9
Q ss_pred CCCCCCCCCccccccCC--CCCccchhhhhhhccc
Q 016859 146 GSDISNSDISRLEVLDE--DPSAREFCVSVLRSNG 178 (381)
Q Consensus 146 ~~d~~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~~ 178 (381)
..+..+|++|...+... ..+.|.||..|+..+-
T Consensus 16 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~ 50 (85)
T 2ecw_A 16 IKEEVTCPICLELLKEPVSADCNHSFCRACITLNY 50 (85)
T ss_dssp CCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHH
T ss_pred CccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHH
Confidence 44557899998775322 2488999999997653
No 93
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=48.12 E-value=2.5 Score=33.84 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=23.6
Q ss_pred eccCCCCCCCcccCCCCCCC-CCCCccCccccCCCC
Q 016859 224 CDYCDEAFHPSCCNPRIKIL-PTDNWLCQCCSNLNS 258 (381)
Q Consensus 224 CD~Cd~ayH~~CL~PPL~~i-P~G~W~Cp~C~~~~~ 258 (381)
--.|.-.||..|+..-|..- ....-.||.|+..-.
T Consensus 58 ~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp ESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred cCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 45688899999998654211 123457999987643
No 94
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=47.70 E-value=12 Score=27.41 Aligned_cols=49 Identities=16% Similarity=0.285 Sum_probs=33.4
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCC---CCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKIL---PTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~i---P~G~W~Cp~C~~~~ 257 (381)
+..|.+|...-....++ .|...||..|+.--+..- ..+.-.||.|+..-
T Consensus 12 ~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 12 EVTCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCEETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred CCCCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 45799998765433333 688889999998665542 12356899998774
No 95
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.26 E-value=1.6 Score=32.23 Aligned_cols=50 Identities=20% Similarity=0.361 Sum_probs=32.1
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCCCc
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNSN 259 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~~~ 259 (381)
+..|.+|...-.....+.--.|...||..|+..-+..- -.||.|+..-..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~----~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR----KVCPLCNMPVLQ 64 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC----SBCTTTCCBCSS
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC----CcCCCcCccccc
Confidence 46799998764333333222588889999997544321 279999876433
No 96
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=46.16 E-value=17 Score=27.77 Aligned_cols=46 Identities=11% Similarity=0.102 Sum_probs=28.2
Q ss_pred CCCCCCCCCccccccCCC------CCccchhhhhhhccccccccccccccccc
Q 016859 146 GSDISNSDISRLEVLDED------PSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 146 ~~d~~eCp~~~~~~~~ee------~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
..+...||+|.-.+...+ .+.|.||..|+...-. .....||+-+..
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~-~~~~~CP~CR~~ 59 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRT-DENGLCPACRKP 59 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTT-SSCSBCTTTCCB
T ss_pred cccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHh-cCCCCCCCCCCc
Confidence 345578999998764332 2889999999864311 112455555443
No 97
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=45.81 E-value=12 Score=26.86 Aligned_cols=44 Identities=14% Similarity=0.119 Sum_probs=29.5
Q ss_pred CCCCCCCccccccCC---CCCccchhhhhhhcccccccccccccccccc
Q 016859 148 DISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (381)
Q Consensus 148 d~~eCp~~~~~~~~e---e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t~ 193 (381)
+..+|++|...+... ..+.|.||..|+..|-. ....||+-+...
