Query 016869
Match_columns 381
No_of_seqs 161 out of 1762
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 03:32:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016869.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016869hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06027 DUF914: Eukaryotic pr 100.0 2.6E-38 5.7E-43 296.2 32.0 298 17-351 7-312 (334)
2 KOG2766 Predicted membrane pro 100.0 1.3E-32 2.8E-37 239.0 4.8 294 18-352 13-307 (336)
3 PLN00411 nodulin MtN21 family 100.0 2.6E-28 5.6E-33 233.5 33.2 281 28-348 18-332 (358)
4 PRK11689 aromatic amino acid e 100.0 1.6E-26 3.5E-31 217.3 28.6 275 25-346 6-289 (295)
5 PRK11272 putative DMT superfam 100.0 5.8E-26 1.3E-30 213.2 32.0 272 28-347 13-288 (292)
6 PRK11453 O-acetylserine/cystei 100.0 5.7E-26 1.2E-30 214.0 30.6 281 27-347 8-290 (299)
7 TIGR00817 tpt Tpt phosphate/ph 100.0 3.6E-26 7.7E-31 215.8 27.3 271 37-347 16-296 (302)
8 PRK10532 threonine and homoser 99.9 6.7E-25 1.5E-29 206.1 30.1 274 22-348 11-285 (293)
9 TIGR00950 2A78 Carboxylate/Ami 99.9 6.8E-25 1.5E-29 202.5 28.9 255 36-339 2-259 (260)
10 PRK15430 putative chlorampheni 99.9 1.2E-24 2.6E-29 204.7 30.4 274 20-345 5-286 (296)
11 PTZ00343 triose or hexose phos 99.9 4.6E-24 1E-28 204.8 30.5 286 21-345 47-349 (350)
12 TIGR03340 phn_DUF6 phosphonate 99.9 1E-22 2.2E-27 190.2 24.4 272 25-341 3-280 (281)
13 COG0697 RhaT Permeases of the 99.9 1.8E-19 4E-24 168.2 31.2 274 24-345 8-288 (292)
14 PF08449 UAA: UAA transporter 99.9 1E-19 2.2E-24 171.7 27.5 276 41-349 18-302 (303)
15 TIGR00688 rarD rarD protein. T 99.9 2.5E-19 5.4E-24 165.1 28.3 242 23-319 2-255 (256)
16 KOG4510 Permease of the drug/m 99.8 1.3E-21 2.8E-26 171.8 0.5 271 33-346 47-327 (346)
17 KOG3912 Predicted integral mem 99.8 2.8E-18 6E-23 151.8 19.1 272 49-345 35-335 (372)
18 KOG2765 Predicted membrane pro 99.8 6.8E-18 1.5E-22 155.3 19.7 301 15-347 6-393 (416)
19 TIGR00776 RhaT RhaT L-rhamnose 99.8 8.8E-17 1.9E-21 150.6 25.7 273 24-344 2-288 (290)
20 COG5006 rhtA Threonine/homoser 99.8 3.2E-16 6.9E-21 137.2 27.1 256 41-348 30-286 (292)
21 KOG1441 Glucose-6-phosphate/ph 99.7 1.4E-17 3E-22 154.7 10.2 266 44-350 39-313 (316)
22 COG2962 RarD Predicted permeas 99.7 7.3E-15 1.6E-19 132.1 26.7 270 22-346 6-285 (293)
23 PF04142 Nuc_sug_transp: Nucle 99.7 1.5E-14 3.3E-19 131.4 21.6 219 80-335 14-244 (244)
24 KOG2234 Predicted UDP-galactos 99.6 2E-12 4.3E-17 119.7 32.2 231 82-349 91-327 (345)
25 KOG1580 UDP-galactose transpor 99.6 2E-14 4.4E-19 124.4 15.4 237 79-350 81-319 (337)
26 KOG1581 UDP-galactose transpor 99.6 9.7E-13 2.1E-17 118.6 22.9 264 50-348 48-317 (327)
27 KOG1443 Predicted integral mem 99.6 1.1E-12 2.4E-17 118.1 22.1 298 9-344 2-315 (349)
28 KOG1444 Nucleotide-sugar trans 99.4 1.8E-10 3.8E-15 105.4 23.4 273 38-351 27-307 (314)
29 KOG1582 UDP-galactose transpor 99.3 1.7E-10 3.6E-15 102.4 17.0 294 17-348 36-336 (367)
30 KOG1583 UDP-N-acetylglucosamin 99.3 1.7E-11 3.7E-16 108.9 9.5 282 36-348 15-318 (330)
31 COG2510 Predicted membrane pro 99.3 8.3E-11 1.8E-15 92.8 11.5 127 26-154 6-138 (140)
32 PF06800 Sugar_transport: Suga 99.2 1E-08 2.2E-13 93.2 23.1 244 52-341 11-268 (269)
33 KOG4314 Predicted carbohydrate 99.2 2.4E-10 5.2E-15 96.8 11.6 223 87-348 57-280 (290)
34 PF13536 EmrE: Multidrug resis 99.1 1.4E-09 3.1E-14 87.2 11.5 100 58-158 2-109 (113)
35 PF00892 EamA: EamA-like trans 99.1 7.9E-10 1.7E-14 89.7 9.6 118 34-154 2-125 (126)
36 KOG1442 GDP-fucose transporter 99.1 1E-10 2.3E-15 103.8 4.5 262 50-350 58-333 (347)
37 PF00892 EamA: EamA-like trans 99.0 1.2E-09 2.7E-14 88.5 9.7 125 180-343 1-125 (126)
38 COG2510 Predicted membrane pro 99.0 3.2E-09 7E-14 83.9 11.4 135 171-344 4-139 (140)
39 PF03151 TPT: Triose-phosphate 99.0 1.5E-08 3.2E-13 85.6 14.9 137 171-344 1-153 (153)
40 TIGR00803 nst UDP-galactose tr 98.9 2.4E-08 5.3E-13 89.9 14.2 197 109-342 4-222 (222)
41 COG5070 VRG4 Nucleotide-sugar 98.9 1.3E-07 2.8E-12 81.9 16.5 261 49-348 33-300 (309)
42 PF05653 Mg_trans_NIPA: Magnes 98.9 3.3E-07 7.2E-12 86.0 20.3 218 94-347 61-295 (300)
43 TIGR00950 2A78 Carboxylate/Ami 98.9 8.8E-08 1.9E-12 88.2 15.5 130 22-151 127-260 (260)
44 PRK15430 putative chlorampheni 98.6 1.1E-06 2.4E-11 82.7 15.5 138 167-343 5-144 (296)
45 PRK13499 rhamnose-proton sympo 98.6 5.8E-05 1.3E-09 71.6 25.1 108 80-187 70-191 (345)
46 TIGR00688 rarD rarD protein. T 98.6 2.8E-06 6.2E-11 78.1 15.7 138 170-343 2-141 (256)
47 TIGR03340 phn_DUF6 phosphonate 98.5 2.3E-06 4.9E-11 80.0 14.6 131 172-344 3-135 (281)
48 PRK11272 putative DMT superfam 98.5 3.6E-06 7.9E-11 79.0 15.4 132 23-157 150-287 (292)
49 PRK02971 4-amino-4-deoxy-L-ara 98.5 5.8E-06 1.3E-10 67.5 14.4 122 170-347 2-125 (129)
50 PLN00411 nodulin MtN21 family 98.5 4.6E-06 1E-10 80.3 15.7 135 22-157 188-330 (358)
51 PRK10532 threonine and homoser 98.5 7.3E-06 1.6E-10 77.0 16.3 133 22-157 147-283 (293)
52 KOG2922 Uncharacterized conser 98.4 2.6E-06 5.5E-11 78.3 10.6 224 90-347 70-309 (335)
53 PF03151 TPT: Triose-phosphate 98.4 1.7E-05 3.7E-10 66.7 15.0 128 25-152 2-150 (153)
54 PRK11689 aromatic amino acid e 98.3 2.2E-05 4.9E-10 73.8 15.2 129 24-157 157-289 (295)
55 PRK11453 O-acetylserine/cystei 98.3 5.4E-05 1.2E-09 71.4 16.7 136 22-157 142-289 (299)
56 TIGR00817 tpt Tpt phosphate/ph 98.2 2E-05 4.3E-10 74.4 13.4 135 23-157 145-295 (302)
57 PRK15051 4-amino-4-deoxy-L-ara 98.2 3.1E-05 6.7E-10 61.6 11.7 60 96-155 50-109 (111)
58 COG2962 RarD Predicted permeas 98.2 5.1E-05 1.1E-09 69.1 13.8 143 167-346 4-146 (293)
59 TIGR00776 RhaT RhaT L-rhamnose 98.1 4E-05 8.7E-10 71.9 13.1 129 22-155 151-288 (290)
60 COG0697 RhaT Permeases of the 98.1 0.00019 4.2E-09 66.6 16.6 133 21-156 152-288 (292)
61 PTZ00343 triose or hexose phos 98.1 0.00016 3.4E-09 69.7 15.9 134 21-154 192-347 (350)
62 PRK15051 4-amino-4-deoxy-L-ara 98.0 0.0002 4.3E-09 57.0 12.8 63 282-344 47-109 (111)
63 COG4975 GlcU Putative glucose 97.9 1.3E-06 2.9E-11 77.0 -1.2 269 24-343 3-284 (288)
64 PF13536 EmrE: Multidrug resis 97.9 8.4E-05 1.8E-09 59.4 9.3 65 282-347 45-109 (113)
65 PRK10452 multidrug efflux syst 97.6 0.00071 1.5E-08 54.3 9.7 64 284-347 42-106 (120)
66 PRK02971 4-amino-4-deoxy-L-ara 97.6 0.00041 8.8E-09 56.7 8.2 71 86-156 50-123 (129)
67 PF06027 DUF914: Eukaryotic pr 97.5 0.0025 5.4E-08 60.6 14.4 74 275-348 82-155 (334)
68 PRK10650 multidrug efflux syst 97.5 0.0033 7.2E-08 49.6 11.8 69 85-153 37-106 (109)
69 PF08449 UAA: UAA transporter 97.3 0.0082 1.8E-07 56.6 15.4 133 24-156 155-298 (303)
70 PRK10452 multidrug efflux syst 97.3 0.0036 7.7E-08 50.3 10.7 71 87-157 34-105 (120)
71 COG2076 EmrE Membrane transpor 97.3 0.0039 8.5E-08 48.5 10.2 66 90-155 37-103 (106)
72 PRK09541 emrE multidrug efflux 97.3 0.0031 6.7E-08 49.9 9.6 63 284-346 42-105 (110)
73 PRK11431 multidrug efflux syst 97.3 0.0057 1.2E-07 47.9 11.0 68 87-154 33-101 (105)
74 PF05653 Mg_trans_NIPA: Magnes 97.3 0.0018 4E-08 60.8 9.8 60 287-346 65-124 (300)
75 PRK09541 emrE multidrug efflux 97.2 0.0075 1.6E-07 47.7 10.9 64 93-156 40-104 (110)
76 PF06800 Sugar_transport: Suga 97.1 0.0058 1.3E-07 56.0 11.4 64 80-143 192-255 (269)
77 COG5006 rhtA Threonine/homoser 97.1 0.012 2.6E-07 52.7 12.1 104 51-154 174-281 (292)
78 PF04657 DUF606: Protein of un 96.9 0.028 6.2E-07 46.4 12.8 124 27-152 5-138 (138)
79 COG2076 EmrE Membrane transpor 96.9 0.0081 1.8E-07 46.7 8.8 63 284-346 42-105 (106)
80 PF04657 DUF606: Protein of un 96.9 0.053 1.1E-06 44.8 14.0 131 171-341 2-138 (138)
81 PRK11431 multidrug efflux syst 96.9 0.012 2.5E-07 46.2 9.4 61 285-345 42-103 (105)
82 PRK10650 multidrug efflux syst 96.9 0.025 5.4E-07 44.6 11.1 59 285-343 48-107 (109)
83 PRK13499 rhamnose-proton sympo 96.8 0.018 4E-07 54.8 11.7 145 167-347 4-156 (345)
84 PF07857 DUF1632: CEO family ( 96.6 0.011 2.4E-07 53.8 8.9 66 284-349 67-139 (254)
85 PF04142 Nuc_sug_transp: Nucle 96.5 0.025 5.4E-07 51.6 10.4 68 282-349 27-94 (244)
86 KOG4510 Permease of the drug/m 96.3 0.0044 9.5E-08 55.8 3.9 60 287-346 112-171 (346)
87 PF06379 RhaT: L-rhamnose-prot 96.2 1.2 2.5E-05 42.2 24.3 111 81-191 71-194 (344)
88 PF00893 Multi_Drug_Res: Small 96.1 0.045 9.8E-07 41.9 8.3 55 92-146 38-93 (93)
89 KOG1441 Glucose-6-phosphate/ph 96.0 0.028 6.2E-07 52.9 8.2 137 21-157 161-309 (316)
90 PF10639 UPF0546: Uncharacteri 95.9 0.016 3.4E-07 45.9 5.1 69 85-153 43-112 (113)
91 COG3238 Uncharacterized protei 95.7 0.36 7.9E-06 40.2 12.3 131 23-154 5-145 (150)
92 COG3238 Uncharacterized protei 95.5 0.66 1.4E-05 38.7 13.3 138 169-345 4-147 (150)
93 PF00893 Multi_Drug_Res: Small 95.4 0.067 1.5E-06 41.0 6.9 53 283-335 40-93 (93)
94 TIGR00803 nst UDP-galactose tr 95.1 0.22 4.7E-06 44.6 10.2 64 88-151 157-220 (222)
95 KOG1580 UDP-galactose transpor 94.0 0.61 1.3E-05 41.6 10.0 77 80-156 238-314 (337)
96 KOG1581 UDP-galactose transpor 93.8 0.55 1.2E-05 43.5 9.7 120 36-155 185-313 (327)
97 PF10639 UPF0546: Uncharacteri 93.8 0.24 5.3E-06 39.2 6.4 56 287-342 56-112 (113)
98 COG4975 GlcU Putative glucose 92.9 0.097 2.1E-06 46.9 3.2 66 282-347 69-139 (288)
99 KOG2765 Predicted membrane pro 92.9 0.41 8.9E-06 45.5 7.5 77 273-349 160-236 (416)
100 KOG1442 GDP-fucose transporter 92.4 0.13 2.9E-06 46.7 3.5 148 11-158 170-330 (347)
101 PRK02237 hypothetical protein; 91.8 3.8 8.2E-05 32.0 10.3 41 117-157 67-107 (109)
102 PF06379 RhaT: L-rhamnose-prot 91.8 1.1 2.5E-05 42.3 9.0 147 166-348 3-157 (344)
103 KOG2922 Uncharacterized conser 91.2 0.074 1.6E-06 49.5 0.5 45 305-349 97-141 (335)
104 PF02694 UPF0060: Uncharacteri 90.2 3.4 7.3E-05 32.1 8.6 45 113-157 61-105 (107)
105 KOG4314 Predicted carbohydrate 88.3 0.72 1.6E-05 40.0 4.2 63 285-347 66-128 (290)
106 KOG1443 Predicted integral mem 87.9 11 0.00024 35.2 11.9 132 22-153 163-313 (349)
107 KOG2234 Predicted UDP-galactos 85.4 2.6 5.6E-05 40.0 6.6 61 285-345 105-165 (345)
108 PRK02237 hypothetical protein; 82.9 11 0.00024 29.4 7.9 40 307-346 68-107 (109)
109 PF02694 UPF0060: Uncharacteri 81.6 10 0.00022 29.6 7.3 40 307-346 66-105 (107)
110 COG1742 Uncharacterized conser 80.0 7 0.00015 30.2 5.9 41 117-157 66-106 (109)
111 PF04342 DUF486: Protein of un 72.2 44 0.00096 26.0 8.5 33 310-342 74-106 (108)
112 KOG3912 Predicted integral mem 71.7 12 0.00026 34.5 6.2 60 287-346 101-160 (372)
113 PF07857 DUF1632: CEO family ( 71.3 44 0.00096 30.6 9.9 115 82-196 54-209 (254)
114 KOG1583 UDP-N-acetylglucosamin 70.6 49 0.0011 30.6 9.8 137 21-157 162-316 (330)
115 COG1742 Uncharacterized conser 67.6 35 0.00077 26.4 7.0 40 307-346 67-106 (109)
116 COG3169 Uncharacterized protei 65.7 26 0.00057 26.8 5.9 32 312-343 83-114 (116)
117 PF04342 DUF486: Protein of un 62.6 72 0.0016 24.9 8.2 30 124-153 77-106 (108)
118 KOG4831 Unnamed protein [Funct 62.4 13 0.00027 29.0 3.7 69 85-153 54-123 (125)
119 KOG1444 Nucleotide-sugar trans 62.4 79 0.0017 29.8 9.7 75 83-157 228-302 (314)
120 PF05977 MFS_3: Transmembrane 61.6 1.9E+02 0.0042 29.5 18.1 39 304-342 352-390 (524)
121 KOG1582 UDP-galactose transpor 58.6 89 0.0019 28.9 9.0 73 85-157 262-334 (367)
122 PF05297 Herpes_LMP1: Herpesvi 56.1 3.7 8.1E-05 37.6 -0.0 20 284-303 120-139 (381)
123 KOG2322 N-methyl-D-aspartate r 54.8 69 0.0015 28.8 7.6 37 166-202 191-228 (237)
124 KOG4831 Unnamed protein [Funct 53.6 23 0.00049 27.6 3.8 56 287-342 67-123 (125)
125 PF08507 COPI_assoc: COPI asso 53.4 18 0.0004 29.5 3.7 13 328-340 89-101 (136)
126 COG0670 Integral membrane prot 47.8 2.1E+02 0.0046 25.8 21.3 27 169-195 170-196 (233)
127 PF15471 TMEM171: Transmembran 45.2 22 0.00049 32.4 3.1 25 326-350 161-185 (319)
128 KOG2766 Predicted membrane pro 45.1 5.2 0.00011 36.3 -0.8 66 282-347 88-153 (336)
129 PF12811 BaxI_1: Bax inhibitor 43.6 2.7E+02 0.0059 25.8 19.7 109 109-217 146-260 (274)
130 COG5070 VRG4 Nucleotide-sugar 43.3 2.5E+02 0.0054 25.3 10.1 104 53-156 185-297 (309)
131 PF10754 DUF2569: Protein of u 42.3 1.1E+02 0.0024 25.4 6.8 29 166-194 117-145 (149)
132 PF10225 DUF2215: Uncharacteri 40.3 2.9E+02 0.0063 25.2 11.3 43 144-187 15-57 (249)
133 PF15345 TMEM51: Transmembrane 39.6 14 0.00029 33.1 0.9 24 330-353 67-90 (233)
134 cd06181 BI-1-like BAX inhibito 36.5 2.9E+02 0.0063 24.1 17.8 26 169-194 150-175 (212)
135 PRK13108 prolipoprotein diacyl 36.4 45 0.00099 33.4 4.1 24 324-347 254-277 (460)
136 PF09656 PGPGW: Putative trans 33.9 1.4E+02 0.0031 20.1 4.9 45 138-194 4-48 (53)
137 PF09586 YfhO: Bacterial membr 33.8 6.4E+02 0.014 27.3 15.4 141 54-219 93-233 (843)
138 PF05297 Herpes_LMP1: Herpesvi 33.2 14 0.00031 34.0 0.0 82 110-197 50-133 (381)
139 COG4858 Uncharacterized membra 30.3 2.6E+02 0.0056 24.3 7.0 20 25-44 102-121 (226)
140 PLN00028 nitrate transmembrane 29.5 4E+02 0.0087 26.5 9.8 13 329-341 417-429 (476)
141 PRK09412 anaerobic C4-dicarbox 28.4 6E+02 0.013 25.2 12.4 33 122-156 6-38 (433)
142 PF04550 Phage_holin_2: Phage 27.2 2.6E+02 0.0057 21.0 5.7 57 129-195 24-86 (89)
143 PF06570 DUF1129: Protein of u 24.7 4.7E+02 0.01 22.8 12.5 17 80-96 143-159 (206)
144 PF06570 DUF1129: Protein of u 24.5 4.8E+02 0.01 22.8 11.1 25 168-192 177-201 (206)
145 PF03547 Mem_trans: Membrane t 24.2 6.3E+02 0.014 24.1 11.9 11 312-322 110-120 (385)
146 PF12606 RELT: Tumour necrosis 22.3 86 0.0019 20.9 2.2 15 334-348 13-27 (50)
147 PF11023 DUF2614: Protein of u 22.2 2.8E+02 0.006 21.9 5.3 25 132-156 5-29 (114)
148 PRK06638 NADH:ubiquinone oxido 21.8 5.4E+02 0.012 22.4 13.0 34 313-346 133-168 (198)
149 COG4657 RnfA Predicted NADH:ub 21.4 3.6E+02 0.0078 22.9 6.1 65 125-196 87-158 (193)
150 TIGR01167 LPXTG_anchor LPXTG-m 20.9 1.3E+02 0.0029 17.6 2.8 20 324-343 10-29 (34)
151 COG3169 Uncharacterized protei 20.5 4.1E+02 0.0088 20.5 10.4 31 124-154 84-114 (116)
No 1
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=100.00 E-value=2.6e-38 Score=296.20 Aligned_cols=298 Identities=41% Similarity=0.761 Sum_probs=272.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc------chhhHHHHHHHH
Q 016869 17 MALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLG 90 (381)
Q Consensus 17 ~~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~------~~~~~~~~~~~g 90 (381)
.+|+.++.+++|++++++.++++.+++.+.+.+...|..++++.+....++..++..+|++. .+++||++++.+
T Consensus 7 ~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla 86 (334)
T PF06027_consen 7 FTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLA 86 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHH
Confidence 57888999999999999999999999999999999999999999999999888877766543 578899999999
Q ss_pred HHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccc--cCCCCCcc
Q 016869 91 FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEM--AGGGGSRP 168 (381)
Q Consensus 91 ~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~--~~~~~~~~ 168 (381)
+++..+|++.+.|++|++.++++++.++..+++++++++++|||+++.|++|+++++.|+.++...|... +...+++.
T Consensus 87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~ 166 (334)
T PF06027_consen 87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNP 166 (334)
T ss_pred HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999888641 22345677
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccc
Q 016869 169 LLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFI 248 (381)
Q Consensus 169 ~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (381)
..|++++++|+++||++++++|+..|+.+..+..++.++++.+++.++.
T Consensus 167 i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~------------------------------- 215 (334)
T PF06027_consen 167 ILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQL------------------------------- 215 (334)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH-------------------------------
Confidence 8999999999999999999999999999999999999999999998776
Q ss_pred cCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHH
Q 016869 249 PLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTY 328 (381)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~ 328 (381)
..+|.+++...+|+...+.++++...+.+..|.+....++..+|+...++.++..+++++++++++|+++++..
T Consensus 216 ------~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly 289 (334)
T PF06027_consen 216 ------AILERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY 289 (334)
T ss_pred ------HheehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH
Confidence 66778888888888888888899998899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhheecCCCCCCC
Q 016869 329 YLAFAAVLIGLIIYSTTAKDLLP 351 (381)
Q Consensus 329 ~iG~~lil~G~~l~~~~~~~~~~ 351 (381)
++|.++|++|.++|+..+++.++
T Consensus 290 ~~af~lIiiG~vvy~~~~~~~~~ 312 (334)
T PF06027_consen 290 ILAFALIIIGFVVYNLAESPEEE 312 (334)
T ss_pred HHHHHHHHHHhheEEccCCcccc
Confidence 99999999999999987765444
No 2
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.97 E-value=1.3e-32 Score=238.97 Aligned_cols=294 Identities=42% Similarity=0.828 Sum_probs=267.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHH
Q 016869 18 ALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN 97 (381)
Q Consensus 18 ~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 97 (381)
+||.++++.+|+++++|....+++++.+++.+...|..++|+.+...+++..|+..+|++-.+..|+.+++++++++-+|
T Consensus 13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla~~DVEaN 92 (336)
T KOG2766|consen 13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLAFVDVEAN 92 (336)
T ss_pred chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhheeEEeeccc
Confidence 78889999999999999999999999999999999999999999999999999999998878888999999999999999
Q ss_pred HHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc-ccCCCCCcchhHHHHHH
Q 016869 98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAGGGGSRPLLGDILVI 176 (381)
Q Consensus 98 ~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~-~~~~~~~~~~~G~ll~l 176 (381)
++...|++|++..+++.+.+-..+.+.+++|+++|.|.++.|+.|+.+|++|+.++...|-+ ++..++++...|+.+.+
T Consensus 93 y~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi 172 (336)
T KOG2766|consen 93 YFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVI 172 (336)
T ss_pred EEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999876 55666788899999999
Q ss_pred HHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccch
Q 016869 177 AGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRST 256 (381)
Q Consensus 177 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 256 (381)
+++-+||+.++..+.+.|+.|..+.+++.+++|++++.++. .
T Consensus 173 ~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ~--------------------------------------i 214 (336)
T KOG2766|consen 173 AGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQF--------------------------------------I 214 (336)
T ss_pred ecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHHH--------------------------------------h
Confidence 99999999999999999999999999999999999998773 4
Q ss_pred hccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHH
Q 016869 257 LELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVL 336 (381)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil 336 (381)
++.......+|++ ....++.++.++++.|.+....+|..+++...++.++.-+++++. ..||-+.+|...+.++.+.
T Consensus 215 ~~~~~~~tl~w~~-~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~ 291 (336)
T KOG2766|consen 215 FERHHVSTLHWDS-AIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIA 291 (336)
T ss_pred hhccceeeEeehH-HHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHH
Confidence 4566666677764 345566688899999999999999999999999999999999998 6678889999999999999
Q ss_pred hhhhheecCCCCCCCC
Q 016869 337 IGLIIYSTTAKDLLPI 352 (381)
Q Consensus 337 ~G~~l~~~~~~~~~~~ 352 (381)
.|.++|..+++++++.
