Query 016868
Match_columns 381
No_of_seqs 262 out of 1747
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 05:07:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016868.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016868hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ljs_A Fructokinase; fructokia 100.0 1.8E-55 6.1E-60 415.6 26.3 314 57-378 1-328 (338)
2 3pl2_A Sugar kinase, ribokinas 100.0 6.3E-54 2.2E-58 401.8 32.5 312 57-378 5-317 (319)
3 3iq0_A Putative ribokinase II; 100.0 5.5E-53 1.9E-57 397.2 32.1 310 59-378 2-312 (330)
4 4du5_A PFKB; structural genomi 100.0 1.4E-52 4.8E-57 395.3 30.2 309 57-375 23-334 (336)
5 3hj6_A Fructokinase, FRK; fruc 100.0 3.2E-54 1.1E-58 405.2 18.1 308 58-377 19-326 (327)
6 2qcv_A Putative 5-dehydro-2-de 100.0 1.5E-51 5.1E-56 387.9 35.3 313 59-378 10-325 (332)
7 3ktn_A Carbohydrate kinase, PF 100.0 8.2E-51 2.8E-55 385.0 34.9 310 59-378 1-331 (346)
8 2v78_A Fructokinase; transfera 100.0 3.8E-51 1.3E-55 381.9 30.3 305 61-379 2-311 (313)
9 1v1a_A 2-keto-3-deoxygluconate 100.0 1.8E-50 6.1E-55 376.7 32.8 300 61-378 2-303 (309)
10 1tyy_A Putative sugar kinase; 100.0 1.3E-51 4.5E-56 389.0 25.4 303 58-378 22-329 (339)
11 2dcn_A Hypothetical fructokina 100.0 2.7E-50 9.1E-55 375.9 29.6 304 61-380 2-310 (311)
12 3h49_A Ribokinase; transferase 100.0 4.3E-50 1.5E-54 376.7 30.6 306 59-379 4-315 (325)
13 3ry7_A Ribokinase; transferase 100.0 6.3E-50 2.2E-54 372.2 26.0 293 59-375 1-304 (304)
14 3ewm_A Uncharacterized sugar k 100.0 3.4E-49 1.2E-53 368.8 30.1 297 60-378 1-300 (313)
15 4e69_A 2-dehydro-3-deoxyglucon 100.0 4.3E-49 1.5E-53 370.2 30.8 300 40-364 12-317 (328)
16 4gm6_A PFKB family carbohydrat 100.0 5.9E-49 2E-53 372.9 30.1 310 58-378 22-344 (351)
17 1rkd_A Ribokinase; carbohydrat 100.0 6.8E-49 2.3E-53 366.0 29.2 297 58-378 2-307 (309)
18 3go6_A Ribokinase RBSK; phosph 100.0 1.1E-48 3.8E-53 364.4 30.2 284 55-379 14-305 (310)
19 3lhx_A Ketodeoxygluconokinase; 100.0 5.9E-49 2E-53 368.1 27.9 290 58-364 2-304 (319)
20 4e3a_A Sugar kinase protein; s 100.0 8E-49 2.7E-53 371.7 29.1 301 59-375 24-349 (352)
21 2rbc_A Sugar kinase, AGR_C_456 100.0 1.1E-48 3.8E-53 369.4 29.4 293 59-378 28-328 (343)
22 3kzh_A Probable sugar kinase; 100.0 8.4E-49 2.9E-53 368.4 26.2 299 58-379 4-310 (328)
23 3ikh_A Carbohydrate kinase; tr 100.0 1.5E-48 5E-53 362.0 24.7 281 59-379 1-289 (299)
24 2c4e_A Sugar kinase MJ0406; tr 100.0 3.7E-48 1.3E-52 359.9 25.3 289 61-378 6-299 (302)
25 2fv7_A Ribokinase; structural 100.0 9.1E-48 3.1E-52 361.8 26.4 295 57-374 21-328 (331)
26 2nwh_A AGR_C_3442P, carbohydra 100.0 2E-47 6.9E-52 357.3 26.3 297 60-378 3-307 (317)
27 1vm7_A Ribokinase; TM0960, str 100.0 1.4E-46 4.7E-51 350.6 30.3 291 59-379 13-311 (311)
28 3vas_A Putative adenosine kina 100.0 3.4E-47 1.2E-51 362.9 23.8 297 59-373 23-365 (370)
29 2afb_A 2-keto-3-deoxygluconate 100.0 3.6E-45 1.2E-49 346.9 36.2 309 59-378 11-343 (351)
30 2qhp_A Fructokinase; NP_810670 100.0 2.9E-46 1E-50 346.1 27.9 287 59-374 2-293 (296)
31 3b1n_A Ribokinase, putative; r 100.0 3.8E-46 1.3E-50 349.8 26.3 289 61-378 1-305 (326)
32 2pkf_A Adenosine kinase; trans 100.0 4.5E-46 1.5E-50 350.6 25.4 291 61-378 11-319 (334)
33 3ie7_A LIN2199 protein; phosph 100.0 8.6E-45 2.9E-49 340.0 32.0 290 60-379 2-304 (320)
34 3otx_A Adenosine kinase, putat 100.0 1.3E-45 4.6E-50 349.3 26.2 292 59-369 6-342 (347)
35 2jg1_A Tagatose-6-phosphate ki 100.0 1.2E-44 4E-49 340.4 28.7 289 61-379 21-325 (330)
36 3loo_A Anopheles gambiae adeno 100.0 2.9E-45 9.9E-50 349.1 22.2 288 60-364 23-355 (365)
37 3umo_A 6-phosphofructokinase i 100.0 3.9E-44 1.3E-48 333.9 28.9 290 62-379 3-307 (309)
38 2f02_A Tagatose-6-phosphate ki 100.0 8.7E-44 3E-48 333.5 29.0 289 60-379 2-308 (323)
39 2ajr_A Sugar kinase, PFKB fami 100.0 4E-44 1.4E-48 336.9 25.6 291 59-379 11-325 (331)
40 3uq6_A Adenosine kinase, putat 100.0 2.5E-44 8.4E-49 343.5 24.0 298 62-377 28-371 (372)
41 4e84_A D-beta-D-heptose 7-phos 100.0 1.8E-44 6E-49 341.6 22.8 287 58-373 51-351 (352)
42 1bx4_A Protein (adenosine kina 100.0 6.4E-44 2.2E-48 337.5 23.8 287 60-363 6-337 (345)
43 3bf5_A Ribokinase related prot 100.0 1.3E-44 4.4E-49 336.4 18.3 277 59-378 19-300 (306)
44 3cqd_A 6-phosphofructokinase i 100.0 2.3E-43 7.8E-48 328.7 26.7 288 62-379 3-307 (309)
45 3kd6_A Carbohydrate kinase, PF 100.0 1.1E-43 3.8E-48 331.3 22.9 292 59-378 1-297 (313)
46 2hlz_A Ketohexokinase; non-pro 100.0 9.9E-43 3.4E-47 324.8 29.0 277 59-363 16-309 (312)
47 2abs_A Adenosine kinase, AK; r 100.0 2.3E-43 7.8E-48 338.2 23.2 287 60-363 32-375 (383)
48 2abq_A Fructose 1-phosphate ki 100.0 2.1E-42 7.1E-47 321.8 28.0 285 62-379 2-298 (306)
49 2jg5_A Fructose 1-phosphate ki 100.0 5.3E-42 1.8E-46 319.0 29.5 286 61-379 1-298 (306)
50 1vk4_A PFKB carbohydrate kinas 100.0 1.8E-39 6.3E-44 300.7 14.5 278 61-373 12-293 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 7E-26 2.4E-30 210.8 13.8 218 109-359 12-269 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 1.3E-25 4.3E-30 206.2 14.8 226 106-361 19-268 (283)
53 1jxh_A Phosphomethylpyrimidine 99.9 8.7E-23 3E-27 187.6 15.4 160 187-360 95-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.9 1.4E-22 4.7E-27 183.3 13.9 161 186-360 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.9 4.9E-21 1.7E-25 174.4 19.0 163 186-360 74-250 (271)
56 3mbh_A Putative phosphomethylp 99.8 5.2E-20 1.8E-24 169.0 17.6 165 186-360 77-259 (291)
57 3h74_A Pyridoxal kinase; PSI-I 99.8 9.4E-20 3.2E-24 166.4 17.4 162 186-359 74-248 (282)
58 3pzs_A PM kinase, pyridoxamine 99.8 1.8E-19 6.3E-24 165.4 18.1 164 185-359 76-259 (289)
59 3zs7_A Pyridoxal kinase; trans 99.8 1.8E-18 6.1E-23 159.3 17.7 163 185-359 75-261 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.6 7.6E-15 2.6E-19 133.2 16.1 163 182-358 54-234 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.6 7.1E-15 2.4E-19 146.1 16.0 159 186-356 91-272 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.3 3.6E-11 1.2E-15 108.3 13.9 146 182-334 52-210 (265)
63 3bgk_A SMU.573, putative uncha 99.1 5.3E-10 1.8E-14 102.7 13.4 170 183-377 122-303 (311)
64 2r3b_A YJEF-related protein; p 99.1 8.6E-10 2.9E-14 101.3 14.2 169 183-377 108-286 (310)
65 3dzv_A 4-methyl-5-(beta-hydrox 99.1 8.6E-09 2.9E-13 92.5 19.5 164 174-352 47-229 (273)
66 3rpz_A ADP/ATP-dependent NAD(P 98.9 7.8E-08 2.7E-12 86.7 17.1 170 183-377 95-272 (279)
67 3rss_A Putative uncharacterize 98.8 6.3E-08 2.1E-12 94.5 15.5 172 182-377 316-494 (502)
68 3drw_A ADP-specific phosphofru 98.7 4.2E-07 1.4E-11 86.8 15.2 166 89-264 113-319 (474)
69 3nl6_A Thiamine biosynthetic b 98.5 5.6E-06 1.9E-10 81.4 18.9 162 174-352 294-495 (540)
70 1ua4_A Glucokinase, ADP-depend 98.5 1.5E-05 5E-10 76.4 19.7 161 91-263 109-301 (455)
71 3hpd_A Hydroxyethylthiazole ki 98.3 1.9E-05 6.3E-10 70.2 15.4 144 182-332 52-208 (265)
72 1gc5_A ADP-dependent glucokina 98.1 8.3E-05 2.8E-09 71.1 15.2 161 91-262 117-313 (467)
73 1l2l_A ADP-dependent glucokina 98.0 0.0001 3.4E-09 70.4 15.2 160 91-261 112-302 (457)
74 3k5w_A Carbohydrate kinase; 11 97.5 0.0011 3.8E-08 64.0 13.9 167 185-378 291-466 (475)
75 2fcj_A Small toprim domain pro 58.0 16 0.00054 27.7 4.9 80 186-280 26-105 (119)
76 3can_A Pyruvate-formate lyase- 56.5 74 0.0025 25.3 10.0 73 204-284 19-96 (182)
77 2yci_X 5-methyltetrahydrofolat 48.8 75 0.0026 27.7 8.6 91 184-292 45-137 (271)
78 1f6y_A 5-methyltetrahydrofolat 38.3 1.9E+02 0.0066 24.8 9.9 61 185-254 37-99 (262)
79 1ztd_A Hypothetical protein PF 35.8 34 0.0012 25.2 3.4 32 311-348 63-94 (133)
80 3o1n_A 3-dehydroquinate dehydr 35.4 2.2E+02 0.0076 24.7 9.5 93 187-293 134-234 (276)
81 2re2_A Uncharacterized protein 34.0 21 0.0007 27.6 2.2 38 93-136 65-102 (136)
82 3c8f_A Pyruvate formate-lyase 32.6 2E+02 0.0069 23.5 8.7 76 203-284 84-164 (245)
83 2gk4_A Conserved hypothetical 29.6 46 0.0016 28.3 3.9 49 61-116 4-52 (232)
84 2wfb_A Putative uncharacterize 29.0 26 0.0009 26.1 2.0 40 92-136 52-91 (120)
85 1ryi_A Glycine oxidase; flavop 25.8 43 0.0015 30.2 3.3 24 92-115 25-48 (382)
86 3kbq_A Protein TA0487; structu 25.2 72 0.0025 25.7 4.1 36 94-131 23-58 (172)
87 1rdu_A Conserved hypothetical 24.9 20 0.0007 26.6 0.7 39 93-136 48-86 (116)
88 4fk1_A Putative thioredoxin re 24.7 51 0.0018 28.7 3.5 20 95-114 17-36 (304)
89 3kkj_A Amine oxidase, flavin-c 24.4 65 0.0022 26.5 4.1 20 95-114 13-32 (336)
90 1eo1_A Hypothetical protein MT 23.7 27 0.00092 26.3 1.2 39 93-136 51-89 (124)
91 1y5e_A Molybdenum cofactor bio 23.5 1.2E+02 0.0041 24.1 5.2 36 95-132 32-67 (169)
92 3iwt_A 178AA long hypothetical 23.4 2E+02 0.007 22.7 6.7 34 95-130 41-74 (178)
93 4h3d_A 3-dehydroquinate dehydr 23.3 3.5E+02 0.012 23.1 8.7 94 187-294 114-215 (258)
94 2yx6_A Hypothetical protein PH 23.3 36 0.0012 25.4 1.9 38 93-136 50-87 (121)
95 1jzt_A Hypothetical 27.5 kDa p 22.7 92 0.0031 26.7 4.6 43 92-135 70-115 (246)
96 2yxh_A MAZG-related protein; T 21.7 2.4E+02 0.0082 20.8 6.2 53 317-378 54-111 (116)
97 3ucx_A Short chain dehydrogena 21.3 1.1E+02 0.0038 26.0 4.9 43 92-136 20-62 (264)
98 2wqp_A Polysialic acid capsule 21.2 2.7E+02 0.0093 25.2 7.5 47 202-259 89-136 (349)
99 3lyl_A 3-oxoacyl-(acyl-carrier 21.2 86 0.003 26.2 4.1 43 92-136 14-56 (247)
100 3r1i_A Short-chain type dehydr 20.9 96 0.0033 26.7 4.4 43 92-136 41-83 (276)
101 1y8q_A Ubiquitin-like 1 activa 20.7 4.5E+02 0.016 23.4 9.5 24 90-113 42-66 (346)
102 2o8n_A APOA-I binding protein; 20.6 1.1E+02 0.0036 26.6 4.5 43 92-135 91-135 (265)
103 1c0p_A D-amino acid oxidase; a 20.2 86 0.003 28.0 4.2 24 92-115 14-37 (363)
104 3dhn_A NAD-dependent epimerase 20.2 63 0.0022 26.5 3.0 24 92-115 13-36 (227)
No 1
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=1.8e-55 Score=415.59 Aligned_cols=314 Identities=37% Similarity=0.596 Sum_probs=270.1
Q ss_pred CCCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 57 ~~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
|+++++|+|+|++++|++...+..|.. +..+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+++||++
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~~~~~~-~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~gV~~ 79 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPLVKKGM-PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVT 79 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCCSSTTS-CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHTCBC
T ss_pred CCCCCCEEEEChhhhheeccCCCCccc-hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcCCCc
Confidence 345679999999999999887765543 6678889999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHC
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA 216 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~ 216 (381)
+++.+.++.+|+++++.++++|+|++.+++.++++..++++++..+.+++++++|++++.+..+.+.+.+.++++.+++.
T Consensus 80 ~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 159 (338)
T 3ljs_A 80 DGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAA 159 (338)
T ss_dssp TTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHT
T ss_pred eeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHhcCchHHHHHHHHHHHHHHc
Confidence 99998888899999999999999998888777788788988888777899999999998777788889999999999999
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEE
Q 016868 217 GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296 (381)
Q Consensus 217 g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 296 (381)
|+++++||+.+..+|.+.+...+.+.++++++|++++|++|++.|++....+.+++++.|++.|++.||||+|++|++++
T Consensus 160 g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~ 239 (338)
T 3ljs_A 160 GAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGRAQLLLVTDAAGPVHWY 239 (338)
T ss_dssp TCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCHHHHHHHHTTTTCCEEEEEETTEEEEEE
T ss_pred CCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhHHHHHHHHHhcCCCEEEEeeCCCceEEE
Confidence 99999999999988976666778888999999999999999999998766544457888989999999999999999999
Q ss_pred eCCceEEEccccccccCCCCccHHHHHHHHHHHHcC--------------CccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 297 TKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD--------------FSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 297 ~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g--------------~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
++++.+++|+++++++|||||||+|+|||+++|++| ++ +++|+++|+++|++++++.|+
T Consensus 240 ~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~-------l~~al~~A~~~aa~~v~~~Ga 312 (338)
T 3ljs_A 240 TRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPES-------IVSTLRFAAAVGALAVTRQGA 312 (338)
T ss_dssp ESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHH-------HHHHHHHHHHHHGGGC----C
T ss_pred ECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHH-------HHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999998 55 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhC
Q 016868 363 IPALPTREAVLNAIHA 378 (381)
Q Consensus 363 ~~~~~~~~~v~~~l~~ 378 (381)
.+++|+++||++++++
T Consensus 313 ~~~~p~~~ev~~~~~~ 328 (338)
T 3ljs_A 313 FTAMPMLSEVLSLIQE 328 (338)
T ss_dssp CCCTTHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHhh
Confidence 9899999999999875
No 2
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=6.3e-54 Score=401.84 Aligned_cols=312 Identities=27% Similarity=0.421 Sum_probs=281.2
Q ss_pred CCCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 57 ~~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
|+++++|+|+|++++|++...++.|..+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~ 84 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDN 84 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSSSCCGGGCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTEEC
T ss_pred cccCCCEEEEChhheeeecccCCCCccccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCcc
Confidence 45567999999999999998888877777788899999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCc-cccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSA-DMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 215 (381)
+++.+.++.+|+++++.++.+|++++.+++.+++ +..+++++++.+.+++++++|++++.+..+...+....+++.+++
T Consensus 85 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 164 (319)
T 3pl2_A 85 QYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREILTTRAN 164 (319)
T ss_dssp TTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT
T ss_pred ccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEecccccCchhHHHHHHHHHHHHH
Confidence 9999888889999999888889998888766655 667888888878889999999999876666666677777777665
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
+.++++||+.++.+|.+.+...+.+.++++++|++++|++|++.|++... .+++++.|++.|++.|+||+|++|+++
T Consensus 165 -~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~~~~l~~~g~~~vvvt~G~~G~~~ 241 (319)
T 3pl2_A 165 -RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETE--PERAGRALLERGVELAIVKQGPKGVMA 241 (319)
T ss_dssp -CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCS--HHHHHHHHHHTTCSEEEEEEETTEEEE
T ss_pred -CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCC--HHHHHHHHHhcCCCEEEEEECCCCeEE
Confidence 67789999999999988888888899999999999999999999998753 467788999999999999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+..++|+++||+++
T Consensus 242 ~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 314 (319)
T 3pl2_A 242 MTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFANTAGALVASRLECSTAMPTTDEVEAS 314 (319)
T ss_dssp ECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSCSGGGCCCHHHHHHH
T ss_pred EECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCcCCCCCHHHHHHH
Confidence 999889999999999999999999999999999999999 9999999999999999999998889999999999
Q ss_pred HhC
Q 016868 376 IHA 378 (381)
Q Consensus 376 l~~ 378 (381)
+++
T Consensus 315 l~~ 317 (319)
T 3pl2_A 315 LNQ 317 (319)
T ss_dssp CC-
T ss_pred Hhc
Confidence 875
No 3
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=5.5e-53 Score=397.22 Aligned_cols=310 Identities=28% Similarity=0.413 Sum_probs=270.6
Q ss_pred CCCcEEEEccceeecccCCCCCCccC-CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAE-SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~-~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|++|+|+|++++|++...++..... .......+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 2 ~m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~ 81 (330)
T 3iq0_A 2 SLSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIR 81 (330)
T ss_dssp --CEEEEESCCEEEEEEEEETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCT
T ss_pred CCCCEEEEcceeEEEeccCCCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCCCee
Confidence 45689999999999997533322211 11235678999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++.+.++.+|+++++.++++|++++.+++...+...++++++....+++++++|++++.+..+.+.+.+.++++.+++.+
T Consensus 82 ~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g 161 (330)
T 3iq0_A 82 GISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANG 161 (330)
T ss_dssp TEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTT
T ss_pred eEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhcCcchHHHHHHHHHHHHHcC
Confidence 99988888999999999999999776665566777788888887789999999999987666777788899999999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
+++++||+.+..+|... ..++.+.++++++|++++|++|++.|++.. +.+++++.|++.|++.||||+|++|+++++
T Consensus 162 ~~v~~D~~~~~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~ 238 (330)
T 3iq0_A 162 GVISFDPNIRKEMLDIP-EMRDALHFVLELTDIYMPSEGEVLLLSPHS--TPERAIAGFLEEGVKEVIVKRGNQGASYYS 238 (330)
T ss_dssp CEEEEECCCCGGGGGSH-HHHHHHHHHHHTCSEECCBGGGTTTTCSCS--SHHHHHHHHHHHTCSEEEEECGGGCEEEEC
T ss_pred CEEEEcCCCCccccCcH-HHHHHHHHHHhhCCEEecCHHHHHHHhCCC--CHHHHHHHHHHcCCCEEEEEeCCCceEEEE
Confidence 99999999888878654 467788889999999999999999999874 346788889899999999999999999999
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+++.+++|+++++++|||||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+..++|+++||+++++
T Consensus 239 ~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~~~ 311 (330)
T 3iq0_A 239 ANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVTRRGPMEGTSRLMEIETFIQ 311 (330)
T ss_dssp SSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSCSSSTTCCCHHHHHHHHH
T ss_pred CCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHHH
Confidence 8889999999999999999999999999999999999 999999999999999999999888999999999986
Q ss_pred C
Q 016868 378 A 378 (381)
Q Consensus 378 ~ 378 (381)
+
T Consensus 312 ~ 312 (330)
T 3iq0_A 312 R 312 (330)
T ss_dssp H
T ss_pred h
Confidence 5
No 4
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=1.4e-52 Score=395.31 Aligned_cols=309 Identities=29% Similarity=0.425 Sum_probs=263.9
Q ss_pred CCCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 57 ~~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
|.++++|+|+|++++|++...++. ......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~GV~~ 101 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRPGP-LEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDC 101 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTCEE
T ss_pred cCCCCCEEEEChhhhhccCCCCCc-cchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCc
Confidence 455579999999999999876543 2245667889999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCC-CceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRSDG-EREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~ 214 (381)
+++.+.++.+|+.+++.++.+| ++.+.+++..++...+++++++.+.+++++++|++++.. ..+...+.+.++++.++
T Consensus 102 ~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~ 181 (336)
T 4du5_A 102 SHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMR 181 (336)
T ss_dssp EEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSGGGSCTTHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCchhhCChHHHHHHHHHHHHHH
Confidence 9999988899999999998889 445656666777888899888878899999999988754 46666788889999999
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceE
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 294 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 294 (381)
+.++++++||+.++.+|...+...+.+.++++++|++++|++|++.|+|..+ .+++++.|.+.|++.|+||+|++|++
T Consensus 182 ~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~--~~~~~~~l~~~g~~~vvvt~G~~G~~ 259 (336)
T 4du5_A 182 AAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETT--PEGVARFYRQLGAKLVVVKLGAEGAY 259 (336)
T ss_dssp HTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCS--HHHHHHHHHHTTCSEEEEECGGGCEE
T ss_pred HCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCC--HHHHHHHHHhcCCCEEEEEecCCceE
Confidence 9999999999999999988777788888999999999999999999998753 46788899999999999999999999
Q ss_pred EEeCCceEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 295 YYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 295 ~~~~~~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
++++++.+++|+++++ ++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+.+++|+++||+
T Consensus 260 ~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~ 332 (336)
T 4du5_A 260 FDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-------VPEAVKRGAWIGARAVQVLGDSEGLPTRAELN 332 (336)
T ss_dssp EEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHC------CCCCHHHHH
T ss_pred EEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCccCCCCHHHHH
Confidence 9998889999999997 999999999999999999999999 99999999999999999999998899999998
Q ss_pred HH
Q 016868 374 NA 375 (381)
Q Consensus 374 ~~ 375 (381)
++
T Consensus 333 ~~ 334 (336)
T 4du5_A 333 AA 334 (336)
T ss_dssp CC
T ss_pred hc
Confidence 64
No 5
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=3.2e-54 Score=405.18 Aligned_cols=308 Identities=30% Similarity=0.550 Sum_probs=251.2
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
.++++|+|+|++++|++...+..|..+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 19 ~~~~~v~viG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~ 98 (327)
T 3hj6_A 19 KGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGEQIITD 98 (327)
T ss_dssp ---CCEEEESCCEEEEECCCCCSSGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHTTCBCT
T ss_pred cCCCCEEEEccceEEEeccCCCCCccccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcc
Confidence 45579999999999999988887777778889999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++.+.++.+|+++++..+ +|++++..++ +++..++++++..+.+++++++|++++.+..+.+.+.+.++++.++++|
T Consensus 99 ~v~~~~~~~t~~~~v~~~-~g~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g 175 (327)
T 3hj6_A 99 GIQQDKERRTTIVYVSKS-TRTPDWLPYR--EADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQG 175 (327)
T ss_dssp TCEEESSSCCCEEEECCC-TTCCCEEEEC--SGGGGCCSCCCHHHHHC--CEEEEESHHHHSHHHHHHHHHHHHHHHHTT
T ss_pred cEEEcCCCCceEEEEEec-CCCccEEEec--ChhhhCChhhcCHhHhccCCEEEECchHhcCchhHHHHHHHHHHHHHCC
Confidence 999888889999988765 6888887774 4666777777766778999999999986666667788899999999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
+++++||+.+..+|.+.+...+.+.++++++|++++|++|++.|++.... +++++.|.+.|++.|+||+|++|+++++
T Consensus 176 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~--~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 253 (327)
T 3hj6_A 176 KIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSP--ENYVKRYLELGVKAVILTLGEEGVIASD 253 (327)
T ss_dssp CEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCS--SGGGGGGTTTTCSEEEEECSTTCEEEEC
T ss_pred CEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHHHHHHhCCCCEEEEEECCCceEEEe
Confidence 99999999988888776666778888999999999999999999988443 4567778889999999999999999999
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+..++|+++||+++++
T Consensus 254 ~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 254 GEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT-------VKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIKEYN 326 (327)
T ss_dssp SSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCST-------THHHHHHHHCCCSSCC--------------------
T ss_pred CCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhc
Confidence 8889999999999999999999999999999999999 999999999999999999999888999999999875
No 6
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=1.5e-51 Score=387.85 Aligned_cols=313 Identities=25% Similarity=0.426 Sum_probs=271.4
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
++++|+|+|++++|++....+.+......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++++
T Consensus 10 ~~~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~ 89 (332)
T 2qcv_A 10 REFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSN 89 (332)
T ss_dssp CSEEEEEESCCEEEEEESSCSSCGGGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred cCCcEEEECcceEEEecCCCCCCccccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcc
Confidence 34689999999999998766655555567788999999999999999999999999999999999999999999999999
Q ss_pred eeecC-CCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 139 MRFDP-GARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 139 v~~~~-~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
+.+.+ +.+|+++++.++.+|++++.+++...++..++++++....+++++++|++++.+..+.+.+.+.++++.+++.+
T Consensus 90 v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g 169 (332)
T 2qcv_A 90 LVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRND 169 (332)
T ss_dssp EEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTT
T ss_pred eEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCccccCchhHHHHHHHHHHHHHCC
Confidence 98775 46899999887777888887776656677788888876778899999999876655556678889999999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCC-CChHHHHHHHHhcCCCEEEEEecCCceEEE
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED-PYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~-~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 296 (381)
+++++||+.+..+|...+...+.+.++++++|++++|++|++.|++... .+..++++.+++.|++.|+||+|++|++++
T Consensus 170 ~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 249 (332)
T 2qcv_A 170 VKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHGVEGSFAY 249 (332)
T ss_dssp CEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHTTSSCSEEEEECGGGCEEEE
T ss_pred CEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHHHcCCCEEEEEECCcceEEE
Confidence 9999999988888877666777788899999999999999999998752 233567788888999999999999999999
Q ss_pred eC-CceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 297 TK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 297 ~~-~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
++ ++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.+++|++++++++
T Consensus 250 ~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 322 (332)
T 2qcv_A 250 TKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIVVSKHSSSDAMPSVEEIEAL 322 (332)
T ss_dssp ETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHC-----CCCCHHHHHHH
T ss_pred ecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCccCCCCHHHHHHH
Confidence 87 567899999999999999999999999999999999 9999999999999999999998889999999998
Q ss_pred HhC
Q 016868 376 IHA 378 (381)
Q Consensus 376 l~~ 378 (381)
+++
T Consensus 323 l~~ 325 (332)
T 2qcv_A 323 IEK 325 (332)
T ss_dssp HHH
T ss_pred Hhc
Confidence 864
No 7
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=8.2e-51 Score=384.97 Aligned_cols=310 Identities=23% Similarity=0.278 Sum_probs=268.4
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
||++|+|+|++++|++....+ +..+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++++
T Consensus 1 m~~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~ 79 (346)
T 3ktn_A 1 MSLKIAAFGEVMLRFTPPEYL-MLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQW 79 (346)
T ss_dssp -CCEEEEECCCEEEEECSTTC-CTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred CCCcEEEeChhhhhhcCCCCC-cccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCCcceE
Confidence 457899999999999974322 2235667889999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEe--cCCCccccCChhccc-hhhcCCccEEEEccccc-cCchhHHHHHHHHHHHH
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFY--RNPSADMLLQEAELD-LSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~l~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~ 214 (381)
+... +.+|+++++..+.+++++++.+ +..++...+++++++ .+.+++++++|++++.+ ..+...+.+.++++.++
T Consensus 80 v~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~ 158 (346)
T 3ktn_A 80 VGEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAH 158 (346)
T ss_dssp EEEC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEeC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHH
Confidence 9875 5799999998876667665554 555667778888887 46789999999998754 35556688899999999
Q ss_pred HCCCeEEEeCCCCCCCCCCH--HHHHHHHHHHhhhCCEEecCHHHHhhccCCC-CC------ChHHHHHHHHh-cCCCEE
Q 016868 215 DAGVVLSYDPNLRLPLWPSA--DKAREGILSIWETADIIKISEEEISFLTQGE-DP------YDDAVVYKLFH-ANLKLL 284 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~--~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~-~~------~~~~~~~~l~~-~g~~~v 284 (381)
+.|+++++||+.+..+|... +...+.+.++++++|++++|++|++.|++.. .. +..++++.|.+ .|++.|
T Consensus 159 ~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~v 238 (346)
T 3ktn_A 159 AYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWF 238 (346)
T ss_dssp HTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEE
T ss_pred HcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEE
Confidence 99999999999998888753 5667888899999999999999999999987 32 23456677776 499999
Q ss_pred EEEecCCc-------eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHh
Q 016868 285 LVTEGPDG-------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357 (381)
Q Consensus 285 vvt~G~~G-------~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~ 357 (381)
|||+|++| ++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++
T Consensus 239 vvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A~a~aa~~v 311 (346)
T 3ktn_A 239 AGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS-------LEKAVTFATVNGVLAH 311 (346)
T ss_dssp EEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHT
T ss_pred EEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHh
Confidence 99999998 999988888999999999999999999999999999999999 9999999999999999
Q ss_pred hhcCCCCCCCCHHHHHHHHhC
Q 016868 358 MERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 358 ~~~G~~~~~~~~~~v~~~l~~ 378 (381)
++.|+.+ +|++++|++++++
T Consensus 312 ~~~G~~~-~p~~~ev~~~l~~ 331 (346)
T 3ktn_A 312 TIQGDIP-LTTVKQVNHVLEH 331 (346)
T ss_dssp TSSSSCC-CCCHHHHHHHHHC
T ss_pred ccCCCCC-CCCHHHHHHHHhc
Confidence 9999986 8999999999875
No 8
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=3.8e-51 Score=381.94 Aligned_cols=305 Identities=27% Similarity=0.380 Sum_probs=268.1
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
|+|+|+|++++|++...++ +......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++++.
