Query 016870
Match_columns 381
No_of_seqs 53 out of 55
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 05:09:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016870.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016870hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h2y_A Ubiquitin-conjugating e 96.6 0.017 5.6E-07 49.6 10.4 61 299-361 67-131 (136)
2 2fo3_A Ubiquitin-conjugating e 96.4 0.006 2E-07 51.5 6.8 61 300-362 54-118 (125)
3 2bep_A Ubiquitin-conjugating e 96.1 0.044 1.5E-06 47.9 10.7 62 299-362 58-123 (159)
4 4gpr_A Ubiquitin-conjugating e 96.1 0.047 1.6E-06 47.3 10.7 63 298-362 50-115 (151)
5 1z2u_A Ubiquitin-conjugating e 95.9 0.061 2.1E-06 46.5 10.5 62 299-362 51-115 (150)
6 1jat_A Ubiquitin-conjugating e 95.8 0.053 1.8E-06 47.2 10.0 63 298-362 51-116 (155)
7 2aak_A UBC1, ubiquitin conjuga 95.8 0.015 5E-07 50.5 6.3 61 299-361 51-114 (152)
8 2r0j_A Ubiquitin carrier prote 95.7 0.021 7.2E-07 49.5 7.0 61 299-361 48-111 (149)
9 2ayv_A Ubiquitin-conjugating e 95.7 0.092 3.1E-06 46.5 11.1 62 299-362 68-132 (166)
10 1ayz_A UBC2, ubiquitin-conjuga 95.6 0.018 6.2E-07 51.2 6.2 59 300-360 52-113 (169)
11 1fxt_A Ubiquitin-conjugating e 95.6 0.058 2E-06 46.6 9.2 61 300-362 50-114 (149)
12 1y8x_A Ubiquitin-conjugating e 95.4 0.031 1E-06 49.2 6.9 61 300-362 52-115 (160)
13 2q0v_A Ubiquitin-conjugating e 95.3 0.014 4.8E-07 51.4 4.4 60 300-362 73-138 (156)
14 2e2c_A Ubiquitin conjugating e 95.3 0.11 3.7E-06 45.3 10.0 61 299-361 56-119 (156)
15 2c4o_A Ubiquitin-conjugating e 95.2 0.04 1.4E-06 48.7 7.0 61 300-362 67-130 (165)
16 1yh2_A HSPC150 protein similar 95.2 0.041 1.4E-06 48.7 7.1 61 300-361 52-118 (169)
17 3k9o_A Ubiquitin-conjugating e 95.2 0.11 3.7E-06 47.1 10.0 84 277-362 27-120 (201)
18 1c4z_D UBCH7, ubiquitin conjug 95.1 0.049 1.7E-06 47.3 7.2 62 300-362 50-114 (154)
19 1i7k_A Ubiquitin-conjugating e 95.1 0.041 1.4E-06 49.5 6.8 62 299-362 77-141 (179)
20 1zdn_A Ubiquitin-conjugating e 95.1 0.028 9.5E-07 49.2 5.5 61 300-362 61-124 (158)
21 3fn1_B NEDD8-conjugating enzym 95.0 0.024 8.4E-07 49.9 4.9 63 299-362 61-131 (167)
22 2a7l_A Hypothetical ubiquitin- 94.9 0.065 2.2E-06 46.1 7.4 57 299-357 71-132 (136)
23 2gjd_A Ubiquitin-conjugating e 94.8 0.041 1.4E-06 48.1 5.9 61 300-361 57-121 (157)
24 2nvu_C NEDD8-conjugating enzym 94.8 0.051 1.8E-06 48.8 6.7 60 300-361 72-134 (180)
25 2ucz_A UBC7, ubiquitin conjuga 94.8 0.059 2E-06 47.3 7.0 61 300-361 53-128 (165)
26 1tte_A Ubiquitin-conjugating e 94.7 0.036 1.2E-06 51.4 5.5 60 300-361 51-114 (215)
27 3h8k_A Ubiquitin-conjugating e 94.7 0.072 2.5E-06 46.6 7.2 62 299-361 51-127 (164)
28 3bzh_A Ubiquitin-conjugating e 94.7 0.2 6.9E-06 45.5 10.4 63 298-362 94-159 (194)
29 2c2v_B Ubiquitin-conjugating e 94.7 0.027 9.3E-07 49.1 4.4 59 300-360 53-114 (154)
30 1wzv_A Ubiquitin-conjugating e 94.6 0.079 2.7E-06 46.0 7.1 62 300-362 52-116 (155)
31 2grr_A Ubiquitin-conjugating e 94.5 0.08 2.7E-06 46.4 7.0 61 300-361 60-124 (161)
32 3rz3_A Ubiquitin-conjugating e 94.5 0.28 9.7E-06 43.9 10.7 63 299-362 55-132 (183)
33 2f4w_A Ubiquitin-conjugating e 94.5 0.23 8E-06 44.8 10.2 63 298-362 60-126 (187)
34 1jat_B Ubiquitin-conjugating e 94.2 0.061 2.1E-06 46.0 5.4 61 299-362 57-123 (138)
35 2f4z_A Tgtwinscan_2721 - E2 do 94.2 0.092 3.2E-06 47.8 6.9 60 300-361 93-156 (193)
36 3o2u_A NEDD8-conjugating enzym 94.1 0.092 3.1E-06 47.5 6.7 61 300-362 81-144 (190)
37 3rcz_B SUMO-conjugating enzyme 93.9 0.1 3.5E-06 46.1 6.5 62 299-361 62-127 (163)
38 3e46_A Ubiquitin-conjugating e 93.8 0.4 1.4E-05 45.4 10.8 84 277-362 79-172 (253)
39 2y9m_A Ubiquitin-conjugating e 93.8 0.11 3.9E-06 46.0 6.6 63 299-362 65-132 (172)
40 2awf_A Ubiquitin-conjugating e 93.4 0.14 4.7E-06 45.6 6.4 62 300-362 66-142 (172)
41 2a4d_A Ubiquitin-conjugating e 93.3 0.11 3.6E-06 46.1 5.5 61 300-361 77-142 (160)
42 2pwq_A Ubiquitin conjugating e 93.2 0.066 2.3E-06 49.6 4.1 61 299-361 70-134 (216)
43 4ds2_A Ubiquitin-conjugating e 93.1 0.13 4.6E-06 45.2 5.8 62 298-361 68-132 (167)
44 2onu_A Ubiquitin-conjugating e 93.1 0.068 2.3E-06 46.6 3.9 54 300-355 47-104 (152)
45 1yf9_A Ubiquitin carrier prote 93.0 0.057 2E-06 48.1 3.4 55 300-356 56-114 (171)
46 3ceg_A Baculoviral IAP repeat- 92.7 0.11 3.7E-06 51.2 5.0 61 299-360 127-202 (323)
47 4ddg_A Ubiquitin-conjugating e 92.4 0.21 7.3E-06 49.8 6.9 62 299-362 50-114 (399)
48 2hlw_A Ubiquitin-conjugating e 92.1 0.17 5.7E-06 45.1 5.2 62 300-362 87-153 (170)
49 1zuo_A Hypothetical protein LO 92.1 0.32 1.1E-05 43.8 7.1 62 300-362 90-155 (186)
50 2z5d_A Ubiquitin-conjugating e 92.1 0.086 3E-06 47.5 3.2 60 300-361 69-133 (179)
51 1yrv_A Ubiquitin-conjugating l 91.4 0.15 5.2E-06 45.3 4.1 62 300-362 71-137 (169)
52 2daw_A RWD domain containing p 91.1 1.4 4.7E-05 38.2 9.7 63 298-367 74-141 (154)
53 2fo3_A Ubiquitin-conjugating e 90.3 4.4 0.00015 33.8 11.9 98 10-122 11-116 (125)
54 1jat_B Ubiquitin-conjugating e 89.8 0.73 2.5E-05 39.2 6.8 78 40-123 39-122 (138)
55 2ebm_A RWD domain-containing p 89.5 4.2 0.00014 33.4 11.0 57 267-323 17-79 (128)
56 3rz3_A Ubiquitin-conjugating e 89.2 3.1 0.00011 37.0 10.8 69 10-85 12-86 (183)
57 2q0v_A Ubiquitin-conjugating e 89.1 0.84 2.9E-05 40.0 6.8 68 48-121 68-135 (156)
58 1fxt_A Ubiquitin-conjugating e 88.6 5.1 0.00017 34.3 11.3 98 10-120 6-110 (149)
59 2yz0_A Serine/threonine-protei 88.6 2 6.7E-05 35.9 8.5 62 264-325 14-88 (138)