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~--~~~~CP~Cr~~~ 50 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWIR--QNPTCPLCKVPV 50 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHH--HSCSTTTTCCCC
T ss_pred CCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHh--CcCcCcCCChhh
Confidence 346899998875332 34788999999987642 225677666543
No 98
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=44.41 E-value=12 Score=27.57 Aligned_cols=44 Identities=18% Similarity=0.207 Sum_probs=28.3
Q ss_pred CCCCCCCccccccCC--CC-Cccchhhhhhhcccccccccccccccc
Q 016859 148 DISNSDISRLEVLDE--DP-SAREFCVSVLRSNGLLGAVGECSVRSV 191 (381)
Q Consensus 148 d~~eCp~~~~~~~~e--e~-s~~~~Cl~~l~~~~l~~~~~~Cp~~~~ 191 (381)
+...||+|...+... .. +.|.||..||..|-...+...||+.+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~ 60 (74)
T 2yur_A 14 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQ 60 (74)
T ss_dssp GGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCC
T ss_pred CCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCC
Confidence 446899998876332 23 689999999987643222235665544
No 99
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.24 E-value=4.3 Score=29.30 Aligned_cols=46 Identities=17% Similarity=0.377 Sum_probs=31.8
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
...|.+|...-....++ .|...||..|+..-+. .+.-.||.|+..-
T Consensus 15 ~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 15 KYKCEKCHLVLCSPKQT---ECGHRFCESCMAALLS---SSSPKCTACQESI 60 (66)
T ss_dssp CEECTTTCCEESSCCCC---SSSCCCCHHHHHHHHT---TSSCCCTTTCCCC
T ss_pred CCCCCCCChHhcCeeEC---CCCCHHHHHHHHHHHH---hCcCCCCCCCcCC
Confidence 45799998755433333 7888899999886553 3445799998763
No 100
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=43.95 E-value=6.7 Score=28.26 Aligned_cols=45 Identities=16% Similarity=0.182 Sum_probs=29.8
Q ss_pred CCCCCCCCCccccccC---------CCCCccchhhhhhhccccccccccccccccc
Q 016859 146 GSDISNSDISRLEVLD---------EDPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 146 ~~d~~eCp~~~~~~~~---------ee~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
..+..+|++|...+.. ...+.|.||..|+.+|-. ....||+-+..
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~ 60 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKK 60 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCCB
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH--cCCCCCCCCCc
Confidence 3455789999977532 235789999999987642 22567665543
No 101
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=43.88 E-value=6 Score=39.66 Aligned_cols=51 Identities=22% Similarity=0.404 Sum_probs=32.5
Q ss_pred ccccccccccCCC---CCeEEec--cCCCCCCCcccCCCCCCCCCC-------CccCccccCC
Q 016859 206 IQSCKLCGKADNT---STMLLCD--YCDEAFHPSCCNPRIKILPTD-------NWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~---~~LLlCD--~Cd~ayH~~CL~PPL~~iP~G-------~W~Cp~C~~~ 256 (381)
...|.+|-.--.+ -....|+ .|...||..||..=|.+.+.+ .=-||.|+.+
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 4569999764332 2334698 899999999998533222221 0138888875
No 102
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=43.46 E-value=8.1 Score=30.91 Aligned_cols=46 Identities=15% Similarity=0.431 Sum_probs=32.5
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
+..|.+|...-... ..+ .|...||..|+..-+. .+.-.||.|+..-
T Consensus 15 ~~~C~iC~~~~~~p-~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 15 ECQCGICMEILVEP-VTL--PCNHTLCKPCFQSTVE---KASLCCPFCRRRV 60 (115)
T ss_dssp HHBCTTTCSBCSSC-EEC--TTSCEECHHHHCCCCC---TTTSBCTTTCCBC
T ss_pred CCCCccCCcccCce-eEc--CCCCHHhHHHHHHHHh---HCcCCCCCCCccc
Confidence 46799998654332 333 6888899999986543 3457899998774
No 103
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=42.97 E-value=11 Score=29.13 Aligned_cols=42 Identities=17% Similarity=0.081 Sum_probs=27.8
Q ss_pred CCCCCCCccccccCC-----CCCccchhhhhhhcccccccccccccccc
Q 016859 148 DISNSDISRLEVLDE-----DPSAREFCVSVLRSNGLLGAVGECSVRSV 191 (381)
Q Consensus 148 d~~eCp~~~~~~~~e-----e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~ 191 (381)
+..+|++|...+... ..+.|.||..||..|-.. ...||+-+.
