Query 016866
Match_columns 381
No_of_seqs 369 out of 3418
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 05:05:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016866.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016866hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 2.1E-42 7.1E-47 327.7 30.7 309 35-380 12-320 (323)
2 2qrd_G Protein C1556.08C; AMPK 100.0 3.7E-36 1.3E-40 286.0 32.4 306 37-380 6-315 (334)
3 2v8q_E 5'-AMP-activated protei 100.0 3.8E-36 1.3E-40 285.6 25.3 300 41-380 23-323 (330)
4 3kh5_A Protein MJ1225; AMPK, A 100.0 2.1E-33 7E-38 259.9 24.9 270 54-379 4-280 (280)
5 3ddj_A CBS domain-containing p 100.0 4.4E-33 1.5E-37 260.4 19.0 264 52-380 19-285 (296)
6 2yzq_A Putative uncharacterize 100.0 1.1E-30 3.8E-35 242.1 15.8 257 63-380 9-279 (282)
7 3kh5_A Protein MJ1225; AMPK, A 99.9 5E-24 1.7E-28 196.7 19.8 195 154-379 9-204 (280)
8 3ddj_A CBS domain-containing p 99.9 8.8E-24 3E-28 197.2 14.6 191 152-379 23-213 (296)
9 3t4n_C Nuclear protein SNF4; C 99.9 6.3E-22 2.2E-26 186.8 17.1 200 156-380 39-248 (323)
10 2v8q_E 5'-AMP-activated protei 99.9 3E-22 1E-26 189.7 14.7 205 154-379 40-250 (330)
11 2yzq_A Putative uncharacterize 99.9 1.4E-21 4.8E-26 180.6 12.6 173 154-375 6-179 (282)
12 2qrd_G Protein C1556.08C; AMPK 99.9 4.9E-21 1.7E-25 181.6 15.7 207 154-379 27-242 (334)
13 4esy_A CBS domain containing m 99.8 4.1E-21 1.4E-25 164.5 9.4 137 240-380 19-162 (170)
14 3lv9_A Putative transporter; C 99.8 5.1E-19 1.8E-23 147.7 14.4 119 240-380 24-145 (148)
15 3k6e_A CBS domain protein; str 99.8 1.9E-19 6.4E-24 152.1 11.4 122 242-379 18-141 (156)
16 3i8n_A Uncharacterized protein 99.8 5.7E-19 2E-23 144.1 12.4 120 240-380 7-129 (130)
17 3nqr_A Magnesium and cobalt ef 99.8 3.6E-19 1.2E-23 144.7 9.6 120 240-380 4-126 (127)
18 3kpb_A Uncharacterized protein 99.8 1E-18 3.5E-23 140.7 12.1 119 240-380 2-120 (122)
19 3hf7_A Uncharacterized CBS-dom 99.8 9.8E-19 3.4E-23 142.9 11.9 122 240-380 3-127 (130)
20 3lhh_A CBS domain protein; str 99.8 2.4E-18 8.2E-23 147.6 14.4 119 240-380 43-164 (172)
21 2rih_A Conserved protein with 99.8 2E-18 6.7E-23 142.9 12.6 124 236-379 2-127 (141)
22 3jtf_A Magnesium and cobalt ef 99.8 9.9E-19 3.4E-23 142.6 10.4 118 240-380 6-126 (129)
23 1pbj_A Hypothetical protein; s 99.8 5.4E-18 1.8E-22 136.9 13.6 121 240-380 2-122 (125)
24 3lfr_A Putative metal ION tran 99.8 8.1E-19 2.8E-23 144.5 8.6 121 240-380 4-127 (136)
25 3oco_A Hemolysin-like protein 99.8 2.5E-18 8.5E-23 144.5 11.3 119 240-380 21-143 (153)
26 2uv4_A 5'-AMP-activated protei 99.8 4.9E-18 1.7E-22 142.4 12.5 123 247-380 29-151 (152)
27 2p9m_A Hypothetical protein MJ 99.8 9E-18 3.1E-22 138.1 13.8 122 240-380 9-136 (138)
28 3gby_A Uncharacterized protein 99.8 1.8E-18 6E-23 140.8 9.3 121 240-380 6-126 (128)
29 4gqw_A CBS domain-containing p 99.8 3.9E-18 1.3E-22 142.4 11.5 127 240-380 6-143 (152)
30 2ef7_A Hypothetical protein ST 99.8 7.4E-18 2.5E-22 137.8 13.0 120 240-379 5-124 (133)
31 2yzi_A Hypothetical protein PH 99.8 1E-17 3.5E-22 137.8 13.8 121 240-380 8-129 (138)
32 2o16_A Acetoin utilization pro 99.8 9.6E-18 3.3E-22 142.0 13.9 125 240-379 6-134 (160)
33 3fhm_A Uncharacterized protein 99.8 5.9E-18 2E-22 144.0 12.4 123 240-380 25-150 (165)
34 3ctu_A CBS domain protein; str 99.8 4E-18 1.4E-22 143.5 10.8 125 240-380 16-142 (156)
35 3fv6_A YQZB protein; CBS domai 99.7 1.1E-17 3.7E-22 141.4 13.1 122 240-380 18-144 (159)
36 2nyc_A Nuclear protein SNF4; b 99.7 1.2E-17 4E-22 138.2 12.8 126 244-380 16-141 (144)
37 3k2v_A Putative D-arabinose 5- 99.7 9.6E-18 3.3E-22 140.1 12.3 118 240-376 29-148 (149)
38 1y5h_A Hypothetical protein RV 99.7 3.9E-18 1.3E-22 139.5 9.5 122 240-380 9-131 (133)
39 3lqn_A CBS domain protein; csg 99.7 8.5E-18 2.9E-22 140.4 11.1 125 240-380 16-143 (150)
40 1pvm_A Conserved hypothetical 99.7 1.7E-17 5.6E-22 143.8 13.2 124 239-379 9-132 (184)
41 3sl7_A CBS domain-containing p 99.7 6.4E-18 2.2E-22 145.4 9.3 138 240-380 5-156 (180)
42 2rc3_A CBS domain; in SITU pro 99.7 2.4E-17 8.3E-22 135.1 12.3 121 240-380 7-131 (135)
43 4esy_A CBS domain containing m 99.7 3.8E-18 1.3E-22 146.0 7.7 155 41-213 6-162 (170)
44 3l2b_A Probable manganase-depe 99.7 4.8E-17 1.7E-21 147.4 15.3 198 153-378 11-242 (245)
45 2pfi_A Chloride channel protei 99.7 3.4E-17 1.2E-21 138.6 13.1 132 239-380 13-147 (164)
46 2emq_A Hypothetical conserved 99.7 3.6E-17 1.2E-21 137.6 12.8 125 240-380 12-139 (157)
47 3ocm_A Putative membrane prote 99.7 5.6E-17 1.9E-21 139.2 13.5 118 240-380 37-157 (173)
48 1o50_A CBS domain-containing p 99.7 5.1E-17 1.8E-21 136.9 13.0 125 240-380 17-153 (157)
49 4fry_A Putative signal-transdu 99.7 3.6E-17 1.2E-21 137.8 12.0 126 236-380 4-135 (157)
50 1yav_A Hypothetical protein BS 99.7 3.3E-17 1.1E-21 138.3 11.5 124 240-379 15-141 (159)
51 3kxr_A Magnesium transporter, 99.7 7.1E-17 2.4E-21 142.5 13.3 117 239-379 54-173 (205)
52 1vr9_A CBS domain protein/ACT 99.7 4.3E-17 1.5E-21 144.8 10.9 121 235-379 9-129 (213)
53 1vr9_A CBS domain protein/ACT 99.7 1.5E-16 5.1E-21 141.2 13.2 154 153-359 17-171 (213)
54 3oi8_A Uncharacterized protein 99.7 4.4E-17 1.5E-21 137.3 9.2 114 240-375 39-155 (156)
55 2j9l_A Chloride channel protei 99.7 1.7E-16 5.7E-21 137.2 12.1 138 240-379 12-164 (185)
56 3k6e_A CBS domain protein; str 99.7 1.8E-16 6E-21 133.8 11.2 118 156-296 24-141 (156)
57 3lv9_A Putative transporter; C 99.7 3.7E-16 1.3E-20 130.2 12.8 116 153-296 27-144 (148)
58 2d4z_A Chloride channel protei 99.7 3.2E-16 1.1E-20 142.0 13.3 140 239-380 13-246 (250)
59 3kxr_A Magnesium transporter, 99.7 5.9E-16 2E-20 136.5 14.1 122 146-298 51-175 (205)
60 3i8n_A Uncharacterized protein 99.7 3.7E-16 1.3E-20 127.3 11.6 119 151-296 8-128 (130)
61 3lhh_A CBS domain protein; str 99.7 8.9E-16 3.1E-20 131.5 13.9 119 151-297 44-164 (172)
62 3kpb_A Uncharacterized protein 99.7 1.2E-15 4.3E-20 122.4 12.6 114 154-296 6-119 (122)
63 3nqr_A Magnesium and cobalt ef 99.6 2.9E-16 1E-20 127.4 8.2 115 154-295 8-124 (127)
64 2oux_A Magnesium transporter; 99.6 6.9E-16 2.3E-20 143.2 11.3 117 239-379 137-258 (286)
65 3jtf_A Magnesium and cobalt ef 99.6 8.5E-16 2.9E-20 125.0 10.5 114 154-296 10-125 (129)
66 3gby_A Uncharacterized protein 99.6 7E-16 2.4E-20 125.3 9.5 117 153-296 9-125 (128)
67 2ef7_A Hypothetical protein ST 99.6 2.3E-15 8E-20 122.8 12.6 118 153-297 8-125 (133)
68 2yvy_A MGTE, Mg2+ transporter 99.6 1.3E-15 4.6E-20 140.6 12.0 117 240-380 136-257 (278)
69 3lfr_A Putative metal ION tran 99.6 7.3E-16 2.5E-20 126.7 9.0 117 154-296 8-126 (136)
70 1pbj_A Hypothetical protein; s 99.6 4.1E-15 1.4E-19 119.8 12.4 117 154-297 6-122 (125)
71 4gqw_A CBS domain-containing p 99.6 8.8E-16 3E-20 128.0 8.7 132 153-296 9-142 (152)
72 2o16_A Acetoin utilization pro 99.6 2.1E-15 7.3E-20 127.4 11.1 126 153-296 9-134 (160)
73 3fv6_A YQZB protein; CBS domai 99.6 2.5E-15 8.4E-20 126.9 11.3 117 154-296 22-143 (159)
74 2yzi_A Hypothetical protein PH 99.6 4.8E-15 1.6E-19 121.7 12.6 119 153-297 11-129 (138)
75 3l2b_A Probable manganase-depe 99.6 5.9E-16 2E-20 140.2 7.6 212 53-295 7-242 (245)
76 3hf7_A Uncharacterized CBS-dom 99.6 3.4E-15 1.2E-19 121.7 11.2 115 157-296 12-126 (130)
77 1o50_A CBS domain-containing p 99.6 7.6E-15 2.6E-19 123.5 13.5 131 153-296 20-152 (157)
78 2p9m_A Hypothetical protein MJ 99.6 3.2E-15 1.1E-19 122.7 10.9 118 153-296 12-135 (138)
79 3lqn_A CBS domain protein; csg 99.6 5.5E-15 1.9E-19 123.2 12.4 122 154-297 20-143 (150)
80 3fhm_A Uncharacterized protein 99.6 8.6E-15 2.9E-19 124.3 13.4 116 157-297 35-150 (165)
81 3k2v_A Putative D-arabinose 5- 99.6 2.6E-15 8.9E-20 125.2 9.6 115 153-293 32-148 (149)
82 2emq_A Hypothetical conserved 99.6 1.1E-14 3.7E-19 122.3 13.2 124 152-297 14-139 (157)
83 1pvm_A Conserved hypothetical 99.6 6.9E-15 2.3E-19 127.2 12.2 121 153-297 13-133 (184)
84 2uv4_A 5'-AMP-activated protei 99.6 1E-14 3.5E-19 122.0 12.8 116 157-296 29-150 (152)
85 2nyc_A Nuclear protein SNF4; b 99.6 7.2E-15 2.4E-19 121.3 11.6 119 154-296 16-140 (144)
86 2rc3_A CBS domain; in SITU pro 99.6 4.8E-15 1.6E-19 121.3 10.4 114 157-296 17-130 (135)
87 2rih_A Conserved protein with 99.6 1.2E-14 4E-19 120.0 12.6 119 153-296 9-127 (141)
88 3ocm_A Putative membrane prote 99.6 9.3E-15 3.2E-19 125.3 12.3 118 151-297 38-157 (173)
89 3oco_A Hemolysin-like protein 99.6 5.2E-15 1.8E-19 124.0 10.3 128 50-215 17-145 (153)
90 3ctu_A CBS domain protein; str 99.6 3E-15 1E-19 125.7 8.5 121 154-297 20-142 (156)
91 1y5h_A Hypothetical protein RV 99.6 4.4E-15 1.5E-19 121.1 8.5 117 154-296 13-130 (133)
92 3oi8_A Uncharacterized protein 99.6 5.6E-15 1.9E-19 124.3 8.9 114 151-292 40-155 (156)
93 3pc3_A CG1753, isoform A; CBS, 99.6 1.3E-14 4.6E-19 145.7 12.2 124 238-380 383-511 (527)
94 2d4z_A Chloride channel protei 99.5 6.2E-14 2.1E-18 127.0 14.1 141 151-296 15-245 (250)
95 2yvy_A MGTE, Mg2+ transporter 99.5 5.8E-14 2E-18 129.6 14.0 121 146-297 132-257 (278)
96 3sl7_A CBS domain-containing p 99.5 1.9E-14 6.4E-19 123.5 9.7 138 154-297 9-156 (180)
97 1yav_A Hypothetical protein BS 99.5 2.6E-14 8.9E-19 120.4 9.8 122 154-297 19-142 (159)
98 4fry_A Putative signal-transdu 99.5 6.2E-14 2.1E-18 117.8 12.1 116 157-298 21-136 (157)
99 2zy9_A Mg2+ transporter MGTE; 99.5 3.1E-14 1.1E-18 140.9 11.7 117 239-379 155-276 (473)
100 2oux_A Magnesium transporter; 99.5 4.7E-14 1.6E-18 130.8 12.2 121 146-297 134-259 (286)
101 2pfi_A Chloride channel protei 99.5 8.3E-14 2.8E-18 117.6 12.3 124 154-297 18-147 (164)
102 2j9l_A Chloride channel protei 99.5 4.6E-14 1.6E-18 121.7 10.5 134 159-297 25-165 (185)
103 2zy9_A Mg2+ transporter MGTE; 99.5 2.5E-13 8.5E-18 134.4 15.3 121 146-297 152-277 (473)
104 3org_A CMCLC; transporter, tra 99.5 1.1E-14 3.9E-19 149.0 5.3 139 239-379 453-624 (632)
105 3usb_A Inosine-5'-monophosphat 99.5 3.2E-13 1.1E-17 134.5 13.3 114 243-379 117-233 (511)
106 3usb_A Inosine-5'-monophosphat 99.4 5.2E-12 1.8E-16 125.8 17.4 156 154-359 118-276 (511)
107 1zfj_A Inosine monophosphate d 99.4 1.8E-12 6.2E-17 129.1 13.6 115 242-379 93-210 (491)
108 3pc3_A CG1753, isoform A; CBS, 99.4 8.3E-13 2.8E-17 132.6 9.6 121 151-298 386-512 (527)
109 4fxs_A Inosine-5'-monophosphat 99.4 2.1E-13 7.1E-18 135.3 4.5 113 243-378 93-207 (496)
110 1me8_A Inosine-5'-monophosphat 99.3 8.2E-14 2.8E-18 138.8 0.1 113 245-379 103-220 (503)
111 1vrd_A Inosine-5'-monophosphat 99.3 1.3E-13 4.5E-18 137.4 0.2 115 242-379 98-214 (494)
112 4avf_A Inosine-5'-monophosphat 99.3 1.9E-13 6.5E-18 135.5 0.0 113 242-378 91-205 (490)
113 1zfj_A Inosine monophosphate d 99.3 7.9E-11 2.7E-15 117.2 18.2 115 154-296 95-210 (491)
114 1me8_A Inosine-5'-monophosphat 99.3 2.8E-13 9.4E-18 135.0 0.3 165 155-367 103-269 (503)
115 4af0_A Inosine-5'-monophosphat 99.3 4.4E-13 1.5E-17 130.5 0.0 109 245-377 144-255 (556)
116 3org_A CMCLC; transporter, tra 99.3 5.2E-12 1.8E-16 129.3 7.4 136 152-294 456-622 (632)
117 4fxs_A Inosine-5'-monophosphat 99.2 4E-12 1.4E-16 126.1 5.6 113 154-296 94-208 (496)
118 4af0_A Inosine-5'-monophosphat 99.2 2.5E-12 8.4E-17 125.3 2.4 114 154-295 143-256 (556)
119 1vrd_A Inosine-5'-monophosphat 99.2 6E-12 2E-16 125.4 3.8 113 154-296 100-214 (494)
120 4avf_A Inosine-5'-monophosphat 99.2 9.2E-12 3.2E-16 123.4 5.0 112 154-296 93-206 (490)
121 1jcn_A Inosine monophosphate d 99.1 4.3E-13 1.5E-17 134.2 -7.1 117 241-378 110-231 (514)
122 2cu0_A Inosine-5'-monophosphat 99.1 6.1E-12 2.1E-16 125.0 0.2 109 244-378 98-206 (486)
123 3ghd_A A cystathionine beta-sy 99.0 4.1E-10 1.4E-14 81.0 6.7 69 249-334 2-70 (70)
124 1jcn_A Inosine monophosphate d 99.0 3.2E-11 1.1E-15 120.6 -0.9 117 154-295 113-231 (514)
125 2cu0_A Inosine-5'-monophosphat 99.0 8.5E-11 2.9E-15 116.7 1.7 160 154-369 98-257 (486)
126 3ghd_A A cystathionine beta-sy 98.8 6.9E-09 2.4E-13 74.5 7.2 47 159-212 2-48 (70)
127 3fio_A A cystathionine beta-sy 98.7 1.9E-08 6.4E-13 71.8 6.7 49 248-297 1-49 (70)
128 3fio_A A cystathionine beta-sy 98.6 1.5E-07 5.1E-12 67.0 7.5 48 330-379 1-48 (70)
129 1tif_A IF3-N, translation init 56.8 21 0.0007 25.3 5.0 30 270-299 13-42 (78)
130 1tif_A IF3-N, translation init 35.0 56 0.0019 23.0 4.4 25 352-377 13-37 (78)
131 1svj_A Potassium-transporting 34.2 18 0.00061 29.2 2.0 35 340-376 121-155 (156)
132 3k2t_A LMO2511 protein; lister 24.7 1.2E+02 0.0043 19.7 4.4 31 335-365 10-40 (57)
133 2fwh_A Thiol:disulfide interch 21.3 82 0.0028 23.7 3.7 55 63-117 66-128 (134)
134 1p0z_A Sensor kinase CITA; tra 20.4 71 0.0024 24.3 3.1 17 272-288 105-121 (131)
135 2hje_A Autoinducer 2 sensor ki 20.1 58 0.002 27.7 2.6 19 352-370 119-137 (221)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=2.1e-42 Score=327.74 Aligned_cols=309 Identities=25% Similarity=0.445 Sum_probs=248.4
Q ss_pred cHHHHHHHHHHHHHHhhhCcccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCcEEEEeehHHHHHHHHH
Q 016866 35 SEADLQLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRE 114 (381)
Q Consensus 35 ~~~~~~~~~~~~~~~l~~~~~~d~~p~s~~vi~ld~~~~v~~A~~~l~~~~i~~~pV~d~~~~~~vGilt~~D~~~il~~ 114 (381)
.+.+.+...+++.+||++++|||+||.+.++++++.+.|+.+|++.|.+++++++||||++.++++|++|..|++.++..
T Consensus 12 ~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~ 91 (323)
T 3t4n_C 12 VSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQY 91 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHH
Confidence 34555668899999999999999999999999999999999999999999999999999887789999999999998876
Q ss_pred hccCCCCCChhHHhhccHHHHHHHHHhhhccccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCC
Q 016866 115 LGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGS 194 (381)
Q Consensus 115 ~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~ 194 (381)
+...+.. .+.++.+....|++.....+ .|.++++++.+++++.+|++.|.+++++++||++++..++
T Consensus 92 ~~~~~~~--~~~l~~~~~~~v~~i~~~~~----------~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~- 158 (323)
T 3t4n_C 92 YFSNPDK--FELVDKLQLDGLKDIERALG----------VDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETH- 158 (323)
T ss_dssp HHHCGGG--GGGGGGCBHHHHHHHHHHTT----------C----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTC-
T ss_pred HHcCcch--hHHHHHHHHHHHHHHHHHhC----------CCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCC-
Confidence 6553322 23555556666776655433 6788999999999999999999999999999998732222
Q ss_pred ccceEEEeehhhHHHHHhhhcccCCCCCccccCccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEE
Q 016866 195 CQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIP 274 (381)
Q Consensus 195 ~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lp 274 (381)
.+.++|++|.+|+++++..+... ......+++++.++ |.++++++.+++++.+|++.|.+++++++|
T Consensus 159 ~~~l~Givt~~di~~~l~~~~~~----~~~~~~~v~~~~~~---------m~~~~~~v~~~~~~~~~~~~m~~~~~~~~p 225 (323)
T 3t4n_C 159 REIVVSVLTQYRILKFVALNCRE----THFLKIPIGDLNII---------TQDNMKSCQMTTPVIDVIQMLTQGRVSSVP 225 (323)
T ss_dssp CEEEEEEEEHHHHHHHHHHHCGG----GGGCCSBGGGTTCS---------BCTTCCCBCTTSBHHHHHHHHHHHTCSEEE
T ss_pred ccceEEEecHHHHHHHHHhcCCc----hhhhhCcHHHcCCC---------CCCCcEEECCCCcHHHHHHHHHHcCCCEEE
Confidence 11299999999999998766533 12233344443221 667899999999999999999999999999
Q ss_pred EEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCE
Q 016866 275 IVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRR 354 (381)
Q Consensus 275 Vvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~ 354 (381)
|+|++|+++|++|.+|+++++..+.+... +.++.+++..... ...++++|.+++++.+|++.|.++++++
T Consensus 226 Vvd~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~~~~-------~~~~~~~v~~~~~l~~~~~~m~~~~~~~ 295 (323)
T 3t4n_C 226 IIDENGYLINVYEAYDVLGLIKGGIYNDL---SLSVGEALMRRSD-------DFEGVYTCTKNDKLSTIMDNIRKARVHR 295 (323)
T ss_dssp EECTTCBEEEEEETTHHHHHHHTTHHHHT---TSBHHHHGGGSCT-------TCCCCEEECTTCBHHHHHHHHHHSCCCE
T ss_pred EECCCCeEEEEEeHHHHHHHHhhchhhhc---cCCHHHHHhhccc-------cCCCCEEECCCCCHHHHHHHHHHhCCCE
Confidence 99999999999999999998775543332 4678885543110 0026899999999999999999999999
Q ss_pred EEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 355 LVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 355 l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+||+| ++|+++|+||.+||++++++
T Consensus 296 l~Vvd-~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 296 FFVVD-DVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp EEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred EEEEC-CCCcEEEEEEHHHHHHHHHh
Confidence 99999 47999999999999999975
No 2
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=100.00 E-value=3.7e-36 Score=286.01 Aligned_cols=306 Identities=22% Similarity=0.434 Sum_probs=237.6
Q ss_pred HHHHHHHHHHHHHhhhCcccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCcEEEEeehHHHHHHHHHhc
Q 016866 37 ADLQLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELG 116 (381)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~d~~p~s~~vi~ld~~~~v~~A~~~l~~~~i~~~pV~d~~~~~~vGilt~~D~~~il~~~~ 116 (381)
.+.+...+.+.+||...+++|+|+.+.++++++.+.|+.+|++.|.+++++++||||++.++++|+++..|++..+....