T Consensus 2 ~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~ 80 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIK 80 (313)
T ss_dssp CCEEEECCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CeEEEECcceEEEecCCCC-cccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCCcCceEE
Confidence 5899999999999975433 222445677899999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCceEEEEE--ecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHHCC
Q 016868 141 FDPGARTALAFVT--LRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 141 ~~~~~~t~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g 217 (381)
+.++.+|+++++. ++++|++++.+++..++...++++++..+.+++++++|++++.+ +.+.+.+.+.++++.+++.
T Consensus 81 ~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~- 159 (313)
T 2v78_A 81 VDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR- 159 (313)
T ss_dssp EETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE-
T ss_pred EcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhcChHHHHHHHHHHHHHHHh-
Confidence 8888899999998 88889998887766667777888888777788999999988754 2455667777777776654
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCC--EEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETAD--IIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~d--vl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
++||+.+..+|.+.+..++.+.++++++| ++++|++|++.|++.. +.+++++.|.+.|++.|+||+|++|+++
T Consensus 160 ---~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 234 (313)
T 2v78_A 160 ---SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVT--DPDEAYRKYKELGVKVLLYKLGSKGAIA 234 (313)
T ss_dssp ---EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCC--CHHHHHHHHHHTTEEEEEEECGGGCEEE
T ss_pred ---CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCC--CHHHHHHHHHhCCCCEEEEEECCCCcEE
Confidence 89999888888766667778888999999 9999999999999864 3467788888999999999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+++|++++++++
T Consensus 235 ~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~ 307 (313)
T 2v78_A 235 YKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-------IEYSLAHGIAASTLVITVRGDNELTPTLEDAERF 307 (313)
T ss_dssp EETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSTTCCCHHHHHHH
T ss_pred eeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Confidence 988888899999999999999999999999999999999 9999999999999999999999888999999999
Q ss_pred HhCC
Q 016868 376 IHAP 379 (381)
Q Consensus 376 l~~~ 379 (381)
++++
T Consensus 308 ~~~~ 311 (313)
T 2v78_A 308 LNEF 311 (313)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8765
No 9
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=1.8e-50 Score=376.73 Aligned_cols=300 Identities=30% Similarity=0.429 Sum_probs=262.5
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
|+|+|+|++++|+++..++ +......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++++.
T Consensus 2 ~~i~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~ 80 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFR 80 (309)
T ss_dssp CSEEEESCCEEEEECSSSS-CGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTCBCTTEE
T ss_pred CcEEEEccceEEEecCCCC-cccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCCceEE
Confidence 5899999999999975433 222345677899999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHHCCCe
Q 016868 141 FDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 141 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g~~ 219 (381)
+.++ +|+++++.++.+|++++.+++...+...++++++..+.+++++++|++++.. +.+.+.+.+.++++.+++.+++
T Consensus 81 ~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~ 159 (309)
T 1v1a_A 81 RAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVR 159 (309)
T ss_dssp ECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTCE
T ss_pred EcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHcCCE
Confidence 8888 9999999988889998887766666777888888777789999999998765 3566778888999999999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeC-
Q 016868 220 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK- 298 (381)
Q Consensus 220 v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~- 298 (381)
+++||+.+..+|. .+...+.+.++++++|++++|++|++.|++.. +++++ +.|++.|+||+|++|+++ .+
T Consensus 160 v~~D~~~~~~~~~-~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----~~~~~---~~g~~~vvvt~G~~G~~~-~~~ 230 (309)
T 1v1a_A 160 VSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRV----EEALR---ALSAPEVVLKRGAKGAWA-FVD 230 (309)
T ss_dssp EEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH----HHHHH---HTCCSEEEEECGGGCEEE-EET
T ss_pred EEEeCCCCcccCC-HHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH----HHHHH---hcCCCEEEEEecCCCeeE-ecC
Confidence 9999998888884 55667788889999999999999999999864 34444 789999999999999998 65
Q ss_pred CceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHhC
Q 016868 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 299 ~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+++|+++++++++++
T Consensus 231 ~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~~~~ 303 (309)
T 1v1a_A 231 GRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRGDHEGAPYREDLEVLLKA 303 (309)
T ss_dssp TEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSTTTTTCCCHHHHTTCC--
T ss_pred CcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCcCCCCHHHHHHHHhh
Confidence 677899999999999999999999999999999999 9999999999999999999998888999999887654
No 10
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=1.3e-51 Score=389.04 Aligned_cols=303 Identities=33% Similarity=0.532 Sum_probs=259.6
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
++|++|+|+|++++|++... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 22 ~~m~~ilviG~~~~D~~~~~-------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~ 94 (339)
T 1tyy_A 22 KAMNKVWVIGDASVDLVPEK-------QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVT 94 (339)
T ss_dssp ---CCEEEESCCEEEEEECS-------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTEECT
T ss_pred cccCCEEEECcceeEEeccC-------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHHcCCCch
Confidence 33458999999999999863 23456789999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++.+.++.+|+++++.++++|+|++.+++..+++..++++ ..+.+++++++|++++.+..+.+.+.+.++++.+++.+
T Consensus 95 ~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g 172 (339)
T 1tyy_A 95 FLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAG 172 (339)
T ss_dssp TEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTT
T ss_pred heEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCCEEEEcchhhcCcccHHHHHHHHHHHHHcC
Confidence 9998888899999998888899988777655676666655 23567889999998876666777788889999999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
+++++||+.+..+|.+.+...+.+.++++++|++++|++|++.|++..+. +++++.|.+.|++.||||+|++|+++++
T Consensus 173 ~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~--~~~~~~l~~~g~~~VvvT~G~~G~~~~~ 250 (339)
T 1tyy_A 173 GYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHW--QDARYYLRDLGCDTTIISLGADGALLIT 250 (339)
T ss_dssp CEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSG--GGGSSTTGGGTCSCEEEECGGGCEEEES
T ss_pred CEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHHHHHHHcCCCEEEEEECCCceEEEe
Confidence 99999999888888766667778888999999999999999999987543 4566777788999999999999999998
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHcC-----CccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHH
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD-----FSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 372 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g-----~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v 372 (381)
+++.+++|+++++++||+||||+|+|+|+++|++| .+ +++|+++|+++|++++++.|+.+++|+++++
T Consensus 251 ~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~-------l~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev 323 (339)
T 1tyy_A 251 AEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHAL-------LAEAISNANACGAMAVTAKGAMTALPFPDQL 323 (339)
T ss_dssp SSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHH-------HHHHHHHHHHHHHHGGGSSSTTTTCCCHHHH
T ss_pred CCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhcccccccc-------HHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 88888999999999999999999999999999997 66 9999999999999999999998888999999
Q ss_pred HHHHhC
Q 016868 373 LNAIHA 378 (381)
Q Consensus 373 ~~~l~~ 378 (381)
++++++
T Consensus 324 ~~~l~~ 329 (339)
T 1tyy_A 324 NTFLSS 329 (339)
T ss_dssp HHHHC-
T ss_pred HHHHhc
Confidence 998865
No 11
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=2.7e-50 Score=375.91 Aligned_cols=304 Identities=28% Similarity=0.446 Sum_probs=266.1
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
++|+|+|++++|++...++. ..+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++++.
T Consensus 2 ~~v~viG~~~~D~~~~~~~~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~ 80 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPGP-LRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMK 80 (311)
T ss_dssp CEEEEESCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTCE
T ss_pred CCEEEECCceEEEecCCCCc-ccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCCcceEE
Confidence 58999999999999854332 22345677899999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCC--ceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHHCC
Q 016868 141 FDPGARTALAFVTLRSDGE--REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 141 ~~~~~~t~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g 217 (381)
+.++.+|+++++.++++|+ +++.+++..++...++++++..+.+++++++|++++.+ +.+.+.+.+.++++.+++.
T Consensus 81 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~- 159 (311)
T 2dcn_A 81 IDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR- 159 (311)
T ss_dssp EETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE-
T ss_pred EcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCcccccChHHHHHHHHHHHHHHHh-
Confidence 8888899999999988898 88887766667777888888777789999999988754 3556667778888877654
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
++||+.+..+|. .+...+.+.++++ ++|++++|++|++.|++.. +.+++++.|.+. ++.|+||+|++|+++
T Consensus 160 ---~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~~-~~~vvvt~G~~G~~~ 232 (311)
T 2dcn_A 160 ---SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGES--DPDKAAKAFSDY-AEIIVMKLGPKGAIV 232 (311)
T ss_dssp ---EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCC--CHHHHHHHHTTT-EEEEEEEEETTEEEE
T ss_pred ---CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCC--CHHHHHHHHHHh-CCEEEEEECCCCcEE
Confidence 899998888886 5556677888999 9999999999999999874 346778888888 899999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+++|++++++++
T Consensus 233 ~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~ 305 (311)
T 2dcn_A 233 YYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVMIRGDQENLPTTKDIETF 305 (311)
T ss_dssp EETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHH
T ss_pred EeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Confidence 998888899999999999999999999999999999999 9999999999999999999999888999999999
Q ss_pred HhCCC
Q 016868 376 IHAPV 380 (381)
Q Consensus 376 l~~~~ 380 (381)
++++.
T Consensus 306 ~~~~~ 310 (311)
T 2dcn_A 306 LREMK 310 (311)
T ss_dssp HHHC-
T ss_pred HHhcc
Confidence 88753
No 12
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=4.3e-50 Score=376.70 Aligned_cols=306 Identities=24% Similarity=0.342 Sum_probs=259.1
Q ss_pred CCCcEEEEccceeecccCCCCCCcc-----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA-----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~-----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
++++|+|||++++|++......... ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 4 ~~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~g 83 (325)
T 3h49_A 4 DNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKEN 83 (325)
T ss_dssp -CEEEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHHT
T ss_pred CCCeEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHHcC
Confidence 3578999999999996432211000 11356789999999999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
|+++++.+.++.+|+.++++++++|+|++.+++. .+...+++++++.+.+.+++++|++++........+.+.++++.+
T Consensus 84 V~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a 162 (325)
T 3h49_A 84 IDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRN-GSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA 162 (325)
T ss_dssp CBCSSCEEETTSCCCEEEEEECTTSCEEEECCTT-SHHHHCCGGGCCGGGGGGCSEEEEEEETTSTTSCHHHHHHHHHHH
T ss_pred CceeeEEecCCCCCceEEEEECCCCceeEEeccC-cccccCChhhcChhhhccCCEEEEecccCCcccCHHHHHHHHHHH
Confidence 9999999888889999999999999999887643 344557777877778899999999986543334557788999999
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCce
Q 016868 214 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGC 293 (381)
Q Consensus 214 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~ 293 (381)
++.+ .+++|++.++.+|... +.+.++++++|++++|++|++.|++... .+++++.|.+.|++.|+||+|++|+
T Consensus 163 ~~~~-~~~~d~~~~~~~~~~~----~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~~~~l~~~g~~~vvvt~G~~G~ 235 (325)
T 3h49_A 163 KARQ-MIICADMIKPRLNETL----DDICEALSYVDYLFPNFAEAKLLTGKET--LDEIADCFLACGVKTVVIKTGKDGC 235 (325)
T ss_dssp HHTT-CEEEEEECCCSSCCCH----HHHHHHHTTCSEEECBHHHHHHHHTCSS--HHHHHHHHHTTTCSEEEEECTTSCE
T ss_pred HhcC-CEEEecCCchhhhhHH----HHHHHHHhhCCEEecCHHHHHHHhCCCC--HHHHHHHHHHcCCCEEEEEeCCCCe
Confidence 9988 6778887777777543 3456788999999999999999998764 4677888889999999999999999
Q ss_pred EEEeCCceEEEccccc-cccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHH
Q 016868 294 RYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 372 (381)
Q Consensus 294 ~~~~~~~~~~~~~~~v-~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v 372 (381)
+++++++.+++|++++ +++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+++|+++||
T Consensus 236 ~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 308 (325)
T 3h49_A 236 FIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAAISVLSVGATTGVKNRKLV 308 (325)
T ss_dssp EEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSSSCSSSHHH
T ss_pred EEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCCCCCCCCHHHH
Confidence 9999988889999886 8999999999999999999999999 9999999999999999999999889999999
Q ss_pred HHHHhCC
Q 016868 373 LNAIHAP 379 (381)
Q Consensus 373 ~~~l~~~ 379 (381)
+++++++
T Consensus 309 ~~~l~~~ 315 (325)
T 3h49_A 309 EQLLEEY 315 (325)
T ss_dssp HTC----
T ss_pred HHHHHhc
Confidence 9988764
No 13
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=6.3e-50 Score=372.18 Aligned_cols=293 Identities=27% Similarity=0.346 Sum_probs=257.3
Q ss_pred CCCcEEEEccceeecccCCCCCCcc-----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA-----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~-----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
||++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 1 Mm~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~g 80 (304)
T 3ry7_A 1 MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAH 80 (304)
T ss_dssp -CCEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTT
T ss_pred CCCcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcC
Confidence 4578999999999999887776643 23457889999999999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCccEEEEccccccCchhHHHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAAK 211 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 211 (381)
|+++++.+.++.+|+.+++.++++|++++..+ .+++..+++++++. +.+++++++++++ +.+.+.+.++++
T Consensus 81 v~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~ 153 (304)
T 3ry7_A 81 IDTSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADFVVAQL-----EVPIPAIISAFE 153 (304)
T ss_dssp CBCTTCEEESSSCCEEEEEEECSSCCEEEEEE--CGGGGGCCHHHHHTTHHHHHTCSEEEEET-----TSCHHHHHHHHH
T ss_pred CcchhEEEcCCCCCcEEEEEECCCCCEEEEEe--cCchhcCCHHHHHHHHHHhccCCEEEEcC-----CCCHHHHHHHHH
Confidence 99999998888899999999999999998876 45666788877653 4688999998864 345678889999
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEe
Q 016868 212 AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTE 288 (381)
Q Consensus 212 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~ 288 (381)
.+++.++++++||+.... .+.++++++|++++|++|++.|++....+. .++++.|++.|++.|+||+
T Consensus 154 ~a~~~~~~v~~D~~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 223 (304)
T 3ry7_A 154 IAKAHGVTTVLNPAPAKA----------LPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITL 223 (304)
T ss_dssp HHHHTTCEEEEECCSCCC----------CCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHcCCEEEEeCCcccc----------ccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEe
Confidence 999999999999975322 234678899999999999999999875433 4566788889999999999
Q ss_pred cCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcC-CccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 016868 289 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD-FSLLQKEDQLRDALRFANACGALTVMERGAIPALP 367 (381)
Q Consensus 289 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g-~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~ 367 (381)
|++|++++++++.+++|+++++++||+||||+|+|+|+++|++| ++ +++|+++|+++|++++++.|+.+++|
T Consensus 224 G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~-------~~~a~~~A~~~aa~~~~~~G~~~~~p 296 (304)
T 3ry7_A 224 GKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDN-------LADAIDFGNKASSLTVQKHGAQASIP 296 (304)
T ss_dssp GGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTT-------HHHHHHHHHHHHHTTSCCCCTGGGCC
T ss_pred CCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHHHhCCCCccccCC
Confidence 99999999988999999999999999999999999999999999 99 99999999999999999999998899
Q ss_pred CHHHHHHH
Q 016868 368 TREAVLNA 375 (381)
Q Consensus 368 ~~~~v~~~ 375 (381)
+++||+++
T Consensus 297 ~~~ev~~~ 304 (304)
T 3ry7_A 297 LLEEVNQV 304 (304)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999763
No 14
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=3.4e-49 Score=368.76 Aligned_cols=297 Identities=34% Similarity=0.561 Sum_probs=260.6
Q ss_pred CCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGM 139 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v 139 (381)
||+|+|+|++++|++...++.. .+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++++
T Consensus 1 M~~v~viG~~~iD~~~~~~g~~-~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v 79 (313)
T 3ewm_A 1 MSLIASIGELLIDLISVEEGDL-KDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGI 79 (313)
T ss_dssp -CEEEEESCCEEEEEESSSSCT-TTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred CCcEEEECceeeeeecCCCCCc-ccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCCCccce
Confidence 4689999999999998755432 245667889999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCe
Q 016868 140 RFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 140 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~ 219 (381)
.+.++.+|+++++.++. |++++..+ ...+...+++++++.+.+++++++|++++.+..+.+.+.+.++++.++ .+++
T Consensus 80 ~~~~~~~T~~~~~~~~~-g~~~~~~~-~~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~ 156 (313)
T 3ewm_A 80 VKDEKKHTGIVFVQLKG-ASPSFLLY-DDVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSL 156 (313)
T ss_dssp EEESSSCCEEEEEECSS-SSCEEEEC-CSSGGGCCCGGGCCHHHHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-TTBE
T ss_pred eecCCCCceEEEEEecC-CCcceEee-ccCHHHhCChhhCCHHHhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-cCCE
Confidence 98888899999998865 99998887 344556788888887788899999999987766777888899999888 4799
Q ss_pred EEEeCCCCCCCCC-CHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeC
Q 016868 220 LSYDPNLRLPLWP-SADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298 (381)
Q Consensus 220 v~~D~~~~~~~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 298 (381)
+++||+.+..+|. ..+...+.+.++++++|++++|++|++.|++.... ..+.+.||||+|++|++++++
T Consensus 157 v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~----------~~~~~~vviT~G~~G~~~~~~ 226 (313)
T 3ewm_A 157 IAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE----------VKGSMLTAITLGPKGCRLIKN 226 (313)
T ss_dssp EEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC----------CCCSSEEEEECGGGEEEEEET
T ss_pred EEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc----------ccCceEEEEEECCCCeEEEEC
Confidence 9999998888887 45667788889999999999999999999875432 134667899999999999999
Q ss_pred CceEEEccccccccCCCCccHHHHHHHHHHHH--cCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHH
Q 016868 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLS--TDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 376 (381)
Q Consensus 299 ~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~--~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l 376 (381)
++.+++|+++++++||+||||+|+|+|+++|+ +|++ +++|+++|+++|++++++.|+.. +|+++||++++
T Consensus 227 ~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~-~p~~~ev~~~l 298 (313)
T 3ewm_A 227 ETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLD-------LLKLGKFANLVAALSTQKRGAWS-TPRKDELLKYK 298 (313)
T ss_dssp TEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCC-------HHHHHHHHHHHHHHHTTSCSSCC-CCCHHHHTTSH
T ss_pred CeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHHHHccCCCCC-CCCHHHHHHHH
Confidence 98899999999999999999999999999999 9999 99999999999999999999964 89999999887
Q ss_pred hC
Q 016868 377 HA 378 (381)
Q Consensus 377 ~~ 378 (381)
++
T Consensus 299 ~~ 300 (313)
T 3ewm_A 299 EA 300 (313)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 15
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=4.3e-49 Score=370.16 Aligned_cols=300 Identities=25% Similarity=0.407 Sum_probs=263.8
Q ss_pred cccccccCCCCCCCCccCCCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHc--CCceEEEeecC
Q 016868 40 NVRVKALPGDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARL--GGSSAFIGKVG 117 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~L--G~~v~li~~vG 117 (381)
.+-||+|+ +++. ++|+|+|++++|++... + ...+...+||++.|+|++|++| |.++.++|.+|
T Consensus 12 ~~~~~~y~---~~~m------~~i~viG~~~iD~~~~~-~-----~~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG 76 (328)
T 4e69_A 12 DLGTENLY---FQSM------MHILSIGECMAELAPAD-L-----PGTYRLGFAGDTFNTAWYLARLRPESRISYFSAIG 76 (328)
T ss_dssp CCCCBCSS---CBSS------CEEEEESCCEEEEEECS-S-----TTEEEEEEECHHHHHHHHHHHHCTTSEEEEECEEC
T ss_pred ccCccccc---cccC------CcEEEecCcEEEEecCC-C-----CCceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeC
Confidence 46689999 4433 68999999999999862 1 1456789999999999999999 89999999999
Q ss_pred CChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccc-cCChhccchhhcCCccEEEEcccc
Q 016868 118 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM-LLQEAELDLSLITKAKIFHYGSIS 196 (381)
Q Consensus 118 ~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~l~~~~i~~~~~~~~~~~~ 196 (381)
+|.+|+++++.|++.||+++++.+.++.+|+.+++.++ +|+|++.+++...... .++..++..+.+++++++|++++.
T Consensus 77 ~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ 155 (328)
T 4e69_A 77 DDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFSGIT 155 (328)
T ss_dssp SSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHTTCSEEEEEHHH
T ss_pred CCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhcCCCEEEECCch
Confidence 99999999999999999999999988889999999998 9999998876654432 334444445778999999999864
Q ss_pred c--cCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHH
Q 016868 197 L--ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY 274 (381)
Q Consensus 197 ~--~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 274 (381)
+ ..+.+.+.+.++++.+++.++++++||+.++.+|.+.+...+.+.++++++|++++|++|++.|++.. +.+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~--~~~~~~~ 233 (328)
T 4e69_A 156 LAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDA--GPDATAD 233 (328)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTCS--SHHHHHH
T ss_pred hhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCCC--CHHHHHH
Confidence 3 35667788889999999999999999998888898777788889999999999999999999999875 4477888
Q ss_pred HHHhcCCCEEEEEecCCceEEEeCCceEEEcccc-ccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 016868 275 KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 353 (381)
Q Consensus 275 ~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~A 353 (381)
.|.+.|++.||||+|++|++++++++.+++|+++ ++++||+||||+|+|+|+++|++|++ +++|+++|+++|
T Consensus 234 ~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~a 306 (328)
T 4e69_A 234 RYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP-------LETAIAAAAALA 306 (328)
T ss_dssp HHHTTTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHH
Confidence 9999999999999999999999999889999986 79999999999999999999999999 999999999999
Q ss_pred HHHhhhcCCCC
Q 016868 354 ALTVMERGAIP 364 (381)
Q Consensus 354 a~~~~~~G~~~ 364 (381)
++++++.|+.+
T Consensus 307 a~~v~~~Ga~~ 317 (328)
T 4e69_A 307 GQVVQGKGALV 317 (328)
T ss_dssp HHHHTSSSSSC
T ss_pred HHHHccCCCcC
Confidence 99999999875
No 16
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=5.9e-49 Score=372.93 Aligned_cols=310 Identities=19% Similarity=0.271 Sum_probs=254.8
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+||.+|++||++++|+.+. .+.|..+...+...+||++.|+|++|+|||.++.++|.||+|.+|+++++.|+++||+++
T Consensus 22 ~mm~kv~~~GE~m~~l~p~-~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~ 100 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQ-QGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQVDTA 100 (351)
T ss_dssp ---CEEEEECCCEEEEECC-TTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTEECT
T ss_pred hccCCEEEEcceeEEecCC-CCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcc
Confidence 4667999999999999876 345666677888999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc-hhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD-LSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~ 215 (381)
++...++..|..++...+..+++.+.+++...+...+...++. .+.+++++++|++++.+ ..+...+.+.++++.+++
T Consensus 101 ~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~ 180 (351)
T 4gm6_A 101 FVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKR 180 (351)
T ss_dssp TEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccchhhchhHHHHHHHHHHHHHH
Confidence 9998888666666666667777888887666655455555544 35789999999998755 466678889999999999
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhc--------CCCEEEEE
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA--------NLKLLLVT 287 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~--------g~~~vvvt 287 (381)
+|++|+|||++|+.+|. .+..++.+.++++++|++++|++|++.+++......+ ..+.+.+. +.+.++++
T Consensus 181 ~g~~v~~D~n~r~~lw~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~ 258 (351)
T 4gm6_A 181 NGIKISFDMNYRAKLWE-LEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTD-YYQAMHDKYPNIELFYATKRTVIS 258 (351)
T ss_dssp TTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSC-HHHHHHHHCTTCCEEEEEEEEEEE
T ss_pred cCCCcccCCCcCchhhh-hhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhH-HHHHHHhhhhhhhhhhccccceee
Confidence 99999999999999995 5677888999999999999999999999987654332 22232221 22334555
Q ss_pred ec--CCceEEEeCCceEEEccccc-cccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 288 EG--PDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 288 ~G--~~G~~~~~~~~~~~~~~~~v-~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
.+ ..|+.++..++.++.++.++ +++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~A~aaaal~v~~~Ga~~ 331 (351)
T 4gm6_A 259 ASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR-------PDETVKFATAAAGLKHSIHGDIN 331 (351)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSC
T ss_pred eccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCCCCCCC
Confidence 44 34667788888888888775 7999999999999999999999999 99999999999999999999998
Q ss_pred CCCCHHHHHHHHhC
Q 016868 365 ALPTREAVLNAIHA 378 (381)
Q Consensus 365 ~~~~~~~v~~~l~~ 378 (381)
++| .+||++++.+
T Consensus 332 ~~~-~~ev~~~l~~ 344 (351)
T 4gm6_A 332 PFD-EKTIADFAAD 344 (351)
T ss_dssp CCC-HHHHHHHHHC
T ss_pred CCC-HHHHHHHHhC
Confidence 765 6789998864
No 17
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=6.8e-49 Score=366.05 Aligned_cols=297 Identities=25% Similarity=0.336 Sum_probs=256.2
Q ss_pred CCCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
+++++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~g 81 (309)
T 1rkd_A 2 QNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDN 81 (309)
T ss_dssp --CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTT
T ss_pred CCCCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcC
Confidence 34568999999999999887766543 23457788999999999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCccEEEEccccccCchhHHHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAAK 211 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 211 (381)
|+++++.+.++.+|+.++++++++|++++.++ .+++..+++++++. +.+++++++++++. .+.+.+..+++
T Consensus 82 v~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~ 154 (309)
T 1rkd_A 82 IDITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASALLMQLE-----SPLESVMAAAK 154 (309)
T ss_dssp EECTTEEEETTCCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHTTHHHHHHCSEEEECSS-----SCHHHHHHHHH
T ss_pred CCccceEecCCCCCceEEEEECCCCCeEEEEe--CCchhcCCHHHHHHHHHhcccCCEEEEeCC-----CCHHHHHHHHH
Confidence 99999988888899999999998899998776 45566677777653 45778999998642 34567788899
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCC---hHHHHHHHHhcCCCEEEEEe
Q 016868 212 AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---DDAVVYKLFHANLKLLLVTE 288 (381)
Q Consensus 212 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvt~ 288 (381)
.+++.++++++||+.... | ..++++++|++++|++|++.|++....+ ..++++.|.+.|++.|+||+
T Consensus 155 ~a~~~g~~v~~D~~~~~~-~---------~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 224 (309)
T 1rkd_A 155 IAHQNKTIVALNPAPARE-L---------PDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITL 224 (309)
T ss_dssp HHHHTTCEEEECCCSCCC-C---------CHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHcCCEEEEECCcccc-c---------hHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEEE
Confidence 999999999999986532 2 1256789999999999999999876433 24556788889999999999
Q ss_pred cCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 016868 289 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368 (381)
Q Consensus 289 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~ 368 (381)
|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+...+|+
T Consensus 225 G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~ 297 (309)
T 1rkd_A 225 GSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTRKGAQPSVPW 297 (309)
T ss_dssp GGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSGGGCCC
T ss_pred CCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHcCCCCccCCCCC
Confidence 9999999988888899999999999999999999999999999999 999999999999999999999878899
Q ss_pred HHHHHHHHhC
Q 016868 369 REAVLNAIHA 378 (381)
Q Consensus 369 ~~~v~~~l~~ 378 (381)
++++++++++
T Consensus 298 ~~ev~~~~~~ 307 (309)
T 1rkd_A 298 REEIDAFLDR 307 (309)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998864
No 18
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=1.1e-48 Score=364.43 Aligned_cols=284 Identities=25% Similarity=0.284 Sum_probs=246.7
Q ss_pred ccCCCCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHH
Q 016868 55 KETRESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILK 130 (381)
Q Consensus 55 ~~~~~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~ 130 (381)
+.++||++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+
T Consensus 14 ~~~~mm~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~ 93 (310)
T 3go6_A 14 NVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLR 93 (310)
T ss_dssp -----CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHH
T ss_pred ccccccCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHH
Confidence 33457789999999999999887776543 23467889999999999999999999999999999999999999999
Q ss_pred HCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHH
Q 016868 131 ENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAA 210 (381)
Q Consensus 131 ~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 210 (381)
+.||+++++... +.+|+.++++++++|+++++.++ +++..++ ++ .+.+++++++++++ +.+.+.+.+++
T Consensus 94 ~~gV~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~--~~-~~~l~~~~~v~~~~-----~~~~~~~~~~~ 162 (310)
T 3go6_A 94 ANAVGLDRTVTV-PGPSGTAIIVVDASAENTVLVAP--GANAHLT--PV-PSAVANCDVLLTQL-----EIPVATALAAA 162 (310)
T ss_dssp HTTCBCTTCEEC-SSCCEEEEEEECTTSCEEEEEEC--GGGGGCC--CC-TTTTTTCSEEEECS-----SSCHHHHHHHH
T ss_pred HcCCccceeEec-CCCCCEEEEEEcCCCCEEEEecC--ChhhhHH--HH-HHHhhcCCEEEECC-----CCCHHHHHHHH
Confidence 999999999755 45999999999999999988873 4554555 44 46788999999875 33567888999
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecC
Q 016868 211 KAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGP 290 (381)
Q Consensus 211 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 290 (381)
+.+++.++++++||+++.. .++.+.++++++|++++|++|++.|++. ++.|+||+|+
T Consensus 163 ~~a~~~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~----------------~~~vvvt~G~ 219 (310)
T 3go6_A 163 RAAQSADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP----------------PTHFVITLGV 219 (310)
T ss_dssp HHHHHTTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC----------------CSEEEEECGG
T ss_pred HHHHHcCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC----------------CCEEEEEECC
Confidence 9999999999999985432 2456778899999999999999999874 6889999999
Q ss_pred CceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc----CCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 016868 291 DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST----DFSLLQKEDQLRDALRFANACGALTVMERGAIPAL 366 (381)
Q Consensus 291 ~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~----g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~ 366 (381)
+|++++++++.+++|+++++++||+||||+|+|||+++|++ |++ +++|+++|+++|++++++.|+.+++
T Consensus 220 ~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~~~ 292 (310)
T 3go6_A 220 RGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE-------RLRALRRACAAGALATLVSGVGDCA 292 (310)
T ss_dssp GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH-------HHHHHHHHHHHHHHHTTSSCSTTCC
T ss_pred CCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC-------HHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999989999999999999999999999999999999 887 9999999999999999999999889
Q ss_pred CCHHHHHHHHhCC
Q 016868 367 PTREAVLNAIHAP 379 (381)
Q Consensus 367 ~~~~~v~~~l~~~ 379 (381)
|+++||++++++.