60 2a4d_A Ubiquitin-conjugating e 88.2 0.98 3.3E-05 39.9 6.6 75 41-120 59-139 (160)
61 1wzv_A Ubiquitin-conjugating e 88.0 7.1 0.00024 33.6 11.9 97 10-120 9-112 (155)
62 1zdn_A Ubiquitin-conjugating e 87.9 6.7 0.00023 33.9 11.7 95 10-120 18-120 (158)
63 1yrv_A Ubiquitin-conjugating l 87.5 7.2 0.00025 34.4 11.9 96 10-119 28-132 (169)
64 2hlw_A Ubiquitin-conjugating e 87.5 1 3.4E-05 40.1 6.3 69 48-121 82-150 (170)
65 3h8k_A Ubiquitin-conjugating e 87.1 7.6 0.00026 33.6 11.6 69 10-85 8-82 (164)
66 2gjd_A Ubiquitin-conjugating e 86.9 6.7 0.00023 33.9 11.2 102 10-121 9-119 (157)
67 2a7l_A Hypothetical ubiquitin- 86.8 3.7 0.00013 35.0 9.3 98 9-119 26-132 (136)
68 2e2c_A Ubiquitin conjugating e 86.8 9.2 0.00032 32.9 12.0 96 10-120 14-116 (156)
69 2c2v_B Ubiquitin-conjugating e 86.7 9.6 0.00033 32.8 12.0 84 10-106 10-100 (154)
70 2grr_A Ubiquitin-conjugating e 86.5 8 0.00027 33.6 11.4 102 10-121 12-122 (161)
71 2h2y_A Ubiquitin-conjugating e 86.4 12 0.00041 31.6 12.3 96 10-120 25-128 (136)
72 1jat_A Ubiquitin-conjugating e 86.2 6.8 0.00023 33.7 10.8 97 10-121 10-113 (155)
73 3rcz_B SUMO-conjugating enzyme 86.0 8 0.00027 33.8 11.2 101 12-119 17-123 (163)
74 1c4z_D UBCH7, ubiquitin conjug 85.9 3.8 0.00013 35.3 9.0 73 40-122 32-112 (154)
75 2r0j_A Ubiquitin carrier prote 85.4 8.8 0.0003 32.8 11.0 96 10-120 6-108 (149)
76 2ucz_A UBC7, ubiquitin conjuga 85.4 11 0.00037 32.8 11.7 68 11-85 10-83 (165)
77 1yh2_A HSPC150 protein similar 85.3 13 0.00045 32.5 12.4 67 11-85 10-82 (169)
78 2day_A Ring finger protein 25; 85.3 7.8 0.00027 31.7 10.3 60 264-323 12-83 (128)
79 2c4o_A Ubiquitin-conjugating e 85.3 13 0.00045 32.4 12.3 96 10-120 24-126 (165)
80 2bep_A Ubiquitin-conjugating e 84.9 2.7 9.3E-05 36.4 7.6 73 40-120 40-119 (159)
81 4gpr_A Ubiquitin-conjugating e 84.7 16 0.00053 31.3 12.3 94 11-119 10-110 (151)
82 2awf_A Ubiquitin-conjugating e 84.6 13 0.00044 32.7 12.0 103 9-121 21-139 (172)
83 3bzh_A Ubiquitin-conjugating e 84.5 14 0.00047 33.4 12.3 94 11-119 54-154 (194)
84 2pwq_A Ubiquitin conjugating e 84.3 10 0.00036 34.8 11.7 85 10-106 28-119 (216)
85 2ayv_A Ubiquitin-conjugating e 84.2 16 0.00053 32.0 12.3 96 10-120 26-128 (166)
86 3fn1_B NEDD8-conjugating enzym 84.0 9 0.00031 33.3 10.6 69 10-85 19-92 (167)
87 2aak_A UBC1, ubiquitin conjuga 83.6 10 0.00035 32.4 10.6 96 10-120 9-111 (152)
88 1z2u_A Ubiquitin-conjugating e 83.2 13 0.00046 31.6 11.2 96 10-120 9-111 (150)
89 3k9o_A Ubiquitin-conjugating e 81.9 3.9 0.00013 36.8 7.6 71 40-118 37-114 (201)
90 1ukx_A GCN2, GCN2 EIF2alpha ki 81.3 5.2 0.00018 33.1 7.7 62 264-325 14-89 (137)
91 3o2u_A NEDD8-conjugating enzym 80.7 4.1 0.00014 36.6 7.3 53 48-106 76-128 (190)
92 4ds2_A Ubiquitin-conjugating e 79.7 5.1 0.00017 35.0 7.4 74 40-119 49-132 (167)
93 3e46_A Ubiquitin-conjugating e 79.6 4.7 0.00016 38.1 7.6 71 40-118 89-166 (253)
94 2y9m_A Ubiquitin-conjugating e 78.5 4.2 0.00014 35.8 6.5 72 40-120 47-128 (172)
95 2dax_A Protein C21ORF6; RWD do 78.3 5.3 0.00018 34.1 6.9 26 299-324 73-98 (152)
96 1tte_A Ubiquitin-conjugating e 77.9 16 0.00056 33.5 10.5 96 10-118 7-109 (215)
97 2f4z_A Tgtwinscan_2721 - E2 do 77.8 5.5 0.00019 36.0 7.2 72 40-119 74-152 (193)
98 1y8x_A Ubiquitin-conjugating e 77.5 6.6 0.00022 34.2 7.4 72 40-120 34-111 (160)
99 2z5d_A Ubiquitin-conjugating e 77.3 4.2 0.00014 36.4 6.2 72 41-118 51-131 (179)
100 2ebk_A RWD domain-containing p 76.1 4.2 0.00014 33.5 5.5 58 265-322 12-79 (128)
101 1i7k_A Ubiquitin-conjugating e 75.9 6.7 0.00023 35.0 7.1 65 48-121 73-138 (179)
102 2nvu_C NEDD8-conjugating enzym 75.1 7.3 0.00025 34.7 7.1 60 40-106 54-119 (180)
103 2onu_A Ubiquitin-conjugating e 74.9 4.9 0.00017 34.7 5.8 61 40-106 28-95 (152)
104 3r3q_A Suppressor protein STP2 74.5 4.6 0.00016 35.8 5.6 55 299-356 81-150 (162)
105 3obq_A Tumor susceptibility ge 74.2 11 0.00036 33.0 7.8 108 10-124 25-138 (146)
106 1ayz_A UBC2, ubiquitin-conjuga 74.2 7.9 0.00027 34.0 7.1 68 10-85 9-82 (169)
107 1yf9_A Ubiquitin carrier prote 72.6 6.2 0.00021 34.8 6.0 61 40-106 37-104 (171)
108 3kpa_A Probable ubiquitin fold 70.8 1.2 4.1E-05 40.0 0.9 73 292-369 78-162 (168)
109 3obq_A Tumor susceptibility ge 68.0 6.5 0.00022 34.3 5.0 45 298-345 68-120 (146)
110 4ddg_A Ubiquitin-conjugating e 60.5 58 0.002 32.2 10.9 68 10-85 8-81 (399)
111 3ceg_A Baculoviral IAP repeat- 59.5 16 0.00054 35.8 6.5 46 40-85 109-163 (323)
112 2f4w_A Ubiquitin-conjugating e 58.4 18 0.0006 32.4 6.1 59 11-75 20-84 (187)
113 1zuo_A Hypothetical protein LO 51.9 11 0.00039 33.6 3.8 60 52-121 89-152 (186)
114 2lkt_A Retinoic acid receptor 31.9 58 0.002 26.6 4.8 94 276-374 10-123 (125)
115 3r3q_A Suppressor protein STP2 31.7 53 0.0018 29.0 4.7 107 9-121 32-153 (162)
116 2g7o_A Protein TRAM; four heli 30.2 34 0.0012 26.7 2.8 24 344-367 40-63 (70)
117 3zqs_A E3 ubiquitin-protein li 27.6 13 0.00046 33.7 0.1 56 48-114 121-179 (186)
No 1
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=96.56 E-value=0.017 Score=49.62 Aligned_cols=61 Identities=16% Similarity=0.255 Sum_probs=49.1
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-e-ee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-S-MY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~-yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~ 361 (381)
=.|-++|.+|..||..+|.++|.+ + || ..++|..|-+ .+++ -|||-|+-.....-|...+.
