BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016870
(381 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224085890|ref|XP_002307728.1| predicted protein [Populus trichocarpa]
gi|222857177|gb|EEE94724.1| predicted protein [Populus trichocarpa]
Length = 379
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/379 (74%), Positives = 325/379 (85%), Gaps = 1/379 (0%)
Query: 1 MTYDGFPPFISAQLHYLINHFAHPVRVEQAWSGSKY-SNTLDRFTLLIPYCLDTIKWDVI 59
M+YDGFPPFISAQL YL+NH+ H +++EQA SG++Y +LDRFTLLIPYCLD +KWDVI
Sbjct: 1 MSYDGFPPFISAQLQYLLNHYPHTIQIEQARSGTRYFPGSLDRFTLLIPYCLDYMKWDVI 60
Query: 60 YNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELR 119
YNAEFP A PD+IFG EDEDFHPF+ G +GDSR +KNSL WNNKDPTRLLAL+ ELR
Sbjct: 61 YNAEFPLAAPDVIFGAEDEDFHPFHVLCGEDGDSRLVKNSLTDWNNKDPTRLLALVIELR 120
Query: 120 DQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKM 179
D+Y SYQ KRVGEVDDDRLKFEI T++SREGIEMHMSSGVEKPEEVKFAVPLM+MNINKM
Sbjct: 121 DKYRSYQEKRVGEVDDDRLKFEISTIVSREGIEMHMSSGVEKPEEVKFAVPLMNMNINKM 180
Query: 180 VVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMC 239
V CPWRHPQKI LQVIYPV RKY +PSAP LKLM TP LK+LFS+DDVKLP WLDGMC
Sbjct: 181 VPACPWRHPQKIYLQVIYPVGRKYAPSPSAPRLKLMCTPELKALFSIDDVKLPSWLDGMC 240
Query: 240 MAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAF 299
MAEYLPHLEE L+RQV EAV+LI+VRR+FIEALAPL GRP+E D VF RK+ F V SG F
Sbjct: 241 MAEYLPHLEELLQRQVLEAVTLIDVRRQFIEALAPLLGRPLEADPVFCRKASFLVCSGPF 300
Query: 300 SFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEF 359
+ ++ FLST FPKQQPSLM QS+ +FNS GMP+KSPL+T+YPWSPRWE SQMA+R +F
Sbjct: 301 TIMLHVFLSTNFPKQQPSLMFQSTQHFNSLGMPVKSPLITEYPWSPRWETSQMADRISDF 360
Query: 360 LVDESVNFKKYCNEAQLQQ 378
LVDES+NFK++CNE+ LQ
Sbjct: 361 LVDESLNFKRHCNESHLQH 379
>gi|224061995|ref|XP_002300702.1| predicted protein [Populus trichocarpa]
gi|222842428|gb|EEE79975.1| predicted protein [Populus trichocarpa]
Length = 379
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/379 (73%), Positives = 322/379 (84%), Gaps = 1/379 (0%)
Query: 1 MTYDGFPPFISAQLHYLINHFAHPVRVEQAWSGSKY-SNTLDRFTLLIPYCLDTIKWDVI 59
M +DGF P IS+QL YL+NHF H +++EQAWSG++Y +LDRFTLLIPYCLD IKWD+I
Sbjct: 1 MPFDGFSPLISSQLQYLLNHFPHTIQIEQAWSGTRYFPGSLDRFTLLIPYCLDYIKWDII 60
Query: 60 YNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELR 119
YNAEFP A PD+IFGPED+ FHPF EGDSR +KNSL WNNKDP+RLLAL+ ELR
Sbjct: 61 YNAEFPLAAPDVIFGPEDDGFHPFIVVGREEGDSRLVKNSLTDWNNKDPSRLLALVMELR 120
Query: 120 DQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKM 179
D+Y SYQ +RVGEVDDDRLKFEI T++SREGIEMHMSSGVEKP EVKFAVPLMDMNINKM
Sbjct: 121 DKYRSYQERRVGEVDDDRLKFEISTIVSREGIEMHMSSGVEKPGEVKFAVPLMDMNINKM 180
Query: 180 VVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMC 239
V+GCPW HPQKI LQVIYPV RKY A SAP LKLM TP LK+LFS+D+VKLP WLDGMC
Sbjct: 181 VLGCPWSHPQKIYLQVIYPVGRKYAPATSAPRLKLMCTPELKALFSIDEVKLPAWLDGMC 240
Query: 240 MAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAF 299
MAEYLPHLEE L+RQV EAV+LI+VRR+FIEAL+P+ GRP+E D VF RK+ F V SG F
Sbjct: 241 MAEYLPHLEELLQRQVLEAVTLIDVRRQFIEALSPVIGRPLEADPVFCRKASFLVCSGPF 300
Query: 300 SFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEF 359
+FLV FFLSTQFPKQ+PSLM QS +FNS G+P+KSPL+T+Y WSPRWE SQMAER +F
Sbjct: 301 TFLVHFFLSTQFPKQRPSLMFQSIQHFNSLGIPVKSPLITEYLWSPRWEPSQMAERISDF 360
Query: 360 LVDESVNFKKYCNEAQLQQ 378
LVDES+NFK++CNE+QLQ
Sbjct: 361 LVDESLNFKRHCNESQLQH 379
>gi|255538952|ref|XP_002510541.1| Protein BRE, putative [Ricinus communis]
gi|223551242|gb|EEF52728.1| Protein BRE, putative [Ricinus communis]
Length = 362
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 279/358 (77%), Positives = 307/358 (85%), Gaps = 1/358 (0%)
Query: 1 MTYDGFPPFISAQLHYLINHFAHPVRVEQAWSGSKY-SNTLDRFTLLIPYCLDTIKWDVI 59
M++DGFPPFISAQL YL+NH+ H ++VEQ WSGSKY +LDRFTLLIPYCLD +KWD+I
Sbjct: 1 MSFDGFPPFISAQLQYLLNHYTHAIKVEQVWSGSKYYPGSLDRFTLLIPYCLDYLKWDII 60
Query: 60 YNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELR 119
YN EFP A PD+IFGPEDE+FHPF+ G DSR + NSL WNNKDPTRLLALI ELR
Sbjct: 61 YNVEFPLAAPDVIFGPEDENFHPFHLVVGEVADSRLVNNSLTDWNNKDPTRLLALIEELR 120
Query: 120 DQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKM 179
D YMSYQ+KRVGEVDDDRLKFEI T+LSREGIEMHMSSG EKPEEVKFAVPLMDMNINKM
Sbjct: 121 DNYMSYQKKRVGEVDDDRLKFEISTILSREGIEMHMSSGFEKPEEVKFAVPLMDMNINKM 180
Query: 180 VVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMC 239
V CPWRHPQKI LQVIYPV RKYVSAPSAP LKLMST LK+LFS+DDVKLPPWLDGMC
Sbjct: 181 VFACPWRHPQKIYLQVIYPVGRKYVSAPSAPRLKLMSTTELKALFSIDDVKLPPWLDGMC 240
Query: 240 MAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAF 299
MAEYLP+LEE L+RQVSEAVSLI+VRR FIEALAPLFGRP+E D VF RK+ F ASG F
Sbjct: 241 MAEYLPNLEELLQRQVSEAVSLIDVRRCFIEALAPLFGRPLEADPVFCRKATFLAASGPF 300
Query: 300 SFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTF 357
+FLV +LSTQFPKQQPSLMLQS+ +FN+ G P+KS LL DYPWSPRWE SQMAER
Sbjct: 301 TFLVHLYLSTQFPKQQPSLMLQSTQHFNTHGTPVKSSLLADYPWSPRWEISQMAERIL 358
>gi|225457961|ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Vitis vinifera]
gi|302142670|emb|CBI19873.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/376 (72%), Positives = 317/376 (84%), Gaps = 1/376 (0%)
Query: 1 MTYDGFPPFISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIY 60
MT D FPP I+AQ++YL++H ++++Q W+G KYS LDRF+LLIP+CLD IKWDVIY
Sbjct: 1 MTTDAFPPVIAAQINYLLSHSPLSIKIDQMWAGCKYSGLLDRFSLLIPFCLDFIKWDVIY 60
Query: 61 NAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRD 120
NA+ P A PD+IFGPEDE+FHPF +G EGD + KNSL+ WN+KDP+ LL LI ELRD
Sbjct: 61 NAQCPLAAPDVIFGPEDENFHPFC-VTGDEGDFKLSKNSLSDWNSKDPSGLLTLIHELRD 119
Query: 121 QYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMV 180
Y+SYQ+KR+GEVDDDRLKFEI T++SREGIEM+MSSGVEKPEEVKF+VPL+DM+INKMV
Sbjct: 120 LYLSYQKKRIGEVDDDRLKFEISTIVSREGIEMYMSSGVEKPEEVKFSVPLLDMDINKMV 179
Query: 181 VGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCM 240
GC WRH QKI LQVI+PV RKYVSAPSAP LKL+S+P LK LF ++DVKLPPWLDGMCM
Sbjct: 180 FGCNWRHQQKIYLQVIFPVGRKYVSAPSAPRLKLVSSPELKVLFPIEDVKLPPWLDGMCM 239
Query: 241 AEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFS 300
AEYLP+LEE LERQ+ +AVSLI+VRR FIEALAP+FGRP+E D VF RK F ASG F+
Sbjct: 240 AEYLPNLEETLERQILDAVSLIDVRRHFIEALAPVFGRPLEADPVFCRKVTFLAASGVFT 299
Query: 301 FLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFL 360
LV FFL TQFPKQQP LMLQSS +FNSQG PIKS LLT+YPWSPRWE SQMAER EFL
Sbjct: 300 CLVHFFLPTQFPKQQPVLMLQSSQHFNSQGAPIKSHLLTEYPWSPRWESSQMAERILEFL 359
Query: 361 VDESVNFKKYCNEAQL 376
VDE +NFKK+CNEAQL
Sbjct: 360 VDECLNFKKFCNEAQL 375
>gi|449437198|ref|XP_004136379.1| PREDICTED: BRCA1-A complex subunit BRE-like [Cucumis sativus]
gi|449505768|ref|XP_004162564.1| PREDICTED: BRCA1-A complex subunit BRE-like [Cucumis sativus]
Length = 380
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/379 (68%), Positives = 315/379 (83%), Gaps = 2/379 (0%)
Query: 1 MTYDGFPPFISAQLHYLINHFAHPVRVEQAWSGSK-YSNTLDRFTLLIPYCLDTIKWDVI 59
M+ D PP I+A ++YL+NHF PV++E WSGS+ Y +DRFTL++PYCL+ +KWD++
Sbjct: 1 MSSDTVPPIIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIMDRFTLVMPYCLEFVKWDIM 60
Query: 60 YNAEFPHAPPDIIFGPEDEDFHPFYNE-SGGEGDSRSIKNSLATWNNKDPTRLLALIWEL 118
YNAE P + PDI+FGPEDE+FHPF ++ GEGD S+ NSL WN+KDP+RL +L+ EL
Sbjct: 61 YNAESPFSAPDIVFGPEDENFHPFSSKVDEGEGDHNSLHNSLRDWNSKDPSRLTSLLQEL 120
Query: 119 RDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINK 178
RD+Y+SYQRKRV VDD+RLKFE+CTMLSREGIEMH+SSGVEKPEEVKFAVPL+D+NINK
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180
Query: 179 MVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGM 238
M+ GCPWRHPQKI LQV+YPV RKY + PSAP LKL+ST LK+L S++D+KLP W+DGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPTWIDGM 240
Query: 239 CMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGA 298
CMAEYLPHLEE+LE+QV EAVSLI+VRR FIEAL FGRP+E D VF R + ASG
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALNSFFGRPLEADPVFCRTATVITASGV 300
Query: 299 FSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFE 358
F+FLV +STQFPK+QPSL+LQSS +FNSQG PIKS L+TDYPWSPRWE QMAER FE
Sbjct: 301 FTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360
Query: 359 FLVDESVNFKKYCNEAQLQ 377
FL DE+++FK+YCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379
>gi|388513893|gb|AFK45008.1| unknown [Lotus japonicus]
Length = 378
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/374 (69%), Positives = 300/374 (80%), Gaps = 2/374 (0%)
Query: 4 DGFPPFISAQLHYLINHFAHPVRVEQAWSGSKY-SNTLDRFTLLIPYCLDTIKWDVIYNA 62
+ PPFI+AQL +L++HF ++VE AWSG KY S DRFTLLIPYCLD IKWDVIYN
Sbjct: 6 ENVPPFIAAQLTHLLSHFPLNLKVEHAWSGDKYNSGAFDRFTLLIPYCLDFIKWDVIYNV 65
Query: 63 EFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQY 122
+ P A PD+IFG EDEDFHPF+ GEG S N L+ WN KDPTRLL LI LRDQY
Sbjct: 66 DCPIAAPDVIFGAEDEDFHPFHMLPSGEGASLP-SNCLSDWNYKDPTRLLVLIQFLRDQY 124
Query: 123 MSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVG 182
+ YQRKRV VDD+RLKFE+ T++SREGIEMH SSG EK EEVKFAVPL+DMNINKMV G
Sbjct: 125 VLYQRKRVEGVDDERLKFEVSTIVSREGIEMHRSSGFEKSEEVKFAVPLLDMNINKMVPG 184
Query: 183 CPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAE 242
CPWR+PQ++ LQV+YPV RKY+SAPSAP LKL+ST LK+LFS+DDVKLPPWLDGMC+AE
Sbjct: 185 CPWRYPQRMHLQVVYPVGRKYLSAPSAPRLKLVSTSELKALFSIDDVKLPPWLDGMCLAE 244
Query: 243 YLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFL 302
YLP+LEE LE+QV EAVSLI+VRRRFIEALA GRP+E D VF RK+ F SGAF+FL
Sbjct: 245 YLPNLEEYLEKQVLEAVSLIDVRRRFIEALAGPLGRPLEADPVFCRKATFLCTSGAFTFL 304
Query: 303 VLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362
F + TQFPKQQP++MLQSS YFNSQ PIKS L++DYPWSPRWE S MAER EFL D
Sbjct: 305 AHFLIPTQFPKQQPTIMLQSSQYFNSQTTPIKSRLISDYPWSPRWEPSLMAERIGEFLAD 364
Query: 363 ESVNFKKYCNEAQL 376
ES+NFK C+E QL
Sbjct: 365 ESLNFKGQCSEGQL 378
>gi|297795261|ref|XP_002865515.1| hypothetical protein ARALYDRAFT_917509 [Arabidopsis lyrata subsp.
lyrata]
gi|297311350|gb|EFH41774.1| hypothetical protein ARALYDRAFT_917509 [Arabidopsis lyrata subsp.
lyrata]
Length = 380
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/379 (64%), Positives = 300/379 (79%), Gaps = 2/379 (0%)
Query: 1 MTYDGFPPFISAQLHYLINHFAHPVRVEQAWSGSKYS-NTLDRFTLLIPYCLDTIKWDVI 59
M ++G PP I+ QLHYL+NH +++E WSG+K + LDRFTL+IPYCL+TIKWDVI
Sbjct: 1 MAFEGLPPLIADQLHYLLNHSPDSIKIENVWSGNKINPKILDRFTLVIPYCLETIKWDVI 60
Query: 60 YNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELR 119
YN+E+P PPD +FGP+DEDF P + + S+K +L+ W+N+D TRLL +I LR
Sbjct: 61 YNSEYPVDPPDFVFGPDDEDFMPCSAIAPDDDQISSLKKALSQWDNEDSTRLLVIIQGLR 120
Query: 120 DQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPL-MDMNINK 178
DQY++YQR+RVG+VDDDR+KFEI T+L+R+GIEM M+SGV+KPEEVKFAVPL MDMNINK
Sbjct: 121 DQYVAYQRRRVGQVDDDRVKFEISTVLTRKGIEMQMASGVDKPEEVKFAVPLVMDMNINK 180
Query: 179 MVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGM 238
MV GCPW+H QKI LQV+YP+ RKY SAPS P LKL+S+ LK+LFSV+DVKLPPW+DGM
Sbjct: 181 MVAGCPWKHQQKIYLQVVYPILRKYESAPSTPRLKLVSSSDLKALFSVEDVKLPPWMDGM 240
Query: 239 CMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGA 298
C+AEYLPHLEE LERQ+ EAVS I++RR FIE L GRP+E D F RK+ F ASG
Sbjct: 241 CLAEYLPHLEETLERQMEEAVSAIDLRRSFIETLTLFLGRPLEADPTFCRKATFLTASGQ 300
Query: 299 FSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFE 358
F+F+V FF STQFPKQQP+LMLQS + N +P+KS L T+YPWSPRWE +MAER +
Sbjct: 301 FTFMVHFFFSTQFPKQQPTLMLQSCQHLNQSSVPVKSNLFTEYPWSPRWEVGRMAERLCD 360
Query: 359 FLVDESVNFKKYCNEAQLQ 377
FL DE+VNFKKYCNEA LQ
Sbjct: 361 FLTDETVNFKKYCNEALLQ 379
>gi|363807840|ref|NP_001242696.1| uncharacterized protein LOC100814793 [Glycine max]
gi|255644684|gb|ACU22844.1| unknown [Glycine max]
Length = 378
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/375 (67%), Positives = 299/375 (79%), Gaps = 4/375 (1%)
Query: 4 DGFPPFISAQLHYLINHFAHPVRVEQAWSGSKYSNT-LDRFTLLIPYCLDTIKWDVIYNA 62
+ PPFI+AQL +L++HF V+VEQ WS KY++T LDRFTLLIPYCLD IKWDVIY+A
Sbjct: 7 ENVPPFIAAQLSHLLSHFGLTVKVEQMWSSDKYNSTPLDRFTLLIPYCLDFIKWDVIYDA 66
Query: 63 EFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQY 122
E P+ PD+IF PED+DFHPF+ S N L+ WN KDPTRLL LI LRDQY
Sbjct: 67 ESPNTAPDVIFSPEDDDFHPFHMFPSS---SEPANNCLSDWNYKDPTRLLTLIQYLRDQY 123
Query: 123 MSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVG 182
+ YQRKRVGEVDDDRL FEI T+LSREGIEMHMSSG EK EEVKFAVPL+DMNINKMV
Sbjct: 124 VLYQRKRVGEVDDDRLTFEISTILSREGIEMHMSSGAEKSEEVKFAVPLLDMNINKMVAC 183
Query: 183 CPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAE 242
CPWR+ Q+I LQV+YPV RKY+S PSAP LKL+S+P LK++FS+DDVKLPPWLDGMC+AE
Sbjct: 184 CPWRYSQRIYLQVVYPVGRKYMSVPSAPRLKLVSSPELKAVFSIDDVKLPPWLDGMCLAE 243
Query: 243 YLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFL 302
YLP+LEE L +QV EAVSLIEVRR FIEAL+ GRP+E D+VF RK+ F ASG FSFL
Sbjct: 244 YLPNLEEYLGKQVLEAVSLIEVRRHFIEALSSPLGRPVEADAVFCRKATFLAASGVFSFL 303
Query: 303 VLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362
V + TQFPKQQP++MLQSS + NSQ P+KS +++DYPWSPRWE S MAER +FL D
Sbjct: 304 VHLLIPTQFPKQQPAIMLQSSQHLNSQMAPMKSRVMSDYPWSPRWEPSMMAERICDFLAD 363
Query: 363 ESVNFKKYCNEAQLQ 377
E++NF + C+E Q+Q
Sbjct: 364 EALNFMRQCSEGQVQ 378
>gi|42568272|ref|NP_199062.2| BRCA1-A complex subunit BRE [Arabidopsis thaliana]
gi|52627091|gb|AAU84672.1| At5g42470 [Arabidopsis thaliana]
gi|55167890|gb|AAV43777.1| At5g42470 [Arabidopsis thaliana]
gi|332007431|gb|AED94814.1| BRCA1-A complex subunit BRE [Arabidopsis thaliana]
Length = 382
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/382 (63%), Positives = 302/382 (79%), Gaps = 4/382 (1%)
Query: 1 MTYDGFPPFISAQLHYLINHFAHPVRVEQAWSGSKYS-NTLDRFTLLIPYCLDTIKWDVI 59
M ++ FPP I+ QLHYL+NH +++ WSG+K + LDRFTL+IPYCL+TIKWDVI
Sbjct: 1 MAFEEFPPLIADQLHYLLNHSPDSIKIANVWSGNKINPKILDRFTLVIPYCLETIKWDVI 60
Query: 60 YNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSR--SIKNSLATWNNKDPTRLLALIWE 117
YN+E+ PPD +FGP+DEDF P + D + S++ +L+ W+++D TRLL +I
Sbjct: 61 YNSEYAMDPPDFVFGPDDEDFVPCKCSAIAPDDDQISSLEKALSEWDHEDSTRLLVIIQG 120
Query: 118 LRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPL-MDMNI 176
LRDQY++YQR+RVG+VDDDR+KFEI T+L+R+GIEM M+SGV+KPEEVKFAVPL MDMNI
Sbjct: 121 LRDQYVAYQRRRVGQVDDDRVKFEISTVLTRKGIEMQMASGVDKPEEVKFAVPLVMDMNI 180
Query: 177 NKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLD 236
NKMVVGCPW+H QKI LQV+YP+ RKY +APSAP LKL+S LKSLFSV+DVKL PW+D
Sbjct: 181 NKMVVGCPWKHQQKIYLQVVYPILRKYEAAPSAPRLKLVSYYDLKSLFSVEDVKLSPWMD 240
Query: 237 GMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVAS 296
GMC+AEYLPHLEE LERQ+ EAV+ I++RR FIEAL+ GRP+E D F RK+ F AS
Sbjct: 241 GMCLAEYLPHLEETLERQIHEAVAAIDLRRSFIEALSLNLGRPLEADPTFCRKATFLNAS 300
Query: 297 GAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
G F+F+V FF STQFPKQQP+LMLQS + N +P+KS LLT+YPWSPRWE +MAER
Sbjct: 301 GQFTFMVHFFFSTQFPKQQPTLMLQSCQHLNQSSVPVKSNLLTEYPWSPRWEVGRMAERL 360
Query: 357 FEFLVDESVNFKKYCNEAQLQQ 378
+FL DE+VNFKKYCNEA LQ
Sbjct: 361 CDFLTDEAVNFKKYCNEALLQH 382
>gi|357448393|ref|XP_003594472.1| hypothetical protein MTR_2g029040 [Medicago truncatula]
gi|355483520|gb|AES64723.1| hypothetical protein MTR_2g029040 [Medicago truncatula]
Length = 383
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/377 (64%), Positives = 297/377 (78%), Gaps = 3/377 (0%)
Query: 4 DGFPPFISAQLHYLINHFAHPVRVEQAWSGSKY-SNTLDRFTLLIPYCLDTIKWDVIYNA 62
+ PPFI AQL +L++H ++++Q WS KY S +DRFTLLIPYCLD IKWD+I++A
Sbjct: 6 ENVPPFIGAQLSHLLSHSRLTLKIDQLWSSDKYNSGLIDRFTLLIPYCLDFIKWDIIFDA 65
Query: 63 EFPHAPPDIIFGPEDEDFHPFYNE--SGGEGDSRSIKNSLATWNNKDPTRLLALIWELRD 120
E P+ PD+IFGPEDE FHPF+ S ++ + + L+ WN KDP LL I LRD
Sbjct: 66 ESPNVAPDVIFGPEDEHFHPFHMSPPSVEPNNNNNNSSLLSDWNYKDPKCLLNFIQFLRD 125
Query: 121 QYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMV 180
QY+ YQ KRVGEVDDDRLKFEI T++SREG+EMHM S V+K EEVKFAVPL+DMNINKMV
Sbjct: 126 QYVLYQAKRVGEVDDDRLKFEISTIVSREGLEMHMCSFVDKSEEVKFAVPLLDMNINKMV 185
Query: 181 VGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCM 240
GCPWR QKI LQV+YPV RKY+SAPSAP LKL+S+ LK+L+S+DDVKLPPWL+GMC+
Sbjct: 186 SGCPWRQSQKIYLQVVYPVGRKYMSAPSAPRLKLVSSSELKALYSIDDVKLPPWLNGMCL 245
Query: 241 AEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFS 300
AEYLP+LEE LE+QV EAVSLI+VRR+FIEALA GRP+E D VF RK+ F ASG +
Sbjct: 246 AEYLPNLEEYLEKQVLEAVSLIDVRRQFIEALADELGRPVEADPVFCRKATFLSASGVLT 305
Query: 301 FLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFL 360
FLV F + TQFPKQQP +MLQSS +FN+Q P+KS ++DYPWSPRWE S MAER FEFL
Sbjct: 306 FLVHFVIPTQFPKQQPVIMLQSSQHFNAQMAPLKSRPMSDYPWSPRWEPSLMAERIFEFL 365
Query: 361 VDESVNFKKYCNEAQLQ 377
VDE++NFK+ C+E QLQ
Sbjct: 366 VDEALNFKRQCSEGQLQ 382
>gi|388500082|gb|AFK38107.1| unknown [Medicago truncatula]
Length = 383
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/377 (64%), Positives = 294/377 (77%), Gaps = 3/377 (0%)
Query: 4 DGFPPFISAQLHYLINHFAHPVRVEQAWSGSKY-SNTLDRFTLLIPYCLDTIKWDVIYNA 62
+ PPFI AQL +L++H ++++Q WS KY S +DRFTLLIPYCLD IKWD+I++A
Sbjct: 6 ENVPPFIGAQLSHLLSHSRLTLKIDQLWSSDKYNSGLIDRFTLLIPYCLDFIKWDIIFDA 65
Query: 63 EFPHAPPDIIFGPEDEDFHPFYNE--SGGEGDSRSIKNSLATWNNKDPTRLLALIWELRD 120
E P+ PD+IFGPEDE FHPF+ S ++ + + L+ WN KDP LL I LR
Sbjct: 66 ESPNVAPDVIFGPEDEHFHPFHMSPPSVEPNNNNNNSSLLSDWNYKDPKCLLNFIQFLRG 125
Query: 121 QYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMV 180
QY+ YQ KRVGEVDD RLKFEI T++SREG+EMHM S V+K EEVKFAVPL+DMNINKMV
Sbjct: 126 QYVLYQAKRVGEVDDGRLKFEISTIVSREGLEMHMCSFVDKSEEVKFAVPLLDMNINKMV 185
Query: 181 VGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCM 240
GCPWR QKI LQV+YPV RKY+SAPSAP LKL+S+ LK+L+S+DDVKLPPWL+GMC+
Sbjct: 186 SGCPWRQSQKIYLQVVYPVGRKYMSAPSAPRLKLVSSSELKALYSIDDVKLPPWLNGMCL 245
Query: 241 AEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFS 300
AEYLP+LEE LE+QV EAVSLI+VRR+FIEALA GRP+E D VF RK+ F ASG +