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~--~~~CP~Cr~ 85 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK--SGTCPVCRC 85 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT--TCBCTTTCC
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc--CCcCcCcCc
Confidence 346799998664321 247899999999887432 256766554
No 104
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.75 E-value=17 Score=27.08 Aligned_cols=33 Identities=12% Similarity=0.133 Sum_probs=23.7
Q ss_pred CCCCCCCCCccccccCCC------CCccchhhhhhhccc
Q 016859 146 GSDISNSDISRLEVLDED------PSAREFCVSVLRSNG 178 (381)
Q Consensus 146 ~~d~~eCp~~~~~~~~ee------~s~~~~Cl~~l~~~~ 178 (381)
..+..+|++|...+...+ .+.|.||..|+..+-
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~ 50 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLL 50 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHH
T ss_pred ccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHH
Confidence 344578999998764422 478999999998763
No 105
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=41.15 E-value=14 Score=26.36 Aligned_cols=43 Identities=9% Similarity=0.148 Sum_probs=27.9
Q ss_pred CCCCCCccc-cccCC------CCCccchhhhhhhccccccccccccccccc
Q 016859 149 ISNSDISRL-EVLDE------DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 149 ~~eCp~~~~-~~~~e------e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
...||+|.. .+... ..+.|.||..++.++-. .+...||+-+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~ 52 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV-RGAGNCPECGTP 52 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH-TTSSSCTTTCCC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH-cCCCcCCCCCCc
Confidence 457999998 55444 25889999999987621 222456655443
No 106
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.70 E-value=16 Score=27.28 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=28.8
Q ss_pred CCCCCCCccccccCC--CCCccchhhhhhhccccccccccccccccc
Q 016859 148 DISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 148 d~~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
+..+|++|...+... ..+.|.||..|+..|-. ....||+.+..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~ 58 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVVTKCRHYFCESCALEHFR--ATPRCYICDQP 58 (81)
T ss_dssp CCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHH--HCSBCSSSCCB
T ss_pred CCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHH--CCCcCCCcCcc
Confidence 346799998775322 34889999999987642 23567666544
No 107
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=39.38 E-value=11 Score=24.86 Aligned_cols=14 Identities=36% Similarity=1.134 Sum_probs=10.5
Q ss_pred CCCCCccCccccCC
Q 016859 243 LPTDNWLCQCCSNL 256 (381)
Q Consensus 243 iP~G~W~Cp~C~~~ 256 (381)
+..|+|.|+.|-.-
T Consensus 2 ~~~gDW~C~~C~~~ 15 (33)
T 2k1p_A 2 SSANDWQCKTCSNV 15 (33)
T ss_dssp CSSSSCBCSSSCCB
T ss_pred CCCCCcccCCCCCc
Confidence 34689999988543
No 108
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.04 E-value=21 Score=25.62 Aligned_cols=45 Identities=18% Similarity=0.183 Sum_probs=29.7
Q ss_pred CCCCCCCCCccccccC-CCCCccchhhhhhhccccccccccccccccc
Q 016859 146 GSDISNSDISRLEVLD-EDPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 146 ~~d~~eCp~~~~~~~~-ee~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
..+..+|++|...+.. ...+.|.||..|+..|-. ....||+-+..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~ 57 (70)
T 2ecn_A 12 LTDEEECCICMDGRADLILPCAHSFCQKCIDKWSD--RHRNCPICRLQ 57 (70)
T ss_dssp CCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSSC--CCSSCHHHHHC
T ss_pred CCCCCCCeeCCcCccCcccCCCCcccHHHHHHHHH--CcCcCCCcCCc
Confidence 3445789999887533 113778999999987643 33667665544
No 109
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=36.26 E-value=7.7 Score=32.46 Aligned_cols=28 Identities=25% Similarity=0.514 Sum_probs=0.0
Q ss_pred ccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 225 DYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 225 D~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
-.|.-.||..|+.+=|.. .-.||.|+..
T Consensus 82 ~~C~H~FH~~CI~~Wl~~----~~~CP~Cr~~ 109 (117)
T 4a0k_B 82 GVCNHAFHFHCISRWLKT----RQVCPLDNRE 109 (117)
T ss_dssp --------------------------------
T ss_pred CCcCceEcHHHHHHHHHc----CCcCCCCCCe
Confidence 468899999999976554 2369999875
No 110
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=36.01 E-value=28 Score=24.34 Aligned_cols=42 Identities=17% Similarity=0.478 Sum_probs=27.6
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
+..|.+|...-....+| .|...|+..|+.. ..-.||.|+..-
T Consensus 6 ~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~-------~~~~CP~Cr~~~ 47 (56)
T 1bor_A 6 FLRCQQCQAEAKCPKLL---PCLHTLCSGCLEA-------SGMQCPICQAPW 47 (56)
T ss_dssp CSSCSSSCSSCBCCSCS---TTSCCSBTTTCSS-------SSSSCSSCCSSS
T ss_pred CCCceEeCCccCCeEEc---CCCCcccHHHHcc-------CCCCCCcCCcEe
Confidence 45688998755444444 3666777778764 234799998763
No 111
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=35.26 E-value=11 Score=28.70 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=29.4
Q ss_pred CCCCCCCCccccccCC--CC-Cccchhhhhhhccccccccccccccccc
Q 016859 147 SDISNSDISRLEVLDE--DP-SAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 147 ~d~~eCp~~~~~~~~e--e~-s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
.+...||+|.-.+... -. +.|.||..||..+-...+...||+.+..