T Consensus 292 ~GliiYs~re~~~~e~ 307 (336)
T KOG2766|consen 292 TGLIIYSTREKDEEEL 307 (336)
T ss_pred HhhEEeeccccCcHhh
Confidence 9999997666554443
No 3
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=2.6e-28 Score=233.48 Aligned_cols=281 Identities=14% Similarity=0.147 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc--c-c---hhhHHHHHHHHHHHHHHHHHHH
Q 016869 28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--R-L---QVSWYWYLLLGFVDVQGNFLFN 101 (381)
Q Consensus 28 ~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~-~---~~~~~~~~~~g~~~~~~~~~~~ 101 (381)
..++=.+.++...+++...+.+ .+|....++|+.+++++++++.+.+++ + . ++++.++.+.|+++...+.+++
T Consensus 18 ~~~~q~~~~~~~~~~k~a~~~G-~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~ 96 (358)
T PLN00411 18 MLATETSVVGISTLFKVATSKG-LNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGY 96 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-CCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444666777777777644 578889999999999999988765422 1 1 3445667777777744466779
Q ss_pred HHhhccchhhHHHhhcChhHHHHHHHHHH------hcccccHHHHHHHHHHHhhhHHhhcccccc---------------
Q 016869 102 KAFQFTSISSVTLLDCCAIPCAIVFTWVF------LGTRYSVWQLFGASLCVLGLGLMLLSDAEM--------------- 160 (381)
Q Consensus 102 ~al~~~~~~~~~il~~~~pi~~~lls~~~------l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~--------------- 160 (381)
.+++|++++.++++.++.|++++++++++ +|||++++|++|++++++|+.++...+...
T Consensus 97 ~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~ 176 (358)
T PLN00411 97 IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQL 176 (358)
T ss_pred HHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccc
Confidence 99999999999999999999999999999 699999999999999999999887532100
Q ss_pred ---cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCChh-HHHHHHHHHHHHHHHHHhhcccccccchhcccccccc
Q 016869 161 ---AGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRV-EVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTS 236 (381)
Q Consensus 161 ---~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 236 (381)
+.....+...|+++.++++++||+|++++|+..+++++. ....++...+.+...+..
T Consensus 177 ~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~------------------- 237 (358)
T PLN00411 177 SPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIG------------------- 237 (358)
T ss_pred ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHH-------------------
Confidence 000111124599999999999999999999988887654 334444433333322111
Q ss_pred cccccccccccccCCcccchhcccccc--ccccchh-hHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHH
Q 016869 237 LCGMIKFPFAFIPLPSFRSTLELKSLE--SVKWSTD-IILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAV 313 (381)
Q Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~ 313 (381)
...+..+.. ...++.. ..+.+.++. + ..+|.+|++++++.++..+++..+.+|++++
T Consensus 238 ------------------l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~ 297 (358)
T PLN00411 238 ------------------LVVEKNNPSVWIIHFDITLITIVTMAII-T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAV 297 (358)
T ss_pred ------------------HHHccCCcccceeccchHHHHHHHHHHH-H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHH
Confidence 111111100 0111211 123444543 3 3578999999999999999999999999999
Q ss_pred HHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869 314 ILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD 348 (381)
Q Consensus 314 i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~ 348 (381)
+++++++||++++.+++|+++|+.|+.+.++.++|
T Consensus 298 llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~ 332 (358)
T PLN00411 298 VMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKAN 332 (358)
T ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999998875544
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=1.6e-26 Score=217.30 Aligned_cols=275 Identities=14% Similarity=0.108 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHH-HHHHHHH
Q 016869 25 LLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKA 103 (381)
Q Consensus 25 ~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~a 103 (381)
.....+..++|+.+....|... +..+|..+.++|+.++++++.++. ++++.++.+++..+.+.+.... +.+.+.+
T Consensus 6 ~l~~l~a~~~Wg~~~~~~k~~~--~~~~P~~~~~~R~~~a~l~l~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a 81 (295)
T PRK11689 6 TLIGLIAILLWSTMVGLIRGVS--ESLGPVGGAAMIYSVSGLLLLLTV--GFPRLRQFPKRYLLAGGLLFVSYEICLALS 81 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH--ccCChHHHHHHHHHHHHHHHHHHc--cccccccccHHHHHHHhHHHHHHHHHHHHH
Confidence 3445556666776655566544 347999999999999999887653 2222333344455555555444 5555666
Q ss_pred hhc----cchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccccc--C--CCCCcchhHHHHH
Q 016869 104 FQF----TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMA--G--GGGSRPLLGDILV 175 (381)
Q Consensus 104 l~~----~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~--~--~~~~~~~~G~ll~ 175 (381)
+++ .+++.++++.++.|+++.+++++++|||+++++++|+.++++|+.++..++...+ + .+......|++++
T Consensus 82 ~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~ 161 (295)
T PRK11689 82 LGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLA 161 (295)
T ss_pred HHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHH
Confidence 654 5667788999999999999999999999999999999999999999886542100 0 0111235699999
Q ss_pred HHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccc
Q 016869 176 IAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRS 255 (381)
Q Consensus 176 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 255 (381)
++++++||.|+++.||..++.++..... ..+..... +. .
T Consensus 162 l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~----~~----------------------------------~ 200 (295)
T PRK11689 162 FIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALW----IK----------------------------------Y 200 (295)
T ss_pred HHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHH----HH----------------------------------H
Confidence 9999999999999999887776654321 12222211 00 0
Q ss_pred hhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHH
Q 016869 256 TLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAV 335 (381)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~li 335 (381)
..+.......++..+..+.+.+ .+....|.+|++++++.++..++...+.+|+++++++++++||++++.+++|+++|
T Consensus 201 ~~~~~~~~~~~~~~~~~l~~~~--~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI 278 (295)
T PRK11689 201 FLSPQPAMVFSLPAIIKLLLAA--AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMV 278 (295)
T ss_pred HHhcCccccCCHHHHHHHHHHH--HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 1111111112233333344444 34567889999999999999999999999999999999999999999999999999
Q ss_pred HhhhhheecCC
Q 016869 336 LIGLIIYSTTA 346 (381)
Q Consensus 336 l~G~~l~~~~~ 346 (381)
+.|+++....+
T Consensus 279 ~~gv~~~~~~~ 289 (295)
T PRK11689 279 TAGSLLCWLAT 289 (295)
T ss_pred HHhHHHHhhhH
Confidence 99998886644
No 5
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.96 E-value=5.8e-26 Score=213.24 Aligned_cols=272 Identities=13% Similarity=0.093 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc--cchhhHHHHHHHHHHHHHH-HHHHHHHh
Q 016869 28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--RLQVSWYWYLLLGFVDVQG-NFLFNKAF 104 (381)
Q Consensus 28 ~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~~~~~~~~~~~~g~~~~~~-~~~~~~al 104 (381)
-.+..++|+......|...+ ..+|...+++|+.+++++++++...+++ +.+++++.....|.+.... +.+++.+.
T Consensus 13 ~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 90 (292)
T PRK11272 13 LFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAE 90 (292)
T ss_pred HHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666665543 5789999999999999998887665443 2355666777778776543 66678888
Q ss_pred -hccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHH
Q 016869 105 -QFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFA 183 (381)
Q Consensus 105 -~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a 183 (381)
++++++.++++.++.|+++++++++ +|||+++++++|+.++++|+.++..++. .+....|++++++++++||
T Consensus 91 ~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~------~~~~~~G~l~~l~a~~~~a 163 (292)
T PRK11272 91 HQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN------LSGNPWGAILILIASASWA 163 (292)
T ss_pred HccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc------cccchHHHHHHHHHHHHHH
Confidence 9999999999999999999999985 6999999999999999999998865421 1234579999999999999
Q ss_pred HHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcccccc
Q 016869 184 MSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLE 263 (381)
Q Consensus 184 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 263 (381)
.|.+..||..++. +.....++...+........ ...+.....
T Consensus 164 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~ 205 (292)
T PRK11272 164 FGSVWSSRLPLPV-GMMAGAAEMLAAGVVLLIAS-------------------------------------LLSGERLTA 205 (292)
T ss_pred HHHHHHHhcCCCc-chHHHHHHHHHHHHHHHHHH-------------------------------------HHcCCcccc
Confidence 9999999975443 33344444444444432111 000100000
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhee
Q 016869 264 SVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS 343 (381)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~ 343 (381)
..+...+..+.+++... ....|.+|++++++.++..++.....+|+++++++++++||++++.+++|+.+++.|+++.+
T Consensus 206 ~~~~~~~~~i~~l~i~~-s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 206 LPTLSGFLALGYLAVFG-SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred cCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 11223344555666655 45667999999999999999999999999999999999999999999999999999999887
Q ss_pred cCCC
Q 016869 344 TTAK 347 (381)
Q Consensus 344 ~~~~ 347 (381)
..++
T Consensus 285 ~~~~ 288 (292)
T PRK11272 285 LGKY 288 (292)
T ss_pred HHHh
Confidence 6443
No 6
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.96 E-value=5.7e-26 Score=214.00 Aligned_cols=281 Identities=18% Similarity=0.207 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHH-HHHHHHhh
Q 016869 27 LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN-FLFNKAFQ 105 (381)
Q Consensus 27 ~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~al~ 105 (381)
...+.+++|+.+....+...+ ..+|....++|+.++++.++++..++ |.+++.....|++....+ .+++.+++
T Consensus 8 ~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~ 81 (299)
T PRK11453 8 LALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVARP----KVPLNLLLGYGLTISFGQFAFLFCAIN 81 (299)
T ss_pred HHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcCC----CCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667778888878876553 47899999999999887766544222 223444444555544443 34577888
Q ss_pred c-cchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHH
Q 016869 106 F-TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAM 184 (381)
Q Consensus 106 ~-~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~ 184 (381)
+ .+++.++++.++.|+++.+++++++|||+++++++++.++++|+.++..++. +..+.+..|++++++++++|++
T Consensus 82 ~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~----~~~~~~~~G~~l~l~aal~~a~ 157 (299)
T PRK11453 82 FGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL----NGQHVAMLGFMLTLAAAFSWAC 157 (299)
T ss_pred hcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC----CCcchhHHHHHHHHHHHHHHHH
Confidence 7 5778999999999999999999999999999999999999999999886432 1222335799999999999999
Q ss_pred HHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccc
Q 016869 185 SYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLES 264 (381)
Q Consensus 185 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 264 (381)
|.+++|+..++.+......... +...+..+ |+...... .. + ......+...
T Consensus 158 ~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~--------------------~~--~---~~~~~~~~~~ 208 (299)
T PRK11453 158 GNIFNKKIMSHSTRPAVMSLVV-WSALIPII---PFFVASLI--------------------LD--G---SATMIHSLVT 208 (299)
T ss_pred HHHHHHHHhcccCccchhHHHH-HHHHHHHH---HHHHHHHH--------------------hc--C---chhhhhhhcc
Confidence 9999999876554333332221 22222211 11000000 00 0 0000011112
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheec
Q 016869 265 VKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST 344 (381)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~ 344 (381)
.++..+..+++++... +...|.+|++++++.++..++....++|+++.+++++++||++++.+++|++++++|+++..+
T Consensus 209 ~~~~~~~~l~~l~i~~-t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 209 IDMTTILSLMYLAFVA-TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 2334455566777666 566779999999999999999999999999999999999999999999999999999998876
Q ss_pred CCC
Q 016869 345 TAK 347 (381)
Q Consensus 345 ~~~ 347 (381)
.++
T Consensus 288 ~~~ 290 (299)
T PRK11453 288 GLR 290 (299)
T ss_pred chh
Confidence 554
No 7
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.95 E-value=3.6e-26 Score=215.80 Aligned_cols=271 Identities=12% Similarity=0.109 Sum_probs=199.5
Q ss_pred HHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH---hhh-ccchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhH
Q 016869 37 LSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL---YRR-QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSV 112 (381)
Q Consensus 37 ~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~---~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~ 112 (381)
......+.+.+ +..+|...++.|+.++++.+..... .++ +..++++++++..|++......+.+.+++|++++.+
T Consensus 16 ~~~~~NK~~l~-~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~ 94 (302)
T TIGR00817 16 YFNIYNKKLLN-VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFT 94 (302)
T ss_pred HHHHHHHHHHh-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 33445555554 4678999999999988877655421 112 223567888999999987778888999999999999
Q ss_pred HHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 016869 113 TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFL 192 (381)
Q Consensus 113 ~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~ 192 (381)
+++.++.|+++++++++++|||+++++++|+.++++|+++....+ .+....|++++++++++|++|.++.||.
T Consensus 95 ~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-------~~~~~~G~~~~l~a~~~~a~~~v~~k~~ 167 (302)
T TIGR00817 95 HTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-------LSFNWAGFLSAMISNITFVSRNIFSKKA 167 (302)
T ss_pred HHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-------ccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998764332 2344679999999999999999999998
Q ss_pred hc--cCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcccccccc--ccc
Q 016869 193 VK--KIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESV--KWS 268 (381)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 268 (381)
.+ +.|+.+...++...+.+...... ..... ......+.... .+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~p~~-----------------------------~~~~~---~~~~~~~~~~~~~~~~ 215 (302)
T TIGR00817 168 MTIKSLDKTNLYAYISIMSLFLLSPPA-----------------------------FITEG---PPFLPHGFMQAISGVN 215 (302)
T ss_pred hccCCCCcccHHHHHHHHHHHHHHHHH-----------------------------HHHcc---hHHHHHHHHHhhcccC
Confidence 88 67888888887766666543221 00000 00000000000 001
Q ss_pred h-hhHH-HHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869 269 T-DIIL-SFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 269 ~-~~~~-~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~ 346 (381)
. ..+. .......+....+.+++.++++.++.++++....+|+++++++++++||++|+.+++|+++++.|+.++++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 216 VTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 1 1111 1111111233344566789999999999999999999999999999999999999999999999999998754
Q ss_pred C
Q 016869 347 K 347 (381)
Q Consensus 347 ~ 347 (381)
+
T Consensus 296 ~ 296 (302)
T TIGR00817 296 A 296 (302)
T ss_pred c
Confidence 3
No 8
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=6.7e-25 Score=206.07 Aligned_cols=274 Identities=15% Similarity=0.106 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-cchhhHHHHHHHHHHHHHHHHHH
Q 016869 22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-RLQVSWYWYLLLGFVDVQGNFLF 100 (381)
Q Consensus 22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 100 (381)
.+++.+..+..++++..+.+.+...+ ..+|....++|+++++++++++...+++ ..+++++.....|.+....+.++
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 88 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLF 88 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56667777777778877777776665 3789999999999999988876543332 23566777778888777778888
Q ss_pred HHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHH
Q 016869 101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAI 180 (381)
Q Consensus 101 ~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~ 180 (381)
++++++++++.+.++..+.|+++.+++ +||+++. .++.++++|+.++...+. +.++.+..|+++++++++
T Consensus 89 ~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~----~~~~~~~~G~ll~l~aa~ 158 (293)
T PRK10532 89 YLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQ----DVSHVDLTGAALALGAGA 158 (293)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCC----CcccCChHHHHHHHHHHH
Confidence 999999999999999999999998876 3665544 456778999988764321 122334679999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccc
Q 016869 181 FFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELK 260 (381)
Q Consensus 181 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 260 (381)
+||.|.+..||..++.++... .+..+.+.++.. |+ ...+..
T Consensus 159 ~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~----~~----------------------------------~~~~~~ 199 (293)
T PRK10532 159 CWAIYILSGQRAGAEHGPATV-AIGSLIAALIFV----PI----------------------------------GALQAG 199 (293)
T ss_pred HHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHH----HH----------------------------------HHHccC
Confidence 999999999998877776554 333334433322 21 111111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhh
Q 016869 261 SLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLI 340 (381)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~ 340 (381)
. ...++..+....++++.. +...|.++++++++.++..+++..+++|+++.+++++++||++++.+++|+++|+.|.+
T Consensus 200 ~-~~~~~~~~~~~l~lgv~~-t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~ 277 (293)
T PRK10532 200 E-ALWHWSILPLGLAVAILS-TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASM 277 (293)
T ss_pred c-ccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 0 011222233345666655 56677999999999999999999999999999999999999999999999999999999
Q ss_pred heecCCCC
Q 016869 341 IYSTTAKD 348 (381)
Q Consensus 341 l~~~~~~~ 348 (381)
.+....+|
T Consensus 278 ~~~~~~~~ 285 (293)
T PRK10532 278 GSTLTIRR 285 (293)
T ss_pred HHHhcCCC
Confidence 99766543
No 9
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=6.8e-25 Score=202.50 Aligned_cols=255 Identities=17% Similarity=0.082 Sum_probs=193.8
Q ss_pred HHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHH-HHHHHHHhhccchhhHHH
Q 016869 36 ALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKAFQFTSISSVTL 114 (381)
Q Consensus 36 ~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~i 114 (381)
+.++...+...+ +..+|....+.|.+.+.+.+.+...++ +.++++++....|.++... +.+++.|+++++++.+++
T Consensus 2 g~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i 78 (260)
T TIGR00950 2 GTTGVVIGQYLE-GQVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL 78 (260)
T ss_pred cchHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence 344455555443 456888889999888888877765444 3456667777777777655 677799999999999999
Q ss_pred hhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 016869 115 LDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVK 194 (381)
Q Consensus 115 l~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~ 194 (381)
+.++.|+++++++++++|||+++++++|+.++++|+.++..++ ..+.+..|++++++++++|+.+.+..|+..+
T Consensus 79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~------~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~ 152 (260)
T TIGR00950 79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG------NLSINPAGLLLGLGSGISFALGTVLYKRLVK 152 (260)
T ss_pred HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC------cccccHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 9999999999999999999999999999999999999987553 2234568999999999999999999999887
Q ss_pred cCChh--HHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhhH
Q 016869 195 KIDRV--EVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDII 272 (381)
Q Consensus 195 ~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (381)
+.++. ....+....+.++..... ....+.. ..+...+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~--------------------------------------~~~~~~~-~~~~~~~~~ 193 (260)
T TIGR00950 153 KEGPELLQFTGWVLLLGALLLLPFA--------------------------------------WFLGPNP-QALSLQWGA 193 (260)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHH--------------------------------------HhcCCCC-CcchHHHHH
Confidence 76643 333334444444432111 1111111 112222333
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhh
Q 016869 273 LSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGL 339 (381)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~ 339 (381)
+.+.+... ...+|.++++++++.++..++....++|+++.+++++++||++++.+++|.++++.|+
T Consensus 194 ~~~~~~~~-~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 194 LLYLGLIG-TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHH-HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 44555544 5567799999999999999999999999999999999999999999999999999886
No 10
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.94 E-value=1.2e-24 Score=204.71 Aligned_cols=274 Identities=16% Similarity=0.099 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc--cc---hhhHHH--HHHHHHH
Q 016869 20 RTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--RL---QVSWYW--YLLLGFV 92 (381)
Q Consensus 20 ~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~~---~~~~~~--~~~~g~~ 92 (381)
++.++.....+.+++|+..+...+... ..+|....++|.+++.++++++...+++ +. .++++. ....+.+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~~---~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLIY---YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV 81 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence 446788888888888988888887542 3789999999999998877776543321 10 111222 2334545
Q ss_pred HHH-HHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhH
Q 016869 93 DVQ-GNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLG 171 (381)
Q Consensus 93 ~~~-~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G 171 (381)
... .+.++++|+++++++.++++.++.|+++++++++++|||+++++|.|+.++++|+.++..++. +.
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------~~---- 150 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------SL---- 150 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------Cc----
Confidence 444 477789999999999999999999999999999999999999999999999999999875421 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCC
Q 016869 172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLP 251 (381)
Q Consensus 172 ~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 251 (381)
.+++++++++||.|.+..|+..++... . ......+...+......++ ..
T Consensus 151 ~~~~l~aa~~~a~~~i~~r~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~-------------------------~~---- 199 (296)
T PRK15430 151 PIIALGLAFSFAFYGLVRKKIAVEAQT-G-MLIETMWLLPVAAIYLFAI-------------------------AD---- 199 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCCCch-h-HHHHHHHHHHHHHHHHHHH-------------------------cc----
Confidence 146888999999999999986432221 1 1111112222211111000 00
Q ss_pred cccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHH
Q 016869 252 SFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLA 331 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG 331 (381)
.. .......++..+..+...+ . +....|.+|++++++.++..++...+.+|+++.+++++++||++++.+++|
T Consensus 200 ---~~--~~~~~~~~~~~~~~~~~~g-~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G 272 (296)
T PRK15430 200 ---SS--TSHMGQNPMSLNLLLIAAG-I-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVT 272 (296)
T ss_pred ---CC--cccccCCcHHHHHHHHHHH-H-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 00 0000011111111222223 2 355677999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhheecC
Q 016869 332 FAAVLIGLIIYSTT 345 (381)
Q Consensus 332 ~~lil~G~~l~~~~ 345 (381)
+++|+.|+.+....
T Consensus 273 ~~lI~~~~~v~~~~ 286 (296)
T PRK15430 273 FAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHHHH
Confidence 99998887777653
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.94 E-value=4.6e-24 Score=204.76 Aligned_cols=286 Identities=15% Similarity=0.098 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHh--h-hcc---chhhHHHHHHHHHHHH
Q 016869 21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY--R-RQR---LQVSWYWYLLLGFVDV 94 (381)
Q Consensus 21 ~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~-~~~---~~~~~~~~~~~g~~~~ 94 (381)
.++........-.+.......++.+.+ ....|..++.+|+++++++...+... + +++ .+++++..+..|+++.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 455555555554445455555565553 33339999999999997765444322 1 122 2356788899999998
Q ss_pred HHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHH
Q 016869 95 QGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDIL 174 (381)
Q Consensus 95 ~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll 174 (381)
..+...+.|+++++++.++++.++.|+++++++++++|||++++++.++++++.|+.+....+. +.+..|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-------~~~~~G~~~ 198 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-------HFTWLAFWC 198 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-------hhHHHHHHH
Confidence 8877788999999999999999999999999999999999999999999999999999876532 345689999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCC-------hhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccc
Q 016869 175 VIAGAIFFAMSYVGEEFLVKKID-------RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAF 247 (381)
Q Consensus 175 ~l~a~~~~a~~~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 247 (381)
+++|++++|+++++.|+..++.+ ..+...+....+.++.. |+....
T Consensus 199 ~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l----p~~~~~----------------------- 251 (350)
T PTZ00343 199 AMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISL----PLVLFF----------------------- 251 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHH----HHHHHH-----------------------
Confidence 99999999999999999877543 33333333444444432 331100
Q ss_pred ccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHH----hhhhcchhhHHHHHhHHHHHHHHHHHHHhhccc
Q 016869 248 IPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVP----FVLKLSGATMLILSVLTSDMWAVILRIFCYHQQ 323 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~ 323 (381)
+.+......+.. ...........+.+ .... ....|.+++ .++++.++.+.++...++|+++++.+++++||+
T Consensus 252 -e~~~~~~~~~~~-~~~~~~~~~~~~l~-~i~~-s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~ 327 (350)
T PTZ00343 252 -EGKKWVPVWTNY-TANMTNYTKGIIIF-KIFF-SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQ 327 (350)
T ss_pred -hhHHHHHHHHHh-hhcccccchHHHHH-HHHH-HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCC
Confidence 000000000000 00111111111222 2222 344556666 599999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHhhhhheecC
Q 016869 324 VNWTYYLAFAAVLIGLIIYSTT 345 (381)
Q Consensus 324 ~t~~~~iG~~lil~G~~l~~~~ 345 (381)
+|+.+++|.++++.|+++|+..
T Consensus 328 lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 328 VTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred CchHhHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999864
No 12
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.91 E-value=1e-22 Score=190.23 Aligned_cols=272 Identities=16% Similarity=0.128 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhh--h---ccchhhHHHHHHHHH-HHHHHHH
Q 016869 25 LLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR--R---QRLQVSWYWYLLLGF-VDVQGNF 98 (381)
Q Consensus 25 ~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~---~~~~~~~~~~~~~g~-~~~~~~~ 98 (381)
+.+..+.+++++.....+|...+. .++. .+.+....++.+.|+...+ + +..+++++.....+. .......