T Consensus 293 p~~~ev~~~l~~~ 305 (310)
T 3go6_A 293 PAAAAIDAALRAN 305 (310)
T ss_dssp CCHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhc
Confidence 9999999999875
No 19
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=5.9e-49 Score=368.10 Aligned_cols=290 Identities=23% Similarity=0.327 Sum_probs=249.5
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcC----CceEEEeecCCChHHHHHHHHHHHCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLG----GSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG----~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
+|+++|+|+|++++|++... ..+...+||++.|+|++|++|| .++.++|.+|+|.+|+++++.|++.|
T Consensus 2 ~m~~~i~viG~~~~D~~~~~--------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~G 73 (319)
T 3lhx_A 2 SLSKKIAVIGECMIELSEKG--------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGEN 73 (319)
T ss_dssp --CEEEEEESCCEEEEEC-----------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTTT
T ss_pred CccCceeeechhhhhhccCC--------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcC
Confidence 45568999999999998753 2457889999999999999999 89999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCC-ccccCChhccc--hhhcCCccEEEEccccc--cCchhHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPS-ADMLLQEAELD--LSLITKAKIFHYGSISL--ITEPCKSAHIA 208 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~--~~~i~~~~~~~~~~~~~--~~~~~~~~~~~ 208 (381)
|+++++.+.++.+|+++++.++++|+|++.+++... ++..+++++++ .+.+++++++|++++.+ ..+.+.+.+.+
T Consensus 74 V~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~ 153 (319)
T 3lhx_A 74 VDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKLLS 153 (319)
T ss_dssp EECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHH
T ss_pred CCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhcCchhHHHHHH
Confidence 999999998888999999999989999998876543 33445554443 25688999999998654 35666788899
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEe
Q 016868 209 AAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTE 288 (381)
Q Consensus 209 ~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~ 288 (381)
+++.+++.++++++||+.++.+|.+.+...+.+.++++++|++++|++|++.|++.. +.+++++.|.+.|++.||||+
T Consensus 154 ~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvt~ 231 (319)
T 3lhx_A 154 LLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQ--PVEDVIARTHNAGVKEVVVKR 231 (319)
T ss_dssp HHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCC--CHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCC--CHHHHHHHHHhcCCCEEEEEE
Confidence 999999999999999998888898887888889999999999999999999999874 347788899999999999999
Q ss_pred cCCceEEEeCCceE-EEccc---cccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 289 GPDGCRYYTKDFSG-RVQGL---KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 289 G~~G~~~~~~~~~~-~~~~~---~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
|++|++++++++.+ ++|++ +++++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+..
T Consensus 232 G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~Ga~~ 304 (319)
T 3lhx_A 232 GADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AENAAKRGHLTASTVIQYRGAII 304 (319)
T ss_dssp TTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSC
T ss_pred CCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhhccCCCcC
Confidence 99999999888655 88886 678999999999999999999999999 99999999999999999999874
No 20
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=8e-49 Score=371.68 Aligned_cols=301 Identities=23% Similarity=0.332 Sum_probs=261.6
Q ss_pred CCCcEEEEccceeecccCCCC-------CCccCC---------------CCccccCCChHHHHHHHHHHcCCceEEEeec
Q 016868 59 ESPLVVCFGEMLIDFVPTVSG-------LSLAES---------------PAFKKAPGGAPANVAVGIARLGGSSAFIGKV 116 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~-------~~~~~~---------------~~~~~~~GG~~~NvA~~la~LG~~v~li~~v 116 (381)
++++|+|+|++++|++..++. .+.... ......+||++.|+|++|++||.++.++|.+
T Consensus 24 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~v 103 (352)
T 4e3a_A 24 TRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNV 103 (352)
T ss_dssp CSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECCC
T ss_pred CcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 347899999999999988875 222210 1335789999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEcccc
Q 016868 117 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSIS 196 (381)
Q Consensus 117 G~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~ 196 (381)
|+|.+|+++++.|++.||+++++.+.++.+|+.++++++++|+|++..+ .++...++++++..+.+++++++|++++.
T Consensus 104 G~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~G~~ 181 (352)
T 4e3a_A 104 AADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTY--LGACVELGPEDVEADVVADAKVTYFEGYL 181 (352)
T ss_dssp CSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHHTEEEEEEEGGG
T ss_pred CCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEec--cChhhcCChhhCCHHHHhhCCEEEEeeee
Confidence 9999999999999999999999988778899999999999999998876 45666788888888889999999999987
Q ss_pred ccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHhhccCCCCCChHHHHH
Q 016868 197 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEISFLTQGEDPYDDAVVY 274 (381)
Q Consensus 197 ~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 274 (381)
+..+.+.+.+.++++.+++.|+++++||.... ..+..++.+.++++ ++|++++|++|++.|++..+ .+++++
T Consensus 182 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~~~--~~~a~~ 255 (352)
T 4e3a_A 182 WDPPRAKEAILDCARIAHQHGREMSMTLSDSF----CVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDD--FEEALN 255 (352)
T ss_dssp GSSSSHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTCSC--HHHHHH
T ss_pred cCCchHHHHHHHHHHHHHHcCCEEEEECCchh----hHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCCCC--HHHHHH
Confidence 66677788899999999999999999996311 12345677888998 89999999999999998754 356677
Q ss_pred HHHhcCCCEEEEEecCCceEEEeCCceEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 016868 275 KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 353 (381)
Q Consensus 275 ~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~A 353 (381)
.+.+ +++.||||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|
T Consensus 256 ~l~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~-------l~~a~~~A~~aA 327 (352)
T 4e3a_A 256 RIAA-DCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS-------LEDCGKLGCLAA 327 (352)
T ss_dssp HHHH-HSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHH
T ss_pred HHhc-CCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 6655 7899999999999999999999999999986 899999999999999999999999 999999999999
Q ss_pred HHHhhhcCCCCCCCCHHHHHHH
Q 016868 354 ALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 354 a~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+.++++.|+.+..|.++++++.
T Consensus 328 a~~v~~~G~~~~~~~~~~~~~~ 349 (352)
T 4e3a_A 328 GIVIQQIGPRPMTSLSEAAKQA 349 (352)
T ss_dssp HHHTTSSSSSCSSCHHHHHHHT
T ss_pred HHHHcCCCCCCCcCHHHHHHHh
Confidence 9999999999988888877653
No 21
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.1e-48 Score=369.44 Aligned_cols=293 Identities=24% Similarity=0.308 Sum_probs=255.4
Q ss_pred CCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
++++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~GV 107 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGI 107 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTE
T ss_pred cCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 3468999999999999887765543 234567889999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 214 (381)
+++++.+.++.+|++++++++++|+++++.++. .+..++++++..+.+++++++|++++. ++...++++.++
T Consensus 108 d~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~--~~~~~~~~~l~~~~l~~~~~v~~~~~~------~~~~~~~~~~a~ 179 (343)
T 2rbc_A 108 DTSGMTVAPGARSALSTIIIDNRGERLIVPFYD--HRLHEKKRACTPEDIALFDAVLVDVRW------PELALDVLTVAR 179 (343)
T ss_dssp ECTTCEEETTCCCEEEEEEECTTSCEEEEEECC--GGGGSSCCCCCHHHHTTCSEEEECSSS------HHHHHHHHHHHH
T ss_pred ceeeEEEcCCCCCceEEEEECCCCCEEEEEcCC--CcccCChhHhcHhhhCCCCEEEEcCCC------HHHHHHHHHHHH
Confidence 999999888889999999999899999876644 444566666666678899999998753 246778889999
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHH-HhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCC-CEEEEEecCCc
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILS-IWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL-KLLLVTEGPDG 292 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G 292 (381)
+.++++++||... .+.+.+ +++++|++++|++|++.|++.. +.+++++.|.+.|+ +.||||+|++|
T Consensus 180 ~~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~--~~~~~~~~l~~~g~~~~VvvT~G~~G 247 (343)
T 2rbc_A 180 ALGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTGLE--TVKDMLPVLHARYPQTFIAVTAGPAG 247 (343)
T ss_dssp HTTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHCCS--SHHHHHHHHHHHSTTSEEEEECGGGC
T ss_pred HCCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcCCC--CHHHHHHHHHHhCCCceEEEEECCcc
Confidence 9999999999631 234556 8899999999999999999875 34677888989999 99999999999
Q ss_pred eEEEeCC--ceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHH
Q 016868 293 CRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTRE 370 (381)
Q Consensus 293 ~~~~~~~--~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~ 370 (381)
+++++++ +.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+.+++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ 320 (343)
T 2rbc_A 248 CWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-------SRAAVRLSSVAAALKCTVFGGRIGAPTRE 320 (343)
T ss_dssp EEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSGGGGCCCHH
T ss_pred eEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCccCCCCHH
Confidence 9999887 78899999999999999999999999999999999 99999999999999999999987789999
Q ss_pred HHHHHHhC
Q 016868 371 AVLNAIHA 378 (381)
Q Consensus 371 ~v~~~l~~ 378 (381)
++++++++
T Consensus 321 ev~~~l~~ 328 (343)
T 2rbc_A 321 ETEEAMRQ 328 (343)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998864
No 22
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=8.4e-49 Score=368.40 Aligned_cols=299 Identities=19% Similarity=0.212 Sum_probs=256.6
Q ss_pred CCCCcEEEEccceeecccCCCCCCccC---CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
.++++|+|+|++++|++...++.|... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv 83 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGY 83 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTE
T ss_pred CCCCcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCC
Confidence 345799999999999998877766432 12467899999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
+++++...++.+|+.++++++++|++++.+. ++.+...++++.+. .+.+..++++++++.. + +.+..+++
T Consensus 84 ~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~l~~- 155 (328)
T 3kzh_A 84 HMDDSMVIEGGSTPTYLAILDENGEMVSAIA-DMKSIGAMNTDFIDSKREIFENAEYTVLDSDN-----P-EIMEYLLK- 155 (328)
T ss_dssp ECTTCEECTTCCCCEEEEEECTTSCEEEEEE-ECGGGGGCCHHHHHHTHHHHHTCSEEEEESSC-----H-HHHHHHHH-
T ss_pred CccceEEeCCCCCeeEEEEEcCCCCEEEEEE-chhhhhhCCHHHHHHHHHhhccCCEEEEeCCc-----H-HHHHHHHH-
Confidence 9999988888899999999999999988553 24555567776654 2567889999987632 2 56666666
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEec
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEG 289 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G 289 (381)
+++.++++++||+. ....+.+.++++++|++++|++|++.|++....+. .++++.|.+.|++.|+||+|
T Consensus 156 a~~~~~~v~~D~~~--------~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 227 (328)
T 3kzh_A 156 NFKDKTNFILDPVS--------AEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFISLD 227 (328)
T ss_dssp HHTTTSEEEEECCS--------HHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEECG
T ss_pred HhhcCCcEEEEeCC--------HHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 88899999999963 22344566788999999999999999999765433 35667888899999999999
Q ss_pred CCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCH
Q 016868 290 PDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 369 (381)
Q Consensus 290 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~ 369 (381)
++|++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.++.|++
T Consensus 228 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~~~~ 300 (328)
T 3kzh_A 228 ADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-------IEDIVKFAMTMSNITISHEETIHPDMAL 300 (328)
T ss_dssp GGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSCTTCSH
T ss_pred CCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCcCCH
Confidence 999999998888999999999999999999999999999999999 9999999999999999999999899999
Q ss_pred HHHHHHHhCC
Q 016868 370 EAVLNAIHAP 379 (381)
Q Consensus 370 ~~v~~~l~~~ 379 (381)
+++++++++.
T Consensus 301 ~~v~~~~~~~ 310 (328)
T 3kzh_A 301 DTVLAKLEKT 310 (328)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhhhc
Confidence 9999999864
No 23
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=1.5e-48 Score=362.02 Aligned_cols=281 Identities=21% Similarity=0.264 Sum_probs=247.2
Q ss_pred CCCcEEEEccceeecccCCCCCCccC----CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
|+|+|+|+|++++|++..++..|... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+++||
T Consensus 1 M~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv 80 (299)
T 3ikh_A 1 MSLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPL 80 (299)
T ss_dssp -CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSC
T ss_pred CCceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCC
Confidence 45789999999999999888776542 23567899999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
+++++. .++.+|+.++++++++|++++..+ .+++..+++++++ .+.+++++++++++. .+.+.+.++++.
T Consensus 81 ~~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~--~~a~~~l~~~~~~~~~~~~~~~~~v~~~g~-----~~~~~~~~~~~~ 152 (299)
T 3ikh_A 81 MLLPDG-HFNQHSDTSIILNSADGDNAIITT--TAAADTFSLDEMIPHMADAVAGDILLQQGN-----FSLDKTRALFQY 152 (299)
T ss_dssp EEESSS-CCSSCCEEEEEECSSSCSCEEEEE--CHHHHHCCHHHHGGGGTTCCTTCEEEECSC-----SCHHHHHHHHHH
T ss_pred ceeeeE-ecCCCCcEEEEEEcCCCCeEEEEe--CCccccCCHHHHHHHHhhhccCCEEEECCC-----CCHHHHHHHHHH
Confidence 999885 567799999999999999998776 4566668887765 346789999998763 245778899999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCc
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDG 292 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 292 (381)
+++.++++++||+... +.+.++++++|++++|++|++.|++ .|++.|+||+|++|
T Consensus 153 a~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g---------------~g~~~vvvt~G~~G 207 (299)
T 3ikh_A 153 ARSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP---------------YGVKTLVITQGAAG 207 (299)
T ss_dssp HHHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC---------------CSCSEEEEECGGGC
T ss_pred HHHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc---------------CCCCEEEEEECCCc
Confidence 9999999999997542 2345678999999999999999987 68899999999999
Q ss_pred eEEEeCCceEEEccccccccCCCCccHHHHH-HHHHHHHcCCccccchHHHHH-HHHHHHHHHHHHhhhcCCCCCCCCHH
Q 016868 293 CRYYTKDFSGRVQGLKVEAVDATGAGDAFVA-GILSQLSTDFSLLQKEDQLRD-ALRFANACGALTVMERGAIPALPTRE 370 (381)
Q Consensus 293 ~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a-g~l~~l~~g~~~~~~~~~l~~-al~~A~~~Aa~~~~~~G~~~~~~~~~ 370 (381)
++++++++.+++|+++++++||+||||+|+| +|+++|++|++ +++ |+++|+++|++++++.|+.+++|+++
T Consensus 208 ~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~-------~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ 280 (299)
T 3ikh_A 208 AWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVA-------PDALALAHASRAAAITVSRRGTLSAFPGSR 280 (299)
T ss_dssp EEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSS-------SCHHHHHHHHHHHHHHHHSSSSTTTSCCHH
T ss_pred eEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCCCcccccCCCHH
Confidence 9999988899999999999999999999999 99999999999 999 99999999999999999998899999
Q ss_pred HHHHHHhCC
Q 016868 371 AVLNAIHAP 379 (381)
Q Consensus 371 ~v~~~l~~~ 379 (381)
||++++++.
T Consensus 281 ev~~~l~~~ 289 (299)
T 3ikh_A 281 ELAALLTTD 289 (299)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHhc
Confidence 999998753
No 24
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=3.7e-48 Score=359.94 Aligned_cols=289 Identities=26% Similarity=0.377 Sum_probs=247.6
Q ss_pred CcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 6 ~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~ 85 (302)
T 2c4e_A 6 EKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNLDINI 85 (302)
T ss_dssp EEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHHTTCBC
T ss_pred CcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHHcCCcc
Confidence 47999999999999877766543 23457788999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHC
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA 216 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~ 216 (381)
+++...++.+|+.++++++++|++++..+. +++..+++++++. .+++++|+++. . ++.+.++++.+++.
T Consensus 86 ~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~---~~~~~v~~~~~-----~-~~~~~~~~~~a~~~ 154 (302)
T 2c4e_A 86 SKLYYSEEEETPKAWIFTDKDNNQITFFLW--GAAKHYKELNPPN---FNTEIVHIATG-----D-PEFNLKCAKKAYGN 154 (302)
T ss_dssp TTCEECSSSCCCEEEEEECSSCCEECCEEC--GGGGGGGGCCCCC---CCEEEEEECSS-----C-HHHHHHHHHHHBTT
T ss_pred cceEeeCCCCCceEEEEECCCCCEEEEEeC--ChhhhCCHhhcCc---ccCCEEEEeCC-----C-cHHHHHHHHHHHhc
Confidence 999888888899999999889999887763 3554566655543 67899998753 1 26778889999999
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEE
Q 016868 217 GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296 (381)
Q Consensus 217 g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 296 (381)
+ ++++||+.+...|. .+.+.++++++|++++|++|++.|++....+.. .|++. ++.|+||+|++|++++
T Consensus 155 g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l~~~-~~~vvvt~G~~G~~~~ 223 (302)
T 2c4e_A 155 N-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNLLNFEID----DYLER-VDALIVTKGSKGSVIY 223 (302)
T ss_dssp B-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHH----HHHTT-CSEEEEECGGGCEEEE
T ss_pred C-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHH----HHHhc-CCEEEEEECCCceEEE
Confidence 9 99999985443332 345677889999999999999999876544322 66677 9999999999999999
Q ss_pred eCCceEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 297 TKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 297 ~~~~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
++++.+++|+++++ ++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+...+|++++++++
T Consensus 224 ~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~~ 296 (302)
T 2c4e_A 224 TKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASFVVEAKGCQTNLPTWDKVVER 296 (302)
T ss_dssp CSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHH
T ss_pred eCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccccccccCCCHHHHHHH
Confidence 88888899999998 999999999999999999999999 9999999999999999999998888999999998
Q ss_pred HhC
Q 016868 376 IHA 378 (381)
Q Consensus 376 l~~ 378 (381)
+++
T Consensus 297 ~~~ 299 (302)
T 2c4e_A 297 LEK 299 (302)
T ss_dssp HHH
T ss_pred HHh
Confidence 865
No 25
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=9.1e-48 Score=361.76 Aligned_cols=295 Identities=25% Similarity=0.354 Sum_probs=251.1
Q ss_pred CCCCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHC
Q 016868 57 TRESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKEN 132 (381)
Q Consensus 57 ~~~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~ 132 (381)
|+++++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~ 100 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQN 100 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTT
T ss_pred ccccCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHHc
Confidence 344578999999999999887766543 2335678899999999999999999999999999999999999999999
Q ss_pred CCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCccEEEEccccccCchhHHHHHHHH
Q 016868 133 NVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAA 210 (381)
Q Consensus 133 gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 210 (381)
||+++++.+.++.+|++++++++++|++++.++ .+++..+++++++. +.+++++++++++. .+.+.+..++
T Consensus 101 Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~l~~~~~v~~~~~-----~~~~~~~~~~ 173 (331)
T 2fv7_A 101 DISTEFTYQTKDAATGTASIIVNNEGQNIIVIV--AGANLLLNTEDLRAAANVISRAKVMVCQLE-----ITPATSLEAL 173 (331)
T ss_dssp TEECTTEEEESSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHHTHHHHHHCSEEEECSS-----SCHHHHHHHH
T ss_pred CCcceeeEecCCCCCceEEEEECCCCCeEEEec--CCccccCCHHHHHHHHHhhccCCEEEEecC-----CCHHHHHHHH
Confidence 999999998888899999999998899998876 34555677777653 35778999988642 2346778889
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCC---hHHHHHHHHhcCCCEEEEE
Q 016868 211 KAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---DDAVVYKLFHANLKLLLVT 287 (381)
Q Consensus 211 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvt 287 (381)
+.+++.++++++||+.+...|. .++++++|++++|++|++.|++....+ ..++++.|.+.|++.|+||
T Consensus 174 ~~a~~~g~~v~~Dp~~~~~~~~---------~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT 244 (331)
T 2fv7_A 174 TMARRSGVKTLFNPAPAIADLD---------PQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIIT 244 (331)
T ss_dssp HHHHHTTCEEEECCCSCCTTCC---------THHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHcCCEEEEeCCcccccch---------HHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999986533222 256789999999999999999875433 2456678888999999999
Q ss_pred ecCCceEEEeCC--ceEEEccccccccCCCCccHHHHHHHHHHHHcC--CccccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 288 EGPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD--FSLLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 288 ~G~~G~~~~~~~--~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g--~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
+|++|+++++++ +.+++|+++++++||+||||+|+|+|+++|++| ++ +++|+++|+++|+.++++.|+.
T Consensus 245 ~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~-------~~~a~~~A~~~aa~~v~~~G~~ 317 (331)
T 2fv7_A 245 LGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LEDMLNRSNFIAAVSVQAAGTQ 317 (331)
T ss_dssp CGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHHHHHHHHHHHHHHHTSSSGG
T ss_pred ECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCC-------HHHHHHHHHHHHHHHhCCCCCc
Confidence 999999999887 788999999999999999999999999999999 99 9999999999999999999998
Q ss_pred CCCCCHHHHHH
Q 016868 364 PALPTREAVLN 374 (381)
Q Consensus 364 ~~~~~~~~v~~ 374 (381)
+.+|+++++++
T Consensus 318 ~~~p~~~ev~~ 328 (331)
T 2fv7_A 318 SSYPYKKDLPL 328 (331)
T ss_dssp GGCCCGGGSCG
T ss_pred cCCCCHHHHhh
Confidence 78899988754
No 26
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2e-47 Score=357.33 Aligned_cols=297 Identities=20% Similarity=0.162 Sum_probs=246.9
Q ss_pred CCcEEEEccceeecccCCCCCCccC---CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
|++|+|+|++++|++...++.+... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+++||++
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~ 82 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVED 82 (317)
T ss_dssp CCEEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCCCC
Confidence 3589999999999998776544332 1236788999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
++ ...++.+|++++++++++|++++.++. ...+..++++.+.. +.+..++++++++. .+.+.+..+++.
T Consensus 83 ~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~ 155 (317)
T 2nwh_A 83 TP-FTFLDRRTPSYTAILERDGNLVIALAD-MDLYKLFTPRRLKVRAVREAIIASDFLLCDAN-----LPEDTLTALGLI 155 (317)
T ss_dssp CC-EEETTSCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHTSHHHHHHHHHCSEEEEETT-----SCHHHHHHHHHH
T ss_pred CC-cccCCCCCceEEEEEcCCCCEEEEEcc-hHHHhhCCHHHhhhhhhhhHhccCCEEEEeCC-----CCHHHHHHHHHH
Confidence 98 556677999999999989999876653 33444577665542 45778999988642 245778889999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCc
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDG 292 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 292 (381)
+++.++++++||+. . ...+.+.++++++|++++|++|++.|++....+..++++.+.+.|++.|+||+|++|
T Consensus 156 a~~~g~~v~~Dp~~-------~-~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 227 (317)
T 2nwh_A 156 ARACEKPLAAIAIS-------P-AKAVKLKAALGDIDILFMNEAEARALTGETAENVRDWPNILRKAGLSGGVVTRGASE 227 (317)
T ss_dssp HHHTTCCEEEECCS-------H-HHHGGGTTTGGGCSEEEEEHHHHHHHHC-----CTTHHHHHHHTTCCCEEEEETTTE
T ss_pred HHhcCCeEEEeCCC-------H-HHHHHHHHHhhhCeEecCCHHHHHHHhCCChhHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 99999999999962 1 123445678899999999999999999873333345778888899999999999999
Q ss_pred eEEEeCC-ceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHH
Q 016868 293 CRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREA 371 (381)
Q Consensus 293 ~~~~~~~-~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~ 371 (381)
+++++++ ..+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+..++|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~~~~~~ 300 (317)
T 2nwh_A 228 VVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-------IREALRQGAAAAAITVQSSFATSQDLSKDS 300 (317)
T ss_dssp EEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHSSTTCCGGGCCHHH
T ss_pred EEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9998866 46889999999999999999999999999999999 999999999999999999999987899999
Q ss_pred HHHHHhC
Q 016868 372 VLNAIHA 378 (381)
Q Consensus 372 v~~~l~~ 378 (381)
+++++..
T Consensus 301 v~~~~~~ 307 (317)
T 2nwh_A 301 VEAMLGL 307 (317)
T ss_dssp HHHHHTT
T ss_pred HHhHhhh
Confidence 9986543
No 27
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.4e-46 Score=350.63 Aligned_cols=291 Identities=22% Similarity=0.308 Sum_probs=249.3
Q ss_pred CCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCc-eEEEeecCCChHHHHHHHHHHHCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGS-SAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~-v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
|-++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.+ +.++|.+|+|.+|+++++.|++.|
T Consensus 13 ~~~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~g 92 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLG 92 (311)
T ss_dssp CCCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTT
T ss_pred ccCCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHCC
Confidence 5578999999999999988877654 23457788999999999999999999 999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
| ++.+.++.+|+.++++++++|++++..++ +++..+++++++.+.+++++++++++.. +.+.+. +.+
T Consensus 93 V---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~---~~a 159 (311)
T 1vm7_A 93 I---TGYIRVSLPTGRAFIEVDKTGQNRIIIFP--GANAELKKELIDWNTLSESDILLLQNEI-----PFETTL---ECA 159 (311)
T ss_dssp E---EEEEECSSCCCEEEEEECTTSCEEEEEEC--GGGGGCCGGGCCHHHHTTCSEEEECSSS-----CHHHHH---HHH
T ss_pred C---EEEEcCCCCCeEEEEEECCCCCEEEEEec--CccccCCHHHhChhhcccCCEEEEeCCC-----CHHHHH---HHH
Confidence 9 67776778999999999988999988873 5666688877766678899999987532 233333 337
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC---CCChHHHHHHHHhcCCCEEEEEecC
Q 016868 214 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DPYDDAVVYKLFHANLKLLLVTEGP 290 (381)
Q Consensus 214 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~~~g~~~vvvt~G~ 290 (381)
++.++++++||+.... .+.++++++|++++|++|++.|++.. ..+..++++.|.+.|++.|+||+|+
T Consensus 160 ~~~~~~v~~Dp~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~ 229 (311)
T 1vm7_A 160 KRFNGIVIFDPAPAQG----------INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGD 229 (311)
T ss_dssp HHCCSEEEECCCSCTT----------CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEECGG
T ss_pred HHcCCEEEEeCcchhh----------hhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECC
Confidence 8889999999985322 22367899999999999999998752 2334677888989999999999999
Q ss_pred CceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHH
Q 016868 291 DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTRE 370 (381)
Q Consensus 291 ~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~ 370 (381)
+|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.+++|+++
T Consensus 230 ~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ 302 (311)
T 1vm7_A 230 KGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTRLGAQSSIPARE 302 (311)
T ss_dssp GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSGGGCCCHH
T ss_pred CCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCcCCccccCCCHH
Confidence 99999988888899999999999999999999999999999999 99999999999999999999987889999
Q ss_pred HHHHHHhCC
Q 016868 371 AVLNAIHAP 379 (381)
Q Consensus 371 ~v~~~l~~~ 379 (381)
|++++++++
T Consensus 303 ev~~~l~~~ 311 (311)
T 1vm7_A 303 EVEAFLKNL 311 (311)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999998764
No 28
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=3.4e-47 Score=362.90 Aligned_cols=297 Identities=18% Similarity=0.230 Sum_probs=253.4
Q ss_pred CCCcEEEEccceeecccCCCC--------------------CCcc----CCCCccccCCChHHHHHHHHHHc---CCceE
Q 016868 59 ESPLVVCFGEMLIDFVPTVSG--------------------LSLA----ESPAFKKAPGGAPANVAVGIARL---GGSSA 111 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~NvA~~la~L---G~~v~ 111 (381)
++.+|+|+|++++|++..++. .|.. ....+...+||++.|+|++|++| |.++.
T Consensus 23 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~ 102 (370)
T 3vas_A 23 SEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCS 102 (370)
T ss_dssp CTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEE
T ss_pred CCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEE
Confidence 346899999999999998874 2222 23567889999999999999999 99999
Q ss_pred EEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcCCc
Q 016868 112 FIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKA 187 (381)
Q Consensus 112 li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~~~ 187 (381)
++|.||+|.+|+++++.|++.||+++++...++.+|+.++++++ +|+|+++.+ .+++..+++++++. +.++++
T Consensus 103 ~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~--~ga~~~l~~~~~~~~~~~~~~~~~ 179 (370)
T 3vas_A 103 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKA 179 (370)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHC
T ss_pred EEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc--cchhhhCCHHHcCchhhHHHHhhC
Confidence 99999999999999999999999999988767779999999998 899998876 45666788887764 568899
Q ss_pred cEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCC-
Q 016868 188 KIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED- 266 (381)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~- 266 (381)
+++|++++.+. .+.+.+.++++.+++.|+++++|+.. +.| .+..++.+.++++++|++++|++|++.|++...