T Consensus 67 g~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl~-iL~~-~WsP~~ti~~vL~si~sll~ 131 (136)
T 2h2y_A 67 EVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICLS-VLGD-DYNPSLSISGLILSIISMLS 131 (136)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCCG-GGTT-TCCTTCCHHHHHHHHHHHHS
T ss_pred CEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEECc-cccC-CCCCCCcHHHHHHHHHHHHh
Confidence 368899999999999999999999 4 99 5589999887 4443 49999988877776665543
No 2
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=96.44 E-value=0.006 Score=51.55 Aligned_cols=61 Identities=18% Similarity=0.290 Sum_probs=49.1
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-e-ee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-S-MY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~-yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-++|.+|..||..+|.++|.+ + || ..++|..|-+ .+++ -|||.|+-.....-|...+.+
T Consensus 54 ~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl~-iL~~-~W~P~~~i~~vl~si~~ll~~ 118 (125)
T 2fo3_A 54 VYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLS-LLGD-DYNPSLSISGLVLSIISMLSS 118 (125)
T ss_dssp EEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCCG-GGTT-TCCTTCCHHHHHHHHHHHHC-
T ss_pred EEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEch-hcCC-CCCCCCcHHHHHHHHHHHHhC
Confidence 58899999999999999999999 4 99 5588998887 4432 499999988877776666544
No 3
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=96.09 E-value=0.044 Score=47.92 Aligned_cols=62 Identities=13% Similarity=0.186 Sum_probs=49.2
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eeecc---CCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMYFN---SQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH~~---s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
=.|-++|.+|..||..+|.++|.+ +||-+ ..|..|-+ .+++ -|||.|+......-|...+.+
T Consensus 58 g~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~-iL~~-~W~p~~~i~~vl~~i~~ll~~ 123 (159)
T 2bep_A 58 GRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLD-ILKD-QWAAAMTLRTVLLSLQALLAA 123 (159)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCG-GGTT-TCCTTCCHHHHHHHHHHHHHS
T ss_pred CEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeCh-hhhc-cCCCCCcHHHHHHHHHHHHhC
Confidence 358899999999999999999998 67744 37998886 4443 399999988887777766653
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=96.07 E-value=0.047 Score=47.35 Aligned_cols=63 Identities=21% Similarity=0.376 Sum_probs=51.3
Q ss_pred cceEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 298 AFSFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 298 ~F~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.=.|-+.|.+|..||..+|.++|.+ +|| .+++|..|-+ .+++ -|||.|+...+..-|...+.+
T Consensus 50 gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~-iL~~-~W~p~~~i~~vl~~i~~ll~~ 115 (151)
T 4gpr_A 50 GGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLD-ILKD-QWSPALTLSRVLLSISSLLTD 115 (151)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCG-GGTT-TCCTTCCHHHHHHHHHHHHHC
T ss_pred CCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEcc-cccC-CCCCCCcHHHHHHHHHHHhcC
Confidence 3458899999999999999999987 577 5689999986 4543 599999998888887776654
No 5
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=95.88 E-value=0.061 Score=46.51 Aligned_cols=62 Identities=23% Similarity=0.409 Sum_probs=50.1
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEee-ee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQSS-MY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS~-yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
=.|-++|.+|..||..+|.++|.+. || ..++|..|-+ .+++ -|||-|+...+..-|...+.+
T Consensus 51 g~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~-~W~p~~~i~~vl~~i~~ll~~ 115 (150)
T 1z2u_A 51 GVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD-ILRS-QWSPALTISKVLLSICSLLCD 115 (150)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCG-GGTT-TCCTTCCHHHHHHHHHHHHHS
T ss_pred CEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeec-cccC-CCCCCCCHHHHHHHHHHHhhC
Confidence 3588899999999999999999885 78 4478998886 4542 499999998888877776653
No 6
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=95.85 E-value=0.053 Score=47.22 Aligned_cols=63 Identities=17% Similarity=0.278 Sum_probs=50.7
Q ss_pred cceEEEEEeecCCCCCCCCeEEEEe-eeecc--CCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 298 AFSFLVLFFLSTQFPKQQPSLMLQS-SMYFN--SQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 298 ~F~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
+=.|-++|.+|..||..+|.++|.+ +||-+ ++|..|-+ .+++ -|||.|+...+..-|...|.+
T Consensus 51 gg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~-~W~p~~~i~~vl~~i~~ll~~ 116 (155)
T 1jat_A 51 DGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLD-VLKT-NWSPALQIRTVLLSIQALLAS 116 (155)
T ss_dssp TEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCG-GGTT-TCCTTCCHHHHHHHHHHHHHS
T ss_pred CcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEch-hhcc-CCCCCCCHHHHHHHHHHHHhC
Confidence 3468899999999999999999987 57744 78998886 4443 499999999888887776654
No 7
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=95.82 E-value=0.015 Score=50.55 Aligned_cols=61 Identities=18% Similarity=0.392 Sum_probs=48.6
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~ 361 (381)
=.|-++|.+|..||..+|.++|.+ +|| ..++|..|-+ .+++ -|||.|+...+..-|...+.
T Consensus 51 g~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~-~W~p~~~i~~vl~~i~~ll~ 114 (152)
T 2aak_A 51 GTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLD-ILQN-QWSPIYDVAAILTSIQSLLC 114 (152)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCG-GGTT-SCCTTCCHHHHHHHHHHHHT
T ss_pred CEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEech-hhcC-CCCCCCcHHHHHHHHHHHHh
Confidence 358889999999999999999987 677 4478998886 4443 49999998888777766554
No 8
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=95.74 E-value=0.021 Score=49.46 Aligned_cols=61 Identities=20% Similarity=0.373 Sum_probs=48.9
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEee-ee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQSS-MY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS~-yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~ 361 (381)
=.|-++|.+|..||..+|.++|.+- || ..++|..|-+ .+++ -|||.|+-.....-|...+.
T Consensus 48 g~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~-~W~p~~~i~~vl~~i~~ll~ 111 (149)
T 2r0j_A 48 GTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLD-ILKD-KWSPALQIRTVLLSIQALLS 111 (149)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCG-GGTT-TCCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEech-hcCC-CCCCCCcHHHHHHHHHHHHh
Confidence 3588999999999999999999885 88 4588998886 4542 49999988877777666554
No 9
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=95.71 E-value=0.092 Score=46.51 Aligned_cols=62 Identities=24% Similarity=0.406 Sum_probs=50.1
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
=.|-+.|.+|..||..+|.++|.+ +|| ..++|..|-+ .+++ -|||-|+......-|...|.+
T Consensus 68 G~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~-iL~~-~WsP~~ti~~vL~sI~sll~~ 132 (166)
T 2ayv_A 68 GVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLD-ILKD-QWSPALTISKVLLSISSLLTD 132 (166)
T ss_dssp CEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCG-GGTT-TCCTTCCHHHHHHHHHHHHHS
T ss_pred CEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEcc-cccc-cCCCCCcHHHHHHHHHHHHhC
Confidence 358899999999999999999998 588 4588999887 4543 599999988877777666653
No 10
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=95.61 E-value=0.018 Score=51.21 Aligned_cols=59 Identities=15% Similarity=0.434 Sum_probs=46.9
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFL 360 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl 360 (381)
.|-++|.+|..||-.+|.++|.+ +|| ..++|..|-+ .+++ -|||-|+......-|...|
T Consensus 52 ~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~-iL~~-~WsP~~~i~~vL~si~~ll 113 (169)
T 1ayz_A 52 TFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLD-ILQN-RWTPTYDVASILTSIQSLF 113 (169)
T ss_dssp EEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCG-GGTT-TCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeeh-hhcc-CCCCcCcHHHHHHHHHHHH
Confidence 58889999999999999999987 677 4478999987 4543 4999998877766655544
No 11
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=95.59 E-value=0.058 Score=46.61 Aligned_cols=61 Identities=20% Similarity=0.312 Sum_probs=49.1
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc--C-CCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN--S-QGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s-~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-++|.+|..||-.+|.++|.+ +||-+ + +|..|-+ .+++ -|||.|+...+..-|...+.+
T Consensus 50 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~-iL~~-~W~p~~~i~~vl~~i~~ll~~ 114 (149)
T 1fxt_A 50 KFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLD-ILKN-AWSPVITLKSALISLQALLQS 114 (149)
T ss_dssp EEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCH-HHHT-SCCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCC-cCCC-CCCCCCcHHHHHHHHHHHHhC
Confidence 58899999999999999999998 78854 4 7998876 4433 499999988888777766643
No 12
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=95.40 E-value=0.031 Score=49.19 Aligned_cols=61 Identities=13% Similarity=0.339 Sum_probs=48.4
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-++|.+|..||..+|.++|.+ +|| ..++|..|-+ .+++ -|||.|+-..+..-|...+.+
T Consensus 52 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~-~W~p~~~i~~vL~~i~~ll~~ 115 (160)
T 1y8x_A 52 KFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLN-ILRE-DWKPVLTINSIIYGLQYLFLE 115 (160)
T ss_dssp CEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCG-GGTT-TCCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcc-cchh-hccCCCCHHHHHHHHHHHHhC
Confidence 47889999999999999999988 688 4578998886 4432 499999988877777665543
No 13
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=95.32 E-value=0.014 Score=51.41 Aligned_cols=60 Identities=10% Similarity=0.262 Sum_probs=47.7
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc--CCCCc---cccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN--SQGMP---IKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s~g~p---~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-+.|.+|..||..+|.++|.+ +||-+ ++|.. |-+ .+++ |||-|+......-|...+.+
T Consensus 73 ~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~icisCL~-iL~~--WsP~~ti~~vL~sI~~ll~~ 138 (156)
T 2q0v_A 73 IYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGRVIKNNLH-ILKN--WNRNYTIETILISLRQEMLS 138 (156)
T ss_dssp EEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSBBCGGGSH-HHHT--CCTTCCHHHHHHHHHHHTTS
T ss_pred EEEEEEECCCcCCCCCCeEEEEcccccCCCccCCeEehhhcc-cccC--CCCcCcHHHHHHHHHHHHhC
Confidence 58899999999999999999987 67744 78998 554 4555 99999988877776665543
No 14
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=95.31 E-value=0.11 Score=45.32 Aligned_cols=61 Identities=10% Similarity=0.307 Sum_probs=48.1
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~ 361 (381)
=.|-++|.+|..||-.+|.++|.+ +|| ..++|..|-+ .+++ -|||.|+...+..-|...+.