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 455666777777777777655543 2333 4666667777777766543 1 222333444444444 4455577
Q ss_pred HHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHH
Q 016869 99 LFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAG 178 (381)
Q Consensus 99 ~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a 178 (381)
+.+.++++.+++.++++.++.|+++.+++++++|||+++++|+|+.+++.|+.++..++. ...+..|+.+++++
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~------~~~~~~g~~~~l~a 152 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF------AQHRRKAYAWALAA 152 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc------cccchhHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999876532 12334688899999
Q ss_pred HHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhc
Q 016869 179 AIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLE 258 (381)
Q Consensus 179 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (381)
+++|+.|.+..|+..++.++.........++...... |+... . ...+
T Consensus 153 al~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------------------~--------~~~~ 199 (281)
T TIGR03340 153 ALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGW---PFLLL----------------------Y--------LKRH 199 (281)
T ss_pred HHHHHHhhhhccccccchhcccccHHHHHHHHHHHHH---HHHHH----------------------H--------HHHh
Confidence 9999999998887654444321111111122222100 11000 0 0001
Q ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhh
Q 016869 259 LKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIG 338 (381)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G 338 (381)
.......++ ......+.+... ....|.+|++++++.++..++...+.+|+++.+++++++||++++.+++|+++++.|
T Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~-s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~G 277 (281)
T TIGR03340 200 GRSMFPYAR-QILPSATLGGLM-IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAG 277 (281)
T ss_pred ccchhhhHH-HHHHHHHHHHHH-HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHh
Confidence 111000111 112223444333 566779999999999988888888889999999999999999999999999999999
Q ss_pred hhh
Q 016869 339 LII 341 (381)
Q Consensus 339 ~~l 341 (381)
+.+
T Consensus 278 v~l 280 (281)
T TIGR03340 278 LVV 280 (281)
T ss_pred HHh
Confidence 875
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.88 E-value=1.8e-19 Score=168.24 Aligned_cols=274 Identities=23% Similarity=0.304 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhh---ccchhhHHHHHHHHHHHHHH-HHH
Q 016869 24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---QRLQVSWYWYLLLGFVDVQG-NFL 99 (381)
Q Consensus 24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~~-~~~ 99 (381)
......+.++.++......+...+. ..++....+.|.....+...+....++ ++.+.++++..+.+.+.... ..+
T Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (292)
T COG0697 8 GLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLL 86 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3344444445555555454444432 345566667798888887544433322 22223334555555555555 777
Q ss_pred HHHHhhccchhhHHHhhcChhHHHHHHHH-HHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCc-chhHHHHHHH
Q 016869 100 FNKAFQFTSISSVTLLDCCAIPCAIVFTW-VFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSR-PLLGDILVIA 177 (381)
Q Consensus 100 ~~~al~~~~~~~~~il~~~~pi~~~lls~-~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~-~~~G~ll~l~ 177 (381)
++.++++++++.++++.++.|+++.++++ +++|||++++++.++.++++|+.++..++. .++. ...|++++++
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~-----~~~~~~~~g~~~~l~ 161 (292)
T COG0697 87 LFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG-----GGGILSLLGLLLALA 161 (292)
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC-----cchhHHHHHHHHHHH
Confidence 79999999999999999999999999997 777999999999999999999999998753 1111 5789999999
Q ss_pred HHHHHHHHHHHHHHhhccCChhHHHH-HHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccch
Q 016869 178 GAIFFAMSYVGEEFLVKKIDRVEVVC-MIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRST 256 (381)
Q Consensus 178 a~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 256 (381)
+++++|++.+..|+.. +.+...... +... ....... |. .
T Consensus 162 a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~---~~-----------------------------------~ 201 (292)
T COG0697 162 AALLWALYTALVKRLS-RLGPVTLALLLQLL-LALLLLL---LF-----------------------------------F 201 (292)
T ss_pred HHHHHHHHHHHHHHhc-CCChHHHHHHHHHH-HHHHHHH---HH-----------------------------------H
Confidence 9999999999999987 555544444 3222 1111110 10 0
Q ss_pred hccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHH
Q 016869 257 LELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVL 336 (381)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil 336 (381)
....+ .......+....+.++.. ....|.++.+++++.++...+.....+|+++.+++++++||+++..+++|+.+++
T Consensus 202 ~~~~~-~~~~~~~~~~~~~~g~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~ 279 (292)
T COG0697 202 LSGFG-APILSRAWLLLLYLGVFS-TGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVV 279 (292)
T ss_pred hcccc-ccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 01111 111222333444555554 3357799999999999999998889999999999999999999999999999999
Q ss_pred hhhhheecC
Q 016869 337 IGLIIYSTT 345 (381)
Q Consensus 337 ~G~~l~~~~ 345 (381)
.|+.+.+..
T Consensus 280 ~g~~l~~~~ 288 (292)
T COG0697 280 LGVLLASLR 288 (292)
T ss_pred HHHHHHhcc
Confidence 999998876
No 14
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.87 E-value=1e-19 Score=171.75 Aligned_cols=276 Identities=17% Similarity=0.210 Sum_probs=211.8
Q ss_pred HHHHHhhcCCC--chhHHHHHHHHHHHHHHHHHHHhh--hccchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhh
Q 016869 41 TTAVITDLGVD--APITQSVLCYLSLALAYGGILLYR--RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLD 116 (381)
Q Consensus 41 ~~~~l~~~~~~--~p~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~ 116 (381)
..-.+.+.... .|..+++..+....+.-.+..... +++.+.+++.+...+++....+.+.+.|+.|+|.....+.+
T Consensus 18 ~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~k 97 (303)
T PF08449_consen 18 LQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFK 97 (303)
T ss_pred HHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHh
Confidence 33344444433 489999999888887766554433 34557888999999999999999999999999999999999
Q ss_pred cChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCC---CcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 016869 117 CCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGG---SRPLLGDILVIAGAIFFAMSYVGEEFLV 193 (381)
Q Consensus 117 ~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~---~~~~~G~ll~l~a~~~~a~~~v~~~~~~ 193 (381)
++.|+.+++++.+++|||.+++|++++++..+|+++....|...+.... .....|+++.+++.++.|...+++||..
T Consensus 98 s~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~ 177 (303)
T PF08449_consen 98 SSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLF 177 (303)
T ss_pred hhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887653111111 1123499999999999999999999998
Q ss_pred ccC--ChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhh
Q 016869 194 KKI--DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDI 271 (381)
Q Consensus 194 ~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (381)
+++ ++.+.+.+..+++..+.......+. ++ ...+..++.. .....
T Consensus 178 ~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-----~~--------------------------~~~~~~~f~~--~~p~~ 224 (303)
T PF08449_consen 178 KKYGKSPWELMFYTNLFSLPFLLILLFLLP-----TG--------------------------EFRSAIRFIS--AHPSV 224 (303)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-----hh--------------------------HhhHHHHHHH--HhHHH
Confidence 766 4567888888888887654431100 00 0111111111 11223
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869 272 ILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL 349 (381)
Q Consensus 272 ~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~ 349 (381)
+...+....+...++..++..+++.++...++....+.+.+++++.+++|+++++.+|+|.++++.|..+++..++|+
T Consensus 225 ~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 225 LLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 334455555566677788889999999999999999999999999999999999999999999999999999877664
No 15
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.87 E-value=2.5e-19 Score=165.14 Aligned_cols=242 Identities=15% Similarity=0.045 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc------cc----hhh-HHHHHHHHH
Q 016869 23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ------RL----QVS-WYWYLLLGF 91 (381)
Q Consensus 23 ~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~------~~----~~~-~~~~~~~g~ 91 (381)
+++....+.+++|+..+.+.+.+. ..+|....++|.++++++++++...+++ +. +++ +......|.
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~~---~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLLK---PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 356667777788888888888632 3799999999999999887765532211 11 111 223455666
Q ss_pred HHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhH
Q 016869 92 VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLG 171 (381)
Q Consensus 92 ~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G 171 (381)
+....+.+++.|++++++++++++.++.|+++++++++++|||+++++|+++.++++|++++..++. +..
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-------~~~--- 148 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-------SLP--- 148 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-------Cch---
Confidence 6566678889999999999999999999999999999999999999999999999999998865421 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCC
Q 016869 172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLP 251 (381)
Q Consensus 172 ~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 251 (381)
.++++++++||.|.+..|+..++ +..+.... .+..........
T Consensus 149 -~~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~---------------------------------- 191 (256)
T TIGR00688 149 -WEALVLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYL---------------------------------- 191 (256)
T ss_pred -HHHHHHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHH----------------------------------
Confidence 46789999999999999987543 32221111 111111111000
Q ss_pred cccchhcccccccccc-chhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHh
Q 016869 252 SFRSTLELKSLESVKW-STDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFC 319 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~ 319 (381)
...+.......+. ..+.++...+. . ....|.++++++++.++..++...+.+|+++++++.++
T Consensus 192 ---~~~~~~~~~~~~~~~~~~~l~~~g~-~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 192 ---LQTDFATVQQTNPFPIWLLLVLAGL-I-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred ---HHhccCcccccCchhHHHHHHHHHH-H-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 0000000011111 13444445554 3 45688999999999999999999999999999999764
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.82 E-value=1.3e-21 Score=171.77 Aligned_cols=271 Identities=15% Similarity=0.268 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccc---hhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 016869 33 FSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRL---QVSWYWYLLLGFVDVQGNFLFNKAFQFTSI 109 (381)
Q Consensus 33 ~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~al~~~~~ 109 (381)
+++..+.+.++.... .+|..+...|++.--++..|..+++++.. +...+++++.|+.+..+.++.|+|+.|.+.
T Consensus 47 ~ff~~~~vv~t~~~e---~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~msl 123 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLE---NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYMSL 123 (346)
T ss_pred HHHhhHHHhhhhhhc---cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhcch
Confidence 444455555544443 46888888886665555555444443321 233345677899999999999999999999
Q ss_pred hhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc-c-----cCCCC-CcchhHHHHHHHHHHHH
Q 016869 110 SSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-M-----AGGGG-SRPLLGDILVIAGAIFF 182 (381)
Q Consensus 110 ~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~-~-----~~~~~-~~~~~G~ll~l~a~~~~ 182 (381)
+++.++..++|+++.+++|+++|||.++.+.++..+.+.|++++..++.. + ++..+ ..+..|...++.++++.
T Consensus 124 aDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~ 203 (346)
T KOG4510|consen 124 ADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFG 203 (346)
T ss_pred hheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhh
Confidence 99999999999999999999999999999999999999999999887653 1 11111 34567889999999999
Q ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccc
Q 016869 183 AMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSL 262 (381)
Q Consensus 183 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 262 (381)
|.-.++.|+..|+.|......+....+.+.+.+...- + +.+
T Consensus 204 asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~-----------------------i-----------g~~----- 244 (346)
T KOG4510|consen 204 ASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCAS-----------------------I-----------GAV----- 244 (346)
T ss_pred hhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhh-----------------------c-----------cce-----
Confidence 9999999999999988766666666666665433200 0 101
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhe
Q 016869 263 ESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY 342 (381)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~ 342 (381)
+.+.....+.+++-.+...+.+|.+...+++.--+.-.++..++..+++.+|.+++|||.||++.|.|+++|+.+.+..
T Consensus 245 -~lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 245 -QLPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred -ecCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 1222334444444445556788899999999987887888888888999999999999999999999999998887776
Q ss_pred ecCC
Q 016869 343 STTA 346 (381)
Q Consensus 343 ~~~~ 346 (381)
...+
T Consensus 324 a~~k 327 (346)
T KOG4510|consen 324 ALKK 327 (346)
T ss_pred HHHH
Confidence 6543
No 17
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.81 E-value=2.8e-18 Score=151.77 Aligned_cols=272 Identities=24% Similarity=0.298 Sum_probs=205.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHhhhc---------------cc--hhhHHHHHHHHHHHHHHHHHHHHHhhccchhh
Q 016869 49 GVDAPITQSVLCYLSLALAYGGILLYRRQ---------------RL--QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISS 111 (381)
Q Consensus 49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~---------------~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~ 111 (381)
++.+|+.++..-++.-.+.+..+.+.|++ +. +......+..++++..+..+.|.++.+++++.
T Consensus 35 gfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASs 114 (372)
T KOG3912|consen 35 GFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASS 114 (372)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHH
Confidence 47789999888777665655554444432 01 22234556689999999999999999999999
Q ss_pred HHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccccc---CCCCCcchhHHHHHHHHHHHHHHHHHH
Q 016869 112 VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMA---GGGGSRPLLGDILVIAGAIFFAMSYVG 188 (381)
Q Consensus 112 ~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~---~~~~~~~~~G~ll~l~a~~~~a~~~v~ 188 (381)
.++++....+|+.+++..+++++++.+||+|+.....|++.+...|.+.. .+..++...|+++.+.+-+.-|...++
T Consensus 115 fQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~ 194 (372)
T KOG3912|consen 115 FQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVC 194 (372)
T ss_pred HHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988776522 122356679999999999999999999
Q ss_pred HHHhhccC--ChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCC-c----ccchhcc--
Q 016869 189 EEFLVKKI--DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLP-S----FRSTLEL-- 259 (381)
Q Consensus 189 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~----~~~~~~~-- 259 (381)
.+|..++. ++.+..++.+++|..+...+. .|++++|.+ + +++.+|.
T Consensus 195 Eek~l~~~nV~pl~avg~eGlfG~v~~slL~-------------------------i~m~yi~~~~sfS~~~~g~~eD~~ 249 (372)
T KOG3912|consen 195 EEKQLKKSNVAPLQAVGWEGLFGLVILSLLA-------------------------IPMYYIPSGDSFSCNPRGVLEDWG 249 (372)
T ss_pred HHhhhhhccCCHHHHhhhhhhHHHHHHHHHH-------------------------HHHhheecCCcCcCCCCcchhhHH
Confidence 99998876 567999999999987765544 455555544 2 1233333
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhh
Q 016869 260 KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGL 339 (381)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~ 339 (381)
+.+.+.+......+...+...+...++..-....|..++++-.+.-.....+--+++..+.+|.+...|+.|+++.+.|+
T Consensus 250 ~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi 329 (372)
T KOG3912|consen 250 DAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGI 329 (372)
T ss_pred HHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333443444445556666655555555555566678877777777776777778888889999999999999999999
Q ss_pred hheecC
Q 016869 340 IIYSTT 345 (381)
Q Consensus 340 ~l~~~~ 345 (381)
++|+--
T Consensus 330 ~lY~~i 335 (372)
T KOG3912|consen 330 ILYNQI 335 (372)
T ss_pred HHHHHH
Confidence 999853
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.79 E-value=6.8e-18 Score=155.32 Aligned_cols=301 Identities=18% Similarity=0.209 Sum_probs=217.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCchhHHHHHHHHHHHHHHHHHH-------H--hh--hc-----
Q 016869 15 SQMALRTLYLLLLGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGIL-------L--YR--RQ----- 77 (381)
Q Consensus 15 ~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~-~~~~~p~~~~~~r~~~~~l~l~~~~-------~--~~--~~----- 77 (381)
..+++|...|+++-.++..+|-.++..++.+.. +.+..|+..++..-....+-+.++. . .| +.
T Consensus 6 ~~~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~ 85 (416)
T KOG2765|consen 6 FTKRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIM 85 (416)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhh
Confidence 345566678888888888999988888875554 3455799888777543333333322 1 11 00
Q ss_pred --------------------------------------------------------cch------------hhHHHHHHH
Q 016869 78 --------------------------------------------------------RLQ------------VSWYWYLLL 89 (381)
Q Consensus 78 --------------------------------------------------------~~~------------~~~~~~~~~ 89 (381)
+.+ +..+.-+..
T Consensus 86 ~e~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~f 165 (416)
T KOG2765|consen 86 EEADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFF 165 (416)
T ss_pred hhhhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHH
Confidence 000 111233555
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc-ccCCCCCcc
Q 016869 90 GFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAGGGGSRP 168 (381)
Q Consensus 90 g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~-~~~~~~~~~ 168 (381)
..+.+.+|++++.|+.+++++..+++.+++-+||..++.++..||+++.+.+++.+.+.|++++...|.+ .+.......
T Consensus 166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~ 245 (416)
T KOG2765|consen 166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRP 245 (416)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccch
Confidence 6667778999999999999999999999999999999999999999999999999999999999988754 222344556
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccC-ChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccc
Q 016869 169 LLGDILVIAGAIFFAMSYVGEEFLVKKI-DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAF 247 (381)
Q Consensus 169 ~~G~ll~l~a~~~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 247 (381)
..|+++++++++.||+|.++.||...+. +...+..+.++.|.+-..+...|++++
T Consensus 246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL------------------------ 301 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL------------------------ 301 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH------------------------
Confidence 8999999999999999999999988777 355555555544444333323222222
Q ss_pred ccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHH
Q 016869 248 IPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWT 327 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~ 327 (381)
..+..+.++-.+......+++.+... .+..-.+|.++.-..++.++.+.+.++...+++.+.++-|.++++.
T Consensus 302 -------~~~~~e~F~lP~~~q~~~vv~~~lig-tvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~ 373 (416)
T KOG2765|consen 302 -------DFFGEERFELPSSTQFSLVVFNNLIG-TVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL 373 (416)
T ss_pred -------HHhccCcccCCCCceeEeeeHhhHHH-HHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH
Confidence 22222222222222222344555444 5555589999999999999999888888899999999999999999
Q ss_pred HHHHHHHHHhhhhheecCCC
Q 016869 328 YYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 328 ~~iG~~lil~G~~l~~~~~~ 347 (381)
+++|.+.|..|.+..+...+
T Consensus 374 ~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 374 YIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHHHHHHHHHHHhheecccc
Confidence 99999999999999998654
No 19
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.78 E-value=8.8e-17 Score=150.56 Aligned_cols=273 Identities=14% Similarity=0.087 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH-hhhcc--chhhHHHHHHHHHHHHHHHHHH
Q 016869 24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL-YRRQR--LQVSWYWYLLLGFVDVQGNFLF 100 (381)
Q Consensus 24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~--~~~~~~~~~~~g~~~~~~~~~~ 100 (381)
++.+..+.+++|+..+...+.+. + .++.+.. |..++.+++..+.. .++++ .++.+..-++.|.....+|.++
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g-~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~ 76 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--G-GPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQ 76 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--C-CHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhH
Confidence 34566677777888887777655 3 3443332 66666666554433 23221 1233344455566666778999
Q ss_pred HHHhhccchhhHHHhhc-ChhHHHHHHHHHHhcccccHHH----HHHHHHHHhhhHHhhcccccccCCCC-CcchhHHHH
Q 016869 101 NKAFQFTSISSVTLLDC-CAIPCAIVFTWVFLGTRYSVWQ----LFGASLCVLGLGLMLLSDAEMAGGGG-SRPLLGDIL 174 (381)
Q Consensus 101 ~~al~~~~~~~~~il~~-~~pi~~~lls~~~l~er~~~~~----~~gi~l~~~Gv~l~~~~~~~~~~~~~-~~~~~G~ll 174 (381)
+.+.++.+++.+..+.+ +.+++..+++.+++|||.++++ ++|+.++++|+.++...+....++.+ .+...|.++
T Consensus 77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~ 156 (290)
T TIGR00776 77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILL 156 (290)
T ss_pred HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHH
Confidence 99999999999988888 8889999999999999999999 99999999999988665431111000 223679999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCccc
Q 016869 175 VIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFR 254 (381)
Q Consensus 175 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 254 (381)
+++++++|+.|.+..|+. +.++.+....+. ++.++......+.
T Consensus 157 ~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~-~g~~~~~~~~~~~---------------------------------- 199 (290)
T TIGR00776 157 LLMSTIGYLVYVVVAKAF--GVDGLSVLLPQA-IGMVIGGIIFNLG---------------------------------- 199 (290)
T ss_pred HHHHHHHHHHHHHHHHHc--CCCcceehhHHH-HHHHHHHHHHHHH----------------------------------
Confidence 999999999999999976 467766654444 3333332221010
Q ss_pred chhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhh-cchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHH----
Q 016869 255 STLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK-LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY---- 329 (381)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~---- 329 (381)
. .+.++. . ....+...+ .+......|.+|..+.+ +.++..++.....+|+.+.+++++++||+.++.|+
T Consensus 200 ~-~~~~~~---~-~~~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~ 273 (290)
T TIGR00776 200 H-ILAKPL---K-KYAILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAIS 273 (290)
T ss_pred H-hcccch---H-HHHHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhH
Confidence 0 000111 1 111122222 22224677788999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhheec
Q 016869 330 LAFAAVLIGLIIYST 344 (381)
Q Consensus 330 iG~~lil~G~~l~~~ 344 (381)
+|+++++.|..+...
T Consensus 274 iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 274 VGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999887654
No 20
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.78 E-value=3.2e-16 Score=137.20 Aligned_cols=256 Identities=17% Similarity=0.116 Sum_probs=188.9
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH-hhhccchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcCh
Q 016869 41 TTAVITDLGVDAPITQSVLCYLSLALAYGGILL-YRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCA 119 (381)
Q Consensus 41 ~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~ 119 (381)
+++-+. ....|...+.+|..+++++++++.. +|++..+++|+.....|......|.++|.++..+|.+.+.-+-++.
T Consensus 30 ~Ak~LF--P~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~G 107 (292)
T COG5006 30 FAKSLF--PLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTG 107 (292)
T ss_pred HHHHHc--cccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhcc
Confidence 444444 2356888999999999999988665 4445567889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 016869 120 IPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRV 199 (381)
Q Consensus 120 pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~ 199 (381)
|+.+++++ .+| .+..+.+.+++.|+.++...+. +.++.+..|..+++.++.||+.|.+..||..+..+..
T Consensus 108 PL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~----~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~ 177 (292)
T COG5006 108 PLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQ----SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGT 177 (292)
T ss_pred HHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccC----CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCc
Confidence 98876655 333 3455667778888888876643 4567788999999999999999999999987655544
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhhHHHHHHHH
Q 016869 200 EVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNA 279 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (381)
+.... +..+..+..+|+ +..+... .-..++.....+.+++
T Consensus 178 ~g~a~----gm~vAaviv~Pi----------------------------------g~~~ag~-~l~~p~ll~laLgvav- 217 (292)
T COG5006 178 AGVAV----GMLVAALIVLPI----------------------------------GAAQAGP-ALFSPSLLPLALGVAV- 217 (292)
T ss_pred hHHHH----HHHHHHHHHhhh----------------------------------hhhhcch-hhcChHHHHHHHHHHH-
Confidence 44443 333333333354 2222211 0112222222222332
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869 280 ASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD 348 (381)
Q Consensus 280 ~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~ 348 (381)
.++..=|.+-..++++.+...-+..+.++|.++.+.+++++||.+|+.||+|++.|+.+..-.....+|
T Consensus 218 lSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~ 286 (292)
T COG5006 218 LSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK 286 (292)
T ss_pred HhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence 235567799999999999999999999999999999999999999999999999999887655554443
No 21
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.73 E-value=1.4e-17 Score=154.68 Aligned_cols=266 Identities=16% Similarity=0.276 Sum_probs=204.0
Q ss_pred HHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc---c--chhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcC
Q 016869 44 VITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ---R--LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC 118 (381)
Q Consensus 44 ~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~---~--~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~ 118 (381)
.+.+.++..|...+..+...+.+.+......+-. + .+.+++..+.+|++...+.++.+.|+.+.+++..+++..+
T Consensus 39 il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~ 118 (316)
T KOG1441|consen 39 ILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKAL 118 (316)
T ss_pred hhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhh
Confidence 3444488899999999777766666544333221 1 3467899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcc---
Q 016869 119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKK--- 195 (381)
Q Consensus 119 ~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~--- 195 (381)
.|+++.++++++.+|+.++..++.+.....|+.+....|. +.+..|.+.++++.+..++.+++.|+..++
T Consensus 119 ~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~-------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~ 191 (316)
T KOG1441|consen 119 MPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL-------SFNLFGFISAMISNLAFALRNILSKKLLTSKGE 191 (316)
T ss_pred cchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-------cccHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999999999999988753 678899999999999999999999998852
Q ss_pred -CChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhhHHH
Q 016869 196 -IDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILS 274 (381)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (381)
.|+.+.+.++.-.+..... .|+ .....+. .. . .....+|....+..
T Consensus 192 ~~~~~~ll~y~ap~s~~~Ll---~P~-------------------------~~~~~~~---~~-~-~~~~~~~~~~~~~~ 238 (316)
T KOG1441|consen 192 SLNSMNLLYYTAPISLIFLL---IPF-------------------------LDYVEGN---KF-V-GFLTAPWFVTFLIL 238 (316)
T ss_pred ccCchHHHHHhhhHHHHHHh---cch-------------------------Hhhhccc---ce-e-eeeccccchhhHHH
Confidence 3555555555544444432 132 2221111 00 0 00111333222222
Q ss_pred HHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCCC
Q 016869 275 FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL 350 (381)
Q Consensus 275 ~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~~ 350 (381)
... ..+.++.|...+..+.+.+|.+-++.....-++.+..++++|+|+.|+.+..|.++.++|+.+|++.+++++
T Consensus 239 ~~~-sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 239 LLN-SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred HHH-HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 222 255778889999999999999999999988888999999999999999999999999999999998776543
No 22
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.72 E-value=7.3e-15 Score=132.09 Aligned_cols=270 Identities=16% Similarity=0.072 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHh--hhcc---chhhHHHH--HHHHHHHH
Q 016869 22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY--RRQR---LQVSWYWY--LLLGFVDV 94 (381)
Q Consensus 22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~~~---~~~~~~~~--~~~g~~~~ 94 (381)
.+|+..+....++|+..-...+.+.. .++..+...|.+-+..+++..... +++. ..++.+.+ ...+....
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~---~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEP---LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 46778888888888888878887775 466778888876555555443332 2221 12222222 33333344
Q ss_pred HHHHH-HHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHH
Q 016869 95 QGNFL-FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDI 173 (381)
Q Consensus 95 ~~~~~-~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~l 173 (381)
..|+. +.+|..+..+-++++=+...|++.++++++++|||+++.||+++.++.+||........ +.+ .
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g-------~lp----w 151 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG-------SLP----W 151 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-------CCc----H
Confidence 44555 47899999999999999999999999999999999999999999999999999988732 222 4
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcc
Q 016869 174 LVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSF 253 (381)
Q Consensus 174 l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 253 (381)
.++.=++.|+.|...-|+. +.|+.+-.....++-.....+..
T Consensus 152 val~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl------------------------------------ 193 (293)
T COG2962 152 VALALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYL------------------------------------ 193 (293)
T ss_pred HHHHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHH------------------------------------
Confidence 5677789999999976665 44566555555544444443222
Q ss_pred cchhcc-ccccc-cccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHH
Q 016869 254 RSTLEL-KSLES-VKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLA 331 (381)
Q Consensus 254 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG 331 (381)
...+. .++.. .+++. +.+....+..+..--.++..+-|+.+-.+.++..+++|..-.+++++++||+++..+...