T Consensus 180 ~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~ld~~~--~~~--~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~ 253 (370)
T 3vas_A 180 QVYYIAGFVIN--TCYEGMLKIAKHSLENEKLFCFNLSA--PFL--SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGL 253 (370)
T ss_dssp SEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCC--HHH--HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTC
T ss_pred CEEEEEeeecc--CCHHHHHHHHHHHHHcCCEEEEECCc--HHH--HHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCC
Confidence 99999987543 45678889999999999999999852 111 123356778899999999999999999987632
Q ss_pred --CChHHHHHHHHhc-------CCCEEEEEecCCceEEEe--CCceEEEccccc---cccCCCCccHHHHHHHHHHHHcC
Q 016868 267 --PYDDAVVYKLFHA-------NLKLLLVTEGPDGCRYYT--KDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTD 332 (381)
Q Consensus 267 --~~~~~~~~~l~~~-------g~~~vvvt~G~~G~~~~~--~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g 332 (381)
.+.+++++.|.+. +++.||||+|++|+++++ +++.+++|++++ +++||+||||+|+|||+++|++|
T Consensus 254 ~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g 333 (370)
T 3vas_A 254 LEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRG 333 (370)
T ss_dssp CSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTT
T ss_pred CccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCC
Confidence 3346677888874 899999999999999999 778889999987 89999999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 333 FSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 333 ~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
++ +++|+++|+++|++++++.|+. +|++++++
T Consensus 334 ~~-------l~~a~~~A~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 334 KP-------MITSLHAAVKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp CC-------HHHHHHHHHHHHHHHHTSSSSC--CCCGGGGC
T ss_pred CC-------HHHHHHHHHHHHHHHHcccCCc--CCCCccce
Confidence 99 9999999999999999999985 57777764
No 29
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=3.6e-45 Score=346.91 Aligned_cols=309 Identities=22% Similarity=0.294 Sum_probs=256.1
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
..|+|+++|+.+.++..... .+......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++++
T Consensus 11 ~~~~~~~~ge~l~~~~~~~~-~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~ 89 (351)
T 2afb_A 11 HHMKVVTFGEIMLRLSPPDH-KRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDY 89 (351)
T ss_dssp CCCEEEEESCCEEEEECSTT-CCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred ccceEEEechhhheecCCCC-ccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCccee
Confidence 56899999999999775322 23333456788999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCceEEEEEecCCCCceEEE-ecCCCccccCChhccch-hhcCCccEEEEccccc-cCchhHHHHHHHHHHHHH
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMF-YRNPSADMLLQEAELDL-SLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~ 215 (381)
+.. .+.+|+++++..+.+++++++. .+...+...++++++.. ..+++++++|++++.. ..+...+.+.++++.+++
T Consensus 90 v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~ 168 (351)
T 2afb_A 90 IAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANE 168 (351)
T ss_dssp EEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHH
T ss_pred EEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHH
Confidence 987 4679999988776544444433 33334445566766654 3468999999988754 345556888899999999
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC---------C---hHHHHHHHHhc-CCC
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP---------Y---DDAVVYKLFHA-NLK 282 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~---------~---~~~~~~~l~~~-g~~ 282 (381)
.++++++||+.+..+|. .+..++.+.++++++|++++|++|++.|++.... + ..++++.|.+. |++
T Consensus 169 ~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 247 (351)
T 2afb_A 169 KGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFK 247 (351)
T ss_dssp HTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHHHHHHHCCS
T ss_pred cCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHHHHHHcCCC
Confidence 99999999998888885 3456677888999999999999999999987653 2 23556777764 999
Q ss_pred EEEEEecCCce--------EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 016868 283 LLLVTEGPDGC--------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354 (381)
Q Consensus 283 ~vvvt~G~~G~--------~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa 354 (381)
.|+||+|++|+ +++.+++.+++|+++++++|||||||+|+|+|+++|++|++ +++|+++|+++|+
T Consensus 248 ~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A~~~aa 320 (351)
T 2afb_A 248 TVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD-------SQKKAEFAAAASC 320 (351)
T ss_dssp EEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHH
T ss_pred EEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 99999999975 77777778899999999999999999999999999999999 9999999999999
Q ss_pred HHhhhcCCCCCCCCHHHHHHHHhC
Q 016868 355 LTVMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 355 ~~~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
+++++.|+.. +|++++|++++++
T Consensus 321 ~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 321 LKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp HHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred HHhCCCCCCC-CCCHHHHHHHHhc
Confidence 9999999874 7999999999864
No 30
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2.9e-46 Score=346.15 Aligned_cols=287 Identities=25% Similarity=0.346 Sum_probs=235.4
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
|+++|+|+|++++|+++. ...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.|| ++
T Consensus 2 m~~~v~viG~~~~D~~p~------------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~ 67 (296)
T 2qhp_A 2 MNNIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL--KN 67 (296)
T ss_dssp -CCEEEEESCCEEEEETT------------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC--CE
T ss_pred CcceEEEEchhheEecCC------------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC--CE
Confidence 346899999999999842 2579999999999999999999999999999999999999999999 77
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH-CC
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD-AG 217 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~-~g 217 (381)
+.+.++.+|+++++.++++|++++.++.. .....+.+.+...+.+++++++|++++....+.+.+.+.++++.+++ .+
T Consensus 68 v~~~~~~~T~~~~v~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~ 146 (296)
T 2qhp_A 68 QIERVDYPTGTVQVTLDDEGVPCYEIKEG-VAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDG 146 (296)
T ss_dssp EEEEESSCCEEEEEC------CCEEECSS-CGGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTS
T ss_pred EeecCCCCceEEEEEECCCCCEEEEEecC-ChhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCC
Confidence 87777789999999888889988877533 22333433222345678999999998765566677888888988887 69
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC---CCChHHHHHHHHhc-CCCEEEEEecCCce
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DPYDDAVVYKLFHA-NLKLLLVTEGPDGC 293 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~~~-g~~~vvvt~G~~G~ 293 (381)
.++++||+.+..+|. .+.+.++++++|++++|++|++.|++.. ..+.+++++.+.+. |++.|+||+|++|+
T Consensus 147 ~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~ 221 (296)
T 2qhp_A 147 QLKIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGS 221 (296)
T ss_dssp CEEEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGGGCE
T ss_pred CEEEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecCCCe
Confidence 999999998877663 2456678899999999999999998742 23446677888774 99999999999999
Q ss_pred EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 294 RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 294 ~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
+++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+| +++.
T Consensus 222 ~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~--~~l~ 292 (296)
T 2qhp_A 222 YVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKS-------VPEAHKLAVEVSAYVCTQSGAMPELP--VILK 292 (296)
T ss_dssp EEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHHHHHTSSSSSCCCC--HHHH
T ss_pred EEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCc--HHHH
Confidence 99998888899999999999999999999999999999999 99999999999999999999986544 4444
Q ss_pred H
Q 016868 374 N 374 (381)
Q Consensus 374 ~ 374 (381)
+
T Consensus 293 ~ 293 (296)
T 2qhp_A 293 D 293 (296)
T ss_dssp G
T ss_pred h
Confidence 3
No 31
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=3.8e-46 Score=349.84 Aligned_cols=289 Identities=24% Similarity=0.355 Sum_probs=242.4
Q ss_pred CcEEEEccceeecccCC----------CCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCC-ChHHHHH
Q 016868 61 PLVVCFGEMLIDFVPTV----------SGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA-DEFGYML 125 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~----------~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~-D~~g~~i 125 (381)
|+|+|+|++++|++..+ +..|.. ....+...+||++.|+|++|++||.++.++|.+|+ | +|+ +
T Consensus 1 m~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~-i 78 (326)
T 3b1n_A 1 MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQP-Y 78 (326)
T ss_dssp -CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHH-H
T ss_pred CcEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHH-H
Confidence 37999999999999877 444433 12456788999999999999999999999999999 9 899 9
Q ss_pred HHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHH
Q 016868 126 ADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSA 205 (381)
Q Consensus 126 ~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~ 205 (381)
++.|++.||+++++.+.++.+|+.+++.++++|++.+.++ +++...+.++++... ++++++|+++. .++.
T Consensus 79 ~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~~~~~~~~~~--~~~~~v~~~~~------~~~~ 148 (326)
T 3b1n_A 79 LDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAGEA--KDIKLAIVGPD------GFQG 148 (326)
T ss_dssp HHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEE--CGGGGGGGGSCGGGC--CSCSEEEECSC------CHHH
T ss_pred HHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEe--cChhhhcChhhcccc--cCCCEEEECCc------cHHH
Confidence 9999999999999988888899999999998898887665 344444555555422 78999998753 2467
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEE
Q 016868 206 HIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLL 285 (381)
Q Consensus 206 ~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vv 285 (381)
+.++++.+++.++++++||+.+..+|. .+.+.++++++|++++|++|++.|++....+.+ .+.+. ++.||
T Consensus 149 ~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~----~l~~~-~~~vv 218 (326)
T 3b1n_A 149 MVQHTEELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDKTGWSED----EIASR-VQALI 218 (326)
T ss_dssp HHHHHHHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCHH----HHHTT-SSEEE
T ss_pred HHHHHHHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCCCCCCHH----HHHhc-CCEEE
Confidence 778899999999999999987665553 244567889999999999999999875433333 23343 89999
Q ss_pred EEecCCceEEEeCCceEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 286 VTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 286 vt~G~~G~~~~~~~~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+..
T Consensus 219 vT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~ 291 (326)
T 3b1n_A 219 ITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATAGRLASLMGALKIAHQGPQT 291 (326)
T ss_dssp EECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSTTC
T ss_pred EecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999998888899999986 789999999999999999999999 99999999999999999999988
Q ss_pred CCCCHHHHHHHHhC
Q 016868 365 ALPTREAVLNAIHA 378 (381)
Q Consensus 365 ~~~~~~~v~~~l~~ 378 (381)
.+|+++++++++++
T Consensus 292 ~~~~~~ev~~~l~~ 305 (326)
T 3b1n_A 292 YAPTRAEIDARFET 305 (326)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 88999999998764
No 32
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=4.5e-46 Score=350.61 Aligned_cols=291 Identities=23% Similarity=0.264 Sum_probs=245.1
Q ss_pred CcEEEEccceeecccCC----------CCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHH
Q 016868 61 PLVVCFGEMLIDFVPTV----------SGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLA 126 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~----------~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~ 126 (381)
|+|+|+|++++|++..+ +..|.. ....+...+||++.|+|++|++||.++.++|.+|+| +|+ ++
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~-i~ 88 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FAD-YR 88 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHH-HH
T ss_pred CeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHH-HH
Confidence 68999999999999876 444432 124567889999999999999999999999999999 999 99
Q ss_pred HHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchh--hcCCccEEEEccccccCchhHH
Q 016868 127 DILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS--LITKAKIFHYGSISLITEPCKS 204 (381)
Q Consensus 127 ~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~--~i~~~~~~~~~~~~~~~~~~~~ 204 (381)
+.|++.||+++++.+.++.+|+.++++++++|++.+.+++ ++...++++++... .+++++++|+++.. ++
T Consensus 89 ~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~~~~~~~~~~~~~l~~~~~v~~~~~~------~~ 160 (334)
T 2pkf_A 89 DWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYP--GAMSEARNIKLADVVSAIGKPELVIIGAND------PE 160 (334)
T ss_dssp HHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEEC--GGGGGGGGCCHHHHHHHHCSCSEEEEESCC------HH
T ss_pred HHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECC--chhhhCCHhhcChhhhhhcCCCEEEEcCCC------hH
Confidence 9999999999999988888999999999888998886663 34545555555432 35889999987642 45
Q ss_pred HHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEE
Q 016868 205 AHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLL 284 (381)
Q Consensus 205 ~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~v 284 (381)
.+.++++.+++.++++++||+.+..+|. .+.+.++++++|++++|++|++.|++....+.+ .+.+. ++.|
T Consensus 161 ~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l~~~-~~~v 230 (334)
T 2pkf_A 161 AMFLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEA----DVMAQ-IDLR 230 (334)
T ss_dssp HHHHHHHHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHHHCCCHH----HHHTT-CSCE
T ss_pred HHHHHHHHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhccCCCCHH----HHHhc-CCEE
Confidence 7778889999999999999987766663 245667899999999999999999876443322 34444 8899
Q ss_pred EEEecCCceEEEeCCc-eEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 285 LVTEGPDGCRYYTKDF-SGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 285 vvt~G~~G~~~~~~~~-~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
+||+|++|++++++++ .+++|+++++ ++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+
T Consensus 231 vvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~ 303 (334)
T 2pkf_A 231 VTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------LERSAQLGSLVAVLVLESTGT 303 (334)
T ss_dssp EEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSS
T ss_pred EEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999998877 8899999987 789999999999999999999999 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhC
Q 016868 363 IPALPTREAVLNAIHA 378 (381)
Q Consensus 363 ~~~~~~~~~v~~~l~~ 378 (381)
...+|+++++++++++
T Consensus 304 ~~~~p~~~ev~~~l~~ 319 (334)
T 2pkf_A 304 QEWQWDYEAAASRLAG 319 (334)
T ss_dssp SCCCCCHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHH
Confidence 9889999999998754
No 33
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=8.6e-45 Score=339.99 Aligned_cols=290 Identities=21% Similarity=0.195 Sum_probs=243.1
Q ss_pred CCcEEEEccceeec-ccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCC
Q 016868 60 SPLVVCFGEMLIDF-VPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135 (381)
Q Consensus 60 ~~~vlviG~~~iD~-~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~ 135 (381)
.|-+.|.+++++|+ +..++..... ....+...+||++.|+|.+|++||.++.++|.+|+| +|+++++.|++.||+
T Consensus 2 ~mi~tvt~np~iD~~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~ 80 (320)
T 3ie7_A 2 SLIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHIN 80 (320)
T ss_dssp CCEEEEESSCEEEEEEEESSSCCTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTCC
T ss_pred ceEEEEecchHHeeeEEEcCCccCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCc
Confidence 36677889999999 9888876332 244578899999999999999999999999999999 999999999999999
Q ss_pred CCCeeecCCCCceEEEEEecCCCC--ceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHH
Q 016868 136 GAGMRFDPGARTALAFVTLRSDGE--REFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHI 207 (381)
Q Consensus 136 ~~~v~~~~~~~t~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~ 207 (381)
++++...++ +|+.++++++ +|+ ++++.. .+. .+++++++. +.++++++++++++.. ...+.+.+.
T Consensus 81 ~~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~ 153 (320)
T 3ie7_A 81 HDFLVEAGT-STRECFVVLS-DDTNGSTMIPE--AGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGSPP-PHYTLSDFK 153 (320)
T ss_dssp BCCEEETTC-CCEEEEEEEE-TTCSCCEEEEC--CCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESCCC-TTCCHHHHH
T ss_pred eEEEEecCC-CCceEEEEEE-CCCceeEEEeC--CCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCC-CCCCHHHHH
Confidence 999955555 8999999888 788 777654 232 366655542 5678999999977633 344567888
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEE
Q 016868 208 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLV 286 (381)
Q Consensus 208 ~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvv 286 (381)
++++.+++.|+++++||+ . +.+.+.+. .+|++++|++|++.|+|.......+.+.++.+. ++.|+|
T Consensus 154 ~~~~~a~~~g~~v~~D~~--------~----~~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~-~~~vvv 220 (320)
T 3ie7_A 154 ELLRTVKATGAFLGCDNS--------G----EYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENIRTLAEK-IPYLVV 220 (320)
T ss_dssp HHHHHHHHHTCEEEEECC--------H----HHHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHHHHHHHTTT-CSEEEE
T ss_pred HHHHHHHhcCCEEEEECC--------h----HHHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHHHHHHHHhh-CCEEEE
Confidence 999999999999999995 1 13344454 899999999999999998765233344455555 899999
Q ss_pred EecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 016868 287 TEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPAL 366 (381)
Q Consensus 287 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~ 366 (381)
|+|++|++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+ ..
T Consensus 221 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~--~~ 291 (320)
T 3ie7_A 221 SLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMP-------ITETLKVATGCSASKVMQQDS--SS 291 (320)
T ss_dssp ECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSS--SC
T ss_pred EcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCcCC--CC
Confidence 999999999999999999999999999999999999999999999999 999999999999999999994 67
Q ss_pred CCHHHHHHHHhCC
Q 016868 367 PTREAVLNAIHAP 379 (381)
Q Consensus 367 ~~~~~v~~~l~~~ 379 (381)
|++++++++++++
T Consensus 292 ~~~~ev~~~~~~~ 304 (320)
T 3ie7_A 292 FDLEAAGKLKNQV 304 (320)
T ss_dssp CCHHHHHHHGGGC
T ss_pred CCHHHHHHHhhCe
Confidence 9999999999875
No 34
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=1.3e-45 Score=349.29 Aligned_cols=292 Identities=18% Similarity=0.241 Sum_probs=244.0
Q ss_pred CCCcEEEEccceeecccCCCC--------------------CCcc----CCCCccccCCChHHHHHHHHHHc----CCc-
Q 016868 59 ESPLVVCFGEMLIDFVPTVSG--------------------LSLA----ESPAFKKAPGGAPANVAVGIARL----GGS- 109 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~NvA~~la~L----G~~- 109 (381)
+.++|+++|++++|++..++. .|.. +...+...+||++.|+|+++++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 346899999999999988874 2221 23467889999999999999999 999
Q ss_pred eEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcC
Q 016868 110 SAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLIT 185 (381)
Q Consensus 110 v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~ 185 (381)
+.++|.||+|.+|+++++.|++.||+++++. .++.+|++++++++ +|+|+++.+ .++...++++++.. +.++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~ 161 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVAD--LGAANHLSSEHMRSPAVVRAMD 161 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEE--EEGGGGCCHHHHTSHHHHHHHH
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeec--hhhhhcCCHHHcCchhhHHHHh
Confidence 9999999999999999999999999999985 56779999999998 899988765 45666688877763 5688
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCC-
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG- 264 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~- 264 (381)
+++++|++++.+. .+.+.+.++++.++++|+++++|+... .| .+..++.+.++++++|++++|++|++.|++.
T Consensus 162 ~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~ 235 (347)
T 3otx_A 162 ESRIFYFSGFTLT--VDVNHVLQACRKAREVDGLFMINLSAP--FI--MQFFSAQLGEVLPYTDIIVANRHEAKEFANMM 235 (347)
T ss_dssp HCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHH
T ss_pred hCCEEEEeeeecc--cCHHHHHHHHHHHHHhCCEEEeeCchh--hh--HHHHHHHHHHHHhhCCEEecCHHHHHHHhccc
Confidence 9999999987543 356788899999999999999998521 11 1233567888999999999999999999864
Q ss_pred --CCCChHHHHHHHH------hcCCCEEEEEecCCceEEEeCCceEEEccccc---cccCCCCccHHHHHHHHHHHHcCC
Q 016868 265 --EDPYDDAVVYKLF------HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDF 333 (381)
Q Consensus 265 --~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g~ 333 (381)
...+.+++++.|. +.+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~ 315 (347)
T 3otx_A 236 KWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGK 315 (347)
T ss_dssp TCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTC
T ss_pred CCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCC
Confidence 2244567778887 47899999999999999999988889999887 899999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCH
Q 016868 334 SLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 369 (381)
Q Consensus 334 ~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~ 369 (381)
+ +++|+++|+++|++++++.|+. +|++
T Consensus 316 ~-------l~~a~~~a~~~aa~~v~~~G~~--~p~~ 342 (347)
T 3otx_A 316 D-------LRRCCETGHYTAQEVIQRDGCS--FPEK 342 (347)
T ss_dssp C-------HHHHHHHHHHHHHHHHTCC------CCS
T ss_pred C-------HHHHHHHHHHHHHHHHcccCCC--CCCC
Confidence 9 9999999999999999999964 4543
No 35
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=1.2e-44 Score=340.38 Aligned_cols=289 Identities=17% Similarity=0.176 Sum_probs=237.9
Q ss_pred CcEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
|.++|+|++++|++..++..... ....+...+||++.|+|++|++||.++.++|.+|+ .+|+++++.|++.||+++
T Consensus 21 Mi~~v~G~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV~~~ 99 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADIKHA 99 (330)
T ss_dssp CEEEEESSCEEEEEEEESCCCTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCEEC
T ss_pred EEEEEecchhheEEEecCCccCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCCcee
Confidence 57779999999999887764222 23457788999999999999999999999999996 699999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHIAAAK 211 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 211 (381)
++...++ |++++++++++ ++++... .++ .+++++++. +.+++++++|+++.... +.+.+.+.++++
T Consensus 100 ~v~~~~~--t~~~~~~v~~~-~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~ 171 (330)
T 2jg1_A 100 FYNIKGE--TRNCIAILHEG-QQTEILE--QGP--EIDNQEAAGFIKHFEQMMEKVEAVAISGSLPK-GLNQDYYAQIIE 171 (330)
T ss_dssp CEEESSC--CEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHGGGCSEEEEESCCCB-TSCTTHHHHHHH
T ss_pred EEEccCC--CeeEEEEEeCC-CcEEEEC--CCC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CCCHHHHHHHHH
Confidence 9887654 67777777765 6654433 333 255555432 23688999998775432 344567888999
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh---hCCEEecCHHHHhhccCCCCC----ChHHHHHHHHhcCCCEE
Q 016868 212 AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE---TADIIKISEEEISFLTQGEDP----YDDAVVYKLFHANLKLL 284 (381)
Q Consensus 212 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~---~~dvl~~N~~E~~~l~~~~~~----~~~~~~~~l~~~g~~~v 284 (381)
.+++.|+++++||+ . +.+.++++ ++|++++|++|++.|++.... +..++++.|.+.|++.|
T Consensus 172 ~a~~~g~~v~~D~~--------~----~~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~~~V 239 (330)
T 2jg1_A 172 RCQNKGVPVILDCS--------G----ATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWI 239 (330)
T ss_dssp HHHTTTCCEEEECC--------H----HHHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGTTCSEE
T ss_pred HHHHCCCEEEEECC--------c----HHHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 99999999999996 1 13456666 899999999999999987543 23455677788899999
Q ss_pred EEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 285 LVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 285 vvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 240 vvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~G~~- 311 (330)
T 2jg1_A 240 IVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHEN-------DHDLLKKANTLGMLNAQEAQTG- 311 (330)
T ss_dssp EEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSS-
T ss_pred EEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCC-
Confidence 99999999999998888899999999999999999999999999999999 9999999999999999999984
Q ss_pred CCCCHHHHHHHHhCC
Q 016868 365 ALPTREAVLNAIHAP 379 (381)
Q Consensus 365 ~~~~~~~v~~~l~~~ 379 (381)
.|++++++++++++
T Consensus 312 -~~~~~ev~~~~~~i 325 (330)
T 2jg1_A 312 -YVNLNNYDDLFNQI 325 (330)
T ss_dssp -CCCGGGHHHHHTTC
T ss_pred -CCCHHHHHHHHhce
Confidence 68999999998875
No 36
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=2.9e-45 Score=349.10 Aligned_cols=288 Identities=19% Similarity=0.223 Sum_probs=239.8
Q ss_pred CCcEEEEccceeecccCCCCC-------Ccc-----------------CCCCccccCCChHHHHHHHHHHc---CCceEE
Q 016868 60 SPLVVCFGEMLIDFVPTVSGL-------SLA-----------------ESPAFKKAPGGAPANVAVGIARL---GGSSAF 112 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~-------~~~-----------------~~~~~~~~~GG~~~NvA~~la~L---G~~v~l 112 (381)
+.+|+++|++++|++..++.. ... +.......+||++.|+|+++++| |.++.+
T Consensus 23 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~ 102 (365)
T 3loo_A 23 DGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIF 102 (365)
T ss_dssp TTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEE
T ss_pred CccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEE
Confidence 357999999999999888762 111 11245688999999999999987 999999
Q ss_pred EeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcCCcc
Q 016868 113 IGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKAK 188 (381)
Q Consensus 113 i~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~~~~ 188 (381)
+|.||+|.+|+++++.|++.||+++++.. ++.+|++++++++ +++|+++.+ .+++..+++++++. +.+++++
T Consensus 103 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T 3loo_A 103 FGCVGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN--LAAANDFTPEHLRSDGNRAYLQGAQ 178 (365)
T ss_dssp EEEEESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE--CGGGGGCCGGGGGSHHHHHHHHHCS
T ss_pred EEEecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec--cchHhhCCHhHcCchhhHHHHhhCC
Confidence 99999999999999999999999999887 6779999999998 788888765 56666788887763 5678999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC---
Q 016868 189 IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE--- 265 (381)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~--- 265 (381)
++|++++.+. .+.+.+.++++.+++.|+++++|+.. +.| .+..++.+.++++++|++++|++|++.|++..
T Consensus 179 ~v~i~G~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~--~~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~ 252 (365)
T 3loo_A 179 FFYVSGFFFT--VSFESALSVAKEAAATGRMFMMNLSA--PFV--PQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYG 252 (365)
T ss_dssp EEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCS--THH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCC
T ss_pred EEEEeeeecc--CCHHHHHHHHHHHHHcCCEEEEECCc--hhh--hHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCC
Confidence 9999987542 45678889999999999999999852 111 13346678889999999999999999998753
Q ss_pred CCChHHHHHHHHhc------CCCEEEEEecCCceEEE--eCCceEEEccccc---cccCCCCccHHHHHHHHHHHHcCCc
Q 016868 266 DPYDDAVVYKLFHA------NLKLLLVTEGPDGCRYY--TKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFS 334 (381)
Q Consensus 266 ~~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~--~~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g~~ 334 (381)
..+.+++++.|.+. +++.||||+|++|++++ .+++.+++|++++ +++|||||||+|+|||+++|++|++
T Consensus 253 ~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~ 332 (365)
T 3loo_A 253 TEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRT 332 (365)
T ss_dssp CCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCC
Confidence 34456777888774 89999999999999999 7778889999988 8999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 335 LLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 335 ~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
+++|+++|+++|+.++++.|+..
T Consensus 333 -------l~~a~~~a~~~Aa~~v~~~G~~~ 355 (365)
T 3loo_A 333 -------VDVCIKCGIWAAREIIQRSGCTF 355 (365)
T ss_dssp -------HHHHHHHHHHHHHHHHHHGGGGG
T ss_pred -------HHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999863
No 37
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=3.9e-44 Score=333.90 Aligned_cols=290 Identities=22% Similarity=0.241 Sum_probs=239.8
Q ss_pred cEEEE-ccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCF-GEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlvi-G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+++ +++++|++..++..... ....+...+||++.|+|++|++||.++.++|.+|+| +|+++++.|+++||+++
T Consensus 3 ~i~~v~~n~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~ 81 (309)
T 3umo_A 3 RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVA 81 (309)
T ss_dssp CEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEE
T ss_pred cEEEEecchhheEEEEcCcccCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCceE
Confidence 45555 68999999988876332 355678999999999999999999999999999999 99999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch-----hhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL-----SLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
++...++.+++.++ +.+++|+++++.+. ++. +++++++. +.+..+++++++++. ..+.+.+.+.++++.
T Consensus 82 ~v~~~~~t~~~~~~-~~~~~g~~~~~~~~--g~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~ 155 (309)
T 3umo_A 82 TVEAKDWTRQNLHV-HVEASGEQYRFVMP--GAA--LNEDEFRQLEEQVLEIESGAILVISGSL-PPGVKLEKLTQLISA 155 (309)
T ss_dssp EEECSSCCCCCEEE-EETTTCCEEEEECC--CCC--CCHHHHHHHHHHHTTSCTTCEEEEESCC-CTTCCHHHHHHHHHH
T ss_pred EEEecCCCeeEEEE-EECCCCcEEEEEcC--CCC--CCHHHHHHHHHHHHhcCCCCEEEEEccC-CCCCCHHHHHHHHHH
Confidence 88876554444443 33447888877653 332 56655531 123577899998763 234556788899999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh--CCEEecCHHHHhhccCCCCC---ChHHHHHHHHhcCC-CEEEE
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET--ADIIKISEEEISFLTQGEDP---YDDAVVYKLFHANL-KLLLV 286 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~--~dvl~~N~~E~~~l~~~~~~---~~~~~~~~l~~~g~-~~vvv 286 (381)
+++.++++++||. .+.+.++++. +|++++|++|++.|++.... +..++++.|.+.+. +.|+|
T Consensus 156 a~~~~~~v~~D~~------------~~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vvv 223 (309)
T 3umo_A 156 AQKQGIRCIVDSS------------GEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVV 223 (309)
T ss_dssp HHHTTCEEEEECC------------HHHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEEE
T ss_pred HHhcCCEEEEECC------------cHHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 9999999999995 1245567777 59999999999999987643 23456788888887 89999
Q ss_pred EecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 016868 287 TEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPAL 366 (381)
Q Consensus 287 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~ 366 (381)
|+|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+. .
T Consensus 224 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~--~ 294 (309)
T 3umo_A 224 SLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR--L 294 (309)
T ss_dssp ECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSTTC--C
T ss_pred EcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCC--C
Confidence 999999999999889999999999999999999999999999999999 9999999999999999999985 6
Q ss_pred CCHHHHHHHHhCC
Q 016868 367 PTREAVLNAIHAP 379 (381)
Q Consensus 367 ~~~~~v~~~l~~~ 379 (381)
|+++||+++++++
T Consensus 295 ~~~~ev~~~l~~~ 307 (309)
T 3umo_A 295 CSHDDTQKIYAYL 307 (309)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 9999999999875
No 38
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=8.7e-44 Score=333.53 Aligned_cols=289 Identities=21% Similarity=0.202 Sum_probs=237.2
Q ss_pred CCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCC
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~ 135 (381)
+|.|+|+|++++|++..++. +.. ....+...+||++.|+|++|++||.++.++|.+|+ .+|+++++.|++.||+
T Consensus 2 ~m~i~v~g~~~~D~~~~v~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~~gV~ 79 (323)
T 2f02_A 2 SLIVTVTMNPSIDISYLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKKANIP 79 (323)
T ss_dssp CCEEEEESSCEEEEEEECSC-CCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCC
T ss_pred ceEEEEecCceeEEEEecCC-cccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHHCCCc
Confidence 47899999999999998876 332 13457788999999999999999999999999997 5999999999999999
Q ss_pred CCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHHHH
Q 016868 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHIAA 209 (381)
Q Consensus 136 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (381)
++++...++ |++++++++++ ++++... .++ .+++++++. +.++++++++++++... ..+.+.+.++
T Consensus 80 ~~~v~~~~~--t~~~~~~~~~~-~~~~~~~--~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~ 151 (323)
T 2f02_A 80 QAFTSIKEE--TRDSIAILHEG-NQTEILE--AGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAK-GLPSDFYQEL 151 (323)
T ss_dssp BCCEEESSC--CEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCB-TSCTTHHHHH
T ss_pred eeEEEcCCC--CeeEEEEEcCC-CeEEEEC--CCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCC-CCChHHHHHH
Confidence 999887654 66666667765 6655433 333 256655432 24688999998765432 2344677888
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh---hhCCEEecCHHHHhhccCCCCC-----ChHHHHHHHHhcCC
Q 016868 210 AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW---ETADIIKISEEEISFLTQGEDP-----YDDAVVYKLFHANL 281 (381)
Q Consensus 210 l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l---~~~dvl~~N~~E~~~l~~~~~~-----~~~~~~~~l~~~g~ 281 (381)
++.+++.++++++||+. + .+.+++ +++|++++|++|++.|++.... +..++++.|.+.|+
T Consensus 152 ~~~a~~~g~~v~~Dp~~--------~----~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~g~ 219 (323)
T 2f02_A 152 VQKAHAQEVKVLLDTSG--------D----SLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGI 219 (323)
T ss_dssp HHHHHHTTCEEEEECCT--------H----HHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTC
T ss_pred HHHHHHCCCEEEEECCh--------H----HHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHcCC
Confidence 99999999999999962 1 233455 4899999999999999987632 22345677778899
Q ss_pred CEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcC
Q 016868 282 KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361 (381)
Q Consensus 282 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G 361 (381)
+.|+||+|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|
T Consensus 220 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G 292 (323)
T 2f02_A 220 EWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERM 292 (323)
T ss_dssp SEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSSS
T ss_pred CEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999988888899999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCCCCHHHHHHHHhCC
Q 016868 362 AIPALPTREAVLNAIHAP 379 (381)
Q Consensus 362 ~~~~~~~~~~v~~~l~~~ 379 (381)
+. +|++++++++++++
T Consensus 293 ~~--~~~~~ev~~~~~~~ 308 (323)
T 2f02_A 293 TG--HVDVENVKKHLMNI 308 (323)
T ss_dssp SS--CCCHHHHHHHHTTC
T ss_pred cC--CCCHHHHHHHhhcE
Confidence 84 68999999998765
No 39
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=4e-44 Score=336.93 Aligned_cols=291 Identities=14% Similarity=0.133 Sum_probs=239.2
Q ss_pred CCCcEEEEccceeecccCCCCCCcc----CC---CCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHH
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKE 131 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~----~~---~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~ 131 (381)
..|.|+|+|++++|++..++. +.. .. ..+...+||++.|+|++|++||.++.++|.+|+| +|+++++.|++
T Consensus 11 ~~~~~~v~G~~~vD~~~~~~~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~~ 88 (331)
T 2ajr_A 11 HHMVLTVTLNPALDREIFIED-FQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRK 88 (331)
T ss_dssp -CCEEEEESSCEEEEEEECTT-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHH
T ss_pred cceEEEEecchHHeEEEEcCC-ccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHH
Confidence 458999999999999988877 332 12 5678889999999999999999999999999998 99999999999
Q ss_pred CC--CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhH
Q 016868 132 NN--VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCK 203 (381)
Q Consensus 132 ~g--i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~ 203 (381)
.| |+++++...++ |++++++++++|++.+.+. ..++ .+++++++. +.+.+++++|+++.... ..+.