T Consensus 56 g~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~-~W~p~~~i~~vL~si~~ll~ 119 (156)
T 2e2c_A 56 LKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLD-ILKE-NWTASYDVRTILLSLQSLLG 119 (156)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCG-GGTT-TCCTTCCHHHHHHHHHHHTT
T ss_pred cEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECc-cccc-cCCCCCcHHHHHHHHHHHHh
Confidence 358889999999999999999987 567 5578998886 4442 49999998887776665553
No 15
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=95.22 E-value=0.04 Score=48.75 Aligned_cols=61 Identities=23% Similarity=0.431 Sum_probs=49.6
Q ss_pred eEEEEEeecCCCCCCCCeEEEEee-ee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQSS-MY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS~-yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-+.|.+|..||..+|.++|.+. || ..++|..|-+ .++ =-|||-|+-.....-|...+.+
T Consensus 67 ~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~-iL~-~~W~P~~ti~~vL~si~~ll~~ 130 (165)
T 2c4o_A 67 VFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD-ILR-SQWSPALTISKVLLSICSLLCD 130 (165)
T ss_dssp EEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCG-GGT-TTCCTTCCHHHHHHHHHHHHHS
T ss_pred eEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeeh-hhc-CCCCCcCcHHHHHHHHHHHHhC
Confidence 588899999999999999999984 78 4588998887 454 2599999988888777776653
No 16
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=95.20 E-value=0.041 Score=48.72 Aligned_cols=61 Identities=13% Similarity=0.273 Sum_probs=47.2
Q ss_pred eEEEEEeecCCCCCCCCeEEEEee-ee--ccCCCCccccCCCCC---CCCCCCCChHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQSS-MY--FNSQGMPIKSPLLTD---YPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS~-yH--~~s~g~p~~s~~~~~---YPySPRW~~~eMa~R~~~fl~ 361 (381)
.|-++|.+|..||-.+|.++|.+- || ..++|..|-+ .++- =-|||.|+-.....-|...+.
T Consensus 52 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~-iL~~~~~~~W~p~~~i~~vL~si~~ll~ 118 (169)
T 1yh2_A 52 VFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLD-VLKLPPKGAWRPSLNIATVLTSIQLLMS 118 (169)
T ss_dssp EEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCG-GGSCTTTSCCCTTSCHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecc-cccCCcccCCCCCCcHHHHHHHHHHHHh
Confidence 588999999999999999999884 88 4588998886 4431 238999987777666655554
No 17
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=95.18 E-value=0.11 Score=47.14 Aligned_cols=84 Identities=11% Similarity=0.097 Sum_probs=58.6
Q ss_pred CCCccccccccceEeeeee------eCcceEEEEEeecCCCCCCCCeEEEEe-eeecc---CCCCccccCCCCCCCCCCC
Q 016870 277 GRPIETDSVFYRKSMFFVA------SGAFSFLVLFFLSTQFPKQQPSLMLQS-SMYFN---SQGMPIKSPLLTDYPWSPR 346 (381)
Q Consensus 277 G~~LEyDa~~f~k~slL~~------~~~F~flvHi~Lp~~FP~~qP~ltlQS-~yH~~---s~g~p~~s~~~~~YPySPR 346 (381)
|--++.+.++.......+. +..=.|-++|.+|..||..+|.++|.+ +||-+ ..|..|-+ .+++ -|||.
T Consensus 27 ~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~-iL~~-~W~p~ 104 (201)
T 3k9o_A 27 QIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLD-ILKD-QWAAA 104 (201)
T ss_dssp SEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCG-GGTT-TCCTT
T ss_pred CEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCc-cccc-CCCCC
Confidence 4335554445554444432 123458899999999999999999998 78855 37998886 4443 69999
Q ss_pred CChHHHHHHHHHHHHH
Q 016870 347 WEHSQMAERTFEFLVD 362 (381)
Q Consensus 347 W~~~eMa~R~~~fl~~ 362 (381)
|+-.....-|...+.+
T Consensus 105 ~~i~~vL~~i~~ll~~ 120 (201)
T 3k9o_A 105 MTLRTVLLSLQALLAA 120 (201)
T ss_dssp CCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHhcC
Confidence 9988777766666543
No 18
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=95.10 E-value=0.049 Score=47.31 Aligned_cols=62 Identities=13% Similarity=0.370 Sum_probs=49.7
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-++|.+|..||..+|.++|.+ +|| ..++|..|-+ .++.=-|||.|+...+..-|...+.+
T Consensus 50 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~~~W~p~~~i~~vl~~i~~ll~~ 114 (154)
T 1c4z_D 50 AFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLP-VISAENWKPATKTDQVIQSLIALVND 114 (154)
T ss_dssp CEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCCT-TTSSSSCCTTCCHHHHHHHHHHHHHS
T ss_pred eEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEECC-CCCCCCCCCCCcHHHHHHHHHHHHcC
Confidence 47789999999999999999988 488 6689999987 55433599999988877777666543
No 19
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=95.09 E-value=0.041 Score=49.53 Aligned_cols=62 Identities=13% Similarity=0.321 Sum_probs=49.2
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
=.|-+.|.+|..||-.+|.++|.+ +|| ..++|..|-+ .+++ -|||-|+-.....-|...+.+
T Consensus 77 G~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~-iL~~-~WsP~~ti~~vL~sI~sll~~ 141 (179)
T 1i7k_A 77 LRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLD-ILKE-KWSALYDVRTILLSIQSLLGE 141 (179)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCG-GGTT-TCCTTCCHHHHHHHHHHHHHS
T ss_pred CEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEcc-cCcC-cCCCCCCHHHHHHHHHHHHhC
Confidence 358899999999999999999987 678 5578998887 4543 499999988777666665543
No 20
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=95.06 E-value=0.028 Score=49.23 Aligned_cols=61 Identities=15% Similarity=0.250 Sum_probs=48.2
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeec--cCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYF--NSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~--~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-+.|.+|..||..+|.++|.+ +||- .++|..|-+ .+++ -|||.|+......-|...+.+
T Consensus 61 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~-~W~p~~~i~~vL~~i~~ll~~ 124 (158)
T 1zdn_A 61 LFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVN-VLKR-DWTAELGIRHVLLTIKCLLIH 124 (158)
T ss_dssp EEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHH-HHTT-TCCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehh-hcCC-CCCCCCcHHHHHHHHHHHHhC
Confidence 58889999999999999999987 5774 367998886 4432 499999988777777666543
No 21
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=94.96 E-value=0.024 Score=49.87 Aligned_cols=63 Identities=16% Similarity=0.136 Sum_probs=50.1
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eeecc--CCCCccccCCCCC-----CCCCCCCChHHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMYFN--SQGMPIKSPLLTD-----YPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s~g~p~~s~~~~~-----YPySPRW~~~eMa~R~~~fl~~ 362 (381)
=.|-++|.+|..||..+|.++|.+ +||-+ .+|..|-+ .+++ --|||.|+...+..-|...|.+
T Consensus 61 g~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~-iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~ 131 (167)
T 3fn1_B 61 GKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLS-LLREHSIDGTGWAPTRTLKDVVWGLNSLFTD 131 (167)
T ss_dssp CCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCCG-GGSBCSSSTTSBCTTCCHHHHHHHHHHTTTT
T ss_pred CEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEech-hhccCCCCCCCCCCcCcHHHHHHHHHHHHcC
Confidence 347888999999999999999988 67744 78999987 4443 2599999988887777766655
No 22
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=94.94 E-value=0.065 Score=46.13 Aligned_cols=57 Identities=26% Similarity=0.475 Sum_probs=44.1
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEee-e--e--ccCCCCccccCCCCCCCCCCCCChHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQSS-M--Y--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTF 357 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS~-y--H--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~ 357 (381)
=.|-+.|.+|..||..+|.++|.+- | | ..++|..|-+ .+++ -|||-|+-.....-|.
T Consensus 71 G~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ICL~-iL~~-~WsP~~ti~~vL~sI~ 132 (136)
T 2a7l_A 71 EKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLS-ILTE-DWSPALSVQSVCLSII 132 (136)
T ss_dssp CEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCBBCCG-GGTT-TCCTTSCHHHHHHHHH
T ss_pred EEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCeEEch-hcCC-CCCCCCcHHHHHHHHH
Confidence 3688999999999999999999984 5 7 4478998886 4442 4889888766555443
No 23
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=94.84 E-value=0.041 Score=48.12 Aligned_cols=61 Identities=15% Similarity=0.267 Sum_probs=48.3
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeec--cCCCCccccCCCCCC-CCCCCCChHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYF--NSQGMPIKSPLLTDY-PWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~--~s~g~p~~s~~~~~Y-PySPRW~~~eMa~R~~~fl~ 361 (381)
.|-+.|.+|..||..+|.++|.+ +||- .++|..|-+ .+++- -|||.|+-.....-|...+.