T Consensus 194 -~~l~~~~~~~~~~~~~~--~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~ 270 (293)
T COG2962 194 -LFLADSGQFLQQNANSL--WLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVT 270 (293)
T ss_pred -HHHhcCchhhhcCCchH--HHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 11111 11111 12222 233222222233343677888889999999999999999999999999999999999999
Q ss_pred HHHHHhhhhheecCC
Q 016869 332 FAAVLIGLIIYSTTA 346 (381)
Q Consensus 332 ~~lil~G~~l~~~~~ 346 (381)
.+.|-+|+.++..+.
T Consensus 271 F~~IW~aL~l~~~d~ 285 (293)
T COG2962 271 FAFIWLALALFSIDG 285 (293)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
No 23
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.67 E-value=1.5e-14 Score=131.39 Aligned_cols=219 Identities=20% Similarity=0.185 Sum_probs=163.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc
Q 016869 80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE 159 (381)
Q Consensus 80 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~ 159 (381)
+++..++.+.++++...|.+.+.++.+.+++..+++.++..++|++++++++|+|++++||+++.+.++|+.+...++..
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999998876543
Q ss_pred cc---CC-------CCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHhhcccccccch
Q 016869 160 MA---GG-------GGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR--VEVVCMIGVYGLLVSVVQLYPFLLGDMIT 227 (381)
Q Consensus 160 ~~---~~-------~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 227 (381)
.+ .. ...+...|.++.++++++.|+..++.||..|+.+. ........++|.++..+.. ..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~-~~------- 165 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLAL-LL------- 165 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH-hc-------
Confidence 10 01 12345689999999999999999999999998742 3444445667777664332 00
Q ss_pred hcccccccccccccccccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHH
Q 016869 228 FTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLT 307 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~ 307 (381)
... +...+.+-+. .++.+.|.. +......+ .+....+|+.+...-.+....
T Consensus 166 ---------------------~~~--~~~~~~g~f~--G~~~~~~~~---i~~~a~gG-llva~v~KyadnI~K~fa~a~ 216 (244)
T PF04142_consen 166 ---------------------SDG--SAISESGFFH--GYSWWVWIV---IFLQAIGG-LLVAFVLKYADNIVKGFATAV 216 (244)
T ss_pred ---------------------ccc--cccccCCchh--hcchHHHHH---HHHHHHhh-HHHHHHHHHHhHHHHHHHHHH
Confidence 000 0111111122 233333322 22222233 556678999999988888888
Q ss_pred HHHHHHHHHHHhhcccccHHHHHHHHHH
Q 016869 308 SDMWAVILRIFCYHQQVNWTYYLAFAAV 335 (381)
Q Consensus 308 ~pv~a~i~~~~~~~e~~t~~~~iG~~li 335 (381)
..+.+.+.++++||.+++....+|..+|
T Consensus 217 siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 217 SIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 8899999999999999999999998754
No 24
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.64 E-value=2e-12 Score=119.70 Aligned_cols=231 Identities=16% Similarity=0.157 Sum_probs=170.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc--
Q 016869 82 SWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-- 159 (381)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~-- 159 (381)
+..+..+.+++...-|.+.+.++.+.+++..++..++..+.|++++.++++||++++||.++++..+|+.++..+...
T Consensus 91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~ 170 (345)
T KOG2234|consen 91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT 170 (345)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 345667778888888888899999999999999999999999999999999999999999999999999999833221
Q ss_pred --ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHhhcccccccchhccccccc
Q 016869 160 --MAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR--VEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYT 235 (381)
Q Consensus 160 --~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 235 (381)
.+.....+...|....+.++.+.+...++.||..|+.+. +.......++|.++..+..
T Consensus 171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~------------------ 232 (345)
T KOG2234|consen 171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTI------------------ 232 (345)
T ss_pred CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH------------------
Confidence 112234556799999999999999999999999987643 3333334556777765332
Q ss_pred ccccccccccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHH
Q 016869 236 SLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVIL 315 (381)
Q Consensus 236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~ 315 (381)
..-+.+ ...+.+-+ ..|+...|...+..+. .+ .+....+|+.+...-........+++.+.
T Consensus 233 -----------~~~d~~--~i~~~gff--~G~s~~vw~vVl~~a~---gG-Llvs~v~KyADnIlK~f~~s~aiilt~v~ 293 (345)
T KOG2234|consen 233 -----------LLQDGE--AINEYGFF--YGYSSIVWLVVLLNAV---GG-LLVSLVMKYADNILKGFSTSVAIILTTVA 293 (345)
T ss_pred -----------hhcccc--ccccCCcc--ccccHHHHHHHHHHhc---cc-hhHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 000000 11111111 2344444444433322 22 45566788888887777777777999999
Q ss_pred HHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869 316 RIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL 349 (381)
Q Consensus 316 ~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~ 349 (381)
++.++|.++|....+|..+|+.++.+|...++++
T Consensus 294 S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 294 SIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 9999999999999999999999999999655543
No 25
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.61 E-value=2e-14 Score=124.40 Aligned_cols=237 Identities=12% Similarity=0.123 Sum_probs=187.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccc
Q 016869 79 LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDA 158 (381)
Q Consensus 79 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~ 158 (381)
.+.+.+.+...++...+++...|.|++|++.....+=.+..|+-+++++.++.+++.+|++..+++.+++|+++....+.
T Consensus 81 D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~ 160 (337)
T KOG1580|consen 81 DNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN 160 (337)
T ss_pred cCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc
Confidence 35667788999999999999999999999998888889999999999999999999999999999999999999998754
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHhhcccccccchhcccccccc
Q 016869 159 EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR--VEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTS 236 (381)
Q Consensus 159 ~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 236 (381)
............|.++.+++-..-++....+++.++.+.+ ..++....+|+.+.....+ .+++
T Consensus 161 Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~-------lfTG-------- 225 (337)
T KOG1580|consen 161 KVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGL-------LFTG-------- 225 (337)
T ss_pred ccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhh-------eehh--------
Confidence 3222233445689999999999999999999998887644 5777788889998875332 0000
Q ss_pred cccccccccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHH
Q 016869 237 LCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILR 316 (381)
Q Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~ 316 (381)
..+|.-.+.+-.+ ..+.-..+++++...++++.+..+...++...++...+...++++.+
T Consensus 226 ------------------ElweF~yF~~RhP--~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~S 285 (337)
T KOG1580|consen 226 ------------------ELWEFFYFVQRHP--YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILIS 285 (337)
T ss_pred ------------------hHHHHHHHHHhcc--HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHH
Confidence 2222212211111 11222455566677788999999999999999999999999999999
Q ss_pred HHhhcccccHHHHHHHHHHHhhhhheecCCCCCC
Q 016869 317 IFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL 350 (381)
Q Consensus 317 ~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~~ 350 (381)
+++++++++.+||+|..++..++..-....|+.+
T Consensus 286 Vllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~ 319 (337)
T KOG1580|consen 286 VLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAP 319 (337)
T ss_pred HHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCc
Confidence 9999999999999999999999887776655544
No 26
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.57 E-value=9.7e-13 Score=118.58 Aligned_cols=264 Identities=14% Similarity=0.202 Sum_probs=205.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhh--ccchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHH
Q 016869 50 VDAPITQSVLCYLSLALAYGGILLYRR--QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127 (381)
Q Consensus 50 ~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls 127 (381)
+.+|.++.+.+-+.+.+.-..+.-+++ ...+.+|+.+...++.+....++.+.|++|++-....+-.++..+-++++.
T Consensus 48 F~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg 127 (327)
T KOG1581|consen 48 FEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG 127 (327)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence 567888888888777766543333322 234688999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccHHHHHHHHHHHhhhHHhhccccc--ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccC--ChhHHHH
Q 016869 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE--MAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVC 203 (381)
Q Consensus 128 ~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~--~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~ 203 (381)
.++.|+|.+..+.+...+...|+.+....+.. .+..+..+...|..+....-++-+..+..++++.++. +..+++.
T Consensus 128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~ 207 (327)
T KOG1581|consen 128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF 207 (327)
T ss_pred HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence 99999999999999999999999988765442 2223345678999999999999999999999998865 5678888
Q ss_pred HHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhhHHHHHHHHHHHH
Q 016869 204 MIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSF 283 (381)
Q Consensus 204 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (381)
...+++.+.+....++= . ...+.-++-..+++. +.-......+..
T Consensus 208 ~vNLf~~i~~~~~li~q------------------------------g---~~~~av~F~~~hp~~--~~Di~l~s~~ga 252 (327)
T KOG1581|consen 208 GVNLFSAILNGTYLILQ------------------------------G---HLLPAVSFIKEHPDV--AFDILLYSTCGA 252 (327)
T ss_pred HHHHHHHHHHHHhhhcC------------------------------C---CCchHHHHHHcChhH--HHHHHHHHHhhh
Confidence 88889998876443110 0 111111121112222 222344445566
Q ss_pred HHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869 284 MFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD 348 (381)
Q Consensus 284 ~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~ 348 (381)
.+|.+.++.+++-|+.+-...+.+.-++++.++.+.+|++.++.||.|..++..|+.+-..-+++
T Consensus 253 vGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 253 VGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 78899999999999999999999999999999999999999999999999999998777665555
No 27
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.56 E-value=1.1e-12 Score=118.15 Aligned_cols=298 Identities=15% Similarity=0.189 Sum_probs=191.1
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH-hhhc----cchhhH
Q 016869 9 SCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL-YRRQ----RLQVSW 83 (381)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~----~~~~~~ 83 (381)
..|..++|...+++..+.+-.+--.++-+..+..+...+ ++.-|...+..+.+.-.++-..... ++++ +....|
T Consensus 2 ~~~~~~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~-~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw 80 (349)
T KOG1443|consen 2 GRWALDNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTK-NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSW 80 (349)
T ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcH
Confidence 357778888887766555543332222222222333333 5777999888887654444332222 2211 223344
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc
Q 016869 84 ----YWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE 159 (381)
Q Consensus 84 ----~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~ 159 (381)
++....|+....-..+.|+++.|++.+.+++..+++++|+.+++.+|--||+++.-..-+.++.+|+.+....+.
T Consensus 81 ~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT- 159 (349)
T KOG1443|consen 81 RDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST- 159 (349)
T ss_pred HHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-
Confidence 444466666666677779999999999999999999999999999999999999999999999999999988743
Q ss_pred ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCC-----hhHHHHHHHHHHHHHHHHHhhcccccccchhcccccc
Q 016869 160 MAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID-----RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLY 234 (381)
Q Consensus 160 ~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 234 (381)
+.+..|..+..++.++.++...+.++..++.+ +.+......-+-.+... |. .++.+
T Consensus 160 ------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll----~~---~l~fE------ 220 (349)
T KOG1443|consen 160 ------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLL----PL---SLLFE------ 220 (349)
T ss_pred ------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHH----HH---HHHHc------
Confidence 57789999999999999999999998877654 33333222211111111 11 00000
Q ss_pred cccccccccccccccCCcccchhcccccccccc--chhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHH
Q 016869 235 TSLCGMIKFPFAFIPLPSFRSTLELKSLESVKW--STDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWA 312 (381)
Q Consensus 235 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a 312 (381)
| . . ...+...+...+. ..+....+.+.+...+..-..-+..+.+.+..+.++.....-+-+
T Consensus 221 ----G----------~-~--~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~t 283 (349)
T KOG1443|consen 221 ----G----------L-H--LITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCT 283 (349)
T ss_pred ----c----------c-c--cchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHH
Confidence 0 0 0 0001111111111 111111122222223322234445566688888888888887999
Q ss_pred HHHHHHhhcccccHHHHHHHHHHHhhhhheec
Q 016869 313 VILRIFCYHQQVNWTYYLAFAAVLIGLIIYST 344 (381)
Q Consensus 313 ~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~ 344 (381)
.+++..+.+|+++...|+|..++..|+.++..
T Consensus 284 l~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 284 LLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999944
No 28
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.39 E-value=1.8e-10 Score=105.38 Aligned_cols=273 Identities=13% Similarity=0.089 Sum_probs=181.4
Q ss_pred HHHHHH-HHhhcCCCchhHHHHHHHHHHHHHHHHHHHhh---hc-cchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhH
Q 016869 38 SSFTTA-VITDLGVDAPITQSVLCYLSLALAYGGILLYR---RQ-RLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSV 112 (381)
Q Consensus 38 ~~~~~~-~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~---~~-~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~ 112 (381)
+.+..+ .+...++..-+....++.+.+.+.+...-..+ .+ -.++..++++...++..+..+....+++|.++...
T Consensus 27 m~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~ 106 (314)
T KOG1444|consen 27 MTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMF 106 (314)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHH
Confidence 344444 33433333333334477776666654332211 11 12445577788888888888888899999999999
Q ss_pred HHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 016869 113 TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFL 192 (381)
Q Consensus 113 ~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~ 192 (381)
+++....|+++++....++|.|+++..|.++..+..|......+|. ..+..|+.+++...++-+.+.+..|+.
T Consensus 107 tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~-------sf~~~gY~w~~~n~~~~a~~~v~~kk~ 179 (314)
T KOG1444|consen 107 TVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL-------SFNLRGYSWALANCLTTAAFVVYVKKS 179 (314)
T ss_pred HHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc-------eecchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998888764 444569999999999999999999998
Q ss_pred hccCC--hhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccc-h
Q 016869 193 VKKID--RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWS-T 269 (381)
Q Consensus 193 ~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 269 (381)
.+..+ ..+...+..+.+.....+...+. +.++.-....-+|. .
T Consensus 180 vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~----------------------------------ge~~~l~~~~~~~~~~ 225 (314)
T KOG1444|consen 180 VDSANLNKFGLVFYNNLLSLPPLLILSFIT----------------------------------GELDALSLNFDNWSDS 225 (314)
T ss_pred hccccccceeEEeehhHHHHHHHHHHHHHh----------------------------------cchHHHHhhcccccch
Confidence 76543 34455555545555443222000 11110011111121 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869 270 DIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL 349 (381)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~ 349 (381)
..+..+...+.+.+.-.....+..+..+++...+........+.+-..+++|++.++...+|..+-++|.++|+..+.++
T Consensus 226 ~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~ 305 (314)
T KOG1444|consen 226 SVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK 305 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence 11222222222233333445566777777777766666656667777777888999999999999999999999877554
Q ss_pred CC
Q 016869 350 LP 351 (381)
Q Consensus 350 ~~ 351 (381)
++
T Consensus 306 k~ 307 (314)
T KOG1444|consen 306 KK 307 (314)
T ss_pred cc
Confidence 43
No 29
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.7e-10 Score=102.37 Aligned_cols=294 Identities=17% Similarity=0.153 Sum_probs=204.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCC-chhHHHHHHHHHHHHHHHHHHH-hhhccchhhHHHHHHHHHH
Q 016869 17 MALRTLYLLLLGQLVSFSLALSSFTTAVIT--DLGVD-APITQSVLCYLSLALAYGGILL-YRRQRLQVSWYWYLLLGFV 92 (381)
Q Consensus 17 ~~~~~~~~~~~~~l~a~~~~~~~~~~~~l~--~~~~~-~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~ 92 (381)
.++++|.-+++.....++.=......+.+. +.++. ..+.+++.+++..+.+-+..+. ++.++...+|+-+..++.+
T Consensus 36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~ 115 (367)
T KOG1582|consen 36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFL 115 (367)
T ss_pred ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhh
Confidence 345667666666555444444444444332 23443 3467788888776654433221 2333446899999999999
Q ss_pred HHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHH
Q 016869 93 DVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGD 172 (381)
Q Consensus 93 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ 172 (381)
....+.+.+.++.|.+...-.+..++..+-+++.+.++=++|..+....+..+..+|+++....|. ....+.+..|.
T Consensus 116 t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs---~~sPNF~~~Gv 192 (367)
T KOG1582|consen 116 TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS---QTSPNFNLIGV 192 (367)
T ss_pred hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc---ccCCCcceeeH
Confidence 988888889999999998888889999999999999999999999999999999999999999875 24556778999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccC
Q 016869 173 ILVIAGAIFFAMSYVGEEFLVKKIDR--VEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPL 250 (381)
Q Consensus 173 ll~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (381)
.+.-.|-++-|.-..++++..+..+. .++..+....|..+..+ |..+ ++
T Consensus 193 ~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~---~mvl----Tg---------------------- 243 (367)
T KOG1582|consen 193 MMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFA---PMVL----TG---------------------- 243 (367)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHH---HHHh----cc----------------------
Confidence 99999999999999999998876643 34443333333333221 1100 00
Q ss_pred Ccccchhcc-ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHH
Q 016869 251 PSFRSTLEL-KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY 329 (381)
Q Consensus 251 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~ 329 (381)
..+.. ....+.++... ........+...+.......++..++.++........-++++++.++|..++|.+..
T Consensus 244 ----e~f~a~~fcaehp~~ty--Gy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~ 317 (367)
T KOG1582|consen 244 ----ELFSAWTFCAEHPVRTY--GYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYV 317 (367)
T ss_pred ----cchhhhHHHHhCcHhHH--HHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHh
Confidence 11111 11122333222 222222233444555666678888999988888888899999999999999999999
Q ss_pred HHHHHHHhhhhheecCCCC
Q 016869 330 LAFAAVLIGLIIYSTTAKD 348 (381)
Q Consensus 330 iG~~lil~G~~l~~~~~~~ 348 (381)
-|..+|+.|+++-...+.+
T Consensus 318 ~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 318 WSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred hhhHHHHHHHHhhcccCCC
Confidence 9999999999998887743
No 30
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.28 E-value=1.7e-11 Score=108.94 Aligned_cols=282 Identities=14% Similarity=0.160 Sum_probs=184.5
Q ss_pred HHHHHHH-HHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhh--hccchhhHHHHHHHHHHHHHHHHHHHHHhhc-cchhh
Q 016869 36 ALSSFTT-AVITDLGVDAPITQSVLCYLSLALAYGGILLYR--RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQF-TSISS 111 (381)
Q Consensus 36 ~~~~~~~-~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~ 111 (381)
+++++.. -.+.+.+...--.++|..++..+.-=++.. .+ ..+.+.+.+.+.+.-...+..|..-|+++++ ++...
T Consensus 15 Ccsnvv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~-skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~Pl 93 (330)
T KOG1583|consen 15 CCSNVVFLELLVRNEPGSGNLITFAQFLFIATEGLIFT-SKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPL 93 (330)
T ss_pred hhchHHHHHHHHHhCCCCeeehHHHHHHHHHHhceeee-ccccccCCCCchhhhheehheeeeeeeeccceeeecccceE
Confidence 3334444 455555544556778888776655433221 11 1234677777777666666678888899987 45578
Q ss_pred HHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc---c------cCCC---CCcchhHHHHHHHHH
Q 016869 112 VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE---M------AGGG---GSRPLLGDILVIAGA 179 (381)
Q Consensus 112 ~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~---~------~~~~---~~~~~~G~ll~l~a~ 179 (381)
..+.++..++.+++++++++|+|.+.+|+.++.+..+|+++....... . ..+. ......|..+...+-
T Consensus 94 HiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al 173 (330)
T KOG1583|consen 94 HIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFAL 173 (330)
T ss_pred EEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999988764321 1 0001 112247888888899
Q ss_pred HHHHHHHHHHHHhhccC--ChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchh
Q 016869 180 IFFAMSYVGEEFLVKKI--DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTL 257 (381)
Q Consensus 180 ~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 257 (381)
+..|...+++|...+++ ++.|.+.+.-+.+....... ...+++.|. ...
T Consensus 174 ~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~------~~div~~~~-----------------------~~~ 224 (330)
T KOG1583|consen 174 LLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM------GDDIVSHWR-----------------------LAF 224 (330)
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh------cchHHHHHH-----------------------HHh
Confidence 99999999999887776 55677766443322222111 111111110 000
Q ss_pred ccccc--c--ccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHH
Q 016869 258 ELKSL--E--SVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFA 333 (381)
Q Consensus 258 ~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~ 333 (381)
..++. + ... -...|...+....++..+--..+..-...++.+.++...+...++.+++...|++++|++.|+|.+
T Consensus 225 ~se~~~~p~~g~~-vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~ 303 (330)
T KOG1583|consen 225 KSESYLIPLLGFK-VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAA 303 (330)
T ss_pred cCcceeccccCcc-ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHH
Confidence 00100 0 011 122344455555555555344444555577777777788888999999999999999999999999
Q ss_pred HHHhhhhheecCCCC
Q 016869 334 AVLIGLIIYSTTAKD 348 (381)
Q Consensus 334 lil~G~~l~~~~~~~ 348 (381)
++..|.+++.....+
T Consensus 304 lVF~Gt~~fa~~~~~ 318 (330)
T KOG1583|consen 304 LVFFGTLLFANVWNH 318 (330)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999865444
No 31
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.26 E-value=8.3e-11 Score=92.79 Aligned_cols=127 Identities=20% Similarity=0.251 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc---c---chhhHHHHHHHHHHHHHHHHH
Q 016869 26 LLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ---R---LQVSWYWYLLLGFVDVQGNFL 99 (381)
Q Consensus 26 ~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~---~---~~~~~~~~~~~g~~~~~~~~~ 99 (381)
..+.+.|++.+....+++.=. +..+|.+.++.|-+...++++.+....++ . .++.|....+.|+.....-.+
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl--~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~ 83 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGL--EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLL 83 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHH
Confidence 345555555555555554333 34689999999999888888777665432 1 356677777777666666777
Q ss_pred HHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869 100 FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML 154 (381)
Q Consensus 100 ~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~ 154 (381)
+|.|++...++.+..+..++|+++.+++++++|||++..+|+|+.+..+|++++.
T Consensus 84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 8999999999999999999999999999999999999999999999999998764
No 32
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.19 E-value=1e-08 Score=93.25 Aligned_cols=244 Identities=13% Similarity=0.130 Sum_probs=163.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhccch---hhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhh-cChhHHHHHHH
Q 016869 52 APITQSVLCYLSLALAYGGILLYRRQRLQ---VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLD-CCAIPCAIVFT 127 (381)
Q Consensus 52 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~~~lls 127 (381)
+|..+.+--.+.+.++-+.....+++... ..+..-++.|++...++...+.|+++.+++.+..+. ..+.+.+.+++
T Consensus 11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g 90 (269)
T PF06800_consen 11 KPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG 90 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence 45666554444444433333344444332 566777888999999999999999999998887766 56667899999
Q ss_pred HHHhcccccHHHH----HHHHHHHhhhHHhhcccccccC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 016869 128 WVFLGTRYSVWQL----FGASLCVLGLGLMLLSDAEMAG-GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVV 202 (381)
Q Consensus 128 ~~~l~er~~~~~~----~gi~l~~~Gv~l~~~~~~~~~~-~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~ 202 (381)
.++++|-.+..++ .++++.++|+.+....|...+. +...+...|.+..+++++.|..|.+..|.. +.|+.+..
T Consensus 91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~ 168 (269)
T PF06800_consen 91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAF 168 (269)
T ss_pred HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhH
Confidence 9999998776654 4888889999999888753221 123345679999999999999999987763 45666665
Q ss_pred HHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcc-ccccccccchhhHHHHHHHHHH
Q 016869 203 CMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLEL-KSLESVKWSTDIILSFVGNAAS 281 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 281 (381)
.-+. .|.++..+.. ..... ..+....|.. .+. +..
T Consensus 169 lPqa-iGm~i~a~i~-------------------------------------~~~~~~~~~~k~~~~n-----il~-G~~ 204 (269)
T PF06800_consen 169 LPQA-IGMLIGAFIF-------------------------------------NLFSKKPFFEKKSWKN-----ILT-GLI 204 (269)
T ss_pred HHHH-HHHHHHHHHH-------------------------------------hhcccccccccchHHh-----hHH-HHH
Confidence 5554 6666654332 11111 1111112221 111 112
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHH----HHHHHHHHHhhhhh
Q 016869 282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWT----YYLAFAAVLIGLII 341 (381)
Q Consensus 282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~----~~iG~~lil~G~~l 341 (381)
...++..+..+.+..+..++=....+.++++.+.+.+++||+-+.+ .++|.++++.|.++
T Consensus 205 w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 205 WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 3344466667777877766666666667999999999999998875 45688888888654
No 33
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.19 E-value=2.4e-10 Score=96.85 Aligned_cols=223 Identities=16% Similarity=0.260 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCC
Q 016869 87 LLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGS 166 (381)
Q Consensus 87 ~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~ 166 (381)
....++..+.|+.+..+++..+++.++-+..+.-.|+.+++++.+|+|+...++++.++++-|++++...|. .+.