T Consensus 89 ~g~~V~~~~v~~~~~--t~~~~~~v~~~g~~~~~~~-~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~ 162 (331)
T 2ajr_A 89 ISKLITTNFVYVEGE--TRENIEIIDEKNKTITAIN-FPGP--DVTDMDVNHFLRRYKMTLSKVDCVVISGSIPP-GVNE 162 (331)
T ss_dssp HCTTEEEEEEEESSC--CEEEEEEEETTTTEEEEEE-CCCC--CCCHHHHHHHHHHHHHHHTTCSEEEEESCCCT-TSCT
T ss_pred cCCccceEEEEcCCC--CeEEEEEEeCCCceEEEEe-CCCC--CCCHHHHHHHHHHHHHhcccCCEEEEECCCCC-CCCH
Confidence 99 99998877653 6677777777888833343 2333 256655432 34688999999765322 2345
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh---CCEEecCHHH-HhhccCCCCCCh---HHHHHHH
Q 016868 204 SAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET---ADIIKISEEE-ISFLTQGEDPYD---DAVVYKL 276 (381)
Q Consensus 204 ~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~---~dvl~~N~~E-~~~l~~~~~~~~---~~~~~~l 276 (381)
+.+.++++.+++.|+++++||+. + .+.+++++ +|++++|++| ++.|++....+. .++++.|
T Consensus 163 ~~~~~~~~~a~~~g~~v~~D~~~--------~----~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l 230 (331)
T 2ajr_A 163 GICNELVRLARERGVFVFVEQTP--------R----LLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKL 230 (331)
T ss_dssp THHHHHHHHHHHTTCEEEEECCH--------H----HHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCh--------H----HHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHH
Confidence 67788899999999999999961 2 24455554 9999999999 999998764433 3466778
Q ss_pred HhcCCCEEEEEecCCceEEEeCCceEEEc-cccccccCCCCccHHHHHHHHHHHH-cCCccccchHHHHHHHHHHHHHHH
Q 016868 277 FHANLKLLLVTEGPDGCRYYTKDFSGRVQ-GLKVEAVDATGAGDAFVAGILSQLS-TDFSLLQKEDQLRDALRFANACGA 354 (381)
Q Consensus 277 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~-~~~v~vvdttGAGDaF~ag~l~~l~-~g~~~~~~~~~l~~al~~A~~~Aa 354 (381)
.+. ++.|+||+|++|++++++++.+++| +++++++|||||||+|+|||+++|+ +|++ +++|+++|+++|+
T Consensus 231 ~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~-------~~~al~~A~a~aa 302 (331)
T 2ajr_A 231 AEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN-------FLEMAKFGFASAL 302 (331)
T ss_dssp HHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-------HHHHHHHHHHHHH
T ss_pred HHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 778 9999999999999999888888899 9999999999999999999999999 9999 9999999999999
Q ss_pred HHhhhcCCCCCCCCHHHHHHHHhCC
Q 016868 355 LTVMERGAIPALPTREAVLNAIHAP 379 (381)
Q Consensus 355 ~~~~~~G~~~~~~~~~~v~~~l~~~ 379 (381)
+++++.|+. +|++++++++++++
T Consensus 303 ~~v~~~G~~--~~~~~ev~~~~~~~ 325 (331)
T 2ajr_A 303 AATRRKEKY--MPDLEAIKKEYDHF 325 (331)
T ss_dssp HHTTSSSCC--CCCHHHHHTTGGGE
T ss_pred HHHcCcCcC--CCCHHHHHHHHhhc
Confidence 999999984 69999999988764
No 40
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=2.5e-44 Score=343.46 Aligned_cols=298 Identities=18% Similarity=0.231 Sum_probs=239.4
Q ss_pred cEEEEccceeecccCCCCC-------Ccc-----------------CCCCccccCCChHHHHHHHHHHcCCc---eEEEe
Q 016868 62 LVVCFGEMLIDFVPTVSGL-------SLA-----------------ESPAFKKAPGGAPANVAVGIARLGGS---SAFIG 114 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~-------~~~-----------------~~~~~~~~~GG~~~NvA~~la~LG~~---v~li~ 114 (381)
.|++||+.++|++..++.. +.. +....+..+||++.|+|+++++||.+ +.|+|
T Consensus 28 ~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fiG 107 (372)
T 3uq6_A 28 YVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVG 107 (372)
T ss_dssp CEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEEE
T ss_pred eEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEEe
Confidence 6999999999999877632 110 12345668999999999999999965 99999
Q ss_pred ecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcCCccEE
Q 016868 115 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKAKIF 190 (381)
Q Consensus 115 ~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~~~~~~ 190 (381)
+||+|.+|+++++.|++.||+++++...++.+|+.++++++ +|+|++..+ .++...+++++++. +.+++++++
T Consensus 108 ~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~--~ga~~~l~~~~i~~~~~~~~i~~a~~~ 184 (372)
T 3uq6_A 108 CIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKAQVY 184 (372)
T ss_dssp EECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred eecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe--ccchhhcchhhhhhhhHHHHhhcccEE
Confidence 99999999999999999999999998888889999988875 899998887 45666688877763 467889999
Q ss_pred EEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCC---C
Q 016868 191 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED---P 267 (381)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~---~ 267 (381)
+++++.+ +...+...++++.+++.++++++|++.+.. .+..++.+.++++++|++++|++|++.|++... .
T Consensus 185 ~~~g~~~--~~~~~~~~~~~~~a~~~g~~v~ldls~~~~----~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~ 258 (372)
T 3uq6_A 185 YIAGFVI--NTCYEGMLKIAKHSLENEKLFCFNLSAPFL----SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLED 258 (372)
T ss_dssp EEEGGGH--HHHHHHHHHHHHHHHHTTCEEEEECCCHHH----HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSS
T ss_pred EEecccc--cccHHHHHHHHHHHHHcCCeEeeccccchh----hhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchh
Confidence 9998753 345678889999999999999999863211 233467788899999999999999999987543 2
Q ss_pred ChHHHHHHHHh-------cCCCEEEEEecCCceEEEeCCc--eEEE--cccc-ccccCCCCccHHHHHHHHHHHHcCCcc
Q 016868 268 YDDAVVYKLFH-------ANLKLLLVTEGPDGCRYYTKDF--SGRV--QGLK-VEAVDATGAGDAFVAGILSQLSTDFSL 335 (381)
Q Consensus 268 ~~~~~~~~l~~-------~g~~~vvvt~G~~G~~~~~~~~--~~~~--~~~~-v~vvdttGAGDaF~ag~l~~l~~g~~~ 335 (381)
+.+++++.+.+ .+.+.||||+|++|+++++.++ ...+ ++.+ .++||||||||+|+|||+++|++|++
T Consensus 259 ~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~- 337 (372)
T 3uq6_A 259 TVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP- 337 (372)
T ss_dssp HHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-
T ss_pred HHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCC-
Confidence 33455566554 4677899999999999998663 2333 3333 47999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 336 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 336 ~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+++|+++|+++|+.+|++.|+. +|++++++-.++
T Consensus 338 ------l~~a~~~a~~aAa~vv~~~Ga~--lp~r~~~~lkln 371 (372)
T 3uq6_A 338 ------MITSLHAAVKAAAYIICRSGFS--LGSRDSYSLKIN 371 (372)
T ss_dssp ------HHHHHHHHHHHHHHHHTSSSSC--CCCGGGCC----
T ss_pred ------HHHHHHHHHHHHHHHHcCCCCC--CCChhHHHHHhc
Confidence 9999999999999999999974 688887765444
No 41
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=1.8e-44 Score=341.60 Aligned_cols=287 Identities=21% Similarity=0.275 Sum_probs=230.1
Q ss_pred CCCCcEEEEccceeecccC--CCCC----Ccc--CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHH
Q 016868 58 RESPLVVCFGEMLIDFVPT--VSGL----SLA--ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADIL 129 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~--~~~~----~~~--~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l 129 (381)
..+++|+|+|++++|++.. ++.. |.+ ....+...+||+ .|+|++|++||.++.++|.+|+|.+|+++++.|
T Consensus 51 ~~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~L 129 (352)
T 4e84_A 51 LARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVELL 129 (352)
T ss_dssp HTTCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHH
T ss_pred cCCCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHHH
Confidence 3457999999999999865 2222 221 234577899998 899999999999999999999999999999999
Q ss_pred HHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHH
Q 016868 130 KENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHI 207 (381)
Q Consensus 130 ~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~ 207 (381)
++.||++ .+...++.+|++++++++.++++..+.+ ....+.....+.++ .+.++++++++++++... +.+.+.
T Consensus 130 ~~~GV~~-~~~~~~~~~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~---~~~~~~ 204 (352)
T 4e84_A 130 GSSGVTP-HLERDPALPTTIKLRVLARQQQLLRVDF-EAMPTHEVLLAGLARFDVLLPQHDVVLMSDYAKG---GLTHVT 204 (352)
T ss_dssp TTTSCEE-EEEEETTSCCCEEEEEEESSCEEEEEEE-CCCCCHHHHHHHHHHHHHHGGGCSEEEEECCSSS---SCSSHH
T ss_pred HHcCCce-eeEECCCCCCceEEEEEcCCceEEEEEc-CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCC---CHHHHH
Confidence 9999999 4666677899999999887666543332 12222112221111 356889999999976421 122367
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHh-cCCCE
Q 016868 208 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFH-ANLKL 283 (381)
Q Consensus 208 ~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~-~g~~~ 283 (381)
++++.+++.|+++++||+.. .| ++++.+|++++|++|++.|++ ...+. .++++.|++ .|++.
T Consensus 205 ~~~~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~~~~g~~~ 270 (352)
T 4e84_A 205 TMIEKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLRAELDIDA 270 (352)
T ss_dssp HHHHHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHhCCCE
Confidence 88899999999999999753 22 357899999999999999999 33222 345567764 79999
Q ss_pred EEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 284 LLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 284 vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 271 VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~-------l~~al~~A~aaaa~~v~~~Ga~ 343 (352)
T 4e84_A 271 LLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVP-------LVDAVVLANRAAGIVVGKLGTA 343 (352)
T ss_dssp EEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSC
T ss_pred EEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999997
Q ss_pred CCCCCHHHHH
Q 016868 364 PALPTREAVL 373 (381)
Q Consensus 364 ~~~~~~~~v~ 373 (381)
+ ++++||+
T Consensus 344 ~--~t~~el~ 351 (352)
T 4e84_A 344 T--VDYDELF 351 (352)
T ss_dssp C--CCHHHHT
T ss_pred c--CCHHHhc
Confidence 5 6999885
No 42
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=6.4e-44 Score=337.50 Aligned_cols=287 Identities=20% Similarity=0.290 Sum_probs=239.3
Q ss_pred CCcEEEEccceeecccCCCC-------CCcc-----------------CCCCccccCCChHHHHHHHHHHcC----CceE
Q 016868 60 SPLVVCFGEMLIDFVPTVSG-------LSLA-----------------ESPAFKKAPGGAPANVAVGIARLG----GSSA 111 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~-------~~~~-----------------~~~~~~~~~GG~~~NvA~~la~LG----~~v~ 111 (381)
.++|+|+|++++|++..++. .... +...+...+||++.|+|++|++|| .++.
T Consensus 6 ~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~ 85 (345)
T 1bx4_A 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 85 (345)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred cccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEE
Confidence 36899999999999988765 1111 124667889999999999999996 9999
Q ss_pred EEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChh-ccc----hhhcCC
Q 016868 112 FIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA-ELD----LSLITK 186 (381)
Q Consensus 112 li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~l~----~~~i~~ 186 (381)
++|.+|+|.+|+++++.|+++||+++++. .++.+|++++++++ +|+|+++.+ .+++..++++ +++ .+.+++
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~ 161 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYE-QNEQPTGTCAACIT-GDNRSLIAN--LAAANCYKKEKHLDLEKNWMLVEK 161 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEE-ESSSCCCEEEEEEE-TTEEEEEEE--CGGGGGCCGGGTTTSHHHHHHHHH
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeee-cCCCCCceEEEEEc-CCceEeeec--cchHhhcCcccccCcHHHHHHHhh
Confidence 99999999999999999999999999886 45668999999887 788877654 4555567776 665 345778
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC-
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE- 265 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~- 265 (381)
++++|++++.+. .+.+.+.++++.+++.++++++|+.. +.| .+..++.+.++++++|++++|++|++.|++..
T Consensus 162 ~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~--~~~--~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~ 235 (345)
T 1bx4_A 162 ARVCYIAGFFLT--VSPESVLKVAHHASENNRIFTLNLSA--PFI--SQFYKESLMKVMPYVDILFGNETEAATFAREQG 235 (345)
T ss_dssp CSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCS--HHH--HHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTT
T ss_pred CCEEEEEEEecc--CCHHHHHHHHHHHHHcCCEEEEeCCc--HHH--HHHHHHHHHHHhccCCEEeCCHHHHHHHhcccC
Confidence 999999887542 35578889999999999999999852 112 12334567789999999999999999998643
Q ss_pred --CCChHHHHHHHHh------cCCCEEEEEecCCceEEEeCCceEEEccccc---cccCCCCccHHHHHHHHHHHHcCCc
Q 016868 266 --DPYDDAVVYKLFH------ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFS 334 (381)
Q Consensus 266 --~~~~~~~~~~l~~------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g~~ 334 (381)
..+.+++++.|.+ .|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|++
T Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~ 315 (345)
T 1bx4_A 236 FETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKP 315 (345)
T ss_dssp CCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCC
Confidence 3345677788887 5999999999999999998888889999887 8999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 335 LLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 335 ~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
+++|+++|+++|+.++++.|+.
T Consensus 316 -------~~~a~~~A~~~aa~~v~~~G~~ 337 (345)
T 1bx4_A 316 -------LTECIRAGHYAASIIIRRTGCT 337 (345)
T ss_dssp -------HHHHHHHHHHHHHHHTTSSSSC
T ss_pred -------HHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999986
No 43
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=1.3e-44 Score=336.40 Aligned_cols=277 Identities=13% Similarity=0.207 Sum_probs=230.2
Q ss_pred CCCcEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~ 135 (381)
++++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+| +|+++++.|++.||+
T Consensus 19 ~~~~v~viG~~~iD~~~~~~~~p~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~ 97 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGIN 97 (306)
T ss_dssp CCEEEEEECCCEEEEEEECSCCCSSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTCC
T ss_pred CCCcEEEECCceEEEEEecCCCCCCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCCC
Confidence 3468999999999999887766622 233467889999999999999999999999999999 999999999999999
Q ss_pred CCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH
Q 016868 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 136 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 215 (381)
++++...++.+|+++++++++ |++++..+. +++..++ +++. ++++++|+++.. ...++++.+++
T Consensus 98 ~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~--ga~~~~~-~~l~----~~~~~v~~~~~~--------~~~~~~~~a~~ 161 (306)
T 3bf5_A 98 TGHVEKFEDESGPICYIATDG-KKQVSFMHQ--GAMAAWA-PQLA----DEYEYVHFSTGP--------NYLDMAKSIRS 161 (306)
T ss_dssp CTTEEEETTCCCSEEEEEECS-SCEEEEEEC--THHHHCC-CCCC----SCEEEEEECSSS--------SHHHHHHHCCS
T ss_pred chheEecCCCCCceEEEEEcC-CeeEEEEeC--Chhhhhh-Hhhc----CCCCEEEECChH--------HHHHHHHHhCC
Confidence 999987777789999999988 999887763 3444455 4442 678999998753 34566776664
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
++++||+.+. |.. ..+.+.++++++|++++|++|++.|++....+.. .+ .||||+|++|+++
T Consensus 162 ---~v~~D~~~~~--~~~---~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l------~vvvT~G~~Ga~~ 223 (306)
T 3bf5_A 162 ---KIIFDPSQEI--HKY---SKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP----KV------TTIVTNGERGSSL 223 (306)
T ss_dssp ---EEEECCGGGG--GGS---CHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC----SS------CEEEEEGGGEEEE
T ss_pred ---cEEEcCchhh--hhc---cHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc----cE------EEEEeecccCeEE
Confidence 9999998432 211 1455677889999999999999999875433221 11 1999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhh--cCCCCCCCCHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME--RGAIPALPTREAVL 373 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~--~G~~~~~~~~~~v~ 373 (381)
+++++.+++|+++++ +||+||||+|+|||+++|++|++ +++|+++|+++|++++++ .|+.+.+|++++++
T Consensus 224 ~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~~~G~~~~~p~~~ev~ 295 (306)
T 3bf5_A 224 FMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHHVIDDGIENFSLNMEDLERET 295 (306)
T ss_dssp EETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHCSTTCCCCHHHHHHHH
T ss_pred EeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCccccccCCCHHHHH
Confidence 998888899999999 99999999999999999999999 999999999999999999 99987789999999
Q ss_pred HHHhC
Q 016868 374 NAIHA 378 (381)
Q Consensus 374 ~~l~~ 378 (381)
+++++
T Consensus 296 ~~~~~ 300 (306)
T 3bf5_A 296 ENYRR 300 (306)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98864
No 44
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=2.3e-43 Score=328.72 Aligned_cols=288 Identities=22% Similarity=0.239 Sum_probs=230.2
Q ss_pred cEEEE-ccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCF-GEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlvi-G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+++ |++++|++..++..... ....+...+||++.|+|.+|++||.++.++|.+|+| +|+++++.|+++||+++
T Consensus 3 ~I~~v~g~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~ 81 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVA 81 (309)
T ss_dssp CEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEE
T ss_pred eEEEEeccchheEEEEcCCCcCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCCce
Confidence 57744 69999999887763222 234577889999999999999999999999999998 99999999999999999
Q ss_pred CeeecCCCCceEEEEE-ecCCCCceEEEecCCCccccCChhccc------hhhcCCccEEEEccccccCchhHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVT-LRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYGSISLITEPCKSAHIAAA 210 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 210 (381)
++...++ |++++++ ++++|+++++.. ++. .+++++++ .+.+++ +++|++++.. ...+.+.+.+++
T Consensus 82 ~v~~~~~--t~~~~~~~~~~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~-~~~~~~~~~~~~ 153 (309)
T 3cqd_A 82 TVEAKDW--TRQNLHVHVEASGEQYRFVM--PGA--ALNEDEFRQLEEQVLEIESG-AILVISGSLP-PGVKLEKLTQLI 153 (309)
T ss_dssp EEECSSC--CCCCEEEEETTTCCEEEEEC--CCC--CCCHHHHHHHHHHHHTSCTT-CEEEEESCCC-TTCCHHHHHHHH
T ss_pred eEEcCCC--CeeEEEEEEcCCCCEEEEEc--CCC--CCCHHHHHHHHHHHHHhhcC-CEEEEECCCC-CCCCHHHHHHHH
Confidence 9877654 4444455 678888765543 333 25555443 134677 9999987643 234567888899
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHH-hhhC-CEEecCHHHHhhccCCCCC---ChHHHHHHHHhcC-CCEE
Q 016868 211 KAAKDAGVVLSYDPNLRLPLWPSADKAREGILSI-WETA-DIIKISEEEISFLTQGEDP---YDDAVVYKLFHAN-LKLL 284 (381)
Q Consensus 211 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~-l~~~-dvl~~N~~E~~~l~~~~~~---~~~~~~~~l~~~g-~~~v 284 (381)
+.+++.++++++||+. .. +.+. .+.+ |++++|++|++.|++.... +..++++.+.+.| ++.|
T Consensus 154 ~~a~~~g~~v~~D~~~--------~~----~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~v 221 (309)
T 3cqd_A 154 SAAQKQGIRCIVDSSG--------EA----LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRV 221 (309)
T ss_dssp HHHHTTTCEEEEECCH--------HH----HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCE
T ss_pred HHHHHcCCeEEEECCh--------HH----HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999962 11 2333 3778 9999999999999987543 2345678888899 9999
Q ss_pred EEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 285 LVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 285 vvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
+||+|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.
T Consensus 222 vvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~~~~~G~~- 293 (309)
T 3cqd_A 222 VVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR- 293 (309)
T ss_dssp EEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTC------
T ss_pred EEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCC-
Confidence 99999999999988888899999999999999999999999999999999 9999999999999999999985
Q ss_pred CCCCHHHHHHHHhCC
Q 016868 365 ALPTREAVLNAIHAP 379 (381)
Q Consensus 365 ~~~~~~~v~~~l~~~ 379 (381)
.|++++++++++++
T Consensus 294 -~~~~~~v~~~~~~~ 307 (309)
T 3cqd_A 294 -LCSHDDTQKIYAYL 307 (309)
T ss_dssp -CCCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHh
Confidence 58999999998865
No 45
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.1e-43 Score=331.32 Aligned_cols=292 Identities=17% Similarity=0.227 Sum_probs=232.1
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCC-ceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGG-SSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~-~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
|+|+|+|+|++++|++.... ......+||++.|+|++|++||. ++.++|.+|+| +|+++++.|+++||+++
T Consensus 1 M~~~ilviG~~~iD~~~~~~-------~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~ 72 (313)
T 3kd6_A 1 MSLSLLVIGSLAFDDIETPF-------GRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNIDTR 72 (313)
T ss_dssp --CCEEEESCCEEEEEECSS-------CEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTEEEE
T ss_pred CCccEEEEeEEEEeeecCCC-------CcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCCCcc
Confidence 34689999999999996532 23567899999999999999999 99999999999 99999999999999999
Q ss_pred CeeecCCCCceEEEE--EecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFV--TLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 215 (381)
++.+.++.+|....- ..+.++++++... .+....+.++ + .+.+++++++|++++. .+...++++.+ +
T Consensus 73 ~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~v~~~~~~------~~~~~~~~~~~-~ 141 (313)
T 3kd6_A 73 GIQVIEDGKTFRWAGRYHYDMNTRDTLDTQ--LNVFAEFDPH-V-PQYYRDSKFVCLGNID------PELQLKVLDQI-D 141 (313)
T ss_dssp EEEEETTCCCEEEEEEECTTSSCEEEEEEE--CGGGTTCCCC-C-CGGGTTCSEEEECSSC------HHHHHHHHTTC-S
T ss_pred ceEEcCCCCeeeeeeeeeccccccceeecc--cchHhhcCcc-c-hHHHccCCEEEEcCCC------HHHHHHHHHHH-h
Confidence 998887767743211 1233445554432 2333334332 2 3567899999997642 24455666666 5
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
.+.++++||. .+|. +...+.+.++++++|++++|++|++.|++.. +.+++++.|.+.|++.|+||+|++|+++
T Consensus 142 ~~~~v~~Dp~---~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 214 (313)
T 3kd6_A 142 DPKLVVCDTM---NFWI--EGKPEELKKVLARVDVFIVNDSEARLLSGDP--NLVKTARIIREMGPKTLIIKKGEHGALL 214 (313)
T ss_dssp SCSEEEEECC---HHHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCS--CHHHHHHHHHTTSCSEEEEECTTSCEEE
T ss_pred hCCEEEEcCh---hhhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCC--CHHHHHHHHHHcCCCEEEEeeCCCcEEE
Confidence 7889999983 2232 2345677789999999999999999999865 3467888999999999999999999999
Q ss_pred EeCCceEEEccccc-cccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCC-CCCHHHHH
Q 016868 296 YTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA-LPTREAVL 373 (381)
Q Consensus 296 ~~~~~~~~~~~~~v-~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~-~~~~~~v~ 373 (381)
+++++.+++|++++ +++||+||||+|+|||+++|++|.+ .+..++++|+++|+++|++++++.|+.+. .|+++||+
T Consensus 215 ~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~--~~~~~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev~ 292 (313)
T 3kd6_A 215 FTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGN--TSEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEVD 292 (313)
T ss_dssp EETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHHH
T ss_pred EECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCC--ccccCHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHHH
Confidence 99998899999998 7999999999999999999999871 01223999999999999999999999753 58999999
Q ss_pred HHHhC
Q 016868 374 NAIHA 378 (381)
Q Consensus 374 ~~l~~ 378 (381)
+++++
T Consensus 293 ~~l~~ 297 (313)
T 3kd6_A 293 DRYQS 297 (313)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
No 46
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=9.9e-43 Score=324.77 Aligned_cols=277 Identities=18% Similarity=0.276 Sum_probs=226.9
Q ss_pred CCCcEEEEccceeecccCCCCCCccC----CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
.+++|+|+|++++|++..++..|... .......+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+++||
T Consensus 16 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~GV 95 (312)
T 2hlz_A 16 RGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYSV 95 (312)
T ss_dssp -CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHTTC
T ss_pred CCCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHcCC
Confidence 34689999999999998777655432 23456789999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEec-CCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLR-SDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
+++++...++.+|++++++++ .+|+|++++++ ++...+++++++...+++++++|++++. .+...++++.+
T Consensus 96 ~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~--~~~~~~~~~~~~~~~l~~~~~v~~~~~~------~~~~~~~~~~a 167 (312)
T 2hlz_A 96 DLRYTVFQTTGSVPIATVIINEASGSRTILYYD--RSLPDVSATDFEKVDLTQFKWIHIEGRN------ASEQVKMLQRI 167 (312)
T ss_dssp BCTTEEECSSCCCCEEEEEEETTTCCEEEEEEC--CCCCCCCHHHHHTSCGGGEEEEEEECSS------HHHHHHHHHHH
T ss_pred CCccceeccCCCCCeEEEEEECCCCceEEEecC--CccccCCHHHhhHhhhccCCEEEEeccC------HHHHHHHHHHH
Confidence 999998876667787777665 57999988764 3445677777765567889999998762 24556667777
Q ss_pred HHC--------CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCC--CE
Q 016868 214 KDA--------GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL--KL 283 (381)
Q Consensus 214 ~~~--------g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~--~~ 283 (381)
++. ++++++|+... ++.+.++++++|++++|++|++.+ +. .+.+++++.+.+.+. +.
T Consensus 168 ~~~~~~~~~~~~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l-g~--~~~~~~~~~l~~~~~~g~~ 234 (312)
T 2hlz_A 168 DAHNTRQPPEQKIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL-GF--QSAEEALRGLYGRVRKGAV 234 (312)
T ss_dssp HHHHTTSCGGGCCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT-TC--CSHHHHHHHHGGGSCTTCE
T ss_pred HHhcccccCCCCeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc-CC--CCHHHHHHHHHHhcCCCCE
Confidence 765 68899998532 124557889999999999999987 54 344667777776543 89
Q ss_pred EEEEecCCceEEEeC-CceEEEccc-cccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcC
Q 016868 284 LLVTEGPDGCRYYTK-DFSGRVQGL-KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361 (381)
Q Consensus 284 vvvt~G~~G~~~~~~-~~~~~~~~~-~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G 361 (381)
||||+|++|+++++. ++.+++|++ +++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|
T Consensus 235 vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G 307 (312)
T 2hlz_A 235 LVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQEALRFGCQVAGKKCGLQG 307 (312)
T ss_dssp EEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSS
T ss_pred EEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhhcC
Confidence 999999999999875 456788985 468999999999999999999999999 99999999999999999999
Q ss_pred CC
Q 016868 362 AI 363 (381)
Q Consensus 362 ~~ 363 (381)
+.
T Consensus 308 ~~ 309 (312)
T 2hlz_A 308 FD 309 (312)
T ss_dssp SG
T ss_pred cc
Confidence 64
No 47
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=2.3e-43 Score=338.25 Aligned_cols=287 Identities=22% Similarity=0.286 Sum_probs=234.2
Q ss_pred CCcEEEEccceeecccCCCC-C-----Ccc-----------------CCCCccccCCChHHHHHHHHHHc---CCceEEE
Q 016868 60 SPLVVCFGEMLIDFVPTVSG-L-----SLA-----------------ESPAFKKAPGGAPANVAVGIARL---GGSSAFI 113 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~-~-----~~~-----------------~~~~~~~~~GG~~~NvA~~la~L---G~~v~li 113 (381)
+++|+|+|++++|++..++. . +.. +...+...+||++.|+|++|++| |.++.++
T Consensus 32 ~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~~i 111 (383)
T 2abs_A 32 PMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYM 111 (383)
T ss_dssp CCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEEE
T ss_pred CceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEEEE
Confidence 46899999999999987654 1 111 12356778999999999999999 8999999
Q ss_pred eecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEc
Q 016868 114 GKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYG 193 (381)
Q Consensus 114 ~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ 193 (381)
|.||+|.+|+++++.|++.||+++++. .++.+|++++++++ +|+++++.+ .+++..+++++...+.+++++++|++
T Consensus 112 g~vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~l~~~~~~~~~l~~~~~v~~~ 187 (383)
T 2abs_A 112 GAIGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH--LGACGSFRLPEDWTTFASGALIFYAT 187 (383)
T ss_dssp EEECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE--CGGGGGCCCCTTHHHHTTTCCEEEEE
T ss_pred EEecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec--cChhhhCChhhhhHHHhhcCCEEEEe
Confidence 999999999999999999999999886 45679999999987 788877654 45555566554334668899999999
Q ss_pred cccccCchhHHHHHHHHHHHHH-CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCC------
Q 016868 194 SISLITEPCKSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED------ 266 (381)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~------ 266 (381)
++.+. .+.+.+.++++.+++ .++++++|+.. ++| .+..++.+.++++++|++++|++|++.|++...
T Consensus 188 g~~~~--~~~~~~~~~~~~a~~~~g~~v~~d~~~--~~~--~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~ 261 (383)
T 2abs_A 188 AYTLT--ATPKNALEVAGYAHGIPNAIFTLNLSA--PFC--VELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEK 261 (383)
T ss_dssp GGGGT--TCHHHHHHHHHHHHTSTTCEEEEECCC--HHH--HHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC----
T ss_pred eeccc--CCHHHHHHHHHHHHHhcCCEEEEeCCc--HHH--HHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccc
Confidence 87542 345788899999998 89999999852 122 123346677899999999999999999976431
Q ss_pred ---------CChHHHHHHHHh------c-CCCEEEEEecCCceEEE-----eCCceEEEccccc---cccCCCCccHHHH
Q 016868 267 ---------PYDDAVVYKLFH------A-NLKLLLVTEGPDGCRYY-----TKDFSGRVQGLKV---EAVDATGAGDAFV 322 (381)
Q Consensus 267 ---------~~~~~~~~~l~~------~-g~~~vvvt~G~~G~~~~-----~~~~~~~~~~~~v---~vvdttGAGDaF~ 322 (381)
.+.+++++.|.+ . |++.||||+|++|++++ .+++.+++|++++ +++||+||||+|+
T Consensus 262 ~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ 341 (383)
T 2abs_A 262 TALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFV 341 (383)
T ss_dssp ------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHH
T ss_pred cccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHH
Confidence 112355667766 3 89999999999999998 5556778898877 8999999999999
Q ss_pred HHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 323 AGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 323 ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
|||+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 342 ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 342 GGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp HHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999 9999999999999999999986
No 48
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=2.1e-42 Score=321.79 Aligned_cols=285 Identities=21% Similarity=0.252 Sum_probs=235.0
Q ss_pred cEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
=+.|.|++++|++..++..... ....+...+||++.|+|++|++||.++.++|.+|+ .+|+++++.|++.||++++
T Consensus 2 i~tv~~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~~~~ 80 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEIGLSF 80 (306)
T ss_dssp EEEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTCEECC
T ss_pred EEEEecCchheEEEEcCCcccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCCceEE
Confidence 4678899999999888775322 23457788999999999999999999999999998 7999999999999999999
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hh---cCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SL---ITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~---i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
+...++ |++++++ .+|++++... .+. .+++++++. +. +++++++|++++... ..+.+.+.++++.+
T Consensus 81 v~~~~~--t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~a 151 (306)
T 2abq_A 81 IEVEGD--TRINVKI--KGKQETELNG--TAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQ-AMPQTIYRSMTQIA 151 (306)
T ss_dssp EEESSC--CEEEEEE--ESSSCEEEBC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCT-TSCTTHHHHHHHHH
T ss_pred EEcCCC--CceEEEE--eCCceEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCC-CCCHHHHHHHHHHH
Confidence 987643 6666655 4788765433 333 356655432 11 578999998775432 33456778889999
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEec
Q 016868 214 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEG 289 (381)
Q Consensus 214 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G 289 (381)
++.|+++++||+ . +.+.++++ ++|++++|++|++.|++....+. .++++.+.+.|++.|+||+|
T Consensus 152 ~~~g~~v~~D~~--------~----~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 219 (306)
T 2abq_A 152 KERGAFVAVDTS--------G----EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFA 219 (306)
T ss_dssp HTTTCEEEEECC--------H----HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred HhcCCEEEEECC--------h----HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 999999999995 1 23567888 99999999999999998754433 34567888899999999999
Q ss_pred CCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCH
Q 016868 290 PDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 369 (381)
Q Consensus 290 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~ 369 (381)
++|++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++. ++|++
T Consensus 220 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~----~~p~~ 288 (306)
T 2abq_A 220 GDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGSATAFSD----GFCTR 288 (306)
T ss_dssp GGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSS----SCCCH
T ss_pred CCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCc----CCCCH
Confidence 999999988888899999999999999999999999999999999 9999999999999999998 46899
Q ss_pred HHHHHHHhCC
Q 016868 370 EAVLNAIHAP 379 (381)
Q Consensus 370 ~~v~~~l~~~ 379 (381)
++++++++++
T Consensus 289 ~ev~~~~~~~ 298 (306)
T 2abq_A 289 EEVERLQQQL 298 (306)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhE
Confidence 9999988753
No 49
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=5.3e-42 Score=319.04 Aligned_cols=286 Identities=21% Similarity=0.253 Sum_probs=233.7
Q ss_pred CcEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
|-+.|.|++++|++..++..... ....+...+||++.|+|++|++||.++.++|.+|+ .+|+++++.|++.||+++
T Consensus 1 mi~tvt~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~~~ 79 (306)
T 2jg5_A 1 MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAIQSN 79 (306)
T ss_dssp CEEEEESSCEEEEEEECSSCCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEecCceEEEEEEcCCcccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCCcee
Confidence 35778899999999888764222 23457788999999999999999999999999999 699999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--h-h--cCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--S-L--ITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~-~--i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
++...++ |++++.+ .+|+++++.. .+. .+++++++. + . +++++++|+++.... ..+.+.+.++++.