T Consensus 6 ~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~ 85 (334)
T 2qrd_G 6 ETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYY 85 (334)
T ss_dssp HHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHh
Confidence 34455788999999999999999999999999999999999999999999999999987678999999999998775442
Q ss_pred cCC-CCCChhHHhhccHHHHHHHHHhhhccccCCCCCCCCCCCc--eEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCC
Q 016866 117 TNG-SNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPL--VQAGPYDSLKEVALKILQNKVATVPIIHSTGPAG 193 (381)
Q Consensus 117 ~~~-~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~--i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g 193 (381)
... .....+.+....+..+.+.... +|..+. +++.+++++.+|++.|.+++++++||+|++ .+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~l~~------------im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--~~ 151 (334)
T 2qrd_G 86 QSSSFPEAIAEIDKFRLLGLREVERK------------IGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVD--GE 151 (334)
T ss_dssp HHCSCGGGGGGGGSCBHHHHHHHHHH------------HTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEE--TT
T ss_pred hccCCccHHHHHhhhchhhHHHHHHh------------hccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCC--CC
Confidence 210 0001123345566666655432 345566 999999999999999999999999999762 12
Q ss_pred -CccceEEEeehhhHHHHHhhhcccCCCCCccccCccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcE
Q 016866 194 -SCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSS 272 (381)
Q Consensus 194 -~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~ 272 (381)
..+.++|++|..|+++++....... .....+++++ +.+|.+++.++.+++++.+|++.|.++++++
T Consensus 152 ~~~~~~~Givt~~dl~~~~~~~~~~~----~~~~~~v~~l---------~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~ 218 (334)
T 2qrd_G 152 TGSEMIVSVLTQYRILKFISMNCKET----AMLRVPLNQM---------TIGTWSNLATASMETKVYDVIKMLAEKNISA 218 (334)
T ss_dssp TTEEEEEEEEEHHHHHHHHHHHCGGG----GGCCCBGGGS---------SCSBCSSCCCBCTTSBHHHHHHHHHHHTCSE
T ss_pred cCccceEEEeeHHHHHHHHHhhccch----hhhhCcHHHh---------CCcccCCceEECCCCcHHHHHHHHHHcCCcE
Confidence 0012999999999999887542210 1122233322 1137788999999999999999999999999
Q ss_pred EEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCC
Q 016866 273 IPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGV 352 (381)
Q Consensus 273 lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~ 352 (381)
+||+|++|+++|++|.+|+++.+..+.+... +.++.+++..... . + .++.+|.+++++.+|++.|.++++
T Consensus 219 ~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~~~~---~--~--~~~~~v~~~~~l~~~~~~m~~~~~ 288 (334)
T 2qrd_G 219 VPIVNSEGTLLNVYESVDVMHLIQDGDYSNL---DLSVGEALLKRPA---N--F--DGVHTCRATDRLDGIFDAIKHSRV 288 (334)
T ss_dssp EEEECTTCBEEEEEETHHHHHHHTTSCGGGG---GSBHHHHHTTCCT---T--C--CCCCEECTTCBHHHHHHHHHHSCC
T ss_pred EEEEcCCCcEEEEEEHHHHHHHhhccccccc---cCcHHHHHhcccc---c--C--CCCEEECCCCcHHHHHHHHHHcCC
Confidence 9999988999999999999997765433222 3677774432000 0 0 368899999999999999999999
Q ss_pred CEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 353 RRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 353 ~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+++||+| ++|+++|+||.+||++++.+
T Consensus 289 ~~l~Vvd-~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 289 HRLFVVD-ENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp CEEEEEC-TTCBEEEEEEHHHHHHHHHS
T ss_pred CEEEEEC-CCCeEEEEEeHHHHHHHHHh
Confidence 9999999 47999999999999999864
No 3
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=100.00 E-value=3.8e-36 Score=285.57 Aligned_cols=300 Identities=32% Similarity=0.554 Sum_probs=239.6
Q ss_pred HHHHHHHHHhhhCcccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCcEEEEeehHHHHHHHHHhccCCC
Q 016866 41 LSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGS 120 (381)
Q Consensus 41 ~~~~~~~~~l~~~~~~d~~p~s~~vi~ld~~~~v~~A~~~l~~~~i~~~pV~d~~~~~~vGilt~~D~~~il~~~~~~~~ 120 (381)
..++.+++||.+.+++|+|+.+.++++++.+.|+.+|++.|.+++++++||+|.+.++++|++|..|++..+......+.
T Consensus 23 ~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~ 102 (330)
T 2v8q_E 23 SNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSAL 102 (330)
T ss_dssp CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccc
Confidence 35678999999999999999999999999999999999999999999999999876789999999999987754331110
Q ss_pred CCChhHHhhccHHHHHHHHHhhhccccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEE
Q 016866 121 NLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILY 200 (381)
Q Consensus 121 ~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~g 200 (381)
....+++...+..|..... .+|.++++++.+++++.+|++.|.+++++++||+|+ +.| +++|
T Consensus 103 -~~~~~l~~~~~~~~~~~~~------------~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~---~~~G 164 (330)
T 2v8q_E 103 -VQIYELEEHKIETWREVYL------------QDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP--ESG---NTLY 164 (330)
T ss_dssp -TTCCCGGGCBHHHHHHHHS------------SSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT--TTC---CEEE
T ss_pred -cchhHHhhccHHHHHHHHh------------hcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC--CCC---cEEE
Confidence 1112344445666654322 268899999999999999999999999999999963 236 7999
Q ss_pred EeehhhHHHHHhhhcccCCCCCccccCccccccccccccccccccC-CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCC
Q 016866 201 LASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANG-RPFAMLRPTASLGSALALLVQADVSSIPIVDDN 279 (381)
Q Consensus 201 ils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig~~~~~v~~~~~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 279 (381)
++|..|+++++.......+ .......+++++.+ |. +++.++.+++++.++++.|.+++++++||+|++
T Consensus 165 ivt~~dl~~~~~~~~~~~~-~~~~~~~~v~~~~v----------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~ 233 (330)
T 2v8q_E 165 ILTHKRILKFLKLFITEFP-KPEFMSKSLEELQI----------GTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK 233 (330)
T ss_dssp EECHHHHHHHHHHHSCSSS-CCGGGGSBHHHHTC----------SBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT
T ss_pred EEcHHHHHHHHHHHhhccC-chhhhcCCHHHhcc----------cCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCC
Confidence 9999999998876543211 01123334444322 32 578899999999999999999999999999989
Q ss_pred CcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEe
Q 016866 280 DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVE 359 (381)
Q Consensus 280 g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd 359 (381)
|+++|++|.+|+++....+.+... +.++.+++..+. .|..++.+|.+++++.+|++.|.+++++++||+|
T Consensus 234 ~~l~Giit~~dl~~~~~~~~~~~~---~~~v~~~~~~~~-------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 303 (330)
T 2v8q_E 234 GRVVDIYSKFDVINLAAEKTYNNL---DVSVTKALQHRS-------HYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVD 303 (330)
T ss_dssp SBEEEEEEGGGTGGGGGSSCCCCC---SSBHHHHGGGCC-------SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcEEEEEEHHHHHHHHhccccccc---cCcHHHHHhccc-------cccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEc
Confidence 999999999999986654333222 467888664322 4567899999999999999999999999999999
Q ss_pred CCCCeEEEEEehHHHHHHhhc
Q 016866 360 AGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 360 ~~~~~liGiIs~~DIl~~l~~ 380 (381)
+ +|+++|+||.+||++++..
T Consensus 304 ~-~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 304 E-HDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp T-TSBEEEEEEHHHHHHHHHS
T ss_pred C-CCcEEEEEeHHHHHHHHHh
Confidence 4 7999999999999999864
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=2.1e-33 Score=259.89 Aligned_cols=270 Identities=14% Similarity=0.283 Sum_probs=208.7
Q ss_pred cccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCcEEEEeehHHHHHHHHHhccCCCCCChhHHhhccHH
Q 016866 54 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 133 (381)
Q Consensus 54 ~~~d~~p~s~~vi~ld~~~~v~~A~~~l~~~~i~~~pV~d~~~~~~vGilt~~D~~~il~~~~~~~~~~~~~~l~~~~i~ 133 (381)
++.+.+.. .++++++++.|+.+|++.|.+++++++||+|++.++++|++|..|++..+..... ...++.....
T Consensus 4 ~v~~~i~~-~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~------~~~~~~~~~~ 76 (280)
T 3kh5_A 4 RVMKIAQN-KKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSK------YNLIREKHER 76 (280)
T ss_dssp BGGGTSCC-SCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGG------GHHHHTTSTT
T ss_pred hHHHHhcC-CCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccch------hhhhhhcccc
Confidence 34555554 3799999999999999999999999999999866789999999999986531110 0001100000
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhh
Q 016866 134 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 213 (381)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~ 213 (381)
.+... ....++.+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++..
T Consensus 77 ~~~~~--------~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~ 142 (280)
T 3kh5_A 77 NFLAA--------INEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND---EN---QLISLITERDVIRALLD 142 (280)
T ss_dssp CHHHH--------TTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHGG
T ss_pred chhHH--------hhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC---CC---EEEEEEEHHHHHHHHhh
Confidence 00000 011123478889999999999999999999999999999976 57 89999999999997754
Q ss_pred hcccCCCCCccccCccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHH
Q 016866 214 HFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 293 (381)
Q Consensus 214 ~~~~~~~~~~~~~~~i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~ 293 (381)
.... . ..++++|.+++.++.+++++.++++.|.+++++++||+ ++|+++|++|.+|+++
T Consensus 143 ~~~~--------~------------~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~ 201 (280)
T 3kh5_A 143 KIDE--------N------------EVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIK 201 (280)
T ss_dssp GSCT--------T------------CBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHH
T ss_pred cCCC--------C------------CCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHH
Confidence 3211 1 13455688889999999999999999999999999999 5899999999999998
Q ss_pred HHhhhhh-cccc------cccccHHHHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEE
Q 016866 294 LAKDKAY-AQIH------LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVE 366 (381)
Q Consensus 294 l~~~~~~-~~~~------~~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~li 366 (381)
....+.. .... ..+.++.+ +|..++.+|++++++.+|++.|.+++++++||+| ++|+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~ 267 (280)
T 3kh5_A 202 LLGSDWAFNHMQTGNVREITNVRMEE-------------IMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVD-ENLRIK 267 (280)
T ss_dssp HHTSHHHHHHHHSCCTHHHHHCBHHH-------------HSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEEC-TTCBEE
T ss_pred HHhhhhhhhhhcccchhhhhCCcHHH-------------HhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEEC-CCCeEE
Confidence 7653221 1000 01234444 6777899999999999999999999999999999 468999
Q ss_pred EEEehHHHHHHhh
Q 016866 367 GIISLSDVFRFLL 379 (381)
Q Consensus 367 GiIs~~DIl~~l~ 379 (381)
|+||.+||++++.
T Consensus 268 Givt~~dil~~la 280 (280)
T 3kh5_A 268 GIITEKDVLKYFA 280 (280)
T ss_dssp EEEEHHHHGGGGC
T ss_pred EEEeHHHHHHhhC
Confidence 9999999999873
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=100.00 E-value=4.4e-33 Score=260.36 Aligned_cols=264 Identities=10% Similarity=0.098 Sum_probs=209.8
Q ss_pred hCcccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCcEEEEeehHHHHHHHHHhccCCCCCChhHHhhcc
Q 016866 52 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 131 (381)
Q Consensus 52 ~~~~~d~~p~s~~vi~ld~~~~v~~A~~~l~~~~i~~~pV~d~~~~~~vGilt~~D~~~il~~~~~~~~~~~~~~l~~~~ 131 (381)
..++.|+|. .++++++++.|+.+|++.|.+++++++||+| ++++|++|..|++..+...... ...
T Consensus 19 ~~~V~dim~--~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~----------~~~ 83 (296)
T 3ddj_A 19 GMNIETLMI--KNPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKD----------SCS 83 (296)
T ss_dssp CSSGGGTCE--ESCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC-------------CC
T ss_pred ccCHHHhcc--CCCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccc----------ccc
Confidence 356778874 4799999999999999999999999999998 6699999999998765311100 001
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHH
Q 016866 132 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 211 (381)
Q Consensus 132 i~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l 211 (381)
...+.... ...++.+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++
T Consensus 84 ~~~~~~~~--------~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~lvGivt~~dl~~~~ 149 (296)
T 3ddj_A 84 QGDLYHIS--------TTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDI---ND---KPVGIVTEREFLLLY 149 (296)
T ss_dssp HHHHHHHH--------TSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHGGGG
T ss_pred chhhHHHh--------cccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHhh
Confidence 11111110 01123478889999999999999999999999999999975 56 899999999999866
Q ss_pred hhhcccCCCCCccccCccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHH
Q 016866 212 CRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDI 291 (381)
Q Consensus 212 ~~~~~~~~~~~~~~~~~i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di 291 (381)
..... . ..++++|.+++.++.+++++.++++.|.+++++++||+|++|+++|++|.+|+
T Consensus 150 ~~~~~---------~------------~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl 208 (296)
T 3ddj_A 150 KDLDE---------I------------FPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNA 208 (296)
T ss_dssp GGSCC---------C------------CBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred hcccc---------c------------ccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHH
Confidence 43211 1 24456688899999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccc---ccccccHHHHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEE
Q 016866 292 TALAKDKAYAQI---HLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGI 368 (381)
Q Consensus 292 ~~l~~~~~~~~~---~~~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGi 368 (381)
++.+..... .+ ...+.++.+ +|..++.+|.+++++.+|++.|.+++++++||+| ++|+++|+
T Consensus 209 ~~~~~~~~~-~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Gi 273 (296)
T 3ddj_A 209 IKQLAKAVD-KLDPDYFYGKVVKD-------------VMVTNLVTIDELASVNRAAAEMIVKRIGSLLILN-KDNTIRGI 273 (296)
T ss_dssp HHHHHHHHH-HTCTHHHHTCBHHH-------------HSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEE
T ss_pred HHHHHHHHh-hcChhhhcCcCHHH-------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEE
Confidence 987653211 11 011345555 6777899999999999999999999999999999 47999999
Q ss_pred EehHHHHHHhhc
Q 016866 369 ISLSDVFRFLLG 380 (381)
Q Consensus 369 Is~~DIl~~l~~ 380 (381)
||.+||++++.+
T Consensus 274 it~~Dil~~l~~ 285 (296)
T 3ddj_A 274 ITERDLLIALHH 285 (296)
T ss_dssp EEHHHHHHHHHH
T ss_pred EcHHHHHHHHHH
Confidence 999999999863
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=1.1e-30 Score=242.05 Aligned_cols=257 Identities=16% Similarity=0.224 Sum_probs=180.0
Q ss_pred ccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCcEEEEeehHHHHHHHHHhccCCCCCChhHHhhccHHHHHHHHHhh
Q 016866 63 GKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQL 142 (381)
Q Consensus 63 ~~vi~ld~~~~v~~A~~~l~~~~i~~~pV~d~~~~~~vGilt~~D~~~il~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~ 142 (381)
.++++++++.|+.+|++.|.++++.++||+|++ ++++|++|..|++..+. .. .
T Consensus 9 ~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~-------~~--------~----------- 61 (282)
T 2yzq_A 9 QNPVTITLPATRNYALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD-------EE--------Q----------- 61 (282)
T ss_dssp ESCCCEESSCC------------CCEEEEECTT-CCEEEEEESSCC----------------------------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc-------cC--------C-----------
Confidence 468889999999999999999999999999974 66999999999874321 00 0
Q ss_pred hccccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHH-HHhhhcccCCCC
Q 016866 143 NLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICRHFKHSSSS 221 (381)
Q Consensus 143 ~~~~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~-~l~~~~~~~~~~ 221 (381)
++.+|..+++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++ ++....
T Consensus 62 --------v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~di~~~~~~~~~------ 121 (282)
T 2yzq_A 62 --------LAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS---KG---KPVGILTVGDIIRRYFAKSE------ 121 (282)
T ss_dssp ----------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTCS------
T ss_pred --------HHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHhccC------
Confidence 11256777899999999999999999999999999976 46 7999999999998 664320
Q ss_pred CccccCccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHH------HHH
Q 016866 222 LPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT------ALA 295 (381)
Q Consensus 222 ~~~~~~~i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~------~l~ 295 (381)
.... ..++++|.++++++.+++++.++++.|.+++++++||+|++|+++|++|.+|++ +..
T Consensus 122 -~~~~------------~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~ 188 (282)
T 2yzq_A 122 -KYKG------------VEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIM 188 (282)
T ss_dssp -GGGG------------CBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--
T ss_pred -Cccc------------CcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhh
Confidence 0011 234556888899999999999999999999999999999889999999999998 322
Q ss_pred hhhh--hcc-ccccc-ccHHHHHhc--CCCCCCCcc-cCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEE
Q 016866 296 KDKA--YAQ-IHLDE-MNIHQALQL--GQDANPSLG-FNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGI 368 (381)
Q Consensus 296 ~~~~--~~~-~~~~~-~~v~~~l~~--~~~~~~~~~-~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGi 368 (381)
.... ... ..+.. .....+... ......+.+ +|++++.+|.+++++.+|++.|.+++++++||+| ++|+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~lvGi 267 (282)
T 2yzq_A 189 KSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIR-GEGDLIGL 267 (282)
T ss_dssp ------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTTEEEEE
T ss_pred ccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEEC-CCCCEEEE
Confidence 1000 000 00000 000000000 000122333 8989999999999999999999999999999999 46899999
Q ss_pred EehHHHHHHhhc
Q 016866 369 ISLSDVFRFLLG 380 (381)
Q Consensus 369 Is~~DIl~~l~~ 380 (381)
||.+||++++..
T Consensus 268 it~~Dil~~~~~ 279 (282)
T 2yzq_A 268 IRDFDLLKVLVK 279 (282)
T ss_dssp EEHHHHGGGGCC
T ss_pred EeHHHHHHHHHh
Confidence 999999998753
No 7
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.92 E-value=5e-24 Score=196.70 Aligned_cols=195 Identities=18% Similarity=0.330 Sum_probs=157.7
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccC-ccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ-PVSSI 232 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~-~i~~l 232 (381)
+|.++++++++++|+.+|++.|.+++++++||+++ .+| +++|++|.+|+++++...... ..+.. ....+
T Consensus 9 i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~--~~~---~~~Givt~~di~~~~~~~~~~-----~~~~~~~~~~~ 78 (280)
T 3kh5_A 9 AQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNA--GNN---KVVGIITSMDIVDFMGGGSKY-----NLIREKHERNF 78 (280)
T ss_dssp SCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECT--TTC---BEEEEEEHHHHHHHTTTSGGG-----HHHHTTSTTCH
T ss_pred hcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEEC--CCC---eEEEEEEHHHHHHHhcccchh-----hhhhhccccch
Confidence 67889999999999999999999999999999963 246 899999999999977432211 00100 00111
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHH
Q 016866 233 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 312 (381)
Q Consensus 233 ~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~ 312 (381)
.......++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++........ +.++.+
T Consensus 79 -~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~v~~ 152 (280)
T 3kh5_A 79 -LAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDE-----NEVIDD 152 (280)
T ss_dssp -HHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCT-----TCBSGG
T ss_pred -hHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCC-----CCCHHH
Confidence 11123467788999999999999999999999999999999999999999999999999876533221 124444
Q ss_pred HHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 313 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 313 ~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.+++.++++++++.++++.|.+++++++||++ +|+++|+||..|+++++.
T Consensus 153 -------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~--~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 153 -------------YITRDVIVATPGERLKDVARTMVRNGFRRLPVVS--EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp -------------GCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHT
T ss_pred -------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHh
Confidence 7777899999999999999999999999999996 489999999999999874
No 8
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.90 E-value=8.8e-24 Score=197.16 Aligned_cols=191 Identities=18% Similarity=0.220 Sum_probs=157.3
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccc
Q 016866 152 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 152 g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
+.+|..+++++++++++.+|++.|.+++++++||++ | +++|++|..||++++...... ....+.
T Consensus 23 ~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-----~---~l~GivT~~Di~~~~~~~~~~--------~~~~~~ 86 (296)
T 3ddj_A 23 ETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-----E---KIEGLLTTRDLLSTVESYCKD--------SCSQGD 86 (296)
T ss_dssp GGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-----S---SEEEEEEHHHHHGGGTTCC-----------CCHHH
T ss_pred HHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-----C---eEEEEEeHHHHHHHhcccccc--------cccchh
Confidence 347888999999999999999999999999999994 5 899999999999977532211 011111
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHH
Q 016866 232 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIH 311 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~ 311 (381)
+ +.....+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++...... ...++.
T Consensus 87 ~-~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~------~~~~v~ 159 (296)
T 3ddj_A 87 L-YHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLD------EIFPVK 159 (296)
T ss_dssp H-HHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSC------CCCBHH
T ss_pred h-HHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhccc------ccccHH
Confidence 1 001123567779889999999999999999999999999999999999999999999988654221 134676
Q ss_pred HHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 312 QALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 312 ~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+ +|.+++.++.+++++.++++.|.+++++++||+| ++|+++|+||..|+++++.
T Consensus 160 ~-------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 160 V-------------FMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVID-DDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp H-------------HSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred H-------------hhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 6 6667899999999999999999999999999999 4799999999999998864
No 9
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.88 E-value=6.3e-22 Score=186.83 Aligned_cols=200 Identities=17% Similarity=0.262 Sum_probs=152.1
Q ss_pred CCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccccc
Q 016866 156 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 235 (381)
Q Consensus 156 ~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig 235 (381)
..+++.+++++++.+|++.|.+++++++||+++ +.+ +++|++|..|++.++...+.... ....+......
T Consensus 39 ~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~--~~~---~lvGilt~~Dl~~~l~~~~~~~~-----~~~~l~~~~~~ 108 (323)
T 3t4n_C 39 SYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDS--KTS---RFAGLLTTTDFINVIQYYFSNPD-----KFELVDKLQLD 108 (323)
T ss_dssp EEEEEEEETTSBHHHHHHHHHHTTCSCEEEEET--TTT---EEEEEECHHHHHHHHHHHHHCGG-----GGGGGGGCBHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeC--CCC---eEEEEEEHHHHHHHHHHHHcCcc-----hhHHHHHHHHH
Confidence 356889999999999999999999999999975 345 79999999999998765432210 00111111111
Q ss_pred ccc--cccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCc-----EEEEEeHHHHHHHHhhhhhcccccccc
Q 016866 236 TWV--PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDS-----LLDIYSRSDITALAKDKAYAQIHLDEM 308 (381)
Q Consensus 236 ~~~--~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~-----lvGiis~~Di~~l~~~~~~~~~~~~~~ 308 (381)
.+. ..+.++|.++++++.+++++.+|++.|.+++++++||+|+++. ++|++|.+|+++.+...... ..+.+.
T Consensus 109 ~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-~~~~~~ 187 (323)
T 3t4n_C 109 GLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-THFLKI 187 (323)
T ss_dssp HHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG-GGGCCS
T ss_pred HHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc-hhhhhC
Confidence 111 1234556788999999999999999999999999999998775 99999999999876532211 112234
Q ss_pred cHHHHHhcCCCCCCCccc---CCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 309 NIHQALQLGQDANPSLGF---NGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 309 ~v~~~l~~~~~~~~~~~~---m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
++.+ + |..++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+|+++++.+
T Consensus 188 ~v~~-------------~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd-~~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 188 PIGD-------------LNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID-ENGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp BGGG-------------TTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEETTHHHHHHHT
T ss_pred cHHH-------------cCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEeHHHHHHHHhh
Confidence 5544 4 777899999999999999999999999999999 47999999999999998753
No 10
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.88 E-value=3e-22 Score=189.69 Aligned_cols=205 Identities=18% Similarity=0.253 Sum_probs=159.8
Q ss_pred CC--CCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccc
Q 016866 154 PC--PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 154 ~~--~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
+| ..+++++++++++.+|++.|.+++++++||++++ .+ +++|++|.+|++.++...+.... .....+..