T Consensus 57 aPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-----~~a 131 (290)
T KOG4314|consen 57 APFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-----EHA 131 (290)
T ss_pred cceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-----hhh
Confidence 334555667799999999999999999999999999999999999999999999999999999999997763 456
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869 167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA 246 (381)
Q Consensus 167 ~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 246 (381)
....|..+++.++...|+|-+.-|+...+.+--+...+++-.|.+-......|.+++++
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~--------------------- 190 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAF--------------------- 190 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHH---------------------
Confidence 67899999999999999999999999887765554444333343333222333322221
Q ss_pred cccCCcccchhcc-ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhccccc
Q 016869 247 FIPLPSFRSTLEL-KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVN 325 (381)
Q Consensus 247 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t 325 (381)
...|. +++...+ |....|.+..+..++.+.+.++....+...++-+.....--...+.++-+-..+
T Consensus 191 --------T~VE~~qsFA~~P-----WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~n 257 (290)
T KOG4314|consen 191 --------TGVEHLQSFAAAP-----WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFN 257 (290)
T ss_pred --------hchHHHHHHhhCC-----chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHH
Confidence 11122 2333333 345666666677888888999998888888887665555667777776666788
Q ss_pred HHHHHHHHHHHhhhhheecCCCC
Q 016869 326 WTYYLAFAAVLIGLIIYSTTAKD 348 (381)
Q Consensus 326 ~~~~iG~~lil~G~~l~~~~~~~ 348 (381)
...+.|..++.+|.++....+.+
T Consensus 258 tl~La~T~iI~i~FiLiiiP~d~ 280 (290)
T KOG4314|consen 258 TLFLAATCIICIGFILIIIPEDK 280 (290)
T ss_pred HHHHHHHHHHHHhHHheecccch
Confidence 89999999999999988876544
No 34
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.09 E-value=1.4e-09 Score=87.17 Aligned_cols=100 Identities=24% Similarity=0.404 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcc-------chhhHHHHHHHHHHHH-HHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHH
Q 016869 58 VLCYLSLALAYGGILLYRRQR-------LQVSWYWYLLLGFVDV-QGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWV 129 (381)
Q Consensus 58 ~~r~~~~~l~l~~~~~~~~~~-------~~~~~~~~~~~g~~~~-~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~ 129 (381)
.+|+..+.+.+..+...+++. .++++.+....|.++. ....++++|.++.+ +.+..+.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 468888888877766654321 1244566666688776 55778899999999 58889999999999999999
Q ss_pred HhcccccHHHHHHHHHHHhhhHHhhcccc
Q 016869 130 FLGTRYSVWQLFGASLCVLGLGLMLLSDA 158 (381)
Q Consensus 130 ~l~er~~~~~~~gi~l~~~Gv~l~~~~~~ 158 (381)
++|||++++++.++.++++|++++..+|.
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999875
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.08 E-value=7.9e-10 Score=89.67 Aligned_cols=118 Identities=25% Similarity=0.437 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhh--h---ccchhhHHHHHHHHHHH-HHHHHHHHHHhhcc
Q 016869 34 SLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR--R---QRLQVSWYWYLLLGFVD-VQGNFLFNKAFQFT 107 (381)
Q Consensus 34 ~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~---~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~ 107 (381)
+|+......+...++ .+|....++|+..+++ +++..... + +..++.+......+.+. ...+.+++.++++.
T Consensus 2 ~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred eeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 355566667776654 7899999999999986 44433322 2 12234556666677774 55688889999999
Q ss_pred chhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869 108 SISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML 154 (381)
Q Consensus 108 ~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~ 154 (381)
+++.++++..+.|+++.+++++++|||+++++++|+.+++.|+.++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998864
No 36
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.07 E-value=1e-10 Score=103.84 Aligned_cols=262 Identities=15% Similarity=0.170 Sum_probs=180.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHh-hh-------ccch---hhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcC
Q 016869 50 VDAPITQSVLCYLSLALAYGGILLY-RR-------QRLQ---VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC 118 (381)
Q Consensus 50 ~~~p~~~~~~r~~~~~l~l~~~~~~-~~-------~~~~---~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~ 118 (381)
-..|.+.++..-+....+.+.+-.. ++ ++.+ ...+....+.+....+..+-++.+.|++++...+=+++
T Consensus 58 Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsL 137 (347)
T KOG1442|consen 58 LDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSL 137 (347)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccch
Confidence 4578888888877665554433221 11 1111 22344555566666666666899999999999999999
Q ss_pred hhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 016869 119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR 198 (381)
Q Consensus 119 ~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~ 198 (381)
..+|+.+++++++|+|-+..-..++++.++|..+=.-.+. ..+.-...|.++++.+.++-|+..+..||.....+.
T Consensus 138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~----~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~ 213 (347)
T KOG1442|consen 138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG----STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGD 213 (347)
T ss_pred hhhHHHHhHHhhcccccccccceeehhheehheecccccc----ccCccchhhhHHHHHHHHHHHHHHHhhheecccccC
Confidence 9999999999999999888888888877777655433321 344566799999999999999999999987665543
Q ss_pred --hHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcc-ccccccccchhhHHHH
Q 016869 199 --VEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLEL-KSLESVKWSTDIILSF 275 (381)
Q Consensus 199 --~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 275 (381)
.....+....+.+... |.+++- +.++. ..+. .-+..+.|++.
T Consensus 214 ~iw~lt~ynnv~a~lLfl----pll~ln------------------------------ge~~~v~~~~-~l~a~~Fw~~m 258 (347)
T KOG1442|consen 214 CIWRLTAYNNVNALLLFL----PLLILN------------------------------GEFQAVVGFP-HLPAIKFWILM 258 (347)
T ss_pred eehhhHHHHHHHHHHHHH----HHHHHc------------------------------chHHHHcCcc-cchHHHHHHHH
Confidence 3555555555555543 331110 11111 1111 23345556554
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCCC
Q 016869 276 VGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL 350 (381)
Q Consensus 276 ~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~~ 350 (381)
...+.+.+.......+-+|..++.+-.++..-.-....++++.+++|.-+..-|-|-.+++.|...|.+.++.++
T Consensus 259 tLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em 333 (347)
T KOG1442|consen 259 TLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEM 333 (347)
T ss_pred HHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHH
Confidence 444443443334445557778888888888878788899999999999999999999999999999998665433
No 37
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.05 E-value=1.2e-09 Score=88.49 Aligned_cols=125 Identities=20% Similarity=0.281 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcc
Q 016869 180 IFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLEL 259 (381)
Q Consensus 180 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 259 (381)
++||.+.+..|+..++.|+.....+....+.+ ..... ...+.
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------------------------------~~~~~ 42 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILL-------------------------------------LILGR 42 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHH-------------------------------------Hhhcc
Confidence 46889999999999999999888888877765 32221 11111
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhh
Q 016869 260 KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGL 339 (381)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~ 339 (381)
.+....++.......+.+... ....+.++++++++.++..++....++|+++.+++++++||++++.+++|+++++.|+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~ 121 (126)
T PF00892_consen 43 KPFKNLSPRQWLWLLFLGLLG-TALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGV 121 (126)
T ss_pred ccccCCChhhhhhhhHhhccc-eehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 111222333333444454433 4667799999999999999999999999999999999999999999999999999998
Q ss_pred hhee
Q 016869 340 IIYS 343 (381)
Q Consensus 340 ~l~~ 343 (381)
++..
T Consensus 122 ~l~~ 125 (126)
T PF00892_consen 122 VLIS 125 (126)
T ss_pred HHHH
Confidence 8753
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.05 E-value=3.2e-09 Score=83.89 Aligned_cols=135 Identities=16% Similarity=0.165 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccC
Q 016869 171 GDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPL 250 (381)
Q Consensus 171 G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (381)
..++++++++++++..+..|-..++.|+.............+......
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~-------------------------------- 51 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLL-------------------------------- 51 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence 458999999999999999999889888876666655444444432210
Q ss_pred CcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhc-chhhHHHHHhHHHHHHHHHHHHHhhcccccHHHH
Q 016869 251 PSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKL-SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY 329 (381)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~ 329 (381)
..-..+...+.+... |...+..+........+|+++++. ..+.++++... .|+++++++++++||+++..++
T Consensus 52 ----~~g~~~~~~~~~~k~--~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~-svvl~~lls~lfL~E~ls~~~~ 124 (140)
T COG2510 52 ----VTGNWQAGGEIGPKS--WLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKT-SVVLAVLLSILFLGERLSLPTW 124 (140)
T ss_pred ----hcCceecccccCcce--ehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccc-cHHHHHHHHHHHhcCCCCHHHH
Confidence 000011111122222 333333334456677899999999 55556666555 4599999999999999999999
Q ss_pred HHHHHHHhhhhheec
Q 016869 330 LAFAAVLIGLIIYST 344 (381)
Q Consensus 330 iG~~lil~G~~l~~~ 344 (381)
+|+.+|++|.++...
T Consensus 125 iG~~LI~~Gailvs~ 139 (140)
T COG2510 125 IGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHhCeeeEec
Confidence 999999999987754
No 39
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.00 E-value=1.5e-08 Score=85.59 Aligned_cols=137 Identities=15% Similarity=0.256 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC-------ChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccc
Q 016869 171 GDILVIAGAIFFAMSYVGEEFLVKKI-------DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKF 243 (381)
Q Consensus 171 G~ll~l~a~~~~a~~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 243 (381)
|.++++.|.++.|++.++.|+..++. ++.+...+....+.++..+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~-------------------------- 54 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLA-------------------------- 54 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 67899999999999999999987662 455666666666666654322
Q ss_pred ccccccCCcccchhcccc-------cc--ccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHH
Q 016869 244 PFAFIPLPSFRSTLELKS-------LE--SVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVI 314 (381)
Q Consensus 244 p~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i 314 (381)
...|... .. +.+.....+...+..+...+..+...+..+++.++.+.++......+...+
T Consensus 55 -----------~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~ 123 (153)
T PF03151_consen 55 -----------FLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVIL 123 (153)
T ss_pred -----------HHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHH
Confidence 1111111 00 001022333444444555677888999999999999999999999999999
Q ss_pred HHHHhhcccccHHHHHHHHHHHhhhhheec
Q 016869 315 LRIFCYHQQVNWTYYLAFAAVLIGLIIYST 344 (381)
Q Consensus 315 ~~~~~~~e~~t~~~~iG~~lil~G~~l~~~ 344 (381)
.+++++||++|+.+++|.++.+.|.++|++
T Consensus 124 ~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 124 LSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 999999999999999999999999999974
No 40
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.93 E-value=2.4e-08 Score=89.91 Aligned_cols=197 Identities=13% Similarity=0.131 Sum_probs=125.5
Q ss_pred hhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc---------------ccCC-----CCCcc
Q 016869 109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE---------------MAGG-----GGSRP 168 (381)
Q Consensus 109 ~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~---------------~~~~-----~~~~~ 168 (381)
........+..++++++..+.+.+||.+..|+++..+...|++.....|.. .++. .....
T Consensus 4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~ 83 (222)
T TIGR00803 4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNP 83 (222)
T ss_pred ccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccH
Confidence 344556678888899999988889998899999999988888754333221 0010 11244
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCChh--HHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869 169 LLGDILVIAGAIFFAMSYVGEEFLVKKIDRV--EVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA 246 (381)
Q Consensus 169 ~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 246 (381)
..|....+.+..+-+...+++++..|+.+.. .......+++.+......
T Consensus 84 ~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~----------------------------- 134 (222)
T TIGR00803 84 VVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVL----------------------------- 134 (222)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 5677778888888889999999987664322 111111222222211000
Q ss_pred cccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccH
Q 016869 247 FIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNW 326 (381)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~ 326 (381)
.....+ ...+...+. .++...+... .+....+.+..+.+|+.++.+.++....+++++.+++++++||+++.
T Consensus 135 ~~~~~~--~~~~~~~~~--~~~~~~~~~~----~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~ 206 (222)
T TIGR00803 135 LWSDGT--LISNFGFFI--GYPTAVWIVG----LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISS 206 (222)
T ss_pred hhcccc--hhhccCccc--CCchHHHHHH----HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccH
Confidence 000000 000011111 1222222222 22334446788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhe
Q 016869 327 TYYLAFAAVLIGLIIY 342 (381)
Q Consensus 327 ~~~iG~~lil~G~~l~ 342 (381)
.+++|..+++.|+.+|
T Consensus 207 ~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 207 TFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHHHeeeEeC
Confidence 9999999999998765
No 41
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.89 E-value=1.3e-07 Score=81.92 Aligned_cols=261 Identities=11% Similarity=0.074 Sum_probs=179.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHhhhccc-hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHH
Q 016869 49 GVDAPITQSVLCYLSLALAYGGILLYRRQRL-QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127 (381)
Q Consensus 49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls 127 (381)
++.--+.+.+.+-+.+.+-++.+-+.|.... .++.+.++..+++-....+..-.+++|.++...++...++.+..+...
T Consensus 33 gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygE 112 (309)
T COG5070 33 GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGE 112 (309)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhH
Confidence 5544566666666655555543322221111 233445566677777777777899999999999999999999999999
Q ss_pred HHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccC--ChhHHHHHH
Q 016869 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMI 205 (381)
Q Consensus 128 ~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~ 205 (381)
..++|.|.+-.+..+-++.++.-....++|...........+.|++++...++.-+.+....|+..+-. ...+.+.+.
T Consensus 113 vl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYn 192 (309)
T COG5070 113 VLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYN 192 (309)
T ss_pred HHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHh
Confidence 999999999999999999988888887776421111112446799999999999999999999876543 335666666
Q ss_pred HHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcccccc----ccccchhhHHHHHHHHHH
Q 016869 206 GVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLE----SVKWSTDIILSFVGNAAS 281 (381)
Q Consensus 206 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 281 (381)
.+.+..+..... ..+|..+.. ..+.....++.+-+.+
T Consensus 193 NllslPiL~~~s-------------------------------------~~~edws~~n~annl~~d~l~am~ISgl~-- 233 (309)
T COG5070 193 NLLSLPILLSFS-------------------------------------FLFEDWSPGNLANNLSVDSLMAMFISGLC-- 233 (309)
T ss_pred hhHHHHHHHHHH-------------------------------------HHhccCCcchhhcCCChHHHHHHHHHHHH--
Confidence 656655543222 122221111 1222222333333332
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869 282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD 348 (381)
Q Consensus 282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~ 348 (381)
.++--..-.|.++..+++.-++...++..-..+.|.++|||+.+...+....+=.++..+|...+.+
T Consensus 234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~ 300 (309)
T COG5070 234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK 300 (309)
T ss_pred HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2322245567888899998888888777888999999999999999999988888888888876544
No 42
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.88 E-value=3.3e-07 Score=85.96 Aligned_cols=218 Identities=13% Similarity=0.172 Sum_probs=125.2
Q ss_pred HHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCC--------
Q 016869 94 VQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGG-------- 165 (381)
Q Consensus 94 ~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~-------- 165 (381)
..++...+.|+.+.|.+..+.+.....++.++++..++|||++++++.|+.++++|..++....++.+....
T Consensus 61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~ 140 (300)
T PF05653_consen 61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALL 140 (300)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHh
Confidence 334666789999999999999999999999999999999999999999999999999987654432111100
Q ss_pred -CcchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH-HHHhhcccccccchhccccccccccccccc
Q 016869 166 -SRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVS-VVQLYPFLLGDMITFTYNKLYTSLCGMIKF 243 (381)
Q Consensus 166 -~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 243 (381)
+.....+... ...+...+.....+|..++ +...........|.... .... +
T Consensus 141 ~~~~fl~y~~~-~~~~~~~L~~~~~~r~g~~-~i~vyi~i~sl~Gs~tvl~~K~-------------------------i 193 (300)
T PF05653_consen 141 SQPGFLVYFIL-VLVLILILIFFIKPRYGRR-NILVYISICSLIGSFTVLSAKA-------------------------I 193 (300)
T ss_pred cCcceehhHHH-HHHHHHHHHHhhcchhccc-ceEEEEEEeccccchhhhHHHH-------------------------H
Confidence 0011111111 1112222222222221111 11111111111111110 0000 0
Q ss_pred ccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcc
Q 016869 244 PFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQ 322 (381)
Q Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e 322 (381)
-.... ..++.++ +. ..+..|.+.+....+....-...++++++.++. +.++.+..-...+++-+.++++|
T Consensus 194 ~~~i~------~~~~g~~--~f-~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e 264 (300)
T PF05653_consen 194 SILIK------LTFSGDN--QF-TYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQE 264 (300)
T ss_pred HHHHH------HHhcCch--hh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcc
Confidence 00000 1111111 11 123345555555555666667888899995544 55566666668889999999998
Q ss_pred c--ccH----HHHHHHHHHHhhhhheecCCC
Q 016869 323 Q--VNW----TYYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 323 ~--~t~----~~~iG~~lil~G~~l~~~~~~ 347 (381)
. .++ ....|+.+++.|+.+.+..++
T Consensus 265 ~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~ 295 (300)
T PF05653_consen 265 FSRMTAWQIIGFLCGFLIIIIGVFLLSSSKD 295 (300)
T ss_pred cccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence 5 344 456788999999999876543
No 43
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.86 E-value=8.8e-08 Score=88.18 Aligned_cols=130 Identities=22% Similarity=0.253 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc---chhhHHHHHHHHHHHH-HHH
Q 016869 22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR---LQVSWYWYLLLGFVDV-QGN 97 (381)
Q Consensus 22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~g~~~~-~~~ 97 (381)
.++...+.+.+++++..+...+...++...++.....+++.++++++.+.....++. .++.+...+..+.+.. .+.
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAY 206 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 567777788888888888887777654333344555578888888888776644322 1334444566676664 457
Q ss_pred HHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhH
Q 016869 98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG 151 (381)
Q Consensus 98 ~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~ 151 (381)
.+++.++++.+++.++.+..+.|++++++++++++||++..++.|+.+.+.|+.
T Consensus 207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 778999999999999999999999999999999999999999999999998863
No 44
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.63 E-value=1.1e-06 Score=82.74 Aligned_cols=138 Identities=12% Similarity=0.148 Sum_probs=100.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869 167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA 246 (381)
Q Consensus 167 ~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 246 (381)
+...|.++.+++++.|+...+..|.. .+.++.+...+...++.++.....
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~----------------------------- 54 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLM----------------------------- 54 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 45689999999999999999999864 668888888888878776543211
Q ss_pred cccCCcccchhc-cccccccccchhhHHH-HHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccc
Q 016869 247 FIPLPSFRSTLE-LKSLESVKWSTDIILS-FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQV 324 (381)
Q Consensus 247 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~ 324 (381)
.... .+.......+...+.. ..+ .......+.++++++++.++..+++...+.|++..+++++++||++
T Consensus 55 --------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~ 125 (296)
T PRK15430 55 --------SICRQWSYLKTLIQTPQKIFMLAVS-AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERF 125 (296)
T ss_pred --------HHHccHHHHHHHHcCHHHHHHHHHH-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0000 0000000001122221 222 2224556789999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHhhhhhee
Q 016869 325 NWTYYLAFAAVLIGLIIYS 343 (381)
Q Consensus 325 t~~~~iG~~lil~G~~l~~ 343 (381)
+..+++|.++.++|+.+..
T Consensus 126 ~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 126 RRMQWLAVILAICGVLVQL 144 (296)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 45
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.57 E-value=5.8e-05 Score=71.64 Aligned_cols=108 Identities=14% Similarity=0.114 Sum_probs=81.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHH-hhcChhHHHHHHHHHHhcccc-------cHHHHHHHHHHHhhhH
Q 016869 80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTL-LDCCAIPCAIVFTWVFLGTRY-------SVWQLFGASLCVLGLG 151 (381)
Q Consensus 80 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~i-l~~~~pi~~~lls~~~l~er~-------~~~~~~gi~l~~~Gv~ 151 (381)
...+...++.|.+...++..+..+.++.+++.... -..+.-+...++..++++|=. .....+|+++.++|++
T Consensus 70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 44566667788888889999999999999987754 446667888888888887533 2457889999999999
Q ss_pred Hhhc----ccccccC--CCCCcchhHHHHHHHHHHHHHHHHH
Q 016869 152 LMLL----SDAEMAG--GGGSRPLLGDILVIAGAIFFAMSYV 187 (381)
Q Consensus 152 l~~~----~~~~~~~--~~~~~~~~G~ll~l~a~~~~a~~~v 187 (381)
+... .|...++ ..+.+...|.++++++++.++.|..
T Consensus 150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~ 191 (345)
T PRK13499 150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF 191 (345)
T ss_pred HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence 9988 4321111 2234567899999999999999993
No 46
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.55 E-value=2.8e-06 Score=78.14 Aligned_cols=138 Identities=12% Similarity=0.203 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccccc
Q 016869 170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIP 249 (381)
Q Consensus 170 ~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (381)
.|.++.++++++|+...+..|. ..+.++.+...+.++++.++..... .. .
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~-~~---------------------------~- 51 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSV-TL---------------------------F- 51 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHH-HH---------------------------H-
Confidence 4889999999999999999997 4568889999988878776643211 00 0
Q ss_pred CCcccchhc--cccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHH
Q 016869 250 LPSFRSTLE--LKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWT 327 (381)
Q Consensus 250 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~ 327 (381)
...+ .+.....+.. ..+......+......+.++++++++.++..+++...+.|+++.+++++++||+++.+
T Consensus 52 -----~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~ 125 (256)
T TIGR00688 52 -----RQWAALIERLKRIQKR-PLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF 125 (256)
T ss_pred -----cchHHHHHHHhCcccc-hHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 0000 0011111111 1121222222224556688999999999999999899999999999999999999999
Q ss_pred HHHHHHHHHhhhhhee
Q 016869 328 YYLAFAAVLIGLIIYS 343 (381)
Q Consensus 328 ~~iG~~lil~G~~l~~ 343 (381)
+++|..+.++|+.+..
T Consensus 126 ~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 126 QFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988664
No 47
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.53 E-value=2.3e-06 Score=79.97 Aligned_cols=131 Identities=10% Similarity=0.071 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCC
Q 016869 172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLP 251 (381)
Q Consensus 172 ~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 251 (381)
.++.+++++++|...+..|+..++.+..+ .+....+.+... |+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~--~~~~~~~~~~l~----~~------------------------------- 45 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDFL--WWALLAHSVLLT----PY------------------------------- 45 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHHH--HHHHHHHHHHHH----HH-------------------------------
Confidence 46789999999999999998877644432 222222222221 22
Q ss_pred cccchhc--cccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHH
Q 016869 252 SFRSTLE--LKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY 329 (381)
Q Consensus 252 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~ 329 (381)
.... .......+... +......+.....++.+++++.++.++..+.......|+++.+++++++||+++..++
T Consensus 46 ---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~ 120 (281)
T TIGR03340 46 ---GLWYLAQVGWSRLPATF--WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAW 120 (281)
T ss_pred ---HHHhcccCCCCCcchhh--HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHH
Confidence 1110 11111111122 2222222333556778888999998888888877778999999999999999999999
Q ss_pred HHHHHHHhhhhheec
Q 016869 330 LAFAAVLIGLIIYST 344 (381)
Q Consensus 330 iG~~lil~G~~l~~~ 344 (381)
+|..+++.|+++...
T Consensus 121 ~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 121 LGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987654
No 48
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.51 E-value=3.6e-06 Score=79.03 Aligned_cols=132 Identities=12% Similarity=0.004 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc-----chhhHHHHHHHHHHHHHH-
Q 016869 23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR-----LQVSWYWYLLLGFVDVQG- 96 (381)
Q Consensus 23 ~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~- 96 (381)
.+...+.+.+++++..+...+...+ .++...+.+....+++.+.+........ ....|......+++....
T Consensus 150 ~G~l~~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 150 WGAILILIASASWAFGSVWSSRLPL---PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC---CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 4555555556666655555555442 2345566777777777777665433211 124455666667765444
Q ss_pred HHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 97 ~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
..+++.++++.+++.++.+..+.|++++++++++++|+++..+++|..+.+.|+.+....+
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 6777999999999999999999999999999999999999999999999999999886653
No 49
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.51 E-value=5.8e-06 Score=67.52 Aligned_cols=122 Identities=8% Similarity=0.083 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccccc
Q 016869 170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIP 249 (381)
Q Consensus 170 ~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (381)
.|.++.+.+.++-+...++-|+-.++.+..+.... . ...+..
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~-~~~~~~------------------------------------ 43 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F-IAALLA------------------------------------ 43 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H-HHHHHH------------------------------------
Confidence 47889999999999999999988776543321111 0 000000
Q ss_pred CCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHH--hhcccccHH
Q 016869 250 LPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIF--CYHQQVNWT 327 (381)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~--~~~e~~t~~ 327 (381)
. . +. ....+.++.+ ....+.+|.+++++.+...+.-.....++...+.++. ++||++|+.
T Consensus 44 ------~---------~-~p-~~~i~lgl~~-~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~ 105 (129)
T PRK02971 44 ------F---------G-LA-LRAVLLGLAG-YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK 105 (129)
T ss_pred ------H---------h-cc-HHHHHHHHHH-HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence 0 0 00 0123455544 4556689999999987777765555555777777774 899999999
Q ss_pred HHHHHHHHHhhhhheecCCC
Q 016869 328 YYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 328 ~~iG~~lil~G~~l~~~~~~ 347 (381)
+++|.++|++|+++.++.++
T Consensus 106 ~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 106 KTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHhccCCC
Confidence 99999999999999876544
No 50
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.49 E-value=4.6e-06 Score=80.33 Aligned_cols=135 Identities=16% Similarity=0.113 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-cch-----hh--HHHHHHHHHHH
Q 016869 22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-RLQ-----VS--WYWYLLLGFVD 93 (381)
Q Consensus 22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~-----~~--~~~~~~~g~~~ 93 (381)
..+..+....+++|+......+...+ ...++...+++...+.++.+.+......+ ..+ .+ ....+..+++.
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t 266 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIIT 266 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHH
Confidence 44666666667777766666665544 23344455656555555555443332211 100 11 11222233433
Q ss_pred HHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 94 VQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 94 ~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
..+..++++++++.+++.+++...+.|++++++++++++|++++.+++|.++.+.|+.+.....
T Consensus 267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK 330 (358)
T ss_pred HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence 3345667899999999999999999999999999999999999999999999999999987654
No 51
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.47 E-value=7.3e-06 Score=77.02 Aligned_cols=133 Identities=15% Similarity=-0.021 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc---chhhHHHHHHHHHHHHHH-H
Q 016869 22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR---LQVSWYWYLLLGFVDVQG-N 97 (381)
Q Consensus 22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~g~~~~~~-~ 97 (381)
..+..++...+++++......+...+ ..+|...... .+.+++++.++.....+. ....+...+..|++.... .