Sbjct: 246 AEYLPNLEEYLEKQVLEAVSLIDVRRQFIEALADELGRPVEADPVFCRKATFLSASGVLT 305
Query: 301 FLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFL 360
FLV F + TQFPKQQP +MLQSS +FN+Q P+KS ++DYPWSPRWE S MAER FEFL
Sbjct: 306 FLVHFVIPTQFPKQQPVIMLQSSQHFNAQMAPLKSRPMSDYPWSPRWEPSLMAERIFEFL 365
Query: 361 VDESVNFKKYCNEAQLQ 377
VDE++NFK C+E QLQ
Sbjct: 366 VDEALNFKGQCSEGQLQ 382
>gi|9759483|dbj|BAB10488.1| brain and reproductive organ-expressed protein-like [Arabidopsis
thaliana]
Length = 351
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/382 (57%), Positives = 276/382 (72%), Gaps = 35/382 (9%)
Query: 1 MTYDGFPPFISAQLHYLINHFAHPVRVEQAWSGSKYS-NTLDRFTLLIPYCLDTIKWDVI 59
M ++ FPP I+ QLHYL+NH +++ WSG+K + LDRFTL+IPYCL+TIKWDVI
Sbjct: 1 MAFEEFPPLIADQLHYLLNHSPDSIKIANVWSGNKINPKILDRFTLVIPYCLETIKWDVI 60
Query: 60 YNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSR--SIKNSLATWNNKDPTRLLALIWE 117
YN+E+ PPD +FGP+DEDF P + D + S++ +L+ W+++D TRLL +I
Sbjct: 61 YNSEYAMDPPDFVFGPDDEDFVPCKCSAIAPDDDQISSLEKALSEWDHEDSTRLLVIIQG 120
Query: 118 LRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPL-MDMNI 176
LRDQY++YQR+RVG+VDDDR+KFEI T+L+R+GIEM M+SGV+KPEEVKFAVPL MDMNI
Sbjct: 121 LRDQYVAYQRRRVGQVDDDRVKFEISTVLTRKGIEMQMASGVDKPEEVKFAVPLVMDMNI 180
Query: 177 NKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLD 236
NKMVVGCPW+H QKI LQV+YP+ RKY +AP
Sbjct: 181 NKMVVGCPWKHQQKIYLQVVYPILRKYEAAP----------------------------- 211
Query: 237 GMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVAS 296
C+AEYLPHLEE LERQ+ EAV+ I++RR FIEAL+ GRP+E D F RK+ F AS
Sbjct: 212 --CLAEYLPHLEETLERQIHEAVAAIDLRRSFIEALSLNLGRPLEADPTFCRKATFLNAS 269
Query: 297 GAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
G F+F+V FF STQFPKQQP+LMLQS + N +P+KS LLT+YPWSPRWE +MAER
Sbjct: 270 GQFTFMVHFFFSTQFPKQQPTLMLQSCQHLNQSSVPVKSNLLTEYPWSPRWEVGRMAERL 329
Query: 357 FEFLVDESVNFKKYCNEAQLQQ 378
+FL DE+VNFKKYCNEA LQ
Sbjct: 330 CDFLTDEAVNFKKYCNEALLQH 351
>gi|115469974|ref|NP_001058586.1| Os06g0715600 [Oryza sativa Japonica Group]
gi|53791784|dbj|BAD53578.1| putative brain and reproductive organ-expressed protein [Oryza
sativa Japonica Group]
gi|113596626|dbj|BAF20500.1| Os06g0715600 [Oryza sativa Japonica Group]
gi|215734968|dbj|BAG95690.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765259|dbj|BAG86956.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636227|gb|EEE66359.1| hypothetical protein OsJ_22662 [Oryza sativa Japonica Group]
Length = 388
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/373 (55%), Positives = 272/373 (72%), Gaps = 5/373 (1%)
Query: 8 PFISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHA 67
P ++AQL+++++ P+RV Q WSG + DRFTL IP+CLD + WD +YNA P
Sbjct: 20 PLVAAQLNFVLSQANLPIRVGQIWSGCRDGRYADRFTLAIPFCLDYVYWDFLYNALSPKV 79
Query: 68 PPDIIFGPEDEDFHPFYN-ESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQ 126
PD++FGP+DE F P + + G G+ K+ LA W+ +D + LL+LI ELR+ Y+ YQ
Sbjct: 80 APDVVFGPDDEGFQPLVDFDETGSGE----KSCLANWDCRDTSALLSLIKELREFYIEYQ 135
Query: 127 RKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVGCPWR 186
+KR EVDD RLKFEI T+LS+EGIE+ S +P+EVKFAVPL+D+++ K+V GCPW+
Sbjct: 136 KKRAAEVDDARLKFEISTVLSKEGIEVCTVSSNGRPDEVKFAVPLLDLDLAKLVPGCPWK 195
Query: 187 HPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPH 246
PQKI LQ ++P++R Y S PSAP LKL+STP LKS FSVDDVKLPPWLDGMCMAEYLP+
Sbjct: 196 LPQKIHLQAVFPISRSYSSVPSAPRLKLVSTPDLKSFFSVDDVKLPPWLDGMCMAEYLPN 255
Query: 247 LEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFLVLFF 306
LEE L+ QV EA + I RRRFIEALAP FGRP+E D +F RK+ SG F+FLV F
Sbjct: 256 LEENLKIQVVEASASIGSRRRFIEALAPTFGRPLEADPIFCRKATILSISGIFTFLVHFV 315
Query: 307 LSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVN 366
+ QFPK QP L L+SS +FN+QG+PI S + DYPWSPRW+ ++M ER ++FLVDE
Sbjct: 316 IPLQFPKHQPVLTLESSQHFNAQGLPIMSAPVNDYPWSPRWDPTEMVERIYDFLVDECQT 375
Query: 367 FKKYCNEAQLQQN 379
FKK+C+++ QQ
Sbjct: 376 FKKFCSDSIPQQK 388
>gi|357123757|ref|XP_003563574.1| PREDICTED: LOW QUALITY PROTEIN: BRCA1-A complex subunit BRE-like
[Brachypodium distachyon]
Length = 388
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/369 (55%), Positives = 265/369 (71%), Gaps = 5/369 (1%)
Query: 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPP 69
+ AQL++L++ PV+V Q WSG + DRFTL IP+CLD + WD +YNA +P P
Sbjct: 22 VDAQLNFLLSDSTLPVKVGQIWSGCRNRRYADRFTLAIPFCLDYVYWDFMYNAMYPKVAP 81
Query: 70 DIIFGPEDEDFHPFYN-ESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRK 128
D++FGP+DE F P + + G GD K+ LA W+ +DP L+ L+ ELR Y+ YQ+K
Sbjct: 82 DVLFGPDDEGFQPLVDYDDTGNGD----KSCLAQWDFRDPRGLMCLVKELRLLYIEYQKK 137
Query: 129 RVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVGCPWRHP 188
RV EVDD RLKFE+ T+L++EGIE+ M S ++P+EVKFAVPL+D++ K+V GCPW+ P
Sbjct: 138 RVAEVDDARLKFELSTVLAKEGIEVCMVSLTDRPDEVKFAVPLLDLDFTKLVPGCPWKFP 197
Query: 189 QKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLE 248
QKI LQ I+PV+R Y S P AP LKL+STP LKS FSVD KLP W+DGMCMAEY+P LE
Sbjct: 198 QKIHLQAIFPVSRSYPSVPPAPRLKLISTPDLKSFFSVDGFKLPTWIDGMCMAEYIPRLE 257
Query: 249 EALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFLVLFFLS 308
E L+ QV EA + I RRRFIEALAP FGRP+E D++F RK+ SG F+FLV F +
Sbjct: 258 ENLQIQVVEASASIGSRRRFIEALAPTFGRPLEADAIFCRKATVLSISGIFTFLVHFAIP 317
Query: 309 TQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFK 368
QFPKQQP L LQSS + NSQG+PI S + DYPWSPRW+ ++M ER ++FLVDE NFK
Sbjct: 318 LQFPKQQPILTLQSSQHCNSQGIPITSHPINDYPWSPRWDPTEMVERIYDFLVDECQNFK 377
Query: 369 KYCNEAQLQ 377
K C++ Q
Sbjct: 378 KLCSDGCSQ 386
>gi|116789230|gb|ABK25167.1| unknown [Picea sitchensis]
Length = 397
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/369 (54%), Positives = 265/369 (71%)
Query: 6 FPPFISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFP 65
F P I++QL YL+ ++VEQ GS+ + DRFTLL+P CLD IKWDV+YN+++P
Sbjct: 24 FSPLIASQLDYLLTRSPLAIKVEQVSYGSRNARYADRFTLLLPCCLDYIKWDVVYNSQYP 83
Query: 66 HAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSY 125
PD+IFG +D+ F P G+ S+SI W KDP+ LL LI ELR+ YM Y
Sbjct: 84 WVAPDVIFGLDDDSFQPLSFTGEGQETSQSIWGIFCDWKYKDPSGLLRLILELRNLYMGY 143
Query: 126 QRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVGCPW 185
QRKRV E+DD RLKFEI T++ REG+E+ + SG+E+ + VKFAVPL+D++++ ++ G P
Sbjct: 144 QRKRVEELDDPRLKFEISTIIPREGLEICLLSGIERSDGVKFAVPLLDLDLSNILAGYPL 203
Query: 186 RHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLP 245
R Q+I LQVI+PV ++ PSAPHLKL+++ LK LF ++DV LP W+DGMCMAEY+P
Sbjct: 204 RQQQQIFLQVIFPVRKRQSEIPSAPHLKLVASTTLKELFDIEDVTLPVWVDGMCMAEYIP 263
Query: 246 HLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFLVLF 305
+LEE L QVSEA++ + RR FIEAL P FGRP+E ++VF R+ ASG FSFLV F
Sbjct: 264 NLEENLRAQVSEAIASVNARRLFIEALVPHFGRPLEAETVFCRRVSILAASGNFSFLVHF 323
Query: 306 FLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESV 365
L QFPKQQP L QSS +F+SQGMPI S L DYPWSPRW+ S+M +R EF+V+ES+
Sbjct: 324 TLPIQFPKQQPILTFQSSQHFDSQGMPITSRLYADYPWSPRWDVSEMTQRILEFIVEESI 383
Query: 366 NFKKYCNEA 374
NFKK+C++A
Sbjct: 384 NFKKFCSDA 392
>gi|326516780|dbj|BAJ96382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 255/364 (70%), Gaps = 7/364 (1%)
Query: 13 QLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDII 72
QL +L+ + + P++V Q WSG DRFTL +P+CLD + WD +YNA P PD+I
Sbjct: 28 QLKFLLTNSSLPIKVVQIWSGCGNGRYADRFTLAVPFCLDYVYWDFLYNAMHPKVAPDVI 87
Query: 73 FGPEDEDFHPF--YNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRV 130
FG DE F P Y+ESG G K+ LA W+ +DP LL L+ ELR Y+ YQ+K V
Sbjct: 88 FGQGDEGFQPLVDYDESGNGG-----KSCLAHWDYRDPRGLLCLVEELRLLYIEYQKKLV 142
Query: 131 GEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVGCPWRHPQK 190
EV D RLKFEI T+L +EGIE+ M S +P+EVKFAVPL+D+++N MV GCPW+ PQK
Sbjct: 143 AEVGDTRLKFEIGTVLDKEGIEVSMVSSTGRPDEVKFAVPLLDLDLNMMVPGCPWKLPQK 202
Query: 191 ISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEA 250
I LQ I+PV+ ++S PSAP LKL+STP LKSLFSVD VKLP W+DGMCMAEY+P LEE
Sbjct: 203 IHLQAIFPVSSSFLSVPSAPGLKLISTPDLKSLFSVDGVKLPAWVDGMCMAEYIPSLEEN 262
Query: 251 LERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFLVLFFLSTQ 310
L+ QV +A + I RRRFIEALAP FGRP+E D +F RK+ SG F+FLV F + Q
Sbjct: 263 LKMQVVDASASIGRRRRFIEALAPAFGRPLEADPIFCRKATVLSISGIFTFLVHFVIPLQ 322
Query: 311 FPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKKY 370
FP+QQP L LQS + NSQG+PI SP YPWSPRWE ++M ER +++L DE NFKK
Sbjct: 323 FPQQQPILTLQSCQHCNSQGIPITSPPKNSYPWSPRWEVTEMVERIYDYLADECQNFKKQ 382
Query: 371 CNEA 374
C++
Sbjct: 383 CSDG 386
>gi|218198885|gb|EEC81312.1| hypothetical protein OsI_24465 [Oryza sativa Indica Group]
Length = 370
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/373 (53%), Positives = 261/373 (69%), Gaps = 23/373 (6%)
Query: 8 PFISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHA 67
P ++AQL+++++ P+RV Q WSG + DRFTL IP+CLD + WD +YNA P
Sbjct: 20 PLVAAQLNFVLSQANLPIRVGQIWSGCRDGRYADRFTLAIPFCLDYVYWDFLYNALSPKV 79
Query: 68 PPDIIFGPEDEDFHPFYN-ESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQ 126
PD++FGP+DE F P + + G G+ K+ LA W+ +D + LL+LI ELR+ Y+ YQ
Sbjct: 80 APDVVFGPDDEGFQPLVDFDETGSGE----KSCLANWDCRDTSALLSLIKELREFYIEYQ 135
Query: 127 RKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVGCPWR 186
+KR EVDD RLKFEI T+LS+EGIE+ S +P+EVKFAVPL+D+++ K+V GCPW+
Sbjct: 136 KKRAAEVDDARLKFEISTVLSKEGIEVCTVSSNGRPDEVKFAVPLLDLDLAKLVPGCPWK 195
Query: 187 HPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPH 246
PQKI LQ ++P++R Y S PSAP LKL+STP LKS FSVDDVKLPPWLDGMCMAEYLP+
Sbjct: 196 LPQKIHLQAVFPISRSYSSVPSAPRLKLVSTPDLKSFFSVDDVKLPPWLDGMCMAEYLPN 255
Query: 247 LEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFLVLFF 306
LEE L+ QV EA + I RRRFIEALAP FGRP+E D V F
Sbjct: 256 LEENLKIQVVEASASIGSRRRFIEALAPTFGRPLEADPVH------------------FV 297
Query: 307 LSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVN 366
+ QFPK QP L L+SS +FN+QG+PI S + DYPWSPRW+ ++M ER ++FLVDE
Sbjct: 298 IPLQFPKHQPVLTLESSQHFNAQGLPIMSAPVNDYPWSPRWDPTEMVERIYDFLVDECQT 357
Query: 367 FKKYCNEAQLQQN 379
FKK+C+++ QQ
Sbjct: 358 FKKFCSDSIPQQK 370
>gi|226505858|ref|NP_001149020.1| protein BRE [Zea mays]
gi|194702686|gb|ACF85427.1| unknown [Zea mays]
gi|195624028|gb|ACG33844.1| protein BRE [Zea mays]
gi|413934952|gb|AFW69503.1| protein BRE [Zea mays]
Length = 393
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/377 (52%), Positives = 263/377 (69%), Gaps = 9/377 (2%)
Query: 8 PFISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHA 67
P I+AQL+YL++H P+RV Q WSG + DRF L IP+CLD + WD +YNA P
Sbjct: 21 PLIAAQLNYLLSHSKLPIRVVQIWSGCRNGRPADRFRLAIPFCLDYVHWDFVYNALSPKV 80
Query: 68 PPDIIFGPEDEDFHPFYN-ESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQ 126
PD++FGPEDE F P + + G GD K+ LA W+ + P L AL+ ELR+ Y+ YQ
Sbjct: 81 APDVVFGPEDERFQPLVDYAAAGNGD----KSCLARWDCRAPEGLHALVQELRELYIEYQ 136
Query: 127 RKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLM--DMNINKMVVGCP 184
++RV VDD RL FE+ T+LS+EGIE+ M ++P+E KFAVPL+ D + K+V GCP
Sbjct: 137 KERVHMVDDARLAFELSTVLSKEGIEVCMVPSADRPDEAKFAVPLLESDFDFAKLVPGCP 196
Query: 185 WRHPQKISLQVIYPVNRKYVSAPS--APHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAE 242
WR PQKI LQVI+P++R + AP LKL+STP L+SL SV+DVKLPPW +GMC+AE
Sbjct: 197 WRLPQKIHLQVIFPISRSSSYSSMPSAPRLKLISTPDLRSLLSVEDVKLPPWSNGMCLAE 256
Query: 243 YLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFL 302
YLP LE++L + +A + I RRRFIEALAP+FGRP+E D +F R++ SG F+FL
Sbjct: 257 YLPALEDSLNGLLVDASASIGSRRRFIEALAPIFGRPLEADPIFCRRATVLSISGMFTFL 316
Query: 303 VLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362
V F + QFPKQQP + LQSS + N+ GMPI SP + DYPWSPRW+ ++M ER ++FL D
Sbjct: 317 VHFAIPLQFPKQQPVVTLQSSQHCNADGMPITSPPINDYPWSPRWDQAEMVERIYDFLTD 376
Query: 363 ESVNFKKYCNEAQLQQN 379
E NFKK+C++A QQ
Sbjct: 377 ECQNFKKFCSDAITQQK 393
>gi|413934949|gb|AFW69500.1| hypothetical protein ZEAMMB73_230497 [Zea mays]
Length = 413
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 263/397 (66%), Gaps = 29/397 (7%)
Query: 8 PFISAQLHYLINHFAHPVRVE--------------------QAWSGSKYSNTLDRFTLLI 47
P I+AQL+YL++H P+RV Q WSG + DRF L I
Sbjct: 21 PLIAAQLNYLLSHSKLPIRVPALPRLAARRSLSHFARLQVVQIWSGCRNGRPADRFRLAI 80
Query: 48 PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYN-ESGGEGDSRSIKNSLATWNNK 106
P+CLD + WD +YNA P PD++FGPEDE F P + + G GD K+ LA W+ +
Sbjct: 81 PFCLDYVHWDFVYNALSPKVAPDVVFGPEDERFQPLVDYAAAGNGD----KSCLARWDCR 136
Query: 107 DPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVK 166
P L AL+ ELR+ Y+ YQ++RV VDD RL FE+ T+LS+EGIE+ M ++P+E K
Sbjct: 137 APEGLHALVQELRELYIEYQKERVHMVDDARLAFELSTVLSKEGIEVCMVPSADRPDEAK 196
Query: 167 FAVPLM--DMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPS--APHLKLMSTPALKS 222
FAVPL+ D + K+V GCPWR PQKI LQVI+P++R + AP LKL+STP L+S
Sbjct: 197 FAVPLLESDFDFAKLVPGCPWRLPQKIHLQVIFPISRSSSYSSMPSAPRLKLISTPDLRS 256
Query: 223 LFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIET 282
L SV+DVKLPPW +GMC+AEYLP LE++L + +A + I RRRFIEALAP+FGRP+E
Sbjct: 257 LLSVEDVKLPPWSNGMCLAEYLPALEDSLNGLLVDASASIGSRRRFIEALAPIFGRPLEA 316
Query: 283 DSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYP 342
D +F R++ SG F+FLV F + QFPKQQP + LQSS + N+ GMPI SP + DYP
Sbjct: 317 DPIFCRRATVLSISGMFTFLVHFAIPLQFPKQQPVVTLQSSQHCNADGMPITSPPINDYP 376
Query: 343 WSPRWEHSQMAERTFEFLVDESVNFKKYCNEAQLQQN 379
WSPRW+ ++M ER ++FL DE NFKK+C++A QQ
Sbjct: 377 WSPRWDQAEMVERIYDFLTDECQNFKKFCSDAITQQK 413
>gi|356555319|ref|XP_003545981.1| PREDICTED: BRCA1-A complex subunit BRE-like [Glycine max]
Length = 266
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/258 (71%), Positives = 216/258 (83%)
Query: 120 DQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKM 179
DQY+ YQRKRVGEVDDDRL FE T+LSREGIEMHMSSG EK EEVKFAVPL+DMNINKM
Sbjct: 9 DQYVLYQRKRVGEVDDDRLTFEASTILSREGIEMHMSSGAEKSEEVKFAVPLLDMNINKM 68
Query: 180 VVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMC 239
V CPWR+ QKI LQV+YPV RKY+SAPSA LKL+S+P LK++FS+DDVKLPPWLDGMC
Sbjct: 69 VACCPWRYSQKIFLQVVYPVGRKYMSAPSAARLKLVSSPELKAVFSIDDVKLPPWLDGMC 128
Query: 240 MAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAF 299
+AEYLP+LEE L +QV EAVSLIEVRR FIEAL+ FGRP+E D+VF RK+ F ASG F
Sbjct: 129 LAEYLPNLEEYLGKQVLEAVSLIEVRRHFIEALSSPFGRPVEADAVFCRKATFLAASGVF 188
Query: 300 SFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEF 359
+FLV + TQFPKQQP++MLQSS +FNSQ P+KS +++DYPWSPRWE S MAER E
Sbjct: 189 TFLVHLLIPTQFPKQQPAIMLQSSQHFNSQMAPMKSRVMSDYPWSPRWETSLMAERICEL 248
Query: 360 LVDESVNFKKYCNEAQLQ 377
L DE++NFK+ C+E Q+Q
Sbjct: 249 LADEALNFKRQCSEGQVQ 266
>gi|217072272|gb|ACJ84496.1| unknown [Medicago truncatula]
Length = 251
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/242 (63%), Positives = 189/242 (78%), Gaps = 3/242 (1%)
Query: 4 DGFPPFISAQLHYLINHFAHPVRVEQAWSGSKY-SNTLDRFTLLIPYCLDTIKWDVIYNA 62
+ PPFI AQL +L++H ++++Q WS KY S +DRFTLLIPYCLD IKWD+I++A
Sbjct: 6 ENVPPFIGAQLSHLLSHSRLTLKIDQLWSSDKYNSGLIDRFTLLIPYCLDFIKWDIIFDA 65
Query: 63 EFPHAPPDIIFGPEDEDFHPFYNE--SGGEGDSRSIKNSLATWNNKDPTRLLALIWELRD 120
E P+ PD+IFGPEDE FHPF+ S ++ + + L+ WN KDP LL I LRD
Sbjct: 66 ESPNVAPDVIFGPEDEHFHPFHMSPPSVEPNNNNNNSSLLSDWNYKDPKCLLNFIQFLRD 125
Query: 121 QYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMV 180
QY+ YQ KRVGEVDDDRLKFEI T++SREG+EMHM S V+K EEVKFAVPL+DMNINKMV
Sbjct: 126 QYVLYQAKRVGEVDDDRLKFEISTIVSREGLEMHMCSFVDKSEEVKFAVPLLDMNINKMV 185
Query: 181 VGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCM 240
GCPWR QKI LQV+YPV RKY+SAPSAP LKL+S+ LK+L+S+DDVKLPPWL+GMC+
Sbjct: 186 SGCPWRQSQKIYLQVVYPVGRKYMSAPSAPRLKLVSSSELKALYSIDDVKLPPWLNGMCL 245
Query: 241 AE 242
A+
Sbjct: 246 AD 247
>gi|168045824|ref|XP_001775376.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673321|gb|EDQ59846.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 390
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 231/375 (61%), Gaps = 19/375 (5%)
Query: 7 PPFISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPH 66
P +++AQL YL H P++VE SG++ + LDRF+L +P CL +KWDV+YN
Sbjct: 22 PSWLNAQLQYLRMHSPVPLKVENLRSGARNGHILDRFSLFVPCCLSYVKWDVVYNGNDTR 81
Query: 67 APPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQ 126
PDIIFG +DE F P ++S S L W DPTRLL LI +R Y+ YQ
Sbjct: 82 VAPDIIFGADDETFQPLMDDS-----ELSPCYYLRDWTVADPTRLLKLILLIRGLYLQYQ 136
Query: 127 RKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLM--------DMNINK 178
RK+V EV D+R++FE+ TM + +G+EM +++ E EEV FA PL+ N
Sbjct: 137 RKKVEEVSDERVRFEMSTMAAIQGLEMCVTTISEGMEEVNFAFPLVLEMENPHSATNSQS 196
Query: 179 MVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGM 238
+ C ISLQV +PV R S AP LKL++ ++ +F VDDVKLP W + M
Sbjct: 197 SSITC-----SDISLQVKFPV-RGGQSGGGAPQLKLVAPEGMRDVFDVDDVKLPVWPEHM 250
Query: 239 CMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGA 298
C+ EY P LE L++QV EA + + +RR F+EAL P FG P+E D+++YRK+ + G
Sbjct: 251 CLVEYKPTLELTLQQQVREARASVRLRRNFVEALFPFFGHPLEVDTLYYRKASILTSFGV 310
Query: 299 FSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFE 358
F+FLV F L QFPK QPS QSS +F+++G P+ S L DYPWSPRWE S+MA+R F+
Sbjct: 311 FTFLVHFVLPIQFPKIQPSFTFQSSQHFDARGKPLVSRLYQDYPWSPRWEASEMAQRIFD 370
Query: 359 FLVDESVNFKKYCNE 373
F+ +E + FK+ C +
Sbjct: 371 FVAEECLAFKRSCGD 385
>gi|302798731|ref|XP_002981125.1| hypothetical protein SELMODRAFT_178578 [Selaginella moellendorffii]
gi|300151179|gb|EFJ17826.1| hypothetical protein SELMODRAFT_178578 [Selaginella moellendorffii]
Length = 368
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 236/372 (63%), Gaps = 12/372 (3%)
Query: 6 FPPFISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFP 65
P I Q+ YL+ + P++V+ + + DRF++LIP L+ ++W+VI++ + P
Sbjct: 2 LPRDIVDQVDYLLQNSLLPIQVDGFRKSHESHSFFDRFSVLIPCFLEPVRWEVIFSCQHP 61
Query: 66 HAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSY 125