T Consensus 40 im~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~--~~---~~vGivt~~Dll~~l~~~~~~~~----~~~~~l~~ 110 (330)
T 2v8q_E 40 LIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSK--KQ---SFVGMLTITDFINILHRYYKSAL----VQIYELEE 110 (330)
T ss_dssp GSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETT--TT---EEEEEEEHHHHHHHHHHHHHHHT----TTCCCGGG
T ss_pred hccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCC--CC---eEEEEEEHHHHHHHHHHHHhccc----cchhHHhh
Confidence 67 7789999999999999999999999999999762 25 79999999999998765431100 00111222
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcC-CCcEEEEEeHHHHHHHHhhhhhc--ccccccc
Q 016866 232 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD-NDSLLDIYSRSDITALAKDKAYA--QIHLDEM 308 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGiis~~Di~~l~~~~~~~--~~~~~~~ 308 (381)
..+..|...++++|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|++|.+|+++........ ...+...
T Consensus 111 ~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 190 (330)
T 2v8q_E 111 HKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSK 190 (330)
T ss_dssp CBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGGS
T ss_pred ccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhcC
Confidence 33444444567789999999999999999999999999999999998 89999999999999876532110 0001123
Q ss_pred cHHHHHhcCCCCCCCcccCC-CcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 309 NIHQALQLGQDANPSLGFNG-QRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 309 ~v~~~l~~~~~~~~~~~~m~-~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
++.+. .+|. .++.++.+++++.++++.|.+++++++||+|+ +|+++|+||..|+++++.
T Consensus 191 ~v~~~-----------~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~~~l~Giit~~dl~~~~~ 250 (330)
T 2v8q_E 191 SLEEL-----------QIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAA 250 (330)
T ss_dssp BHHHH-----------TCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECT-TSBEEEEEEGGGTGGGGG
T ss_pred CHHHh-----------cccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECC-CCcEEEEEEHHHHHHHHh
Confidence 34331 1344 57889999999999999999999999999994 799999999999998765
No 11
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.86 E-value=1.4e-21 Score=180.64 Aligned_cols=173 Identities=16% Similarity=0.232 Sum_probs=131.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
+|.++++++++++++.+|+++|.+++++++||+++ +| +++|+++..|++..+. .
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~---~~---~~~Giv~~~dl~~~~~-------------~------- 59 (282)
T 2yzq_A 6 IMTQNPVTITLPATRNYALELFKKYKVRSFPVVNK---EG---KLVGIISVKRILVNPD-------------E------- 59 (282)
T ss_dssp HSEESCCCEESSCC------------CCEEEEECT---TC---CEEEEEESSCC--------------------------
T ss_pred hccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC---CC---cEEEEEEHHHHHhhhc-------------c-------
Confidence 56778999999999999999999999999999975 56 8999999999986321 1
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHH-HHhhhhhcccccccccHHH
Q 016866 234 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQ 312 (381)
Q Consensus 234 ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~-l~~~~~~~~~~~~~~~v~~ 312 (381)
..++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|++|.+|+++ ....+.. . .+.++.+
T Consensus 60 -----~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~-~---~~~~v~~ 130 (282)
T 2yzq_A 60 -----EQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEK-Y---KGVEIEP 130 (282)
T ss_dssp ---------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSG-G---GGCBSTT
T ss_pred -----CCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCC-c---ccCcHHH
Confidence 1344557778899999999999999999999999999998899999999999998 6553210 0 0233333
Q ss_pred HHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHH
Q 016866 313 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVF 375 (381)
Q Consensus 313 ~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl 375 (381)
+|..++.++.+++++.++++.|.+++++++||+|+ +|+++|+||..|++
T Consensus 131 -------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 131 -------------YYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDS-EGNLVGIVDETDLL 179 (282)
T ss_dssp -------------TSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECT-TSCEEEEEEGGGGG
T ss_pred -------------HhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHh
Confidence 77778999999999999999999999999999994 68999999999998
No 12
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.86 E-value=4.9e-21 Score=181.56 Aligned_cols=207 Identities=14% Similarity=0.147 Sum_probs=152.6
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccc
Q 016866 154 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 154 ~~~--~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
+|. .+++++++++++.+|++.|.+++++++||+++ +.+ +++|+++.+|++.++......... .. ....+..
T Consensus 27 im~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~--~~~---~~vGiv~~~Dl~~~~~~~~~~~~~-~~-~~~~~~~ 99 (334)
T 2qrd_G 27 VLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDS--EAN---KFAGLLTMADFVNVIKYYYQSSSF-PE-AIAEIDK 99 (334)
T ss_dssp GSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEET--TTT---EEEEEECHHHHHHHHHHHHHHCSC-GG-GGGGGGS
T ss_pred hCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHhhccCC-cc-HHHHHhh
Confidence 564 35789999999999999999999999999975 236 899999999999987543211000 00 0001112
Q ss_pred ccccccccccccccCCCc--eEecCCCCHHHHHHHHHhCCCcEEEEEcCCC-c----EEEEEeHHHHHHHHhhhhhcccc
Q 016866 232 IQLGTWVPRIGEANGRPF--AMLRPTASLGSALALLVQADVSSIPIVDDND-S----LLDIYSRSDITALAKDKAYAQIH 304 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~--~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~----lvGiis~~Di~~l~~~~~~~~~~ 304 (381)
.++..+....+++|..++ +++.+++++.++++.|.+++++++||+|++| + ++|++|.+|+++....+... ..
T Consensus 100 ~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~-~~ 178 (334)
T 2qrd_G 100 FRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE-TA 178 (334)
T ss_dssp CBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGG-GG
T ss_pred hchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccc-hh
Confidence 222222222234455666 8999999999999999999999999999765 4 99999999999866532211 11
Q ss_pred cccccHHHHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 305 LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 305 ~~~~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+...++.+.. .+|..++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||..|+++++.
T Consensus 179 ~~~~~v~~l~----------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 179 MLRVPLNQMT----------IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNS-EGTLLNVYESVDVMHLIQ 242 (334)
T ss_dssp GCCCBGGGSS----------CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEETHHHHHHHT
T ss_pred hhhCcHHHhC----------CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcC-CCcEEEEEEHHHHHHHhh
Confidence 1123443310 037778999999999999999999999999999994 689999999999999875
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.84 E-value=4.1e-21 Score=164.54 Aligned_cols=137 Identities=16% Similarity=0.273 Sum_probs=105.3
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcc-ccc--ccccH---HHH
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ-IHL--DEMNI---HQA 313 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~-~~~--~~~~v---~~~ 313 (381)
.++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++......... ..+ ..... ...
T Consensus 19 ~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
T 4esy_A 19 PIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHL 98 (170)
T ss_dssp BGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHH
T ss_pred CHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhh
Confidence 456779999999999999999999999999999999999999999999999987433111000 000 00000 000
Q ss_pred HhcCCCCCCCcc-cCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 314 LQLGQDANPSLG-FNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 314 l~~~~~~~~~~~-~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
... ....+.+ +|++++++|++++++.+|++.|.+++++++||+| +|+++|+||.+||+++|+.
T Consensus 99 ~~~--~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd--~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 99 FET--GRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ--DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHH--HTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHTTTSCC
T ss_pred hcc--ccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE--CCEEEEEEEHHHHHHHHHh
Confidence 000 0011222 8999999999999999999999999999999999 3899999999999999864
No 14
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.80 E-value=5.1e-19 Score=147.71 Aligned_cols=119 Identities=16% Similarity=0.305 Sum_probs=106.0
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCC-CcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++....+. +.++.+
T Consensus 24 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 92 (148)
T 3lv9_A 24 KIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-------KIELEE---- 92 (148)
T ss_dssp BGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------CCCGGG----
T ss_pred CHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------CccHHH----
Confidence 56777987 89999999999999999999999999999987 89999999999998654331 245555
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+| +++.++++++++.+|++.|.+++++++||+| ++|+++|+||..||++++++
T Consensus 93 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 93 ---------IL-RDIIYISENLTIDKALERIRKEKLQLAIVVD-EYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp ---------TC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC-TTSSEEEEEEHHHHHHHHHH
T ss_pred ---------hc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 77 7899999999999999999999999999999 47999999999999999976
No 15
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.80 E-value=1.9e-19 Score=152.09 Aligned_cols=122 Identities=18% Similarity=0.276 Sum_probs=100.9
Q ss_pred ccccC--CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCC
Q 016866 242 GEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 319 (381)
Q Consensus 242 ~~~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~ 319 (381)
.++|. .++.++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++...........+.+.++.+
T Consensus 18 ~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~------- 90 (156)
T 3k6e_A 18 ETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH------- 90 (156)
T ss_dssp GGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG-------
T ss_pred HHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHH-------
Confidence 34464 478999999999999999999999999999999999999999999986654332222222344444
Q ss_pred CCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 320 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 320 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.+++.++++++++.+|++.|.++++ +|||| ++|+++|+||.+||++++.
T Consensus 91 ------im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd-~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 91 ------MTKTDVAVVSPDFTITEVLHKLVDESF--LPVVD-AEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp ------TCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------hhcCCceecccccHHHHHHHHHHHcCC--eEEEe-cCCEEEEEEEHHHHHHHHH
Confidence 888899999999999999999998764 99999 5799999999999999884
No 16
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.79 E-value=5.7e-19 Score=144.14 Aligned_cols=120 Identities=15% Similarity=0.281 Sum_probs=104.8
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCC-CcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++....+. .+.++.+
T Consensus 7 ~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~------~~~~v~~---- 76 (130)
T 3i8n_A 7 PVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS------GQKQLGA---- 76 (130)
T ss_dssp CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT------TTSBHHH----
T ss_pred CHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC------CcCCHHH----
Confidence 4667788 456789999999999999999999999999987 89999999999998765332 1356766
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+| +++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++++
T Consensus 77 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 77 ---------VM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVD-EYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ---------HS-EECCEEETTSCHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHHHHHT
T ss_pred ---------Hh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEc-CCCCEEEEEEHHHHHHHHcC
Confidence 56 4688999999999999999999999999999 47999999999999999986
No 17
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.78 E-value=3.6e-19 Score=144.74 Aligned_cols=120 Identities=13% Similarity=0.369 Sum_probs=102.3
Q ss_pred ccccccCCC--ceEecCCCCHHHHHHHHHhCCCcEEEEEcCC-CcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANGRP--FAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|.++ ++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++...... .+.++.+
T Consensus 4 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~------~~~~v~~---- 73 (127)
T 3nqr_A 4 RVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA------EAFSMDK---- 73 (127)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC------CCCCHHH----
T ss_pred CHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC------CCCCHHH----
Confidence 456778854 8999999999999999999999999999987 89999999999988554221 1356766
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|. ++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++++
T Consensus 74 ---------~m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 74 ---------VLR-TAVVVPESKRVDRMLKEFRSQRYHMAIVID-EFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp ---------HCB-CCCEEETTCBHHHHHHHHHHTTCCEEEEEC-TTSCEEEEEEHHHHHHHC--
T ss_pred ---------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 553 477999999999999999999999999999 47999999999999999876
No 18
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.78 E-value=1e-18 Score=140.65 Aligned_cols=119 Identities=19% Similarity=0.372 Sum_probs=105.4
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCC
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 319 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~ 319 (381)
+++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|+++.+|+.+....+ ..++.+
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~--------~~~v~~------- 66 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN--------KKTIEE------- 66 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT--------CCBGGG-------
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc--------ccCHHH-------
Confidence 45677999999999999999999999999999999999999999999999999866532 124554
Q ss_pred CCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 320 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 320 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|.+++.++.+++++.++++.|.+++.+++||+| ++|+++|+||..||++++.+
T Consensus 67 ------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 67 ------IMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVD-DYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp ------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHC-
T ss_pred ------HhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEEC-CCCCEEEEEeHHHHHHHhhc
Confidence 6777889999999999999999999999999999 47999999999999999864
No 19
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.78 E-value=9.8e-19 Score=142.89 Aligned_cols=122 Identities=11% Similarity=0.190 Sum_probs=103.6
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCcEEEEEcC-CCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDD-NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|. .+++++.+++++.+|++.|.+++++++||+++ +|+++|++|.+|+++....+.. +...++.+
T Consensus 3 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~----~~~~~v~~---- 74 (130)
T 3hf7_A 3 SVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE----FTKEIMLR---- 74 (130)
T ss_dssp BHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC----CCHHHHHH----
T ss_pred CHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc----cchhhHHH----
Confidence 4566785 46889999999999999999999999999975 6899999999999987654321 11234555
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+| +++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++++
T Consensus 75 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 75 ---------AA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVD-EYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp ---------HS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEEC-TTSCEEEEEEHHHHHHHHHC
T ss_pred ---------hc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEc-CCCCEEEEeeHHHHHHHHhC
Confidence 55 4688999999999999999999999999999 47999999999999999986
No 20
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.78 E-value=2.4e-18 Score=147.58 Aligned_cols=119 Identities=18% Similarity=0.329 Sum_probs=105.9
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCC-CcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++....+. +.++.+
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 111 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE-------RLELVD---- 111 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-------CCCGGG----
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-------cccHHH----
Confidence 5677788 678999999999999999999999999999987 99999999999998665331 245555
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+| ++++++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++++
T Consensus 112 ---------im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 112 ---------LV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD-EYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp ---------GC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHT
T ss_pred ---------Hh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe-CCCCEEEEeeHHHHHHHHhC
Confidence 77 7899999999999999999999999999999 47999999999999999875
No 21
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.77 E-value=2e-18 Score=142.86 Aligned_cols=124 Identities=17% Similarity=0.204 Sum_probs=105.3
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCC--cEEEEEeHHHHHHHHhhhhhcccccccccHHHH
Q 016866 236 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND--SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 313 (381)
Q Consensus 236 ~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g--~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~ 313 (381)
.+..+++++|.+++.++.+++++.+|++.|.+++++++||+|++| +++|++|.+|+++....+.. .+.++.+
T Consensus 2 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~- 75 (141)
T 2rih_A 2 AMAIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLD-----LDGPAMP- 75 (141)
T ss_dssp ---CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCC-----TTSBSGG-
T ss_pred CcceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCC-----CCCCHHH-
Confidence 344567888999999999999999999999999999999999888 99999999999986553211 0234444
Q ss_pred HhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 314 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 314 l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|..++.++.++ ++.+|++.|.+++++++||+| ++|+++|+||.+||++++.
T Consensus 76 ------------~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 76 ------------IANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVN-KNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp ------------GCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHSCHH
T ss_pred ------------HcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEc-CCCcEEEEEEHHHHHHHHH
Confidence 777789999999 999999999999999999999 4799999999999987654
No 22
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.77 E-value=9.9e-19 Score=142.59 Aligned_cols=118 Identities=14% Similarity=0.325 Sum_probs=101.8
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCC-CcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++..... +.++.+
T Consensus 6 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--------~~~v~~---- 73 (129)
T 3jtf_A 6 TVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP--------ALDIRS---- 73 (129)
T ss_dssp BHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT--------TSCGGG----
T ss_pred CHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC--------CcCHHH----
Confidence 5667787 678899999999999999999999999999985 8999999999998754321 244554
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|. ++.++.+++++.+|++.|.+++.+++||+| ++|+++|+||.+||++++++
T Consensus 74 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd-~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 74 ---------LVR-PAVFIPEVKRLNVLLREFRASRNHLAIVID-EHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp ---------GCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEEC-C-CCEEEEEEHHHHHHHHHH
T ss_pred ---------HhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 553 578999999999999999999999999999 47999999999999999975
No 23
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.77 E-value=5.4e-18 Score=136.89 Aligned_cols=121 Identities=19% Similarity=0.243 Sum_probs=105.2
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCC
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 319 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~ 319 (381)
+++++|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|+++.+|+.+....+.. ..+.++.+
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~----~~~~~v~~------- 69 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDD----LAEVKVWE------- 69 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCC----TTTSBHHH-------
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCc----ccccCHHH-------
Confidence 35677888999999999999999999999999999999 8999999999999986553321 11356766
Q ss_pred CCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 320 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 320 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|.+++.++.+++++.++++.|.+++++++||+| + |+++|+||.+|+++++.+
T Consensus 70 ------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 70 ------VMERDLVTISPRATIKEAAEKMVKNVVWRLLVEE-D-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp ------HCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHC-
T ss_pred ------HcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 6667899999999999999999999999999999 4 899999999999998864
No 24
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.76 E-value=8.1e-19 Score=144.50 Aligned_cols=121 Identities=14% Similarity=0.289 Sum_probs=101.9
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCC-CcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|. .++.++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|+++....+.. .+.++.+
T Consensus 4 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~-----~~~~v~~---- 74 (136)
T 3lfr_A 4 QVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADG-----DSDDVKK---- 74 (136)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSG-----GGCCGGG----
T ss_pred ChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccC-----CCcCHHH----
Confidence 4566787 568999999999999999999999999999987 899999999999986542111 1244554
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|. ++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++++
T Consensus 75 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 75 ---------LLR-PATFVPESKRLNVLLREFRANHNHMAIVID-EYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp ---------TCB-CCCEEETTCBHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHTTC--
T ss_pred ---------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 674 488999999999999999999999999999 47999999999999998875
No 25
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.76 E-value=2.5e-18 Score=144.48 Aligned_cols=119 Identities=18% Similarity=0.289 Sum_probs=104.5
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEE-cC-CCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHh
Q 016866 240 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIV-DD-NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 315 (381)
Q Consensus 240 ~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~-~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~ 315 (381)
+++++|.+ +++++.+++++.+|++.|.+++++++||+ |+ +|+++|++|.+|+++....+. +.++.+
T Consensus 21 ~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~--- 90 (153)
T 3oco_A 21 VASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD-------KAKIST--- 90 (153)
T ss_dssp BHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT-------TSBGGG---
T ss_pred EeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC-------CCcHHH---
Confidence 45667875 78999999999999999999999999999 65 489999999999998655331 245555
Q ss_pred cCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 316 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 316 ~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+| +++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++++
T Consensus 91 ----------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 91 ----------IM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID-EYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp ----------TC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC-TTSCEEEEECHHHHHHHHHC
T ss_pred ----------Hh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe-CCCCEEEEeeHHHHHHHHhc
Confidence 77 7899999999999999999999999999999 47999999999999999875
No 26
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.76 E-value=4.9e-18 Score=142.43 Aligned_cols=123 Identities=34% Similarity=0.583 Sum_probs=100.5
Q ss_pred CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCCCCccc
Q 016866 247 RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGF 326 (381)
Q Consensus 247 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~ 326 (381)
+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....+.+... +.++.+++.... .
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~---~~~v~~~m~~~~-------~ 98 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNL---DVSVTKALQHRS-------H 98 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCT---TSBGGGGGGTCC-------H
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhh---cchHHHHHhhhh-------c
Confidence 478899999999999999999999999999989999999999999986654322111 345555332100 1
Q ss_pred CCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 327 NGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 327 m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
|..++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||..||++++..
T Consensus 99 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 99 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp HHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHC-
T ss_pred ccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC-CCeEEEEEEHHHHHHHHHh
Confidence 2257899999999999999999999999999994 7999999999999999864
No 27
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.76 E-value=9e-18 Score=138.10 Aligned_cols=122 Identities=19% Similarity=0.357 Sum_probs=105.6
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHH-HHHHhhhhhcccccccccHHHHHhcCC
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDI-TALAKDKAYAQIHLDEMNIHQALQLGQ 318 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di-~~l~~~~~~~~~~~~~~~v~~~l~~~~ 318 (381)
+++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|+++.+|+ .+....+.. .+.++.+
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~~v~~------ 77 (138)
T 2p9m_A 9 KVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYT-----LETTIGD------ 77 (138)
T ss_dssp BGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCC-----SSCBHHH------
T ss_pred CHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhccc-----CCcCHHH------
Confidence 5667798899999999999999999999999999999988999999999999 876543221 1356666
Q ss_pred CCCCCcccCCCcceEEcCCCCHHHHHHHHHhCC-----CCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 319 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPG-----VRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 319 ~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~-----~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|.+++.++.+++++.++++.|.+++ ++++||+|+ +|+++|+||..|+++++..
T Consensus 78 -------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 78 -------VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK-NNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp -------HSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT-TSBEEEEEEHHHHHHHHHH
T ss_pred -------HhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC-CCeEEEEEEHHHHHHHHHh
Confidence 67778899999999999999999999 999999994 7999999999999998854
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.76 E-value=1.8e-18 Score=140.78 Aligned_cols=121 Identities=13% Similarity=0.166 Sum_probs=104.8
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCC
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 319 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~ 319 (381)
+++++|.+++.++.+++++.+|++.|.+++++++||+|+ |+++|++|.+|+.+...++... +.++.+
T Consensus 6 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~~-----~~~v~~------- 72 (128)
T 3gby_A 6 TFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPTV-----KEKLGE------- 72 (128)
T ss_dssp BGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCCT-----TCBCCG-------
T ss_pred EHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCcc-----cCcHHH-------
Confidence 567789999999999999999999999999999999998 9999999999999754422110 123333
Q ss_pred CCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 320 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 320 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|.+++.++.+++++.++++.|.+++.+++||+| ++|+++|+||..|+++++..
T Consensus 73 ------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 73 ------ELLETVRSYRPGEQLFDNLISVAAAKCSVVPLAD-EDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ------GGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEEC-TTCBEEEEEEHHHHHHHHHT
T ss_pred ------HccCCCcEECCCCCHHHHHHHHHhCCCcEEEEEC-CCCCEEEEEEHHHHHHHHHh
Confidence 7777899999999999999999999999999999 47999999999999999864
No 29
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.76 E-value=3.9e-18 Score=142.40 Aligned_cols=127 Identities=22% Similarity=0.350 Sum_probs=103.9
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcc---------cccccc
Q 016866 240 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ---------IHLDEM 308 (381)
Q Consensus 240 ~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~---------~~~~~~ 308 (381)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.+........ ....+.
T Consensus 6 ~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
T 4gqw_A 6 TVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGK 85 (152)
T ss_dssp BGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CC
T ss_pred EhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccc
Confidence 56777887 8999999999999999999999999999999899999999999986432110000 000123
Q ss_pred cHHHHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 309 NIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 309 ~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
++.+ +|..+++++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 86 ~v~~-------------~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 86 LVGD-------------LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD-SDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp BHHH-------------HSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC-TTSBEEEEEEHHHHHHHHHC
T ss_pred cHHH-------------hcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCcEEEEEEHHHHHHHHHh
Confidence 4444 6777888999999999999999999999999999 47999999999999999865
No 30
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.76 E-value=7.4e-18 Score=137.77 Aligned_cols=120 Identities=18% Similarity=0.258 Sum_probs=104.9
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCC
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 319 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~ 319 (381)
+++++|.+++.++.+++++.+|++.|.+++++++||+| +|+++|+++.+|+.++...+.. .+.++.+
T Consensus 5 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~------- 71 (133)
T 2ef7_A 5 IVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKS-----LETKAEE------- 71 (133)
T ss_dssp BGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC-----TTCBGGG-------
T ss_pred cHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCC-----cccCHHH-------
Confidence 56777988999999999999999999999999999999 8999999999999886653311 1244554
Q ss_pred CCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 320 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 320 ~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.+++.++.+++++.++++.|.+++.+++||+| ++|+++|+||..||++++.