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~ 223 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGA--EHGPATVAIG-SLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPY 223 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHHHHH-HHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 34667777777777776666666653 2455555444 355566666655543221 112232335566666555 5
Q ss_pred HHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 98 ~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
.++++++++.+++.++++..+.|+++.++++++++|+++..|++|..+.+.|++......
T Consensus 224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 567999999999999999999999999999999999999999999999999999886553
No 52
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=2.6e-06 Score=78.26 Aligned_cols=224 Identities=12% Similarity=0.154 Sum_probs=130.8
Q ss_pred HHHHHH-HHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCC---
Q 016869 90 GFVDVQ-GNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGG--- 165 (381)
Q Consensus 90 g~~~~~-~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~--- 165 (381)
|.+.+. +...-+.|+.+.|.+..+.+.+++.+..++++..++|||+++...+|+.++++|-.++....++.++-..
T Consensus 70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~e 149 (335)
T KOG2922|consen 70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEE 149 (335)
T ss_pred HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHH
Confidence 444444 3677789999999999999999999999999999999999999999999999999988876542111000
Q ss_pred ---CcchhHHHHHHHH-HHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH-HHHhhcccccccchhcccccccccccc
Q 016869 166 ---SRPLLGDILVIAG-AIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVS-VVQLYPFLLGDMITFTYNKLYTSLCGM 240 (381)
Q Consensus 166 ---~~~~~G~ll~l~a-~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~ 240 (381)
.....+.+.-.+- .+...+-....+......+...+.....+.|.+-. .+..
T Consensus 150 l~~~~~~~~Fliy~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKa----------------------- 206 (335)
T KOG2922|consen 150 VWELATEPGFLVYVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKA----------------------- 206 (335)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHH-----------------------
Confidence 0001111111111 11111111111111111122333333222221110 0000
Q ss_pred cccccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhc-chhhHHHHHhHHHHHHHHHHHHHh
Q 016869 241 IKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKL-SGATMLILSVLTSDMWAVILRIFC 319 (381)
Q Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~a~~~~~~~~~~pv~a~i~~~~~ 319 (381)
+-.+. +..+...+ +.. .+..|+..+..+.|....-...+++++. -.+.+.++.+..-..++++.+.++
T Consensus 207 --lg~ai------klt~~g~~--ql~-~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~ 275 (335)
T KOG2922|consen 207 --LGIAI------KLTFSGNN--QLF-YPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAIL 275 (335)
T ss_pred --HHHHH------HHHhcCCc--ccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH
Confidence 00000 01111111 111 1245566666666555555677889999 555666777777778899999999
Q ss_pred hcccc--c----HHHHHHHHHHHhhhhheecCCC
Q 016869 320 YHQQV--N----WTYYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 320 ~~e~~--t----~~~~iG~~lil~G~~l~~~~~~ 347 (381)
|+|-- + ..++.|+..++.|+.+....++
T Consensus 276 Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd 309 (335)
T KOG2922|consen 276 FKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKD 309 (335)
T ss_pred HHHhcCCcHHHHHHHHHhHHHhhheeeEeeeecc
Confidence 99853 2 2577899999999998866543
No 53
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.38 E-value=1.7e-05 Score=66.74 Aligned_cols=128 Identities=15% Similarity=0.117 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-----CCCchhHHHHHHHHHHHHHHHHHHHhhhc-c---------------chhhH
Q 016869 25 LLLGQLVSFSLALSSFTTAVITDL-----GVDAPITQSVLCYLSLALAYGGILLYRRQ-R---------------LQVSW 83 (381)
Q Consensus 25 ~~~~~l~a~~~~~~~~~~~~l~~~-----~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~---------------~~~~~ 83 (381)
+.++....++.+.-+...+.+.+. ...+|..+....-..+.+.+.+.....+. + ..+.+
T Consensus 2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
T PF03151_consen 2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI 81 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence 455666666777777777766655 57788888888888888888776543211 0 12334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHH
Q 016869 84 YWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGL 152 (381)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l 152 (381)
...+..|++....|...+..++++++...+++.....+.+.++++++++|+++..++.|+.++++|+++
T Consensus 82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 555666777777788889999999999999999999999999999999999999999999999999875
No 54
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.30 E-value=2.2e-05 Score=73.80 Aligned_cols=129 Identities=16% Similarity=0.002 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc----cchhhHHHHHHHHHHHHHHHHH
Q 016869 24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ----RLQVSWYWYLLLGFVDVQGNFL 99 (381)
Q Consensus 24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~ 99 (381)
+..++.+.+++++......+...+ ..+|....+ ...++.+.+....... .....|...+..++....+..+
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~~--~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l 231 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYAR--GKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAA 231 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC--CCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555543 234544322 2223333332222211 1123344445555544445778
Q ss_pred HHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 100 FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 100 ~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
++.++++.+++.++.+.++.|+++.++++++++|+++..+++|..+.+.|+.+....+
T Consensus 232 ~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 232 WNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 8999999999999999999999999999999999999999999999999998887653
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.25 E-value=5.4e-05 Score=71.37 Aligned_cols=136 Identities=16% Similarity=0.097 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHh-hh---------ccchhhHHHHHHHH
Q 016869 22 LYLLLLGQLVSFSLALSSFTTAVITDLGV-DAPITQSVLCYLSLALAYGGILLY-RR---------QRLQVSWYWYLLLG 90 (381)
Q Consensus 22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~-~~p~~~~~~r~~~~~l~l~~~~~~-~~---------~~~~~~~~~~~~~g 90 (381)
..+..++.+.+++++......+...+... .+.....++-.....+.+...... .. ....+.|...+..|
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 35777777777777777777776654321 122233333333333322222111 11 11123455566667
Q ss_pred HHHHHH-HHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 91 FVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 91 ~~~~~~-~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
++.... ..+++.++++.++..++.+..+.|++..++++++++|+++..+++|..+.+.|+.+...+.
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 666655 5666889999999999999999999999999999999999999999999999999887653
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.24 E-value=2e-05 Score=74.37 Aligned_cols=135 Identities=13% Similarity=0.066 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-c-chh---h---------HHH-HH
Q 016869 23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-R-LQV---S---------WYW-YL 87 (381)
Q Consensus 23 ~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~-~~~---~---------~~~-~~ 87 (381)
.|..++.+.+++++......+...+....+|...+.+....+++.+.|....... . ... . ... .+
T Consensus 145 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
T TIGR00817 145 AGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL 224 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence 4555555555555555555555444335678888888888888888887553221 1 000 0 011 11
Q ss_pred HHHH-HHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 88 LLGF-VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 88 ~~g~-~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
..+. +....+...+.+++++++..+++.....|++++++++++++|+++..+++|..+++.|+.+....+
T Consensus 225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 1122 111224455689999999999999999999999999999999999999999999999999987653
No 57
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.20 E-value=3.1e-05 Score=61.62 Aligned_cols=60 Identities=8% Similarity=0.003 Sum_probs=54.8
Q ss_pred HHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhc
Q 016869 96 GNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL 155 (381)
Q Consensus 96 ~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~ 155 (381)
..++...+++..|.+.+..+.++.++++.+++++++|||++++|++|+.++++|++++..
T Consensus 50 ~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 50 AMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 366668999999999998888899999999999999999999999999999999998754
No 58
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.17 E-value=5.1e-05 Score=69.09 Aligned_cols=143 Identities=10% Similarity=0.136 Sum_probs=107.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869 167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA 246 (381)
Q Consensus 167 ~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 246 (381)
+...|.++++.+-+.|+.--.+.|- .+..+..|......+|+..+..+...+.
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kl-l~~~~~~eIlahRviwS~~~~l~ll~~~-------------------------- 56 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKL-LEPLPATEILAHRVIWSFPFMLALLFLL-------------------------- 56 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 3457999999999999999888874 5667888999998888888876544111
Q ss_pred cccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccH
Q 016869 247 FIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNW 326 (381)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~ 326 (381)
-..+...+.-.+.+.+..+...+.....-+..+.|+.+......+++-++++|++.++++.+++||+++.
T Consensus 57 ----------r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~ 126 (293)
T COG2962 57 ----------RQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSR 126 (293)
T ss_pred ----------hhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccH
Confidence 1112222222233344444444443556667889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhheecCC
Q 016869 327 TYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 327 ~~~iG~~lil~G~~l~~~~~ 346 (381)
.|++...+..+|+..-....
T Consensus 127 ~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 127 LQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999999999987766543
No 59
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.14 E-value=4e-05 Score=71.88 Aligned_cols=129 Identities=11% Similarity=0.088 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHH---H-HHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHH
Q 016869 22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCY---L-SLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN 97 (381)
Q Consensus 22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~---~-~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 97 (381)
.+++..+.+.+++.+......+... .+|...++... + .+.+++.++ .+.++...+..+..++.|++...++
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gi~~~ia~ 225 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAFG----VDGLSVLLPQAIGMVIGGIIFNLGH-ILAKPLKKYAILLNILPGLMWGIGN 225 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcC----CCcceehhHHHHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHHHH
Confidence 5688888888777766655555442 46666644333 3 333333333 1112222334445566888876667
Q ss_pred HHHHHHhh-ccchhhHHHhhcChhHHHHHHHHHHhcccccHHHH----HHHHHHHhhhHHhhc
Q 016869 98 FLFNKAFQ-FTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQL----FGASLCVLGLGLMLL 155 (381)
Q Consensus 98 ~~~~~al~-~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~----~gi~l~~~Gv~l~~~ 155 (381)
.+++.+.+ +.+++.+.++.+..|+...+++.+++||+.+++|+ +|..+.+.|+.++..
T Consensus 226 ~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 226 FFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 88889999 99999999999999999999999999999999999 999999999988753
No 60
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.09 E-value=0.00019 Score=66.58 Aligned_cols=133 Identities=28% Similarity=0.292 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHH-HHHHHHHHHHHHHHHhhh--ccchhhHHHHHHHHHHHHH-H
Q 016869 21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSV-LCYLSLALAYGGILLYRR--QRLQVSWYWYLLLGFVDVQ-G 96 (381)
Q Consensus 21 ~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~-~ 96 (381)
...+...+.+.+++++......+.+. ..++..... +..........+...... ......+......|++... +
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~ 228 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLS---RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLA 228 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHH
Confidence 45666777777777776665655554 234444444 333322222222222211 2234567777777887775 5
Q ss_pred HHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869 97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS 156 (381)
Q Consensus 97 ~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~ 156 (381)
..+++.+++..+++..+++..+.|++..++++++++|+++..+++|+.+.+.|+.+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 788899999999999999999999999999999999999999999999999999988654
No 61
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.07 E-value=0.00016 Score=69.74 Aligned_cols=134 Identities=13% Similarity=0.032 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCchhHHHHHHHHHHHHHHHHHHHhhhc-cc-----------hh-h
Q 016869 21 TLYLLLLGQLVSFSLALSSFTTAVITDLG-----VDAPITQSVLCYLSLALAYGGILLYRRQ-RL-----------QV-S 82 (381)
Q Consensus 21 ~~~~~~~~~l~a~~~~~~~~~~~~l~~~~-----~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~-----------~~-~ 82 (381)
.+.|.+++.+.+++++.-+..++.+.+.. ..++.....+-..+++++++|+...... .. .. .
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 35677777777777777777777665432 2345555555567788777776542211 00 00 1
Q ss_pred HHHHHHHHHHHHHH----HHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869 83 WYWYLLLGFVDVQG----NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML 154 (381)
Q Consensus 83 ~~~~~~~g~~~~~~----~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~ 154 (381)
+...+...+..... |...+++++.+++...++...+.|+++.++++++++|+++..+++|..+++.|+.+..
T Consensus 272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 11111112222222 3334579999999999999999999999999999999999999999999999998764
No 62
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.01 E-value=0.0002 Score=56.98 Aligned_cols=63 Identities=14% Similarity=0.186 Sum_probs=53.3
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheec
Q 016869 282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST 344 (381)
Q Consensus 282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~ 344 (381)
...++.++..++++.+..++-....+.++++.+++++++||++++.+++|..+++.|+++...
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 344567888999997777776555588899999999999999999999999999999987643
No 63
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.92 E-value=1.3e-06 Score=77.02 Aligned_cols=269 Identities=14% Similarity=0.139 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc-chhhHHHHHHHHHHHHHHHHHHHH
Q 016869 24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR-LQVSWYWYLLLGFVDVQGNFLFNK 102 (381)
Q Consensus 24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~ 102 (381)
.++++++-++.|+.....+.+.. .+|..++.--.+.+.++-+...+...+. ..+.+..-++.|.+...++...+.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfk 78 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQFK 78 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhhh
Confidence 45667777777777665554443 3577776655544444443333333332 233444556667777777888899
Q ss_pred HhhccchhhHHHhhc-ChhHHHHHHHHHHhcccccHHH----HHHHHHHHhhhHHhhccccc-ccCCCCCcchhHHHHHH
Q 016869 103 AFQFTSISSVTLLDC-CAIPCAIVFTWVFLGTRYSVWQ----LFGASLCVLGLGLMLLSDAE-MAGGGGSRPLLGDILVI 176 (381)
Q Consensus 103 al~~~~~~~~~il~~-~~pi~~~lls~~~l~er~~~~~----~~gi~l~~~Gv~l~~~~~~~-~~~~~~~~~~~G~ll~l 176 (381)
|.++.+++.+..+.+ ++-+-+.+++.+.++|=.+..| .+++.+.++|+.+....|.. .+.++.++...|....+
T Consensus 79 a~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~ 158 (288)
T COG4975 79 AIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILL 158 (288)
T ss_pred heeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeee
Confidence 999999988876654 4567788899999999888755 45677788898888887652 22333344567888888
Q ss_pred HHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccch
Q 016869 177 AGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRST 256 (381)
Q Consensus 177 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 256 (381)
.+.+.|-.|.+..+.. +.|..+...-+. .|.++..+.. ..
T Consensus 159 iSt~GYv~yvvl~~~f--~v~g~saiLPqA-iGMv~~ali~-------------------------------------~~ 198 (288)
T COG4975 159 ISTLGYVGYVVLFQLF--DVDGLSAILPQA-IGMVIGALIL-------------------------------------GF 198 (288)
T ss_pred eeccceeeeEeeeccc--cccchhhhhHHH-HHHHHHHHHH-------------------------------------hh
Confidence 9999999999977755 345554444444 5666654332 11
Q ss_pred hcc-ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcch-hhHHHHHhHHHHHHHHHHHHHhhcccccHHH----HH
Q 016869 257 LEL-KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSG-ATMLILSVLTSDMWAVILRIFCYHQQVNWTY----YL 330 (381)
Q Consensus 257 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~----~i 330 (381)
... ..+....|.. +..+.....++..+..+-++.+ ++--+++.... +.+.+=+.++++|+-|..| ++
T Consensus 199 ~~~~~~~~K~t~~n------ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgV-iisTiGGIl~L~ekKtkkEm~~v~i 271 (288)
T COG4975 199 FKMEKRFNKYTWLN------IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGV-IISTIGGILFLGEKKTKKEMVYVII 271 (288)
T ss_pred cccccchHHHHHHH------HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhhee-eeeecceEEEEeccCchhhhhhhhh
Confidence 111 1111111111 1112223344455555555543 34444555555 8899999999999998866 45
Q ss_pred HHHHHHhhhhhee
Q 016869 331 AFAAVLIGLIIYS 343 (381)
Q Consensus 331 G~~lil~G~~l~~ 343 (381)
|.++++.|..+..
T Consensus 272 Giilivvgai~lg 284 (288)
T COG4975 272 GIILIVVGAILLG 284 (288)
T ss_pred hHHHHHHHhhhhh
Confidence 7888888776654
No 64
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.92 E-value=8.4e-05 Score=59.37 Aligned_cols=65 Identities=18% Similarity=0.294 Sum_probs=56.0
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCC
Q 016869 282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~ 347 (381)
....+.++.++.++.++ .+.....+.|+++.+++++++||+++..+++|.+++++|+.+....+.
T Consensus 45 ~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 45 FGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 33567899999999776 555777778999999999999999999999999999999999887553
No 65
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.59 E-value=0.00071 Score=54.32 Aligned_cols=64 Identities=8% Similarity=0.269 Sum_probs=48.8
Q ss_pred HHHHHHHhhhhcchhhHH-HHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCC
Q 016869 284 MFYTLVPFVLKLSGATML-ILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 284 ~~~~l~~~~l~~~~a~~~-~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~ 347 (381)
..+.++..++++.+..++ ++..-+-.+.+.+.++++|||++|+.+++|..++++|++..+...+
T Consensus 42 ~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 42 LSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 344677778888443333 3333344588899999999999999999999999999999876554
No 66
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.57 E-value=0.00041 Score=56.68 Aligned_cols=71 Identities=18% Similarity=0.275 Sum_probs=59.6
Q ss_pred HHHHHHHHHHH-HHHHHHHhhccchhhHHHhhcChhHHHHHHHHH--HhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869 86 YLLLGFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWV--FLGTRYSVWQLFGASLCVLGLGLMLLS 156 (381)
Q Consensus 86 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~--~l~er~~~~~~~gi~l~~~Gv~l~~~~ 156 (381)
++..|+..... ..++.++++..+++.+..+.+..++.+.+.++. ++||++++.|++|+.+.++|+.++..+
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 34455555554 677799999999999998888888888888875 899999999999999999999998765
No 67
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.55 E-value=0.0025 Score=60.58 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869 275 FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD 348 (381)
Q Consensus 275 ~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~ 348 (381)
++..+..-+.++.++..+.++.+.+-+.+......++++++++++++++.++.+++|+.+++.|+.+....+..
T Consensus 82 y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~ 155 (334)
T PF06027_consen 82 YFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL 155 (334)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence 44445567888899999999999888888888888999999999999999999999999999999988876643
No 68
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.46 E-value=0.0033 Score=49.55 Aligned_cols=69 Identities=16% Similarity=0.239 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhh-HHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHh
Q 016869 85 WYLLLGFVDVQGNFLFNKAFQFTSISS-VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM 153 (381)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~al~~~~~~~-~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~ 153 (381)
.....-.......++...++++.|.+. +++......+.+.+.+.+++||++++.|++|+.+.+.|++.+
T Consensus 37 ~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 37 YGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 333434444445667789999999954 467777888999999999999999999999999999999875
No 69
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.35 E-value=0.0082 Score=56.65 Aligned_cols=133 Identities=15% Similarity=0.100 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHh--hhc---------cchhhHHHHHHHHHH
Q 016869 24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY--RRQ---------RLQVSWYWYLLLGFV 92 (381)
Q Consensus 24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~~---------~~~~~~~~~~~~g~~ 92 (381)
|+.+..+..++-+..+.....+.+....++....++.-+.+.+...+.... ... +.+..+...+....+
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 666666655556666666655555555677777777776666666554443 211 112345666777777
Q ss_pred HHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869 93 DVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS 156 (381)
Q Consensus 93 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~ 156 (381)
+..++.+.+.-.+..++-..+++..+.-+.+.+++.+++++++++.||+|+.+.+.|..+-...
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence 7778777777778888888888888899999999999999999999999999999999887665
No 70
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.33 E-value=0.0036 Score=50.29 Aligned_cols=71 Identities=14% Similarity=0.190 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhHH-HhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 87 LLLGFVDVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 87 ~~~g~~~~~~~~~~~~al~~~~~~~~~-il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
.+.-.+.....++...++++.|.+.+. +......+.+.+.+.++++|++++.|++|+.+.++|++.+-..+
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 333344444567778999999997664 44678899999999999999999999999999999999886543
No 71
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.30 E-value=0.0039 Score=48.48 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHhhccchh-hHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhc
Q 016869 90 GFVDVQGNFLFNKAFQFTSIS-SVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL 155 (381)
Q Consensus 90 g~~~~~~~~~~~~al~~~~~~-~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~ 155 (381)
-++.....++.-.++++.|.+ .+++......+.+.+.+++++||+++..+++++.+.+.|++.+-.
T Consensus 37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 333344466668999999995 557888889999999999999999999999999999999988743
No 72
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.27 E-value=0.0031 Score=49.94 Aligned_cols=63 Identities=8% Similarity=0.074 Sum_probs=47.7
Q ss_pred HHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869 284 MFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 284 ~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~ 346 (381)
..+.++..++++.+.. .-++..-...+.+.+.++++|||++++.+++|..+++.|+++.+...
T Consensus 42 ~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 42 ASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3446667788884433 33343434448889999999999999999999999999999987654
No 73
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.27 E-value=0.0057 Score=47.93 Aligned_cols=68 Identities=16% Similarity=0.099 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhh-HHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869 87 LLLGFVDVQGNFLFNKAFQFTSISS-VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML 154 (381)
Q Consensus 87 ~~~g~~~~~~~~~~~~al~~~~~~~-~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~ 154 (381)
+..-.+.....++...+++..|.+. +++-.....+.+.+.+.+++||++++.|++|+.+.++|++.+-
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3333344444667789999999954 4677778999999999999999999999999999999999873
No 74
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.26 E-value=0.0018 Score=60.82 Aligned_cols=60 Identities=15% Similarity=0.177 Sum_probs=44.3
Q ss_pred HHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869 287 TLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 287 ~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~ 346 (381)
.+-..++...++.+..-.....-++..+++..++||+++..++.|+.+++.|..+.....
T Consensus 65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 333446666444444433444558999999999999999999999999999988766543
No 75
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.17 E-value=0.0075 Score=47.74 Aligned_cols=64 Identities=16% Similarity=0.307 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhhccchhhHH-HhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869 93 DVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS 156 (381)
Q Consensus 93 ~~~~~~~~~~al~~~~~~~~~-il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~ 156 (381)
.....++...+++..|.+.+. +......+.+.+.+++++||++++.|++|+.+.++|++.+-..
T Consensus 40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 333456668899999996654 5567888999999999999999999999999999999998544
No 76
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.15 E-value=0.0058 Score=56.00 Aligned_cols=64 Identities=11% Similarity=0.091 Sum_probs=56.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHH
Q 016869 80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGA 143 (381)
Q Consensus 80 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi 143 (381)
++..++-++.|++...+|.+++.|.+..+.+.+-.+.++.++...+.+.+++||+-+++++..+
T Consensus 192 ~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~ 255 (269)
T PF06800_consen 192 EKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYT 255 (269)
T ss_pred ccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHH
Confidence 3445567888999999999999999999999999999999999999999999999998876543
No 77
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.07 E-value=0.012 Score=52.74 Aligned_cols=104 Identities=13% Similarity=-0.008 Sum_probs=75.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHH---HHHHHHHHHHHHHH-HHHhhccchhhHHHhhcChhHHHHHH
Q 016869 51 DAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWY---LLLGFVDVQGNFLF-NKAFQFTSISSVTLLDCCAIPCAIVF 126 (381)
Q Consensus 51 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~-~~al~~~~~~~~~il~~~~pi~~~ll 126 (381)
.+.-.-...-+.+++++.+|+........-.++..+ +..+++.....+.. ..++...|......+.++.|.+.++.
T Consensus 174 ~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~ 253 (292)
T COG5006 174 EHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALS 253 (292)
T ss_pred CCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHH
Confidence 344455667888999999998775543322222111 22233333333333 78999999999999999999999999
Q ss_pred HHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869 127 TWVFLGTRYSVWQLFGASLCVLGLGLML 154 (381)
Q Consensus 127 s~~~l~er~~~~~~~gi~l~~~Gv~l~~ 154 (381)
++++++|+++..||+++...+.+.+=..
T Consensus 254 G~i~L~e~ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 254 GLIFLGETLTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999998887766443
No 78
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.94 E-value=0.028 Score=46.44 Aligned_cols=124 Identities=19% Similarity=0.231 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-c---c-hhhHHHHHHHHHHHHHHHHHHH
Q 016869 27 LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-R---L-QVSWYWYLLLGFVDVQGNFLFN 101 (381)
Q Consensus 27 ~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~---~-~~~~~~~~~~g~~~~~~~~~~~ 101 (381)
++.+...+.+..+.....+.+. ..+|...++..+....+.+..+....++ . . +.+| +...-|+++...-....
T Consensus 5 la~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~-w~~lGG~lG~~~V~~~~ 82 (138)
T PF04657_consen 5 LALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPW-WAYLGGLLGVFFVLSNI 82 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCCh-HHhccHHHHHHHHHHHH
Confidence 3344444445555566666654 2368999999999988888776654443 1 2 2344 44557888877777778
Q ss_pred HHhhccchhhHH-HhhcChhHHHHHHHHH----HhcccccHHHHHHHHHHHhhhHH
Q 016869 102 KAFQFTSISSVT-LLDCCAIPCAIVFTWV----FLGTRYSVWQLFGASLCVLGLGL 152 (381)
Q Consensus 102 ~al~~~~~~~~~-il~~~~pi~~~lls~~----~l~er~~~~~~~gi~l~~~Gv~l 152 (381)
......+++... ....-+.+...++.++ .-|++++++|.+|+.+.++|+.+
T Consensus 83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 888888885554 3445555666666654 35799999999999999999864
No 79
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.93 E-value=0.0081 Score=46.75 Aligned_cols=63 Identities=13% Similarity=0.188 Sum_probs=48.8
Q ss_pred HHHHHHHhhhhcch-hhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869 284 MFYTLVPFVLKLSG-ATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 284 ~~~~l~~~~l~~~~-a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~ 346 (381)
..|.+...++|+.+ .+.-++..-.-.+.+.+.++++|||+.++.+++|..+++.|++..+..+
T Consensus 42 ~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 42 LSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 34466677888844 3333445555558899999999999999999999999999999887643
No 80
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.88 E-value=0.053 Score=44.83 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccccc
Q 016869 171 GDILVIAGAIFFAMSYVGEEFLVKKID-RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIP 249 (381)
Q Consensus 171 G~ll~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (381)
..+++++++..-++....+.++.++.+ +..........+.+...+..