T Consensus 80 ~v~~~~~--t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~ 150 (306)
T 2jg5_A 80 FIEVDED--TRINVKL--KTGQETEINA--PGP--HITSTQFEQLLQQIKNTTSEDIVIVAGSVPS-SIPSDAYAQIAQI 150 (306)
T ss_dssp CEECSSC--CEEEEEE--ESSSEEEEEC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCT-TSCTTHHHHHHHH
T ss_pred EEEcCCC--CeEEEEE--cCCCEEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEeCCCCC-CCChHHHHHHHHH
Confidence 9887543 6666555 4677755443 333 255555432 1 1 578999998765432 2334677788899
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEe
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTE 288 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~ 288 (381)
+++.++++++||+ . ..+.++++ .+|++++|++|++.|++....+. .++++.+.+.|++.|+||+
T Consensus 151 a~~~g~~v~~D~~--------~----~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 218 (306)
T 2jg5_A 151 TAQTGAKLVVDAE--------K----ELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSL 218 (306)
T ss_dssp HHHHCCEEEEECC--------H----HHHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEEEEC
T ss_pred HHHCCCEEEEECC--------h----HHHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEcc
Confidence 9999999999995 1 13455677 69999999999999998765433 3466778889999999999
Q ss_pred cCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 016868 289 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368 (381)
Q Consensus 289 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~ 368 (381)
|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.| +|+
T Consensus 219 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G----~~~ 287 (306)
T 2jg5_A 219 GGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLS-------IEKAFQQAVACGTATAFDED----LAT 287 (306)
T ss_dssp GGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSS----SCC
T ss_pred CCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCC----CCC
Confidence 9999999988888899999999999999999999999999999999 99999999999999999999 589
Q ss_pred HHHHHHHHhCC
Q 016868 369 REAVLNAIHAP 379 (381)
Q Consensus 369 ~~~v~~~l~~~ 379 (381)
+++++++++++
T Consensus 288 ~~ev~~~~~~~ 298 (306)
T 2jg5_A 288 RDAIEKIKSQV 298 (306)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhce
Confidence 99999998775
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.8e-39 Score=300.69 Aligned_cols=278 Identities=18% Similarity=0.122 Sum_probs=216.4
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
-.|.++|.+..|.+.+.. .+...+||++.|+|++|++||.++.++|.+|+|. +.+++.|++.||+++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~--------~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~ 81 (298)
T 1vk4_A 12 HMITFIGHVSKDVNVVDG--------KREIAYGGGVVMGAITSSLLGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLK 81 (298)
T ss_dssp SEEEEECCCEEEEEEETT--------EEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEE
T ss_pred eeEEEeccccCceEeecC--------eEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEe
Confidence 358999999999887643 3567899999999999999999999999999996 788999999999999775
Q ss_pred ecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeE
Q 016868 141 FDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVL 220 (381)
Q Consensus 141 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v 220 (381)
. +.+|++..++ +.+|++++..+. ++...++++++.. .+++++|++++.. .+.. .++++.+++.++++
T Consensus 82 ~--~~~t~~~~i~-~~~g~~~~~~~~--~~~~~l~~~~~~~---~~~~~v~~~~~~~-~~~~----~~~~~~~~~~g~~v 148 (298)
T 1vk4_A 82 S--PRTTSIENRY-GSDPDTRESFLI--SAADPFTESDLAF---IEGEAVHINPLWY-GEFP----EDLIPVLRRKVMFL 148 (298)
T ss_dssp C--SSCEEEEEEC------CCEEEEE--ECCCCCCGGGGGG---CCSSEEEECCSST-TSSC----GGGHHHHHHHCSEE
T ss_pred c--CCCcEEEEEE-cCCCCeeEEEec--cccccCCHHHcCc---CCCCEEEECCccc-cccc----HHHHHHHHHcCCEE
Confidence 4 3456665554 556887776553 3445567666543 6789999988643 2222 35567777889999
Q ss_pred EEeCCC-CCCCCCCH--HHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 221 SYDPNL-RLPLWPSA--DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 221 ~~D~~~-~~~~~~~~--~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
++||+. ...+|... ...++.+.++++++|++++|++|++.|++.. +.+++++.|.+.|++.||||+ ++|+++++
T Consensus 149 ~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvT~-~~G~~~~~ 225 (298)
T 1vk4_A 149 SADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTN--DLRESCRIIRSFGAKIILATH-ASGVIVFD 225 (298)
T ss_dssp EEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSCS--CHHHHHHHHHHTTCSSEEEEE-TTEEEEES
T ss_pred EEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCCC--CHHHHHHHHHhcCCCEEEEEc-CCCcEEEe
Confidence 999962 11001000 0001235678899999999999999999875 346778888899999999999 99999988
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHc-CCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST-DFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~-g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
+ +.+++|+++++++|||||||+|+|||+++|++ |++ +++|+++|+++|++++++.|+.+. |+++|+.
T Consensus 226 ~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~-~~~~el~ 293 (298)
T 1vk4_A 226 G-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKMRHPGPLRR-EDLEAIS 293 (298)
T ss_dssp S-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHTTSSSSCCG-GGGGGCC
T ss_pred C-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCCCC-CCHHHHh
Confidence 7 77889999999999999999999999999999 999 999999999999999999999865 6776653
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.93 E-value=7e-26 Score=210.78 Aligned_cols=218 Identities=17% Similarity=0.098 Sum_probs=160.3
Q ss_pred ceEEEeecCCChHHHHHHHHHHHCCCCCCCeeec--CCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hh-
Q 016868 109 SSAFIGKVGADEFGYMLADILKENNVNGAGMRFD--PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SL- 183 (381)
Q Consensus 109 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~--~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~- 183 (381)
++.++|.+|+|. |+++ |+++||+++++... .+ +|++.+ . .+ ..++++++.. +.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~-------------~--~g--~~l~~~~i~~~~~~~ 69 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSN-HTGYAH-------------W--KG--QVLNSDELQELYEGL 69 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESS-CTTSSC-------------C--CE--EECCHHHHHHHHHHH
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecC-CCCcCC-------------c--cC--ccCCHHHHHHHHHHH
Confidence 567889999998 9988 99999999887653 21 222111 1 11 1245554431 11
Q ss_pred ----cCCccEEEEccccccCchhHHHHHHHHHHHHHCCCe--EEEeCCCCCC------CCCCHHHHHHHHHH-HhhhCCE
Q 016868 184 ----ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV--LSYDPNLRLP------LWPSADKAREGILS-IWETADI 250 (381)
Q Consensus 184 ----i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~--v~~D~~~~~~------~~~~~~~~~~~~~~-~l~~~dv 250 (381)
+.++++++++... .+...+.+.++++.++++|.+ +++||+.+.. +|.. +...+.+.+ +++++|+
T Consensus 70 ~~~~~~~~~~v~~G~~~--~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~-~~~~~~l~~~ll~~~di 146 (312)
T 2yxt_A 70 RLNNMNKYDYVLTGYTR--DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVP-EDLLPVYKEKVVPLADI 146 (312)
T ss_dssp HHTTCCCCSEEEECCCC--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSC-TTHHHHHHHTTGGGCSE
T ss_pred HhcCCccCCEEEECCCC--CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCC-HHHHHHHHHHhhhhCCE
Confidence 6778998876432 333456667888888887754 8899986543 4432 245556665 8999999
Q ss_pred EecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCC------ceEEE-------eC-C----ceEEEccccc
Q 016868 251 IKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD------GCRYY-------TK-D----FSGRVQGLKV 309 (381)
Q Consensus 251 l~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~------G~~~~-------~~-~----~~~~~~~~~v 309 (381)
++||++|++.|+|....+. .++++.|++.|++.||||.|+. |++++ ++ + +.++++++++
T Consensus 147 l~pN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (312)
T 2yxt_A 147 ITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV 226 (312)
T ss_dssp ECCCHHHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC
T ss_pred EcCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc
Confidence 9999999999998764332 4566788889999999998876 47765 44 2 5678888888
Q ss_pred cccCCCCccHHHHHHHHHHHHc-CCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 310 EAVDATGAGDAFVAGILSQLST-DFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 310 ~vvdttGAGDaF~ag~l~~l~~-g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
++ ||+||||+|+|+|+++|++ |++ +++|+++|+++++.++++
T Consensus 227 ~v-dttGAGDaf~a~~~~~l~~~g~~-------l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 227 DA-VFVGTGDLFAAMLLAWTHKHPNN-------LKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp SS-CCSSHHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCchHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 87 9999999999999999998 999 999999999999888753
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.93 E-value=1.3e-25 Score=206.18 Aligned_cols=226 Identities=18% Similarity=0.131 Sum_probs=164.7
Q ss_pred cCCceEE-EeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch---
Q 016868 106 LGGSSAF-IGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--- 181 (381)
Q Consensus 106 LG~~v~l-i~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--- 181 (381)
||..... +|.+|+| .....|++.||++.++.. . +..+.+|.+.+.. ..++++.+..
T Consensus 19 L~i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t--------~-i~~~~~g~~~~~g-------~~~~~~~~~~~~~ 78 (283)
T 2ddm_A 19 VAVQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT--------V-LLSNTPHYDTFYG-------GAIPDEWFSGYLR 78 (283)
T ss_dssp EEEEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE--------E-EESSCTTSSCCCE-------EECCHHHHHHHHH
T ss_pred EEEecccCCCcchHH----HHHHHHHHcCCeeeEEeE--------E-EeccCCCcCceee-------eeCCHHHHHHHHH
Confidence 4444344 6777776 245688889999887643 1 2224456554211 1234433321
Q ss_pred ---h--hcCCccEEEEccccccCchhHHHHHHHHHHHHH--CCCeEEEeCCCCC---CCCCCHHHHHHHHHHHhhhCCEE
Q 016868 182 ---S--LITKAKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL---PLWPSADKAREGILSIWETADII 251 (381)
Q Consensus 182 ---~--~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~--~g~~v~~D~~~~~---~~~~~~~~~~~~~~~~l~~~dvl 251 (381)
+ .++++++++++.+. .....+.+.++++.+++ .++++++||+.+. .+|.+.+.......++++++|++
T Consensus 79 ~l~~~~~~~~~~~v~~G~l~--~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil 156 (283)
T 2ddm_A 79 ALQERDALRQLRAVTTGYMG--TASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGI 156 (283)
T ss_dssp HHHHTTCCTTCCEEEECCCS--CHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEE
T ss_pred HHHhcCCcccCCEEEECCcC--CHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEe
Confidence 1 45678999987643 23456777888888887 7999999998764 45644333333345688999999
Q ss_pred ecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCC-------ceEEEeCCceEEEccccccccCCCCccHHH
Q 016868 252 KISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD-------GCRYYTKDFSGRVQGLKVEAVDATGAGDAF 321 (381)
Q Consensus 252 ~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~-------G~~~~~~~~~~~~~~~~v~vvdttGAGDaF 321 (381)
++|+.|++.|+|....+. .++++++.+.|++.|+||.|++ |++++++++.++++++++. +||+||||+|
T Consensus 157 ~pN~~E~~~L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf 235 (283)
T 2ddm_A 157 TPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLF 235 (283)
T ss_dssp CCBHHHHHHHHTSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHH
T ss_pred cCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHH
Confidence 999999999999764432 3456778788999999999999 8999888888889988886 8999999999
Q ss_pred HHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcC
Q 016868 322 VAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361 (381)
Q Consensus 322 ~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G 361 (381)
+|+|++++++|++ +++|+++|+++++.++++..
T Consensus 236 ~a~~~~~l~~g~~-------~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 236 CAQLISGLLKGKA-------LTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999998654
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.89 E-value=8.7e-23 Score=187.62 Aligned_cols=160 Identities=16% Similarity=0.128 Sum_probs=124.9
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCCe-EEEeCCCCC----CCCCCHHHHHHHHHH-HhhhCCEEecCHHHHhh
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRL----PLWPSADKAREGILS-IWETADIIKISEEEISF 260 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~-v~~D~~~~~----~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E~~~ 260 (381)
+++++++.+. +.+.+..+++.+++.+.+ +++||+.+. .+|. +...+.+.+ +++.+|+++||+.|++.
T Consensus 95 ~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~--~~~~~~l~~~ll~~~dil~pN~~Ea~~ 167 (288)
T 1jxh_A 95 IDTTKIGMLA-----ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS--PSAIETLRVRLLPQVSLITPNLPEAAA 167 (288)
T ss_dssp CSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEEECCCC------CCC--HHHHHHHHHHTGGGCSEEECBHHHHHH
T ss_pred CCEEEECCCC-----CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCC--HHHHHHHHHHHHhhCcEEcCCHHHHHH
Confidence 6787776431 456778888999999986 999998764 2443 233344544 78999999999999999
Q ss_pred ccCC-CCCCh---HHHHHHHHhcCCCEEEEEecCCc-----eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc
Q 016868 261 LTQG-EDPYD---DAVVYKLFHANLKLLLVTEGPDG-----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 331 (381)
Q Consensus 261 l~~~-~~~~~---~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~ 331 (381)
|++. ...+. .+++++|.+.|++.||||.|++| ++++++++.+++++++++++||+||||+|+|+|+++|++
T Consensus 168 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~ 247 (288)
T 1jxh_A 168 LLDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR 247 (288)
T ss_dssp HHTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG
T ss_pred HcCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHc
Confidence 9987 54332 35567888899999999999999 888888778889998899999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 332 DFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 332 g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
|++ +++|+++|+++++.++++.
T Consensus 248 g~~-------~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 248 HRS-------WGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp SSS-------HHHHHHHHHHHHHHHHTTG
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999999766
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.88 E-value=1.4e-22 Score=183.32 Aligned_cols=161 Identities=19% Similarity=0.144 Sum_probs=126.8
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCC-CeEEEeCCCCCC----CCCCHHHHHHHH-HHHhhhCCEEecCHHHHh
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLP----LWPSADKAREGI-LSIWETADIIKISEEEIS 259 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g-~~v~~D~~~~~~----~~~~~~~~~~~~-~~~l~~~dvl~~N~~E~~ 259 (381)
+.+.++++.+ . +.+....+++.+++.+ +++++||+.+.. +|. +...+.+ .++++++|+++||+.|++
T Consensus 70 ~~~~v~~G~l--~---~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~--~~~~~~~~~~ll~~~dil~pN~~E~~ 142 (258)
T 1ub0_A 70 PLHAAKTGAL--G---DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLA--KEAAAALKERLFPLADLVTPNRLEAE 142 (258)
T ss_dssp CCSEEEECCC--C---SHHHHHHHHHHHHHTTCCSEEECCCC---------C--HHHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCEEEECCc--C---CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccC--hHHHHHHHHhhcccCeEEeCCHHHHH
Confidence 3677777642 1 3456677788888888 899999986543 443 1223344 457899999999999999
Q ss_pred hccCCCCCCh---HHHHHHHHhcCCCEEEEEecCC-c----eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc
Q 016868 260 FLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD-G----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 331 (381)
Q Consensus 260 ~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~-G----~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~ 331 (381)
.|++....+. .++++++.+.|++.|+||.|++ | ++++++++.+++++++++++||+||||+|+|+|++++++
T Consensus 143 ~L~g~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 222 (258)
T 1ub0_A 143 ALLGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK 222 (258)
T ss_dssp HHHCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9998765432 3556778888999999999998 8 788888788889998899999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 332 DFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 332 g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
|++ +++|+++|+++++.++++.
T Consensus 223 g~~-------~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 223 GRP-------LAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999888754
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.87 E-value=4.9e-21 Score=174.40 Aligned_cols=163 Identities=16% Similarity=0.126 Sum_probs=132.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCC-eEEEeCCCCCCCCCC--HHHHHHHHH-HHhhhCCEEecCHHHHhhc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRLPLWPS--ADKAREGIL-SIWETADIIKISEEEISFL 261 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~-~v~~D~~~~~~~~~~--~~~~~~~~~-~~l~~~dvl~~N~~E~~~l 261 (381)
+.|.++++.+ .. .+....+++.+++.+. ++++||+.+...|.. .+...+.+. ++++++|+++||+.|++.|
T Consensus 74 ~~d~v~~G~l--~~---~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKTGML--PT---VDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEECCC--CS---HHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC--CC---HHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 5788887653 12 4667788888888898 599999877654432 122344554 6889999999999999999
Q ss_pred cCCC-CCCh---HHHHHHHHhcCCCEEEEEecC--Cce----EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc
Q 016868 262 TQGE-DPYD---DAVVYKLFHANLKLLLVTEGP--DGC----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 331 (381)
Q Consensus 262 ~~~~-~~~~---~~~~~~l~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~ 331 (381)
++.. ..+. .++++++.+.|++.|+||.|. +|+ +++++++.+++++++++++||+||||+|+|+|++++++
T Consensus 149 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 149 SGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp HTCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9876 4332 355678888999999999999 785 77777778889999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 332 DFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 332 g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
|++ +++|+++|+++++.++++.
T Consensus 229 g~~-------~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 229 GAE-------VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999999864
No 56
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.84 E-value=5.2e-20 Score=168.98 Aligned_cols=165 Identities=17% Similarity=0.108 Sum_probs=132.1
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCC--CCC-CHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP--LWP-SADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~--~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
..|.+.++- +.+....+.+.++++.+++.++++++||+.+.. +|. ..+...+.++++++.+|+++||..|++.|+
T Consensus 77 ~~~aik~G~--l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGY--LGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECC--CSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEECC--CCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 567777763 335555677888888877678999999987654 454 235566777889999999999999999999
Q ss_pred CCCCC------ChHHHHHHHHhcCCCEEEEEecC-------CceEEEeCC--ceEEEccccccccCCCCccHHHHHHHHH
Q 016868 263 QGEDP------YDDAVVYKLFHANLKLLLVTEGP-------DGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILS 327 (381)
Q Consensus 263 ~~~~~------~~~~~~~~l~~~g~~~vvvt~G~-------~G~~~~~~~--~~~~~~~~~v~vvdttGAGDaF~ag~l~ 327 (381)
|.... +..+++++|.+.|++.|+||.|. .|+++++++ +.++++.+++. +|++|+||+|+|+|++
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a 233 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITG 233 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHH
Confidence 98643 23456788889999999999653 577888763 45678887775 8999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 328 QLSTDFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 328 ~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
+|++|.+ +++|+++|++++..++.+-
T Consensus 234 ~l~~g~~-------l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 234 SLMQGDS-------LPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999988887653
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.83 E-value=9.4e-20 Score=166.42 Aligned_cols=162 Identities=17% Similarity=0.152 Sum_probs=127.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCC--CCCC-CHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL--PLWP-SADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~--~~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
+.|.+.++.+ .+....+.+.++++.. .+.++++||+.+. .+|. ..+...+.+.++++.+|+++||..|++.|+
T Consensus 74 ~~daik~G~l--~s~~~i~~v~~~l~~~--~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~ 149 (282)
T 3h74_A 74 HFDQALIGYV--GSVALCQQITTYLEQQ--TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLT 149 (282)
T ss_dssp CCSEEEECCC--CSHHHHHHHHHHHHHS--CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHC--CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHh
Confidence 5678877643 2333344444444433 4689999998874 4454 235566777889999999999999999999
Q ss_pred CCCCC---ChHHHHHHHHh-cCC-CEEEEEecC----CceEEEe-CCceEEEccccccccCCCCccHHHHHHHHHHHHcC
Q 016868 263 QGEDP---YDDAVVYKLFH-ANL-KLLLVTEGP----DGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 332 (381)
Q Consensus 263 ~~~~~---~~~~~~~~l~~-~g~-~~vvvt~G~----~G~~~~~-~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g 332 (381)
|.... +..+++++|.+ .|+ +.|+||.|. .|+++++ +++.++++++++. +|++|+||+|+|+|+++|++|
T Consensus 150 g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g 228 (282)
T 3h74_A 150 GAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGRG 228 (282)
T ss_dssp TCCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHCC
Confidence 87642 44677888888 999 999999994 7888885 6667788888775 899999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 333 FSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 333 ~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
++ +++|+++|+++++.++++
T Consensus 229 ~~-------l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 229 YP-------LAPTLARANQWLNMAVAE 248 (282)
T ss_dssp CC-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999998888764
No 58
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.83 E-value=1.8e-19 Score=165.36 Aligned_cols=164 Identities=19% Similarity=0.099 Sum_probs=130.8
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHHHCC--CeEEEeCCCCC----CCCCCHHHHHHHHHH-HhhhCCEEecCHHH
Q 016868 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRL----PLWPSADKAREGILS-IWETADIIKISEEE 257 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g--~~v~~D~~~~~----~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E 257 (381)
.++|++..+. +.+....+.+.++++.+++.+ +++++||.... .+|. +...+.+.+ +++.+|+++||..|
T Consensus 76 ~~~d~v~~G~--l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~--~~~~~~l~~~ll~~~diitpN~~E 151 (289)
T 3pzs_A 76 KDCDAVLSGY--IGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVA--PGVAEFFCNEALPASDMIAPNLLE 151 (289)
T ss_dssp GGCCEEEECC--CSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSC--HHHHHHHHHTHHHHCSEECCCHHH
T ss_pred cCCCEEEECC--CCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccC--HHHHHHHHHHhhccCCEEeCCHHH
Confidence 5788876554 345566778888898888766 88999995432 2343 345555654 88999999999999
Q ss_pred HhhccCCCCCCh---HHHHHHHHhcCCCEEEEEec-CCce-------EEEeCCceEEEccccccc--cCCCCccHHHHHH
Q 016868 258 ISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEG-PDGC-------RYYTKDFSGRVQGLKVEA--VDATGAGDAFVAG 324 (381)
Q Consensus 258 ~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G-~~G~-------~~~~~~~~~~~~~~~v~v--vdttGAGDaF~ag 324 (381)
++.|+|....+. .+++++|.+.|++.|+||.| .+|+ +++++++.++++++++++ +|++|+||+|+|+
T Consensus 152 ~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~ 231 (289)
T 3pzs_A 152 LEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGL 231 (289)
T ss_dssp HHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHH
Confidence 999999875543 34567888899999999985 5787 777777788888888876 9999999999999
Q ss_pred HHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 325 ILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 325 ~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
|++++++|++ +++|+++|+++++..+++
T Consensus 232 ~~~~l~~g~~-------~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 232 LLVNLLKGEP-------LDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHTTCC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999987776654
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.80 E-value=1.8e-18 Score=159.27 Aligned_cols=163 Identities=13% Similarity=0.049 Sum_probs=122.9
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHHHCC------CeEEEeCCCCCC--CCCCHHHHHHHHHHHhhhCCEEecCHH
Q 016868 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG------VVLSYDPNLRLP--LWPSADKAREGILSIWETADIIKISEE 256 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g------~~v~~D~~~~~~--~~~~~~~~~~~~~~~l~~~dvl~~N~~ 256 (381)
.++|.+..+. +.+....+.+.++++..++.+ .++++||..... +|.. +...+.+.++++.+|+++||..
T Consensus 75 ~~~daV~tG~--l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~-~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGY--INNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCK-KEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEECC--CCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecC-HHHHHHHHHHhhhCCEecCCHH
Confidence 4678877654 335555677778888877654 789999976543 6643 4556677779999999999999
Q ss_pred HHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCCc-------eEEEeC------CceEEEccccccccCCCCccHH
Q 016868 257 EISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDG-------CRYYTK------DFSGRVQGLKVEAVDATGAGDA 320 (381)
Q Consensus 257 E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G-------~~~~~~------~~~~~~~~~~v~vvdttGAGDa 320 (381)
|++.|+|....+. .++++.|++.|++.|+||.|..| +++..+ ++.++++.++++. |++|+||+
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~ 230 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDV 230 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHH
Confidence 9999999876543 35567888899999999999988 333334 4667788888876 89999999
Q ss_pred HHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 321 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 321 F~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
|+|+|+++| +|++ +++|+++|+++....+.+
T Consensus 231 fsaal~a~l-~g~~-------~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 231 FAACLLAFS-HSHP-------MDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp HHHHHHHHH-TTSC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCC-------HHHHHHHHHHHHHHHHHH
Confidence 999999999 9999 999999999997666653
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.62 E-value=7.6e-15 Score=133.15 Aligned_cols=163 Identities=15% Similarity=0.014 Sum_probs=113.7
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEIS 259 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~ 259 (381)
+.++.++.+++..-. ..+...+.+.++++.+++.++++++||..... . ....+...++++ .+|+++||..|++
T Consensus 54 ~~~~~a~~lvi~~G~-~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~---~-~~~~~~~~~ll~~~~~~vitPN~~E~~ 128 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT-LSKESVEAMIIAGKSANEHGVPVILDPVGAGA---T-PFRTESARDIIREVRLAAIRGNAAEIA 128 (272)
T ss_dssp HHHHHSSEEEEECTT-CCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---B-HHHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhCCEEEEECCC-CCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCc---c-cchHHHHHHHHccCCCeEECCCHHHHH
Confidence 445667887763322 23445577778888888999999999963221 1 111234456676 8999999999999
Q ss_pred hccCCC-C--------CC---hHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHH
Q 016868 260 FLTQGE-D--------PY---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 327 (381)
Q Consensus 260 ~l~~~~-~--------~~---~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~ 327 (381)
.|+|.. . .+ ..++++.|.+.+...|++| |..+ +++++++.++++.....+.|++|+||+|.|.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa 206 (272)
T 1ekq_A 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (272)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHH
Confidence 999865 3 11 1345567766544455555 9887 5666667778887777788999999999888888
Q ss_pred HHHcCCccccchHHHHHHHHHHHH----HHHHHhh
Q 016868 328 QLSTDFSLLQKEDQLRDALRFANA----CGALTVM 358 (381)
Q Consensus 328 ~l~~g~~~~~~~~~l~~al~~A~~----~Aa~~~~ 358 (381)
.+.+|.+ +.+|+++|+. ++....+
T Consensus 207 ~la~g~~-------~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 207 FCAVEEN-------PLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHTTCSS-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHHHHh
Confidence 8888998 9999999886 5554444
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.61 E-value=7.1e-15 Score=146.08 Aligned_cols=159 Identities=18% Similarity=0.078 Sum_probs=118.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCC----CCCCCHHHHHHHHH-HHhhhCCEEecCHHHHhh
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGIL-SIWETADIIKISEEEISF 260 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~-~~l~~~dvl~~N~~E~~~ 260 (381)
+.|.+.++.+ +....+.+.++++..++.+.++++||+.+. .++. +...+.+. ++++.+|+++||..|++.
T Consensus 91 ~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~--~~~~~~l~~~Ll~~a~iitPN~~Ea~~ 165 (550)
T 3rm5_A 91 KCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAG--KDIVSLITEKVAPFADILTPNIPECYK 165 (550)
T ss_dssp CCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------C--TTHHHHHHHHTGGGCSEECCBHHHHHH
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCC--HHHHHHHHHHhhCcceEEecCHHHHHH
Confidence 6788887743 555566777777777666889999997542 2232 23344444 789999999999999999
Q ss_pred ccCCC--CCC---hHHHHHHHHhcCC-CEEEEEecCCc--------e--EEE--eCCceEEEccccccccCCCCccHHHH
Q 016868 261 LTQGE--DPY---DDAVVYKLFHANL-KLLLVTEGPDG--------C--RYY--TKDFSGRVQGLKVEAVDATGAGDAFV 322 (381)
Q Consensus 261 l~~~~--~~~---~~~~~~~l~~~g~-~~vvvt~G~~G--------~--~~~--~~~~~~~~~~~~v~vvdttGAGDaF~ 322 (381)
|+|.. ..+ ..++++.|.+.|. +.||||.|..+ + +++ ++++.++++.++++.+|++|+||+|+
T Consensus 166 L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fs 245 (550)
T 3rm5_A 166 LLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLA 245 (550)
T ss_dssp HHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHH
Confidence 99974 222 2456678888776 89999998763 3 455 34567778888888899999999999
Q ss_pred HHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 016868 323 AGILSQLSTDFSLLQKEDQLRDALRFANACGALT 356 (381)
Q Consensus 323 ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~ 356 (381)
|+|++.+++|.+ +++|+++|+..-...
T Consensus 246 aaiaa~La~G~~-------l~eAv~~A~~~v~~a 272 (550)
T 3rm5_A 246 SAIASNLARGYS-------LPQSVYGGIEYVQNA 272 (550)
T ss_dssp HHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 999999999999 999999999644333
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.29 E-value=3.6e-11 Score=108.29 Aligned_cols=146 Identities=17% Similarity=0.039 Sum_probs=99.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISF 260 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~ 260 (381)
+.++.+|.+.++.-.. .+...+.+..+++.+++.++++++||..... . ....+....+++ .+++++||..|+..