T Consensus 72 ------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 72 ------FMTASLITIREDSPITGALALMRQFNIRHLPVVD-DKGNLKGIISIRDITRAID 124 (133)
T ss_dssp ------TSEECCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred ------HcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHHHH
Confidence 6777889999999999999999999999999999 4799999999999999875
No 31
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.76 E-value=1e-17 Score=137.84 Aligned_cols=121 Identities=18% Similarity=0.359 Sum_probs=104.6
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHH-HHhhhhhcccccccccHHHHHhcCC
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQLGQ 318 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~-l~~~~~~~~~~~~~~~v~~~l~~~~ 318 (381)
+++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++ +...+. ..+.++.+
T Consensus 8 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~~v~~------ 76 (138)
T 2yzi_A 8 PIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-----PYDIPVER------ 76 (138)
T ss_dssp BGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-----CTTSBGGG------
T ss_pred hHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-----cccCCHHH------
Confidence 566779889999999999999999999999999999998899999999999974 433221 11245554
Q ss_pred CCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 319 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 319 ~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|..++.++.+++++.+|++.|.+++++++ |+|+ +|+++|+||..||++++.+
T Consensus 77 -------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~-~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 77 -------IMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE-EGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp -------TCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred -------HhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC-CCCEEEEEEHHHHHHHHHH
Confidence 777789999999999999999999999999 9994 6999999999999998864
No 32
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.75 E-value=9.6e-18 Score=141.98 Aligned_cols=125 Identities=22% Similarity=0.228 Sum_probs=105.2
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcc----cccccccHHHHHh
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ----IHLDEMNIHQALQ 315 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~----~~~~~~~v~~~l~ 315 (381)
+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++......... ....+.++.+
T Consensus 6 ~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~--- 82 (160)
T 2o16_A 6 KVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFE--- 82 (160)
T ss_dssp BGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHH---
T ss_pred cHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHH---
Confidence 566779889999999999999999999999999999998899999999999998654321100 0011345555
Q ss_pred cCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 316 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 316 ~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|..++.++.+++++.+|++.|.+++++++||+| + |+++|+||..||++++.
T Consensus 83 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 83 ----------VMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA-K-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp ----------HSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE-T-TEEEEEECHHHHHHHHH
T ss_pred ----------HhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 7777899999999999999999999999999999 4 89999999999999875
No 33
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=5.9e-18 Score=144.02 Aligned_cols=123 Identities=20% Similarity=0.347 Sum_probs=106.3
Q ss_pred ccccccCC---CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANGR---PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~~---~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|.+ ++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++.+..+.... .+.++.+
T Consensus 25 ~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~---~~~~v~~---- 97 (165)
T 3fhm_A 25 FVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAAS---LQQSVSV---- 97 (165)
T ss_dssp BHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGG---GTSBGGG----
T ss_pred CHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCcc---ccCCHHH----
Confidence 56677874 7899999999999999999999999999999999999999999998665432111 1345555
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|..++.++.+++++.+|++.|.+++++++||+| + |+++|+||..||++++..
T Consensus 98 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 98 ---------AMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE-N-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp ---------TSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHTTC
T ss_pred ---------HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 7777899999999999999999999999999999 5 999999999999999864
No 34
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.75 E-value=4e-18 Score=143.49 Aligned_cols=125 Identities=18% Similarity=0.259 Sum_probs=103.1
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcC
Q 016866 240 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 317 (381)
Q Consensus 240 ~v~~~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~ 317 (381)
+++++|. .++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....+.+....+.+.++.+
T Consensus 16 ~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~----- 90 (156)
T 3ctu_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH----- 90 (156)
T ss_dssp TGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG-----
T ss_pred HHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHH-----
Confidence 4456687 678999999999999999999999999999999999999999999987654332211111344544
Q ss_pred CCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 318 QDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 318 ~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|..++.++.+++++.+|++.|.+++ ++||+| ++|+++|+||.+||++++..
T Consensus 91 --------~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd-~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 91 --------MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD-AEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp --------GCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC-TTSBEEEEEETTHHHHHHHH
T ss_pred --------hccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc-CCCeEEEEEEHHHHHHHHHH
Confidence 77778999999999999999999987 799999 47999999999999998853
No 35
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.75 E-value=1.1e-17 Score=141.44 Aligned_cols=122 Identities=17% Similarity=0.358 Sum_probs=103.9
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCC
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 319 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~ 319 (381)
+++++|.++ +++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....+.. ..+.++.+
T Consensus 18 ~v~~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~------- 85 (159)
T 3fv6_A 18 QVKDFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQE----LTSVPVHI------- 85 (159)
T ss_dssp BGGGSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSC----TTTCBGGG-------
T ss_pred CHHHHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCc----ccCcCHHH-------
Confidence 456678874 599999999999999999999999999999999999999999986532211 11345555
Q ss_pred CCCCcccCCC--cceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCC---eEEEEEehHHHHHHhhc
Q 016866 320 ANPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSK---RVEGIISLSDVFRFLLG 380 (381)
Q Consensus 320 ~~~~~~~m~~--~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~---~liGiIs~~DIl~~l~~ 380 (381)
+|.. ++.++.+++++.+|++.|.+++++++||+|+ +| +++|+||..||++++..
T Consensus 86 ------~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 86 ------IMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD-TDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp ------TSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-CSSSEEEEEEEEHHHHHHHHHH
T ss_pred ------HHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCcceeEEEEEEHHHHHHHHHH
Confidence 6766 7899999999999999999999999999994 57 99999999999999864
No 36
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.75 E-value=1.2e-17 Score=138.23 Aligned_cols=126 Identities=26% Similarity=0.503 Sum_probs=101.2
Q ss_pred ccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCCCC
Q 016866 244 ANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPS 323 (381)
Q Consensus 244 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~~ 323 (381)
+|.+++.++.+++++.+|++.|.+++++++||+|++|+++|+++.+|+++....+.+. ..+.++.+++..... .
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~---~~~~~v~~~m~~~~~---~ 89 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYN---DLSLSVGEALMRRSD---D 89 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC-------CCSBHHHHHHHCC-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccc---cCCccHHHHHhcCcc---c
Confidence 3667899999999999999999999999999999889999999999999866543221 114677775432100 0
Q ss_pred cccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 324 LGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 324 ~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+ .++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 90 --~--~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 90 --F--EGVYTCTKNDKLSTIMDNIRKARVHRFFVVD-DVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp --------CEECTTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred --c--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEEHHHHHHHHHh
Confidence 0 1578999999999999999999999999999 47999999999999999864
No 37
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.75 E-value=9.6e-18 Score=140.15 Aligned_cols=118 Identities=12% Similarity=0.250 Sum_probs=104.2
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcC
Q 016866 240 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 317 (381)
Q Consensus 240 ~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~ 317 (381)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+.+....+.. +.+.++.+
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~----- 99 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVD----MRDASIAD----- 99 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSC----CTTCBHHH-----
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCC----cccCcHHH-----
Confidence 67788998 89999999999999999999999999999999999999999999987654321 12467777
Q ss_pred CCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHH
Q 016866 318 QDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFR 376 (381)
Q Consensus 318 ~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~ 376 (381)
+|..++.++.+++++.+|++.|.+++++++||+|+ ++++|+||..||++
T Consensus 100 --------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~~Giit~~dil~ 148 (149)
T 3k2v_A 100 --------VMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG--DHLLGVVHMHDLLR 148 (149)
T ss_dssp --------HSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHTC
T ss_pred --------HcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC--CEEEEEEEHHHhhc
Confidence 66678899999999999999999999999999994 49999999999975
No 38
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.74 E-value=3.9e-18 Score=139.47 Aligned_cols=122 Identities=16% Similarity=0.257 Sum_probs=104.2
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHH-HHhhhhhcccccccccHHHHHhcCC
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQLGQ 318 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~-l~~~~~~~~~~~~~~~v~~~l~~~~ 318 (381)
+++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|+++.+|+.. +...+.. ..+.++.+
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~----~~~~~v~~------ 78 (133)
T 1y5h_A 9 TARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLD----PNTATAGE------ 78 (133)
T ss_dssp CHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCC----TTTSBHHH------
T ss_pred CHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCC----ccccCHHH------
Confidence 456778888999999999999999999999999999998899999999999984 4442211 11356776
Q ss_pred CCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 319 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 319 ~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|.+++.++.+++++.++++.|.+++.+++||+| + |+++|+||.+||++++.+
T Consensus 79 -------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 79 -------LARDSIYYVDANASIQEMLNVMEEHQVRRVPVIS-E-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp -------HHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHTCC-
T ss_pred -------HhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 5556789999999999999999999999999999 4 899999999999998864
No 39
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.74 E-value=8.5e-18 Score=140.42 Aligned_cols=125 Identities=21% Similarity=0.213 Sum_probs=103.4
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhh-cccccccccHHHHHhc
Q 016866 240 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAY-AQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~-~~~~~~~~~v~~~l~~ 316 (381)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....... ........++.+
T Consensus 16 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 91 (150)
T 3lqn_A 16 FVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQ---- 91 (150)
T ss_dssp BHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG----
T ss_pred ChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH----
Confidence 4566787 458999999999999999999999999999999999999999999987642211 000111234444
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|..++.++.+++++.+|++.|.++++ +||+| ++|+++|+||.+||++++..
T Consensus 92 ---------~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd-~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 92 ---------VMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN-EDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp ---------TCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC-TTCBEEEEEEHHHHHHHHHH
T ss_pred ---------HhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC-CCCcEEEEEEHHHHHHHHHH
Confidence 777889999999999999999999997 99999 47999999999999998853
No 40
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.74 E-value=1.7e-17 Score=143.85 Aligned_cols=124 Identities=19% Similarity=0.273 Sum_probs=106.3
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCC
Q 016866 239 PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQ 318 (381)
Q Consensus 239 ~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~ 318 (381)
.+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+++.+|++......... ..+.++.+
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~---~~~~~v~~------ 79 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKK---PDEVPIRL------ 79 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCC---GGGSBGGG------
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccC---cccCCHHH------
Confidence 467778999999999999999999999999999999999889999999999999865421110 01245554
Q ss_pred CCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 319 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 319 ~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|..++.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++.
T Consensus 80 -------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 80 -------VMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVD-DPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp -------TSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEEC-TTCCEEEEEEHHHHTTTSC
T ss_pred -------HhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 7777899999999999999999999999999999 4699999999999998764
No 41
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.73 E-value=6.4e-18 Score=145.37 Aligned_cols=138 Identities=22% Similarity=0.372 Sum_probs=102.9
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhc--------c--ccccc
Q 016866 240 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYA--------Q--IHLDE 307 (381)
Q Consensus 240 ~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~--------~--~~~~~ 307 (381)
+++++|.+ +++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|++++....... . ..|..
T Consensus 5 ~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (180)
T 3sl7_A 5 TVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKT 84 (180)
T ss_dssp BHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCS
T ss_pred eHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhh
Confidence 45677887 789999999999999999999999999999999999999999998532100000 0 00000
Q ss_pred c-cHHHHHhcCCCCCCCcc-cCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 308 M-NIHQALQLGQDANPSLG-FNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 308 ~-~v~~~l~~~~~~~~~~~-~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
. .....+. .....+++ +|.+++.++.+++++.+|++.|.+++++++||+| ++|+++|+||.+||++++..
T Consensus 85 ~~~~~~~~~--~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 85 FNELQKLIS--KTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD-ADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp HHHHHHHHH--TTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC-TTCBEEEEEEHHHHHHHHHH
T ss_pred hHHHHHHHh--ccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHHHHH
Confidence 0 0000000 01111222 7877889999999999999999999999999999 47999999999999999863
No 42
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.73 E-value=2.4e-17 Score=135.13 Aligned_cols=121 Identities=12% Similarity=0.243 Sum_probs=103.4
Q ss_pred ccccccC---CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHH-HHhhhhhcccccccccHHHHHh
Q 016866 240 RIGEANG---RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQ 315 (381)
Q Consensus 240 ~v~~~~~---~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~-l~~~~~~~~~~~~~~~v~~~l~ 315 (381)
+++++|. +++.++.+++++.+|++.|.+++++++||+| +|+++|+++.+|+++ +...+.. ..+.++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~----~~~~~v~~--- 78 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKP----VKDTQVKE--- 78 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSC----GGGSBGGG---
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCC----cccCCHHH---
Confidence 4566787 7899999999999999999999999999999 899999999999986 3332210 11345555
Q ss_pred cCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 316 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 316 ~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|.+++.++.+++++.+|++.|.+++++++||+| + |+++|+||.+||++++.+
T Consensus 79 ----------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 79 ----------IMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp ----------TSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHC
T ss_pred ----------hccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHHHh
Confidence 7777899999999999999999999999999999 4 899999999999999864
No 43
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.73 E-value=3.8e-18 Score=145.98 Aligned_cols=155 Identities=16% Similarity=0.231 Sum_probs=113.4
Q ss_pred HHHHHHHHHhhhCcccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCcEEEEeehHHHHHHHHHhccCCC
Q 016866 41 LSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGS 120 (381)
Q Consensus 41 ~~~~~~~~~l~~~~~~d~~p~s~~vi~ld~~~~v~~A~~~l~~~~i~~~pV~d~~~~~~vGilt~~D~~~il~~~~~~~~ 120 (381)
..++.+...|++.++.|+|- .++++++++.|+.+|++.|.+++++++||+|++ ++++|++|..|+++.+.....
T Consensus 6 ~~~~~~~~~l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~--- 79 (170)
T 4esy_A 6 ARRRAIARAIRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI--- 79 (170)
T ss_dssp HHHHHHHHHHHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH---
T ss_pred HHHHHHHHHHcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc---
Confidence 35677888999999999994 579999999999999999999999999999975 569999999999753311000
Q ss_pred CCChhHH-hh-ccHHHHHHHHHhhhccccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccce
Q 016866 121 NLTEEEL-ET-HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEI 198 (381)
Q Consensus 121 ~~~~~~l-~~-~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~ 198 (381)
....+. .. .............. ...++.+|.++++++.+++++.+|+++|.+++++++||+|+ | ++
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~----g---~l 147 (170)
T 4esy_A 80 -YEASEILSRAIPAPEVEHLFETGR----KLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD----G---VP 147 (170)
T ss_dssp -HHHHHHHTTTSCHHHHHHHHHHHT----TCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET----T---EE
T ss_pred -cchhhhhhhccchhhHHhhhcccc----ccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC----C---EE
Confidence 000000 00 00011111110000 00112368899999999999999999999999999999964 6 89
Q ss_pred EEEeehhhHHHHHhh
Q 016866 199 LYLASLSDILKCICR 213 (381)
Q Consensus 199 ~gils~~dil~~l~~ 213 (381)
+|++|.+||++++..
T Consensus 148 vGivt~~Dil~~l~~ 162 (170)
T 4esy_A 148 VGIVTRRDLLKLLLL 162 (170)
T ss_dssp EEEEEHHHHTTTSCC
T ss_pred EEEEEHHHHHHHHHh
Confidence 999999999997754
No 44
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.73 E-value=4.8e-17 Score=147.42 Aligned_cols=198 Identities=11% Similarity=0.078 Sum_probs=130.0
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCC---CCc------
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS---SLP------ 223 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~---~~~------ 223 (381)
.+|.++++++.+++++.+|+++|.+++++++||+|+ +| +++|++|..|+++++......... ...
T Consensus 11 ~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~ 84 (245)
T 3l2b_A 11 DLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG---NN---HLLGMLSTSNITATYMDIWDSNILAKSATSLDNILD 84 (245)
T ss_dssp GSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHH
T ss_pred HhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHH
Confidence 478899999999999999999999999999999976 57 899999999999988543211000 000
Q ss_pred -----------cccCcccccccccc-ccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCC-----------
Q 016866 224 -----------ILQQPVSSIQLGTW-VPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND----------- 280 (381)
Q Consensus 224 -----------~~~~~i~~l~ig~~-~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g----------- 280 (381)
......+.+.++.. ...+.+.+....+.+-.+. .++...+.+.+++++++++...
T Consensus 85 ~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr--~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~ 162 (245)
T 3l2b_A 85 TLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDR--AEIQAELIELKVSLLIVTGGHTPSKEIIELAKK 162 (245)
T ss_dssp HTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSC--HHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH
T ss_pred HhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCC--HHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH
Confidence 00000111111111 1122333444444444443 8889999999999999986321
Q ss_pred -cEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCCCCcccCC-CcceEEcCCCCHHHHHHHHHhCCCCEEEEE
Q 016866 281 -SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNG-QRCQMCLRSDPLHKVMERLANPGVRRLVIV 358 (381)
Q Consensus 281 -~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~m~-~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vv 358 (381)
.+-.+.+..|.......-. ...++++ +|+ +++.++++++++.+|++.|.+++++++||+
T Consensus 163 ~~~~~i~t~~d~~~~~~~~~------~~~~v~~-------------im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVv 223 (245)
T 3l2b_A 163 NNITVITTPHDSFTASRLIV------QSLPVDY-------------VMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVI 223 (245)
T ss_dssp HTCEEEECSSCHHHHHHHGG------GGSBHHH-------------HSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEE
T ss_pred cCCeEEEeCCChHHHHHHHh------cCCceee-------------EecCCccEEECCCCcHHHHHHHHHhcCCceEEEE
Confidence 1223333333332211000 0234555 787 789999999999999999999999999999
Q ss_pred eCCCCeEEEEEehHHHHHHh
Q 016866 359 EAGSKRVEGIISLSDVFRFL 378 (381)
Q Consensus 359 d~~~~~liGiIs~~DIl~~l 378 (381)
|+ +|+++|+||.+|++++.
T Consensus 224 d~-~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 224 DE-NNKVVGSIARFHLISTH 242 (245)
T ss_dssp CT-TCBEEEEEECC------
T ss_pred cC-CCeEEEEEEHHHhhchh
Confidence 94 79999999999999864
No 45
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.73 E-value=3.4e-17 Score=138.58 Aligned_cols=132 Identities=14% Similarity=0.227 Sum_probs=104.6
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcC--CCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 239 PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD--NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 239 ~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
.+++++|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|++|..|+.+....+..........++.+.+..
T Consensus 13 ~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~ 92 (164)
T 2pfi_A 13 VRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILAR 92 (164)
T ss_dssp CBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHT
T ss_pred CCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhcc
Confidence 3567779999999999999999999999999999999996 79999999999999866432211111113466665542
Q ss_pred CCCCCCCcccCCCc-ceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQR-CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~-~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
.. ...+ +.++.+++++.+|++.|.+++++++||+| + |+++|+||.+||++++.+
T Consensus 93 ~~--------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 93 GC--------PTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-R-GRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp TC--------CCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHHHHH
T ss_pred cc--------cccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 11 0112 68999999999999999999999999999 3 899999999999998753
No 46
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.72 E-value=3.6e-17 Score=137.63 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=103.2
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhh-hcccccccccHHHHHhc
Q 016866 240 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA-YAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~-~~~~~~~~~~v~~~l~~ 316 (381)
+++++|.+ ++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....+. +....+...++.+
T Consensus 12 ~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 87 (157)
T 2emq_A 12 TVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEE---- 87 (157)
T ss_dssp BSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGG----
T ss_pred cHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHH----
Confidence 45666876 8889999999999999999999999999998899999999999998654321 1000111234444
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|.+++.++.+++++.+|++.|.++++ +||+|+ +|+++|+||.+||++++..
T Consensus 88 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~-~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 88 ---------VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND-DGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp ---------TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS-SSSEEEEEEHHHHHHHHHH
T ss_pred ---------HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC-CCeEEEEEEHHHHHHHHHH
Confidence 777889999999999999999999987 999994 6999999999999998753
No 47
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.72 E-value=5.6e-17 Score=139.23 Aligned_cols=118 Identities=15% Similarity=0.189 Sum_probs=101.0
Q ss_pred ccccccC--CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCC-CcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|+++.+|++.....+. ..++.
T Consensus 37 ~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~-------~~~v~----- 104 (173)
T 3ocm_A 37 SIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-------RVRRN----- 104 (173)
T ss_dssp CSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------SCCGG-----
T ss_pred CHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC-------cchhH-----
Confidence 4566685 468899999999999999999999999999976 89999999999998654321 12332
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
|.++++++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++++
T Consensus 105 ----------~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd-e~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 105 ----------RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD-EFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp ----------GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC-TTCCEEEEECHHHHHHHHHC
T ss_pred ----------hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe-CCCCEEEEEeHHHHHHHHhC
Confidence 224688999999999999999999999999999 47999999999999999975
No 48
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.72 E-value=5.1e-17 Score=136.92 Aligned_cols=125 Identities=9% Similarity=0.142 Sum_probs=104.3
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhCCCcE-EEEEcCCCcEEEEEeHHHHHHHHhhhh---hcc--------ccccc
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQADVSS-IPIVDDNDSLLDIYSRSDITALAKDKA---YAQ--------IHLDE 307 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~-lpVvd~~g~lvGiis~~Di~~l~~~~~---~~~--------~~~~~ 307 (381)
+++++|.+++.++.+++++.+|++.|.++++++ +||+|++ +++|++|..|+++...... ... ....+
T Consensus 17 ~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (157)
T 1o50_A 17 DVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLIA 95 (157)
T ss_dssp HHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCSS
T ss_pred cHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHcC
Confidence 567789999999999999999999999999999 9999977 9999999999998643110 000 00112
Q ss_pred ccHHHHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 308 MNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 308 ~~v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
.++.+ +|.+ +.++.+++++.+|++.|.+++++++||+| ++|+++|+||..||++++.+
T Consensus 96 ~~v~~-------------im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 96 KNASE-------------IMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD-EKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp CBHHH-------------HCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHH
T ss_pred CcHHH-------------HcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc-CCCEEEEEEEHHHHHHHHHH
Confidence 34444 7877 89999999999999999999999999999 46999999999999998864
No 49
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.72 E-value=3.6e-17 Score=137.78 Aligned_cols=126 Identities=13% Similarity=0.270 Sum_probs=105.2
Q ss_pred ccccccccccC------CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhccccccccc
Q 016866 236 TWVPRIGEANG------RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMN 309 (381)
Q Consensus 236 ~~~~~v~~~~~------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~ 309 (381)
++..+++++|. +++.++.+++++.+|++.|.+++++++||++ +|+++|++|.+|+++.+...... ..+.+
T Consensus 4 ~~~~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~---~~~~~ 79 (157)
T 4fry_A 4 SMSTTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERS---SKATR 79 (157)
T ss_dssp ---CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCC---SSSCB
T ss_pred cHHHHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCC---ccccC
Confidence 34445777787 5679999999999999999999999999965 89999999999999865433211 11466
Q ss_pred HHHHHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 310 IHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 310 v~~~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+.+ +|..++.++.+++++.+|++.|.+++++++||+| + |+++|+||..||++++..
T Consensus 80 v~~-------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 80 VEE-------------IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp HHH-------------HSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHT
T ss_pred HHH-------------HcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 777 6667889999999999999999999999999999 3 899999999999999864
No 50
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.72 E-value=3.3e-17 Score=138.34 Aligned_cols=124 Identities=19% Similarity=0.215 Sum_probs=103.8
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhh-hcccccccccHHHHHhc
Q 016866 240 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA-YAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~-~~~~~~~~~~v~~~l~~ 316 (381)
+++++|.+ ++.++.+++++.+|++.|.+++++++||+|++|+++|++|..|++....... +........++.+
T Consensus 15 ~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 90 (159)
T 1yav_A 15 TVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEE---- 90 (159)
T ss_dssp BHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHH----
T ss_pred hHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHH----
Confidence 45666877 8999999999999999999999999999998899999999999998665321 1111112356666
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.+++.++.+++++.+|++.|.++++ +||+|+ +|+++|+||.+||++++.
T Consensus 91 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~-~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 91 ---------VMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND-EQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp ---------HSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred ---------hcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC-CCeEEEEEEHHHHHHHHH
Confidence 677789999999999999999999987 999994 799999999999999875
No 51
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.71 E-value=7.1e-17 Score=142.46 Aligned_cols=117 Identities=15% Similarity=0.203 Sum_probs=104.0
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhC---CCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHh
Q 016866 239 PRIGEANGRPFAMLRPTASLGSALALLVQA---DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 315 (381)
Q Consensus 239 ~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~---~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~ 315 (381)
.+++++|.++++++.+++++.+|++.|.+. +++.+||+|++|+++|++|.+|++... .+.++.+
T Consensus 54 ~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~--- 120 (205)
T 3kxr_A 54 NEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE----------PHEPLIS--- 120 (205)
T ss_dssp TCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC----------TTSBGGG---
T ss_pred chHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC----------CcchHHH---
Confidence 367788999999999999999999999987 899999999999999999999987521 0245555
Q ss_pred cCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 316 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 316 ~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.++++++++++++.+|++.|.+++++.+|||| ++|+++|+||..||++.+.