T Consensus 11 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 59 (92)
T ss_dssp CTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCS
T ss_pred CcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCc
Confidence 4456799999875322 13 6899999999876322222466666544
No 112
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=35.16 E-value=8 Score=39.95 Aligned_cols=19 Identities=42% Similarity=0.774 Sum_probs=0.0
Q ss_pred ccccccCCceeEeCCCCcc
Q 016859 297 TSRVRIGESYQAEVPDWSD 315 (381)
Q Consensus 297 ts~vRiGr~Fqa~VP~Ws~ 315 (381)
...+|||..|||+||+|..
T Consensus 99 ~~eIRVG~~YQAeIPe~~~ 117 (482)
T 2xag_B 99 GGGMRVGPQYQAVVPDFDP 117 (482)
T ss_dssp -------------------
T ss_pred CCCCCCCCccCccCCCccC
Confidence 3467999999999999984
No 113
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=34.94 E-value=8 Score=27.10 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=27.7
Q ss_pred CCCCCCccccccC---------CCCCccchhhhhhhccccccccccccccccc
Q 016859 149 ISNSDISRLEVLD---------EDPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 149 ~~eCp~~~~~~~~---------ee~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
..+|++|...+.. -..+.|.||..++.+|-.. ...||+-+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--~~~CP~Cr~~ 53 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN--ANTCPTCRKK 53 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH--CSBCTTTCCB
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc--CCCCCCCCcc
Confidence 3579999876532 1247889999999876422 3567665543
No 114
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=34.03 E-value=7.4 Score=31.78 Aligned_cols=31 Identities=23% Similarity=0.460 Sum_probs=23.3
Q ss_pred EEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 222 LLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 222 LlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
+.--.|...||..|+.+=|.. .-.||.|+..
T Consensus 68 ~~~~~C~H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 68 VAWGVCNHAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp EEEETTSCEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred EeecccCcEECHHHHHHHHHc----CCcCcCCCCc
Confidence 344579999999999876544 2469999876
No 115
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=32.19 E-value=14 Score=30.76 Aligned_cols=41 Identities=15% Similarity=0.119 Sum_probs=28.4
Q ss_pred CCCCCccccccCC--CCCccchhhhhhhccccccccccccccccc
Q 016859 150 SNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 150 ~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
..||+|.-.+... ..+.|.||..|+..|-. ....||+.+..
T Consensus 54 ~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~ 96 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLNCAHSFCSYCINEWMK--RKIECPICRKD 96 (138)
T ss_dssp SBCTTTCSBCSSEEEETTSCEEEHHHHHHHTT--TCSBCTTTCCB
T ss_pred CCCcccCcccCCceECCCCCCccHHHHHHHHH--cCCcCCCCCCc
Confidence 4699998765221 24889999999987643 33678777654
No 116
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=31.81 E-value=10 Score=24.85 Aligned_cols=12 Identities=33% Similarity=0.996 Sum_probs=9.3
Q ss_pred CCCccCccccCC
Q 016859 245 TDNWLCQCCSNL 256 (381)
Q Consensus 245 ~G~W~Cp~C~~~ 256 (381)
.|+|.|+.|...
T Consensus 3 ~gDW~C~~C~~~ 14 (32)
T 2lk0_A 3 FEDWLCNKCCLN 14 (32)
T ss_dssp CSEEECTTTCCE
T ss_pred CCCCCcCcCcCC
Confidence 489999998543
No 117
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=30.61 E-value=12 Score=29.68 Aligned_cols=30 Identities=30% Similarity=0.799 Sum_probs=22.0
Q ss_pred cccccccccCCCCCeEEecc--CCCCCCCcccC
Q 016859 207 QSCKLCGKADNTSTMLLCDY--CDEAFHPSCCN 237 (381)
Q Consensus 207 ~~C~vC~~~~~~~~LLlCD~--Cd~ayH~~CL~ 237 (381)
..|.+|++.+ ...-+-|.. |..+||..|-.