+ PPD+IF D DF P S SI + L W++KDP+ LL + ELR++Y+ Y
Sbjct: 62 YWPPDVIFAAHDSDFQPLATNS-------SISSILKGWDSKDPSTLLRFLVELRNEYLQY 114
Query: 126 QRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVGCPW 185
QRKRV E+ D RL FE+ T+ S E +EM + + + V F++PL +++++K+
Sbjct: 115 QRKRVEELKDSRLHFEVNTLESIEDLEMGLVTDGDN-ARVIFSIPLHELDLSKLARQSRL 173
Query: 186 --RHPQK-ISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAE 242
+ P + LQV YPV R++ S+ + P +KL + L+ +F V+DV+LP W D MC+AE
Sbjct: 174 LLQPPNTGVVLQVCYPVQREFTSSSAVPLIKLHAPNVLREVFKVEDVRLPAWTDSMCLAE 233
Query: 243 YLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFL 302
Y+P L E L+ Q+ +A + + +RR FIEAL P+FGRP+E ++ F RK ++G F+FL
Sbjct: 234 YIPKLLELLQSQIIDACASLTLRRNFIEALVPVFGRPLEAETDFGRKVSMIASAGVFTFL 293
Query: 303 VLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362
+ L QFPK QP+L+LQSS +F+SQG PI S DYPWSPRW+ S+M R +F+ +
Sbjct: 294 IHISLPLQFPKVQPTLLLQSSQHFDSQGRPI-SRAYEDYPWSPRWDPSEMVSRICDFITE 352
Query: 363 ESVNFKKYCNEA 374
E+ +FK+YCNE+
Sbjct: 353 ENASFKQYCNES 364
>gi|413934950|gb|AFW69501.1| hypothetical protein ZEAMMB73_230497 [Zea mays]
gi|413934951|gb|AFW69502.1| hypothetical protein ZEAMMB73_230497 [Zea mays]
Length = 301
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/284 (52%), Positives = 197/284 (69%), Gaps = 9/284 (3%)
Query: 8 PFISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHA 67
P I+AQL+YL++H P+RV Q WSG + DRF L IP+CLD + WD +YNA P
Sbjct: 21 PLIAAQLNYLLSHSKLPIRVVQIWSGCRNGRPADRFRLAIPFCLDYVHWDFVYNALSPKV 80
Query: 68 PPDIIFGPEDEDFHPFYN-ESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQ 126
PD++FGPEDE F P + + G GD K+ LA W+ + P L AL+ ELR+ Y+ YQ
Sbjct: 81 APDVVFGPEDERFQPLVDYAAAGNGD----KSCLARWDCRAPEGLHALVQELRELYIEYQ 136
Query: 127 RKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLM--DMNINKMVVGCP 184
++RV VDD RL FE+ T+LS+EGIE+ M ++P+E KFAVPL+ D + K+V GCP
Sbjct: 137 KERVHMVDDARLAFELSTVLSKEGIEVCMVPSADRPDEAKFAVPLLESDFDFAKLVPGCP 196
Query: 185 WRHPQKISLQVIYPVNRKYVSAPS--APHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAE 242
WR PQKI LQVI+P++R + AP LKL+STP L+SL SV+DVKLPPW +GMC+AE
Sbjct: 197 WRLPQKIHLQVIFPISRSSSYSSMPSAPRLKLISTPDLRSLLSVEDVKLPPWSNGMCLAE 256
Query: 243 YLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVF 286
YLP LE++L + +A + I RRRFIEALAP+FGRP+E D V
Sbjct: 257 YLPALEDSLNGLLVDASASIGSRRRFIEALAPIFGRPLEADPVL 300
>gi|302801702|ref|XP_002982607.1| hypothetical protein SELMODRAFT_445185 [Selaginella moellendorffii]
gi|300149706|gb|EFJ16360.1| hypothetical protein SELMODRAFT_445185 [Selaginella moellendorffii]
Length = 375
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 234/372 (62%), Gaps = 12/372 (3%)
Query: 6 FPPFISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFP 65
P I Q+ YL+ + P++V+ + + DRF++LIP L+ ++W+VI++ + P
Sbjct: 9 LPRDIVDQVDYLLQNSVLPIQVDGFRKSHESHSFFDRFSVLIPCFLEPVRWEVIFSCQHP 68
Query: 66 HAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSY 125
+ PPD+IF D DF P S SI + L W++KDP+ LL + ELR++Y+ Y
Sbjct: 69 YWPPDVIFAAHDSDFQPLATNS-------SISSILKGWDSKDPSTLLRFLVELRNEYLQY 121
Query: 126 QRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVGCPW 185
QRKRV E+ D RL FE+ T+ S E +EM + + + V F++PL +++++K+
Sbjct: 122 QRKRVEELKDSRLHFEVNTLESIEDLEMGLVTDGDN-ARVIFSIPLHEVDLSKLARQSRL 180
Query: 186 --RHPQK-ISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAE 242
+ P + LQV YPV R++ + P +KL + L+ +F V+DV+LP W D MC+AE
Sbjct: 181 LLQPPNTGVVLQVCYPVQREFTFLSAVPLIKLHAPNVLREVFKVEDVRLPAWTDSMCLAE 240
Query: 243 YLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFL 302
Y+P L E L+ Q+ +A + + +RR FIEAL P+FGRP+E ++ F RK ++G F+FL
Sbjct: 241 YIPKLLELLQSQIVDACASLTLRRNFIEALVPVFGRPLEAETDFGRKVSMIASAGVFTFL 300
Query: 303 VLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362
+ L QFPK QP+L+LQSS +F+SQG PI S DYPWSPRW+ S+M R +F+ +
Sbjct: 301 IHISLPLQFPKVQPTLLLQSSQHFDSQGRPI-SRAYEDYPWSPRWDPSEMVSRICDFITE 359
Query: 363 ESVNFKKYCNEA 374
E+ +FK+YCNE+
Sbjct: 360 ENASFKQYCNES 371
>gi|194689310|gb|ACF78739.1| unknown [Zea mays]
Length = 252
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 140/251 (55%), Positives = 183/251 (72%), Gaps = 4/251 (1%)
Query: 133 VDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLM--DMNINKMVVGCPWRHPQK 190
VDD RL FE+ T+LS+EGIE+ M ++P+E KFAVPL+ D + K+V GCPWR PQK
Sbjct: 2 VDDARLAFELSTVLSKEGIEVCMVPSADRPDEAKFAVPLLESDFDFAKLVPGCPWRLPQK 61
Query: 191 ISLQVIYPVNRKYVSAPS--APHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLE 248
I LQVI+P++R + AP LKL+STP L+SL SV+DVKLPPW +GMC+AEYLP LE
Sbjct: 62 IHLQVIFPISRSSSYSSMPSAPRLKLISTPDLRSLLSVEDVKLPPWSNGMCLAEYLPALE 121
Query: 249 EALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFLVLFFLS 308
++L + +A + I RRRFIEALAP+FGRP+E D +F R++ SG F+FLV F +
Sbjct: 122 DSLNGLLVDASASIGSRRRFIEALAPIFGRPLEADPIFCRRATVLSISGMFTFLVHFAIP 181
Query: 309 TQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFK 368
QFPKQQP + LQSS + N+ GMPI SP + DYPWSPRW+ ++M ER ++FL DE NFK
Sbjct: 182 LQFPKQQPVVTLQSSQHCNADGMPITSPPINDYPWSPRWDQAEMVERIYDFLTDECQNFK 241
Query: 369 KYCNEAQLQQN 379
K+C++A QQ
Sbjct: 242 KFCSDAITQQK 252
>gi|427785289|gb|JAA58096.1| Putative brain and reproductive organ-expressed protein
[Rhipicephalus pulchellus]
Length = 368
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 181/382 (47%), Gaps = 44/382 (11%)
Query: 6 FPPFISAQLHYLINHFA------HPVRVEQAWSGSKYSNT---LDRFTLLIPYCLDTIKW 56
F P + L L+ H HP+R+ A G T DRF + +PY T+ W
Sbjct: 5 FAPRVRCYLKNLLEHTMQNLTTPHPIRLVSASHGGPKDGTKQLCDRFKISLPYAGQTVTW 64
Query: 57 DVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIW 116
+VI+ A P PPD IF +D F P E SL W+++D L +I
Sbjct: 65 EVIFQAHKPELPPDFIF--DDTSFLPNIEEVP----------SLCEWDSEDDQALTNVIQ 112
Query: 117 ELRDQYMSYQRKRVGEVDDD-RLKFEICTM-----LSREGIEMHMSSGVEKPEEVKFAVP 170
EL +QY +Q V +DD RL+FE ++ +S I++H++ V+F +
Sbjct: 113 ELLEQYRKHQ---VSMLDDSPRLQFEYSSLVHQSDISESNIQVHINKK-NPGSPVRFWIT 168
Query: 171 L-MDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHL--KLMSTPALKSLFSVD 227
L +D + V LQV + +P + +L +P +++L
Sbjct: 169 LPIDFSKLPPVFAKENLSEDMAILQVTF-------QSPEGSRILPQLFLSPRVEALGGSL 221
Query: 228 DVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRP-IETDSVF 286
VKLP + C+ +Y+P ++E LE++V + S R+ ++ A LFGR +E D+
Sbjct: 222 AVKLPSFSKDSCLMDYVPQVKELLEKKVEQVSSSFAKRKEYVAAFLNLFGRNLLEFDAEG 281
Query: 287 YRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPR 346
+ F F F+++ + FP+ +PSL QS+ Y S G P S TDYP+SPR
Sbjct: 282 FASLSFLFEHDDFFFILIIAIPRTFPQDKPSLTFQSA-YHTSCGWPY-SITCTDYPYSPR 339
Query: 347 WEHSQMAERTFEFLVDESVNFK 368
WE S+MA+R F++D +F+
Sbjct: 340 WEASEMADRARTFVMDYVPSFQ 361
>gi|327265242|ref|XP_003217417.1| PREDICTED: BRCA1-A complex subunit BRE-like [Anolis carolinensis]
Length = 383
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 160/330 (48%), Gaps = 31/330 (9%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
+ DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P D ++ N
Sbjct: 52 SCDRFKLHIPYAGETLKWDIIFNAHYPELPPDFIFG-EDAEFLP---------DPSALHN 101
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
LA+WN DP LL ++ EL QY +Q R+ E RL FE T+L + G M +
Sbjct: 102 -LASWNPSDPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIY 158
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHPQK--ISLQVIYPVNRKYVSAPS 208
+G + +F+ +P+ NI ++ P + L V + P
Sbjct: 159 AGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDANEDPGEDVALLSVSFEDTEATQVFP- 217
Query: 209 APHLKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRR 267
KL +P ++ +L + +P + G C+ +Y+P + + L +V + RR
Sbjct: 218 ----KLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRRE 273
Query: 268 FIEALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYF 326
+I A FG +E D+ + K + F FLV L FP+ QP+L QS +F
Sbjct: 274 YIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHF 333
Query: 327 NSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+ G + S +YP+SPRW+ ++MA+R
Sbjct: 334 TNSG-ELYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|73980043|ref|XP_850681.1| PREDICTED: BRCA1-A complex subunit BRE isoform 2 [Canis lupus
familiaris]
Length = 383
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY YQ R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQYQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|54020944|ref|NP_001005716.1| BRCA1-A complex subunit BRE [Xenopus (Silurana) tropicalis]
gi|82183544|sp|Q6DJ78.1|BRE_XENTR RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|49522321|gb|AAH75305.1| brain and reproductive organ-expressed (TNFRSF1A modulator)
[Xenopus (Silurana) tropicalis]
Length = 383
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 163/330 (49%), Gaps = 31/330 (9%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
+ DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P D ++ N
Sbjct: 52 SCDRFKLHIPYAGETLKWDIIFNATYPELPPDFIFG-EDAEFLP---------DPSALHN 101
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
LA WN DP LL ++ EL QY YQ R+ E RL FE T+ + G M +
Sbjct: 102 -LAEWNPSDPECLLLVVKELVQQYHQYQCSRLSE--SSRLMFEYQTLQEEPQYGENMEIY 158
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSA 209
+G + +F+ +P+ NI ++ P + ++L ++ + A +
Sbjct: 159 AGKKNNWTGEFSARFLLKLPVDFSNIPIYLLKDSNEDPGEDVAL-----LSVSFEDAEAT 213
Query: 210 PHL-KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRR 267
KL +P ++ +L + +P + G C+ +Y+P + + L +V + RR
Sbjct: 214 QVFPKLFLSPRIEHALGGSSALHIPAFPSGSCLIDYVPQVCQLLTNKVQYVIQGYHKRRE 273
Query: 268 FIEALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYF 326
+I A FG +E D+ + K ++ F FLV L FP+ QP+L QS +F
Sbjct: 274 YIAAFLSHFGTGVVEYDAEGFTKLTLLLSWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHF 333
Query: 327 NSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+ G + S +YP+SPRW+ ++MA+R
Sbjct: 334 TNSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|427779329|gb|JAA55116.1| Putative brain and reproductive organ-expressed protein
[Rhipicephalus pulchellus]
Length = 400
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 166/338 (49%), Gaps = 35/338 (10%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF + +PY T+ W+VI+ A P PPD IF +D F P E SL
Sbjct: 81 DRFKISLPYAGQTVTWEVIFQAHKPELPPDFIF--DDTSFLPNIEEVP----------SL 128
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDD-RLKFEICTM-----LSREGIEMH 154
W+++D L +I EL +QY +Q V +DD RL+FE ++ +S I++H
Sbjct: 129 CEWDSEDDQALTNVIQELLEQYRKHQ---VSMLDDSPRLQFEYSSLVHQSDISESNIQVH 185
Query: 155 MSSGVEKPEEVKFAVPL-MDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHL- 212
++ V+F + L +D + V LQV + +P +
Sbjct: 186 INKK-NPGSPVRFWITLPIDFSKLPPVFAKENLSEDMAILQVTF-------QSPEGSRIL 237
Query: 213 -KLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEA 271
+L +P +++L VKLP + C+ +Y+P ++E LE++V + S R+ ++ A
Sbjct: 238 PQLFLSPRVEALGGSLAVKLPSFSKDSCLMDYVPQVKELLEKKVEQVSSSFAKRKEYVAA 297
Query: 272 LAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQG 330
LFGR +E D+ + F F F+++ + FP+ +PSL QS+ Y S G
Sbjct: 298 FLNLFGRNLLEFDAEGFASLSFLFEHDDFFFILIIAIPRTFPQDKPSLTFQSA-YHTSCG 356
Query: 331 MPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFK 368
P S TDYP+SPRWE S+MA+R F++D +F+
Sbjct: 357 WPY-SITCTDYPYSPRWEASEMADRARTFVMDYVPSFQ 393
>gi|395828918|ref|XP_003787609.1| PREDICTED: LOW QUALITY PROTEIN: BRCA1-A complex subunit BRE
[Otolemur garnettii]
Length = 378
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 49 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPAALQN-L 97
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 98 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 155
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 156 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 211
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 212 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 271
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 272 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 331
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 332 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 357
>gi|40353757|ref|NP_954664.1| BRCA1-A complex subunit BRE isoform 2 [Homo sapiens]
gi|40353761|ref|NP_954661.1| BRCA1-A complex subunit BRE isoform 2 [Homo sapiens]
gi|114576713|ref|XP_001160262.1| PREDICTED: BRCA1-A complex subunit BRE isoform 5 [Pan troglodytes]
gi|114576715|ref|XP_001160569.1| PREDICTED: BRCA1-A complex subunit BRE isoform 11 [Pan troglodytes]
gi|296224219|ref|XP_002757959.1| PREDICTED: BRCA1-A complex subunit BRE isoform 1 [Callithrix
jacchus]
gi|332227064|ref|XP_003262708.1| PREDICTED: BRCA1-A complex subunit BRE isoform 1 [Nomascus
leucogenys]
gi|332227072|ref|XP_003262712.1| PREDICTED: BRCA1-A complex subunit BRE isoform 5 [Nomascus
leucogenys]
gi|390474626|ref|XP_002757960.2| PREDICTED: BRCA1-A complex subunit BRE isoform 2 [Callithrix
jacchus]
gi|397513750|ref|XP_003827172.1| PREDICTED: BRCA1-A complex subunit BRE isoform 1 [Pan paniscus]
gi|397513758|ref|XP_003827176.1| PREDICTED: BRCA1-A complex subunit BRE isoform 5 [Pan paniscus]
gi|403301824|ref|XP_003941577.1| PREDICTED: BRCA1-A complex subunit BRE isoform 1 [Saimiri
boliviensis boliviensis]
gi|403301830|ref|XP_003941580.1| PREDICTED: BRCA1-A complex subunit BRE isoform 4 [Saimiri
boliviensis boliviensis]
gi|426335116|ref|XP_004029079.1| PREDICTED: BRCA1-A complex subunit BRE isoform 1 [Gorilla gorilla
gorilla]
gi|426335122|ref|XP_004029082.1| PREDICTED: BRCA1-A complex subunit BRE isoform 4 [Gorilla gorilla
gorilla]
gi|75047938|sp|Q8WN70.1|BRE_SAGOE RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|229462810|sp|Q9NXR7.2|BRE_HUMAN RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|17530325|gb|AAL40810.1|AF440753_1 brain and reproductive organ-expressed protein [Saguinus oedipus]
gi|603445|gb|AAA64231.1| brain and reproductive organ-expressed protein [Homo sapiens]
gi|2353177|gb|AAB69387.1| brain and reproductive organ-expressed protein [Homo sapiens]
gi|12654817|gb|AAH01251.1| Brain and reproductive organ-expressed (TNFRSF1A modulator) [Homo
sapiens]
gi|39753938|gb|AAR30499.1| BRCA1/BRCA2-containing complex subunit 45 [Homo sapiens]
gi|119620952|gb|EAX00547.1| brain and reproductive organ-expressed (TNFRSF1A modulator),
isoform CRA_e [Homo sapiens]
gi|119620953|gb|EAX00548.1| brain and reproductive organ-expressed (TNFRSF1A modulator),
isoform CRA_e [Homo sapiens]
gi|123980722|gb|ABM82190.1| brain and reproductive organ-expressed (TNFRSF1A modulator)
[synthetic construct]
gi|123995551|gb|ABM85377.1| brain and reproductive organ-expressed (TNFRSF1A modulator)
[synthetic construct]
gi|307684490|dbj|BAJ20285.1| brain and reproductive organ-expressed [synthetic construct]
gi|410211054|gb|JAA02746.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
gi|410211060|gb|JAA02749.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
gi|410266152|gb|JAA21042.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
gi|410288758|gb|JAA22979.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
gi|410342467|gb|JAA40180.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
Length = 383
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|60825064|gb|AAX36705.1| brain and reproductive organ-expressed [synthetic construct]
Length = 384
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQTQKNYPYSPRWDGNEMAKRA 362
>gi|345782149|ref|XP_003432226.1| PREDICTED: BRCA1-A complex subunit BRE [Canis lupus familiaris]
Length = 430
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY YQ R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQYQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|344280453|ref|XP_003411998.1| PREDICTED: BRCA1-A complex subunit BRE-like [Loxodonta africana]
Length = 383
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDANEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|158255608|dbj|BAF83775.1| unnamed protein product [Homo sapiens]
Length = 383
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDLNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|40353755|ref|NP_954663.1| BRCA1-A complex subunit BRE isoform 3 [Homo sapiens]
gi|40353759|ref|NP_954662.1| BRCA1-A complex subunit BRE isoform 3 [Homo sapiens]
gi|332227068|ref|XP_003262710.1| PREDICTED: BRCA1-A complex subunit BRE isoform 3 [Nomascus
leucogenys]
gi|332227074|ref|XP_003262713.1| PREDICTED: BRCA1-A complex subunit BRE isoform 6 [Nomascus
leucogenys]
gi|332812833|ref|XP_003308989.1| PREDICTED: BRCA1-A complex subunit BRE [Pan troglodytes]
gi|332812836|ref|XP_003308990.1| PREDICTED: BRCA1-A complex subunit BRE [Pan troglodytes]
gi|390474628|ref|XP_003734810.1| PREDICTED: BRCA1-A complex subunit BRE [Callithrix jacchus]
gi|390474633|ref|XP_003734812.1| PREDICTED: BRCA1-A complex subunit BRE [Callithrix jacchus]
gi|397513754|ref|XP_003827174.1| PREDICTED: BRCA1-A complex subunit BRE isoform 3 [Pan paniscus]
gi|397513760|ref|XP_003827177.1| PREDICTED: BRCA1-A complex subunit BRE isoform 6 [Pan paniscus]
gi|403301828|ref|XP_003941579.1| PREDICTED: BRCA1-A complex subunit BRE isoform 3 [Saimiri
boliviensis boliviensis]
gi|403301834|ref|XP_003941582.1| PREDICTED: BRCA1-A complex subunit BRE isoform 6 [Saimiri
boliviensis boliviensis]
gi|16326573|gb|AAL17814.1|AF420602_1 BRE alpha b isoform [Homo sapiens]
gi|16326576|gb|AAL17816.1|AF420603_2 BRE beta b isoform [Homo sapiens]
gi|119620950|gb|EAX00545.1| brain and reproductive organ-expressed (TNFRSF1A modulator),
isoform CRA_d [Homo sapiens]
gi|119620951|gb|EAX00546.1| brain and reproductive organ-expressed (TNFRSF1A modulator),
isoform CRA_d [Homo sapiens]
gi|410211058|gb|JAA02748.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