T Consensus 52 ~~~~~~dalvi~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~---~-~~~~~~~~~ll~~~~~vITPN~~E~~~ 126 (265)
T 1v8a_A 52 EMIRLADAVVINIGTL-DSGWRRSMVKATEIANELGKPIVLDPVGAGA---T-KFRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECTTC-CHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---B-HHHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCEEEEEECCC-CHHHHHHHHHHHHHHHHcCCcEEEcCccccc---c-ccCHHHHHHHHHhCCcEEcCCHHHHHH
Confidence 4567788888753322 4433455667778888889999999964221 1 112233344444 39999999999999
Q ss_pred ccCCCC------------CChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHH
Q 016868 261 LTQGED------------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 328 (381)
Q Consensus 261 l~~~~~------------~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~ 328 (381)
|+|... .+..++++.+.+.+...|++| |..+ +++++++.++++.......+++|+||+|.|.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d-~i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~ 204 (265)
T 1v8a_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVD-YVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCc-EEEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHH
Confidence 987541 112345677776665566766 8766 45566667777765555669999999999999999
Q ss_pred HHcCCc
Q 016868 329 LSTDFS 334 (381)
Q Consensus 329 l~~g~~ 334 (381)
+.+|.+
T Consensus 205 lA~g~~ 210 (265)
T 1v8a_A 205 VAVTEP 210 (265)
T ss_dssp HTTSCH
T ss_pred HhcCCC
Confidence 998864
No 63
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.13 E-value=5.3e-10 Score=102.71 Aligned_cols=170 Identities=14% Similarity=0.087 Sum_probs=104.2
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHH-h-hhCCEEecCHHHHhh
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSI-W-ETADIIKISEEEISF 260 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~-l-~~~dvl~~N~~E~~~ 260 (381)
.+++.|.+.++--...++...+.+.++++.++ .++++++|+. .......-..+ + +..++|+||..|++.
T Consensus 122 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~l~L~~~~~viTPN~~E~~~ 192 (311)
T 3bgk_A 122 QITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGS--------AINLLAKRKPAIWPTKQIILTPHQKEWER 192 (311)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETH--------HHHHHHHCC-CCCSCSCEEEECCSCC-CT
T ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCC--------hhhhhccChhhcCCCCCEEECCcHHHHHH
Confidence 44567888776312223333445555555443 5889999983 11111110011 3 467899999999999
Q ss_pred ccCCCCCCh-HH----HHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHH-Hc-CC
Q 016868 261 LTQGEDPYD-DA----VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQL-ST-DF 333 (381)
Q Consensus 261 l~~~~~~~~-~~----~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l-~~-g~ 333 (381)
|+|....+. ++ +++++.+ + .+|+..| .+.++++ ++.+++.....+..+++|+||+| +|+++++ .+ |.
T Consensus 193 L~g~~~~~~~~d~~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~L-ag~iaa~lA~~g~ 266 (311)
T 3bgk_A 193 LSGLTIPEQIEAATQTALAHFPK-E--TILVAKS-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTL-AGMIAGFVAQFHT 266 (311)
T ss_dssp TTCCCSTTCCHHHHHHHHTTSCT-T--CEEEECS-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHH-HHHHHHHHHHCCS
T ss_pred HhCCCCCcchhhHHHHHHHHHhc-C--CEEEEeC-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHH-HHHHHHHHHccCC
Confidence 999765432 22 3344444 3 3555556 6677777 54456666677888999999998 5555555 68 99
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhh---cCCCCCCCCHHHHHHHHh
Q 016868 334 SLLQKEDQLRDALRFANACGALTVME---RGAIPALPTREAVLNAIH 377 (381)
Q Consensus 334 ~~~~~~~~l~~al~~A~~~Aa~~~~~---~G~~~~~~~~~~v~~~l~ 377 (381)
+ +.+|+.+|+++.+...+. .| ++ ....+|.+.+.
T Consensus 267 ~-------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l~ 303 (311)
T 3bgk_A 267 D-------RFEVAAAAVFLHSYIADQLSKEA--YV-VLPTRISAEIT 303 (311)
T ss_dssp C-------HHHHHHHHHHHHHHHHHHHHTTC--SS-CCHHHHHHHHH
T ss_pred C-------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHHH
Confidence 8 999999987776664331 24 23 46667766554
No 64
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.12 E-value=8.6e-10 Score=101.27 Aligned_cols=169 Identities=11% Similarity=-0.050 Sum_probs=102.7
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh--hhCCEEecCHHHHhh
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW--ETADIIKISEEEISF 260 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l--~~~dvl~~N~~E~~~ 260 (381)
.+++++.+.++--...++...+.+.++++.++ .++++++|+. .......-..++ +..++|+||..|++.
T Consensus 108 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~~l~~~~~~viTPN~~E~~~ 178 (310)
T 2r3b_A 108 VVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGS--------AITLFSQGNFSLTYPEKVVFTPHQMEWQR 178 (310)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETH--------HHHHHHHTTCCCSSGGGEEEECCHHHHHH
T ss_pred HhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCC--------cchhcccchhhhcCCCCEEEcCCHHHHHH
Confidence 34567888776312223333445555555443 5889999983 111111100112 467899999999999
Q ss_pred ccCCCCCCh-----HHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCcc
Q 016868 261 LTQGEDPYD-----DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 335 (381)
Q Consensus 261 l~~~~~~~~-----~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~ 335 (381)
|+|....+. .++++++ ++ +|+..| .+.++++ ++..++.....+..+++|+||+|+|.+.+.+.+|.+
T Consensus 179 L~g~~~~~~~~~~a~~aA~~l---g~--~VvlKG-~~~vi~~-~~~~~~~~~g~~~~~t~GtGD~Lag~Iaa~lA~g~~- 250 (310)
T 2r3b_A 179 LSHLPIEQQTLANNQRQQAKL---GS--TIVLKS-HRTTIFH-AGEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQFKP- 250 (310)
T ss_dssp HHCCCGGGCCHHHHHHHHHHH---TS--EEEECS-TTCEEEC-SSSCEECCCCCGGGCSTTHHHHHHHHHHHHHHHSCS-
T ss_pred HhCCCCCcccchHHHHHHHHh---Cc--EEEEeC-CceEEEE-CCEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC-
Confidence 999764332 2233444 43 556666 5667776 443455666677889999999975544444469998
Q ss_pred ccchHHHHHHHHHHHHHHHHHhh---hcCCCCCCCCHHHHHHHHh
Q 016868 336 LQKEDQLRDALRFANACGALTVM---ERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 336 ~~~~~~l~~al~~A~~~Aa~~~~---~~G~~~~~~~~~~v~~~l~ 377 (381)
+.+|+..|+.+.+..-. ..| ++ ....+|.+.+.
T Consensus 251 ------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l~ 286 (310)
T 2r3b_A 251 ------TIETIAGAVYLHSLIGDDLAKTD--YV-VLPTKISQALP 286 (310)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHTTTC--SS-CCHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHHH
Confidence 89999988776665433 224 23 45666665543
No 65
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.10 E-value=8.6e-09 Score=92.47 Aligned_cols=164 Identities=13% Similarity=-0.034 Sum_probs=109.5
Q ss_pred CChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh-hhCCEEe
Q 016868 174 LQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIK 252 (381)
Q Consensus 174 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~ 252 (381)
..++++. +..+.++.+.++--. ..+...+.+..+++.+++.++++++||..... .. ...+....++ ..+++++
T Consensus 47 ~~~~e~~-e~~~~a~alvIn~G~-l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~ga---s~-~r~~~~~~Ll~~~~~VIt 120 (273)
T 3dzv_A 47 DDPREFP-QMFQQTSALVLNLGH-LSQEREQSLLAASDYARQVNKLTVVDLVGYGA---SD-IRNEVGEKLVHNQPTVVK 120 (273)
T ss_dssp CCGGGHH-HHHTTCSEEEEECCS-CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTS---CH-HHHHHHHHHHHTCCSEEE
T ss_pred CCHHHHH-HHHHHCCeEEEecCC-CChHHHHHHHHHHHHHHHcCCcEEEchhhcCC---cc-cCHHHHHHHHhcCCcEEC
Confidence 3344442 567778888776433 34444566777788889999999999964322 11 1122233333 3689999
Q ss_pred cCHHHHhhccCCCCC-----------------ChHHHHHHHHhcCC-CEEEEEecCCceEEEeCCceEEEccccccccCC
Q 016868 253 ISEEEISFLTQGEDP-----------------YDDAVVYKLFHANL-KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDA 314 (381)
Q Consensus 253 ~N~~E~~~l~~~~~~-----------------~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdt 314 (381)
||..|+..|+|.... +..++++.+.+... ..|++|-+. -+++++++.+.++......-.+
T Consensus 121 pN~~E~~~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~--D~i~dg~~~~~~~~G~~~~~~v 198 (273)
T 3dzv_A 121 GNLSEMRTFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ--DVLVSQEQVIVLQNGVPELDCF 198 (273)
T ss_dssp EEHHHHHHHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS--EEEECSSCEEEECCCCGGGGSS
T ss_pred CCHHHHHHHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe--eEEEcCCEEEEeCCCCcccCCc
Confidence 999999999986531 11234566766554 666666542 3556666666666544445567
Q ss_pred CCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 016868 315 TGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 352 (381)
Q Consensus 315 tGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~ 352 (381)
+|.||++.|.+.+.+.+|.+ +.+|+..|...
T Consensus 199 ~GtGc~Ls~~Iaa~lA~g~~-------~~~Aa~~A~~~ 229 (273)
T 3dzv_A 199 TGTGDLVGALVAALLGEGNA-------PMTAAVAAVSY 229 (273)
T ss_dssp TTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhCCCC-------HHHHHHHHHHH
Confidence 99999999999999999998 88888877654
No 66
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.88 E-value=7.8e-08 Score=86.69 Aligned_cols=170 Identities=15% Similarity=0.041 Sum_probs=108.4
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
.++++|++.++.- +..+ +...++++.+.+.+.++++|...-.. +.+ ......++++||..|++.|+
T Consensus 95 ~l~~~davviGPG-lg~~---~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l-~~~~~~~vlTPN~~E~~~L~ 160 (279)
T 3rpz_A 95 LEETYRAIAIGPG-LPQT---ESVQQAVDHVLTADCPVILDAGALAK---------RTY-PKREGPVILTPHPGEFFRMT 160 (279)
T ss_dssp CSSCCSEEEECTT-CCCC---HHHHHHHHHHTTSSSCEEECGGGCCS---------CCC-CCCSSCEEECCCHHHHHHHH
T ss_pred hccCCCEEEECCC-CCCC---HHHHHHHHHHHhhCCCEEEECCccch---------hhh-hhccCCEEEecCHHHHHHHh
Confidence 3567899888642 2121 23345666666778899999842110 000 00135789999999999999
Q ss_pred CCCC----CChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccc
Q 016868 263 QGED----PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 338 (381)
Q Consensus 263 ~~~~----~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~ 338 (381)
|... .+..++++++.+.+-. +|+-.|. +.++++.+..+++.....+...++|+||+++|.+.+.+.+|.+
T Consensus 161 g~~~~~~~~d~~~aa~~la~~~~~-~VvlKG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~---- 234 (279)
T 3rpz_A 161 GVPVNELQKKRAEYAKEWAAQLQT-VIVLKGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED---- 234 (279)
T ss_dssp CCCHHHHTTSHHHHHHHHHHHHTS-EEEECST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS----
T ss_pred CCCccchHHHHHHHHHHHHHHcCe-EEEEeCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCC----
Confidence 9763 2234556667654322 4555553 4566666655566665567788999999876666666779998
Q ss_pred hHHHHHHHHHHHH----HHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 339 EDQLRDALRFANA----CGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 339 ~~~l~~al~~A~~----~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+.+|+..|.. ++-...++.|.. + ....+|.+.+.
T Consensus 235 ---~~~A~~~a~~lh~~Ag~~a~~~~g~~-~-~~a~dl~~~lp 272 (279)
T 3rpz_A 235 ---PKHAVLNAVYLHGACAELWTDEHSAH-T-LLAHELSDILP 272 (279)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHSCTT-S-CCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHH
Confidence 8999988864 444445556654 3 46677766554
No 67
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.83 E-value=6.3e-08 Score=94.47 Aligned_cols=172 Identities=11% Similarity=-0.005 Sum_probs=108.3
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHH-HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAK-AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 260 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 260 (381)
+.++.+|.+.++.-...++. ..++++ .+++.++++++|+..-.. . . .+.+ +..+..++++||..|++.
T Consensus 316 ~~~~~~davviGpGlg~~~~----~~~~~~~~l~~~~~pvVlDadgl~~-l-~----~~ll-~~~~~~~vlTPN~~E~~~ 384 (502)
T 3rss_A 316 ELSKDVDVVAIGPGLGNNEH----VREFVNEFLKTLEKPAVIDADAINV-L-D----TSVL-KERKSPAVLTPHPGEMAR 384 (502)
T ss_dssp HHHTTCSEEEECTTCCCSHH----HHHHHHHHHHHCCSCEEECHHHHHT-C-C----HHHH-HHCSSCEEECCCHHHHHH
T ss_pred HHhccCCEEEEeCCCCCCHH----HHHHHHHHHHhcCCCEEEeCcccch-h-c----HHHH-hccCCCEEEeCCHHHHHH
Confidence 45678999988743222221 222222 445679999999842110 0 0 1112 122457899999999999
Q ss_pred ccCCCC----CChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccc
Q 016868 261 LTQGED----PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLL 336 (381)
Q Consensus 261 l~~~~~----~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~ 336 (381)
|+|... .+ .++++++.+.+- .+|+..|. +.++++.+.. ++.....+..+++|+||+|+|.+.+.+.+|.+
T Consensus 385 L~g~~~~~~~~d-~~aa~~la~~~~-~~VvlKG~-~~vi~~~~~~-~~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~-- 458 (502)
T 3rss_A 385 LVKKTVGDVKYN-YELAEEFAKEND-CVLVLKSA-TTIVTDGEKT-LFNITGNTGLSKGGSGDVLTGMIAGFIAQGLS-- 458 (502)
T ss_dssp HHTCCHHHHTTC-HHHHHHHHHHHT-SEEEECSS-SEEEECSSCE-EEECCCCGGGSSTTHHHHHHHHHHHHHHTTCC--
T ss_pred HhCCCccchHHH-HHHHHHHHHHcC-CEEEEeCC-CeEEEcCCEE-EEECCCCCccccCCchHHHHHHHHHHHhCCCC--
Confidence 998653 23 456667765432 35666664 4566666643 44444566789999999998888888889999
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhc--CCCCCCCCHHHHHHHHh
Q 016868 337 QKEDQLRDALRFANACGALTVMER--GAIPALPTREAVLNAIH 377 (381)
Q Consensus 337 ~~~~~l~~al~~A~~~Aa~~~~~~--G~~~~~~~~~~v~~~l~ 377 (381)
+.+|+..|+..-+..-... |.. + .+..+|.+.+.
T Consensus 459 -----~~~Aa~~A~~~hg~Ag~~aa~g~~-~-~~a~dl~~~lp 494 (502)
T 3rss_A 459 -----PLEASTVSVYLHGFAAELFEQDER-G-LTASELLRLIP 494 (502)
T ss_dssp -----HHHHHHHHHHHHHHHHHTCSSCGG-G-CCHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHH
Confidence 9999999887766653322 322 2 46667766553
No 68
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.66 E-value=4.2e-07 Score=86.83 Aligned_cols=166 Identities=13% Similarity=0.067 Sum_probs=100.3
Q ss_pred cccCCChHHHHHHHHHHcCC-ceEEEeecCCChHHHHHHHHHHHCCCCCC-----Ce------e-ecCCCCceEEEEEec
Q 016868 89 KKAPGGAPANVAVGIARLGG-SSAFIGKVGADEFGYMLADILKENNVNGA-----GM------R-FDPGARTALAFVTLR 155 (381)
Q Consensus 89 ~~~~GG~~~NvA~~la~LG~-~v~li~~vG~D~~g~~i~~~l~~~gi~~~-----~v------~-~~~~~~t~~~~~~~~ 155 (381)
..+.||.+.-+|..|+++|. +|.+.+..+.. ...+.| ..+|-+- .+ . ..++.+.-.-+++-.
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk----~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~Ey 187 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPK----RLAELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINRIFEF 187 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCH----HHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEEEE
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCH----HHHHhc-CCcceeecccCCceeecCchhhhccCCCCCcEEEEEc
Confidence 45799999999999999999 58888877664 333444 2222111 00 0 001122333333333
Q ss_pred CCCC---------------ceEEEecCCCc-cccCChhccch---hhcCCccEEEEccccccCc-----h----hHHHHH
Q 016868 156 SDGE---------------REFMFYRNPSA-DMLLQEAELDL---SLITKAKIFHYGSISLITE-----P----CKSAHI 207 (381)
Q Consensus 156 ~~g~---------------~~~~~~~~~~~-~~~~~~~~l~~---~~i~~~~~~~~~~~~~~~~-----~----~~~~~~ 207 (381)
+.|+ |-++..+..+. .... .+++.. +.-+.+|.++++|+..+.+ . ..+...
T Consensus 188 ~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~-~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~ 266 (474)
T 3drw_A 188 RKGLKFKLGDETIEIPNSGRFIVSARFESISRIET-REDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAK 266 (474)
T ss_dssp CTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSC-CTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHHH
T ss_pred CCCCeeecCCceEEccCCCeEEEEcCCCCHHhccc-cHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHHH
Confidence 3333 22333322222 2222 233331 2233689999999987665 1 123333
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCC
Q 016868 208 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG 264 (381)
Q Consensus 208 ~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~ 264 (381)
+.++..+..++++-|.... +.+.+.....+..+++.+|.+-+|+.|+..+.+.
T Consensus 267 e~i~~l~~~~~~iH~E~As----~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~ 319 (474)
T 3drw_A 267 EDIIEFKEKDVKIHVEFAS----VQDRKLRKKIITNILPFVDSVGIDEAEIAQILSV 319 (474)
T ss_dssp HHHHHHHHTTCEEEEECCC----CSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHH
T ss_pred HHHHHhcCCCCeEEEEeCc----cccHHHHHHHHHHhcccccccccCHHHHHHHHHH
Confidence 5555666889999999864 3456666777888999999999999999988864
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.51 E-value=5.6e-06 Score=81.36 Aligned_cols=162 Identities=14% Similarity=-0.034 Sum_probs=101.6
Q ss_pred CChhccchhhcCC-ccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCE
Q 016868 174 LQEAELDLSLITK-AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADI 250 (381)
Q Consensus 174 ~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dv 250 (381)
..++++. +..+. ++.++++--.+ .+ .+.+..+++.+++.++++++||..-.. . ....+...++++ ..+|
T Consensus 294 ~~~~E~~-e~~~~~~~alvin~G~l-~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a---~-~~r~~~~~~Ll~~~~~~v 365 (540)
T 3nl6_A 294 EIQSEVN-DLAAIPHATLLLNTGSV-AP--PEMLKAAIRAYNDVKRPIVFDPVGYSA---T-ETRLLLNNKLLTFGQFSC 365 (540)
T ss_dssp CCHHHHH-HHTTSTTCEEEEESSCS-CC--HHHHHHHHHHHHTTTCCEEEECTTCTT---S-HHHHHHHHHHTTSCCCSE
T ss_pred CCHHHHH-HHHhccCCeEEEeCCCC-CH--HHHHHHHHHHHHHcCCCEEEChHHhhc---c-cccHHHHHHHHhhCCCeE
Confidence 3344442 45666 78887764333 23 677788888889999999999964322 1 222345556776 7899
Q ss_pred EecCHHHHhhccCCCC--------------CChHHHHHHHHhcCCCEEEEEecCCceEEEeC------------------
Q 016868 251 IKISEEEISFLTQGED--------------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK------------------ 298 (381)
Q Consensus 251 l~~N~~E~~~l~~~~~--------------~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~------------------ 298 (381)
+++|..|+..|+|... .+..++++.+.+..-..|++ .|+. -++.++
T Consensus 366 ItpN~~E~~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvl-kG~~-D~I~dg~~~~~~~~~~~~~~~~~~ 443 (540)
T 3nl6_A 366 IKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVC-TGEF-DFIADGTIEGKYSLSKGTNGTSVE 443 (540)
T ss_dssp EEECHHHHHHHTTC--------------CCHHHHHHHHHHHHHTTSEEEE-CSSS-EEEEECCGGGBCCSSSCCSSCCTT
T ss_pred ECCCHHHHHHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEE-cCCC-eEEECCCccccccccccccccccC
Confidence 9999999999998642 11123456666644444444 4433 344444
Q ss_pred -CceEEEcccc-ccccCCCCccHHHHHHHHHHHHcCC---ccccchHHHHHHHHHHHHH
Q 016868 299 -DFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDF---SLLQKEDQLRDALRFANAC 352 (381)
Q Consensus 299 -~~~~~~~~~~-v~vvdttGAGDaF~ag~l~~l~~g~---~~~~~~~~l~~al~~A~~~ 352 (381)
+..+.++.-. .-.-.++|.||++.+.+.+.+..+. + +.+|+..|...
T Consensus 444 ~~~~~~~~~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~-------~~~Aa~~a~~~ 495 (540)
T 3nl6_A 444 DIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGN-------LFHAVVAGVML 495 (540)
T ss_dssp SSCEEEEECSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCB-------HHHHHHHHHHH
T ss_pred CccEEEECCCChhhccCccCchHHHHHHHHHHHhcCcCCCC-------HHHHHHHHHHH
Confidence 3444554433 2223469999999998888888876 5 66676665543
No 70
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.46 E-value=1.5e-05 Score=76.39 Aligned_cols=161 Identities=10% Similarity=0.141 Sum_probs=98.1
Q ss_pred cCCChHHHHHHHHHHcCCceEE--EeecCCChHHHHHHHHHHHCCCCCCCeee-------------cCCCCceEEEEEec
Q 016868 91 APGGAPANVAVGIARLGGSSAF--IGKVGADEFGYMLADILKENNVNGAGMRF-------------DPGARTALAFVTLR 155 (381)
Q Consensus 91 ~~GG~~~NvA~~la~LG~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~~v~~-------------~~~~~t~~~~~~~~ 155 (381)
+.||.+..+|..|+++|.++.+ ++.+|.. +.+.|...+|.+ ... ....+....+++-.
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~~-----~~~lf~~~~i~~--p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef 181 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSRL-----QANLFLDGPIYV--PTLENGEVKLIHPKEFSGDEENCIHYIYEF 181 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCHH-----HHTTSCSSSEEE--EEEETTEEEEECGGGCSCCCCCCEEEEEEE
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH-----HHHhcCCCCeEe--ecccCCccccccchhhccCCCCCceEEEEc
Confidence 8999999999999999999988 7776652 444443223322 001 01234555556555
Q ss_pred CCCCc----------eEEEecCCCccccCChhccch---hhcCCccEEEEccccccCchh----HHHHHHHHHHHHHCCC
Q 016868 156 SDGER----------EFMFYRNPSADMLLQEAELDL---SLITKAKIFHYGSISLITEPC----KSAHIAAAKAAKDAGV 218 (381)
Q Consensus 156 ~~g~~----------~~~~~~~~~~~~~~~~~~l~~---~~i~~~~~~~~~~~~~~~~~~----~~~~~~~l~~a~~~g~ 218 (381)
+.|++ +|+...+.........+++.. +...++|.+.++|+..+.+.+ .+...+.++..++.++
T Consensus 182 ~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~ 261 (455)
T 1ua4_A 182 PRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREI 261 (455)
T ss_dssp CTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCc
Confidence 66652 333332222111112233321 223459999999998766532 2222222223467789
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccC
Q 016868 219 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263 (381)
Q Consensus 219 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 263 (381)
++-|+.... .+.+.....+ .+++++|.+-+|+.|+..+.+
T Consensus 262 ~iH~ElAs~----~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~ 301 (455)
T 1ua4_A 262 PVHLEFAFT----PDEKVREEIL-NVLGMFYSVGLNEVELASIME 301 (455)
T ss_dssp CEEEECCCC----CCHHHHHHHH-HHGGGCSEEEECHHHHHHHHH
T ss_pred eEEEEeCCc----cCHHHHHHHH-hhhccCcccccCHHHHHHHHH
Confidence 999998743 3455556666 999999999999999987754
No 71
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.31 E-value=1.9e-05 Score=70.24 Aligned_cols=144 Identities=16% Similarity=0.032 Sum_probs=84.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh-hhCCEEecCHHHHhh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISF 260 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~ 260 (381)
+..+.++.+.++--. +++...+.+....+.+.+.++|+++||..-.. .. ...+...+++ ..++++++|..|+..
T Consensus 52 e~~~~a~al~iNiGt-l~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ga---s~-~R~~~~~~ll~~~~~vIrgN~sEi~~ 126 (265)
T 3hpd_A 52 EMIRLADAVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TK-FRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECTT-CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BH-HHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCeEEEECCC-CChHHHHHHHHHHHHHHHcCCCEEEcCCCCCC---cH-HHHHHHHHHHhcCCcEEcCCHHHHHH
Confidence 444556666654322 34445566777788899999999999964322 11 1122333333 368999999999999
Q ss_pred ccCCCCC---------Ch---HHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHH
Q 016868 261 LTQGEDP---------YD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 328 (381)
Q Consensus 261 l~~~~~~---------~~---~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~ 328 (381)
|.|.... .. .++++.+.++.-..|++ .|+ .-++.++++.+.++.-..-.-..+|.||++.|.+.+.
T Consensus 127 L~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvl-kG~-~d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~ 204 (265)
T 3hpd_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAV-TGA-VDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEE-ESS-SEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhcccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEE-eCC-CeEEEcCCEEEEECCCChHhhcCCccchHHHHHHHHH
Confidence 9864211 11 23445565443334444 453 3455665655555443322333489999987665555
Q ss_pred HHcC
Q 016868 329 LSTD 332 (381)
Q Consensus 329 l~~g 332 (381)
+..+
T Consensus 205 lA~~ 208 (265)
T 3hpd_A 205 VAVT 208 (265)
T ss_dssp HTTS
T ss_pred HhcC
Confidence 5565
No 72
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=98.06 E-value=8.3e-05 Score=71.11 Aligned_cols=161 Identities=7% Similarity=0.097 Sum_probs=94.9
Q ss_pred cCCChHHHHHHHHHHcCCceEE--EeecCCChHHHHHHHHHHHCCCCCC-----Ceee------cCCCCceEEEEEecCC
Q 016868 91 APGGAPANVAVGIARLGGSSAF--IGKVGADEFGYMLADILKENNVNGA-----GMRF------DPGARTALAFVTLRSD 157 (381)
Q Consensus 91 ~~GG~~~NvA~~la~LG~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~-----~v~~------~~~~~t~~~~~~~~~~ 157 (381)
+.||.+.-+|..|+.+|.++.+ ++.+|. ...+.|...+|.+- .+.. ..+.+.-..+++-.+.
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~~ 191 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPK-----LQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFPR 191 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCH-----HHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEEECS
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCH-----HHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEEcCC
Confidence 8999999999999999999987 665554 34444432333210 0000 0012344444444444
Q ss_pred CC----------ceEEEecC-CCccccCChhccch---hhcCCccEEEEccccccCc-----hhHHH-HH---HHHHHHH
Q 016868 158 GE----------REFMFYRN-PSADMLLQEAELDL---SLITKAKIFHYGSISLITE-----PCKSA-HI---AAAKAAK 214 (381)
Q Consensus 158 g~----------~~~~~~~~-~~~~~~~~~~~l~~---~~i~~~~~~~~~~~~~~~~-----~~~~~-~~---~~l~~a~ 214 (381)
|+ .+|+...+ .+..... .+++.. +...++|.++++|+.++.+ ...+. +. +.++...
T Consensus 192 G~~~~~~~aPraNRfI~s~D~~N~~l~~-~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~ 270 (467)
T 1gc5_A 192 GFQVFDVQAPRENRFIANADDYNARVYM-RREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILN 270 (467)
T ss_dssp SCEETTEECSSCEEEEEECCSSTTTTCC-CHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHH
T ss_pred CCeecceeccCCceEEEecCCCCccccc-cHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhc
Confidence 44 23333222 2222222 222221 2335699999999977655 21222 22 2333335
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
..++++-+.... +.+.+-....+ .+++++|.+-+|+.|+..++
T Consensus 271 ~~~~~iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~ 313 (467)
T 1gc5_A 271 RYNVKSHFEFAY----TANRRVREALV-ELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp HTTCEEEEECCC----CCCHHHHHHHH-HHGGGCSEEEECHHHHHHHH
T ss_pred CCCCeEEEEECC----cccHHHHHHHH-hhccccccCccCHHHHHHHH
Confidence 678999999864 34566666777 99999999999999998544
No 73
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=98.04 E-value=0.0001 Score=70.42 Aligned_cols=160 Identities=11% Similarity=0.109 Sum_probs=92.9
Q ss_pred cCCChHHHHHHHHHHcCCceEE--EeecCCChHHHHHHHHHHHCCCCCC-----Ceee------cCCCCceEEEEEecCC
Q 016868 91 APGGAPANVAVGIARLGGSSAF--IGKVGADEFGYMLADILKENNVNGA-----GMRF------DPGARTALAFVTLRSD 157 (381)
Q Consensus 91 ~~GG~~~NvA~~la~LG~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~-----~v~~------~~~~~t~~~~~~~~~~ 157 (381)
+.||.+.-+|..|+++|.++.+ ++.+|. ...+.|...+|.+- .+.. ..+.+.-.-+++-.+.
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey~~ 186 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSE-----LQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFPR 186 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCH-----HHHHTSCSSSEEEEC------CEECGGGC----CCCEEECCEECT
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCH-----HHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcceEEEEcCC
Confidence 8999999999999999999887 565554 34444432222210 0000 0011223333333333
Q ss_pred CC-----------ceEEEecCCCccccCChhccch---hhcCCccEEEEccccccCchh----HHHHHHHHHHHHHCCCe
Q 016868 158 GE-----------REFMFYRNPSADMLLQEAELDL---SLITKAKIFHYGSISLITEPC----KSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 158 g~-----------~~~~~~~~~~~~~~~~~~~l~~---~~i~~~~~~~~~~~~~~~~~~----~~~~~~~l~~a~~~g~~ 219 (381)
|+ |-+...+..+..... .+++.. +...++|.++++|+..+.+.. .+...+.++..+..+++
T Consensus 187 G~~~~~~~aPraNRfI~s~D~~N~~l~~-~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~ 265 (457)
T 1l2l_A 187 NFKVLDFEAPRENRFIGAADDYNPILYV-REEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIR 265 (457)
T ss_dssp TCEETTEECSSCEEEEEEECSSGGGTCC-CHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCeecceecCCCCeEEEEcCCCCCCCcc-cHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCe
Confidence 33 333333222222222 223221 333569999999998766511 11122333344778999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhc
Q 016868 220 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL 261 (381)
Q Consensus 220 v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 261 (381)
+-+.... +.+.+-....+ .+++++|.+-+|+.|+..+
T Consensus 266 iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l 302 (457)
T 1l2l_A 266 AHLEFAF----TPDEVVRLEIV-KLLKHFYSVGLNEVELASV 302 (457)
T ss_dssp EEEECCC----CSSHHHHHHHH-HHGGGCSEEEECHHHHHHH
T ss_pred EEEEECC----cccHHHHHHHH-hhccccccCccCHHHHHHH
Confidence 9999864 33455666777 9999999999999999875
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.55 E-value=0.0011 Score=63.99 Aligned_cols=167 Identities=18% Similarity=0.105 Sum_probs=96.9
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCC
Q 016868 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG 264 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~ 264 (381)
++++.+.++.-.-.++ . + +.++++ . + ++++|-.- ++. ..+.+.++...|++||..|++.|++.