T Consensus 18 l~C~iC~~~~-~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 18 LTCYLCKQKG-VGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCBTTTTBCC-SSCEEECSCTTTCCEEEHHHHH
T ss_pred CCCcCCCCCC-CcEeEecCCCCCCCcCcHHHHH
Confidence 4699997532 115788875 99999999964
No 118
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=29.95 E-value=26 Score=28.44 Aligned_cols=27 Identities=7% Similarity=0.035 Sum_probs=18.9
Q ss_pred CCccchhhhhhhccccccccccccccccc
Q 016859 164 PSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 164 ~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
.+.|.|+..||..|-.. ..+||+-+..
T Consensus 72 ~C~H~FH~~Ci~~Wl~~--~~~CP~Cr~~ 98 (106)
T 3dpl_R 72 VCNHAFHFHCISRWLKT--RQVCPLDNRE 98 (106)
T ss_dssp TTSCEEEHHHHHHHHTT--CSBCSSSCSB
T ss_pred ccCcEECHHHHHHHHHc--CCcCcCCCCc
Confidence 47788999999887433 3678776654
No 119
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=29.53 E-value=14 Score=34.41 Aligned_cols=47 Identities=17% Similarity=0.477 Sum_probs=33.8
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~ 256 (381)
...|.+|..--- .-..|..|...||..|+.--+.. .+.=.||.|...
T Consensus 180 i~~C~iC~~iv~--~g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~~~ 226 (238)
T 3nw0_A 180 VKICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCNDY 226 (238)
T ss_dssp CCBCTTTCSBCS--SCEECSSSCCEECHHHHHHHTTT--CSSCBCTTTCCB
T ss_pred CCcCcchhhHHh--CCcccCccChHHHHHHHHHHHHh--CCCCCCCCCCCC
Confidence 467999987554 34779899999999999743332 234579988654
No 120
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=28.71 E-value=23 Score=27.40 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=30.0
Q ss_pred CCCCCCCccccccCC---CCCccchhhhhhhcccccccccccccccccc
Q 016859 148 DISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (381)
Q Consensus 148 d~~eCp~~~~~~~~e---e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t~ 193 (381)
+...|++|...+... ..+.|.||..|+..+-.. ...||+.+...
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~CP~Cr~~~ 67 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY--KTQCPTCCVTV 67 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT--CCBCTTTCCBC
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHC--CCCCCCCCCcC
Confidence 346899999876433 258899999999876432 25677666543
No 121
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=28.56 E-value=12 Score=29.48 Aligned_cols=48 Identities=21% Similarity=0.357 Sum_probs=31.5
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
...|.+|...-....++ .|...||..|+..-+..- .+...||.|+..-
T Consensus 21 ~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 21 ILECPICLELIKEPVST---KCDHIFCKFCMLKLLNQK-KGPSQCPLCKNDI 68 (112)
T ss_dssp HTSCSSSCCCCSSCCBC---TTSCCCCSHHHHHHHHSS-SSSCCCTTTSCCC
T ss_pred CCCCcccChhhcCeEEC---CCCCHHHHHHHHHHHHhC-CCCCCCcCCCCcC
Confidence 35689998754333332 688889999987544322 3446899998763
No 122
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=26.62 E-value=37 Score=26.93 Aligned_cols=20 Identities=25% Similarity=0.723 Sum_probs=14.3
Q ss_pred CCCCCCCCccCccccCCCCcc
Q 016859 240 IKILPTDNWLCQCCSNLNSNV 260 (381)
Q Consensus 240 L~~iP~G~W~Cp~C~~~~~~v 260 (381)
...+|. +|.||.|...+...
T Consensus 54 fedlPd-dW~CPvCga~K~~F 73 (81)
T 2kn9_A 54 WDDIPD-DWSCPDCGAAKSDF 73 (81)
T ss_dssp TTTSCT-TCCCTTTCCCGGGE
T ss_pred hhHCCC-CCcCCCCCCCHHHc
Confidence 345554 79999999876544
No 123
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=26.28 E-value=15 Score=28.84 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=30.2
Q ss_pred CCCCCCCccccccCC---CCCccchhhhhhhcccccccccccccccccc
Q 016859 148 DISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (381)
Q Consensus 148 d~~eCp~~~~~~~~e---e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t~ 193 (381)
+...|++|.-.+... ..+.|.||..||..|-.... ..||+.+...