T Consensus 57 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~~~~W~p~~~i~~vl~~i~~ll~ 121 (157)
T 2gjd_A 57 VYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLS-ILNEDQDWRPAITLKQIVLGVQDLLD 121 (157)
T ss_dssp EEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSBBCCG-GGCTTTTCCTTCCHHHHHHHHHHHHT
T ss_pred EEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCcEeee-cccCCCCCCCCCcHHHHHHHHHHHHh
Confidence 58899999999999999999987 6773 378998886 45442 49999998887777666553
No 24
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=94.84 E-value=0.051 Score=48.80 Aligned_cols=60 Identities=15% Similarity=0.284 Sum_probs=47.3
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc--CCCCccccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN--SQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~ 361 (381)
.|-++|.+|..||-.+|.++|.+ +||-+ ++|..|-+ .++ =-|||.|+-.....-|...+.
T Consensus 72 ~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~-iL~-~~W~p~~~i~~vL~si~~ll~ 134 (180)
T 2nvu_C 72 KFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALN-ILR-EDWKPVLTINSIIYGLQYLFL 134 (180)
T ss_dssp CEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCG-GGT-TSCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEcc-ccc-ccCCCCCCHHHHHHHHHHHHh
Confidence 47889999999999999999988 67744 78998886 443 249999998877776665554
No 25
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=94.82 E-value=0.059 Score=47.30 Aligned_cols=61 Identities=18% Similarity=0.315 Sum_probs=46.9
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCC------------CCCCCCCCChHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLT------------DYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~------------~YPySPRW~~~eMa~R~~~fl~ 361 (381)
.|-++|.+|..||-.+|.++|.+ +|| ..++|..|-+ .+. .=-|||-|+......-|...+.
T Consensus 53 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~-iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~ 128 (165)
T 2ucz_A 53 VFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCIS-ILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLS 128 (165)
T ss_dssp EEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCCG-GGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEeeh-hhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHh
Confidence 58899999999999999999988 677 5578999887 442 2248888887766666665554
No 26
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=94.72 E-value=0.036 Score=51.35 Aligned_cols=60 Identities=20% Similarity=0.313 Sum_probs=47.6
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc--C-CCCccccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN--S-QGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s-~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~ 361 (381)
.|-++|.+|..||-.+|.++|.+ +||-+ + .|..|-+ .+++ -|||-|+-.....-|...|.
T Consensus 51 ~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~-iL~~-~WsP~~ti~~VL~sI~sLL~ 114 (215)
T 1tte_A 51 KFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLD-ILRN-AWSPVITLKSALISLQALLQ 114 (215)
T ss_dssp CCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSS-TTTC-CSCTTCCHHHHHHHHHHHHT
T ss_pred EEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECc-cCCC-CCCCcCcHHHHHHHHHHHHh
Confidence 47889999999999999999988 78855 4 7998887 5543 59999988777666655543
No 27
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=94.71 E-value=0.072 Score=46.63 Aligned_cols=62 Identities=16% Similarity=0.277 Sum_probs=48.8
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCC------------CCCCCCCCChHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLT------------DYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~------------~YPySPRW~~~eMa~R~~~fl~ 361 (381)
=.|-+.|.+|..||..+|.++|.+ +|| ..++|..|-+ .++ +=-|||.|+...+..-|...|.
T Consensus 51 g~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl~-iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~ 127 (164)
T 3h8k_A 51 GVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCIS-ILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLA 127 (164)
T ss_dssp CEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCCG-GGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEeee-cccCcccccccccccccCCCCCCcHHHHHHHHHHHHc
Confidence 357888999999999999999998 577 4478999887 453 1349999998888777766654
No 28
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=94.69 E-value=0.2 Score=45.50 Aligned_cols=63 Identities=24% Similarity=0.414 Sum_probs=50.1
Q ss_pred cceEEEEEeecCCCCCCCCeEEEEe-eeecc--CCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 298 AFSFLVLFFLSTQFPKQQPSLMLQS-SMYFN--SQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 298 ~F~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.=.|-++|.+|..||..+|.++|.+ +||-+ ++|..|-+ .+++ -|+|-|+...+..-|...|.+
T Consensus 94 gG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~-iL~~-~WsP~~ti~~vL~sI~~ll~~ 159 (194)
T 3bzh_A 94 GGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLD-ILKD-NWSPALTISKVLLSICSLLTD 159 (194)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCG-GGTT-TCCTTCCHHHHHHHHHHHHHS
T ss_pred CCEEEEEEECCCcCCCCCccccccCCCccceECCCCceech-hhhc-cCCCcCcHHHHHHHHHHHHhC
Confidence 3468899999999999999999986 47744 78998886 4543 499999988888777766654
No 29
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=94.69 E-value=0.027 Score=49.08 Aligned_cols=59 Identities=19% Similarity=0.338 Sum_probs=46.4
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeec--cCCCCccccCCCCCCCCCCCCChHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYF--NSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFL 360 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~--~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl 360 (381)
.|-++|.+|..||-.+|.++|.+ +||- .++|..|-+ .++ =-|||.|+-.....-|...+
T Consensus 53 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~-~~W~p~~~i~~vl~~i~~ll 114 (154)
T 2c2v_B 53 TFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLD-ILK-DKWSPALQIRTVLLSIQALL 114 (154)
T ss_dssp EEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCH-HHH-TSCCTTCCHHHHHHHHHHHT
T ss_pred eEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEch-hcc-CCCCCCCcHHHHHHHHHHHH
Confidence 58889999999999999999998 6773 477998876 443 34999999887776665554
No 30
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=94.57 E-value=0.079 Score=46.05 Aligned_cols=62 Identities=13% Similarity=0.252 Sum_probs=49.0
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeec--cCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYF--NSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~--~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-++|.+|..||..+|.++|.+ +||- +++|..|-+ .++.=-|||.|+......-|...+.+
T Consensus 52 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~-iL~~~~W~p~~~i~~vl~~i~~ll~~ 116 (155)
T 1wzv_A 52 AFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLP-IISSENWKPCTKTCQVLEALNVLVNR 116 (155)
T ss_dssp EEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCCG-GGCTTTCCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEeec-CCCccCCCCCCcHHHHHHHHHHHHhC
Confidence 58899999999999999999987 6774 378998886 45223499999988877777665543
No 31
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=94.50 E-value=0.08 Score=46.43 Aligned_cols=61 Identities=20% Similarity=0.342 Sum_probs=48.9
Q ss_pred eEEEEEeecCCCCCCCCeEEEEee-eecc--CCCCccccCCCCC-CCCCCCCChHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQSS-MYFN--SQGMPIKSPLLTD-YPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS~-yH~~--s~g~p~~s~~~~~-YPySPRW~~~eMa~R~~~fl~ 361 (381)
.|-++|.+|..||..+|.++|.+. ||-+ ++|..|-+ .+++ =-|||.|+...+..-|...+.
T Consensus 60 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~-iL~~~~~W~p~~~i~~vl~~i~~ll~ 124 (161)
T 2grr_A 60 LFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS-ILEEDKDWRPAITIKQILLGIQELLN 124 (161)
T ss_dssp EEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTSBBCCG-GGCTTTTCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEEcCcccCCCCCEEEEecCcccCCCCCCCeEeeh-hcCCCCCcCCCCcHHHHHHHHHHHHh
Confidence 478899999999999999999884 7743 78998886 4543 259999999888877776654
No 32
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=94.48 E-value=0.28 Score=43.87 Aligned_cols=63 Identities=14% Similarity=0.227 Sum_probs=47.9
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCC------------CCCCCCCCChHHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLT------------DYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~------------~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
=.|-+.|.+|..||..+|.++|.+ +|| ..++|..|-+ .++ +=-|||.|+......-|...|.+
T Consensus 55 g~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCls-iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~ 132 (183)
T 3rz3_A 55 GYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCIS-ILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNE 132 (183)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCCT-TC--------------CCCCTTCCHHHHHHHHHHHHHS
T ss_pred CeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEehh-hcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhC
Confidence 347888899999999999999997 567 3478999987 453 23599999987777666666544
No 33
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=94.48 E-value=0.23 Score=44.76 Aligned_cols=63 Identities=19% Similarity=0.418 Sum_probs=46.3
Q ss_pred cceEEEEEeecCCCCCCCCeEEEEeeee--ccCCCCccccCCCC--CCCCCCCCChHHHHHHHHHHHHH
Q 016870 298 AFSFLVLFFLSTQFPKQQPSLMLQSSMY--FNSQGMPIKSPLLT--DYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 298 ~F~flvHi~Lp~~FP~~qP~ltlQS~yH--~~s~g~p~~s~~~~--~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
+=.|-++|.+|..||-.+|.+.|.+- | +..+|..|-+ .++ .=-|||.|+...+..-|..++.+
T Consensus 60 gG~f~l~i~fP~~YP~~PP~v~f~T~-~~~~~~~G~ICL~-iL~~~~~~W~P~~ti~~vL~si~sll~~ 126 (187)
T 2f4w_A 60 GGYYHGKLIFPREFPFKPPSIYMITP-NGRFKCNTRLCLS-ITDFHPDTWNPAWSVSTILTGLLSFMVE 126 (187)
T ss_dssp TCEEEEEEECCTTTTSSCCEEEECSC-CSSBCTTSCBC-----------CCTTCCHHHHHHHHHHHHHS
T ss_pred CCEEEEEEEcCCCCCCCCCcccccCC-CceeccCCeEeee-ccccCccCCCCcCcHHHHHHHHHHHhcC
Confidence 33688999999999999999999986 4 4568998886 442 12499999998888887777754
No 34
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=94.19 E-value=0.061 Score=46.04 Aligned_cols=61 Identities=10% Similarity=0.091 Sum_probs=47.4
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eeecc--CC-CCc--cccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMYFN--SQ-GMP--IKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s~-g~p--~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
=.|-++|.+|..||..+|.++|.+ +||-+ ++ |.. |-+ .++ -|||.|+-.....-|...+.+
T Consensus 57 g~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~-~l~--~W~p~~~i~~vl~~i~~ll~~ 123 (138)
T 1jat_B 57 RIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFH-TLR--DWKRAYTMETLLLDLRKEMAT 123 (138)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSH-HHH--TCCTTCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecc-cCC--CCCCcCcHHHHHHHHHHHHcC
Confidence 358899999999999999999987 68854 44 876 443 234 499999988888777766654
No 35
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=94.16 E-value=0.092 Score=47.79 Aligned_cols=60 Identities=17% Similarity=0.286 Sum_probs=48.3
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc---CCCCccccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN---SQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~---s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~ 361 (381)
.|-+.|.+|..||-.+|.++|.+ +||-+ ..|..|-+ .+++ -|||-|+......-|...|.