gi|410266156|gb|JAA21044.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
gi|410288762|gb|JAA22981.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
gi|410342471|gb|JAA40182.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
Length = 376
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|148705440|gb|EDL37387.1| brain and reproductive organ-expressed protein, isoform CRA_d [Mus
musculus]
Length = 403
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 74 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 122
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 123 ASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 180
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 181 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 236
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 237 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 296
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 297 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 356
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 357 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 382
>gi|81864162|sp|Q6SP92.1|BRE_MESAU RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|38489074|gb|AAR21235.1| brain and reproductive organ-expressed protein [Mesocricetus
auratus]
Length = 383
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +++KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGESLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN DP LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSDPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|387912573|ref|NP_001248769.1| BRCA1-A complex subunit BRE isoform 4 [Homo sapiens]
gi|114576717|ref|XP_001160417.1| PREDICTED: BRCA1-A complex subunit BRE isoform 8 [Pan troglodytes]
gi|332227070|ref|XP_003262711.1| PREDICTED: BRCA1-A complex subunit BRE isoform 4 [Nomascus
leucogenys]
gi|397513756|ref|XP_003827175.1| PREDICTED: BRCA1-A complex subunit BRE isoform 4 [Pan paniscus]
gi|426335120|ref|XP_004029081.1| PREDICTED: BRCA1-A complex subunit BRE isoform 3 [Gorilla gorilla
gorilla]
gi|16326580|gb|AAL17818.1|AF420605_1 BRE alpha a' isoform [Homo sapiens]
Length = 379
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|41281924|ref|NP_851796.1| BRCA1-A complex subunit BRE isoform I [Mus musculus]
gi|22128540|gb|AAM92774.1| brain and reproductive organ-expressed isoform I [Mus musculus]
Length = 420
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 91 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 139
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 140 ASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 197
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 198 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 253
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 254 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 313
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 314 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 373
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 374 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 399
>gi|40538868|ref|NP_954891.1| BRCA1-A complex subunit BRE [Rattus norvegicus]
gi|81885356|sp|Q6P7Q1.1|BRE_RAT RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|38181561|gb|AAH61573.1| Brain and reproductive organ-expressed protein [Rattus norvegicus]
gi|149050715|gb|EDM02888.1| brain and reproductive organ-expressed protein, isoform CRA_a
[Rattus norvegicus]
Length = 383
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKEFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|149633555|ref|XP_001508890.1| PREDICTED: BRCA1-A complex subunit BRE-like [Ornithorhynchus
anatinus]
Length = 383
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 163/330 (49%), Gaps = 31/330 (9%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
+ DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P S +
Sbjct: 52 SCDRFKLHIPYAGETLKWDIIFNAHYPELPPDFIFG-EDAEFLP----------DPSALH 100
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
SLA+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M +
Sbjct: 101 SLASWNPSNPECLLMVVKELVQQYHLFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIY 158
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSA 209
+G + +F+ +P+ NI ++ P + ++L ++ + A +
Sbjct: 159 AGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDANEDPGEDVAL-----LSVSFEDAEAT 213
Query: 210 PHL-KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRR 267
KL +P ++ +L + +P + G C+ +Y+P + + L +V + RR
Sbjct: 214 QVFPKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRRE 273
Query: 268 FIEALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYF 326
+I A FG +E D+ + K + F FLV L FP+ QP+L QS +F
Sbjct: 274 YIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHF 333
Query: 327 NSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+ G + S +YP+SPRW+ ++MA+R
Sbjct: 334 TNSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|148705437|gb|EDL37384.1| brain and reproductive organ-expressed protein, isoform CRA_a [Mus
musculus]
Length = 362
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 33 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 81
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 82 ASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 139
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 140 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 195
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 196 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 255
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 256 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 315
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 316 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 341
>gi|390474630|ref|XP_003734811.1| PREDICTED: BRCA1-A complex subunit BRE [Callithrix jacchus]
Length = 379
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|75047937|sp|Q8WN69.1|BRE_CERAE RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|17530327|gb|AAL40811.1|AF440754_1 brain and reproductive organ-expressed protein [Chlorocebus
aethiops]
gi|380818216|gb|AFE80982.1| BRCA1-A complex subunit BRE isoform 2 [Macaca mulatta]
gi|383412765|gb|AFH29596.1| BRCA1-A complex subunit BRE isoform 2 [Macaca mulatta]
gi|384950494|gb|AFI38852.1| BRCA1-A complex subunit BRE isoform 2 [Macaca mulatta]
Length = 383
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDVEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|148705439|gb|EDL37386.1| brain and reproductive organ-expressed protein, isoform CRA_c [Mus
musculus]
Length = 426
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 97 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 145
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 146 ASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 203
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 204 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 259
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 260 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 319
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 320 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 379
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 380 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 405
>gi|41281940|ref|NP_851797.1| BRCA1-A complex subunit BRE isoform IV [Mus musculus]
gi|23194403|gb|AAN15148.1| brain and reproductive organ-expressed protein isoform IV [Mus
musculus]
Length = 374
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 45 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 93
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 94 ASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 151
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 152 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 207
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 208 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 267
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 268 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 327
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 328 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 353
>gi|403301832|ref|XP_003941581.1| PREDICTED: BRCA1-A complex subunit BRE isoform 5 [Saimiri
boliviensis boliviensis]
Length = 379
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|354468334|ref|XP_003496621.1| PREDICTED: BRCA1-A complex subunit BRE-like [Cricetulus griseus]
Length = 383
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|156121193|ref|NP_001095744.1| BRCA1-A complex subunit BRE [Bos taurus]
gi|149727664|ref|XP_001502067.1| PREDICTED: BRCA1-A complex subunit BRE-like isoform 1 [Equus
caballus]
gi|410955556|ref|XP_003984417.1| PREDICTED: BRCA1-A complex subunit BRE isoform 1 [Felis catus]
gi|426223334|ref|XP_004005830.1| PREDICTED: BRCA1-A complex subunit BRE isoform 1 [Ovis aries]
gi|426223336|ref|XP_004005831.1| PREDICTED: BRCA1-A complex subunit BRE isoform 2 [Ovis aries]
gi|229621692|sp|A6QQW8.1|BRE_BOVIN RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|151554604|gb|AAI50023.1| BRE protein [Bos taurus]
gi|296482313|tpg|DAA24428.1| TPA: brain and reproductive organ-expressed (TNFRSF1A modulator)
[Bos taurus]
gi|335775272|gb|AEH58516.1| BRCA1-A complex subunit BRE-like protein [Equus caballus]
Length = 383
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|355673450|gb|AER95176.1| brain and reproductive organ-expressed [Mustela putorius furo]
Length = 382
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 53 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 101
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 102 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 159
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 160 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 215
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 216 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 275
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 276 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 335
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 336 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 361
>gi|224047060|ref|XP_002186986.1| PREDICTED: BRCA1-A complex subunit BRE [Taeniopygia guttata]
Length = 383
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 31/330 (9%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
+ DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P D ++ N
Sbjct: 52 SCDRFKLHIPYAGETLKWDIIFNAHYPDLPPDFIFG-EDAEFLP---------DPSALHN 101
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M +
Sbjct: 102 -LASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIY 158
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSA 209
+G + +F+ +P+ NI ++ P + ++L ++ + A +
Sbjct: 159 AGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVAL-----LSVSFEDAEAT 213
Query: 210 PHL-KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRR 267
KL +P ++ +L + +P + G C+ +Y+P + + L +V + RR
Sbjct: 214 QVFPKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRRE 273
Query: 268 FIEALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYF 326
+I A FG +E D+ + K + F FLV L FP+ QP+L QS +F
Sbjct: 274 YIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHF 333
Query: 327 NSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+ G + S +YP+SPRW+ ++MA+R
Sbjct: 334 TNSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|56605910|ref|NP_001008458.1| BRCA1-A complex subunit BRE [Gallus gallus]
gi|326915296|ref|XP_003203955.1| PREDICTED: BRCA1-A complex subunit BRE-like [Meleagris gallopavo]
gi|82083020|sp|Q5ZML0.1|BRE_CHICK RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|53127300|emb|CAG31033.1| hypothetical protein RCJMB04_1l17 [Gallus gallus]
gi|449283261|gb|EMC89942.1| BRCA1-A complex subunit BRE [Columba livia]
Length = 383
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 31/330 (9%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
+ DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P D ++ N
Sbjct: 52 SCDRFKLHIPYAGETLKWDIIFNAHYPDLPPDFIFG-EDAEFLP---------DPSALHN 101
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M +
Sbjct: 102 -LASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIY 158
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSA 209
+G + +F+ +P+ NI ++ P + ++L ++ + A +
Sbjct: 159 AGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVAL-----LSVSFEDAEAT 213
Query: 210 PHL-KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRR 267
KL +P ++ +L + +P + G C+ +Y+P + + L +V + RR
Sbjct: 214 QVFPKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRRE 273
Query: 268 FIEALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYF 326
+I A FG +E D+ + K + F FLV L FP+ QP+L QS +F
Sbjct: 274 YIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHF 333
Query: 327 NSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+ G + S +YP+SPRW+ ++MA+R
Sbjct: 334 TNSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|338714386|ref|XP_003363063.1| PREDICTED: BRCA1-A complex subunit BRE-like isoform 3 [Equus
caballus]
Length = 379
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|338714384|ref|XP_003363062.1| PREDICTED: BRCA1-A complex subunit BRE-like isoform 2 [Equus
caballus]
Length = 376
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|21617851|ref|NP_653124.1| BRCA1-A complex subunit BRE isoform V [Mus musculus]
gi|229462863|sp|Q8K3W0.2|BRE_MOUSE RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|17530323|gb|AAL40809.1|AF440752_1 brain and reproductive organ-expressed protein [Mus musculus]
gi|26348937|dbj|BAC38108.1| unnamed protein product [Mus musculus]
gi|74142735|dbj|BAE33900.1| unnamed protein product [Mus musculus]
gi|148705441|gb|EDL37388.1| brain and reproductive organ-expressed protein, isoform CRA_e [Mus
musculus]
Length = 383
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|387916034|gb|AFK11626.1| BRCA1-A complex subunit BRE [Callorhinchus milii]
Length = 383
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 161/330 (48%), Gaps = 35/330 (10%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+N +P PPD IFG ED DF P + + L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNCHYPDLPPDFIFG-EDVDFLP----------EPTTLHHL 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIE----MHMS 156
WN+++P LL +I EL QY YQ R+ E RL FE + +EG E M +
Sbjct: 103 NAWNSQNPDCLLLVIKELVQQYYRYQCDRLHE--SSRLMFEYTAL--QEGPEFGDNMEIY 158
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSA 209
+G + +F+ +P+ NI ++ P P + ++L ++ + A +
Sbjct: 159 AGRKNNWTGEFSARFLLKLPVDFSNIPTYLLKDPTIDPGEDVAL-----LSVSFEDAEAT 213
Query: 210 PHL-KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRR 267
KL +P ++ +L + +PP+ G C+ +Y+P + + L +V + RR
Sbjct: 214 QVFPKLYLSPRIEHALGGNSALHIPPFPSGGCLIDYVPQVCQLLTNKVQYIIQGYHRRRE 273
Query: 268 FIEALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYF 326
+I A FG +E D+ + K + F FLV L FP+ QP+L QS +F
Sbjct: 274 YIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHF 333
Query: 327 NSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
S G + + YP+SPRW+ ++MA+R
Sbjct: 334 TSSGQ-LYQQIQKSYPYSPRWDGNEMAKRA 362
>gi|402890430|ref|XP_003908491.1| PREDICTED: BRCA1-A complex subunit BRE isoform 1 [Papio anubis]
gi|402890432|ref|XP_003908492.1| PREDICTED: BRCA1-A complex subunit BRE isoform 2 [Papio anubis]
Length = 376
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDVEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|126303110|ref|XP_001371289.1| PREDICTED: BRCA1-A complex subunit BRE-like [Monodelphis domestica]
Length = 383
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 161/330 (48%), Gaps = 31/330 (9%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
+ DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P D +++N
Sbjct: 52 SCDRFKLHIPYAGETLKWDIIFNAHYPELPPDFIFG-EDAEFLP---------DPSALQN 101
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
LA+W+ +P LL ++ EL QY +Q R+ E RL FE T+L + G M +
Sbjct: 102 -LASWDPSNPDCLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGEHMEIY 158
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHPQK--ISLQVIYPVNRKYVSAPS 208
+G + +F+ +P+ NI ++ P + L V + P
Sbjct: 159 AGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDANEDPGEDVALLSVSFEDTEATQVFP- 217
Query: 209 APHLKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRR 267
KL +P ++ +L + +P + G C+ +Y+P + + L +V + RR
Sbjct: 218 ----KLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRRE 273
Query: 268 FIEALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYF 326
+I A FG +E D+ + K + F FLV L FP+ QP+L QS +F
Sbjct: 274 YIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHF 333
Query: 327 NSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+ G + S +YP+SPRW+ ++MA+R
Sbjct: 334 TNSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|410955558|ref|XP_003984418.1| PREDICTED: BRCA1-A complex subunit BRE isoform 2 [Felis catus]
Length = 407
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|332227066|ref|XP_003262709.1| PREDICTED: BRCA1-A complex subunit BRE isoform 2 [Nomascus
leucogenys]
Length = 415
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|21361171|ref|NP_004890.2| BRCA1-A complex subunit BRE isoform 1 [Homo sapiens]
gi|332812831|ref|XP_001160523.2| PREDICTED: BRCA1-A complex subunit BRE isoform 10 [Pan troglodytes]