T Consensus 121 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD-~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 121 ----------LLSEDSRALTANTTLLDAAEAIEHSREIELPVID-DAGELIGRVTLRAATALVR 173 (205)
T ss_dssp ----------GCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ----------HhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 7888899999999999999999999999999999 4799999999999999874
No 52
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.70 E-value=4.3e-17 Score=144.76 Aligned_cols=121 Identities=14% Similarity=0.196 Sum_probs=105.4
Q ss_pred cccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHH
Q 016866 235 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQAL 314 (381)
Q Consensus 235 g~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l 314 (381)
.+|..+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+.+... +.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~----------~~~v~~-- 76 (213)
T 1vr9_A 9 HHHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL----------DSSVFN-- 76 (213)
T ss_dssp ----CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT----------TSBSGG--
T ss_pred cccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC----------CCcHHH--
Confidence 35777888999999999999999999999999999999999998899999999999876322 234444
Q ss_pred hcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 315 QLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 315 ~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|+++++.
T Consensus 77 -----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGiit~~Dil~~~~ 129 (213)
T 1vr9_A 77 -----------KVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDE-EMRLKGAVSLHDFLEALI 129 (213)
T ss_dssp -----------GCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred -----------HccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcC-CCEEEEEEEHHHHHHHHH
Confidence 77778999999999999999999999999999994 699999999999999874
No 53
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.69 E-value=1.5e-16 Score=141.22 Aligned_cols=154 Identities=14% Similarity=0.152 Sum_probs=100.6
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccc
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 232 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l 232 (381)
..|..+++++.+++++.+|+++|.+++++.+||+|+ ++ +++|++|..|+++++. ..
T Consensus 17 ~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~l~Givt~~dl~~~~~-------------~~----- 72 (213)
T 1vr9_A 17 KWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDR---EG---HFRGVVNKEDLLDLDL-------------DS----- 72 (213)
T ss_dssp GGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECT---TS---BEEEEEEGGGGTTSCT-------------TS-----
T ss_pred HhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---EEEEEEEHHHHHhhcC-------------CC-----
Confidence 368899999999999999999999999999999975 46 8999999999976321 11
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHH
Q 016866 233 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 312 (381)
Q Consensus 233 ~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~ 312 (381)
.++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+++...... ...+
T Consensus 73 -------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~---------~~~~ 136 (213)
T 1vr9_A 73 -------SVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL---------AMDV 136 (213)
T ss_dssp -------BSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC---------C---
T ss_pred -------cHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh---------cCCC
Confidence 345668889999999999999999999999999999998899999999999998654221 1111
Q ss_pred HHhcCCCCCCCcccCCC-cceEEcCCCCHHHHHHHHHhCCCCEEEEEe
Q 016866 313 ALQLGQDANPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVE 359 (381)
Q Consensus 313 ~l~~~~~~~~~~~~m~~-~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd 359 (381)
.+.+ .+.+.....++.+|.+.|.+++++.++|++
T Consensus 137 -------------~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~ 171 (213)
T 1vr9_A 137 -------------PGIRFSVLLEDKPGELRKVVDALALSNINILSVIT 171 (213)
T ss_dssp ------------------------------------------------
T ss_pred -------------CcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEE
Confidence 0000 111223334599999999999999999876
No 54
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.69 E-value=4.4e-17 Score=137.32 Aligned_cols=114 Identities=11% Similarity=0.288 Sum_probs=99.4
Q ss_pred ccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCC-cEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhc
Q 016866 240 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDND-SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 316 (381)
Q Consensus 240 ~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~ 316 (381)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|+++ +++|++|.+|+++....+ .+.++.+
T Consensus 39 ~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~~---- 107 (156)
T 3oi8_A 39 EVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------EQFHLKS---- 107 (156)
T ss_dssp BGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-------GGCCHHH----
T ss_pred CHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-------CcccHHH----
Confidence 56777876 789999999999999999999999999999874 999999999998854432 1356776
Q ss_pred CCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHH
Q 016866 317 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVF 375 (381)
Q Consensus 317 ~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl 375 (381)
+|. ++.++++++++.+|++.|.+++++++||+| ++|+++|+||..||+
T Consensus 108 ---------im~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd-~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 108 ---------ILR-PAVFVPEGKSLTALLKEFREQRNHMAIVID-EYGGTSGLVTFEDII 155 (156)
T ss_dssp ---------HCB-CCCEEETTSBHHHHHHHHHHTTCCEEEEEC-TTSSEEEEEEHHHHC
T ss_pred ---------HcC-CCEEECCCCCHHHHHHHHHhcCCeEEEEEC-CCCCEEEEEEHHHhc
Confidence 564 488999999999999999999999999999 479999999999986
No 55
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.68 E-value=1.7e-16 Score=137.15 Aligned_cols=138 Identities=14% Similarity=0.178 Sum_probs=102.8
Q ss_pred ccccccCCC----ceEe--cCCCCHHHHHHHHHhCCCcEEEEE--cCCCcEEEEEeHHHHHHHHhhhhhcccccccccHH
Q 016866 240 RIGEANGRP----FAML--RPTASLGSALALLVQADVSSIPIV--DDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIH 311 (381)
Q Consensus 240 ~v~~~~~~~----~~~v--~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~ 311 (381)
+++++|.+. ++++ .+++++.+|++.|.+++++++||+ |++|+++|+||..|+++...........+.+.+..
T Consensus 12 ~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~ 91 (185)
T 2j9l_A 12 LAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSII 91 (185)
T ss_dssp BHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEE
T ss_pred cHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcccccee
Confidence 566678776 7888 999999999999999999999999 78899999999999998654321100000000000
Q ss_pred HHH------hcCCCCCCCcc-cCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 312 QAL------QLGQDANPSLG-FNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 312 ~~l------~~~~~~~~~~~-~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
.+. ........+++ +|..++.++.+++++.+|++.|.+++++++||+| +|+++|+||..||++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 92 YFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH--NGRLLGIITKKDVLKHIA 164 (185)
T ss_dssp ECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred ecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 000 00000111222 7877899999999999999999999999999999 489999999999999875
No 56
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.68 E-value=1.8e-16 Score=133.76 Aligned_cols=118 Identities=18% Similarity=0.228 Sum_probs=98.1
Q ss_pred CCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccccc
Q 016866 156 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 235 (381)
Q Consensus 156 ~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig 235 (381)
..+++++.+++|+.+|+++|.+++++++||+|+ +| +++|++|.+|+++++....... .....
T Consensus 24 ~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~---~~---~lvGiit~~Di~~~~~~~~~~~---~~~~~--------- 85 (156)
T 3k6e_A 24 AKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMAD--------- 85 (156)
T ss_dssp TTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTT---------
T ss_pred hhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC---CC---cEEEEEEecchhhhhhhccccc---ccccc---------
Confidence 367899999999999999999999999999975 57 8999999999999876532110 01111
Q ss_pred ccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 236 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 236 ~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
..++++|.+++.++.+++++.+|+++|.++++ +||||++|+++|+||.+|+++.+.
T Consensus 86 ---~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 86 ---TDIVHMTKTDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp ---SBGGGTCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHH
T ss_pred ---cCHHHhhcCCceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHH
Confidence 24556699999999999999999999988764 999999999999999999999765
No 57
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.68 E-value=3.7e-16 Score=130.19 Aligned_cols=116 Identities=14% Similarity=0.143 Sum_probs=100.4
Q ss_pred CCCCC--CceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccc
Q 016866 153 RPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 230 (381)
Q Consensus 153 ~~~~~--~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~ 230 (381)
.+|.+ +++++.+++++.+|++.|.+++++++||+|+ ..| +++|++|.+|+++++.... ..
T Consensus 27 diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~--- 88 (148)
T 3lv9_A 27 EIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK--NKD---DILGFVHIRDLYNQKINEN----------KI--- 88 (148)
T ss_dssp GTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------CC---
T ss_pred HccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhcCC----------Cc---
Confidence 37777 8999999999999999999999999999965 126 8999999999999765421 12
Q ss_pred cccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 231 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 231 ~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
.++++| +++.++.+++++.+|++.|.+++++.+||+|++|+++|++|..|+++.+.
T Consensus 89 ---------~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 89 ---------ELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp ---------CGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred ---------cHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 344558 78899999999999999999999999999999999999999999998655
No 58
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.68 E-value=3.2e-16 Score=142.05 Aligned_cols=140 Identities=16% Similarity=0.283 Sum_probs=106.1
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCC--CcEEEEEeHHHHHHHHhhhhh--ccc-----------
Q 016866 239 PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN--DSLLDIYSRSDITALAKDKAY--AQI----------- 303 (381)
Q Consensus 239 ~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--g~lvGiis~~Di~~l~~~~~~--~~~----------- 303 (381)
..++++|.++++++.+++++.+|.++|.+++++++||||++ |+++|+|+++||++++..... ...
T Consensus 13 ~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~ 92 (250)
T 2d4z_A 13 IQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEG 92 (250)
T ss_dssp CBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC-
T ss_pred CChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcccccc
Confidence 46788899999999999999999999999999999999963 689999999999986553210 000
Q ss_pred -----------------cccc---------------------------------------------------------cc
Q 016866 304 -----------------HLDE---------------------------------------------------------MN 309 (381)
Q Consensus 304 -----------------~~~~---------------------------------------------------------~~ 309 (381)
.+.+ ++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 172 (250)
T 2d4z_A 93 RNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLT 172 (250)
T ss_dssp --------------------------------------------------------------------------CCSCCB
T ss_pred cccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccC
Confidence 0000 00
Q ss_pred HHHHHhc-CCCCCCCc---c-cCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 310 IHQALQL-GQDANPSL---G-FNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 310 v~~~l~~-~~~~~~~~---~-~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
..+.... ......++ . +|+..++++.++++|.+|..+|...|++++||++ .|+++||||+.||++++.+
T Consensus 173 ~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~--~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 173 LEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS--MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred hhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE--CCEEEEEEEHHHHHHHHHH
Confidence 0000000 00011222 1 5888999999999999999999999999999998 4999999999999999865
No 59
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.67 E-value=5.9e-16 Score=136.51 Aligned_cols=122 Identities=15% Similarity=0.125 Sum_probs=106.7
Q ss_pred ccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhC---CcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCC
Q 016866 146 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN---KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSL 222 (381)
Q Consensus 146 ~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~---~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~ 222 (381)
+..+.+|.+|..+++++.+++++.+|++.|.++ +++.+||+|+ .| +++|++|.+|++..
T Consensus 51 ~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~------------ 112 (205)
T 3kxr_A 51 YSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE---AD---KYLGTVRRYDIFKH------------ 112 (205)
T ss_dssp SCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT---TC---BEEEEEEHHHHTTS------------
T ss_pred CCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC---CC---eEEEEEEHHHHHhC------------
Confidence 667778889999999999999999999999987 8999999976 57 89999999999751
Q ss_pred ccccCccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhh
Q 016866 223 PILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 298 (381)
Q Consensus 223 ~~~~~~i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~ 298 (381)
.... .++++|.++++++.+++++.+|++.|.+++++.+||||++|+++|+||..|++..+.+.
T Consensus 113 -~~~~------------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 113 -EPHE------------PLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREH 175 (205)
T ss_dssp -CTTS------------BGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred -CCcc------------hHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 0112 34556888999999999999999999999999999999999999999999999977643
No 60
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.67 E-value=3.7e-16 Score=127.31 Aligned_cols=119 Identities=11% Similarity=0.116 Sum_probs=99.1
Q ss_pred CCCCCC--CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCc
Q 016866 151 NGRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 228 (381)
Q Consensus 151 ~g~~~~--~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~ 228 (381)
++.+|. .+++++.+++++.+|++.|.+++++++||+++ ..| +++|++|.+|+++++.... ...
T Consensus 8 v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~~~---------~~~- 72 (130)
T 3i8n_A 8 VTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE--QKD---NIIGFVHRLELFKMQQSGS---------GQK- 72 (130)
T ss_dssp CTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS--STT---CEEEECCHHHHHHHHHTTT---------TTS-
T ss_pred HhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---cEEEEEEHHHHHHHHhcCC---------CcC-
Confidence 344777 56779999999999999999999999999965 226 8999999999999765321 012
Q ss_pred cccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 229 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 229 i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
.++++|. ++.++.+++++.+|++.|.+++++.+||+|++|+++|++|..|+++.+.
T Consensus 73 -----------~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 73 -----------QLGAVMR-PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp -----------BHHHHSE-ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred -----------CHHHHhc-CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 3344573 5789999999999999999999999999999999999999999998654
No 61
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.66 E-value=8.9e-16 Score=131.46 Aligned_cols=119 Identities=10% Similarity=0.062 Sum_probs=102.2
Q ss_pred CCCCCC--CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCc
Q 016866 151 NGRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 228 (381)
Q Consensus 151 ~g~~~~--~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~ 228 (381)
++.+|. .+++++.+++++.+|++.|.+++++++||+++ ..+ +++|++|..|+++++.... ..
T Consensus 44 v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~- 107 (172)
T 3lhh_A 44 ISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN--NVD---DMVGIISAKQLLSESIAGE----------RL- 107 (172)
T ss_dssp TTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS--STT---SEEEEEEHHHHHHHHHTTC----------CC-
T ss_pred HHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---eEEEEEEHHHHHHHHhhcC----------cc-
Confidence 455788 78899999999999999999999999999965 126 8999999999999764320 12
Q ss_pred cccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 229 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 229 i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
.++++| ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+..
T Consensus 108 -----------~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 108 -----------ELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp -----------CGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred -----------cHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 345558 788999999999999999999999999999989999999999999997653
No 62
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.65 E-value=1.2e-15 Score=122.40 Aligned_cols=114 Identities=20% Similarity=0.331 Sum_probs=100.7
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
+|.++++++.+++++.+|++.|.+++.+.+||+|+ +| +++|+++..|+++++.... .
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~-----------~------ 62 (122)
T 3kpb_A 6 ILSKPPITAHSNISIMEAAKILIKHNINHLPIVDE---HG---KLVGIITSWDIAKALAQNK-----------K------ 62 (122)
T ss_dssp HCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECT---TS---BEEEEECHHHHHHHHHTTC-----------C------
T ss_pred hhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---CEEEEEEHHHHHHHHHhcc-----------c------
Confidence 57788999999999999999999999999999975 57 8999999999999765311 1
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 234 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 234 ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
.++++|.+++.++.+++++.++++.|.+++.+.+||+|++|+++|++|..|+++++.
T Consensus 63 ------~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 63 ------TIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp ------BGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred ------CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 244558788999999999999999999999999999998899999999999998654
No 63
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.64 E-value=2.9e-16 Score=127.40 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=95.9
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccc
Q 016866 154 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 154 ~~~~--~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
+|.. +++++.+++++.+|++.|.+++++++||+++ ..| +++|++|..|+++++.... ..
T Consensus 8 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~---------~~----- 68 (127)
T 3nqr_A 8 IMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISE--DKD---HIEGILMAKDLLPFMRSDA---------EA----- 68 (127)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGSTTC---------CC-----
T ss_pred hcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhccC---------CC-----
Confidence 4663 4889999999999999999999999999965 226 8999999999998653211 11
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHH
Q 016866 232 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 295 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~ 295 (381)
..++++|.+ +.++.+++++.+|++.|.+++++.+||+|++|+++|++|..|+++.+
T Consensus 69 -------~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 69 -------FSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp -------CCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred -------CCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 134455754 67899999999999999999999999999999999999999999854
No 64
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.64 E-value=6.9e-16 Score=143.17 Aligned_cols=117 Identities=15% Similarity=0.244 Sum_probs=104.6
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhC-----CCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHH
Q 016866 239 PRIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 313 (381)
Q Consensus 239 ~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~ 313 (381)
.+++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|++|.+|++... .+.++.+
T Consensus 137 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~----------~~~~v~~- 205 (286)
T 2oux_A 137 ETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND----------DDTLIAD- 205 (286)
T ss_dssp TBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC----------TTSBHHH-
T ss_pred HHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC----------CCCcHHH-
Confidence 467788999999999999999999999987 889999999999999999999997631 1356776
Q ss_pred HhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 314 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 314 l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.++++++++++++.+|++.|.+++++++|||| ++|+++|+||..||++++.
T Consensus 206 ------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 206 ------------ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD-YDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp ------------HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ------------HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 6777899999999999999999999999999999 4799999999999999874
No 65
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.64 E-value=8.5e-16 Score=125.05 Aligned_cols=114 Identities=10% Similarity=0.108 Sum_probs=95.3
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccc
Q 016866 154 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 154 ~~~--~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
+|. .+++++.+++++.+|++.|.+++++++||+++ ..| +++|++|.+|+++++.. ...
T Consensus 10 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~-----------~~~---- 69 (129)
T 3jtf_A 10 IMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYED--DRD---NIIGILLAKDLLRYMLE-----------PAL---- 69 (129)
T ss_dssp HCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESS--STT---CEEEEEEGGGGGGGGTC-----------TTS----
T ss_pred hCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcC--CCC---cEEEEEEHHHHHhHhcc-----------CCc----
Confidence 465 67889999999999999999999999999965 226 89999999999885531 011
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 232 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
.++++|.+ +.++.+++++.+|+++|.+++.+.+||+|++|+++|++|..|+++.+.
T Consensus 70 --------~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 70 --------DIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp --------CGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred --------CHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 23444654 789999999999999999999999999998899999999999998654
No 66
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.63 E-value=7e-16 Score=125.25 Aligned_cols=117 Identities=18% Similarity=0.187 Sum_probs=100.4
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccc
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 232 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l 232 (381)
.+|.++++++.+++++.+|++.|.+++.+.+||+|+ | +++|++|..|+++++..... .
T Consensus 9 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~----~---~~~Givt~~dl~~~~~~~~~--------~------- 66 (128)
T 3gby_A 9 YLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG----E---RYLGMVHLSRLLEGRKGWPT--------V------- 66 (128)
T ss_dssp GGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHHTTCSSSCC--------T-------
T ss_pred HhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC----C---EEEEEEEHHHHHHHHhhCCc--------c-------
Confidence 368889999999999999999999999999999964 5 89999999999875432110 0
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 233 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 233 ~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
...++++|.+++.++.+++++.++++.|.+++.+++||+|++|+++|++|..|+++.+.
T Consensus 67 -----~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 67 -----KEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp -----TCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred -----cCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 02345668888999999999999999999999999999999999999999999998765
No 67
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.63 E-value=2.3e-15 Score=122.78 Aligned_cols=118 Identities=22% Similarity=0.329 Sum_probs=101.3
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccc
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 232 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l 232 (381)
.+|.++++++.+++++.+|++.|.+++.+.+||+| +| +++|++|..|+++++..... ..
T Consensus 8 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~--------~~------ 66 (133)
T 2ef7_A 8 EYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD----GN---KPVGIITERDIVKAIGKGKS--------LE------ 66 (133)
T ss_dssp GTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHTTCC--------TT------
T ss_pred HhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEcHHHHHHHHhcCCC--------cc------
Confidence 37888899999999999999999999999999996 26 89999999999987654211 11
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 233 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 233 ~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
..++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|+++.+..
T Consensus 67 ------~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 67 ------TKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp ------CBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred ------cCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 23455577789999999999999999999999999999989999999999999986653
No 68
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.63 E-value=1.3e-15 Score=140.64 Aligned_cols=117 Identities=18% Similarity=0.272 Sum_probs=102.1
Q ss_pred ccccccCCCceEecCCCCHHHHHHHHHhC-----CCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHH
Q 016866 240 RIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQAL 314 (381)
Q Consensus 240 ~v~~~~~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l 314 (381)
+++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|++|.+|++... .+.++.+
T Consensus 136 ~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~-- 203 (278)
T 2yvy_A 136 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAE-- 203 (278)
T ss_dssp BGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC----------TTCBSTT--
T ss_pred hHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC----------CCCcHHH--
Confidence 56777999999999999999999999987 789999999899999999999998631 0234444
Q ss_pred hcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 016866 315 QLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 315 ~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~~ 380 (381)
+|.++++++++++++.+|++.|.+++.+.+|||| ++|+++|+||..||++.+.+
T Consensus 204 -----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 204 -----------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp -----------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHC--
T ss_pred -----------HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe-CCCeEEEEEEHHHHHHHHHH
Confidence 7877899999999999999999999999999999 47999999999999998753
No 69
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.63 E-value=7.3e-16 Score=126.67 Aligned_cols=117 Identities=9% Similarity=0.093 Sum_probs=97.1
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccc
Q 016866 154 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 154 ~~~--~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
+|. .+++++.+++++.+|++.|.+++++++||+++ ..| +++|++|..|+++++.... ....
T Consensus 8 iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~--------~~~~---- 70 (136)
T 3lfr_A 8 IMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGE--SHD---DVLGVLLAKDLLPLILKAD--------GDSD---- 70 (136)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGGSSS--------GGGC----
T ss_pred ccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHhcc--------CCCc----
Confidence 455 57899999999999999999999999999965 226 7999999999998654210 0112
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 232 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
.++++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|+++.+.
T Consensus 71 --------~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 71 --------DVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp --------CGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred --------CHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 34455765 889999999999999999999999999999999999999999998544
No 70
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.62 E-value=4.1e-15 Score=119.81 Aligned_cols=117 Identities=17% Similarity=0.229 Sum_probs=99.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
+|.++++++.+++++.+|++.|.+++.+.+||+| +| +++|++|..|+++++..... ...
T Consensus 6 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~G~it~~dl~~~~~~~~~-------~~~------- 64 (125)
T 1pbj_A 6 VMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK----EG---VRVGIVTTWDVLEAIAEGDD-------LAE------- 64 (125)
T ss_dssp HCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE----TT---EEEEEEEHHHHHHHHHHTCC-------TTT-------
T ss_pred hcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe----CC---eeEEEEeHHHHHHHHhcCCc-------ccc-------
Confidence 5778899999999999999999999999999996 36 89999999999987654211 011
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 234 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 234 ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
..++++|.+++.++.+++++.++++.|.+++++++||+|+ |+++|++|.+|+++.+..
T Consensus 65 -----~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 65 -----VKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp -----SBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred -----cCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 2345558888999999999999999999999999999997 999999999999986653
No 71
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.62 E-value=8.8e-16 Score=127.97 Aligned_cols=132 Identities=17% Similarity=0.245 Sum_probs=101.4
Q ss_pred CCCCC--CceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccc
Q 016866 153 RPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 230 (381)
Q Consensus 153 ~~~~~--~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~ 230 (381)
.+|.+ +++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++...... ..+.. ..
T Consensus 9 ~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~~~-----~~~~~-~~ 76 (152)
T 4gqw_A 9 EFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE---DW---KLVGLVSDYDLLALDSGDSTW-----KTFNA-VQ 76 (152)
T ss_dssp GTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHTTCC----CC-----HHHHH-HH
T ss_pred hccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC---CC---eEEEEEEHHHHHHhhcccCcc-----cchHH-HH
Confidence 36766 7999999999999999999999999999976 57 899999999998754321100 00000 00
Q ss_pred cccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 231 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 231 ~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
..........++++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|++|.+|+++.+.
T Consensus 77 ~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 77 KLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp TC-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HHHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 000011123466778888999999999999999999999999999999999999999999999665
No 72
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.62 E-value=2.1e-15 Score=127.42 Aligned_cols=126 Identities=17% Similarity=0.230 Sum_probs=103.2
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccc
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 232 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l 232 (381)
.+|.++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++...+..... .
T Consensus 9 dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~~~~----------~- 71 (160)
T 2o16_A 9 DMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA---NK---KLLGIVSQRDLLAAQESSLQRSAQ----------G- 71 (160)
T ss_dssp GTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHHHCC----------------
T ss_pred HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHHhhccccc----------c-
Confidence 378888999999999999999999999999999975 57 899999999999987654321100 0
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 233 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 233 ~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
.-......+.++|.+++.++.+++++.+|++.|.+++++++||+|+ |+++|+||..|+++.+.
T Consensus 72 ~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 72 DSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp ----CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHH
T ss_pred cchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 0001123456678889999999999999999999999999999997 99999999999998655
No 73
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.62 E-value=2.5e-15 Score=126.86 Aligned_cols=117 Identities=13% Similarity=0.203 Sum_probs=99.1
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
+|.++ +++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++.... ....