T Consensus 93 ~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~-iL~~-~WsP~~ti~~vL~sI~sll~ 156 (193)
T 2f4z_A 93 HFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLD-ILKH-EWSPALTIRTALLSIQAMLA 156 (193)
T ss_dssp EEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCG-GGTT-TCCTTSCHHHHHHHHHHHHH
T ss_pred EEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECc-cccc-cCCCCCCHHHHHHHHHHHHh
Confidence 58899999999999999999998 68844 36998886 5543 49999998877776666554
No 36
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=94.12 E-value=0.092 Score=47.52 Aligned_cols=61 Identities=13% Similarity=0.248 Sum_probs=49.1
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeec--cCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYF--NSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~--~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-+.|.+|..||..+|.++|.+ +||- +++|..|-+ .++ =-|||.|+......-|...+.+
T Consensus 81 ~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~-iL~-~~W~p~~~i~~vL~~i~~ll~~ 144 (190)
T 3o2u_A 81 SINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLN-ILR-EDWSPALDLQSIITGLLFLFLE 144 (190)
T ss_dssp CEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCG-GGT-TTCCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEech-hcc-CCCCCCCCHHHHHHHHHHHHhC
Confidence 47889999999999999999987 4774 368999887 444 3699999988887777766654
No 37
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=93.94 E-value=0.1 Score=46.10 Aligned_cols=62 Identities=16% Similarity=0.257 Sum_probs=49.0
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eeecc--CCCCccccCCCCCC-CCCCCCChHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMYFN--SQGMPIKSPLLTDY-PWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s~g~p~~s~~~~~Y-PySPRW~~~eMa~R~~~fl~ 361 (381)
=.|-+.|.+|..||..+|.++|.+ +||-+ ++|..|-+ .+++- -|||-|+...+..-|...|.
T Consensus 62 g~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G~iCl~-iL~~~~~W~p~~ti~~vL~~i~~ll~ 127 (163)
T 3rcz_B 62 GLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLS-ILNEEEGWKPAITIKQILLGIQDLLD 127 (163)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTSBBCCG-GGCTTTTCCTTCCHHHHHHHHHHHHT
T ss_pred CEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCCcEecc-ccCCCCCcCCcCcHHHHHHHHHHHHh
Confidence 457889999999999999999997 56733 77999887 45432 39999999888777776664
No 38
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=93.84 E-value=0.4 Score=45.45 Aligned_cols=84 Identities=11% Similarity=0.097 Sum_probs=58.2
Q ss_pred CCCccccccccceEeeeee------eCcceEEEEEeecCCCCCCCCeEEEEe-eeecc---CCCCccccCCCCCCCCCCC
Q 016870 277 GRPIETDSVFYRKSMFFVA------SGAFSFLVLFFLSTQFPKQQPSLMLQS-SMYFN---SQGMPIKSPLLTDYPWSPR 346 (381)
Q Consensus 277 G~~LEyDa~~f~k~slL~~------~~~F~flvHi~Lp~~FP~~qP~ltlQS-~yH~~---s~g~p~~s~~~~~YPySPR 346 (381)
|--++.+.++.......+. +..=.|-+.|.+|..||-.+|.++|.+ +||-+ ..|..|-+ .+++ -|||.
T Consensus 79 gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~-iL~~-~WsP~ 156 (253)
T 3e46_A 79 QIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLD-ILKD-QWAAA 156 (253)
T ss_dssp SEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCG-GGTT-CCCTT
T ss_pred CEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecc-cccC-CCCCC
Confidence 4335544444444444332 223458899999999999999999987 78854 37998886 4443 69999
Q ss_pred CChHHHHHHHHHHHHH
Q 016870 347 WEHSQMAERTFEFLVD 362 (381)
Q Consensus 347 W~~~eMa~R~~~fl~~ 362 (381)
|+......-|...|.+
T Consensus 157 ~ti~~vL~sI~~ll~~ 172 (253)
T 3e46_A 157 MTLRTVLLSLQALLAA 172 (253)
T ss_dssp CCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHhcC
Confidence 9988877776666543
No 39
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=93.78 E-value=0.11 Score=46.01 Aligned_cols=63 Identities=17% Similarity=0.455 Sum_probs=50.2
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe--eeecc---CCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS--SMYFN---SQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS--~yH~~---s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
=.|-+.|.+|..||..+|.++|.+ +||-+ ..|..|-+ .++.=-|||-|+-..+..-|...+.+
T Consensus 65 g~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~-iL~~~~W~p~~~i~~vL~si~~ll~~ 132 (172)
T 2y9m_A 65 HQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLN-ILKPEEWTPVWDLLHCVHAVWRLLRE 132 (172)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCG-GGSTTTCCTTCCHHHHHHHHHHHHHS
T ss_pred CEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEecc-ccCCCCCCCcCcHHHHHHHHHHHHhC
Confidence 358899999999999999999998 78854 46998886 55523599999988887777766553
No 40
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=93.39 E-value=0.14 Score=45.55 Aligned_cols=62 Identities=16% Similarity=0.311 Sum_probs=47.7
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCC------------CCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTD------------YPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~------------YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-+.|.+|..||..+|.++|.+ +|| ..++|..|-+ .++. =-|||.|+......-|...|.+
T Consensus 66 ~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~ICls-iL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~ 142 (172)
T 2awf_A 66 VFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCIS-ILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLAD 142 (172)
T ss_dssp EEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCG-GGSCC---------CTTSCCTTCCHHHHHHHHHHHHSC
T ss_pred EEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEehh-hcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHC
Confidence 58889999999999999999998 477 4478999987 4542 1488888877776666665543
No 41
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=93.33 E-value=0.11 Score=46.11 Aligned_cols=61 Identities=8% Similarity=0.192 Sum_probs=46.9
Q ss_pred eEEEEEeecCCCCCCCCeEEEEee-eecc---CCCCccccCCCCC-CCCCCCCChHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQSS-MYFN---SQGMPIKSPLLTD-YPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS~-yH~~---s~g~p~~s~~~~~-YPySPRW~~~eMa~R~~~fl~ 361 (381)
.|-+.|.+|..||..+|.++|.+- ||-+ +.|..|-+ .++- =-|||-|+......-|...+.
T Consensus 77 ~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~-iL~~~~~WsP~~ti~~vL~sI~~ll~ 142 (160)
T 2a4d_A 77 IYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPR-AISVLAKWQNSYSIKVVLQELRRLMM 142 (160)
T ss_dssp EEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGG-GSHHHHTCCTTCCHHHHHHHHHHHHT
T ss_pred EEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehh-hcCCccCCCccCcHHHHHHHHHHHHc
Confidence 588999999999999999999885 8854 47988765 2320 139999988887777766654
No 42
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=93.16 E-value=0.066 Score=49.61 Aligned_cols=61 Identities=16% Similarity=0.258 Sum_probs=48.0
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eeecc---CCCCccccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMYFN---SQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH~~---s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~ 361 (381)
=.|-+.|.+|..||-.+|.++|.+ +||-| ..|..|-+ .+++ -|||-|+-.....-|...|.
T Consensus 70 G~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~-iL~~-~WsP~~ti~~VL~sI~sLL~ 134 (216)
T 2pwq_A 70 GHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLD-VLKN-EWSPALTIRTALLSIQALLS 134 (216)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCH-HHHH-HCCTTCCHHHHHHHHHHHHH
T ss_pred eEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEch-hhcc-cCCCCCcHHHHHHHHHHHHh
Confidence 358999999999999999999998 78855 36888876 4443 39999998877766665554
No 43
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=93.10 E-value=0.13 Score=45.23 Aligned_cols=62 Identities=11% Similarity=0.320 Sum_probs=46.8
Q ss_pred cceEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016870 298 AFSFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLV 361 (381)
Q Consensus 298 ~F~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~ 361 (381)
.=.|.++|.+|..||..+|.++|.+ +|| .+++|..|-+ .++ =-|||-|+.....-.+...|.