gi|397513752|ref|XP_003827173.1| PREDICTED: BRCA1-A complex subunit BRE isoform 2 [Pan paniscus]
gi|426335118|ref|XP_004029080.1| PREDICTED: BRCA1-A complex subunit BRE isoform 2 [Gorilla gorilla
gorilla]
gi|7019964|dbj|BAA90943.1| unnamed protein product [Homo sapiens]
gi|119620949|gb|EAX00544.1| brain and reproductive organ-expressed (TNFRSF1A modulator),
isoform CRA_c [Homo sapiens]
gi|410211056|gb|JAA02747.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
gi|410266154|gb|JAA21043.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
gi|410342469|gb|JAA40181.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
Length = 415
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|410288760|gb|JAA22980.1| brain and reproductive organ-expressed (TNFRSF1A modulator) [Pan
troglodytes]
Length = 415
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|410955560|ref|XP_003984419.1| PREDICTED: BRCA1-A complex subunit BRE isoform 3 [Felis catus]
gi|426223338|ref|XP_004005832.1| PREDICTED: BRCA1-A complex subunit BRE isoform 3 [Ovis aries]
Length = 379
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|197098910|ref|NP_001124759.1| BRCA1-A complex subunit BRE [Pongo abelii]
gi|75042568|sp|Q5REX9.1|BRE_PONAB RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|55725795|emb|CAH89678.1| hypothetical protein [Pongo abelii]
Length = 383
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L +PY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHMPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|403301826|ref|XP_003941578.1| PREDICTED: BRCA1-A complex subunit BRE isoform 2 [Saimiri
boliviensis boliviensis]
Length = 415
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|346466677|gb|AEO33183.1| hypothetical protein [Amblyomma maculatum]
Length = 344
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 162/338 (47%), Gaps = 35/338 (10%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF + +PY I W+VI+ A P PPD IF +D F P E SL
Sbjct: 25 DRFKISVPYAGQAITWEVIFQAHRPELPPDFIF--DDTTFQPNIEELP----------SL 72
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDD-RLKFEICTML-----SREGIEMH 154
WN++D L ++ EL +QY +Q V +DD RL+FE +++ + I++H
Sbjct: 73 CDWNSEDDQALTNVVHELLEQYRKHQ---VSMLDDSPRLQFEYSSLIHQSDIAESNIQVH 129
Query: 155 MSS-GVEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHL- 212
++ P +P+ I M I LQV + +P +
Sbjct: 130 LNKKNPGSPVRFWITLPIDFSGIPPMFAKENLSEDMAI-LQVTF-------QSPEGSRIL 181
Query: 213 -KLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEA 271
+L +P +++L S +KLPP+ C+ +Y+P +++ LE++V + + R+ ++ A
Sbjct: 182 PQLFLSPRVEALCSSVAIKLPPFNKDSCLMDYVPQVKQLLEKKVEQVSTSFAKRKEYVAA 241
Query: 272 LAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQG 330
FGR +E D+ + F F F++ L FP+ +PSL QS+ Y S G
Sbjct: 242 FLSHFGRNLLEFDAEGFASLSFLFEHDDFFFILSIALPQTFPQDKPSLTFQSA-YHTSCG 300
Query: 331 MPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFK 368
P S TDYP+SPRWE S+MA+R F+ + +F+
Sbjct: 301 WPY-SITCTDYPYSPRWEASEMADRARTFVTEYVPSFQ 337
>gi|119620947|gb|EAX00542.1| brain and reproductive organ-expressed (TNFRSF1A modulator),
isoform CRA_a [Homo sapiens]
Length = 536
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|297265689|ref|XP_001100101.2| PREDICTED: BRCA1-A complex subunit BRE isoform 3 [Macaca mulatta]
gi|355565574|gb|EHH22003.1| hypothetical protein EGK_05182 [Macaca mulatta]
gi|355751218|gb|EHH55473.1| hypothetical protein EGM_04686 [Macaca fascicularis]
Length = 415
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDVEFLP---------DPSALQN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|291386997|ref|XP_002709991.1| PREDICTED: brain and reproductive organ-expressed (TNFRSF1A
modulator) [Oryctolagus cuniculus]
Length = 383
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPCALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWRDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|426223340|ref|XP_004005833.1| PREDICTED: BRCA1-A complex subunit BRE isoform 4 [Ovis aries]
gi|426223342|ref|XP_004005834.1| PREDICTED: BRCA1-A complex subunit BRE isoform 5 [Ovis aries]
Length = 412
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|62955527|ref|NP_001017777.1| BRCA1-A complex subunit BRE [Danio rerio]
gi|82178198|sp|Q568D5.1|BRE_DANRE RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|62202292|gb|AAH92902.1| Brain and reproductive organ-expressed protein [Danio rerio]
Length = 386
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 156/324 (48%), Gaps = 23/324 (7%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA P PPD IFG ED DF P + + N L
Sbjct: 57 DRFKLHIPYAGETLKWDIIFNARDPELPPDFIFG-EDADFLP---------EPSELPN-L 105
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
+W++ P LL L+ E+ QY YQ +R+ D RL FE ++L G M + +G
Sbjct: 106 VSWDSGKPECLLLLVKEMLQQYHQYQCQRL--RDSSRLLFEYDSLLEDPNYGRNMEIYAG 163
Query: 159 VEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHL----KL 214
+ +F+ + + + P + +L V VS A KL
Sbjct: 164 RKNSWTGEFSARFL-LKLPVDFSNIPIYLLKDTALDPGEDVALLSVSFEDAEATQVFPKL 222
Query: 215 MSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALA 273
+P+++ +L + +P + G C+ +Y+P + + L +V + RR +I A
Sbjct: 223 YLSPSIEHALGGSSALHIPAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFL 282
Query: 274 PLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP 332
FG +E D+V + K + F FLV L FP+ QP+L QS +F S G
Sbjct: 283 SHFGMGVVEYDAVGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSIYHFTSSGQ- 341
Query: 333 IKSPLLTDYPWSPRWEHSQMAERT 356
+ S + YP+SPRW+ ++MA+R
Sbjct: 342 LYSQVQKSYPYSPRWDGNEMAKRA 365
>gi|348574526|ref|XP_003473041.1| PREDICTED: LOW QUALITY PROTEIN: BRCA1-A complex subunit BRE-like
[Cavia porcellus]
Length = 363
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 159/332 (47%), Gaps = 39/332 (11%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPLALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPANPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRK------------YVSA 206
+ +F ++++ P I L ++ VN +
Sbjct: 161 KKNNWVRRFK--------RRLLLFVPISF-SFIPLXILIDVNEDPGEDVALLSVSFEDTE 211
Query: 207 PSAPHLKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVR 265
+ + KL +P ++ +L + LP + G C+ +Y+P + L +V + R
Sbjct: 212 ATQVYPKLYLSPRIEHALGGSSALHLPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKR 271
Query: 266 RRFIEALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSM 324
R +I A FG +E D+ + K + F FLV L FP+ QP+L QS
Sbjct: 272 REYIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVY 331
Query: 325 YFNSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+F + G + S +YP+SPRW+ ++MA+R
Sbjct: 332 HFTNSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|351712982|gb|EHB15901.1| BRCA1-A complex subunit BRE, partial [Heterocephalus glaber]
Length = 320
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 161/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 11 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPLALHN-L 59
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 60 TSWNPANPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 117
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 118 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 173
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 174 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 233
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 234 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 293
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 294 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 319
>gi|148224488|ref|NP_001085651.1| BRCA1-A complex subunit BRE [Xenopus laevis]
gi|82184446|sp|Q6GPL9.1|BRE_XENLA RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
gi|49117024|gb|AAH73095.1| MGC83547 protein [Xenopus laevis]
Length = 384
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 164/331 (49%), Gaps = 32/331 (9%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
+ DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P D ++ N
Sbjct: 52 SCDRFKLHIPYAGETLKWDIIFNASYPELPPDFIFG-EDAEFLP---------DPSALHN 101
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
L+ WN DP LL ++ EL QY YQ R+ E RL FE T+ + G+ M +
Sbjct: 102 -LSEWNPSDPECLLLVVKELVQQYHQYQCSRLSE--SSRLMFEYQTLQEEPQYGLNMEIY 158
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSA 209
+G + +F+ +P+ NI ++ P + ++L ++ + A +
Sbjct: 159 AGKKNNWTGEFSARFLLKMPVDFSNIPIYLLKDSNEDPGEDVAL-----LSVSFEDAEAT 213
Query: 210 PHL-KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRR 267
KL +P ++ +L + +P + G C+ +Y+P + + L +V + RR
Sbjct: 214 QVFPKLFLSPRIEHALGGSSALHIPVFPSGSCLIDYVPQVCQLLTNKVQYVIQGYHKRRE 273
Query: 268 FIEALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLV-LFFLSTQFPKQQPSLMLQSSMY 325
+I A FG +E D+ + K ++ F FLV L FP+ QP+L QS +
Sbjct: 274 YIAAFLSHFGTGVVEYDAEGFTKLTLLLSWKDFCFLVHTVDLPLYFPRDQPTLTFQSVYH 333
Query: 326 FNSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
F + G + S +YP+SPRW+ ++MA+R
Sbjct: 334 FTNSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 363
>gi|443725221|gb|ELU12901.1| hypothetical protein CAPTEDRAFT_112865 [Capitella teleta]
Length = 382
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 170/336 (50%), Gaps = 26/336 (7%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF + IP+ ++ W++I+N FPH PPD IFG ++ +F P + ++K+ L
Sbjct: 55 DRFKVAIPFAGHSVDWEIIFNNSFPHDPPDFIFGSDERNFFP---------NVDNLKH-L 104
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS----REGIEMHMS 156
W+ DP LL ++ +L +Y + Q + + RL+FE +++ +E IE+H+S
Sbjct: 105 VDWDPSDPNALLLVLQDLLSEYKTLQHSLIDQ--HSRLQFEYSSLVEGGFRKEDIEVHVS 162
Query: 157 -SGVEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKIS--LQVIYPVNRKYVSAPSAPHLK 213
G K V F + L +++ + + +P + S L V +P +P L
Sbjct: 163 RRGENKYGPVNFLIKL-NVDFSGIPAYLTKDNPGEDSAVLLVSFPNPE---GGKGSPQL- 217
Query: 214 LMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALA 273
+S ++L ++++P + +G C+ +Y+P+++E L +V++ V + RR ++ A
Sbjct: 218 FLSPRVERALGGAMNLRIPGFPNGACLIDYVPNVQELLTNKVNQIVQSYDKRREYMSAFL 277
Query: 274 PLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP 332
FG IE DS + F F +++ LS FP++QP + S + NS P
Sbjct: 278 SHFGGSLIEQDSEGFSSISFLFEWHDFFYVLTVNLSLVFPQEQPIFVFSSVYHENSLREP 337
Query: 333 IKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFK 368
+ DYP+SPRW +MA R F++D +F+
Sbjct: 338 FHKE-VRDYPYSPRWSAQEMASRARAFILDHIGSFQ 372
>gi|38173925|gb|AAH61000.1| Brain and reproductive organ-expressed protein [Mus musculus]
Length = 383
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 161/327 (49%), Gaps = 29/327 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+ N +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASRNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIA 276
Query: 271 ALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQ 329
A FG +E D+ + K + F FLV L FP+ QP+L QS +F +
Sbjct: 277 AFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNS 336
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERT 356
G + S +YP+SPRW+ ++MA+R
Sbjct: 337 GQ-LYSQAQKNYPYSPRWDGNEMAKRA 362
>gi|432941425|ref|XP_004082845.1| PREDICTED: BRCA1-A complex subunit BRE-like [Oryzias latipes]
Length = 386
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 161/343 (46%), Gaps = 30/343 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IP+ T+KWD+I+NA +P PPD IFG ED +F P +E L
Sbjct: 57 DRFKLHIPFAGQTLKWDIIFNARYPALPPDFIFG-EDTEFLPEPSE----------LPHL 105
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGI--EMHMSSG 158
W+ +P LL L+ EL QY YQ +R+ E RL FE ++L M + +G
Sbjct: 106 VQWDAGNPESLLQLVKELIQQYHLYQCQRLRE--SSRLLFEYDSLLEDPSYSRNMEIYAG 163
Query: 159 VEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHL----KL 214
++ +F+ + + + P + +L V VS A KL
Sbjct: 164 LKNSWTGEFSARFL-LKLPVDFSNIPVYLLKDTALDPGEDVALLSVSFEDAEATQVFPKL 222
Query: 215 MSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALA 273
+P+++ +L + +P + G C+ +Y+P + + L +V + RR +I A
Sbjct: 223 YLSPSIEHALGGSSALHIPAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFL 282
Query: 274 PLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP 332
FG + E D+ + K + F FLV L FP+ QP+L QS +F S G
Sbjct: 283 SHFGMGVVEYDAEGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSVYHFTSSGQ- 341
Query: 333 IKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKKYCNEAQ 375
+ S + T YP+SPRW+ ++MA+R V+FK + + Q
Sbjct: 342 LYSQVQTSYPYSPRWDGNEMAKRA-------KVHFKNFIPQFQ 377
>gi|390359223|ref|XP_796419.3| PREDICTED: BRCA1-A complex subunit BRE-like [Strongylocentrotus
purpuratus]
Length = 382
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 164/339 (48%), Gaps = 24/339 (7%)
Query: 38 NTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIK 97
N+ DRF ++IPY +++ W VI+++ P PPD IF D F P D +K
Sbjct: 52 NSCDRFKVIIPYAGNSLTWQVIFDSLHPSLPPDFIFDVHDRAFAP---------DLEELK 102
Query: 98 NSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSRE---GIEMH 154
L W++ +P L+ +I EL QY YQ + +G + RL+FE +++ +E+H
Sbjct: 103 -CLVNWDHTEPKSLVFVIRELLSQYKKYQERLLGS--NARLQFEYVSLVETSHFTDVEVH 159
Query: 155 M--SSGVEKPEEVKFAVPL-MDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPH 211
+ + V F + L +D K + + + ++ + ++P
Sbjct: 160 QVQKTSYARDTVVNFLIKLPVDF---KDIPAYLIKDNPGDDIAILLVSFQGIDGNKASPQ 216
Query: 212 LKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEA 271
L +S ++L +++P + + + EY + E L+ V + V + R+ F+ A
Sbjct: 217 L-FLSPRVERALGGSSSLRIPAFSNRGHLTEYTGLILELLQNLVEQVVKGYQKRKEFVAA 275
Query: 272 LAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQG 330
L +GR +E DS Y K+ F F F++ + + FP++QP + QS + S G
Sbjct: 276 LISHYGRSCLEFDSEGYSKASFLFELQEFHFILHVRIPSFFPREQPEFVFQSVYHTTSSG 335
Query: 331 MPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKK 369
P ++ ++ +YP+SPRW ++MAER ++ +FK+
Sbjct: 336 KPFQA-VVANYPYSPRWSGNEMAERAKVYMEQYIQDFKR 373
>gi|410897683|ref|XP_003962328.1| PREDICTED: BRCA1-A complex subunit BRE-like [Takifugu rubripes]
Length = 386
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 154/324 (47%), Gaps = 23/324 (7%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P +E L
Sbjct: 57 DRFKLHIPYAGETLKWDIIFNARYPELPPDFIFG-EDAEFLPEPSE----------LPHL 105
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
W+ + LL L+ EL QY +YQ +R+ E RL FE ++L G M + +G
Sbjct: 106 VQWDAGNSECLLQLVKELLQQYHNYQCERLRE--SSRLLFEYDSLLEDPSYGRNMEIYAG 163
Query: 159 VEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHL----KL 214
+ +F+ + + + P + +L V VS A KL
Sbjct: 164 KKNSWTGEFSARFL-LKLPVDFSNIPVYLLKDTALDPGEDVALLSVSFEDAEATQVFPKL 222
Query: 215 MSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALA 273
+P+++ +L + +P + G C+ +Y+P + + L +V + RR +I A
Sbjct: 223 YLSPSIEHALGGSSALHIPAFPSGGCLIDYVPQVCQLLTSKVQYVIQGYHKRREYIAAFL 282
Query: 274 PLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP 332
FG +E D+ + K + F FLV L FP+ QP+L QS +F + G
Sbjct: 283 SHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSVYHFTNSGQ- 341
Query: 333 IKSPLLTDYPWSPRWEHSQMAERT 356
+ S + YP+SPRW+ ++MA+R
Sbjct: 342 LYSQVQKSYPYSPRWDGNEMAKRA 365
>gi|348515935|ref|XP_003445495.1| PREDICTED: BRCA1-A complex subunit BRE-like [Oreochromis niloticus]
Length = 386
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 153/324 (47%), Gaps = 23/324 (7%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P +E L
Sbjct: 57 DRFKLHIPYAGETLKWDIIFNACYPELPPDFIFG-EDAEFLPEPSE----------LPHL 105
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
W+ +P LL L+ EL QY YQ R+ E RL FE ++L G M + +G
Sbjct: 106 VHWDAGNPECLLQLVKELIQQYHHYQCLRLRE--SSRLLFEYDSLLEDPNYGRNMEIYAG 163
Query: 159 VEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHL----KL 214
+ +F+ + + + P + +L V VS A KL
Sbjct: 164 HKNSWTGEFSARFL-LKLPVDFSNIPIYLLKDTALDPGEDVALLSVSFEDAEATQVFPKL 222
Query: 215 MSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALA 273
+P+++ +L + +P + G C+ +Y+P + + L +V + RR +I A
Sbjct: 223 YLSPSIEHALGGSSALHIPAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFL 282
Query: 274 PLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP 332
FG + E D+ + K + F FLV L FP+ QP+L QS +F + G
Sbjct: 283 SHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSVYHFTNSGQ- 341
Query: 333 IKSPLLTDYPWSPRWEHSQMAERT 356
+ S + YP+SPRW+ ++MA+R
Sbjct: 342 LYSQVQKSYPYSPRWDGNEMAKRA 365
>gi|405961902|gb|EKC27637.1| BRCA1-A complex subunit BRE [Crassostrea gigas]
Length = 355
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 171/357 (47%), Gaps = 34/357 (9%)
Query: 25 VRVEQAWSGS---KYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFH 81
RV SGS + S + DRF + IPY TI W+VI + P PPD IF ED DF
Sbjct: 13 TRVNDVKSGSSTLRKSPSGDRFKIYIPYAGQTITWEVILDNSCPEEPPDFIF--EDSDFC 70
Query: 82 PFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFE 141
P + IK SL W+ DP L +I EL Y ++ + + RL+FE
Sbjct: 71 P---------NVADIK-SLVNWDIGDPHCLTKVIRELLVHYKTFHERLLEA--HSRLQFE 118
Query: 142 ICTM-----LSREGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKIS--LQ 194
++ LSR+ IE++ +K + F + L ++ + + +P + S L
Sbjct: 119 YSSLLDQTELSRDLIEVYSERTEKKIGPINFLIKL-PVDFSDIPPYLTKDNPGENSAVLL 177
Query: 195 VIYPVNRKYVSAPSAPHLKLMSTPALKSLF-SVDDVKLPPWLDGMCMAEYLPHLEEALER 253
+++P S+ P L L +P ++ F ++++P + G C+ +Y+P + + L+
Sbjct: 178 ILFPSPD---SSRVTPQLYL--SPRVEHAFGGSGNLRIPAFPSGGCLLDYVPDVYKLLQN 232
Query: 254 QVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFP 312
+V + V + E R+ + A FGR + E D+ + F F F++ L+ FP
Sbjct: 233 KVEKTVQIYERRKELMAAFLSHFGRSVLEFDADGFFDISFLFEWNDFFFILYIELAPSFP 292
Query: 313 KQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKK 369
++ P L Q S+Y S+ P S + YP+SPRW +MA R +++D F+K