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~-------------------------------- 49 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIIL-------------------------------- 49 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence 357889999999999999999988876 77777666666666654332
Q ss_pred CCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHH-HHhHHHHHHHHHHHHH----hhcccc
Q 016869 250 LPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLI-LSVLTSDMWAVILRIF----CYHQQV 324 (381)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~-~~~~~~pv~a~i~~~~----~~~e~~ 324 (381)
...+..+..... ...|..+++-.. ...+-......+++.++..+. ....-+-+.+.+++.+ .-++++
T Consensus 50 -----~~~~~~~~~~~~--~~p~w~~lGG~l-G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~ 121 (138)
T PF04657_consen 50 -----LITGRPSLASLS--SVPWWAYLGGLL-GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPF 121 (138)
T ss_pred -----HHhcccccchhc--cCChHHhccHHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCC
Confidence 111111222111 112333334333 222335556677776665554 4555666888888876 455789
Q ss_pred cHHHHHHHHHHHhhhhh
Q 016869 325 NWTYYLAFAAVLIGLII 341 (381)
Q Consensus 325 t~~~~iG~~lil~G~~l 341 (381)
++.+++|.++++.|+++
T Consensus 122 ~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 122 SLRRILGLALMIAGVIL 138 (138)
T ss_pred CHHHHHHHHHHHHHHhC
Confidence 99999999999999864
No 81
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.87 E-value=0.012 Score=46.18 Aligned_cols=61 Identities=16% Similarity=0.133 Sum_probs=46.9
Q ss_pred HHHHHHhhhhcch-hhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecC
Q 016869 285 FYTLVPFVLKLSG-ATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT 345 (381)
Q Consensus 285 ~~~l~~~~l~~~~-a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~ 345 (381)
.+.+...++|+.+ +..-++..-.-.+.+.+.++++|||++++.+++|..+++.|++..+..
T Consensus 42 sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 42 SMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 3456667777733 333344444555889999999999999999999999999999987653
No 82
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.85 E-value=0.025 Score=44.64 Aligned_cols=59 Identities=10% Similarity=0.099 Sum_probs=45.6
Q ss_pred HHHHHHhhhhcch-hhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhee
Q 016869 285 FYTLVPFVLKLSG-ATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS 343 (381)
Q Consensus 285 ~~~l~~~~l~~~~-a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~ 343 (381)
.+.+...++|+.+ ...-++..-.-.+.+.+.++++|||++++.+++|..+++.|++..+
T Consensus 48 sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 48 AFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4466677787733 3333444445558889999999999999999999999999998764
No 83
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.77 E-value=0.018 Score=54.81 Aligned_cols=145 Identities=17% Similarity=0.111 Sum_probs=90.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869 167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA 246 (381)
Q Consensus 167 ~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 246 (381)
+...|.++.+++++|++...+-+|+ .|+-+ .|.. |. ..+. +..+. .|+...++.++
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~-wE~~-W~-v~gi-~~wl~-~~~~~g~~~~~------------------ 59 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS-WETM-WS-VGGI-FSWLI-LPWLIAALLLP------------------ 59 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCc-hhHH-HH-HHHH-HHHHH-HHHHHHHHHhh------------------
Confidence 4568999999999999999998887 44333 3444 32 2233 32222 24433333222
Q ss_pred cccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcccc-
Q 016869 247 FIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQQV- 324 (381)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e~~- 324 (381)
...+. ..+. +...+......+.....++..+..++++.+.. ..++..-+.-+.+.+++.+++||-.
T Consensus 60 --------~f~~~--~~~~--~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~ 127 (345)
T PRK13499 60 --------DFWAY--YSSF--SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDV 127 (345)
T ss_pred --------hHHHH--HHhc--CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccccc
Confidence 11111 1111 22222222222333566778899999996644 5557777777999999999999754
Q ss_pred ------cHHHHHHHHHHHhhhhheecCCC
Q 016869 325 ------NWTYYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 325 ------t~~~~iG~~lil~G~~l~~~~~~ 347 (381)
...-++|.+++++|+.+..+...
T Consensus 128 ~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 128 LLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 23577899999999999988443
No 84
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.65 E-value=0.011 Score=53.81 Aligned_cols=66 Identities=21% Similarity=0.191 Sum_probs=41.8
Q ss_pred HHHHHHHhhhhcchhhHHHH-HhHHHHHHHHHHHHH-hhcccc-----cHHHHHHHHHHHhhhhheecCCCCC
Q 016869 284 MFYTLVPFVLKLSGATMLIL-SVLTSDMWAVILRIF-CYHQQV-----NWTYYLAFAAVLIGLIIYSTTAKDL 349 (381)
Q Consensus 284 ~~~~l~~~~l~~~~a~~~~~-~~~~~pv~a~i~~~~-~~~e~~-----t~~~~iG~~lil~G~~l~~~~~~~~ 349 (381)
.++.+..-+++..+-.+... .....-+.+-..+-+ +||++. .+..++|.+++++|..++..-+.+.
T Consensus 67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 34445555677766555553 334454555555544 565543 4579999999999999998755443
No 85
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.52 E-value=0.025 Score=51.58 Aligned_cols=68 Identities=7% Similarity=0.176 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869 282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL 349 (381)
Q Consensus 282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~ 349 (381)
-...+.+.+.++++.++.+-.+......+++.+++++++|.+++..||++..+..+|+.+.+......
T Consensus 27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 44566788889999999999999999999999999999999999999999999999999998866554
No 86
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.29 E-value=0.0044 Score=55.84 Aligned_cols=60 Identities=12% Similarity=0.184 Sum_probs=52.8
Q ss_pred HHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869 287 TLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 287 ~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~ 346 (381)
.+.++++++.+-.-+++.....|+++.++++.+++|+.|..+.+|..+.+.|+++..+..
T Consensus 112 mlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 112 MLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred HHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 455667788777777877888899999999999999999999999999999999998755
No 87
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=96.19 E-value=1.2 Score=42.21 Aligned_cols=111 Identities=16% Similarity=0.249 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccchhhHH-HhhcChhHHHHHHHHHHhc-------ccccHHHHHHHHHHHhhhHH
Q 016869 81 VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLG-------TRYSVWQLFGASLCVLGLGL 152 (381)
Q Consensus 81 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~-il~~~~pi~~~lls~~~l~-------er~~~~~~~gi~l~~~Gv~l 152 (381)
.......+.|++-..+...+-.+..|...+..+ +...+.-++-.++-.++.+ ++-.....+|++++++|+++
T Consensus 71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai 150 (344)
T PF06379_consen 71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI 150 (344)
T ss_pred hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence 345566777888888888887888887775432 3233333333344333322 33345788999999999999
Q ss_pred hhccccc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 016869 153 MLLSDAE-----MAGGGGSRPLLGDILVIAGAIFFAMSYVGEEF 191 (381)
Q Consensus 153 ~~~~~~~-----~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~ 191 (381)
....+.. +++..+.+...|.++++++++..|..++-.+.
T Consensus 151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~a 194 (344)
T PF06379_consen 151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDA 194 (344)
T ss_pred HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHc
Confidence 9876543 11122234468999999999999999886654
No 88
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.11 E-value=0.045 Score=41.93 Aligned_cols=55 Identities=15% Similarity=0.151 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhhccchhhH-HHhhcChhHHHHHHHHHHhcccccHHHHHHHHHH
Q 016869 92 VDVQGNFLFNKAFQFTSISSV-TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLC 146 (381)
Q Consensus 92 ~~~~~~~~~~~al~~~~~~~~-~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~ 146 (381)
+.....++...++++.|.+.+ .+......+.+.+.+..++||+++..|+.|+.+.
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 334445667899999999766 5566789999999999999999999999998763
No 89
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.03 E-value=0.028 Score=52.89 Aligned_cols=137 Identities=14% Similarity=0.125 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCchhHHHHHHHHHHHHHHH-HHHHhhhccc---------hhhHHHHHH
Q 016869 21 TLYLLLLGQLVSFSLALSSFTTAVITD--LGVDAPITQSVLCYLSLALAYG-GILLYRRQRL---------QVSWYWYLL 88 (381)
Q Consensus 21 ~~~~~~~~~l~a~~~~~~~~~~~~l~~--~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~---------~~~~~~~~~ 88 (381)
++.|+..++...+..+.-+.+.+.+.+ ....++......---++.+.++ |+.....+.. .........
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL 240 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence 566777777776666666777765553 3445666666555557777777 7655432211 111223334
Q ss_pred HHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 89 LGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 89 ~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
.+.+....|...+..+..+++-..++.....=+.+...++++++++.++.+.+|..++++|+.+-....
T Consensus 241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k 309 (316)
T KOG1441|consen 241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK 309 (316)
T ss_pred HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence 446666668888999999999999998888888888999999999999999999999999999876543
No 90
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.94 E-value=0.016 Score=45.91 Aligned_cols=69 Identities=17% Similarity=0.264 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhHHHh-hcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHh
Q 016869 85 WYLLLGFVDVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM 153 (381)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~ 153 (381)
++.+.=.++..++..+++.+...+.+.+..+ +++.=++|++.++++.+|..++++++|+.+.+.|+.+.
T Consensus 43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 4444455677778889999999999888776 58888999999988888888889999999999998764
No 91
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.66 E-value=0.36 Score=40.17 Aligned_cols=131 Identities=13% Similarity=0.123 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccc-----hhhHHHHHHHHHHHHHHH
Q 016869 23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRL-----QVSWYWYLLLGFVDVQGN 97 (381)
Q Consensus 23 ~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~ 97 (381)
..++.+.+...+....+.+...+.+.. .+|+..++..+....+.+..+.+.++++. .+..|+...-|.++...-
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~-~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~v 83 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYL-GSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFV 83 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhh
Confidence 444555555556666677777777754 37899999999988888777665543211 122334444555444443
Q ss_pred HHHHHHhhccch-hhHHHhhcChhHHHHHHHHHH----hcccccHHHHHHHHHHHhhhHHhh
Q 016869 98 FLFNKAFQFTSI-SSVTLLDCCAIPCAIVFTWVF----LGTRYSVWQLFGASLCVLGLGLML 154 (381)
Q Consensus 98 ~~~~~al~~~~~-~~~~il~~~~pi~~~lls~~~----l~er~~~~~~~gi~l~~~Gv~l~~ 154 (381)
+..........+ .....+.+.+.+..+++-.+= -+++++..+++|+++.++|+.++.
T Consensus 84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 333444455555 333344455555555544322 258889999999999999954443
No 92
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.51 E-value=0.66 Score=38.65 Aligned_cols=138 Identities=13% Similarity=0.142 Sum_probs=77.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccc
Q 016869 169 LLGDILVIAGAIFFAMSYVGEEFLVKKID-RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAF 247 (381)
Q Consensus 169 ~~G~ll~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 247 (381)
....+.+++++.+-.+..-.+.++.+..+ +.......+..|+....+..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~------------------------------ 53 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILL------------------------------ 53 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH------------------------------
Confidence 45678889999999999999998888776 44444444445555543322
Q ss_pred ccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhH-HHHHhHHHHHHHHHHHHHhhc----c
Q 016869 248 IPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATM-LILSVLTSDMWAVILRIFCYH----Q 322 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~-~~~~~~~~pv~a~i~~~~~~~----e 322 (381)
...+..+..+...+ ..|..+++-.. ...+-+.-.....+.+++. ..+...-+.+.+++++-+=+. .
T Consensus 54 -------l~~~~~~~~a~~~~-~pwW~~~GG~l-Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~ 124 (150)
T COG3238 54 -------LIKQGHPGLAAVAS-APWWAWIGGLL-GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKR 124 (150)
T ss_pred -------HHhcCCCchhhccC-CchHHHHccch-hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcC
Confidence 11111111111111 11222333222 1112123334455555443 334555566778888776555 5
Q ss_pred cccHHHHHHHHHHHhhhhheecC
Q 016869 323 QVNWTYYLAFAAVLIGLIIYSTT 345 (381)
Q Consensus 323 ~~t~~~~iG~~lil~G~~l~~~~ 345 (381)
++++..++|.+++++|+++.+..
T Consensus 125 ~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 125 PLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred CCCHHHHHHHHHHHHHHHHhccc
Confidence 78999999999999996665543
No 93
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.44 E-value=0.067 Score=40.97 Aligned_cols=53 Identities=8% Similarity=0.157 Sum_probs=28.4
Q ss_pred HHHHHHHHhhhhcchhhHH-HHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHH
Q 016869 283 FMFYTLVPFVLKLSGATML-ILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAV 335 (381)
Q Consensus 283 ~~~~~l~~~~l~~~~a~~~-~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~li 335 (381)
...+.++.+++|+.+..++ ++..-...+...+.+.++|||++|+.+++|..+|
T Consensus 40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3344677888998554444 4444455688999999999999999999999875
No 94
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.09 E-value=0.22 Score=44.60 Aligned_cols=64 Identities=14% Similarity=0.257 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhH
Q 016869 88 LLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG 151 (381)
Q Consensus 88 ~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~ 151 (381)
...+.......+....+++.+.....+...+.++++.+++.++++|+++..+++|+.+.+.|+.
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~ 220 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF 220 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence 3344444556667888899999999999999999999999999999999999999999988865
No 95
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.05 E-value=0.61 Score=41.55 Aligned_cols=77 Identities=13% Similarity=0.165 Sum_probs=65.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869 80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS 156 (381)
Q Consensus 80 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~ 156 (381)
+..|+.+.++++...+++++.+.-..+-++-.-+++..+.-+|+.+.+.++++..++.+||+|..+.+.|...=...
T Consensus 238 P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~ 314 (337)
T KOG1580|consen 238 PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD 314 (337)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence 56678889999999999999888887777766667778888999999999999999999999999998887655443
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.84 E-value=0.55 Score=43.45 Aligned_cols=120 Identities=14% Similarity=0.100 Sum_probs=82.2
Q ss_pred HHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhh---------ccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 016869 36 ALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---------QRLQVSWYWYLLLGFVDVQGNFLFNKAFQF 106 (381)
Q Consensus 36 ~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~al~~ 106 (381)
+..+.....+.+.-...++.+.+.--+..++.-.....-.. .+.+.-++.+++.+.++..++.+-++-++.
T Consensus 185 gfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~ 264 (327)
T KOG1581|consen 185 GFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIER 264 (327)
T ss_pred hhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhh
Confidence 34455555555555556666665555554444333332211 122466788899999999998887777755
Q ss_pred cchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhc
Q 016869 107 TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL 155 (381)
Q Consensus 107 ~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~ 155 (381)
-++-..+.+..+-=+++++++.+.++.++++.||.|+.+.+.|+.+=..
T Consensus 265 FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 265 FGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL 313 (327)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence 5554445555667789999999999999999999999999988876544
No 97
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.76 E-value=0.24 Score=39.20 Aligned_cols=56 Identities=11% Similarity=0.177 Sum_probs=43.7
Q ss_pred HHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhe
Q 016869 287 TLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY 342 (381)
Q Consensus 287 ~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~ 342 (381)
..|++.+++.+-+ ..++.+.+.-+++++.++++.+|..+...++|+++++.|+.+.
T Consensus 56 v~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 56 VLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 5556677775544 4446666677999999999888888999999999999998653
No 98
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=92.93 E-value=0.097 Score=46.87 Aligned_cols=66 Identities=15% Similarity=0.170 Sum_probs=51.2
Q ss_pred HHHHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcccccHHHHH----HHHHHHhhhhheecCCC
Q 016869 282 SFMFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQQVNWTYYL----AFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 282 ~~~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~i----G~~lil~G~~l~~~~~~ 347 (381)
...+|...+++++..+.. ..+++.-++-+-+.+++++.|||..+..+++ ..++++.|..+..+.++
T Consensus 69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 556778999999996655 4457888888889999999999999887654 45677788877766554
No 99
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.90 E-value=0.41 Score=45.54 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869 273 LSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL 349 (381)
Q Consensus 273 ~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~ 349 (381)
-.-+.+++..+.++..++.+++..+..-..+...+.-+|+..++..+-+|++|+...++..+-+.|+++....+.++
T Consensus 160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 34555666688899999999999766655655555559999999999999999999999999999999999887655
No 100
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.43 E-value=0.13 Score=46.68 Aligned_cols=148 Identities=14% Similarity=0.115 Sum_probs=98.9
Q ss_pred ccccchh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc--------cc
Q 016869 11 WSGRSQM---ALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--------RL 79 (381)
Q Consensus 11 ~~~~~~~---~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--------~~ 79 (381)
|-|-+|. ..-.+.|+++|.+.++..+.-+..++.........-+.++++.-+.+.++++|....... +.
T Consensus 170 ~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l 249 (347)
T KOG1442|consen 170 GLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHL 249 (347)
T ss_pred eeccccccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccc
Confidence 3344444 334578999999999888888777764444344456778888888899988887664321 11
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 80 --QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 80 --~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
.+.|..+.+.|++++..++...+=++.+++-...+=....-..-.+++..+++|..+...|-+..+.++|..+-....
T Consensus 250 ~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 250 PAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred hHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence 234555556666666666665555566666333332233345556788899999999999988888888887776654
Q ss_pred c
Q 016869 158 A 158 (381)
Q Consensus 158 ~ 158 (381)
.
T Consensus 330 ~ 330 (347)
T KOG1442|consen 330 E 330 (347)
T ss_pred H
Confidence 3
No 101
>PRK02237 hypothetical protein; Provisional
Probab=91.85 E-value=3.8 Score=31.95 Aligned_cols=41 Identities=22% Similarity=0.703 Sum_probs=34.7
Q ss_pred cChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 117 CCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 117 ~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
....+.+.+..+..-|+|+++..++|..++++|+.++...+
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 34456667888999999999999999999999999887653
No 102
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.84 E-value=1.1 Score=42.30 Aligned_cols=147 Identities=15% Similarity=0.122 Sum_probs=77.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccc
Q 016869 166 SRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPF 245 (381)
Q Consensus 166 ~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~ 245 (381)
+.-..|.++-.+++++.+.+.+=.||. |+-+...+=..+++++-++. |.......+|
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swli~-----P~~~a~l~ip----------------- 59 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWLIV-----PWLWALLAIP----------------- 59 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHHHH-----HHHHHHHhCC-----------------
Confidence 345689999999999999999966654 33332222222333333332 5444333333
Q ss_pred ccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhc---
Q 016869 246 AFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYH--- 321 (381)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~--- 321 (381)
+..+. +.+.+.+...+..+.+ .....+...+-.++|+.+-. ..++..-+.-+++.++.-++.|
T Consensus 60 ---------~~~~i--~~~~~~~~l~~~~l~G--~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~ 126 (344)
T PF06379_consen 60 ---------DFFSI--YSATPASTLFWTFLFG--VLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFD 126 (344)
T ss_pred ---------cHHHH--HHhCChhHHHHHHHHH--HHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccc
Confidence 11111 1111212221112222 22233335556678885533 3334444444666666545433
Q ss_pred ----ccccHHHHHHHHHHHhhhhheecCCCC
Q 016869 322 ----QQVNWTYYLAFAAVLIGLIIYSTTAKD 348 (381)
Q Consensus 322 ----e~~t~~~~iG~~lil~G~~l~~~~~~~ 348 (381)
++-....++|.+++++|+.+..+....
T Consensus 127 ~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~ 157 (344)
T PF06379_consen 127 ELLATPSGQIVLLGVAVCLIGIAICGKAGSM 157 (344)
T ss_pred ccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence 233457889999999999999876543
No 103
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.16 E-value=0.074 Score=49.47 Aligned_cols=45 Identities=18% Similarity=0.132 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869 305 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL 349 (381)
Q Consensus 305 ~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~ 349 (381)
..+..+.+.+++..+++|++++.-.+|++++++|..+......++
T Consensus 97 GAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 97 GALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 334458889999999999999999999999999988777655443
No 104
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=90.17 E-value=3.4 Score=32.13 Aligned_cols=45 Identities=22% Similarity=0.659 Sum_probs=37.6
Q ss_pred HHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 113 TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 113 ~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
+.--....+.+.+..+.+-|+|+++..++|..++++|+.++...+
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 333345567788889999999999999999999999999988764
No 105
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=88.31 E-value=0.72 Score=39.97 Aligned_cols=63 Identities=16% Similarity=0.083 Sum_probs=54.2
Q ss_pred HHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCC
Q 016869 285 FYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 285 ~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~ 347 (381)
.+.+|..++++.+++.++....-..-+..+++++++||++....++..++.+.|+++..+.+.
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 446777889998888888766666799999999999999999999999999999999887654
No 106
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=87.94 E-value=11 Score=35.18 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCchhHHHHHHHHHHHHHHHHHHHhh-hcc------------chhhHHH
Q 016869 22 LYLLLLGQLVSFSLALSSFTTAVITDLG---VDAPITQSVLCYLSLALAYGGILLYR-RQR------------LQVSWYW 85 (381)
Q Consensus 22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~---~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~------------~~~~~~~ 85 (381)
..|..+....+.+.+.=|.+++.+.+++ ..+|+...+----...+.++|..+.- +.. ....++.
T Consensus 163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv 242 (349)
T KOG1443|consen 163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRV 242 (349)
T ss_pred ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHH
Confidence 3456666666777777788888777653 35666654444334444444443321 110 0112333
Q ss_pred HHHHHHHHHHHHHH---HHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHh
Q 016869 86 YLLLGFVDVQGNFL---FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM 153 (381)
Q Consensus 86 ~~~~g~~~~~~~~~---~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~ 153 (381)
...++..+.....+ -+.=+..++.-..++..-..=+.+.+++..+.+++++-..|.|..++..|+..=
T Consensus 243 ~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 243 IGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 33333333332111 133444455533333333445788899999999999999999999999999877
No 107
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=85.36 E-value=2.6 Score=40.01 Aligned_cols=61 Identities=10% Similarity=0.135 Sum_probs=54.5
Q ss_pred HHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecC
Q 016869 285 FYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT 345 (381)
Q Consensus 285 ~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~ 345 (381)
.|.+.+.++...++.+-.+.+.+....+.+++.++++++.++.||....+...|+.+.+..
T Consensus 105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 3457777888888999999999998999999999999999999999999999999999843
No 108
>PRK02237 hypothetical protein; Provisional
Probab=82.86 E-value=11 Score=29.43 Aligned_cols=40 Identities=8% Similarity=0.022 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869 307 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 307 ~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~ 346 (381)
.-.+.++++.+.+-|++|+...++|..++++|+.+.....
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4448889999999999999999999999999998876654
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=81.58 E-value=10 Score=29.57 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869 307 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 307 ~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~ 346 (381)
.-.+.+.++++.+-|++|+...++|..++++|+.+....+
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 4458899999999999999999999999999998887754
No 110
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=79.98 E-value=7 Score=30.20 Aligned_cols=41 Identities=24% Similarity=0.622 Sum_probs=34.4
Q ss_pred cChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 117 CCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 117 ~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
....+.+.+..+..-|.|+++..|.|..++++|+.++...+
T Consensus 66 GvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 66 GVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred chHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 33456677788888999999999999999999999887764
No 111
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=72.24 E-value=44 Score=26.01 Aligned_cols=33 Identities=18% Similarity=0.438 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhcccccHHHHHHHHHHHhhhhhe
Q 016869 310 MWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY 342 (381)
Q Consensus 310 v~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~ 342 (381)
.+=+.++.+++||++++..+.|..+++.++...
T Consensus 74 ~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred heeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 334567789999999999999999998886543
No 112
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=71.69 E-value=12 Score=34.53 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=46.1
Q ss_pred HHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869 287 TLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 287 ~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~ 346 (381)
.+.+.++...+++.-.+..-...+++-+++.-+++.+++..||+|+..+.+|++..-..+
T Consensus 101 slm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d 160 (372)
T KOG3912|consen 101 SLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLD 160 (372)
T ss_pred HHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeee
Confidence 344456666555555544444558999999999999999999999999999998887653
No 113
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=71.31 E-value=44 Score=30.59 Aligned_cols=115 Identities=13% Similarity=0.192 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcC-hhHHHHHHHHH-Hhccc---c--cHHHHHHHHHHHhhhHHhh
Q 016869 82 SWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC-AIPCAIVFTWV-FLGTR---Y--SVWQLFGASLCVLGLGLML 154 (381)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~-~pi~~~lls~~-~l~er---~--~~~~~~gi~l~~~Gv~l~~ 154 (381)
...+.++-|.+...+|.+..-..+..+.+....+-++ ..+..-..+++ +++++ + ++..++|+.++++|..+..
T Consensus 54 f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 54 FYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred ceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 3445566678888889998999999999888776554 33333333332 33332 2 3568899999999988776
Q ss_pred cccccc-------c------C-------C------CC--------CcchhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 016869 155 LSDAEM-------A------G-------G------GG--------SRPLLGDILVIAGAIFFAMSYVGEEFLVKKI 196 (381)
Q Consensus 155 ~~~~~~-------~------~-------~------~~--------~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~ 196 (381)
..+... + + + .. .++..|.++++.++++|+...+=.++..++.
T Consensus 134 fik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 134 FIKSEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred eecCCCCCccccccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 522110 0 0 0 00 1367899999999999999888777665554
No 114
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=70.64 E-value=49 Score=30.63 Aligned_cols=137 Identities=13% Similarity=0.055 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH---------hhhcc-----chhhHHHH
Q 016869 21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL---------YRRQR-----LQVSWYWY 86 (381)
Q Consensus 21 ~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~---------~~~~~-----~~~~~~~~ 86 (381)
...|+.+-.+..+..+.++.......+....|+-...|+.-++....++...- ++.++ ........