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~-~~CP~Cr~~~ 68 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQR-AQCPHCRAPL 68 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTC-SBCTTTCCBC
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCc-CCCCCCCCcC
Confidence 446899999876332 34789999999987642221 4677666543
No 124
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=25.47 E-value=24 Score=29.95 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=27.2
Q ss_pred CCCCCccccccCC---CCCccchhhhhhhcccccccccccccccc
Q 016859 150 SNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSV 191 (381)
Q Consensus 150 ~eCp~~~~~~~~e---e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~ 191 (381)
..||+|.-.+... ..+.|.||..|+..|-.. +...||+.+.
T Consensus 55 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-~~~~CP~Cr~ 98 (165)
T 2ckl_B 55 LMCPICLDMLKNTMTTKECLHRFCADCIITALRS-GNKECPTCRK 98 (165)
T ss_dssp HBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHT-TCCBCTTTCC
T ss_pred CCCcccChHhhCcCEeCCCCChhHHHHHHHHHHh-CcCCCCCCCC
Confidence 5799998876433 258899999999876421 1244555443
No 125
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=23.66 E-value=26 Score=27.63 Aligned_cols=43 Identities=12% Similarity=0.068 Sum_probs=29.2
Q ss_pred CCCCCCCccccccCC---CCCccchhhhhhhccccccccccccccccc
Q 016859 148 DISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 148 d~~eCp~~~~~~~~e---e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
+...||+|...+... ..+.|.||..|+..|-.. ...||+.+..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~CP~Cr~~ 59 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET--SKYCPICDVQ 59 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS--CSBCTTTCCB
T ss_pred CcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh--CCcCcCCCcc
Confidence 446899998875322 258899999999876422 2567766544
No 126
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=23.25 E-value=31 Score=25.27 Aligned_cols=45 Identities=11% Similarity=0.010 Sum_probs=29.5
Q ss_pred CCCCCCCCccccccCC--CCCccchhhhhhhccccccccccccccccc
Q 016859 147 SDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (381)
Q Consensus 147 ~d~~eCp~~~~~~~~e--e~s~~~~Cl~~l~~~~l~~~~~~Cp~~~~t 192 (381)
.+.-.||+|...+... -.+.|.||..++..+-.. +...||+.+..
T Consensus 6 ~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~-~~~~CP~C~~~ 52 (78)
T 1t1h_A 6 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDA-GHKTCPKSQET 52 (78)
T ss_dssp SSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTT-TCCBCTTTCCB
T ss_pred cccCCCCCccccccCCEEcCCCCeecHHHHHHHHHH-CcCCCCCCcCC
Confidence 3456899998775322 147899999999876422 23567766543
No 127
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=23.06 E-value=6.5 Score=31.97 Aligned_cols=46 Identities=13% Similarity=0.363 Sum_probs=30.8
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
+..|.+|...-... +.+ .|...||..|+..-+. .+.-.||.|+..-
T Consensus 52 ~~~C~IC~~~~~~p-~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 52 TFQCICCQELVFRP-ITT--VCQHNVCKDCLDRSFR---AQVFSCPACRYDL 97 (124)
T ss_dssp HTBCTTTSSBCSSE-EEC--TTSCEEEHHHHHHHHH---TTCCBCTTTCCBC
T ss_pred CCCCCcCChHHcCc-EEe--eCCCcccHHHHHHHHh---HCcCCCCCCCccC
Confidence 45699998654322 222 7888888889875443 2345899998774
No 128
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=22.56 E-value=17 Score=39.11 Aligned_cols=16 Identities=44% Similarity=1.329 Sum_probs=12.3
Q ss_pred cCeeeeeeeccCCCCCcccCCeeeccccC
Q 016859 353 SNWLQCQEVLTNNDTNVCVEGTKCGKWRR 381 (381)
Q Consensus 353 ~NW~qC~~v~~~~~~~~~~~~~icgkwrr 381 (381)
--|+||+.- -||||||
T Consensus 91 ~~~~~c~~~-------------~c~~~~~ 106 (776)
T 4gut_A 91 PYWVQCTKP-------------ECRKWRQ 106 (776)
T ss_dssp CCEEECCCT-------------TTCCEEE
T ss_pred cHhhhcCcc-------------cccchhh
Confidence 459999742 4999996
No 129
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=22.48 E-value=1.1e+02 Score=22.04 Aligned_cols=18 Identities=28% Similarity=0.852 Sum_probs=12.9
Q ss_pred CCCCCCCccCccccCCCCc
Q 016859 241 KILPTDNWLCQCCSNLNSN 259 (381)
Q Consensus 241 ~~iP~G~W~Cp~C~~~~~~ 259 (381)
..+|. +|.||.|...+..