T Consensus 22 im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~-------~~~~------- 80 (159)
T 3fv6_A 22 FQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDR---DA---VLVGVLSRKDLLRASIGQQ-------ELTS------- 80 (159)
T ss_dssp SCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHTSCS-------CTTT-------
T ss_pred HcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---cEEEEEeHHHHHHHhhccC-------cccC-------
Confidence 67764 59999999999999999999999999975 56 8999999999999764321 0111
Q ss_pred ccccccccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCC---cEEEEEeHHHHHHHHh
Q 016866 234 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDND---SLLDIYSRSDITALAK 296 (381)
Q Consensus 234 ig~~~~~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g---~lvGiis~~Di~~l~~ 296 (381)
..++++|.+ ++.++.+++++.+|+++|.+++++++||+|++| +++|+||..|+++++.
T Consensus 81 -----~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 81 -----VPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp -----CBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHH
T ss_pred -----cCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHH
Confidence 234555877 889999999999999999999999999999888 9999999999999665
No 74
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.61 E-value=4.8e-15 Score=121.72 Aligned_cols=119 Identities=15% Similarity=0.287 Sum_probs=100.2
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccc
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 232 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l 232 (381)
.+|.++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++.+.....
T Consensus 11 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~---------------- 68 (138)
T 2yzi_A 11 VYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND---DG---NVVGFFTKSDIIRRVIVPGL---------------- 68 (138)
T ss_dssp GTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTCC----------------
T ss_pred HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHhcCC----------------
Confidence 378889999999999999999999999999999975 56 89999999999843221100
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 233 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 233 ~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
.....++++|.+++.++.+++++.+|++.|.+++++++ |+|++|+++|++|..|+++.+..
T Consensus 69 ---~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 69 ---PYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp ---CTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHC
T ss_pred ---cccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHH
Confidence 01124556688899999999999999999999999999 99988999999999999997653
No 75
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.61 E-value=5.9e-16 Score=140.24 Aligned_cols=212 Identities=13% Similarity=0.174 Sum_probs=130.9
Q ss_pred CcccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecccCCCCcEEEEeehHHHHHHHHHhccCCCCCChhHHhhccH
Q 016866 53 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 132 (381)
Q Consensus 53 ~~~~d~~p~s~~vi~ld~~~~v~~A~~~l~~~~i~~~pV~d~~~~~~vGilt~~D~~~il~~~~~~~~~~~~~~l~~~~i 132 (381)
.++.|+|- .++++++++.++.+|++.|.++++..+||+|++ ++++|++|..|+++.+..... .........++
T Consensus 7 ~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~----~~~~~~~~~~~ 79 (245)
T 3l2b_A 7 LKVEDLEM--DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWD----SNILAKSATSL 79 (245)
T ss_dssp CBGGGSCC--BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCC----TTHHHHTTCCH
T ss_pred CcHHHhcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhh----hhhhhhccCCH
Confidence 46778884 468999999999999999999999999999975 569999999999987642211 00011111122
Q ss_pred HHHHHHHHhh--hc-cc--cCCC------------CCCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCC-
Q 016866 133 SAWKVGKLQL--NL-KR--QMDG------------NGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGS- 194 (381)
Q Consensus 133 ~~~~~~~~~~--~~-~~--~~~~------------~g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~- 194 (381)
..+.+..... .. .. ...+ ........++.+. .-.++...+.+.+++.+++++.......
T Consensus 80 ~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvg---dr~~~~~~~i~~~~~~liit~~~~~~~~v 156 (245)
T 3l2b_A 80 DNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAG---DRAEIQAELIELKVSLLIVTGGHTPSKEI 156 (245)
T ss_dssp HHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEEC---SCHHHHHHHHHTTCSEEEECTTCCCCHHH
T ss_pred HHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEEC---CCHHHHHHHHHcCCCEEEECCCCCCCHHH
Confidence 2222111000 00 00 0000 0001123333332 2378888999999999998854211110
Q ss_pred -----ccceEEEeehhhHHHHHhhhcccCCCCCccccCccccccccccccccccccC-CCceEecCCCCHHHHHHHHHhC
Q 016866 195 -----CQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANG-RPFAMLRPTASLGSALALLVQA 268 (381)
Q Consensus 195 -----~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig~~~~~v~~~~~-~~~~~v~~~~~l~~a~~~m~~~ 268 (381)
...+-.+.+..|........ .....++++|. +++.++.+++++.+|+++|.++
T Consensus 157 ~~~a~~~~~~~i~t~~d~~~~~~~~---------------------~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~ 215 (245)
T 3l2b_A 157 IELAKKNNITVITTPHDSFTASRLI---------------------VQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSET 215 (245)
T ss_dssp HHHHHHHTCEEEECSSCHHHHHHHG---------------------GGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEeCCChHHHHHHH---------------------hcCCceeeEecCCccEEECCCCcHHHHHHHHHhc
Confidence 00123344444443322110 01124566798 8999999999999999999999
Q ss_pred CCcEEEEEcCCCcEEEEEeHHHHHHHH
Q 016866 269 DVSSIPIVDDNDSLLDIYSRSDITALA 295 (381)
Q Consensus 269 ~~~~lpVvd~~g~lvGiis~~Di~~l~ 295 (381)
+++++||+|++|+++|++|.+|+++..
T Consensus 216 ~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 216 RYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp CCSEEEEECTTCBEEEEEECC------
T ss_pred CCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 999999999999999999999998754
No 76
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.61 E-value=3.4e-15 Score=121.70 Aligned_cols=115 Identities=9% Similarity=0.126 Sum_probs=96.0
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccccccc
Q 016866 157 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 236 (381)
Q Consensus 157 ~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig~ 236 (381)
.+++++.+++++.+|++.|.+++++++||+++ ..| +++|++|.+|+++++..... ...
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~--~~~---~lvGivt~~dl~~~~~~~~~-------~~~---------- 69 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRD--SLD---DAISMLRVREAYRLMTEKKE-------FTK---------- 69 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEESS--SGG---GEEEEEEHHHHHHHHTSSSC-------CCH----------
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcC--CCC---cEEEEEEHHHHHHHHhccCc-------cch----------
Confidence 46889999999999999999999999999953 246 89999999999997643110 001
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 237 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 237 ~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
..++++| +++.++.+++++.+|++.|.+++++.+||+|++|+++|++|..|+++.+.
T Consensus 70 --~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 70 --EIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp --HHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred --hhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 1334557 56789999999999999999999999999999999999999999998655
No 77
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.61 E-value=7.6e-15 Score=123.50 Aligned_cols=131 Identities=14% Similarity=0.196 Sum_probs=102.3
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcce-EEEEecCCCCCCccceEEEeehhhHHHHHhhhccc-CCCCCccccCccc
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVAT-VPIIHSTGPAGSCQEILYLASLSDILKCICRHFKH-SSSSLPILQQPVS 230 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~-lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~-~~~~~~~~~~~i~ 230 (381)
.+|.++++++.+++++.+|++.|.+++++. +||+|+ + +++|++|..|+++++...+.. ... ...+.....
T Consensus 20 ~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~----~---~~vGivt~~dl~~~~~~~~~~~~~~-~~~~~~~~~ 91 (157)
T 1o50_A 20 KLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD----N---KLVGMIPVMHLLKVSGFHFFGFIPK-EELIRSSMK 91 (157)
T ss_dssp TSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET----T---EEEEEEEHHHHHHHHHHHHHCCCC--------CCC
T ss_pred hcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC----C---EEEEEEEHHHHHHHHhhhHHhhhcc-HHHHHHHHH
Confidence 478899999999999999999999999999 999975 3 699999999999976532100 000 000000000
Q ss_pred cccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 231 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 231 ~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
......++++|.+ ++++.+++++.+|++.|.+++++++||+|++|+++|+||..|+++.+.
T Consensus 92 ----~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 92 ----RLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp ----CCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred ----HHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 0122356677988 999999999999999999999999999998899999999999998665
No 78
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.61 E-value=3.2e-15 Score=122.70 Aligned_cols=118 Identities=21% Similarity=0.387 Sum_probs=100.0
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhH-HHHHhhhcccCCCCCccccCcccc
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI-LKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~di-l~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
.+|.++++++.+++++.+|++.|.+++.+.+||+|+ +| +++|++|..|+ ++++.... ...
T Consensus 12 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~--------~~~----- 72 (138)
T 2p9m_A 12 DVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD---EN---KVIGIVTTTDIGYNLIRDKY--------TLE----- 72 (138)
T ss_dssp GTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT---TC---BEEEEEEHHHHHHHHTTTCC--------CSS-----
T ss_pred HhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC---CC---eEEEEEEHHHHHHHHHhhcc--------cCC-----
Confidence 368888999999999999999999999999999975 56 89999999999 87654210 011
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCC-----CcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 232 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQAD-----VSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~-----~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
..++++|.+++.++.+++++.++++.|.+++ ++.+||+|++|+++|++|..|+++.+.
T Consensus 73 -------~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 73 -------TTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp -------CBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -------cCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 2345568888999999999999999999999 999999998999999999999998654
No 79
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.61 E-value=5.5e-15 Score=123.22 Aligned_cols=122 Identities=15% Similarity=0.168 Sum_probs=100.0
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccc
Q 016866 154 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 154 ~~~--~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
+|. .+++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++...... ...
T Consensus 20 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~----------~~~- 82 (150)
T 3lqn_A 20 LMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP---MY---KLHGLISTAMILDGILGLERI----------EFE- 82 (150)
T ss_dssp HSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHTBCSSSB----------CGG-
T ss_pred cccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC---CC---CEEEEEEHHHHHHHHHhhccc----------chh-
Confidence 455 46899999999999999999999999999975 57 899999999999977532110 000
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 232 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
......++++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|++|..|+++.+..
T Consensus 83 ---~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 83 ---RLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp ---GGGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ---HHhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 001234566788899999999999999999999987 9999999999999999999997653
No 80
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=8.6e-15 Score=124.29 Aligned_cols=116 Identities=18% Similarity=0.273 Sum_probs=99.6
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccccccc
Q 016866 157 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 236 (381)
Q Consensus 157 ~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig~ 236 (381)
.+++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++...... ...
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~------~~~---------- 92 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA---DG---VVLGIFTERDLVKAVAGQGAA------SLQ---------- 92 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHHHHGGG------GGT----------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---eEEEEEEHHHHHHHHHhcCCc------ccc----------
Confidence 36889999999999999999999999999975 57 899999999999987654211 011
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 237 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 237 ~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
..++++|.++++++.+++++.+|++.|.+++++++||+|+ |+++|++|..|+++.+..
T Consensus 93 --~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 93 --QSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp --SBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred --CCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 2345568889999999999999999999999999999998 999999999999997653
No 81
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.60 E-value=2.6e-15 Score=125.24 Aligned_cols=115 Identities=16% Similarity=0.229 Sum_probs=98.2
Q ss_pred CCCCC--CceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccc
Q 016866 153 RPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 230 (381)
Q Consensus 153 ~~~~~--~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~ 230 (381)
.+|.+ +++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++..... ...
T Consensus 32 dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~-------~~~---- 94 (149)
T 3k2v_A 32 DIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD---DM---NIIGIFTDGDLRRVFDTGVD-------MRD---- 94 (149)
T ss_dssp GTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT---TC---BEEEEEEHHHHHHHHCSSSC-------CTT----
T ss_pred HHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---cEEEEecHHHHHHHHhcCCC-------ccc----
Confidence 37888 8999999999999999999999999999975 57 89999999999987653211 112
Q ss_pred cccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHH
Q 016866 231 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 293 (381)
Q Consensus 231 ~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~ 293 (381)
..++++|.+++.++.+++++.+|++.|.+++++.+||+|++ +++|++|..|+++
T Consensus 95 --------~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 95 --------ASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp --------CBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred --------CcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 23455588889999999999999999999999999999965 9999999999864
No 82
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.59 E-value=1.1e-14 Score=122.31 Aligned_cols=124 Identities=15% Similarity=0.217 Sum_probs=101.2
Q ss_pred CCCCCC--CceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcc
Q 016866 152 GRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 229 (381)
Q Consensus 152 g~~~~~--~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i 229 (381)
+.+|.. +++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++...... . .
T Consensus 14 ~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~--------~--~ 77 (157)
T 2emq_A 14 KPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT---SY---KLHGLISMTMMMDAILGLERI--------E--F 77 (157)
T ss_dssp TTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT---TC---CEEEEEEHHHHHHHSBCSSSB--------C--G
T ss_pred HhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC---CC---CEEEEeeHHHHHHHHhccccc--------c--h
Confidence 446775 8899999999999999999999999999975 57 899999999999866431100 0 0
Q ss_pred ccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 230 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 230 ~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
. ......+.++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|++|.+|+++.+..
T Consensus 78 ~----~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 78 E----RLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp G----GGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred H----HhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 0 011234566788899999999999999999999987 9999988999999999999987653
No 83
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.59 E-value=6.9e-15 Score=127.24 Aligned_cols=121 Identities=13% Similarity=0.126 Sum_probs=102.9
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccc
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 232 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l 232 (381)
.+|.++++++.+++++.+|+++|.+++++++||+++ +| +++|++|..|+++++..... .
T Consensus 13 ~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~---~g---~~vGivt~~dl~~~~~~~~~------~--------- 71 (184)
T 1pvm_A 13 KIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD---NG---NDVGLLSERSIIKRFIPRNK------K--------- 71 (184)
T ss_dssp GTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT---TS---CEEEEEEHHHHHHHTGGGCC------C---------
T ss_pred HhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHhhccc------C---------
Confidence 378889999999999999999999999999999975 46 89999999999986643210 0
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 233 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 233 ~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
.....++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 72 ---~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 72 ---PDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp ---GGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred ---cccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 11124556688899999999999999999999999999999988999999999999986543
No 84
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.59 E-value=1e-14 Score=121.99 Aligned_cols=116 Identities=19% Similarity=0.224 Sum_probs=97.2
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccccccc
Q 016866 157 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 236 (381)
Q Consensus 157 ~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig~ 236 (381)
++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++..... .....+
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~vGivt~~dl~~~~~~~~~------~~~~~~-------- 88 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE---KG---RVVDIYSKFDVINLAAEKTY------NNLDVS-------- 88 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT---TS---BEEEEEEHHHHHHHHHCSSC------CCTTSB--------
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECC---CC---cEEEEEeHHHHHHHhcchhh------hhhcch--------
Confidence 67889999999999999999999999999975 57 89999999999987653210 011222
Q ss_pred cccccccccC------CCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 237 WVPRIGEANG------RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 237 ~~~~v~~~~~------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
+.++|. +++.++.+++++.+|++.|.+++++++||+|++|+++|++|..|+++.+.
T Consensus 89 ----v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 89 ----VTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp ----GGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred ----HHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 334454 67889999999999999999999999999998899999999999998653
No 85
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.59 E-value=7.2e-15 Score=121.31 Aligned_cols=119 Identities=22% Similarity=0.231 Sum_probs=97.3
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
.|.++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++..... .....+
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~------~~~~~~----- 78 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NG---YLINVYEAYDVLGLIKGGIY------NDLSLS----- 78 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHTC----------CCSB-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC---CC---cEEEEEcHHHHHHHhccccc------ccCCcc-----
Confidence 57788999999999999999999999999999975 47 89999999999987653210 011222
Q ss_pred ccccccccccccCC------CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 234 LGTWVPRIGEANGR------PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 234 ig~~~~~v~~~~~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
++++|.+ ++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++.+.
T Consensus 79 -------v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 79 -------VGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp -------HHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -------HHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 3344543 6889999999999999999999999999998899999999999998654
No 86
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.59 E-value=4.8e-15 Score=121.29 Aligned_cols=114 Identities=18% Similarity=0.272 Sum_probs=96.8
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccccccc
Q 016866 157 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 236 (381)
Q Consensus 157 ~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig~ 236 (381)
++++++.+++++.+|++.|.+++++.+||+| +| +++|++|..|+++.+..... . .
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~------~------------~ 71 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK----DE---KLVGILTERDFSRKSYLLDK------P------------V 71 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHGGGSSS------C------------G
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEehHHHHHHHHHcCC------C------------c
Confidence 6889999999999999999999999999996 36 89999999999874432110 0 0
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 237 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 237 ~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
....++++|.+++.++.+++++.+|++.|.+++++.+||+| +|+++|++|.+|+++.+.
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 72 KDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 12245566888999999999999999999999999999999 799999999999998655
No 87
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.59 E-value=1.2e-14 Score=119.98 Aligned_cols=119 Identities=18% Similarity=0.265 Sum_probs=99.7
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccc
Q 016866 153 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 232 (381)
Q Consensus 153 ~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l 232 (381)
.+|.++++++.+++++.+|++.|.+++++.+||+|+ ++ ..+++|++|..|+++++..... ..
T Consensus 9 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~-~~~~~Givt~~dl~~~~~~~~~--------~~------ 70 (141)
T 2rih_A 9 ELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR---DN-PKRPVAVVSERDILRAVAQRLD--------LD------ 70 (141)
T ss_dssp GGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET---TE-EEEEEEEEEHHHHHHHHHTTCC--------TT------
T ss_pred HHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC---CC-cceeEEEEEHHHHHHHHhcCCC--------CC------
Confidence 368889999999999999999999999999999975 11 1159999999999987653210 11
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 233 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 233 ~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
..++++|.+++.++.++ ++.+|++.|.+++++.+||+|++|+++|++|.+|+++...
T Consensus 71 ------~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 71 ------GPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp ------SBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred ------CCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 23455688899999999 9999999999999999999998999999999999987443
No 88
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.59 E-value=9.3e-15 Score=125.32 Aligned_cols=118 Identities=7% Similarity=0.048 Sum_probs=99.0
Q ss_pred CCCCCC--CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCc
Q 016866 151 NGRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 228 (381)
Q Consensus 151 ~g~~~~--~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~ 228 (381)
++.+|. .+++++.+++++.+|++.|.+++++++||+++ ..+ +++|++|.+|+++++.... ..+
T Consensus 38 v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~Dl~~~~~~~~----------~~~ 102 (173)
T 3ocm_A 38 IRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG--SLD---EVVGIGRAKDLVADLITEG----------RVR 102 (173)
T ss_dssp STTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------SCC
T ss_pred HHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---CEEEEEEHHHHHHHHhcCC----------cch
Confidence 455785 46899999999999999999999999999965 226 7999999999999765321 111
Q ss_pred cccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 229 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 229 i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
+ . |.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..|++..+..
T Consensus 103 v------------~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 103 R------------N--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp G------------G--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHC
T ss_pred h------------H--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhC
Confidence 2 2 22467899999999999999999999999999999999999999999997664
No 89
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.58 E-value=5.2e-15 Score=124.00 Aligned_cols=128 Identities=15% Similarity=0.227 Sum_probs=105.3
Q ss_pred hhhCcccccCCCCccEEEEcCCCCHHHHHHHHHHcCCCeeecc-cCCCCcEEEEeehHHHHHHHHHhccCCCCCChhHHh
Q 016866 50 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLW-DDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 128 (381)
Q Consensus 50 l~~~~~~d~~p~s~~vi~ld~~~~v~~A~~~l~~~~i~~~pV~-d~~~~~~vGilt~~D~~~il~~~~~~~~~~~~~~l~ 128 (381)
|...++.++|-...++++++++.|+.+|++.|.++++..+||+ |.+.++++|++|..|++..+..-. ..
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~----~~------ 86 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD----KA------ 86 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT----TS------
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC----CC------
Confidence 3567788888554579999999999999999999999999999 655567999999999987664221 00
Q ss_pred hccHHHHHHHHHhhhccccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHH
Q 016866 129 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 208 (381)
Q Consensus 129 ~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil 208 (381)
++ +.+| ++++++.+++++.+|++.|.+++++.+||+|+ .| +++|++|..|++
T Consensus 87 --~v-------------------~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~---~g---~~vGivt~~dil 138 (153)
T 3oco_A 87 --KI-------------------STIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE---YG---GTSGIITDKDVY 138 (153)
T ss_dssp --BG-------------------GGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT---TS---CEEEEECHHHHH
T ss_pred --cH-------------------HHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC---CC---CEEEEeeHHHHH
Confidence 11 1167 78999999999999999999999999999976 57 899999999999
Q ss_pred HHHhhhc
Q 016866 209 KCICRHF 215 (381)
Q Consensus 209 ~~l~~~~ 215 (381)
+.+....
T Consensus 139 ~~l~~~~ 145 (153)
T 3oco_A 139 EELFGNL 145 (153)
T ss_dssp HHHHC--
T ss_pred HHHhccC
Confidence 9887543
No 90
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.58 E-value=3e-15 Score=125.70 Aligned_cols=121 Identities=17% Similarity=0.199 Sum_probs=99.7
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccc
Q 016866 154 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 154 ~~~--~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
+|. .+++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++....... .....
T Consensus 20 im~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~dl~~~~~~~~~~~---~~~~~----- 85 (156)
T 3ctu_A 20 FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMAD----- 85 (156)
T ss_dssp GEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTT-----
T ss_pred HcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC---CC---EEEEEEcHHHHHHHHHhccccc---ccccc-----
Confidence 566 67899999999999999999999999999975 57 8999999999999876421100 00011
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 232 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
..++++|.++++++.+++++.+|++.|.+++ ++||+|++|+++|++|.+|+++.+.+
T Consensus 86 -------~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 86 -------TDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp -------SBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHH
T ss_pred -------CcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 2455668889999999999999999999886 79999999999999999999997664
No 91
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.57 E-value=4.4e-15 Score=121.13 Aligned_cols=117 Identities=15% Similarity=0.253 Sum_probs=98.2
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHH-HHhhhcccCCCCCccccCccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICRHFKHSSSSLPILQQPVSSI 232 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~-~l~~~~~~~~~~~~~~~~~i~~l 232 (381)
+|.++++++.+++++.+|++.|.+++.+.+||+|+ +| +++|++|..|+++ ++.....
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~---------------- 70 (133)
T 1y5h_A 13 IMNAGVTCVGEHETLTAAAQYMREHDIGALPICGD---DD---RLHGMLTDRDIVIKGLAAGLD---------------- 70 (133)
T ss_dssp HSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG---GG---BEEEEEEHHHHHHTTGGGTCC----------------
T ss_pred HhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC---CC---eEEEEEeHHHHHHHHHhcCCC----------------
Confidence 46678899999999999999999999999999975 46 8999999999984 4432110
Q ss_pred cccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 233 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 233 ~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
.....++++|.+++.++.+++++.+|++.|.+++.+++||+|+ |+++|++|..|+++.+.
T Consensus 71 ---~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 71 ---PNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLP 130 (133)
T ss_dssp ---TTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC
T ss_pred ---ccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 0112455668889999999999999999999999999999997 99999999999998543
No 92
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.57 E-value=5.6e-15 Score=124.33 Aligned_cols=114 Identities=14% Similarity=0.146 Sum_probs=95.5
Q ss_pred CCCCCCC--CceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCc
Q 016866 151 NGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 228 (381)
Q Consensus 151 ~g~~~~~--~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~ 228 (381)
++.+|.+ +++++.+++++.+|++.|.+++++++||+++ ..+ +++|++|.+|+++++... ...