T Consensus 68 gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~-il~-~~W~p~~~i~~vll~~l~~l~ 132 (167)
T 4ds2_A 68 GNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDR-MVN-DFWTPDQHASDVIKLVLDRVF 132 (167)
T ss_dssp CCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTH-HHH-TTCCTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcc-cCc-CCCCCCCChHHHHHHHHHHHH
Confidence 4568888999999999999999988 577 3478998886 343 359999998776555444444
No 44
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=93.09 E-value=0.068 Score=46.59 Aligned_cols=54 Identities=19% Similarity=0.328 Sum_probs=42.8
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc---CCCCccccCCCCCCCCCCCCChHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN---SQGMPIKSPLLTDYPWSPRWEHSQMAER 355 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~---s~g~p~~s~~~~~YPySPRW~~~eMa~R 355 (381)
.|-++|.+|..||..+|.++|.+ +||-+ ..|..|-+ .++ --|||.|+......-
T Consensus 47 ~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~-il~-~~W~p~~~i~~vl~~ 104 (152)
T 2onu_A 47 IWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLD-VIN-QTWTPLYSLVNVFEV 104 (152)
T ss_dssp EEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHH-HHH-HHCCTTCCHHHHHHT
T ss_pred EEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEecc-ccc-ccCCCCCCHHHHHHH
Confidence 58899999999999999999997 78855 37888876 443 249999987766544
No 45
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=93.02 E-value=0.057 Score=48.11 Aligned_cols=55 Identities=15% Similarity=0.386 Sum_probs=44.2
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc---CCCCccccCCCCCCCCCCCCChHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN---SQGMPIKSPLLTDYPWSPRWEHSQMAERT 356 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~---s~g~p~~s~~~~~YPySPRW~~~eMa~R~ 356 (381)
.|-++|.+|..||..+|.++|.+ +||-+ ++|..|-+ .+++ -|||-|+......-|
T Consensus 56 ~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~-iL~~-~W~p~~~i~~vL~si 114 (171)
T 1yf9_A 56 TWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLD-VINQ-TWTPMYQLENIFDVF 114 (171)
T ss_dssp EEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHH-HHHH-HCCTTCCTHHHHHTH
T ss_pred eEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEecc-cccc-CCCCCCcHHHHHHHH
Confidence 58899999999999999999997 78854 47988876 3432 399999988776654
No 46
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=92.67 E-value=0.11 Score=51.16 Aligned_cols=61 Identities=18% Similarity=0.361 Sum_probs=47.2
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe------eeecc--CCCCccccCCCCCC------CCCCCC-ChHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS------SMYFN--SQGMPIKSPLLTDY------PWSPRW-EHSQMAERTFEFL 360 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS------~yH~~--s~g~p~~s~~~~~Y------PySPRW-~~~eMa~R~~~fl 360 (381)
=.|.+.|.+|..||..+|.++|.+ +||-+ ++|..|-+ .++.+ -|||-| +-.....-|...|
T Consensus 127 G~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLs-iL~~~~g~~~e~WsPa~stI~~VLlsIqsLL 202 (323)
T 3ceg_A 127 GCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLS-ILNTWHGRPEEKWNPQTSSFLQVLVSVQSLI 202 (323)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCG-GGTSSCCCGGGSCCTTTCCHHHHHHHHHHHT
T ss_pred CEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEech-hhccccCCCcCCCCcCcCCHHHHHHHHHHHH
Confidence 358899999999999999999998 79954 78999987 66543 488888 5555555555444
No 47
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=92.42 E-value=0.21 Score=49.78 Aligned_cols=62 Identities=23% Similarity=0.397 Sum_probs=49.0
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-eee--ccCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-SMY--FNSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-~yH--~~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
=.|-++|.+|..||-.+|.++|.+ +|| .++.|..|-+ .+.+ -|||-|+......-|...+.+
T Consensus 50 g~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~-il~~-~W~p~~~i~~vL~~i~~ll~~ 114 (399)
T 4ddg_A 50 GVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLD-ILRS-QWSPALTISKVLLSICSLLCD 114 (399)
T ss_dssp CEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCG-GGTT-SCCTTCCHHHHHHHHHHHHHS
T ss_pred CEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCc-cccc-CCCccccHHHHHHHHHHHHcC
Confidence 447889999999999999999987 677 4478998886 4433 599999988877766665543
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=92.13 E-value=0.17 Score=45.15 Aligned_cols=62 Identities=8% Similarity=0.181 Sum_probs=47.1
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc---CCCCccccCCCCC-CCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN---SQGMPIKSPLLTD-YPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~---s~g~p~~s~~~~~-YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-++|.+|..||..+|.++|.+ +||-+ +.|..|-+ .++- =-|||-|+-.....-|...|.+
T Consensus 87 ~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~-iL~~~~~WsP~~ti~~vL~sI~~ll~~ 153 (170)
T 2hlw_A 87 IYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPR-AISVLAKWQNSYSIKVVLQELRRLMMS 153 (170)
T ss_dssp CBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTT-TCHHHHTCCSSCCHHHHHHHHHHHHHS
T ss_pred EEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhh-hcCCCCCCCccCcHHHHHHHHHHHHcc
Confidence 46788899999999999999988 48854 57988765 3320 1399999988887777766653
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=92.11 E-value=0.32 Score=43.84 Aligned_cols=62 Identities=21% Similarity=0.252 Sum_probs=50.6
Q ss_pred eEEEEEeecCCCCCCCCeEEEEee-eec---cCCCCccccCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQSS-MYF---NSQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS~-yH~---~s~g~p~~s~~~~~YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|.+.|.+|..||-.+|.+.|.+. +|- .+.|..|-+ .++.=-|||-|+......-|...|.+
T Consensus 90 ~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~-iL~~~~WsP~~ti~~VL~sI~slL~~ 155 (186)
T 1zuo_A 90 YILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCME-LLTKQGWSSAYSIESVIMQINATLVK 155 (186)
T ss_dssp SEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCCG-GGSTTTCCTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEec-cCCCCCCCCcCcHHHHHHHHHHHHcC
Confidence 688999999999999999999874 554 368998886 56533599999998888888777765
No 50
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=92.06 E-value=0.086 Score=47.49 Aligned_cols=60 Identities=17% Similarity=0.324 Sum_probs=45.8
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc--C-CCCccccCCCCCCCCCCCCChHHHHHH-HHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN--S-QGMPIKSPLLTDYPWSPRWEHSQMAER-TFEFLV 361 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~--s-~g~p~~s~~~~~YPySPRW~~~eMa~R-~~~fl~ 361 (381)
.|-+.|.+|..||-.+|.++|.+ +||-+ + +|..|-+ .+++ -|||.|+......- |...+.
T Consensus 69 ~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~-iL~~-~WsP~~ti~~iL~s~I~~Ll~ 133 (179)
T 2z5d_A 69 VWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLD-VINQ-TWTALYDLTNIFESFLPQLLA 133 (179)
T ss_dssp EEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHH-HHHH-HCCTTCCTTHHHHTHHHHHHH
T ss_pred EEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEecc-cccc-CCCCCCCHHHHHHHHHHHHHh
Confidence 58889999999999999999987 67743 4 7888875 3332 49999998877766 554443
No 51
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=91.38 E-value=0.15 Score=45.25 Aligned_cols=62 Identities=15% Similarity=0.306 Sum_probs=48.7
Q ss_pred eEEEEEeecCCCCCCCCeEEEEe-eeecc---CCCCccccCCCCC-CCCCCCCChHHHHHHHHHHHHH
Q 016870 300 SFLVLFFLSTQFPKQQPSLMLQS-SMYFN---SQGMPIKSPLLTD-YPWSPRWEHSQMAERTFEFLVD 362 (381)
Q Consensus 300 ~flvHi~Lp~~FP~~qP~ltlQS-~yH~~---s~g~p~~s~~~~~-YPySPRW~~~eMa~R~~~fl~~ 362 (381)
.|-+.|.+|..||..+|.++|.+ +||-+ ..|..|-+ .++. =-|||-|+-.....-|...+.+
T Consensus 71 ~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~-iL~~~~~WsP~~ti~~vL~sI~sll~~ 137 (169)
T 1yrv_A 71 VFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCID-FLDNPEKWNTNYTLSSILLALQVMLSN 137 (169)
T ss_dssp EEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCH-HHHCGGGCCTTCCHHHHHHHHHHHHTS
T ss_pred EEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeeh-hhcCCcCCCCcCCHHHHHHHHHHHHhC
Confidence 58899999999999999999998 78853 67988876 4441 2499999988777776665543
No 52
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.07 E-value=1.4 Score=38.22 Aligned_cols=63 Identities=14% Similarity=0.102 Sum_probs=40.1
Q ss_pred cceEEEEEeecCCCCCCCCeEEEEeeeeccCCCCc-----cccCCCCCCCCCCCCChHHHHHHHHHHHHHHhHhH
Q 016870 298 AFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMP-----IKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNF 367 (381)
Q Consensus 298 ~F~flvHi~Lp~~FP~~qP~ltlQS~yH~~s~g~p-----~~s~~~~~YPySPRW~~~eMa~R~~~fl~~~~~~F 367 (381)
+..+.+||.+|..||...|.|.+.+. +++..-.. +.....++ +-|..|.=-+.+||.|++..+
T Consensus 74 ~~~i~L~v~lP~~YP~~~P~i~l~~~-~l~~~~~~~L~~~L~~~l~~~------~lG~~mif~lve~lqe~~~~~ 141 (154)
T 2daw_A 74 KVKIDLQVTMPHSYPYLALQLFGRSS-ELDRHQQLLLNKGLTSYIGTF------DPGELCVCAAIQWLQDNSASY 141 (154)
T ss_dssp TEEEEEEEEECSSTTSSCCEEEEECS-SSCHHHHHHHHHHHHHHHTTS------CTTSCSHHHHHHHHHHTTHHH
T ss_pred CceEEEEEEcCCCCCCCCCcEEEEeC-CCCHHHHHHHHHHHHHHHHHh------cCCCcHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999886 33211100 01001111 446667777777777776554
No 53
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=90.26 E-value=4.4 Score=33.78 Aligned_cols=98 Identities=17% Similarity=0.309 Sum_probs=62.9
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCC-CCcC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDE-DFHP 82 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~-~F~p 82 (381)
|...++-|..+-+..+.+.- .+ .....+...| ||.+-..+-+|.|-.+||..||.+.|- -. -|+|
T Consensus 11 L~kEl~~l~~~~~~~~~~~~--~~----~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~--t~i~~HP 82 (125)
T 2fo3_A 11 IQKELHNFLNNPPINCTLDV--HP----NNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFL--QKPPKHT 82 (125)
T ss_dssp HHHHHHHHHHSCCTTEEEEE--CT----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEEC--SSCCCBT
T ss_pred HHHHHHHHHhCCCCCEEEEe--Cc----chhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEe--CCCCCCC
Confidence 45556666666555565542 11 1256666655 699999999999999999999999995 34 3999
Q ss_pred CCCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHHHH
Q 016870 83 FYNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRDQY 122 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~~Y 122 (381)
++.. ++..-. ..| .+|++. -.+..++..|+.+.