T Consensus 31 ~~lP~-dw~CP~Cg~~K~~ 48 (52)
T 1e8j_A 31 EDLPD-DWACPVCGASKDA 48 (52)
T ss_dssp TSSCT-TCCCSSSCCCTTS
T ss_pred HHCCC-CCcCCCCCCcHHH
Confidence 34444 7999999987654
No 130
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=21.60 E-value=12 Score=31.80 Aligned_cols=47 Identities=17% Similarity=0.382 Sum_probs=32.8
Q ss_pred ccccccccccCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCccCccccCCC
Q 016859 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (381)
Q Consensus 206 ~~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~G~W~Cp~C~~~~ 257 (381)
...|.+|...-. .-+..-.|...||..|+..-+. .+.-.||.|+..-
T Consensus 54 ~~~C~IC~~~~~--~p~~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 54 ELMCPICLDMLK--NTMTTKECLHRFCADCIITALR---SGNKECPTCRKKL 100 (165)
T ss_dssp HHBCTTTSSBCS--SEEEETTTCCEEEHHHHHHHHH---TTCCBCTTTCCBC
T ss_pred CCCCcccChHhh--CcCEeCCCCChhHHHHHHHHHH---hCcCCCCCCCCcC
Confidence 457999976543 2344557888899999875443 2356799998764
No 131
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=21.51 E-value=44 Score=23.72 Aligned_cols=19 Identities=26% Similarity=0.824 Sum_probs=13.2
Q ss_pred CCCCCCCCccCccccCCCCc
Q 016859 240 IKILPTDNWLCQCCSNLNSN 259 (381)
Q Consensus 240 L~~iP~G~W~Cp~C~~~~~~ 259 (381)
..++|. +|.||.|...+..
T Consensus 24 f~~lP~-dw~CP~Cg~~k~~ 42 (46)
T 6rxn_A 24 FDQLPD-DWCCPVCGVSKDQ 42 (46)
T ss_dssp GGGSCT-TCBCTTTCCBGGG
T ss_pred hhhCCC-CCcCcCCCCcHHH
Confidence 345554 5999999877543
No 132
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=21.23 E-value=52 Score=22.68 Aligned_cols=29 Identities=28% Similarity=0.648 Sum_probs=24.3
Q ss_pred cccccccccCCCCCeEEeccCCCCCCCcccC
Q 016859 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCN 237 (381)
Q Consensus 207 ~~C~vC~~~~~~~~LLlCD~Cd~ayH~~CL~ 237 (381)
.+|..|++.-. .-+.|..|....|..|..
T Consensus 15 t~C~~C~~~l~--qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 15 AFCDICQKFLL--NGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp EECTTSSSEEC--SEEECTTTTCCBCSTTSS
T ss_pred cCCCCcccccc--cCCEeCCCCCeEChhHHh
Confidence 57888887544 678999999999999987
No 133
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=20.08 E-value=28 Score=23.21 Aligned_cols=14 Identities=21% Similarity=0.764 Sum_probs=11.4
Q ss_pred CCCccCccccCCCC
Q 016859 245 TDNWLCQCCSNLNS 258 (381)
Q Consensus 245 ~G~W~Cp~C~~~~~ 258 (381)
+|+|-|..|+....
T Consensus 16 egdwcchkcvpegk 29 (36)
T 4b2u_A 16 EGDWCCHKCVPEGK 29 (36)
T ss_dssp GCCSSSSEEEEETT
T ss_pred ccCeeeecccccCc
Confidence 68999999987643
Done!