BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016863
(381 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O61460|VAB1_CAEEL Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab-1 PE=1 SV=1
Length = 1122
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 12 ARQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLLFHRVDPEAVL---SCKN 68
A QR ++ ++ M ++ + H + +T+ R +LLF+ D +A L SCK
Sbjct: 75 ANQRAYVTCNYDM----INPSNWLFSH-FIEVKTARRIYIELLFNTRDCDAYLNPKSCKE 129
Query: 69 VFSSFQKVPRSPTPST------------------GKTPKSDSEMRRKPLGMARDEGELPV 110
FS + K ++ P + G+ +S+S M + LGM D +
Sbjct: 130 TFSVYLKQFKTSRPGSTKIEKERFSEDIDNWKNIGRLARSNSNMTTETLGMEIDSDTKTI 189
Query: 111 RLLADIDSLFLTCQGLSVHYKLC 133
R+ + + L+ + ++Y++C
Sbjct: 190 RIAFEEQGICLSLLNVKIYYRIC 212
>sp|Q9SZM1|EXP20_ARATH Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1
Length = 256
Score = 35.8 bits (81), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 129 HYKLCLPGSPPRSLSSTTFLEPKST--------CNTPQTAVGRLKLDRQAFSALSKTQYH 180
H + CL GSP +++T F P S CN P+ L+L AF+ +++T+
Sbjct: 90 HIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKE---HLELSHAAFTGIAETRAE 146
Query: 181 HLPRSY 186
+P Y
Sbjct: 147 MIPIQY 152
>sp|P80299|HYES_RAT Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1
SV=1
Length = 554
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 236 VEGNGQFGIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTS 284
VE I L HGF FSWR+ + LA Q G V A D G+G +S
Sbjct: 251 VEMGSGPAICLCHGFPESWFSWRYQIPALA-QAGFRVLAIDMKGYGDSS 298
>sp|Q8TB40|ABHD4_HUMAN Abhydrolase domain-containing protein 4 OS=Homo sapiens GN=ABHD4
PE=2 SV=1
Length = 342
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 237 EGNGQFGIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTSR 285
E N + +++VHGFGGGV W M L+ + T+ FD G+G +SR
Sbjct: 64 EQNDRTPLVMVHGFGGGVGLWILNMDSLSAR--RTLHTFDLLGFGRSSR 110
>sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1
Length = 555
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 243 GIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTS 284
+ L HGF FSWR+ + LA Q G V A D G+G +S
Sbjct: 260 AVCLCHGFPESWFSWRYQIPALA-QAGFRVLAVDMKGYGESS 300
>sp|P34914|HYES_MOUSE Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2
Length = 554
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 243 GIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTS 284
+ L HGF FSWR+ + LA Q G V A D G+G +S
Sbjct: 258 ALCLCHGFPESWFSWRYQIPALA-QAGFRVLAIDMKGYGDSS 298
>sp|O27637|MPTE_METTH 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=mptE PE=3 SV=1
Length = 232
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 203 SATTTTLSEDIPILNLDDTVPDI---EMDSGALEQDVEGNGQFGIILVHGFGGGVFSWRH 259
ATT L ED+ +PDI ++D G +E +E N Q +++VH G + + R
Sbjct: 83 GATTALLEEDV--------LPDIIVTDLD-GKMEDIIEANRQGAVVVVHAHGNNLPALRR 133
Query: 260 VMGVLARQIGCT 271
+ +L IG T
Sbjct: 134 YLPLLQNIIGTT 145
>sp|P27747|ACOC_CUPNH Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system OS=Cupriavidus necator (strain ATCC
17699 / H16 / DSM 428 / Stanier 337) GN=acoC PE=1 SV=3
Length = 374
Score = 32.3 bits (72), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 237 EGNGQFGIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTS 284
+G G ++ +HGFGG + +W + LA TV A D PG G +S
Sbjct: 131 KGGGAETVLFIHGFGGDLDNWLFNLDPLAD--AYTVVALDLPGHGQSS 176
>sp|Q59695|ACOC_PSEPU Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system OS=Pseudomonas putida GN=acoC PE=3 SV=1
Length = 370
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 238 GNGQFGIILVHGFGGGVFSWRHVMGVLARQIGCTVAAFDRPGWGLTSR-LRQKDWEE 293
G G ++LVHGFGG + +W LA + V A D PG G +++ L++ D +E
Sbjct: 130 GEGGTPLVLVHGFGGDLNNWLFNHPALAAE--RRVIALDLPGHGESAKALQRGDLDE 184
>sp|P96851|HSAD_MYCTU 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),
2-diene-4-oate hydrolase OS=Mycobacterium tuberculosis
GN=hsaD PE=1 SV=1
Length = 291
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 238 GNGQFGIILVHGFGGGVFSWRHV---MGVLARQIGCTVAAFDRPGWGLTSRLRQKDWEEK 294
GN Q ++L+HG G G SW + + VLAR V A D+PG+G + + E
Sbjct: 34 GNDQT-VVLLHGGGPGAASWTNFSRNIAVLARHF--HVLAVDQPGYGHSDKR-----AEH 85
Query: 295 GSINPYKLETQVAIRGV 311
G N Y +A++G+
Sbjct: 86 GQFNRY---AAMALKGL 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,466,717
Number of Sequences: 539616
Number of extensions: 5828278
Number of successful extensions: 13486
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 13486
Number of HSP's gapped (non-prelim): 20
length of query: 381
length of database: 191,569,459
effective HSP length: 119
effective length of query: 262
effective length of database: 127,355,155
effective search space: 33367050610
effective search space used: 33367050610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)