T Consensus 40 v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~----------~~~- 103 (156)
T 3oi8_A 40 VRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE--DKD---EVLGILHAKDLLKYMFNP----------EQF- 103 (156)
T ss_dssp GGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGSSCG----------GGC-
T ss_pred HhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHcC----------Ccc-
Confidence 3447875 7899999999999999999999999999965 235 799999999998854321 111
Q ss_pred cccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHH
Q 016866 229 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT 292 (381)
Q Consensus 229 i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~ 292 (381)
.++++|.+ +.++.+++++.+|++.|.+++++.+||+|++|+++|++|..|++
T Consensus 104 -----------~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 104 -----------HLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp -----------CHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred -----------cHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 34455755 78999999999999999999999999999999999999999985
No 93
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.56 E-value=1.3e-14 Score=145.68 Aligned_cols=124 Identities=19% Similarity=0.230 Sum_probs=105.6
Q ss_pred ccccccccCCCceEecCC-CCHHHHHHHHHhCCCcEEEEEc-CCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHh
Q 016866 238 VPRIGEANGRPFAMLRPT-ASLGSALALLVQADVSSIPIVD-DNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 315 (381)
Q Consensus 238 ~~~v~~~~~~~~~~v~~~-~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~ 315 (381)
..+++++|.++++++.++ +++.+|+++|.+++++++||+| ++|+++|+||.+||++.+..+... .+.++.+
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~----~~~~V~~--- 455 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQ----QSDPAIK--- 455 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCC----TTSBGGG---
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCc----CCCcHHH---
Confidence 347889999999999999 9999999999999999999999 789999999999999865532111 1345655
Q ss_pred cCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCC---CCeEEEEEehHHHHHHhhc
Q 016866 316 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAG---SKRVEGIISLSDVFRFLLG 380 (381)
Q Consensus 316 ~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~---~~~liGiIs~~DIl~~l~~ 380 (381)
+|.++++++.+++++.++++.|.++++ +||||++ +|+++||||..||++++..
T Consensus 456 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 456 ----------ALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp ----------GEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred ----------HhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHh
Confidence 788889999999999999999987775 7999942 3899999999999999864
No 94
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.54 E-value=6.2e-14 Score=126.96 Aligned_cols=141 Identities=12% Similarity=0.134 Sum_probs=103.8
Q ss_pred CCCCCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCC----------
Q 016866 151 NGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS---------- 220 (381)
Q Consensus 151 ~g~~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~---------- 220 (381)
++.+|.++++++.+++++.+|+++|.+++++++||+|+ .+++ +++|+||..||++++.........
T Consensus 15 v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~ 90 (250)
T 2d4z_A 15 VGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADE 90 (250)
T ss_dssp TTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCC
T ss_pred hHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcccc
Confidence 44589999999999999999999999999999999974 2235 799999999999987644211000
Q ss_pred -----------------CCccccCc--------------------------------------------------ccc--
Q 016866 221 -----------------SLPILQQP--------------------------------------------------VSS-- 231 (381)
Q Consensus 221 -----------------~~~~~~~~--------------------------------------------------i~~-- 231 (381)
...+.... ...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (250)
T 2d4z_A 91 EGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEM 170 (250)
T ss_dssp C---------------------------------------------------------------------------CCSC
T ss_pred cccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccc
Confidence 00000000 000
Q ss_pred cc---ccccc-----ccc--c-cccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 232 IQ---LGTWV-----PRI--G-EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 232 l~---ig~~~-----~~v--~-~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
+. +..|. ..+ . .+|.+.++++.+++++.++..+|...|++++||++ .|+++|+||+.|+++++.
T Consensus 171 i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 171 LTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp CBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 00 00110 112 1 35888899999999999999999999999999998 799999999999999776
No 95
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.54 E-value=5.8e-14 Score=129.60 Aligned_cols=121 Identities=17% Similarity=0.245 Sum_probs=103.5
Q ss_pred ccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhC-----CcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCC
Q 016866 146 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 220 (381)
Q Consensus 146 ~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~-----~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~ 220 (381)
+....+|.+|..+++++.+++++.+|++.|.++ +++++||+|+ +| +++|++|.+|++...
T Consensus 132 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~~--------- 196 (278)
T 2yvy_A 132 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVAD--------- 196 (278)
T ss_dssp SCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT---TC---BEEEEEEHHHHHHSC---------
T ss_pred CCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECC---CC---CEEEEEEHHHHhcCC---------
Confidence 445567789999999999999999999999986 7899999975 56 899999999998620
Q ss_pred CCccccCccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 221 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 221 ~~~~~~~~i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
... .++++|.++++++++++++.+|++.|.+++.+.+||||++|+++|+||..|++..+.+
T Consensus 197 ----~~~------------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 197 ----PRT------------RVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp ----TTC------------BSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred ----CCC------------cHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 112 3455588889999999999999999999999999999999999999999999986653
No 96
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.54 E-value=1.9e-14 Score=123.52 Aligned_cols=138 Identities=18% Similarity=0.258 Sum_probs=101.1
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccC--CCCCccccCcc
Q 016866 154 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHS--SSSLPILQQPV 229 (381)
Q Consensus 154 ~~~~--~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~--~~~~~~~~~~i 229 (381)
+|.+ +++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|++++........ ....+......
T Consensus 9 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 9 FMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD---NW---TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp HSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHTCC-------------------CC
T ss_pred hcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---eEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4565 7899999999999999999999999999976 57 8999999999986432111000 00000000000
Q ss_pred c------cccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 230 S------SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 230 ~------~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
. .+........++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|+++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 0 0000112235677898889999999999999999999999999999999999999999999996653
No 97
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.53 E-value=2.6e-14 Score=120.42 Aligned_cols=122 Identities=9% Similarity=0.105 Sum_probs=99.3
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccc
Q 016866 154 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 231 (381)
Q Consensus 154 ~~~~--~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~ 231 (381)
+|.+ +++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++...... ....
T Consensus 19 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~----------~~~~ 82 (159)
T 1yav_A 19 FMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP---SY---RLHGLIGTNMIMNSIFGLERI----------EFEK 82 (159)
T ss_dssp HSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT---TC---BEEEEEEHHHHHHHHBCSSSB----------CGGG
T ss_pred HhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---CEEEEeEHHHHHHHhhhhccc----------chhh
Confidence 4555 7889999999999999999999999999976 57 899999999999876432100 0000
Q ss_pred ccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 232 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 232 l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
.....+.++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|++|.+|+++.+..
T Consensus 83 ----~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 83 ----LDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp ----TTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ----hccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 01124566688899999999999999999999877 9999989999999999999997653
No 98
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.53 E-value=6.2e-14 Score=117.77 Aligned_cols=116 Identities=13% Similarity=0.237 Sum_probs=98.6
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccccccc
Q 016866 157 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 236 (381)
Q Consensus 157 ~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ig~ 236 (381)
++++++.+++++.+|++.|.+++++.+||.+ +| +++|++|..|+++++...... .
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~----~~---~~~Givt~~dl~~~~~~~~~~------~------------ 75 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVD----GD---DIAGIVTERDYARKVVLQERS------S------------ 75 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEES----SS---SEEEEEEHHHHHHHSGGGTCC------S------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEee----CC---EEEEEEEHHHHHHHHHhccCC------c------------
Confidence 6789999999999999999999999999963 46 899999999999976543211 0
Q ss_pred cccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhh
Q 016866 237 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 298 (381)
Q Consensus 237 ~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~ 298 (381)
....++++|.+++.++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++.+...
T Consensus 76 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 76 KATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp SSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred cccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 11245566888999999999999999999999999999999 79999999999999977643
No 99
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.53 E-value=3.1e-14 Score=140.86 Aligned_cols=117 Identities=18% Similarity=0.269 Sum_probs=103.5
Q ss_pred cccccccCCCceEecCCCCHHHHHHHHHhC-----CCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHH
Q 016866 239 PRIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 313 (381)
Q Consensus 239 ~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~ 313 (381)
.+++++|.++++++++++++.+|++.|.++ +++++||+|++++++|+++.+|++... .+.++.+
T Consensus 155 ~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~~----------~~~~v~d- 223 (473)
T 2zy9_A 155 DEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAE- 223 (473)
T ss_dssp TBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHSC----------TTSBGGG-
T ss_pred CCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcCC----------CCCcHHH-
Confidence 356777999999999999999999999986 589999999899999999999998621 1345655
Q ss_pred HhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 314 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 314 l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.++++++++++++.++++.|.+++.+.+|||| ++|+++|+||..|+++.+.
T Consensus 224 ------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD-e~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 224 ------------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp ------------TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------------HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc-CCCEEEEEEehHhhHHHHH
Confidence 7877899999999999999999999999999999 4799999999999998874
No 100
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.53 E-value=4.7e-14 Score=130.77 Aligned_cols=121 Identities=14% Similarity=0.186 Sum_probs=104.5
Q ss_pred ccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhC-----CcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCC
Q 016866 146 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 220 (381)
Q Consensus 146 ~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~-----~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~ 220 (381)
+....+|.+|.++++++.+++++.+|++.|.++ +++++||+|+ +| +++|++|..|+++..
T Consensus 134 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~---~~---~lvGivt~~dll~~~--------- 198 (286)
T 2oux_A 134 YEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ---EN---HLVGVISLRDLIVND--------- 198 (286)
T ss_dssp SCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT---TC---BEEEEEEHHHHTTSC---------
T ss_pred CChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC---CC---eEEEEEEHHHHHcCC---------
Confidence 445556778999999999999999999999987 8899999975 57 899999999997620
Q ss_pred CCccccCccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 221 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 221 ~~~~~~~~i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
.. ..++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|+||..|++..+.+
T Consensus 199 ----~~------------~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 ----DD------------TLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp ----TT------------SBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ----CC------------CcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 11 23455688899999999999999999999999999999999999999999999997654
No 101
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.52 E-value=8.3e-14 Score=117.55 Aligned_cols=124 Identities=13% Similarity=0.139 Sum_probs=98.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
+|.++++++.+++++.+|++.|.+++++++||+|++ ++| +++|++|..|+++++....... .....
T Consensus 18 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~-~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~------- 83 (164)
T 2pfi_A 18 FMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVEST-ESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQ------- 83 (164)
T ss_dssp HCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCT-TTC---BEEEEEEHHHHHHHHHC----------CCC-------
T ss_pred HcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecC-CCC---EEEEEEEHHHHHHHHHhhcccc---CCccc-------
Confidence 577889999999999999999999999999999631 246 8999999999998775322110 00011
Q ss_pred ccccccccccccCCC------ceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 234 LGTWVPRIGEANGRP------FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 234 ig~~~~~v~~~~~~~------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
..+.++|..+ +.++.+++++.+|++.|.+++++++||+| +|+++|++|.+|+++.+.+
T Consensus 84 -----~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 84 -----QCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp -----CBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred -----chhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 1233445444 78999999999999999999999999999 7999999999999987653
No 102
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.52 E-value=4.6e-14 Score=121.69 Aligned_cols=134 Identities=10% Similarity=0.128 Sum_probs=100.0
Q ss_pred ceEe--CCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCC----CccccCccccc
Q 016866 159 LVQA--GPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSS----LPILQQPVSSI 232 (381)
Q Consensus 159 ~i~v--~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~----~~~~~~~i~~l 232 (381)
++++ .+++++.+|++.|.+++++.+||+++ .++| +++|++|..|+++++.......... ...+.....+.
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~-d~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVS-RESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEE-CCCC---eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 7788 99999999999999999999999931 1157 8999999999999876532110000 00000000000
Q ss_pred c-ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 233 Q-LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 233 ~-ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
. .......++++|.+++.++.+++++.+|++.|.+++++++||+| +|+++|+||.+|+++.+..
T Consensus 101 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 101 PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 0 00122356778988999999999999999999999999999999 8999999999999997653
No 103
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.50 E-value=2.5e-13 Score=134.39 Aligned_cols=121 Identities=17% Similarity=0.245 Sum_probs=105.2
Q ss_pred ccCCCCCCCCCCCceEeCCCCCHHHHHHHHHhC-----CcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCC
Q 016866 146 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 220 (381)
Q Consensus 146 ~~~~~~g~~~~~~~i~v~~~~sl~~a~~~m~~~-----~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~ 220 (381)
+....+|.+|..+++++.+++++.+|++.|.++ +++++||+|+ ++ +++|++|.+|++..
T Consensus 152 ~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~---~~---~lvGiVt~~Dll~~---------- 215 (473)
T 2zy9_A 152 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA---------- 215 (473)
T ss_dssp SCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT---TS---BEEEEEEHHHHHHS----------
T ss_pred CCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC---CC---cEEEEEEHHHHhcC----------
Confidence 566778889999999999999999999999886 5899999975 46 89999999999862
Q ss_pred CCccccCccccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 221 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 221 ~~~~~~~~i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
..+. .++++|.++++++++++++.++++.|.+++...+||+|++|+++|+||..|+++...+
T Consensus 216 ---~~~~------------~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 216 ---DPRT------------RVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp ---CTTS------------BGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ---CCCC------------cHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 0122 3455588899999999999999999999999999999999999999999999997653
No 104
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.49 E-value=1.1e-14 Score=149.05 Aligned_cols=139 Identities=16% Similarity=0.073 Sum_probs=103.1
Q ss_pred cccccccC--CCceEecCCCCHHHHHHHHH-hCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhc-ccc---------c
Q 016866 239 PRIGEANG--RPFAMLRPTASLGSALALLV-QADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYA-QIH---------L 305 (381)
Q Consensus 239 ~~v~~~~~--~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~-~~~---------~ 305 (381)
.+++++|. +++.++++++++.++.+.|. +++++++||+|++|+++|+++++|+.+........ ... .
T Consensus 453 ~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~ 532 (632)
T 3org_A 453 MTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLL 532 (632)
T ss_dssp SBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC-----------------
T ss_pred CcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceecc
Confidence 46788999 89999999999999999999 79999999999999999999999999865432100 000 0
Q ss_pred cccc----HHHHHhcC---------------CCCCCCc-ccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeE
Q 016866 306 DEMN----IHQALQLG---------------QDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRV 365 (381)
Q Consensus 306 ~~~~----v~~~l~~~---------------~~~~~~~-~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~l 365 (381)
.... +....... .++..+. ++|++++.++++++++.++++.|.+++++++||+| +|++
T Consensus 533 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve--~G~l 610 (632)
T 3org_A 533 DAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE--RGKL 610 (632)
T ss_dssp --------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE--TTEE
T ss_pred CHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE--CCEE
Confidence 0000 00000000 0011112 28999999999999999999999999999999996 5899
Q ss_pred EEEEehHHHHHHhh
Q 016866 366 EGIISLSDVFRFLL 379 (381)
Q Consensus 366 iGiIs~~DIl~~l~ 379 (381)
+|+||++||++++.
T Consensus 611 vGIVT~~Dll~~~~ 624 (632)
T 3org_A 611 VGIVEREDVAYGYS 624 (632)
T ss_dssp EEEEEGGGTEECCC
T ss_pred EEEEehhhHHHHHh
Confidence 99999999987653
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.46 E-value=3.2e-13 Score=134.46 Aligned_cols=114 Identities=16% Similarity=0.269 Sum_probs=100.4
Q ss_pred cccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcC--CCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCC
Q 016866 243 EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD--NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDA 320 (381)
Q Consensus 243 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~ 320 (381)
+.|..+++++.+++++.+++++|.+++++++||+|+ +++++|++|.+|+... . . .+.++.+
T Consensus 117 ~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~---~---~---~~~~V~~-------- 179 (511)
T 3usb_A 117 SGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI---Q---D---YSIKISD-------- 179 (511)
T ss_dssp SCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC---C---C---SSSBHHH--------
T ss_pred cccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh---c---c---CCCcHHH--------
Confidence 346678899999999999999999999999999998 8999999999999641 1 1 1467777
Q ss_pred CCCcccCCC-cceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 321 NPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 321 ~~~~~~m~~-~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.+ +++++++++++.++++.|.+++++.+|||| ++|+++|+||..||++.+.
T Consensus 180 -----vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVD-e~g~l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 180 -----VMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVD-NNGVLQGLITIKDIEKVIE 233 (511)
T ss_dssp -----HCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred -----hcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEe-CCCCEeeeccHHHHHHhhh
Confidence 6776 899999999999999999999999999999 4799999999999999863
No 106
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.40 E-value=5.2e-12 Score=125.75 Aligned_cols=156 Identities=12% Similarity=0.151 Sum_probs=118.8
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
.|..+++++.+++++.+|+++|.+++++++||+|+. .++ +++|++|.+|++. . .....
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~---~lvGiVt~rDl~~-------~-----~~~~~------ 175 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DER---KLVGIITNRDMRF-------I-----QDYSI------ 175 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTC---BEEEEEEHHHHTT-------C-----CCSSS------
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCC---EEEEEEEehHhhh-------h-----ccCCC------
Confidence 577889999999999999999999999999999641 135 8999999999954 0 01122
Q ss_pred ccccccccccccCC-CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHH
Q 016866 234 LGTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 312 (381)
Q Consensus 234 ig~~~~~v~~~~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~ 312 (381)
.+.++|.+ ++++++++.++.+++++|.+++++.+||||++|+++|++|..|+++....... +.+
T Consensus 176 ------~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a---------~~D 240 (511)
T 3usb_A 176 ------KISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNS---------AKD 240 (511)
T ss_dssp ------BHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTC---------CBC
T ss_pred ------cHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccc---------hhh
Confidence 34455887 89999999999999999999999999999999999999999999997653111 101
Q ss_pred HHhcCCCCCCCcccCCCc--ceEEcCCCCHHHHHHHHHhCCCCEEEEEe
Q 016866 313 ALQLGQDANPSLGFNGQR--CQMCLRSDPLHKVMERLANPGVRRLVIVE 359 (381)
Q Consensus 313 ~l~~~~~~~~~~~~m~~~--~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd 359 (381)
.+.+- ...+.......+.++.|.+.+++.++|-.
T Consensus 241 -------------~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 241 -------------KQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp -------------TTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred -------------hccceeeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 01111 22344444556667788888998876654
No 107
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.40 E-value=1.8e-12 Score=129.13 Aligned_cols=115 Identities=19% Similarity=0.288 Sum_probs=100.9
Q ss_pred ccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEc--CCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCC
Q 016866 242 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVD--DNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 319 (381)
Q Consensus 242 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~ 319 (381)
.++|..+++++.+++++.++++.|.+++++++||+| ++++++|++|.+|++... . .+.++.+
T Consensus 93 ~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~------~---~~~~v~~------- 156 (491)
T 1zfj_A 93 ENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS------D---YNAPISE------- 156 (491)
T ss_dssp TTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS------C---SSSBTTT-------
T ss_pred HhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc------c---CCCcHHH-------
Confidence 345778899999999999999999999999999999 789999999999998631 0 1244444
Q ss_pred CCCCcccCCC-cceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 320 ANPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 320 ~~~~~~~m~~-~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.+ +++++++++++.++++.|.+++++++|||| ++++++|+||..||++.+.
T Consensus 157 ------im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd-~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 157 ------HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD-NSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp ------SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEEHHHHHHHHh
Confidence 7877 889999999999999999999999999999 4799999999999999875
No 108
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.38 E-value=8.3e-13 Score=132.61 Aligned_cols=121 Identities=13% Similarity=0.137 Sum_probs=101.6
Q ss_pred CCCCCCCCceEeCCC-CCHHHHHHHHHhCCcceEEEEe-cCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCc
Q 016866 151 NGRPCPRPLVQAGPY-DSLKEVALKILQNKVATVPIIH-STGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 228 (381)
Q Consensus 151 ~g~~~~~~~i~v~~~-~sl~~a~~~m~~~~i~~lpVvd-~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~ 228 (381)
++.+|.++++++.++ +++.+|+++|.+++++++||+| + ++ +++|++|.+||++++...... ...
T Consensus 386 V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~---~g---~lvGiVt~~Dll~~l~~~~~~-------~~~- 451 (527)
T 3pc3_A 386 IAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQD---DG---SVLGVVGQETLITQIVSMNRQ-------QSD- 451 (527)
T ss_dssp GGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTT---TC---CEEEEEEHHHHHHHHHHHCCC-------TTS-
T ss_pred HHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECC---CC---EEEEEEEHHHHHHHHHhccCc-------CCC-
Confidence 455899999999999 9999999999999999999997 3 56 899999999999987643211 122
Q ss_pred cccccccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCC----CcEEEEEeHHHHHHHHhhh
Q 016866 229 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN----DSLLDIYSRSDITALAKDK 298 (381)
Q Consensus 229 i~~l~ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~----g~lvGiis~~Di~~l~~~~ 298 (381)
.+.++|.++++++.+++++.+++++|.++++ +||||++ |+++|+||..||++.+.+.
T Consensus 452 -----------~V~~im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 452 -----------PAIKALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp -----------BGGGGEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred -----------cHHHHhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 3455588999999999999999999977664 7999974 9999999999999977643
No 109
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.37 E-value=2.1e-13 Score=135.34 Aligned_cols=113 Identities=15% Similarity=0.274 Sum_probs=85.6
Q ss_pred cccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCCC
Q 016866 243 EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANP 322 (381)
Q Consensus 243 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~ 322 (381)
+.|..+++++.+++++.+++++|.+++++++||+|++++++|+||.+|+... . . .+.++.+
T Consensus 93 ~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~---~---~---~~~~v~d---------- 153 (496)
T 4fxs_A 93 AGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV---T---D---LTKSVAA---------- 153 (496)
T ss_dssp C--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC---C---C---TTSBGGG----------
T ss_pred cccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc---c---c---CCCcHHH----------
Confidence 4477789999999999999999999999999999999999999999998621 0 0 1345555
Q ss_pred CcccCC-C-cceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 016866 323 SLGFNG-Q-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 378 (381)
Q Consensus 323 ~~~~m~-~-~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l 378 (381)
+|. . +++++++++++.++++.|.+++++.+|||| ++|+++|+||..||++..
T Consensus 154 ---iM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 154 ---VMTPKERLATVKEGATGAEVQEKMHKARVEKILVVN-DEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp ---TSEEGGGCCEEECC----CGGGTCC---CCCEEEEC-TTSBCCEEECCC-----C
T ss_pred ---HhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCCEEEeehHhHHHHhh
Confidence 676 3 589999999999999999999999999999 579999999999999864
No 110
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.35 E-value=8.2e-14 Score=138.80 Aligned_cols=113 Identities=14% Similarity=0.167 Sum_probs=0.0
Q ss_pred cCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCC---CcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCC
Q 016866 245 NGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN---DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 321 (381)
Q Consensus 245 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~ 321 (381)
|.++++++.+++++.+++++|.+++++++||+|++ |+++|+||.+|+... . . . .+.++.+
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~-~---~---~~~~V~d--------- 165 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-L-T---Q---TETKVSD--------- 165 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-h-c---c---ccCcHHH---------
Confidence 66688999999999999999999999999999987 899999999999864 1 0 0 1245555
Q ss_pred CCcccCCCc--ceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 322 PSLGFNGQR--CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 322 ~~~~~m~~~--~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.++ ++++++++++.+|++.|.+++++.+|||| ++|+++|+||..||++.+.
T Consensus 166 ----iM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 166 ----MMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID-DDQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------------------------------------------
T ss_pred ----HhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEc-CCCeEEEEEEecHHHHhhh
Confidence 67666 99999999999999999999999999999 4799999999999998874
No 111
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.33 E-value=1.3e-13 Score=137.41 Aligned_cols=115 Identities=16% Similarity=0.290 Sum_probs=4.9
Q ss_pred ccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCC
Q 016866 242 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 321 (381)
Q Consensus 242 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~ 321 (381)
.++|.++++++.+++++.+|+++|.+++++.+||+|++++++|+||.+|+..... .+.++.+
T Consensus 98 ~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~~---------~~~~v~~--------- 159 (494)
T 1vrd_A 98 ENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEKN---------LSKKIKD--------- 159 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhcC---------CCCcHHH---------
Confidence 4457888999999999999999999999999999998899999999999986310 0245555
Q ss_pred CCcccCCC--cceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 322 PSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 322 ~~~~~m~~--~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
+|.+ ++.++.+++++.++++.|.+++++++|||| ++|+++|+||..|+++.+.
T Consensus 160 ----im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 160 ----LMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS-KDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp ------------------------------------------------------CHHHHT
T ss_pred ----HhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHhhhc
Confidence 6776 899999999999999999999999999999 4799999999999999874
No 112
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.31 E-value=1.9e-13 Score=135.51 Aligned_cols=113 Identities=14% Similarity=0.272 Sum_probs=0.9
Q ss_pred ccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCC
Q 016866 242 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 321 (381)
Q Consensus 242 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~ 321 (381)
.+.|..+++++.+++++.+++++|.+++++++||+| +++++|+||.+|+..... .+.++.+
T Consensus 91 ~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~~---------~~~~V~~--------- 151 (490)
T 4avf_A 91 ETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKPN---------AGDTVAA--------- 151 (490)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhccc---------cCCcHHH---------
Confidence 345777889999999999999999999999999999 899999999999963211 0245555
Q ss_pred CCcccCC-C-cceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 016866 322 PSLGFNG-Q-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 378 (381)
Q Consensus 322 ~~~~~m~-~-~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l 378 (381)
+|. . +++++++++++.++++.|.+++++.+|||| ++|+++|+||..||++..