Sbjct: 293 QEAPVLTFQ-SIYHESKEKPY-SEVHDKYPYSPRWSGPEMATRIKTYILDNIQAFQK 347
>gi|229621693|sp|B6NXD5.1|BRE_BRAFL RecName: Full=BRCA1-A complex subunit BRE; AltName:
Full=BRCA1/BRCA2-containing complex subunit 45; AltName:
Full=Brain and reproductive organ-expressed protein
Length = 383
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 160/338 (47%), Gaps = 27/338 (7%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF + IP+ D++KW+VI+++ P PPD IF E+ +F P D ++N L
Sbjct: 56 DRFKIYIPFAGDSLKWEVIFDSCQPSNPPDFIFLGENGNFDP---------DIEKLEN-L 105
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSREG---IEMHMSS 157
W+ K+P L+ I +L +Y YQ++ + RL+FE ++ E +E+HM +
Sbjct: 106 THWDPKNPESLVLAIEDLMREYRCYQKQLIEGYS--RLQFEYSSLQGMEACDDVEVHMGN 163
Query: 158 ----GVEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLK 213
++ P +P+ I + +V + L V+ + P L
Sbjct: 164 RLPGTLDSPVNFLIRLPIDLSPIPQYLV----KDDPGEDLAVLLAKFHNSEGSRVTPQL- 218
Query: 214 LMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALA 273
+S +L +++P + G C+ +Y+P +++ L++Q+ V + RR ++ A
Sbjct: 219 FLSPKVEHALGDNTALRIPRFPTGGCLMDYVPQVQDFLQKQIDHIVEGYQRRREYVAAFI 278
Query: 274 PLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFN-SQGM 331
FG + E D+ + K + F F++ L ++FP+ P QS + + + G
Sbjct: 279 SRFGGSVLEYDAESFTKLSLVLEWNEFFFVLHIELPSRFPQDMPVFTFQSCYHLSKTNGE 338
Query: 332 PIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKK 369
P S + YP+SPRW +MA R F++D FKK
Sbjct: 339 PYVS-VQKSYPYSPRWTGEEMAHRAKLFILDFIPQFKK 375
>gi|442754065|gb|JAA69192.1| Putative protein bre [Ixodes ricinus]
Length = 369
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 176/386 (45%), Gaps = 45/386 (11%)
Query: 3 YDGFPP----FISAQLHYLINHF--AHPVRVEQAWSGSKYSNT---LDRFTLLIPYCLDT 53
Y F P ++ A L Y + + H VRV A G T DRF LL+PY +
Sbjct: 2 YSSFAPHVRNYLQALLEYAVQNLKTTHAVRVISAGEGGPRDGTRQFCDRFKLLLPYAGQS 61
Query: 54 IKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLA 113
+ W+VI+ A P PPD IF +D F P + G D + + +
Sbjct: 62 VTWEVIFQAHRPEFPPDFIF--DDMSFLPKIEDIPGLWDWDADDDGAL----------VK 109
Query: 114 LIWELRDQYMSYQRKRVGEVDDD--RLKFEICTMLSRE-----GIEMHMSSGVEKPEEVK 166
+++EL D+Y RK + DD RL+FE +++ + I++H++ V+
Sbjct: 110 VVFELLDEY----RKHQASLLDDFPRLQFEYSSLVHQSDIPETNIQVHLNRK-NPGSAVR 164
Query: 167 F--AVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALK-SL 223
F +P++ + + I LQV + P +L +P ++ L
Sbjct: 165 FWITLPVVFSRLPPVFTKENLSEDTAI-LQVTFQTPEGSRILP-----QLFLSPRVEEGL 218
Query: 224 FSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRP-IET 282
+K+P + C+ +Y+P +++ LE +V + + R+ +I A LFGR IE
Sbjct: 219 GGTMSLKIPAFSKDGCLMDYVPLVKQLLENKVEQVSTSFAKRKEYISAFLSLFGRSLIEF 278
Query: 283 DSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYP 342
DS + F F F++ + FP +PSL QS+ Y S G P + TDYP
Sbjct: 279 DSEGFGSISFLFEHDDFFFILNISIPRSFPHDKPSLTFQSA-YHASGGWPY-TITCTDYP 336
Query: 343 WSPRWEHSQMAERTFEFLVDESVNFK 368
+SPRW+ S+MA+R F+++ NF+
Sbjct: 337 YSPRWDPSEMADRARVFVMEYVPNFQ 362
>gi|156361108|ref|XP_001625362.1| predicted protein [Nematostella vectensis]
gi|156212192|gb|EDO33262.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 27/337 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF ++IP+ T++W+VI++ PPD+ FG D F P D S++ L
Sbjct: 1 DRFKVVIPFAGQTLRWEVIFSDV--DMPPDLSFGSHDAGFVP---------DITSLQ-FL 48
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSRE---GIEMHMSS 157
+W+ DP L++L+ EL QY YQ V + RL+F+ + S E E+
Sbjct: 49 NSWDLDDPNSLVSLLQELIGQYKQYQADLVARIP--RLQFDCDFLTSSEEYSDFEILSFR 106
Query: 158 GVEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMST 217
G + E + + ++++ + +P K ++ S P KL +
Sbjct: 107 GNQSYENIVNIFIRIPVDLDSIPPYLIAENPGKDIACLLISYQSPEGSVQVTP--KLFLS 164
Query: 218 PALKSLFS-VDDVKLPPW--LDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAP 274
P L+ F + +PPW +G C+ +Y+P + + L+++V S +R+ + A
Sbjct: 165 PRLERAFGRSSSLHIPPWGGQNGSCLMDYVPAVHQMLKQKVKAVSSGYRLRKDYASAFLS 224
Query: 275 LFGRPI-ETDS-VFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP 332
LFG + E D+ F+ S+ F G F ++ LS FP +PS L S+Y S G+P
Sbjct: 225 LFGGSVLEYDAGKFHSLSLLFKVQG-FCCILKIHLSVGFPLDKPSFTLH-SIYHESNGIP 282
Query: 333 IKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKK 369
+Y +SPRW S+MAE +L+ FK+
Sbjct: 283 YHEE-HKNYSYSPRWSPSEMAEAARSYLLQAVPEFKE 318
>gi|41281930|ref|NP_851798.1| BRCA1-A complex subunit BRE isoform III [Mus musculus]
gi|22128546|gb|AAM92777.1| brain and reproductive organ-expressed isoform III [Mus musculus]
Length = 319
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 29/311 (9%)
Query: 57 DVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIW 116
D+I+NA++P PPD IFG ED +F P D ++ N LA+WN +P LL ++
Sbjct: 6 DIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-LASWNPSNPECLLLVVK 54
Query: 117 ELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSGVEKPEEVKFA------ 168
EL QY +Q R+ E RL FE T+L + G M + +G + +F+
Sbjct: 55 ELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLK 112
Query: 169 VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPHLKLMSTPALK-SLFSV 226
+P+ NI ++ P + ++L + + + + KL +P ++ +L
Sbjct: 113 LPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----YPKLYLSPRIEHALGGS 168
Query: 227 DDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSV 285
+ +P + G C+ +Y+P + L +V + RR +I A FG + E D+
Sbjct: 169 SALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAE 228
Query: 286 FYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSP 345
+ K + F FLV L FP+ QP+L QS +F + G + S +YP+SP
Sbjct: 229 GFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQ-LYSQAQKNYPYSP 287
Query: 346 RWEHSQMAERT 356
RW+ ++MA+R
Sbjct: 288 RWDGNEMAKRA 298
>gi|148705438|gb|EDL37385.1| brain and reproductive organ-expressed protein, isoform CRA_b [Mus
musculus]
Length = 348
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 29/311 (9%)
Query: 57 DVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIW 116
D+I+NA++P PPD IFG ED +F P D ++ N LA+WN +P LL ++
Sbjct: 35 DIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-LASWNPSNPECLLLVVK 83
Query: 117 ELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSGVEKPEEVKFA------ 168
EL QY +Q R+ E RL FE T+L + G M + +G + +F+
Sbjct: 84 ELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLK 141
Query: 169 VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPHLKLMSTPALK-SLFSV 226
+P+ NI ++ P + ++L + + + + KL +P ++ +L
Sbjct: 142 LPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----YPKLYLSPRIEHALGGS 197
Query: 227 DDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSV 285
+ +P + G C+ +Y+P + L +V + RR +I A FG + E D+
Sbjct: 198 SALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAE 257
Query: 286 FYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSP 345
+ K + F FLV L FP+ QP+L QS +F + G + S +YP+SP
Sbjct: 258 GFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQ-LYSQAQKNYPYSP 316
Query: 346 RWEHSQMAERT 356
RW+ ++MA+R
Sbjct: 317 RWDGNEMAKRA 327
>gi|427796913|gb|JAA63908.1| Putative brain and reproductive organ-expressed protein, partial
[Rhipicephalus pulchellus]
Length = 448
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 23/280 (8%)
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDD-RLKFEICTM-----LSREGIE 152
SL W+++D L +I EL +QY +Q V +DD RL+FE ++ +S I+
Sbjct: 175 SLCEWDSEDDQALTNVIQELLEQYRKHQ---VSMLDDSPRLQFEYSSLVHQSDISESNIQ 231
Query: 153 MHMSSGVEKPEEVKFAVPL-MDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPH 211
+H++ V+F + L +D + V LQV + +P
Sbjct: 232 VHINKK-NPGSPVRFWITLPIDFSKLPPVFAKENLSEDMAILQVTF-------QSPEGSR 283
Query: 212 L--KLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFI 269
+ +L +P +++L VKLP + C+ +Y+P ++E LE++V + S R+ ++
Sbjct: 284 ILPQLFLSPRVEALGGSLAVKLPSFSKDSCLMDYVPQVKELLEKKVEQVSSSFAKRKEYV 343
Query: 270 EALAPLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNS 328
A LFGR +E D+ + F F F+++ + FP+ +PSL QS+ Y S
Sbjct: 344 AAFLNLFGRNLLEFDAEGFASLSFLFEHDDFFFILIIAIPRTFPQDKPSLTFQSA-YHTS 402
Query: 329 QGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFK 368
G P S TDYP+SPRWE S+MA+R F++D +F+
Sbjct: 403 CGWPY-SITCTDYPYSPRWEASEMADRARTFVMDYVPSFQ 441
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 16/112 (14%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF + +PY T+ W+VI+ A P PPD IF +D F P E SL
Sbjct: 6 DRFKISLPYAGQTVTWEVIFQAHKPELPPDFIF--DDTSFLPNIEEVP----------SL 53
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDD-RLKFEICTMLSREGI 151
W+++D L +I EL +QY +Q V +DD RL+FE +++ + I
Sbjct: 54 CEWDSEDDQALTNVIQELLEQYRKHQ---VSMLDDSPRLQFEYSSLVHQSDI 102
>gi|307174740|gb|EFN65095.1| Protein BRE [Camponotus floridanus]
Length = 380
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 165/341 (48%), Gaps = 39/341 (11%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN-- 98
D F L IPY + + W V++++++P PD IF D+ F + D ++
Sbjct: 51 DCFKLSIPYAGEHLVWSVLFDSQYPEMGPDFIFN--DQSFL-------ADPDINTLSTWI 101
Query: 99 -SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTM-----LSREGIE 152
SL WN D LL ++ EL Y +Q +G+ DRL+FE T+ +SRE IE
Sbjct: 102 PSLTKWNPNDIDALLNVLSELLLYYKEHQLHLLGK-QGDRLQFEYSTLVGETEISREDIE 160
Query: 153 MHMSSGVEKPEEVKFAVPL-MDMN-----INKMVVGCPWRHPQKISLQVIYPVNRKYVSA 206
+ M KP E +F + + MD + INK ++ + + + + Y + +
Sbjct: 161 VIMLPLGTKPTEARFLIRIVMDYSRLPPRINKS------QNDEAMLIIMFYGPDWNRI-- 212
Query: 207 PSAPHLKLMSTPALKSLFSV-DDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVR 265
P L L T L+ +F + + +PP+ + +Y+P +++ ++ ++ V E R
Sbjct: 213 --IPQLYLSKT--LEDIFGGPESLHIPPFPSSKYLMDYVPEVKKFIDEKIHNVVQSFESR 268
Query: 266 RRFIEAL-APLFGRPIETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSM 324
+ FI L G +E D++ + + F FL+ F L + FPK++P + LQS
Sbjct: 269 KSFITVLIVSQRGSILEYDAIEFNWISMLLEHRDFHFLIHFHLPSTFPKEKPQITLQSVY 328
Query: 325 YFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESV 365
+ SQG K +L D P+SPRW+ M ++ ++++ +V
Sbjct: 329 HMTSQGTLYKE-VLDDTPYSPRWQIILMVDKLLTYIMENAV 368
>gi|332017938|gb|EGI58587.1| BRCA1-A complex subunit BRE [Acromyrmex echinatior]
Length = 380
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 173/354 (48%), Gaps = 33/354 (9%)
Query: 24 PVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83
P++++ S S N D F LLIPY + + W+V+++++ P PD IF + F
Sbjct: 35 PIKLDSV-SSSCNKNKNDCFKLLIPYAGEHLMWNVLFDSQCPEMGPDFIFNDQT-----F 88
Query: 84 YNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEIC 143
+ + S + SL WN + LL ++ EL Y +Q + +G+ DRL+ E
Sbjct: 89 LMDPDIDILSTWVP-SLVKWNPNNTDALLNVLMELLLYYKEHQIQLLGK-QGDRLQLEYS 146
Query: 144 TM-----LSREGIEMHMSSGVEKPEEVKFAVPL-MDMN-----INKMVVGCPWRHPQKIS 192
T+ + +E IE+ + G+ KP E +F + + MD INK ++ + +
Sbjct: 147 TLVGETEICKEDIEVMLLLGL-KPMEARFLIRISMDYTRLPPRINKS------QNDEAML 199
Query: 193 LQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALE 252
L Y + +S P L L T ++ + + +PP + +Y+P + + +E
Sbjct: 200 LVTFYGPDWNRIS----PQLYLSKTLE-DAIGRPESLHIPPLPPNKYLMDYVPEVIKFME 254
Query: 253 RQVSEAVSLIEVRRRFIEALAPL-FGRPIETDSVFYRKSMFFVASGAFSFLVLFFLSTQF 311
+++ AV E R+ FI L L G +E D++ + + + F FL+ F L + F
Sbjct: 255 EKINSAVQCFENRKEFIVFLLVLQRGSIVEYDAIEFNWIIILLEHRDFHFLIHFNLPSIF 314
Query: 312 PKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESV 365
PK++P + LQS + SQG+ + +L D P+SPRW M ++ ++++ +V
Sbjct: 315 PKEKPQITLQSVYHMTSQGI-LYREVLDDAPYSPRWPMKLMVDKLLTYIIENAV 367
>gi|307194385|gb|EFN76708.1| Protein BRE [Harpegnathos saltator]
Length = 384
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 168/368 (45%), Gaps = 37/368 (10%)
Query: 17 LINHFAHPVRVEQAWSGSKYS--------NTLDRFTLLIPYCLDTIKWDVIYNAEFPHAP 68
L+ H R+ ++ G K + ++ D + L IPY + + W V++++++P
Sbjct: 22 LLKRVLHSKRLGISYGGVKLNKGPTSCNKSSNDCYKLTIPYAYENLLWTVLFDSQYPEIG 81
Query: 69 PDIIFGPEDEDFHPFYNESGGEGDSRSIK-NSLATWNNKDPTRLLALIWELRDQYMSYQR 127
PD IF + P + D S K SL W+ D LL ++ EL Y +Q
Sbjct: 82 PDFIFNDQTFLMDP-------DIDILSTKVPSLVKWDPTDSDALLNVLVELLLYYKEHQI 134
Query: 128 KRVGEVDDDRLKFEICTMLSR-----EGIEMHMSSGVEKPEEVKFAVPLMDMNINKMVVG 182
+ + + DRL+FE T++ + IE+ + KP E +F L+ ++++ +
Sbjct: 135 ESLAQ-QGDRLQFEYSTLVGNTELHVDDIEVILLPLGGKPVEARF---LIRISMDCCLPP 190
Query: 183 CPWR-HPQKISLQVIY--PVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPW-LDGM 238
C + H + L + + P + + P L L T K+ D + LPP+
Sbjct: 191 CVDKLHDNETMLHITFYGPDWNRII-----PKLYLSKTLE-KAFGGPDSLHLPPFPPTTK 244
Query: 239 CMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRP-IETDSVFYRKSMFFVASG 297
+ +Y+P +++ +E +++ V E R+ F+ AL + +E D+ + +
Sbjct: 245 YLMDYVPEVKKYIEEKINAVVECFEKRKDFLAALLMIQSCSLLEYDTKEFDYCTIMLEQL 304
Query: 298 AFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTF 357
F LV F+L FPK+ P + L S + QG K +L D P+SPRW QM +
Sbjct: 305 DFHVLVHFYLPPGFPKESPQITLYSVYHMTPQGAMYKE-VLEDVPYSPRWSMHQMVIKCL 363
Query: 358 EFLVDESV 365
++D++V
Sbjct: 364 THIMDKAV 371
>gi|413947958|gb|AFW80607.1| putative peptidase M48 family protein [Zea mays]
Length = 509
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 122 YMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLM----DMNIN 177
Y+ YQ++RV VDD RL FE+ T LS+EGIE+ M ++P++ KF VPL+ D I
Sbjct: 374 YIEYQKERVHMVDDARLAFELSTDLSKEGIEVCMVPSADRPDDAKFVVPLLESDFDFAIA 433
Query: 178 KMVVGCPWRHPQKISLQVI 196
K+V GCPWR PQKI LQ +
Sbjct: 434 KLVPGCPWRLPQKIHLQAV 452
>gi|344242232|gb|EGV98335.1| BRCA1-A complex subunit BRE [Cricetulus griseus]
Length = 288
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 29/262 (11%)
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
+LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M +
Sbjct: 2 NLASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIY 59
Query: 157 SGVEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMS 216
+G + +V P D+ + + + +YP KL
Sbjct: 60 AGKKNNWDVN-EDPGEDVALLSVSF-------EDTEATQVYP--------------KLYL 97
Query: 217 TPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPL 275
+P ++ +L + +P + G C+ +Y+P + L +V + RR +I A
Sbjct: 98 SPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSH 157
Query: 276 FGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIK 334
FG + E D+ + K + F FLV L FP+ QP+L QS +F + G +
Sbjct: 158 FGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQ-LY 216
Query: 335 SPLLTDYPWSPRWEHSQMAERT 356
S +YP+SPRW+ ++MA+R
Sbjct: 217 SQAQKNYPYSPRWDGNEMAKRA 238
>gi|440899099|gb|ELR50465.1| BRCA1-A complex subunit BRE, partial [Bos grunniens mutus]
Length = 265
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
+LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M +
Sbjct: 3 NLASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIY 60
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSA 209
+G + +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 61 AGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFED----TEATQ 116
Query: 210 PHLKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRF 268
+ KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +
Sbjct: 117 VYPKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREY 176
Query: 269 IEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFN 327
I A FG + E D+ + K + F FLV L FP+ QP+L QS +F
Sbjct: 177 IAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFT 236
Query: 328 SQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+ G + S +YP+SPRW+ ++MA+R
Sbjct: 237 NSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 264
>gi|34528540|dbj|BAC85532.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 18/269 (6%)
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
+LA+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M +
Sbjct: 110 NLASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIY 167
Query: 157 SGVEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSA 209
+G + +F+ +P+ NI ++ P + ++L + + +
Sbjct: 168 AGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV--- 224
Query: 210 PHLKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRF 268
+ KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +
Sbjct: 225 -YPKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREY 283
Query: 269 IEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFN 327
I A FG + E D+ + K + F FLV L FP+ QP+L QS +F
Sbjct: 284 IAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFT 343
Query: 328 SQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+ G + S +YP+SPRW+ ++MA+R
Sbjct: 344 NSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 371
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 16/117 (13%)
Query: 45 LLIPYCLDTIK-WDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATW 103
+L P L +++ WD+I+NA++P PPD IFG ED +F P D +++N LA+W
Sbjct: 1 MLAPCFLYSLQNWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN-LASW 49
Query: 104 NNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
N +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 50 NPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 104
>gi|383847609|ref|XP_003699445.1| PREDICTED: BRCA1-A complex subunit BRE-like [Megachile rotundata]
Length = 378
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 152/337 (45%), Gaps = 20/337 (5%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN-S 99
DRF L IPY + W+V ++++ P PD IF D F + + D+ S K S
Sbjct: 51 DRFRLSIPYARQNLTWNVFFDSQCPEIGPDFIFN--DNTFL-----ADMDIDTLSAKVPS 103
Query: 100 LATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEI---CTMLSREGIEMHMS 156
L WN + LL ++ EL Y YQ + + + + +L++++ T++ E +EM +
Sbjct: 104 LTKWNPNNTNALLNVLTELLSCYKQYQMQLLQKQERLQLEYDMLMKSTLVKPEDVEMILL 163
Query: 157 SGVEKPEEVKFAVPLMDMNINKM-VVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLM 215
KP E +F + L ++++++ C + V + V+ P L L
Sbjct: 164 PSGSKPTEARFLINL-SVDVSQLESRTCDSETDTAMLFIVFSGTDWNRVT----PQLYLS 218