T Consensus 162 w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~ 241 (330)
T KOG1583|consen 162 WLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSM 241 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHH
Confidence 34555555555556666777775555544446666666666555444432211 00010 00001111
Q ss_pred HHHHHHHHHHHHHHHHHhhc----cchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 87 LLLGFVDVQGNFLFNKAFQF----TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 87 ~~~g~~~~~~~~~~~~al~~----~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
...-+++...+++...+..- ++.=.+++...+-=.+..+++.+.++..++++.|+|..+.+.|.++-...-
T Consensus 242 ~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~ 316 (330)
T KOG1583|consen 242 WVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW 316 (330)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11223344445554333322 222234455566678899999999999999999999999999999887543
No 115
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=67.61 E-value=35 Score=26.44 Aligned_cols=40 Identities=8% Similarity=-0.062 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869 307 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 346 (381)
Q Consensus 307 ~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~ 346 (381)
+-.+.+.++.+++=|.+|+...++|.++.++|+.+.....
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 3448899999999999999999999999999988777653
No 116
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.68 E-value=26 Score=26.79 Aligned_cols=32 Identities=22% Similarity=0.465 Sum_probs=27.4
Q ss_pred HHHHHHHhhcccccHHHHHHHHHHHhhhhhee
Q 016869 312 AVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS 343 (381)
Q Consensus 312 a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~ 343 (381)
=+.++.+.++|++.+-++.|+.+++.|+.+..
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 35678999999999999999999988876654
No 117
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=62.56 E-value=72 Score=24.86 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=24.7
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHhhhHHh
Q 016869 124 IVFTWVFLGTRYSVWQLFGASLCVLGLGLM 153 (381)
Q Consensus 124 ~lls~~~l~er~~~~~~~gi~l~~~Gv~l~ 153 (381)
+.++.+++||++++.+..|-.+.+.++..+
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 577889999999999999988887666543
No 118
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=62.42 E-value=13 Score=28.96 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhHH-HhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHh
Q 016869 85 WYLLLGFVDVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM 153 (381)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~-il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~ 153 (381)
.+.+.=.++-.++.+++.-+..++.+.+. +-++++-.|+++.+..+-.|...++.++|..+.+.|+.+.
T Consensus 54 ~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 54 EYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 44444455666678888888888887665 4566677899999986555555667888888888888765
No 119
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=62.38 E-value=79 Score=29.81 Aligned_cols=75 Identities=11% Similarity=0.050 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 83 WYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
+-...+.++++...+++.++.....|+...+++....-..+.+...++.+++.++...+|+.+++.|-++-....
T Consensus 228 ~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~ 302 (314)
T KOG1444|consen 228 LVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT 302 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence 445566677777778888888888888777776666666777777777888888888888888888887776553
No 120
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=61.58 E-value=1.9e+02 Score=29.49 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=17.6
Q ss_pred HhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhe
Q 016869 304 SVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY 342 (381)
Q Consensus 304 ~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~ 342 (381)
.....|+-+.++|.+.-.-.......++++.++++.++.
T Consensus 352 ~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 352 FFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 334556667777765433333333333333333333333
No 121
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=58.61 E-value=89 Score=28.93 Aligned_cols=73 Identities=12% Similarity=0.255 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869 85 WYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157 (381)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~ 157 (381)
..++.+..+..+..+...-...-++..++.+....=..|.+++++++.+++|-....+.++.+.|+.+-..++
T Consensus 262 y~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 262 YAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 3344444444443322222233344555566666678899999999999999999999999999999988775
No 122
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=56.11 E-value=3.7 Score=37.62 Aligned_cols=20 Identities=15% Similarity=0.207 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhcchhhHHHH
Q 016869 284 MFYTLVPFVLKLSGATMLIL 303 (381)
Q Consensus 284 ~~~~l~~~~l~~~~a~~~~~ 303 (381)
...++|.+.++..+++.-.+
T Consensus 120 L~vW~Ym~lLr~~GAs~Wti 139 (381)
T PF05297_consen 120 LGVWFYMWLLRELGASFWTI 139 (381)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHHhhhHHHHH
Confidence 33356677888888876554
No 123
>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms]
Probab=54.85 E-value=69 Score=28.80 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=28.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHh-hccCChhHHH
Q 016869 166 SRPLLGDILVIAGAIFFAMSYVGEEFL-VKKIDRVEVV 202 (381)
Q Consensus 166 ~~~~~G~ll~l~a~~~~a~~~v~~~~~-~~~~~~~~~~ 202 (381)
.......+.+.++++.+..|.++.-.. +++.++.++.
T Consensus 191 ~~~~~~~vya~lgAllf~~yl~~Dtqllm~~~SPEEYI 228 (237)
T KOG2322|consen 191 YGPILVMVYAALGALLFCGYLVYDTQLLMGRISPEEYI 228 (237)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHhhhHHHhccCCHHHHH
Confidence 345567789999999999999998775 5666666554
No 124
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=53.56 E-value=23 Score=27.56 Aligned_cols=56 Identities=9% Similarity=0.050 Sum_probs=41.6
Q ss_pred HHHHhhhhcchhhHH-HHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhe
Q 016869 287 TLVPFVLKLSGATML-ILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY 342 (381)
Q Consensus 287 ~l~~~~l~~~~a~~~-~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~ 342 (381)
.+|++.++..+-+.+ .+...+...++.+.+..+-.|...-..++|..++++|+.+.
T Consensus 67 aly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 67 ALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 455566777554433 35566666888999988777777888999999999998875
No 125
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=53.45 E-value=18 Score=29.53 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=6.3
Q ss_pred HHHHHHHHHhhhh
Q 016869 328 YYLAFAAVLIGLI 340 (381)
Q Consensus 328 ~~iG~~lil~G~~ 340 (381)
.++|..+++.|++
T Consensus 89 ~i~g~~~~~~G~~ 101 (136)
T PF08507_consen 89 IIIGLLLFLVGVI 101 (136)
T ss_pred HHHHHHHHHHHHH
Confidence 3445555555543
No 126
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=47.85 E-value=2.1e+02 Score=25.79 Aligned_cols=27 Identities=15% Similarity=0.183 Sum_probs=23.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 016869 169 LLGDILVIAGAIFFAMSYVGEEFLVKK 195 (381)
Q Consensus 169 ~~G~ll~l~a~~~~a~~~v~~~~~~~~ 195 (381)
........++.+.++.+..+.....++
T Consensus 170 ~l~~~IS~lgvlifsgli~yDtq~I~~ 196 (233)
T COG0670 170 ALHLAISVLGVLIFSGLIAYDTQNIKR 196 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677889999999999999998887776
No 127
>PF15471 TMEM171: Transmembrane protein family 171
Probab=45.19 E-value=22 Score=32.37 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhhhhheecCCCCCC
Q 016869 326 WTYYLAFAAVLIGLIIYSTTAKDLL 350 (381)
Q Consensus 326 ~~~~iG~~lil~G~~l~~~~~~~~~ 350 (381)
..|++|-+++++|+..+...+-|++
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKKr 185 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKKR 185 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeeec
Confidence 3799999999999988876554433
No 128
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=45.06 E-value=5.2 Score=36.33 Aligned_cols=66 Identities=9% Similarity=0.071 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCC
Q 016869 282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~ 347 (381)
-+-++.+...+-++.+-+...+.-.-..+...+++|++++.+-.+.++.|.++++.|+++....+-
T Consensus 88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV 153 (336)
T KOG2766|consen 88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDV 153 (336)
T ss_pred eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeee
Confidence 334444555666666655555544444456788999999999999999999999999988877553
No 129
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=43.60 E-value=2.7e+02 Score=25.81 Aligned_cols=109 Identities=16% Similarity=0.099 Sum_probs=58.3
Q ss_pred hhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc---ccCCCCCcchhHHHHHHHHHHHHHHH
Q 016869 109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE---MAGGGGSRPLLGDILVIAGAIFFAMS 185 (381)
Q Consensus 109 ~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~---~~~~~~~~~~~G~ll~l~a~~~~a~~ 185 (381)
...-+++.......++++.+-...-|.|.+---.+..+..|+++....+.. -.....+...+|..+.+......++.
T Consensus 146 Iv~qAvl~T~~vf~~ml~lYk~g~IrvT~kf~~iv~~a~~gi~~~~Lv~~vl~lf~~~l~~~gplgI~~slv~v~iAa~s 225 (274)
T PF12811_consen 146 IVFQAVLGTFGVFAVMLALYKTGIIRVTPKFRRIVMIATFGIALFYLVNLVLSLFVGSLRDGGPLGIGFSLVVVGIAALS 225 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCeeechHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHH
Confidence 344455556566777777666655666655444444455555444332210 00013334457877777766666666
Q ss_pred HHHHHHhhcc---CChhHHHHHHHHHHHHHHHHHh
Q 016869 186 YVGEEFLVKK---IDRVEVVCMIGVYGLLVSVVQL 217 (381)
Q Consensus 186 ~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 217 (381)
.++.=...++ .+......|.+.+|..+..+.+
T Consensus 226 LllDFd~Ie~~v~~gaPk~~eW~~AfGL~vTLVWL 260 (274)
T PF12811_consen 226 LLLDFDFIEQGVRQGAPKKMEWYAAFGLLVTLVWL 260 (274)
T ss_pred HHhhHHHHHHHHHcCCChhhHHHHHHHHHHHHHHH
Confidence 5544332222 2334556676668887776544
No 130
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=43.27 E-value=2.5e+02 Score=25.30 Aligned_cols=104 Identities=12% Similarity=0.064 Sum_probs=66.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhc--------cch-hhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHH
Q 016869 53 PITQSVLCYLSLALAYGGILLYRRQ--------RLQ-VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCA 123 (381)
Q Consensus 53 p~~~~~~r~~~~~l~l~~~~~~~~~--------~~~-~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~ 123 (381)
.+.-.++.-+++..+++.+-+.... ..+ ....+.++.|++.++..+..-+-..-++.....++..+.-.-.
T Consensus 185 d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~ 264 (309)
T COG5070 185 DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPI 264 (309)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChH
Confidence 3445566666665555443332211 111 2234556667777666776667777777777778777777777
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869 124 IVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS 156 (381)
Q Consensus 124 ~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~ 156 (381)
++.+.++++|..++..+.++.++++..++-..+
T Consensus 265 alaGlvffdap~nf~si~sillGflsg~iYava 297 (309)
T COG5070 265 ALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred HHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 788888888888888888888776655554443
No 131
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=42.27 E-value=1.1e+02 Score=25.40 Aligned_cols=29 Identities=3% Similarity=0.069 Sum_probs=23.8
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 016869 166 SRPLLGDILVIAGAIFFAMSYVGEEFLVK 194 (381)
Q Consensus 166 ~~~~~G~ll~l~a~~~~a~~~v~~~~~~~ 194 (381)
.......+..++++..|.-|...+||..+
T Consensus 117 ~~~i~~l~~~li~a~IwipYf~~S~RVK~ 145 (149)
T PF10754_consen 117 AEAIRELLRSLIAAAIWIPYFLRSKRVKN 145 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Confidence 34456888999999999999999998744
No 132
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=40.32 E-value=2.9e+02 Score=25.19 Aligned_cols=43 Identities=16% Similarity=0.105 Sum_probs=21.9
Q ss_pred HHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHH
Q 016869 144 SLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187 (381)
Q Consensus 144 ~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v 187 (381)
...++|+++....+.. ..+.......|..+++++.+...++..
T Consensus 15 ~~~v~Gi~Lf~~A~~L-S~s~~FyY~sg~~lGv~~s~li~~~~~ 57 (249)
T PF10225_consen 15 AQFVLGIVLFFLAPSL-SRSVLFYYSSGISLGVLASLLILLFQL 57 (249)
T ss_pred HHHHHHHHHHHHhHHh-ccChhHHHhhhHHHHHHHHHHHHHHHH
Confidence 4455666666655431 112222334566666666666555544
No 133
>PF15345 TMEM51: Transmembrane protein 51
Probab=39.60 E-value=14 Score=33.05 Aligned_cols=24 Identities=8% Similarity=0.026 Sum_probs=17.3
Q ss_pred HHHHHHHhhhhheecCCCCCCCCc
Q 016869 330 LAFAAVLIGLIIYSTTAKDLLPIP 353 (381)
Q Consensus 330 iG~~lil~G~~l~~~~~~~~~~~~ 353 (381)
.|+++.++++++-.+.++|+++..
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq~~ 90 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQGE 90 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 477888888888888776655443
No 134
>cd06181 BI-1-like BAX inhibitor (BI)-1 like protein family. Mammalian members of this family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well characterized oncogene, or inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, E.coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.
Probab=36.51 E-value=2.9e+02 Score=24.12 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhc
Q 016869 169 LLGDILVIAGAIFFAMSYVGEEFLVK 194 (381)
Q Consensus 169 ~~G~ll~l~a~~~~a~~~v~~~~~~~ 194 (381)
....+...++.+.++.+.++.-+..+
T Consensus 150 ~~~~~~~~~g~~lf~~~l~~Dtq~i~ 175 (212)
T cd06181 150 ALQLAISALGVLLFSGYILYDTQLII 175 (212)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34557778888888888888776554
No 135
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=36.45 E-value=45 Score=33.36 Aligned_cols=24 Identities=4% Similarity=0.059 Sum_probs=19.6
Q ss_pred ccHHHHHHHHHHHhhhhheecCCC
Q 016869 324 VNWTYYLAFAAVLIGLIIYSTTAK 347 (381)
Q Consensus 324 ~t~~~~iG~~lil~G~~l~~~~~~ 347 (381)
++..|++...++++|+++..+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 788999999999999887765443
No 136
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=33.89 E-value=1.4e+02 Score=20.15 Aligned_cols=45 Identities=20% Similarity=0.343 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 016869 138 WQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVK 194 (381)
Q Consensus 138 ~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~ 194 (381)
...+|..+.++|++++..++. |.+..+++-...|......|+..+
T Consensus 4 v~v~G~~lv~~Gii~~~lPGp------------G~l~i~~GL~iLa~ef~wArr~l~ 48 (53)
T PF09656_consen 4 VGVLGWVLVVAGIIMLPLPGP------------GLLVIFLGLAILATEFPWARRLLR 48 (53)
T ss_pred hhhHHHHHHHHHHHhhcCCCC------------cHHHHHHHHHHHHHhhHHHHHHHH
Confidence 356788899999999887732 556677777777777776666554
No 137
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=33.85 E-value=6.4e+02 Score=27.27 Aligned_cols=141 Identities=13% Similarity=0.129 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcc
Q 016869 54 ITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGT 133 (381)
Q Consensus 54 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~e 133 (381)
..+..+|..++++.+ ..+.|+...+......++.|++...+.+.........=.-.... -|+...-+..++-++
T Consensus 93 ~~~~~lk~~lag~~~--~~~l~~~~~~~~~~~~~i~s~~Yafsg~~~~~~~~~~fld~~i~----lPL~llgie~~~~~~ 166 (843)
T PF09586_consen 93 LLLIILKIGLAGLFF--YLYLRKFKKSRSDWAALIGSLLYAFSGYVIYYSFNIMFLDAMIL----LPLLLLGIERLLKEK 166 (843)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH----HHHHHHHHHHHHhcC
Q ss_pred cccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH
Q 016869 134 RYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVS 213 (381)
Q Consensus 134 r~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (381)
|..+....-.+..+ .+.-.|...++...+-+-.... .+...+.....-......+.|..++
T Consensus 167 k~~~~~~~~~l~~i------------------~nfYf~ym~~if~~iY~~~r~~-~~~~k~~~~~~~~~~~~~ilg~~ls 227 (843)
T PF09586_consen 167 KWWLFIISLALALI------------------SNFYFAYMICIFLVIYFLIRYF-FKNWKNFFKKILRFIGSSILGVGLS 227 (843)
T ss_pred CcchhHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHhhc
Q 016869 214 VVQLYP 219 (381)
Q Consensus 214 ~~~~~p 219 (381)
.+..+|
T Consensus 228 a~~llP 233 (843)
T PF09586_consen 228 AFLLLP 233 (843)
T ss_pred HHHHHH
No 138
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=33.22 E-value=14 Score=33.98 Aligned_cols=82 Identities=16% Similarity=0.199 Sum_probs=0.0
Q ss_pred hhHHHhhcChhHHHHHHH--HHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHH
Q 016869 110 SSVTLLDCCAIPCAIVFT--WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187 (381)
Q Consensus 110 ~~~~il~~~~pi~~~lls--~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v 187 (381)
+...++++...+.+.++- .+|-|+-+-+...+++++..+-..+...-. ..+...+.|.++.++.. ..|+...
T Consensus 50 ~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~t-----LtGQ~LF~Gi~~l~l~~-lLaL~vW 123 (381)
T PF05297_consen 50 GALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWT-----LTGQTLFVGIVILFLCC-LLALGVW 123 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHH-----hhccHHHHHHHHHHHHH-HHHHHHH
Confidence 333445555444333322 333344455667777766655444443322 23345567765444332 2333333
Q ss_pred HHHHhhccCC
Q 016869 188 GEEFLVKKID 197 (381)
Q Consensus 188 ~~~~~~~~~~ 197 (381)
..-.+.+++.
T Consensus 124 ~Ym~lLr~~G 133 (381)
T PF05297_consen 124 FYMWLLRELG 133 (381)
T ss_dssp ----------
T ss_pred HHHHHHHHhh
Confidence 3333444443
No 139
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=30.33 E-value=2.6e+02 Score=24.32 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016869 25 LLLGQLVSFSLALSSFTTAV 44 (381)
Q Consensus 25 ~~~~~l~a~~~~~~~~~~~~ 44 (381)
+++.-+.+++.+.++++.+.
T Consensus 102 Ll~lg~~aLlsgitaff~~n 121 (226)
T COG4858 102 LLFLGAMALLSGITAFFQKN 121 (226)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 33344455666666666544
No 140
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=29.51 E-value=4e+02 Score=26.50 Aligned_cols=13 Identities=8% Similarity=0.158 Sum_probs=5.9
Q ss_pred HHHHHHHHhhhhh
Q 016869 329 YLAFAAVLIGLII 341 (381)
Q Consensus 329 ~iG~~lil~G~~l 341 (381)
+.|+..++.+++.
T Consensus 417 ~~~~~~~i~~~~~ 429 (476)
T PLN00028 417 LMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHH
Confidence 3454555444433
No 141
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=28.41 E-value=6e+02 Score=25.24 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=18.0
Q ss_pred HHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869 122 CAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS 156 (381)
Q Consensus 122 ~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~ 156 (381)
+..+++.++.+-|.. .+..-..+-+|++++...
T Consensus 6 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~ 38 (433)
T PRK09412 6 LIIVLLAIFLGARLG--GIGIGFAGGLGVLILTFI 38 (433)
T ss_pred HHHHHHHHHHhHhhh--HHHHHHHHHHHHHHHHHh
Confidence 345677788887762 222223345566665543
No 142
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=27.21 E-value=2.6e+02 Score=21.04 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=34.9
Q ss_pred HHhcccccHHHHHHHHHH------HhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 016869 129 VFLGTRYSVWQLFGASLC------VLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKK 195 (381)
Q Consensus 129 ~~l~er~~~~~~~gi~l~------~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~ 195 (381)
+--+|++|++.++|=.+. ..|++++..+|. + .=.+.++.+++.-+.|..+...+.|+
T Consensus 24 L~s~Epit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl---------~-plAv~GlgsalGI~G~q~vE~~lrr~ 86 (89)
T PF04550_consen 24 LASNEPITLRLFIGRVILGSAVSVVAGAALIQFPDL---------P-PLAVIGLGSALGIAGYQAVEAWLRRR 86 (89)
T ss_pred HccCCCCchhHHhHHHHHhhHHHHHHHHHHhcCCCC---------C-HHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 344788888766654443 344455555532 1 12256778888888888877766554
No 143
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=24.74 E-value=4.7e+02 Score=22.83 Aligned_cols=17 Identities=24% Similarity=0.624 Sum_probs=7.9
Q ss_pred hhhHHHHHHHHHHHHHH
Q 016869 80 QVSWYWYLLLGFVDVQG 96 (381)
Q Consensus 80 ~~~~~~~~~~g~~~~~~ 96 (381)
|..+++.+..+......
T Consensus 143 r~~~~k~~~~~~~~~~~ 159 (206)
T PF06570_consen 143 RPSWWKYILISVLAMVL 159 (206)
T ss_pred ccHHHHHHHHHHHHHHH
Confidence 44455555444444443
No 144
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=24.45 E-value=4.8e+02 Score=22.79 Aligned_cols=25 Identities=24% Similarity=0.289 Sum_probs=19.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHh
Q 016869 168 PLLGDILVIAGAIFFAMSYVGEEFL 192 (381)
Q Consensus 168 ~~~G~ll~l~a~~~~a~~~v~~~~~ 192 (381)
..-+....++|+++++++..+.||.
T Consensus 177 ~l~~~~~iiig~i~~~~~~~lkkk~ 201 (206)
T PF06570_consen 177 VLPPWVYIIIGVIAFALRFYLKKKY 201 (206)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3446677899999999998877765
No 145
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=24.22 E-value=6.3e+02 Score=24.12 Aligned_cols=11 Identities=0% Similarity=0.002 Sum_probs=4.5
Q ss_pred HHHHHHHhhcc
Q 016869 312 AVILRIFCYHQ 322 (381)
Q Consensus 312 a~i~~~~~~~e 322 (381)
++.+-..++||
T Consensus 110 glpi~~~l~g~ 120 (385)
T PF03547_consen 110 GLPILQALFGE 120 (385)
T ss_pred HHHHHHHHhcc
Confidence 33333344454
No 146
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=22.26 E-value=86 Score=20.90 Aligned_cols=15 Identities=33% Similarity=0.317 Sum_probs=7.3
Q ss_pred HHHhhhhheecCCCC
Q 016869 334 AVLIGLIIYSTTAKD 348 (381)
Q Consensus 334 lil~G~~l~~~~~~~ 348 (381)
++++|+.+....+++
T Consensus 13 ~~lLg~~I~~~~K~y 27 (50)
T PF12606_consen 13 MGLLGLSICTTLKAY 27 (50)
T ss_pred HHHHHHHHHHHhhcc
Confidence 334555555554443
No 147
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=22.19 E-value=2.8e+02 Score=21.94 Aligned_cols=25 Identities=20% Similarity=0.401 Sum_probs=20.7
Q ss_pred cccccHHHHHHHHHHHhhhHHhhcc
Q 016869 132 GTRYSVWQLFGASLCVLGLGLMLLS 156 (381)
Q Consensus 132 ~er~~~~~~~gi~l~~~Gv~l~~~~ 156 (381)
+.|+++.+-.++.+.++|.+++..+
T Consensus 5 ~~KiN~~R~~al~lif~g~~vmy~g 29 (114)
T PF11023_consen 5 SSKINKIRTFALSLIFIGMIVMYIG 29 (114)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4577888889999999999988764
No 148
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=21.84 E-value=5.4e+02 Score=22.45 Aligned_cols=34 Identities=9% Similarity=0.141 Sum_probs=23.1
Q ss_pred HHHHHHhhcccccHHHHHHHHHHH--hhhhheecCC
Q 016869 313 VILRIFCYHQQVNWTYYLAFAAVL--IGLIIYSTTA 346 (381)
Q Consensus 313 ~i~~~~~~~e~~t~~~~iG~~lil--~G~~l~~~~~ 346 (381)
-.+|..++++-.-+.+.+|..+.+ +|.+...+++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~~ 168 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARRE 168 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 344777788888888888877765 4555555443
No 149
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=21.36 E-value=3.6e+02 Score=22.91 Aligned_cols=65 Identities=20% Similarity=0.276 Sum_probs=44.4
Q ss_pred HHHHHHhcccccHHHHHHHHH-------HHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 016869 125 VFTWVFLGTRYSVWQLFGASL-------CVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI 196 (381)
Q Consensus 125 lls~~~l~er~~~~~~~gi~l-------~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~ 196 (381)
......-|..|+..+.+|+.+ ++.|++++-..+. .+..--...++.+++.+++..++-...+++.
T Consensus 87 f~Em~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~~-------~~f~qsv~~gf~a~lGfslvmvlfA~iRER~ 158 (193)
T COG4657 87 FTEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNINEG-------HNFLQSVVYGFGAALGFSLVMVLFAAIRERL 158 (193)
T ss_pred HHHHHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhhh-------hhHHHHHHHHhhhHhhHHHHHHHHHHHHHHH
Confidence 344556667777777777764 5678887765532 2334456788999999999998877666554
No 150
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=20.95 E-value=1.3e+02 Score=17.56 Aligned_cols=20 Identities=10% Similarity=0.145 Sum_probs=10.8
Q ss_pred ccHHHHHHHHHHHhhhhhee
Q 016869 324 VNWTYYLAFAAVLIGLIIYS 343 (381)
Q Consensus 324 ~t~~~~iG~~lil~G~~l~~ 343 (381)
-.+..++|.+++..+.+++.
T Consensus 10 ~~~~~~~G~~l~~~~~~~~~ 29 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGLLLR 29 (34)
T ss_pred cHHHHHHHHHHHHHHHHHhe
Confidence 34566677755555444433
No 151
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.54 E-value=4.1e+02 Score=20.51 Aligned_cols=31 Identities=13% Similarity=0.163 Sum_probs=26.4
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869 124 IVFTWVFLGTRYSVWQLFGASLCVLGLGLML 154 (381)
Q Consensus 124 ~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~ 154 (381)
..++.+.+||.+++.++.+-.+...|+..+.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 5788899999999999999888887777654
Done!