T Consensus 291 ~~~~a~~iGPGlG~~~-~-~-l~~~l~---~-~-p~VlDADa---L~~------~~~~~~~~~~~VlTPh~~E~~rL~g~ 353 (475)
T 3k5w_A 291 NLLSAFALGMGLENIP-K-D-FNRWLE---L-A-PCVLDAGV---FYH------KEILQALEKEAVLTPHPKEFLSLLNL 353 (475)
T ss_dssp SSCSEEEECTTCSSCC-T-T-HHHHHH---H-S-CEEEEGGG---GGS------GGGGTTTTSSEEEECCHHHHHHHHHH
T ss_pred cCCCEEEEcCCCCCCH-H-H-HHHHHh---c-C-CEEEECcc---cCC------chhhhccCCCEEECCCHHHHHHHhCC
Confidence 5678888764322222 1 2 334442 2 4 99999741 100 01112334568999999999999875
Q ss_pred -----CCCC----hHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCcc
Q 016868 265 -----EDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 335 (381)
Q Consensus 265 -----~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~ 335 (381)
+..+ ..++++++.+.....+|+-.|.. .++++++.. ++......-..+.|.||++++.+.+.+.+|.+
T Consensus 354 ~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~-~vI~~~~~~-~~~~~g~~~mat~GtGdvLsg~Iaa~lA~g~~- 430 (475)
T 3k5w_A 354 VGINISMLELLDNKLEIARDFSQKYPKVVLLLKGAN-TLIAHQGQV-FINILGSVALAKAGSGDVLAGLILSLLSQNYT- 430 (475)
T ss_dssp TSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSS-EEEEETTEE-EEECCCCGGGCSTTHHHHHHHHHHHHHHTTCC-
T ss_pred ccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCC-CEEECCCEE-EEECCCCCCCCCCCHHHHHHHHHHHHHHcCCC-
Confidence 3221 12455677665423344444533 344554433 33333334557899999999999999999998
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHhC
Q 016868 336 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 336 ~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
+.+|+..|...-+..-.......+ ....+|-+.+.+
T Consensus 431 ------~~~Aa~~a~~lhg~ag~~a~~~~~-~~a~dl~~~l~~ 466 (475)
T 3k5w_A 431 ------PLDAAINASLAHALASLEFKNNYA-LTPLDLIEKIKQ 466 (475)
T ss_dssp ------HHHHHHHHHHHHHHGGGGCSSTTC-CCHHHHHHHHHT
T ss_pred ------HHHHHHHHHHHHHHHHHHhccCCC-cCHHHHHHHhhh
Confidence 888888776655444333211123 467778776654
No 75
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=57.96 E-value=16 Score=27.68 Aligned_cols=80 Identities=15% Similarity=0.072 Sum_probs=56.6
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE 265 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~ 265 (381)
+++.+..+|. + +.+.+..+.+..+..++.++.||.. ..+..+..+.+.++.+...++...+. |.+
T Consensus 26 ~~~iI~t~Gs--i---~~~~l~~I~~~~~~r~VIi~TD~D~------~GekIRk~i~~~lp~~~hafi~r~~~----gVE 90 (119)
T 2fcj_A 26 PVVIVCTNGT--I---SDARLEELADELEGYDVYLLADADE------AGEKLRRQFRRMFPEAEHLYIDRAYR----EVA 90 (119)
T ss_dssp CCEEEECCSC--C---CHHHHHHHHHHTTTSEEEEECCSSH------HHHHHHHHHHHHCTTSEEECCCTTTC----STT
T ss_pred CCCEEEeCCc--c---CHHHHHHHHHHhcCCCEEEEECCCc------cHHHHHHHHHHHCCCCcEEeccCCcc----Ccc
Confidence 6777777774 2 3455556666666778888889852 34677888889999999999988874 666
Q ss_pred CCChHHHHHHHHhcC
Q 016868 266 DPYDDAVVYKLFHAN 280 (381)
Q Consensus 266 ~~~~~~~~~~l~~~g 280 (381)
..+.++..+.|....
T Consensus 91 ~a~~~~I~~aL~~~~ 105 (119)
T 2fcj_A 91 AAPIWHLAQVLLRAR 105 (119)
T ss_dssp TSCHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHhcc
Confidence 666666666666543
No 76
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=56.52 E-value=74 Score=25.32 Aligned_cols=73 Identities=11% Similarity=0.112 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEec-----CHHHHhhccCCCCCChHHHHHHHHh
Q 016868 204 SAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI-----SEEEISFLTQGEDPYDDAVVYKLFH 278 (381)
Q Consensus 204 ~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~-----N~~E~~~l~~~~~~~~~~~~~~l~~ 278 (381)
+.+.++++.+++.|..+.+..+... . .+.+..+++.+|.+.+ +.+....+.|......-+.++.+.+
T Consensus 19 ~~~~~l~~~~~~~g~~~~l~TNG~l----~----~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~~~~i~~~i~~l~~ 90 (182)
T 3can_A 19 EFLIDILKRCGQQGIHRAVDTTLLA----R----KETVDEVMRNCELLLIDLKSMDSTVHQTFCDVPNELILKNIRRVAE 90 (182)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTCC----C----HHHHHHHHHTCSEEEEECCCSCHHHHHHHHSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEECCCCC----C----HHHHHHHHhhCCEEEEECCCCCHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 4446888889999999999887542 1 2334455566777654 4555556666543222344466666
Q ss_pred cCCCEE
Q 016868 279 ANLKLL 284 (381)
Q Consensus 279 ~g~~~v 284 (381)
.|.+..
T Consensus 91 ~g~~v~ 96 (182)
T 3can_A 91 ADFPYY 96 (182)
T ss_dssp TTCCEE
T ss_pred CCCeEE
Confidence 676543
No 77
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=48.84 E-value=75 Score=27.69 Aligned_cols=91 Identities=11% Similarity=0.065 Sum_probs=50.7
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHHHC-CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEe-cCHHHHhhc
Q 016868 184 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK-ISEEEISFL 261 (381)
Q Consensus 184 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~-g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~-~N~~E~~~l 261 (381)
-.++|++.+++-... +...+.+..+++..++. ++++++|.. +.+..+..++. .+.++++- +|..+ ..+
T Consensus 45 ~~GAdiIDIg~~s~~-~eE~~rv~~vi~~l~~~~~~pisIDT~-------~~~v~~aal~a-~~Ga~iINdvs~~~-d~~ 114 (271)
T 2yci_X 45 EKGAHYLDVNTGPTA-DDPVRVMEWLVKTIQEVVDLPCCLDST-------NPDAIEAGLKV-HRGHAMINSTSADQ-WKM 114 (271)
T ss_dssp HTTCSEEEEECCSCS-SCHHHHHHHHHHHHHHHCCCCEEEECS-------CHHHHHHHHHH-CCSCCEEEEECSCH-HHH
T ss_pred HCCCCEEEEcCCcCc-hhHHHHHHHHHHHHHHhCCCeEEEeCC-------CHHHHHHHHHh-CCCCCEEEECCCCc-ccc
Confidence 357899998875422 22345566677766654 899999974 33444444432 24577774 55432 100
Q ss_pred cCCCCCChHHHHHHHHhcCCCEEEEEecCCc
Q 016868 262 TQGEDPYDDAVVYKLFHANLKLLLVTEGPDG 292 (381)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 292 (381)
++.+....+.++..|+.+.+++|
T Consensus 115 --------~~~~~~~a~~~~~vv~m~~d~~G 137 (271)
T 2yci_X 115 --------DIFFPMAKKYEAAIIGLTMNEKG 137 (271)
T ss_dssp --------HHHHHHHHHHTCEEEEESCBTTB
T ss_pred --------HHHHHHHHHcCCCEEEEecCCCC
Confidence 22333444566666666554444
No 78
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=38.26 E-value=1.9e+02 Score=24.85 Aligned_cols=61 Identities=11% Similarity=0.132 Sum_probs=35.4
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHHHC-CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEe-cC
Q 016868 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK-IS 254 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~-g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~-~N 254 (381)
.++|++.+++-.. .....+.+.+++...++. ++++++|.. +.+..+..++. .+.++++- +|
T Consensus 37 ~GAdiIDIg~g~~-~v~~~ee~~rvv~~i~~~~~~pisIDT~-------~~~v~~aAl~a-~~Ga~iINdvs 99 (262)
T 1f6y_A 37 GGARALDLNVGPA-VQDKVSAMEWLVEVTQEVSNLTLCLDST-------NIKAIEAGLKK-CKNRAMINSTN 99 (262)
T ss_dssp HTCSEEEEBCC-----CHHHHHHHHHHHHHTTCCSEEEEECS-------CHHHHHHHHHH-CSSCEEEEEEC
T ss_pred CCCcEEEECCCCC-CCChHHHHHHHHHHHHHhCCCeEEEeCC-------CHHHHHHHHhh-CCCCCEEEECC
Confidence 5789998886321 122456666777776665 889999974 23334444332 23566664 55
No 79
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=35.75 E-value=34 Score=25.15 Aligned_cols=32 Identities=25% Similarity=0.208 Sum_probs=26.6
Q ss_pred ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHH
Q 016868 311 AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 348 (381)
Q Consensus 311 vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~ 348 (381)
..|..|-||..-|-++|+|++|.- +.++|++.
T Consensus 63 R~DKh~kGd~aEA~iAyAWleG~i------s~eEavei 94 (133)
T 1ztd_A 63 RVDKHAKGDYAEALIAKAWLMGLI------SEREAVEI 94 (133)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTTSS------CHHHHHHH
T ss_pred cccccCccHHHHHHHHHHHHhccc------cHHHHHHH
Confidence 468899999999999999999864 27777764
No 80
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=35.44 E-value=2.2e+02 Score=24.71 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=54.5
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh-CCEEec-----CHHHHhh
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET-ADIIKI-----SEEEISF 260 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~-~dvl~~-----N~~E~~~ 260 (381)
+|++-+.-. .+.+...++++.+++.+.+|+..-....... +.+.+...+...... +|++++ +.++...
T Consensus 134 ~dyIDvEl~-----~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP-~~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~ 207 (276)
T 3o1n_A 134 VDMIDLELF-----TGDDEVKATVGYAHQHNVAVIMSNHDFHKTP-AAEEIVQRLRKMQELGADIPKIAVMPQTKADVLT 207 (276)
T ss_dssp CSEEEEEGG-----GCHHHHHHHHHHHHHTTCEEEEEEEESSCCC-CHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHH
T ss_pred CCEEEEECc-----CCHHHHHHHHHHHHhCCCEEEEEeecCCCCc-CHHHHHHHHHHHHHcCCCEEEEEecCCChHHHHH
Confidence 678766532 2345667788888899999987442211111 345666666666554 699986 2222222
Q ss_pred ccCCCCCChHHHHHHHHh--cCCCEEEEEecCCce
Q 016868 261 LTQGEDPYDDAVVYKLFH--ANLKLLLVTEGPDGC 293 (381)
Q Consensus 261 l~~~~~~~~~~~~~~l~~--~g~~~vvvt~G~~G~ 293 (381)
| ..+...+.+ ...+.+.+.+|+.|.
T Consensus 208 L--------l~~~~~~~~~~~~~PlIa~~MG~~G~ 234 (276)
T 3o1n_A 208 L--------LTATVEMQERYADRPIITMSMSKTGV 234 (276)
T ss_dssp H--------HHHHHHHHHHTCCSCCEEEECSGGGT
T ss_pred H--------HHHHHHHHhcCCCCCEEEEECCCchh
Confidence 2 112222222 456788899999985
No 81
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=34.00 E-value=21 Score=27.64 Aligned_cols=38 Identities=8% Similarity=0.159 Sum_probs=31.5
Q ss_pred CChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 93 GGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 93 GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
+|.+...+..|+..|+++.+++.+|.. ..+.|++ ||.+
T Consensus 65 ~g~g~~~~~~L~~~gv~~VI~g~iG~~-----a~~~L~~-GI~v 102 (136)
T 2re2_A 65 AARGVFMLKSALDHGANALVLSEIGSP-----GFNFIKN-KMDV 102 (136)
T ss_dssp SCHHHHHHHHHHHTTCSEEEESCCBHH-----HHHHHTT-TSEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHh-----HHHHHHC-CCEE
Confidence 677788999999999999999998864 4477888 8873
No 82
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=32.58 E-value=2e+02 Score=23.55 Aligned_cols=76 Identities=17% Similarity=0.086 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEec-----CHHHHhhccCCCCCChHHHHHHHH
Q 016868 203 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI-----SEEEISFLTQGEDPYDDAVVYKLF 277 (381)
Q Consensus 203 ~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~-----N~~E~~~l~~~~~~~~~~~~~~l~ 277 (381)
++.+.++++.+++.|..+.+..+.... ...+ .+..+++.+|.+.+ +.+..+.+.+.......+.++.+.
T Consensus 84 ~~~l~~l~~~~~~~~~~i~i~Tng~~~--~~~~----~~~~l~~~~~~v~isld~~~~~~~~~~~~~~~~~~~~~i~~l~ 157 (245)
T 3c8f_A 84 AEFVRDWFRACKKEGIHTCLDTNGFVR--RYDP----VIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLA 157 (245)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECCCCC--CCCH----HHHHHHHTCSEEEEECCCSSHHHHHHHHSSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCcC--cCHH----HHHHHHHhCCEEEEeCCCCCHHHhhhccCCCHHHHHHHHHHHH
Confidence 345678889999889888887764221 0122 23344455676654 566666676654322234556777
Q ss_pred hcCCCEE
Q 016868 278 HANLKLL 284 (381)
Q Consensus 278 ~~g~~~v 284 (381)
+.|.+..
T Consensus 158 ~~g~~v~ 164 (245)
T 3c8f_A 158 NKNVKVW 164 (245)
T ss_dssp HHTCCEE
T ss_pred hcCCEEE
Confidence 7777643
No 83
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=29.59 E-value=46 Score=28.33 Aligned_cols=49 Identities=8% Similarity=0.057 Sum_probs=32.8
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeec
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKV 116 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~v 116 (381)
++|+|-|.....-+=.+... .-.+-|+.|.-+|.++++.|.+|.+++.-
T Consensus 4 k~vlVTgG~T~E~IDpVR~I-------tN~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSI-------TNHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CEEEEECSBCEEESSSSEEE-------EECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEeCCCcccccCceeec-------cCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46777777543222111110 12367889999999999999999999853
No 84
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=28.96 E-value=26 Score=26.14 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=32.3
Q ss_pred CCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 92 PGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 92 ~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
.+|.+...+..|+..|.++.+++.+|.. ..+.|++.||.+
T Consensus 52 ~~g~g~~~~~~l~~~gv~~vi~~~iG~~-----a~~~L~~~GI~v 91 (120)
T 2wfb_A 52 SHGAGINAAQVLAKSGAGVLLTGYVGPK-----AFQALQAAGIKV 91 (120)
T ss_dssp SSCHHHHHHHHHHHHTEEEEECSCCCHH-----HHHHHHHTTCEE
T ss_pred CCCchHHHHHHHHHCCCCEEEECCCCHh-----HHHHHHHCCCEE
Confidence 4677778888898899999999987763 567788999874
No 85
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=25.83 E-value=43 Score=30.20 Aligned_cols=24 Identities=17% Similarity=0.152 Sum_probs=19.8
Q ss_pred CCChHHHHHHHHHHcCCceEEEee
Q 016868 92 PGGAPANVAVGIARLGGSSAFIGK 115 (381)
Q Consensus 92 ~GG~~~NvA~~la~LG~~v~li~~ 115 (381)
.|-.|.-+|..|++.|.+|.++-.
T Consensus 25 gG~~Gl~~A~~La~~G~~V~llE~ 48 (382)
T 1ryi_A 25 GGIIGSAIAYYLAKENKNTALFES 48 (382)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCHHHHHHHHHHHhCCCcEEEEeC
Confidence 355688999999999999999864
No 86
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=25.20 E-value=72 Score=25.70 Aligned_cols=36 Identities=11% Similarity=-0.205 Sum_probs=28.1
Q ss_pred ChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHH
Q 016868 94 GAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKE 131 (381)
Q Consensus 94 G~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~ 131 (381)
-++...+..|..+|.++..++.+++|. +.|.+.+++
T Consensus 23 tN~~~l~~~L~~~G~~v~~~~iv~Dd~--~~I~~~l~~ 58 (172)
T 3kbq_A 23 TNAAFIGNFLTYHGYQVRRGFVVMDDL--DEIGWAFRV 58 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCH--HHHHHHHHH
Confidence 356788889999999999999999983 445555554
No 87
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=24.89 E-value=20 Score=26.57 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=31.1
Q ss_pred CChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 93 GGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 93 GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
+|.+...+..|+..|.++.+++.+|.. ..+.|++.||.+
T Consensus 48 ~g~g~~~~~~l~~~gv~~vi~~~iG~~-----a~~~L~~~GI~v 86 (116)
T 1rdu_A 48 HGTGPKVVQSLVSKGVEYLIASNVGRN-----AFETLKAAGVKV 86 (116)
T ss_dssp CCSSCSHHHHHHTTTCCEEECSSCCSS-----CHHHHHTTTCEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHh-----HHHHHHHCCCEE
Confidence 455567888888899999999999986 345678888863
No 88
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=24.68 E-value=51 Score=28.73 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHcCCceEEEe
Q 016868 95 APANVAVGIARLGGSSAFIG 114 (381)
Q Consensus 95 ~~~NvA~~la~LG~~v~li~ 114 (381)
.|..+|..|+|+|.+|.++-
T Consensus 17 AGlsAA~~lar~g~~v~lie 36 (304)
T 4fk1_A 17 AGLNASLVLGRARKQIALFD 36 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEe
Confidence 35678889999999999885
No 89
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=24.42 E-value=65 Score=26.51 Aligned_cols=20 Identities=15% Similarity=0.174 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHcCCceEEEe
Q 016868 95 APANVAVGIARLGGSSAFIG 114 (381)
Q Consensus 95 ~~~NvA~~la~LG~~v~li~ 114 (381)
+|.-.|..|++.|.+|.++=
T Consensus 13 aGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 13 AGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEE
Confidence 47899999999999998884
No 90
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=23.70 E-value=27 Score=26.28 Aligned_cols=39 Identities=26% Similarity=0.290 Sum_probs=30.5
Q ss_pred CChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 93 GGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 93 GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
+|.+...+..|+..|.++.+++.+|.. ....|++.||.+
T Consensus 51 ~g~g~~~~~~l~~~gv~~vi~~~iG~~-----a~~~L~~~GI~v 89 (124)
T 1eo1_A 51 GGAGIRTAQIIANNGVKAVIASSPGPN-----AFEVLNELGIKI 89 (124)
T ss_dssp SSCSTTHHHHHHHTTCCEEEECCSSHH-----HHHHHHHHTCEE
T ss_pred CCCCHHHHHHHHHCCCCEEEECCcCHH-----HHHHHHHCCCEE
Confidence 455557888889999999999988763 566788888873
No 91
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=23.53 E-value=1.2e+02 Score=24.06 Aligned_cols=36 Identities=8% Similarity=-0.040 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHC
Q 016868 95 APANVAVGIARLGGSSAFIGKVGADEFGYMLADILKEN 132 (381)
Q Consensus 95 ~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~ 132 (381)
++...+..|..+|.++...+.++|| -+.|.+.+++.
T Consensus 32 n~~~l~~~L~~~G~~v~~~~iv~Dd--~~~i~~~l~~~ 67 (169)
T 1y5e_A 32 SGQLLHELLKEAGHKVTSYEIVKDD--KESIQQAVLAG 67 (169)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSS--HHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCeEeEEEEeCCC--HHHHHHHHHHH
Confidence 4567788889999999999999998 34566666553
No 92
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=23.45 E-value=2e+02 Score=22.74 Aligned_cols=34 Identities=9% Similarity=-0.033 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHH
Q 016868 95 APANVAVGIARLGGSSAFIGKVGADEFGYMLADILK 130 (381)
Q Consensus 95 ~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~ 130 (381)
+|...+..|..+|.++...+.|+||. +.+.+.++
T Consensus 41 ng~~L~~~L~~~G~~v~~~~iV~Dd~--~~i~~al~ 74 (178)
T 3iwt_A 41 SGDIIKQLLIENGHKIIGYSLVPDDK--IKILKAFT 74 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCH--HHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEEEEEeCCCH--HHHHHHHH
Confidence 45678999999999999999999983 44555555
No 93
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=23.27 E-value=3.5e+02 Score=23.08 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=54.1
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh-CCEEec-----CHHHHhh
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET-ADIIKI-----SEEEISF 260 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~-~dvl~~-----N~~E~~~ 260 (381)
+|++-+.-. ...+...++++.+++.+.++++..+.....+ +.+.+...+...... +|++++ +.++...
T Consensus 114 ~d~iDvEl~-----~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP-~~~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~ 187 (258)
T 4h3d_A 114 VDLIDVELF-----MGDEVIDEVVNFAHKKEVKVIISNHDFNKTP-KKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLV 187 (258)
T ss_dssp CSEEEEEGG-----GCHHHHHHHHHHHHHTTCEEEEEEEESSCCC-CHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHH
T ss_pred chhhHHhhh-----ccHHHHHHHHHHHHhCCCEEEEEEecCCCCC-CHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHH
Confidence 677765532 2345566778888899999988553222222 245566666665554 699875 2333322
Q ss_pred ccCCCCCChHHHHHHHHh--cCCCEEEEEecCCceE
Q 016868 261 LTQGEDPYDDAVVYKLFH--ANLKLLLVTEGPDGCR 294 (381)
Q Consensus 261 l~~~~~~~~~~~~~~l~~--~g~~~vvvt~G~~G~~ 294 (381)
|+ ++...+.+ ...+.+.+.+|+.|.+
T Consensus 188 Ll--------~~~~~~~~~~~~~P~I~~~MG~~G~~ 215 (258)
T 4h3d_A 188 LL--------EATNEMFKIYADRPIITMSMSGMGVI 215 (258)
T ss_dssp HH--------HHHHHHHHHTCSSCBEEEECTGGGGG
T ss_pred HH--------HHHHHHHHhcCCCCEEEEeCCCCChH
Confidence 21 12223322 2456788999998863
No 94
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=23.26 E-value=36 Score=25.37 Aligned_cols=38 Identities=11% Similarity=0.124 Sum_probs=28.3
Q ss_pred CChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 93 GGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 93 GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
+|.+ ..+..|...|.++.+++.+|.. ..+.|++.||.+
T Consensus 50 ~g~g-~~~~~L~~~gv~~vi~~~iG~~-----a~~~L~~~GI~v 87 (121)
T 2yx6_A 50 HGPG-DLPNFIKDHGAKIVLTYGIGRR-----AIEYFNSLGISV 87 (121)
T ss_dssp ---C-HHHHHHHHTTCCEEECSBCCHH-----HHHHHHHTTCEE
T ss_pred CCCC-HHHHHHHHcCCCEEEECCCCHh-----HHHHHHHCCCEE
Confidence 4444 7888888899999999988753 567788999874
No 95
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=22.74 E-value=92 Score=26.66 Aligned_cols=43 Identities=21% Similarity=0.124 Sum_probs=29.5
Q ss_pred CCChHHHHHHHHHHcCCceEEEeecCC-C--hHHHHHHHHHHHCCCC
Q 016868 92 PGGAPANVAVGIARLGGSSAFIGKVGA-D--EFGYMLADILKENNVN 135 (381)
Q Consensus 92 ~GG~~~NvA~~la~LG~~v~li~~vG~-D--~~g~~i~~~l~~~gi~ 135 (381)
-||.|+-+|+.|++.|.+|.++- ++. . ...+...+.+++.|+.
T Consensus 70 NGGDGlv~AR~L~~~G~~V~v~~-~~~~~~~~~~~~~~~~~~~~g~~ 115 (246)
T 1jzt_A 70 NGGDGLVCARHLKLFGYNPVVFY-PKRSERTEFYKQLVHQLNFFKVP 115 (246)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEC-CCCCTTCHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCeEEEEE-cCCCCCCHHHHHHHHHHHHcCCc
Confidence 47889999999999999998863 332 1 2334445566666654
No 96
>2yxh_A MAZG-related protein; TM0360, LEFT-handed superhelix fold, structural genomics; 2.00A {Thermotoga maritima}
Probab=21.71 E-value=2.4e+02 Score=20.80 Aligned_cols=53 Identities=11% Similarity=-0.010 Sum_probs=34.5
Q ss_pred ccHHHHHHHHHHHHc----CCccccchHHHHHHHHHHHHHHHHHhh-hcCCCCCCCCHHHHHHHHhC
Q 016868 317 AGDAFVAGILSQLST----DFSLLQKEDQLRDALRFANACGALTVM-ERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 317 AGDaF~ag~l~~l~~----g~~~~~~~~~l~~al~~A~~~Aa~~~~-~~G~~~~~~~~~~v~~~l~~ 378 (381)
-||.+...+.++... +.+ +++++..++.==..--. -.+.. .+ +.+++..+.++
T Consensus 54 lGDlLf~vv~la~~~~~~~~~d-------~e~al~~~~~K~~rR~~~v~~~~-~~-~~~e~~~~W~~ 111 (116)
T 2yxh_A 54 IGDMIYDALLVAAVAQRDYGID-------LESAIQKVVEKISHRKPWLFWEE-KI-SLEEAEKIWKE 111 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHCGGGGCSS-CC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHcCCCC-------HHHHHHHHHHHHHHHhHHHhCCC-CC-CHHHHHHHHHH
Confidence 599999999888776 888 99999876542221111 12221 23 88888877654
No 97
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.31 E-value=1.1e+02 Score=25.96 Aligned_cols=43 Identities=12% Similarity=0.018 Sum_probs=30.7
Q ss_pred CCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 92 PGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 92 ~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
.||-|..+|..|++.|.+|.+++. +....+.+.+.+++.|.+.
T Consensus 20 s~gIG~aia~~l~~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~ 62 (264)
T 3ucx_A 20 GPALGTTLARRCAEQGADLVLAAR--TVERLEDVAKQVTDTGRRA 62 (264)
T ss_dssp CTTHHHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTTCCE
T ss_pred CcHHHHHHHHHHHHCcCEEEEEeC--CHHHHHHHHHHHHhcCCcE
Confidence 578899999999999999888765 2233455666666665443
No 98
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=21.20 E-value=2.7e+02 Score=25.16 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh-CCEEecCHHHHh
Q 016868 202 CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET-ADIIKISEEEIS 259 (381)
Q Consensus 202 ~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~-~dvl~~N~~E~~ 259 (381)
+.+.+..+.+.+++.|+.++-.|- +. +.+..+.++ +|++++--.|+.
T Consensus 89 ~~e~~~~L~~~~~~~Gi~~~st~~-------d~----~svd~l~~~~v~~~KI~S~~~~ 136 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKGMIFISTLF-------SR----AAALRLQRMDIPAYKIGSGECN 136 (349)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC-------SH----HHHHHHHHHTCSCEEECGGGTT
T ss_pred CHHHHHHHHHHHHHhCCeEEEeeC-------CH----HHHHHHHhcCCCEEEECccccc
Confidence 456778888999999999998873 11 222233344 899987555543
No 99
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=21.16 E-value=86 Score=26.19 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=30.7
Q ss_pred CCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 92 PGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 92 ~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
.||-|..+|..|++.|.++.+++.- ....+.+.+.+++.+.++
T Consensus 14 s~gIG~~~a~~l~~~G~~v~~~~r~--~~~~~~~~~~~~~~~~~~ 56 (247)
T 3lyl_A 14 SRGIGFEVAHALASKGATVVGTATS--QASAEKFENSMKEKGFKA 56 (247)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHHHHHTTCCE
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCce
Confidence 4677999999999999998877652 234555666777665443
No 100
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=20.86 E-value=96 Score=26.70 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=31.3
Q ss_pred CCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 92 PGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 92 ~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
.||-|..+|..|++.|.+|.+++.- ....+.+.+.+++.|-+.
T Consensus 41 s~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~ 83 (276)
T 3r1i_A 41 STGIGKKVALAYAEAGAQVAVAARH--SDALQVVADEIAGVGGKA 83 (276)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESS--GGGGHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCeE
Confidence 4678999999999999999888762 234556667776665433
No 101
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=20.73 E-value=4.5e+02 Score=23.43 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=19.6
Q ss_pred ccCCChHHHHHHHHHHcCC-ceEEE
Q 016868 90 KAPGGAPANVAVGIARLGG-SSAFI 113 (381)
Q Consensus 90 ~~~GG~~~NvA~~la~LG~-~v~li 113 (381)
...||.|..+|.+|++.|+ +..++
T Consensus 42 vG~GGlG~~ia~~La~~Gvg~itlv 66 (346)
T 1y8q_A 42 VGLKGLGAEIAKNLILAGVKGLTML 66 (346)
T ss_dssp ECCSHHHHHHHHHHHHHTCSEEEEE
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 4589999999999999997 44444
No 102
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=20.65 E-value=1.1e+02 Score=26.65 Aligned_cols=43 Identities=12% Similarity=0.016 Sum_probs=30.0
Q ss_pred CCChHHHHHHHHHHcCCceEEEeecCC--ChHHHHHHHHHHHCCCC
Q 016868 92 PGGAPANVAVGIARLGGSSAFIGKVGA--DEFGYMLADILKENNVN 135 (381)
Q Consensus 92 ~GG~~~NvA~~la~LG~~v~li~~vG~--D~~g~~i~~~l~~~gi~ 135 (381)
-||.|+-+|+.|+..|.+|.++- ++. ....+...+.+++.|+.
T Consensus 91 NGGDGlv~AR~L~~~G~~V~V~~-~~~~~~~~~~~~~~~~~~~g~~ 135 (265)
T 2o8n_A 91 NGGDGLVCARHLKLFGYQPTIYY-PKRPNKPLFTGLVTQCQKMDIP 135 (265)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEC-CSCCSSHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCcEEEEE-eCCCCCHHHHHHHHHHHHcCCc
Confidence 47889999999999999988863 332 23344555667777764
No 103
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=20.25 E-value=86 Score=27.99 Aligned_cols=24 Identities=25% Similarity=0.245 Sum_probs=19.6
Q ss_pred CCChHHHHHHHHHHcCCceEEEee
Q 016868 92 PGGAPANVAVGIARLGGSSAFIGK 115 (381)
Q Consensus 92 ~GG~~~NvA~~la~LG~~v~li~~ 115 (381)
.|-.|.-+|..|++.|.+|.++-+
T Consensus 14 ~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 14 SGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCHHHHHHHHHHHhCCCEEEEEec
Confidence 455688999999999999998863
No 104
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.23 E-value=63 Score=26.50 Aligned_cols=24 Identities=8% Similarity=-0.050 Sum_probs=16.6
Q ss_pred CCChHHHHHHHHHHcCCceEEEee
Q 016868 92 PGGAPANVAVGIARLGGSSAFIGK 115 (381)
Q Consensus 92 ~GG~~~NvA~~la~LG~~v~li~~ 115 (381)
.|+.|.+++..|.+.|.+|..++.
T Consensus 13 tG~iG~~l~~~L~~~g~~V~~~~r 36 (227)
T 3dhn_A 13 SGFVGSALLNEALNRGFEVTAVVR 36 (227)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEECS
T ss_pred CchHHHHHHHHHHHCCCEEEEEEc
Confidence 456677777777777777666654
Done!