Query: 216 STPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEA-LAP 274
T K+ + LP + + +Y+ + + + +++ + +E RR FI A L+
Sbjct: 219 KTLE-KAFDGHPALNLPHFSADKLLIDYVAEVIKCIRDKINLIIQGLEKRRAFIAALLSH 277
Query: 275 LFGRPIETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIK 334
F +E DSV ++F + F + L FP ++P + +S+Y +
Sbjct: 278 QFRSVVEYDSVNCTFTIFLHSEQDFYIVWRIDLLPGFPNEKPIVTF-TSVYHMQVPHTVY 336
Query: 335 SPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKKYC 371
+ ++P++PRWE S M + F+ S F+ C
Sbjct: 337 TENYQNFPYNPRWELSFMVTKLLNFIQHASKKFRSNC 373
>gi|26341446|dbj|BAC34385.1| unnamed protein product [Mus musculus]
Length = 333
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 120/249 (48%), Gaps = 39/249 (15%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCGRLRE--SSRLMFEYQTLLEEPQYGENMEIYAG 160
Query: 159 VEKPEEVKFA------VPLMDMNINKMVVGCPWRHP-QKISLQVIYPVNRKYVSAPSAPH 211
+ +F+ +P+ NI ++ P + ++L + + + +
Sbjct: 161 KKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQV----Y 216
Query: 212 LKLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIE 270
KL +P ++ +L + +P + G C+ +Y+P + L +V +
Sbjct: 217 PKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVKS------------K 264
Query: 271 ALAPLFGRP 279
+L P++G P
Sbjct: 265 SLTPVYGEP 273
>gi|198415653|ref|XP_002125294.1| PREDICTED: similar to brain and reproductive organ-expressed
(TNFRSF1A modulator) [Ciona intestinalis]
Length = 383
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 150/356 (42%), Gaps = 39/356 (10%)
Query: 33 GSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGD 92
GS + D FT+ +P+ + I+W I++ PDI+ P + +
Sbjct: 44 GSTDTPQNDIFTIAVPFGGEVIRWQFIFDGTNQKISPDILL--------PSTGFDDFDPE 95
Query: 93 SRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSRE--- 149
IK SL W+N++ LL + E + +QR+ +D + + ++
Sbjct: 96 FDDIK-SLLHWDNENKDSLLLAVQETVHLFKEHQRQVCYGIDKNLSSELSELLSDKDYAS 154
Query: 150 -GIEMHMSSGVEKPEEVKFAV-------PLMDMNINKMVVGCPWRHPQKISLQVIYPVNR 201
+ + + + P+ + V PL++M ++ H + ++ V +
Sbjct: 155 AEVYLKRAPKTKAPKSLNVLVKIPVDLKPLLEMFSKEISERDSIIHSPLLLVKFDLEV-K 213
Query: 202 KYVSAPSAP-HLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVS 260
K V P P H + K + S D + +PP+ + +Y+ +EE L V V+
Sbjct: 214 KAVPMPFLPSHFE-------KIIGSKDQLNIPPYTMSTTIHQYVKKVEEKLTEVVQTVVT 266
Query: 261 LIEVRRRFIEALAPLFGRPIETDSVFYRKSMFFVASGAFSFLVLFFL-----STQFPKQQ 315
R ++ A F R D + Y F S FS+ +FL S FP+
Sbjct: 267 SQSKRCEYVAA----FLRQFPADVLEYDAQNFSSISLVFSYQTFYFLVHISLSKFFPQNL 322
Query: 316 PSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKKYC 371
PS+ LQS+ + Q K T+YP+SPRW ++MA+RT F++++ FK C
Sbjct: 323 PSVTLQSAYHLTKQDELFKK-TFTNYPYSPRWSGTEMAKRTKNFILEKIPLFKDSC 377
>gi|431911940|gb|ELK14084.1| Kanadaptin [Pteropus alecto]
Length = 963
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 13/106 (12%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 763 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 811
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 146
A+WN +P LL ++ EL QY +Q R+ E RL FE T+L
Sbjct: 812 ASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLL 855
>gi|413938774|gb|AFW73325.1| hypothetical protein ZEAMMB73_582962 [Zea mays]
Length = 425
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 118 LRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLM--DMN 175
L + Y+ YQ++RV VDD L FE+ T+LS+EGIE+ M ++P++ F VPL+ D +
Sbjct: 10 LSELYIEYQKERVHMVDDAILAFELSTVLSKEGIEVCMVPSADRPDDATFVVPLLESDFD 69
Query: 176 INKMVVGCPWRHPQKISLQ 194
K+V GCPWR PQKI LQ
Sbjct: 70 FAKLVPGCPWRLPQKIHLQ 88
>gi|395530122|ref|XP_003767147.1| PREDICTED: BRCA1-A complex subunit BRE [Sarcophilus harrisii]
Length = 223
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 13/117 (11%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
+ DRF L IPY +T+KWD+I+NA +P PPD IFG ED +F P D ++ N
Sbjct: 52 SCDRFKLHIPYAGETLKWDIIFNAHYPELPPDFIFG-EDAEFLP---------DPSALHN 101
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHM 155
LA+W+ +P LL ++ EL QY +Q R+ E RL FE T+L HM
Sbjct: 102 -LASWDPANPDCLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGEHM 155
>gi|332210923|ref|XP_003254563.1| PREDICTED: BRCA1-A complex subunit BRE-like [Nomascus leucogenys]
Length = 330
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 13/108 (12%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D +++N
Sbjct: 52 NCDRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALQN 101
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTML 146
LA+WN +P LL ++ EL QY +Q + E RL FE T+L
Sbjct: 102 -LASWNPSNPECLLLVVKELVQQYHQFQCSCLWE--SSRLMFEYQTLL 146
>gi|414871622|tpg|DAA50179.1| TPA: hypothetical protein ZEAMMB73_086352 [Zea mays]
Length = 902
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 119 RDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLM--DMNI 176
R+ Y+ YQ++RV VDD L FE+ +LS+EGI + M ++P++ F VPL+ D +
Sbjct: 268 RELYIEYQKERVHMVDDAILAFELSIVLSKEGIGVCMVPSADRPDDATFVVPLLESDFDF 327
Query: 177 NKMVVGCPWRHPQKISLQ 194
K+V GCPWR PQKI LQ
Sbjct: 328 AKLVPGCPWRLPQKIHLQ 345
>gi|301755914|ref|XP_002913847.1| PREDICTED: BRCA1-A complex subunit BRE-like, partial [Ailuropoda
melanoleuca]
Length = 190
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 15/120 (12%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-L 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMSSG 158
A+WN +P LL ++ EL QY +Q + E L FE T+L + G M + +G
Sbjct: 103 ASWNPSNPECLLLVVKELVQQYHQFQCSCLRE--SSHLMFEYQTLLEEPQYGENMEIYAG 160
>gi|387915708|gb|AFK11463.1| BRCA1-A complex subunit BRE [Callorhinchus milii]
Length = 325
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 15/113 (13%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+N +P PPD IFG ED DF P + + L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNCHYPDLPPDFIFG-EDVDFLP----------EPTTLHHL 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEM 153
WN+++P LL +I EL QY YQ R+ E RL FE + +EG E
Sbjct: 103 NAWNSQNPDCLLLVIKELVQQYYRYQCDRLHE--SSRLMFEYTAL--QEGPEF 151
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 280 IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLT 339
+E D+ + K + F FLV L FP+ QP+L QS +F S G + +
Sbjct: 230 VEYDAEGFTKLTLLLMWKDFCFLV-HNLPLYFPRDQPTLTFQSVYHFTSSGQ-LYQQIQK 287
Query: 340 DYPWSPRWEHSQMAERT 356
YP+SPRW+ ++MA+R
Sbjct: 288 SYPYSPRWDGNEMAKRA 304
>gi|281344935|gb|EFB20519.1| hypothetical protein PANDA_001633 [Ailuropoda melanoleuca]
Length = 165
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 39 TLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN 98
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P D ++ N
Sbjct: 52 NCDRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN 101
Query: 99 SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS--REGIEMHMS 156
LA+WN +P LL ++ EL QY +Q + E L FE T+L + G M +
Sbjct: 102 -LASWNPSNPECLLLVVKELVQQYHQFQCSCLRE--SSHLMFEYQTLLEEPQYGENMEIY 158
Query: 157 SG 158
+G
Sbjct: 159 AG 160
>gi|340712936|ref|XP_003395008.1| PREDICTED: BRCA1-A complex subunit BRE-like [Bombus terrestris]
Length = 380
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 153/346 (44%), Gaps = 28/346 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN-S 99
DRF L IPY + W+V+++++ P PD IF D F + + DS S K S
Sbjct: 51 DRFKLSIPYAKQNLTWNVLFDSQCPEMGPDFIFN--DNTFL-----ADMDVDSLSAKVPS 103
Query: 100 LATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSR-----EGIEMH 154
LA WN D LL ++ EL Y +Q + + + RL+ E +++ E +E+
Sbjct: 104 LAKWNPNDENALLNVLRELLSCYKQHQVQLIQK--QARLQLEYNMLMNSGEVKTEDVEVI 161
Query: 155 MSSGVEKPEEVKFAVPLMDMNINKM-VVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLK 213
+ KP E +F + L ++++++ + C + L +V+ P L
Sbjct: 162 LLPFTSKPTEARFLISL-SVDVSQLEIRTCKSESDIAMLLVTFSGTGWSHVT----PQL- 215
Query: 214 LMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALA 273
S +SL ++ LP + + + Y+P +++ + +V+ V ++ RR +I A +
Sbjct: 216 YFSKSLEESLSETGELHLPHFPYDIYLLRYIPKVKKYIAGKVNSVVQSLKRRRDYIAACS 275
Query: 274 PLFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYF---NSQ 329
+ + +E D++ + F V F V FP++ P + L+S + +
Sbjct: 276 FIHHKCLLEYDAINCKYVTFLVCVDDFYACVHIQFPFGFPQEPPLVELRSIYHLIQRTTY 335
Query: 330 GMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKKYCNEAQ 375
IK P D WSP+ ++ + + +L N K C+ Q
Sbjct: 336 SERIKYPY--DVSWSPQLMVKRLCQTIYSYLQTFKFNSIKNCSGNQ 379
>gi|350409170|ref|XP_003488637.1| PREDICTED: BRCA1-A complex subunit BRE-like [Bombus impatiens]
Length = 380
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 156/346 (45%), Gaps = 28/346 (8%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN-S 99
DRF L IPY + W+V+++++ P PD +F D F + + D+ S K S
Sbjct: 51 DRFKLSIPYAKQNLTWNVLFDSQCPEMGPDFVFN--DNTFL-----ADMDVDALSAKVPS 103
Query: 100 LATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSR-----EGIEMH 154
LA WN D LL ++ EL Y +Q + + + RL+ E +++ E +E+
Sbjct: 104 LAKWNPNDENALLNVLRELLSCYKQHQVQLLQK--QARLQLEYNMLMNSGEVKTEDVEVI 161
Query: 155 MSSGVEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKL 214
+ KP E +F + L ++++++ + + I++ ++ + + P L
Sbjct: 162 LLPSSSKPTEARFLISL-SVDVSQLEIR-TCKSESDIAMLLVTFSGTDW--SRITPQL-Y 216
Query: 215 MSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAP 274
S +SL ++ LP + + Y+P +++ + +V+ V ++ RR +I A +
Sbjct: 217 FSKSLEESLSGTGELHLPHFPSDTYLLRYIPKVKKYIAGKVNSVVQSLKRRRDYIAACSF 276
Query: 275 LFGRP-IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP- 332
+ + +E DS+ + F V F V FP Q+P L+ S+Y +Q
Sbjct: 277 IHHKCLLEYDSINCKYVTFLVCVDDFFACVHIRFPFGFP-QEPPLVELRSIYHLTQRTAY 335
Query: 333 ---IKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKKYCNEAQ 375
+K P D WSP++ ++ + + +L N K C+ Q
Sbjct: 336 SERLKYPY--DVSWSPKFMVERLCQTIYSYLQTFKFNSIKNCSGNQ 379
>gi|241850880|ref|XP_002415732.1| protein BRE, putative [Ixodes scapularis]
gi|215509946|gb|EEC19399.1| protein BRE, putative [Ixodes scapularis]
Length = 371
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 158/387 (40%), Gaps = 45/387 (11%)
Query: 3 YDGFPP----FISAQLHYLINHF--AHPVRVEQAWSGSKYSNT---LDRFTLLIPYCLDT 53
Y F P ++ A L Y + + H VRV A G T DRF LL+PY +
Sbjct: 2 YSSFAPHVRNYLQALLEYAVQNLKTTHAVRVISAGEGGPRDGTRQFCDRFKLLLPYAGQS 61
Query: 54 IKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLA 113
+ W+VI+ A P PPD IF +D F P + G D + + +
Sbjct: 62 VTWEVIFQAHRPEFPPDFIF--DDMSFLPKIEDIPGLWDWDADDDGAL----------VK 109
Query: 114 LIWELRDQYMSYQRKRVGEVDDD--RLKFEICTMLSRE-----GIEMHMSSGVEKPEEVK 166
+++E+ D+Y RK + DD RL+FE +++ + I++H++ V+
Sbjct: 110 VVFEMLDEY----RKHQASLLDDFPRLQFEYSSLVHQSDIPETNIQVHLNRK-NPGSAVR 164
Query: 167 FAVPL-MDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPAL-KSLF 224
F + L +D + V LQV + P +L +P + + L
Sbjct: 165 FWITLPVDFSRLPPVFTKENLSEDTAILQVTFQTPEGSRILP-----QLFLSPRVEEGLG 219
Query: 225 SVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDS 284
+K+P + C+ +Y+P + +S LI +
Sbjct: 220 GTMSLKIPAFSKDGCLMDYVPLIYLLSFFSMSNYNLLIVAILLLCSTFSHFHSLQKAVKK 279
Query: 285 VFYRKSMFFVASG---AFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDY 341
S+ V+ A LV + FP +PSL QS+ Y S G P + TDY
Sbjct: 280 DLALPSLAAVSGARDLALPLLVAVSIPRSFPHDKPSLTFQSA-YHASGGWPY-TITCTDY 337
Query: 342 PWSPRWEHSQMAERTFEFLVDESVNFK 368
P+SPRW+ +MA+R F+ + NF+
Sbjct: 338 PYSPRWDPGEMADRARIFVTEYVPNFQ 364
>gi|414878190|tpg|DAA55321.1| TPA: putative cytochrome P450 superfamily protein [Zea mays]
Length = 231
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 14/89 (15%)
Query: 118 LRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLM--DMN 175
L + Y+ YQ++RV VDD RL FE+ T+LS+E P++ KFA+PLM D +
Sbjct: 11 LSELYIEYQKERVHMVDDARLAFELSTVLSKE------------PDDAKFAIPLMESDFD 58
Query: 176 INKMVVGCPWRHPQKISLQVIYPVNRKYV 204
K+V GCPWR PQKI LQ + +V
Sbjct: 59 FTKLVPGCPWRLPQKIHLQDKQCAGKDFV 87
>gi|726036|gb|AAA64186.1| Hin-3 [Homo sapiens]
Length = 277
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 213 KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEA 271
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I A
Sbjct: 80 KLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAA 139
Query: 272 LAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQG 330
FG + E D+ + K + F FLV L FP+ QP+L QS +F + G
Sbjct: 140 FLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSG 199
Query: 331 MPIKSPLLTDYPWSPRWEHSQMAERT 356
+ S +YP+SPRW+ ++MAER
Sbjct: 200 Q-LYSQAQKNYPYSPRWDGNEMAERA 224
>gi|47214242|emb|CAG12461.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 15/120 (12%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF L IPY +T+KWD+I+NA +P PPD IFG ED DF P +E L
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNARYPELPPDFIFG-EDADFLPEPSELP----------HL 102
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSRE--GIEMHMSSG 158
W+ + LL L+ EL QY +YQ +R+ E RL FE ++L G M + +G
Sbjct: 103 VQWDAGNSECLLQLVKELIQQYHNYQCERLRE--SSRLLFEYDSLLEDPDYGRNMEIYAG 160
>gi|41281945|ref|NP_851799.1| BRCA1-A complex subunit BRE isoform II [Mus musculus]
gi|22128542|gb|AAM92775.1| brain and reproductive organ-expressed isoform II [Mus musculus]
gi|22128544|gb|AAM92776.1| brain and reproductive organ-expressed isoform II3+ [Mus musculus]
Length = 245
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 213 KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEA 271
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I A
Sbjct: 80 KLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAA 139
Query: 272 LAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQG 330
FG + E D+ + K + F FLV L FP+ QP+L QS +F + G
Sbjct: 140 FLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSG 199
Query: 331 MPIKSPLLTDYPWSPRWEHSQMAERT 356
+ S +YP+SPRW+ ++MA+R
Sbjct: 200 Q-LYSQAQKNYPYSPRWDGNEMAKRA 224
>gi|72679888|gb|AAI00566.1| Bre protein, partial [Mus musculus]
Length = 252
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 213 KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEA 271
KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I A
Sbjct: 87 KLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAA 146
Query: 272 LAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQG 330
FG + E D+ + K + F FLV L FP+ QP+L QS +F + G
Sbjct: 147 FLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSG 206
Query: 331 MPIKSPLLTDYPWSPRWEHSQMAERT 356
+ S +YP+SPRW+ ++MA+R
Sbjct: 207 Q-LYSQAQKNYPYSPRWDGNEMAKRA 231
>gi|431911941|gb|ELK14085.1| BRCA1-A complex subunit BRE [Pteropus alecto]
Length = 239
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 221 KSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPI 280
++L + +P + G C+ +Y+P + L +V + RR +I A FG +
Sbjct: 103 RALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGV 162
Query: 281 -ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLT 339
E D+ + K + F FLV L FP+ QP+L QS +F + G + S
Sbjct: 163 VEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQ-LYSQAQK 221
Query: 340 DYPWSPRWEHSQMAERT 356
+YP+SPRW+ ++MA+R
Sbjct: 222 NYPYSPRWDGNEMAKRA 238
>gi|380011034|ref|XP_003689618.1| PREDICTED: LOW QUALITY PROTEIN: BRCA1-A complex subunit BRE-like
[Apis florea]
Length = 382
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 153/337 (45%), Gaps = 26/337 (7%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN-S 99
DRF L IPY + W+V ++++ P PD IF D F + + D+ S K S
Sbjct: 51 DRFKLSIPYAKQNLVWNVFFDSQCPEMGPDFIFN--DNTFL-----ADIDVDALSAKVPS 103
Query: 100 LATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS-----REGIEMH 154
LA WN D LL ++ EL Y +Q + + + RL+ E +++ +E IEM
Sbjct: 104 LAKWNPNDENALLNVLKELLLCYKEHQIQLIQK--QARLQIEYNMLVTSQEIRQEDIEMI 161
Query: 155 MSSGVEKPEEVKFAVPLMDMNINKMVV-GCPWRHPQKISLQVIYPVNRKYVSAPSAPHLK 213
+ KP E +F + L ++++++ + C + + L + +++ +
Sbjct: 162 LLPFSSKPTEARFLISL-SVDLSQLQIRTCKSENDVAVLLVTFSGTDWNRITS------Q 214
Query: 214 LMSTPALKSLFS-VDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEAL 272
L + +L+ + S + ++ +P + + Y+ +++ +++V+ + +E RR +I A
Sbjct: 215 LQFSKSLEGILSEIVELYVPYFPSDTHLIHYILKIKKLXQQKVNSVIQSLEKRREYIAAF 274
Query: 273 APL-FGRPIETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGM 331
L + +E DS+ Y + F ++ L FP++ P++ L S + SQ
Sbjct: 275 LLLKYEAILEFDSIKYTYVSCLLCENDFYAVLYIHLPLGFPREPPTIELCSIYHITSQDT 334
Query: 332 PIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFK 368
+ + +YP+ W M +R F+ FK
Sbjct: 335 VYREK-VKNYPYEFIWTPRVMIKRLLTFIQRNVETFK 370
>gi|328779832|ref|XP_396044.4| PREDICTED: BRCA1-A complex subunit BRE-like [Apis mellifera]
Length = 382
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 152/337 (45%), Gaps = 26/337 (7%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKN-S 99
DRF L IPY + W+V ++++ P PD IF D F + + D+ S+K S
Sbjct: 51 DRFKLSIPYAKQNLVWNVFFDSQCPEMGPDFIFN--DNTFL-----ADIDVDTLSVKVPS 103
Query: 100 LATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLS-----REGIEMH 154
LA WN D LL ++ EL Y +Q + + + RL+ E +++ +E IEM
Sbjct: 104 LANWNPNDENALLNVLKELLLCYKEHQIQLIQK--QARLQIEYNMLVTSQEIRQEDIEMI 161
Query: 155 MSSGVEKPEEVKFAVPLMDMNINKMVV-GCPWRHPQKISLQVIYPVNRKYVSAPSAPHLK 213
+ KP E +F + L ++++++ + C + L + +++ +
Sbjct: 162 LLPFSSKPTEARFLISL-SVDLSQLQIRTCKSESDVAVLLVTFSGTDWNRITS------Q 214
Query: 214 LMSTPALKSLFS-VDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEAL 272
L + +L+ + + + ++ +P + + Y+ +++ + +V+ + +E RR +I A
Sbjct: 215 LQFSKSLEGILNEIVELYIPYFPSDTHLIHYILKIKKFIAAKVNSVIQSLEKRREYIAAF 274
Query: 273 APL-FGRPIETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGM 331
L + +E DS+ Y + F ++ L FP++ P++ L S + SQ
Sbjct: 275 LLLKYEAILEFDSIKYTYISCLLCENDFYAVLYIHLPLGFPREPPTIELCSIYHITSQDT 334
Query: 332 PIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFK 368
+ + +YP+ W M +R F+ FK
Sbjct: 335 VYREK-VKNYPYEFTWTPHVMIKRLLTFIQRNVETFK 370