T Consensus 152 ----vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 152 ----IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVD-ENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp -----------------------------------------------------------
T ss_pred ----HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEehHHhhhhc
Confidence 676 3 689999999999999999999999999999 579999999999999874
No 113
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.29 E-value=7.9e-11 Score=117.24 Aligned_cols=115 Identities=15% Similarity=0.178 Sum_probs=99.2
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
+|..+++++.+++++.+|++.|.+++++++||+|+ .+++ +++|++|.+|++... ....
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~~------------~~~~------ 152 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFIS------------DYNA------ 152 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHCS------------CSSS------
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhhc------------cCCC------
Confidence 68889999999999999999999999999999971 0146 899999999998620 0122
Q ss_pred ccccccccccccCC-CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 234 LGTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 234 ig~~~~~v~~~~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
.+.++|.+ +++++++++++.++++.|.+++++.+||+|++|+++|++|..|+++...
T Consensus 153 ------~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 153 ------PISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp ------BTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred ------cHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 34555887 8899999999999999999999999999999999999999999999765
No 114
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.29 E-value=2.8e-13 Score=135.02 Aligned_cols=165 Identities=15% Similarity=0.139 Sum_probs=22.4
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCccccccc
Q 016866 155 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 234 (381)
Q Consensus 155 ~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~i 234 (381)
|..+++++.+++++.+|+++|.+++++++||+|++...+ +++|++|.+|++.. . .....
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g---~lvGiVt~~Dl~~~--~---------~~~~~------- 161 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHG---VLLGLVTQRDYPID--L---------TQTET------- 161 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCC---eEEEEEEHHHHHhh--h---------ccccC-------
Confidence 778899999999999999999999999999997521126 89999999999763 0 00122
Q ss_pred cccccccccccCCC--ceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHH
Q 016866 235 GTWVPRIGEANGRP--FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 312 (381)
Q Consensus 235 g~~~~~v~~~~~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~ 312 (381)
.+.++|.++ ++++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++....... ..+
T Consensus 162 -----~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~---------~~d 227 (503)
T 1me8_A 162 -----KVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE---------LVD 227 (503)
T ss_dssp -----------------------------------------------------------------CCC---------CBC
T ss_pred -----cHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc---------hhc
Confidence 345558877 9999999999999999999999999999999999999999999986542211 000
Q ss_pred HHhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEE
Q 016866 313 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEG 367 (381)
Q Consensus 313 ~l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liG 367 (381)
.... ++ ....+.. ....+.++.|.+.+++.+.| |..++...|
T Consensus 228 -------~~~~--l~--v~a~v~~-~~~~e~~~~l~e~gv~~l~V-d~~~g~~~~ 269 (503)
T 1me8_A 228 -------SQKR--YL--VGAGINT-RDFRERVPALVEAGADVLCI-DSSDGFSEW 269 (503)
T ss_dssp -------TTSC--BC--CEEEECS-SSHHHHHHHHHHHTCSEEEE-CCSCCCSHH
T ss_pred -------cccc--cc--cccccCc-hhHHHHHHHHHhhhccceEE-ecccCcccc
Confidence 0000 11 1123444 66677788999999987544 322344434
No 115
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.26 E-value=4.4e-13 Score=130.47 Aligned_cols=109 Identities=19% Similarity=0.242 Sum_probs=0.0
Q ss_pred cCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcC---CCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCC
Q 016866 245 NGRPFAMLRPTASLGSALALLVQADVSSIPIVDD---NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 321 (381)
Q Consensus 245 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~ 321 (381)
+..+++++.|+.++.+|+++|.+++++.+||+|+ +++++|++|.+|+... . . +.++.+
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~---d----~---~~~V~e--------- 204 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ---D----A---ETPIKS--------- 204 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc---c----c---ceEhhh---------
Confidence 4457899999999999999999999999999986 6799999999998541 1 1 245555
Q ss_pred CCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHH
Q 016866 322 PSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRF 377 (381)
Q Consensus 322 ~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~ 377 (381)
+|+.++++++.+.++.+|.+.|.++++..+|||| ++++++|+||..|+.+.
T Consensus 205 ----vMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd-~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 205 ----VMTTEVVTGSSPITLEKANSLLRETKKGKLPIVD-SNGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------
T ss_pred ----hcccceEEecCCCCHHHHHHHHHHccccceeEEc-cCCcEEEEEEechhhhh
Confidence 8888999999999999999999999999999999 47999999999999875
No 116
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.25 E-value=5.2e-12 Score=129.31 Aligned_cols=136 Identities=12% Similarity=0.060 Sum_probs=100.0
Q ss_pred CCCCC--CCceEeCCCCCHHHHHHHHH-hCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCC------
Q 016866 152 GRPCP--RPLVQAGPYDSLKEVALKIL-QNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSL------ 222 (381)
Q Consensus 152 g~~~~--~~~i~v~~~~sl~~a~~~m~-~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~------ 222 (381)
+++|. ++++++++++++.|+.+.|. +++.+++||+|+ ++ +++|++|.+|+++.+...........
T Consensus 456 ~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~---~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 456 REIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA---NG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp HHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT---TC---BBCCEESHHHHTTTTTTC--------------
T ss_pred HHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec---CC---eEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 45788 89999999999999999999 799999999975 56 89999999999987754321111000
Q ss_pred -----ccccCcccccc-----------------ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCC
Q 016866 223 -----PILQQPVSSIQ-----------------LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND 280 (381)
Q Consensus 223 -----~~~~~~i~~l~-----------------ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g 280 (381)
..+.+.+..+. .-....++.++|+++++++++++++.+++++|.+++++++||+ ++|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERG 608 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETT
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECC
Confidence 00001111110 0011123778999999999999999999999999999999999 689
Q ss_pred cEEEEEeHHHHHHH
Q 016866 281 SLLDIYSRSDITAL 294 (381)
Q Consensus 281 ~lvGiis~~Di~~l 294 (381)
+++|+||++|+++.
T Consensus 609 ~lvGIVT~~Dll~~ 622 (632)
T 3org_A 609 KLVGIVEREDVAYG 622 (632)
T ss_dssp EEEEEEEGGGTEEC
T ss_pred EEEEEEehhhHHHH
Confidence 99999999999774
No 117
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.24 E-value=4e-12 Score=126.11 Aligned_cols=113 Identities=15% Similarity=0.170 Sum_probs=84.3
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
.|..+++++++++++.+|+++|.+++++++||+|+ ++ +++|++|.+|++. . .....+
T Consensus 94 ~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~---~~---~lvGiVt~rDL~~------~------~~~~~~----- 150 (496)
T 4fxs_A 94 GVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTE---NN---ELVGIITGRDVRF------V------TDLTKS----- 150 (496)
T ss_dssp --CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS---SS---BEEEEEEHHHHTT------C------CCTTSB-----
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEcc---CC---EEEEEEEHHHHhh------c------ccCCCc-----
Confidence 67889999999999999999999999999999975 46 8999999999962 0 111222
Q ss_pred ccccccccccccC-C-CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 234 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 234 ig~~~~~v~~~~~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
+.++|. . ++++++++.++.+++++|.++++..+||||++|+++|+||..|+++...
T Consensus 151 -------v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 151 -------VAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp -------GGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred -------HHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 345577 3 5899999999999999999999999999999999999999999998543
No 118
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.21 E-value=2.5e-12 Score=125.26 Aligned_cols=114 Identities=21% Similarity=0.243 Sum_probs=0.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
.|-.+++++.|+.++.||+++|.+++++.+||+++...++ +++||+|.+|+. |- ..+.+
T Consensus 143 g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~r-f~------------d~~~~----- 201 (556)
T 4af0_A 143 GFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQ-FQ------------DAETP----- 201 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCC---EEEEEEeccccc-cc------------ccceE-----
Confidence 3566789999999999999999999999999997644456 899999999973 21 11223
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHH
Q 016866 234 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 295 (381)
Q Consensus 234 ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~ 295 (381)
+.++|+++++++....++.+|.++|.++++..+||||++|+++|+||++|+.+..
T Consensus 202 -------V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 202 -------IKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp --------------------------------------------------------------
T ss_pred -------hhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 4455999999999999999999999999999999999999999999999998854
No 119
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.19 E-value=6e-12 Score=125.40 Aligned_cols=113 Identities=19% Similarity=0.277 Sum_probs=4.6
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
+|.++++++.+++++.+|++.|.+++++.+||+|+ ++ +++|++|..|+++.- ...
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~lvGivt~~Dl~~~~------------~~~------- 154 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE---EG---RLVGLLTNRDVRFEK------------NLS------- 154 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC---CC---EEEEEEEHHHHHhhc------------CCC-------
Confidence 57889999999999999999999999999999975 46 899999999997510 011
Q ss_pred ccccccccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 234 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 234 ig~~~~~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
..+.++|.+ +++++.+++++.+++++|.++++..+||||++|+++|++|..|+++...
T Consensus 155 -----~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 155 -----KKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp -----------------------------------------------------------CHHHHT
T ss_pred -----CcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 234556887 8999999999999999999999999999999999999999999998765
No 120
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.19 E-value=9.2e-12 Score=123.41 Aligned_cols=112 Identities=17% Similarity=0.206 Sum_probs=0.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
.|..+++++.+++++.+|+++|.+++++++||+| ++ +++|++|.+|+... .....
T Consensus 93 ~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g---~lvGIVt~rDl~~~------------~~~~~------ 147 (490)
T 4avf_A 93 AIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE----QG---ELVGIVTGRDLRVK------------PNAGD------ 147 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEhHHhhhc------------cccCC------
Confidence 5778899999999999999999999999999996 35 89999999999531 11122
Q ss_pred ccccccccccccC-C-CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHh
Q 016866 234 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 296 (381)
Q Consensus 234 ig~~~~~v~~~~~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~ 296 (381)
.+.++|. + +++++++++++.+++++|.+++++.+||||++|+++|+||..|+++...
T Consensus 148 ------~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 148 ------TVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -----------------------------------------------------------------
T ss_pred ------cHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 3445587 4 6899999999999999999999999999999999999999999998654
No 121
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.14 E-value=4.3e-13 Score=134.24 Aligned_cols=117 Identities=20% Similarity=0.233 Sum_probs=67.8
Q ss_pred cccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcC---CCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcC
Q 016866 241 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD---NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 317 (381)
Q Consensus 241 v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~ 317 (381)
+.++|.++++++.+++++.+|+++|.+++++.+||+|+ +++++|+||.+|+...... ..+.++.+
T Consensus 110 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~-------~~~~~v~~----- 177 (514)
T 1jcn_A 110 FEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK-------DHTTLLSE----- 177 (514)
T ss_dssp CCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-------------------------
T ss_pred hhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc-------cCCCCHHH-----
Confidence 34557778899999999999999999999999999997 5899999999998763210 01234444
Q ss_pred CCCCCCcccCCC--cceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 016866 318 QDANPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 378 (381)
Q Consensus 318 ~~~~~~~~~m~~--~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l 378 (381)
+|.+ ++.++.+++++.++++.|.+++++++|||| ++|+++|+||.+||++.+
T Consensus 178 --------vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 178 --------VMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVN-DCDELVAIIARTDLKKNR 231 (514)
T ss_dssp -----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEES-SSSCCC----CCCCSSCC
T ss_pred --------HhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEEC-CCCeEEEEEEHHHHHHHh
Confidence 6766 899999999999999999999999999999 479999999999998765
No 122
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.12 E-value=6.1e-12 Score=124.96 Aligned_cols=109 Identities=17% Similarity=0.325 Sum_probs=0.0
Q ss_pred ccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCCCC
Q 016866 244 ANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPS 323 (381)
Q Consensus 244 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~~ 323 (381)
.|..+++++.+++++.+++++|.+++++++||+|+ ++++|+++.+|+.. . . +.++.+
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~--~------~---~~~v~~----------- 154 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA--R------E---GKLVKE----------- 154 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc--C------C---CCCHHH-----------
Confidence 36668889999999999999999999999999997 99999999999875 1 0 245555
Q ss_pred cccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 016866 324 LGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 378 (381)
Q Consensus 324 ~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l 378 (381)
+|.++++++++++++.++++.|.+++++.+|||| ++|+++|+||..||++.+
T Consensus 155 --im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd-e~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 155 --LMTKEVITVPESIEVEEALKIMIENRIDRLPVVD-ERGKLVGLITMSDLVARK 206 (486)
T ss_dssp -------------------------------------------------------
T ss_pred --HccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEe-cCCeEEEEEEHHHHHHhh
Confidence 6766889999999999999999999999999999 479999999999999875
No 123
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.04 E-value=4.1e-10 Score=80.98 Aligned_cols=69 Identities=13% Similarity=0.241 Sum_probs=54.0
Q ss_pred ceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHHHhcCCCCCCCcccCC
Q 016866 249 FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNG 328 (381)
Q Consensus 249 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~m~ 328 (381)
++++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++.+..... ...+.++++ +|+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~---~~~~~~V~~-------------iMt 64 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGK---NPKEVKVEE-------------IMT 64 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTC---CGGGCBGGG-------------TCE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCC---CcccCCHHH-------------hcC
Confidence 57899999999999999999999999998 6899999999999864332211 111356666 787
Q ss_pred CcceEE
Q 016866 329 QRCQMC 334 (381)
Q Consensus 329 ~~~~~v 334 (381)
++++|+
T Consensus 65 ~~~iTV 70 (70)
T 3ghd_A 65 KNPVKI 70 (70)
T ss_dssp ECTTCC
T ss_pred CCCeEC
Confidence 777653
No 124
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.99 E-value=3.2e-11 Score=120.62 Aligned_cols=117 Identities=17% Similarity=0.204 Sum_probs=67.1
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
+|.++++++.+++++.+|+++|.+++++.+||+|++..++ +++|++|.+|+..... ....
T Consensus 113 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~---~lvGiVt~~Dl~~~~~----------~~~~------- 172 (514)
T 1jcn_A 113 GFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGS---KLVGIVTSRDIDFLAE----------KDHT------- 172 (514)
T ss_dssp TSCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC-------------------------
T ss_pred ccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCC---EEEEEEEHHHHHhhhh----------ccCC-------
Confidence 6778899999999999999999999999999996421136 8999999999965210 0011
Q ss_pred ccccccccccccCC--CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHH
Q 016866 234 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 295 (381)
Q Consensus 234 ig~~~~~v~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~ 295 (381)
..+.++|.+ +++++.+++++.+++++|.+++++.+||||++|+++|++|++|+++..
T Consensus 173 -----~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 173 -----TLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp -------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred -----CCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 234555887 899999999999999999999999999999999999999999998744
No 125
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.98 E-value=8.5e-11 Score=116.70 Aligned_cols=160 Identities=16% Similarity=0.259 Sum_probs=22.3
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHhhhcccCCCCCccccCcccccc
Q 016866 154 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 233 (381)
Q Consensus 154 ~~~~~~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~~~~~~~~~~~~~~~~~i~~l~ 233 (381)
.|..+++++.+++++.++++.|.+++++++||+++ + +++|+++.+|++. . ...
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~----~---~lvGivt~~Dl~~---~-----------~~~------ 150 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED----E---KVVGIITKKDIAA---R-----------EGK------ 150 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC----C---EEEEEEEHHHhcc---C-----------CCC------
Confidence 57788999999999999999999999999999964 5 7999999999864 0 112
Q ss_pred ccccccccccccCCCceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhhhhhcccccccccHHHH
Q 016866 234 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 313 (381)
Q Consensus 234 ig~~~~~v~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~~~~~~~~~~~~~v~~~ 313 (381)
.+.++|.++++++++++++.++++.|.+++++.+||+|++|+++|++|.+|+++...... ...+
T Consensus 151 ------~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~~~~---------~~~~- 214 (486)
T 2cu0_A 151 ------LVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYKN---------AVRD- 214 (486)
T ss_dssp --------------------------------------------------------------CCTT---------CCBC-
T ss_pred ------CHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhhccc---------cccc-
Confidence 234458878899999999999999999999999999999999999999999998654210 0000
Q ss_pred HhcCCCCCCCcccCCCcceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEE
Q 016866 314 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGII 369 (381)
Q Consensus 314 l~~~~~~~~~~~~m~~~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiI 369 (381)
.... ++- -..+...+ .+.+..|...+++.+ |++...|...+++
T Consensus 215 ------~~g~--~~v--~~~~~~~~--~~~a~~l~~~gvd~l-vvdta~G~~~~~L 257 (486)
T 2cu0_A 215 ------ENGE--LLV--AAAVSPFD--IKRAIELDKAGVDVI-VVDTAHAHNLKAI 257 (486)
T ss_dssp ------TTSC--BCC--EEEECTTC--HHHHHHHHHTTCSEE-EEECSCCCCHHHH
T ss_pred ------cCCc--eee--cceechhh--HHHHHHHHHhcCCce-EEEecCCcEeehh
Confidence 0001 110 01233333 566778999999876 6663345544443
No 126
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.84 E-value=6.9e-09 Score=74.49 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=42.7
Q ss_pred ceEeCCCCCHHHHHHHHHhCCcceEEEEecCCCCCCccceEEEeehhhHHHHHh
Q 016866 159 LVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 212 (381)
Q Consensus 159 ~i~v~~~~sl~~a~~~m~~~~i~~lpVvd~d~~~g~~~~~~gils~~dil~~l~ 212 (381)
++++.|++++.+|+++|.+++++++||+|+ | +++||+|.+|+++.+.
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~----~---~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG----D---EILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET----T---EEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC----C---EEEEEEEHHHHHHHHH
Confidence 689999999999999999999999999964 6 8999999999987554
No 127
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.74 E-value=1.9e-08 Score=71.82 Aligned_cols=49 Identities=14% Similarity=0.301 Sum_probs=44.6
Q ss_pred CceEecCCCCHHHHHHHHHhCCCcEEEEEcCCCcEEEEEeHHHHHHHHhh
Q 016866 248 PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 297 (381)
Q Consensus 248 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiis~~Di~~l~~~ 297 (381)
+++++.+++++.+|++.|.+++++++||+|+ |+++|++|.+|+++.+..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 3578999999999999999999999999996 999999999999986543
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.58 E-value=1.5e-07 Score=67.01 Aligned_cols=48 Identities=17% Similarity=0.372 Sum_probs=44.5
Q ss_pred cceEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 016866 330 RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 379 (381)
Q Consensus 330 ~~~~v~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~~l~ 379 (381)
++.++.+++++.+|++.|.+++++++||+| + |+++|+||.+|+++++.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d-~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME-G-DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 367899999999999999999999999999 4 89999999999999864
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=56.83 E-value=21 Score=25.25 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCcEEEEEeHHHHHHHHhhhh
Q 016866 270 VSSIPIVDDNDSLLDIYSRSDITALAKDKA 299 (381)
Q Consensus 270 ~~~lpVvd~~g~lvGiis~~Di~~l~~~~~ 299 (381)
...+=++|++|..+|+++..+.++++.+..
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~ 42 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRN 42 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTT
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcC
Confidence 456778999999999999999999876543
No 130
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=34.97 E-value=56 Score=22.97 Aligned_cols=25 Identities=16% Similarity=0.316 Sum_probs=20.6
Q ss_pred CCEEEEEeCCCCeEEEEEehHHHHHH
Q 016866 352 VRRLVIVEAGSKRVEGIISLSDVFRF 377 (381)
Q Consensus 352 ~~~l~Vvd~~~~~liGiIs~~DIl~~ 377 (381)
.+.+-++|+ +|..+|+++..+-++.
T Consensus 13 ~~eVrli~~-~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 13 AREVRLIDQ-NGDQLGIKSKQEALEI 37 (78)
T ss_dssp CSEEEEECT-TSCEEEEEEHHHHHHH
T ss_pred CCEEEEECC-CCcCCCcccHHHHHHH
Confidence 355778994 7999999999998865
No 131
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=34.21 E-value=18 Score=29.24 Aligned_cols=35 Identities=34% Similarity=0.672 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCEEEEEeCCCCeEEEEEehHHHHH
Q 016866 340 LHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFR 376 (381)
Q Consensus 340 l~~~~~~m~~~~~~~l~Vvd~~~~~liGiIs~~DIl~ 376 (381)
+.+.++.+.+.+..-++|-. +++++|+|.+.|.+|
T Consensus 121 ~~~~~~~la~~G~T~v~VA~--d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE--GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE--TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE--CCEEEEEEEEecCCC
Confidence 66777888999988888877 489999999988653
No 132
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=24.65 E-value=1.2e+02 Score=19.72 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=25.4
Q ss_pred cCCCCHHHHHHHHHhCCCCEEEEEeCCCCeE
Q 016866 335 LRSDPLHKVMERLANPGVRRLVIVEAGSKRV 365 (381)
Q Consensus 335 ~~~~tl~~~~~~m~~~~~~~l~Vvd~~~~~l 365 (381)
-+-+|+.+|+.+|...+...+.-.|.++|++
T Consensus 10 ~kpmsveEAv~qmel~gh~F~vF~n~~t~~~ 40 (57)
T 3k2t_A 10 LKPMDSEEAVLQMNLLGHSFYVYTDAETNGT 40 (57)
T ss_dssp -CCBCHHHHHHHHHHHTCSEEEEEBSSSCCE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEcCCCCCE
Confidence 3568899999999999999998898766654
No 133
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=21.30 E-value=82 Score=23.75 Aligned_cols=55 Identities=20% Similarity=0.231 Sum_probs=36.4
Q ss_pred ccEEEEcCCCCHHHHHHHHHHcCCCeee---cccCCCC-----cEEEEeehHHHHHHHHHhcc
Q 016866 63 GKVTALDVNLAVKQAFHVLYEQGLPMVP---LWDDFKG-----RFVGVLSALDFILILRELGT 117 (381)
Q Consensus 63 ~~vi~ld~~~~v~~A~~~l~~~~i~~~p---V~d~~~~-----~~vGilt~~D~~~il~~~~~ 117 (381)
-.++.++.+..-.+.-......++.+.| ++|.++. ++.|..+..++...+.....
T Consensus 66 ~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 66 TVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp SEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred cEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 4577777765445555666677888777 5665433 35688998888888775543
No 134
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=20.44 E-value=71 Score=24.26 Aligned_cols=17 Identities=29% Similarity=0.419 Sum_probs=13.9
Q ss_pred EEEEEcCCCcEEEEEeH
Q 016866 272 SIPIVDDNDSLLDIYSR 288 (381)
Q Consensus 272 ~lpVvd~~g~lvGiis~ 288 (381)
..||.+++|+++|+++.
T Consensus 105 ~~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 105 KSPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEEECTTCCEEEEEEE
T ss_pred EEeEECCCCCEEEEEEE
Confidence 36898878999999864
No 135
>2hje_A Autoinducer 2 sensor kinase/phosphatase LUXQ; PER/ARNT/simple-minded (PAS) fold, autoinducer-2 (AI-2), quorum sensing, histidine sensor kinase; 1.70A {Vibrio harveyi} SCOP: d.110.6.3 PDB: 2hj9_C 1zhh_B*
Probab=20.10 E-value=58 Score=27.75 Aligned_cols=19 Identities=32% Similarity=0.464 Sum_probs=16.0
Q ss_pred CCEEEEEeCCCCeEEEEEe
Q 016866 352 VRRLVIVEAGSKRVEGIIS 370 (381)
Q Consensus 352 ~~~l~Vvd~~~~~liGiIs 370 (381)
++|.||+|..+|+++|.+-
T Consensus 119 vRR~pIi~~~tGeVlG~Ly 137 (221)
T 2hje_A 119 VRRVPILDPSTGEVLGFSF 137 (221)
T ss_dssp EEEEEEEETTTTEEEEEEE
T ss_pred EEccceecCCCCcEEEEEE
Confidence 4689999988999999763
Done!