>gi|357625860|gb|EHJ76150.1| BRCA1-A complex subunit BRE [Danaus plexippus]
Length = 367
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 145/322 (45%), Gaps = 23/322 (7%)
Query: 26 RVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYN 85
+V+ G S +F L++PYC +KWDVI++ P PD F +D+ F N
Sbjct: 35 KVDLERIGGNSSGAESQFRLVLPYCSKKLKWDVIFDTSTPWFAPDFRF--DDDSFLSSAN 92
Query: 86 ESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTM 145
E + ++S+ SL W+ +P L ++ EL Y +Q +++ E + R FE +
Sbjct: 93 E---DYLTKSVP-SLTNWDANNPKSLGDVLSELIKLYKIHQVRKLHEDANSRASFEYSAL 148
Query: 146 LSREGIEMHMSSGVEKPEEVKFAVPLMD--MNINKMVVGCPWRHPQKISLQVIYPVNRKY 203
M + EK EV +++ + + V+ P +
Sbjct: 149 -------MGNALTTEKDVEVWVGGHIVEFLIKLKVDVLRLPELYNDGTEQNPGIDTALLL 201
Query: 204 VSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIE 263
V P++ + +L+ +P L + + LP + +Y+P + E L ++ ++ +
Sbjct: 202 VRYPNSTNAELILSPFLTKVLG--KITLPMMHHSGVLMDYVPLVTEILNNKIYHLLNNDK 259
Query: 264 VRRRFIEALAPLF-GRPIETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQS 322
++R + L + G +E D+ + + F +++ + +FP++ P L L+
Sbjct: 260 LKRDLLAQLIVKYEGAILEHDA---SSAALLLQMNDFYWILQVDIGIKFPEKPPVLTLR- 315
Query: 323 SMYFNSQGMPIKSPLLTDYPWS 344
S+Y++S+G P K +L + P++
Sbjct: 316 SVYYSSKGKP-KFKVLPNCPYT 336
>gi|320169788|gb|EFW46687.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 508
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 6 FPPFISAQL-----HYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIY 60
FPP I QL H INH A P R+E A S DR +L+PYC T++W++++
Sbjct: 14 FPPLIHKQLETLGLHTPINHLA-PFRLESALSSGAVPGVNDRIQVLVPYCNQTLRWEILF 72
Query: 61 NAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWEL 118
NA P APPD +F + F P + I N L WN +P L ++ EL
Sbjct: 73 NALDPAAPPDFVFMGAPQ-FAPSLQQ---------IPN-LLNWNINEPQALFLVLCEL 119
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Query: 228 DVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFY 287
+ +LP + ++L + A+ + V + R ++ A + I SV
Sbjct: 355 NAQLPRYTLPTLADDFLGAMHSAVSAHIETYVERVNRRSAYVSAFWTEYRSSILEFSVAD 414
Query: 288 RKSM--FFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSP 345
SM F +A + L +S +FP++ P L L + +F++ P + DYP+SP
Sbjct: 415 GASMISFHLALKNHYAVALLEISPRFPQEAPVLTL-TCAFFDNGDQPFRK-QFRDYPYSP 472
Query: 346 RWEHSQMAERTFEFLVDESVNFKKYCNEA 374
RW +MA+R +L E F + A
Sbjct: 473 RWSPEEMAQRMRVYLDTELPRFLEEAKSA 501
>gi|291230498|ref|XP_002735195.1| PREDICTED: BRCA1-A complex subunit BRE-like [Saccoglossus
kowalevskii]
Length = 324
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 25 VRVEQAWSGSKYS-----NTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDED 79
+R+ SGS S DRF + IP+ + +KW VI+N+ +P PPD IF ED+
Sbjct: 33 LRISNLKSGSHISIRRPTTCCDRFKVSIPFAGNDVKWQVIFNSCYPSLPPDFIFDKEDKG 92
Query: 80 FHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLK 139
F P NE SL W++ + LL ++ EL Y YQ + + RL
Sbjct: 93 FCPGINEV----------KSLVNWDHTNNKSLLFVMRELVQHYKEYQEALLQQ--HPRLH 140
Query: 140 FEICTM 145
+E T+
Sbjct: 141 YEYTTL 146
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 280 IETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLT 339
+E DS + K F F++ L FP++QP + S + ++ G P +
Sbjct: 227 LEYDSSAFLKISILQEWNDFYFVLHVDLPQSFPQKQPVMTFTSVYHLSAYGKPYHC-IQK 285
Query: 340 DYPWSPRWEHSQMAERTFEFLVDESVNFKK 369
YP+SPRW ++MAER F++ F++
Sbjct: 286 SYPYSPRWTGNEMAERARAFMLSFLPEFRR 315
>gi|260836663|ref|XP_002613325.1| hypothetical protein BRAFLDRAFT_118725 [Branchiostoma floridae]
gi|229298710|gb|EEN69334.1| hypothetical protein BRAFLDRAFT_118725 [Branchiostoma floridae]
Length = 299
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 229 VKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSVFY 287
+++P + G C+ +Y+P +++ L++Q+ V + RR ++ A FG + E D+ +
Sbjct: 170 LRIPRFPTGGCLMDYVPQVQDFLQKQIDHIVEGYQRRREYVAAFISRFGGSVLEYDAESF 229
Query: 288 RKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFN-SQGMPIKSPLLTDYPWSPR 346
K + F F++ L ++FP+ P QS + + + G P S + YP+SPR
Sbjct: 230 TKLSLVLEWNEFFFVLHIELPSRFPQDMPVFTFQSCYHLSKTNGEPYIS-VQKSYPYSPR 288
Query: 347 WEHSQMAERT 356
W +MA R
Sbjct: 289 WTGEEMAHRA 298
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHP 82
DRF + IP+ D++KW+VI+++ P PPD IF E+ +F P
Sbjct: 56 DRFKIYIPFAGDSLKWEVIFDSCQPSNPPDFIFLGENGNFDP 97
>gi|414873154|tpg|DAA51711.1| TPA: hypothetical protein ZEAMMB73_994626 [Zea mays]
Length = 427
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
Query: 122 YMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHMSSGVEKPEEVKFAVPLM----DMNIN 177
Y+ YQ++RV VDD RL FE+ T+LS+EGIE+ M ++P++ KFAVPL+ D I
Sbjct: 352 YIEYQKERVHMVDDARLAFELSTVLSKEGIEVCMVPSADRPDDAKFAVPLLESDFDFAIA 411
Query: 178 KMVV 181
K+ +
Sbjct: 412 KLTI 415
>gi|290984609|ref|XP_002675019.1| predicted protein [Naegleria gruberi]
gi|284088613|gb|EFC42275.1| predicted protein [Naegleria gruberi]
Length = 448
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 142/356 (39%), Gaps = 45/356 (12%)
Query: 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLIP-YCLD--TIKWDVIYNAEFPH 66
I L ++ N + + + ++ DRF L IP +C+ ++ + Y+ PH
Sbjct: 43 IKEHLLFMNNSTPYKINISNMGKSNRKQLNFDRFQLEIPVFCIGECSLSIHLFYDGSRPH 102
Query: 67 APPD--IIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNN--------KDPTRLLAL-- 114
+P D II F +S S S+ W + D ++ L
Sbjct: 103 SPFDFQIISDLSSSYLQNFMIDS-------SKLQSMIEWRDLYIRYLQHHDVSKELCTFT 155
Query: 115 ---IWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGI-----EMHMSSGVE-KPEEV 165
I E+ + Y + + + +D ++FE T S G E++ + G E E++
Sbjct: 156 FRTISEIIEFLTEYYKLVISKHKNDNIRFEFDTTQSIGGANFYIKELYSNDGTECSTEKI 215
Query: 166 KFAVPLMDMNINKM----------VVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLM 215
F VPL + K+ + P P K+ + Y +R + + +
Sbjct: 216 YFLVPLSISGLEKIEEYQRLFDVNTIQLPDSKP-KLLVVYSYDKSRDVIVNVNTEIIYPT 274
Query: 216 STPALKSLFSVDDVKLPPWLDGM-CMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAP 274
S K L + + +P W G C+ EY+ E +E +V + ++ R FI+ L
Sbjct: 275 SVKNSKRLQWLTQIPIPSWNQGKSCIIEYMLEAVENIESEVEKYTQKLKARLEFIKQLLA 334
Query: 275 LFGRPIE-TDSVFYRKSMFFVASGAFSFLVLFFLSTQ-FPKQQPSLMLQSSMYFNS 328
FG P + +++ K F + F F + L + FP QP + +QS+ YF S
Sbjct: 335 AFGNPTDFSENESLTKISFLMERDKFQFFLHITLEREGFPIVQPVIRMQSTQYFKS 390
>gi|428185249|gb|EKX54102.1| hypothetical protein GUITHDRAFT_100349 [Guillardia theta CCMP2712]
Length = 336
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 145/344 (42%), Gaps = 57/344 (16%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL 100
DRF + I T +W ++ NA P PPD+IF ED N EG IKN
Sbjct: 30 DRFAVSINLGSTTHEWTLLMNALRPEVPPDVIFPDGYED---MINYEVLEG----IKN-- 80
Query: 101 ATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTM--LSREGIEMHMSSG 158
W+ K + L+ L+ E+R+ + +R E +D+++FE+ ++ LS E ++
Sbjct: 81 --WDPKKSSSLVDLLVEVREILRQSEFQRSFEFSEDKVRFELESVKALSPESEIRILNDD 138
Query: 159 VEKPEEVKFAVPLMDMNINKMVVGCPWRHPQKISLQVIYPVNRKYVSAPSAPHLKLMSTP 218
+ E +P+ + + ++ + +S ++ YP K
Sbjct: 139 LRTIEWFILVLPVALIRLCLILD----QELANVSTRLDYPSTTK---------------- 178
Query: 219 ALKSLFSVDDVKLPPWLDGMCMA-EYLPHLEEALER----QVSEAVSLIEVRRRFIEALA 273
+ L + P W G A +++P ++ ++R Q + A+ L+++ +
Sbjct: 179 --EELHAF----CPAWEPGKTHAFDFVPLVQGLVQRKLLIQRARAILLVQLCEKL----- 227
Query: 274 PLFGRPIETDSVFYRKSMFFV-ASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP 332
P+ DS ++ K+ F F + LS FP + P++++QS + + P
Sbjct: 228 ----NPLSVDSAYHEKASFLCQIDNNFDAIAHLTLSNNFPDEPPTIIMQSVVQLIDRR-P 282
Query: 333 IKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFK-KYCNEAQ 375
I ++ +Y W P W M + + E + FK K +AQ
Sbjct: 283 IID-VVIEYQWDPLWSIPVMVNHLIKVIRTELLEFKNKVLQQAQ 325
>gi|350582606|ref|XP_003354932.2| PREDICTED: hypothetical protein LOC100623966 [Sus scrofa]
Length = 342
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 57 DVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIW 116
D+I+NA++P PPD IFG ED +F P D ++ N LA+WN +P LL ++
Sbjct: 211 DIIFNAQYPELPPDFIFG-EDAEFLP---------DPSALHN-LASWNPSNPECLLLVVK 259
Query: 117 ELRDQYMSYQRKRVGEVDDDRLKFEICTML 146
EL QY +Q R+ E RL FE T+L
Sbjct: 260 ELVQQYHQFQCSRLRE--SSRLMFEYQTLL 287
>gi|326429967|gb|EGD75537.1| hypothetical protein PTSG_06607 [Salpingoeca sp. ATCC 50818]
Length = 195
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 299 FSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFE 358
F L+ +S++FP+QQP+L+LQS + ++ G PI++ ++YP+SPRW +++A R
Sbjct: 119 FHVLLHVRISSRFPEQQPTLILQSVYHDDAAGHPIRTQY-SEYPYSPRWHGTELATRIRT 177
Query: 359 FLVDESVNFKK 369
FL++E FK+
Sbjct: 178 FLLEEVPRFKQ 188
>gi|62988769|gb|AAY24156.1| unknown [Homo sapiens]
Length = 100
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHP 82
DRF L IPY +T+KWD+I+NA++P PPD IFG ED +F P
Sbjct: 54 DRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFG-EDAEFLP 94
>gi|47214243|emb|CAG12462.1| unnamed protein product [Tetraodon nigroviridis]
Length = 264
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 265 RRRFIEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSS 323
RR +I A FG + E D+ + K + F FLV L FP+ QP+L QS
Sbjct: 152 RREYIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSV 211
Query: 324 MYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
+F + G + S + YP+SPRW+ ++MA+R
Sbjct: 212 YHFTNSGQ-LYSQVQKSYPYSPRWDGNEMAKRA 243
>gi|302852648|ref|XP_002957843.1| hypothetical protein VOLCADRAFT_98999 [Volvox carteri f.
nagariensis]
gi|300256822|gb|EFJ41080.1| hypothetical protein VOLCADRAFT_98999 [Volvox carteri f.
nagariensis]
Length = 265
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 229 VKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLFGRPIETDSVFYR 288
++LP W MC+AEY+P E L+ Q+ S++ VR + + L + ++
Sbjct: 122 LQLPLWSPHMCLAEYVPLAVERLQAQLDTHCSVLAVRHQLMTQLG-ELLGGLLELNLRGG 180
Query: 289 KSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWE 348
+++ +A LV L + FP ++P ++LQ S +YPWSPRW
Sbjct: 181 VALYGIAWEGNPVLVSLELGSSFPSEKPLVVLQCVRVLPGAD---SSRSYREYPWSPRWS 237
Query: 349 HSQMAERTFEFLVDE 363
+M+ R +L DE
Sbjct: 238 AGEMSARIHNWLQDE 252
>gi|195996911|ref|XP_002108324.1| hypothetical protein TRIADDRAFT_52680 [Trichoplax adhaerens]
gi|190589100|gb|EDV29122.1| hypothetical protein TRIADDRAFT_52680 [Trichoplax adhaerens]
Length = 290
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 241 AEYLPHLEEALERQVSEAVSLIEVRRRFIEALAPLF-GRPIETDSVFYRKSMFFVASGAF 299
+E LPHL+ ++ E + R+ IE+ F G +E DS Y + + F
Sbjct: 158 SESLPHLKADKINRIGENFTR---RKELIESFKQHFNGALLEYDSENYTSINLLLVTSGF 214
Query: 300 SFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEF 359
F++ L + FP+ P L++QS +Y +P K T YP+SPRW +M ER +
Sbjct: 215 YFILHVSLPSGFPQSMPVLIIQS-VYHRMGILPYKETR-TSYPYSPRWSGKEMVERIQVY 272
Query: 360 LVDESVNFK 368
L +FK
Sbjct: 273 LATIIEDFK 281
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 41 DRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHP 82
DRF L +PY T+ W+VI++ + PD IFG ED+DF+P
Sbjct: 57 DRFKLHLPYSQHTLIWEVIFDRRRNNQAPDFIFGEEDKDFNP 98
>gi|301787761|ref|XP_002929297.1| PREDICTED: BRCA1-A complex subunit BRE-like [Ailuropoda
melanoleuca]
Length = 130
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 252 ERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQ 310
+Q + S + ++++I A FG + E D+ + K + F FLV L
Sbjct: 5 HQQGAVCDSRVPQKKQYIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLF 64
Query: 311 FPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
FP+ QP+L QS +F + G + S +YP+SPRW+ ++MA+R
Sbjct: 65 FPRDQPTLTFQSVYHFTNSGQ-LYSQAQKNYPYSPRWDGNEMAKRA 109
>gi|270014127|gb|EFA10575.1| hypothetical protein TcasGA2_TC012831 [Tribolium castaneum]
Length = 386
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/365 (17%), Positives = 145/365 (39%), Gaps = 51/365 (13%)
Query: 25 VRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPE----DEDF 80
VR Q++ S +T+ +PY + W++I+ P D+ F P+ DE F
Sbjct: 51 VRNNQSYGYS--------YTIKVPYASKRLNWELIF------CPEDLKFAPDFNFNDETF 96
Query: 81 HPFYNESGGEGDSRSIKN--SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRL 138
+ Y+ + I+N SL WN D L+ ++ + Y Q +R+ + +
Sbjct: 97 YLAYDINS------IIENVPSLEQWNVYDAKSLITVLKQFLSLYKKQQLERLSDNIYAHV 150
Query: 139 KFEICTMLSR---EGIEMHM---------SSGVEKPEEVKFAVPLMDMNINKMVVGCPWR 186
E +++ +E+++ S V+ ++ P+M+ + +
Sbjct: 151 NLEYQSLVREVNPHDVEIYLEHTCAHFLISVKVDVSALPEYLQPIMNGQNDDYLNPGDDT 210
Query: 187 HPQKISLQVIYPVNRKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPH 246
K+S + S + L +P + L + P ++ + EY+
Sbjct: 211 CYLKVSFVKL---------DGSRVNTSLQLSPRIDQLINRKTFHFPDFVKHSSLPEYVTT 261
Query: 247 LEEALERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLF 305
+ L+ + + V ++++ F+ L ++ + E DS + K+ + + LV
Sbjct: 262 VTNLLQEHIEQLVIYHKLKKEFMTCLCTMYAESVLEFDSEKFDKAEILLEVDDYHCLVQI 321
Query: 306 FLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESV 365
++ FP+++P++ L + N + DY ++P W +M + + L +
Sbjct: 322 EINQTFPEEKPTVTL---IAINCHPLANTCREKLDYEYNPHWTPEEMLAKLMDSLGENIQ 378
Query: 366 NFKKY 370
F+ +
Sbjct: 379 RFENH 383
>gi|395530184|ref|XP_003767178.1| PREDICTED: ribokinase [Sarcophilus harrisii]
Length = 356
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 311 FPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAER 355
FP+ QP+L QS +F + G + S +YP+SPRW+ ++MA+R
Sbjct: 18 FPRDQPTLTFQSVYHFTNSGQ-LYSQAQKNYPYSPRWDGNEMAKR 61
>gi|328773842|gb|EGF83879.1| hypothetical protein BATDEDRAFT_21437 [Batrachochytrium
dendrobatidis JAM81]
Length = 507
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 100 LATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLKFEICTMLSREGIEMHM---S 156
L W+ +D + LL + E+R Q++ YQ ++ + +RL FEI + E +E+ + S
Sbjct: 85 LVEWDAQDESNLLYVFSEVRQQFIKYQLEQFMSSNVERLVFEIGCIAHVEDLELLVETNS 144
Query: 157 SGVEKPEEVKFAV----PLMDMNIN-----KMVVGCPWRHPQKIS-------LQVIYPVN 200
+ + K V V L D+++N K V+ + +K+S L V Y +N
Sbjct: 145 TSLRKEYHVYVPVCYHETLADLDLNDPPKRKFVIDTLLEY-EKLSILYTGAVLYVKYDMN 203
Query: 201 RKYVSAPSAPHLKLMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVS 260
+ SA + + +S LK++ +KLP + +YL +++ L++ S ++
Sbjct: 204 QDN-SAVNTITREFLS---LKTMKPDTTIKLPSCDKDTLIVDYLAQIQDLLQKTQSIRLN 259
Query: 261 LIEVRRRFIEALAPLFGR-PIETDSVFYRKSMFFVASGAFS-----------FLVLFFLS 308
R R ++ L F +E D V + ++ + A S +V +S
Sbjct: 260 NHAARERLVQCLVTEFAEYVLEYDDVNFSYVGLYINAYATSETKQICEVVAGAVVNVHIS 319
Query: 309 TQFPKQQPSLMLQSSMYFNS 328
+P + ++L S F S
Sbjct: 320 ALYPLEPIVIILSSPTKFQS 339
>gi|189241403|ref|XP_970078.2| PREDICTED: similar to brain and reproductive organ-expressed
(TNFRSF1A modulator) [Tribolium castaneum]
Length = 191
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/158 (17%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Query: 214 LMSTPALKSLFSVDDVKLPPWLDGMCMAEYLPHLEEALERQVSEAVSLIEVRRRFIEALA 273
L +P + L + P ++ + EY+ + L+ + + V ++++ F+ L
Sbjct: 34 LQLSPRIDQLINRKTFHFPDFVKHSSLPEYVTTVTNLLQEHIEQLVIYHKLKKEFMTCLC 93
Query: 274 PLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP 332
++ + E DS + K+ + + LV ++ FP+++P++ L + N +
Sbjct: 94 TMYAESVLEFDSEKFDKAEILLEVDDYHCLVQIEINQTFPEEKPTVTL---IAINCHPLA 150
Query: 333 IKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKKY 370
DY ++P W +M + + L + F+ +
Sbjct: 151 NTCREKLDYEYNPHWTPEEMLAKLMDSLGENIQRFENH 188
>gi|384411754|ref|YP_005621119.1| apolipoprotein N-acyltransferase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|335932128|gb|AEH62668.1| apolipoprotein N-acyltransferase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 583
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 279 PIETDSVFYR----KSMFFVASGAFSFLVLFFLS-TQFPKQQPSLMLQSSMYFNSQGMPI 333
P+E D+ R KS FFV S AF + +F +S +Q P + +L L + + G I
Sbjct: 143 PVENDAAVAREGTMKSRFFVGSAAFWSVPVFSISLSQIPLWRLTLALAGCL---TWGEWI 199
Query: 334 KSPLLTDYPWSP 345
KS + T +PWSP
Sbjct: 200 KSWVFTGFPWSP 211
>gi|349806101|gb|AEQ18523.1| putative brca1-a complex subunit bre isoform ii [Hymenochirus
curtipes]
Length = 134
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 315 QPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAERT 356
QP+L QS +F + G +S +YP+SPRW+ ++MA+R
Sbjct: 75 QPTLTFQSVYHFTNSGQDSQS--QKNYPYSPRWDGNEMAKRA 114
>gi|242014451|ref|XP_002427904.1| class A rhodopsin-like G-protein coupled receptor GPRnna11,
putative [Pediculus humanus corporis]
gi|212512377|gb|EEB15166.1| class A rhodopsin-like G-protein coupled receptor GPRnna11,
putative [Pediculus humanus corporis]
Length = 254
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 23 HPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHP 82
H ++ Q +++ DRF L I YC + W ++ N PD I +E+F
Sbjct: 111 HSIQCGQILEKNEFQYG-DRFQLRILYCKKPLNWQILMNGNDLSKSPDFIL---EENFL- 165
Query: 83 FYNESGGEGDSRSIKN---SLATWNNKDPTRLLALIWELRDQYMSYQRKRVGEVDDDRLK 139
+ +IK+ SL W + LL +I EL Y SYQ K + + RL+
Sbjct: 166 ------AHETADTIKSNVPSLVNWKPNNVNCLLNIIIELLQLYKSYQIKLLKS--NSRLQ 217
Query: 140 ---FEICTMLSREGIE 152
FE T+ S I+
Sbjct: 218 RYLFEYETLSSMSNIQ 233
>gi|322798901|gb|EFZ20412.1| hypothetical protein SINV_15665 [Solenopsis invicta]
Length = 141
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 21 FAHPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIKWDVIYNAEFPHAPPDIIFGPED 77
H ++++ S S D F L IPY + + W+++++++FP PD IF ++
Sbjct: 42 ICHLIKLDSVSSSCDRSKN-DCFKLSIPYAGEHLAWNILFDSQFPEMGPDFIFNDQN 97
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,208,364,032
Number of Sequences: 23463169
Number of extensions: 260184830
Number of successful extensions: 525591
Number of sequences better than 100.0: 145
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 525084
Number of HSP's gapped (non-prelim): 272
length of query: 381
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 237
effective length of database: 8,980,499,031
effective search space: 2128378270347
effective search space used: 2128378270347
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)