T Consensus 83 nv~~-~G~iCl----~iL~~~W~P~--~~i~~vl~si~~ll 116 (125)
T 2fo3_A 83 HVYS-NGDICL----SLLGDDYNPS--LSISGLVLSIISML 116 (125)
T ss_dssp TBCT-TSBBCC----GGGTTTCCTT--CCHHHHHHHHHHHH
T ss_pred cCCC-CCEEEc----hhcCCCCCCC--CcHHHHHHHHHHHH
Confidence 7642 222211 223 579985 35555555555544
No 54
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=89.80 E-value=0.73 Score=39.25 Aligned_cols=78 Identities=17% Similarity=0.331 Sum_probs=54.0
Q ss_pred CceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhcccCCCCCcchHHH
Q 016870 40 LDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLA 113 (381)
Q Consensus 40 ~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL~~Wd~~dp~~Ll~ 113 (381)
...++..| ||.+-..+-+|.|..+||..||.+.|- -.-|+|++....+ ..-++-..|.+|++. -.+..
T Consensus 39 l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPnv~~~~G--~i~~cL~~l~~W~p~--~~i~~ 112 (138)
T 1jat_B 39 MTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFI--SKINLPCVNPTTG--EVQTDFHTLRDWKRA--YTMET 112 (138)
T ss_dssp CCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEES--BCCCCTTBCTTTC--BBCTTSHHHHTCCTT--CCHHH
T ss_pred ceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEE--cccccCCEeCCCC--EEeeecccCCCCCCc--CcHHH
Confidence 45666655 699999999999999999999999996 4679997653222 221111445699986 35666
Q ss_pred HHHHHHHHHH
Q 016870 114 LIWELRDQYM 123 (381)
Q Consensus 114 li~EL~~~Y~ 123 (381)
++..|+.+..
T Consensus 113 vl~~i~~ll~ 122 (138)
T 1jat_B 113 LLLDLRKEMA 122 (138)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 6666655543
No 55
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.46 E-value=4.2 Score=33.40 Aligned_cols=57 Identities=19% Similarity=0.197 Sum_probs=37.9
Q ss_pred HHHHHHhhhcCCCccccccccceEeeeeee------CcceEEEEEeecCCCCCCCCeEEEEee
Q 016870 267 RFIEALAPLFGRPIETDSVFYRKSMFFVAS------GAFSFLVLFFLSTQFPKQQPSLMLQSS 323 (381)
Q Consensus 267 efIaaL~~~fG~~LEyDa~~f~k~slL~~~------~~F~flvHi~Lp~~FP~~qP~ltlQS~ 323 (381)
+=|+||.+.||..++--...-+...+-+.. ....+.+||.+|..||...|.+++.+.
T Consensus 17 ~EleaL~sIy~d~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~ 79 (128)
T 2ebm_A 17 NELEALESIYPDSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQ 79 (128)
T ss_dssp HHHHHHHHHCSSSEEECCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEEE
T ss_pred HHHHHHHHHccCceEEccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEcC
Confidence 347888888986543222111233333321 235789999999999999999999775
No 56
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=89.21 E-value=3.1 Score=37.01 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...+.-|..+-+..|.+.-.. ..+...+.+.| ||.+...+-+|.|..+||..||-+.|- -.-|||+
T Consensus 12 L~kEl~~l~~~~~~gi~~~~~~-----~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 84 (183)
T 3rz3_A 12 LLLELKGLQEEPVEGFRVTLVD-----EGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFL--TKMWHPN 84 (183)
T ss_dssp HHHHHHHHHHSCCTTEEEEECT-----TCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES--SCCCCTT
T ss_pred HHHHHHHHHhCCCCCEEEEecC-----ccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEec--CCCccCC
Confidence 4555666666666556654221 12256777777 599999999999999999999999996 5679997
Q ss_pred CC
Q 016870 84 YN 85 (381)
Q Consensus 84 ~~ 85 (381)
+.
T Consensus 85 V~ 86 (183)
T 3rz3_A 85 IY 86 (183)
T ss_dssp BC
T ss_pred CC
Confidence 64
No 57
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=89.13 E-value=0.84 Score=39.97 Aligned_cols=68 Identities=15% Similarity=0.350 Sum_probs=48.0
Q ss_pred cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhcccCCCCCcchHHHHHHHHHHH
Q 016870 48 PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQ 121 (381)
Q Consensus 48 Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL~~Wd~~dp~~Ll~li~EL~~~ 121 (381)
||.+-..+-+|.|..+||..||.+.|- -.-|+|++.. ++.....-+ ..|.+|++. -.+..++..|+.+
T Consensus 68 pYegG~f~l~i~fp~~YP~~PP~v~F~--t~i~HPNV~~-~G~icisCL-~iL~~WsP~--~ti~~vL~sI~~l 135 (156)
T 2q0v_A 68 VFENRIYSLTIFCDDNYPDSPPTVKFD--TKIEMSCVDN-CGRVIKNNL-HILKNWNRN--YTIETILISLRQE 135 (156)
T ss_dssp TTTTCEEEEEEECCTTTTTSCCEEEES--BCCCCTTBCT-TSBBCGGGS-HHHHTCCTT--CCHHHHHHHHHHH
T ss_pred CcCCcEEEEEEECCCcCCCCCCeEEEE--cccccCCCcc-CCeEehhhc-ccccCCCCc--CcHHHHHHHHHHH
Confidence 598989999999999999999999996 5679997642 222221111 456789986 3566666555443
No 58
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=88.57 E-value=5.1 Score=34.25 Aligned_cols=98 Identities=18% Similarity=0.319 Sum_probs=60.0
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|..-+.-|..+.+..|.+.-. + ......++..| ||.|-..+-+|.|-.+||..||-+.|- -.-|+|+
T Consensus 6 L~~El~~l~~~~~~~i~~~~~--~---~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 78 (149)
T 1fxt_A 6 IMKEIQAVKDDPAAHITLEFV--S---ESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFD--TKVYHPN 78 (149)
T ss_dssp HHHHHHHHHHCGGGCCEEEES--S---SSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEES--SCCCBTT
T ss_pred HHHHHHHHHhCCCCCEEEEEC--C---CCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEe--CCCccCC
Confidence 334455555544444444321 1 11245666665 499999999999999999999999996 5689997
Q ss_pred CCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~ 120 (381)
+...++..-. ..| .+|++. -.+..++..|+.
T Consensus 79 i~~~~G~iCl----~iL~~~W~p~--~~i~~vl~~i~~ 110 (149)
T 1fxt_A 79 ISSVTGAICL----DILKNAWSPV--ITLKSALISLQA 110 (149)
T ss_dssp BCSSSCCBCC----HHHHTSCCTT--CCHHHHHHHHHH
T ss_pred CcCCCCeEeC----CcCCCCCCCC--CcHHHHHHHHHH
Confidence 6532332222 223 369986 345555554443
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=88.56 E-value=2 Score=35.94 Aligned_cols=62 Identities=11% Similarity=0.130 Sum_probs=41.5
Q ss_pred HHHHHHHHHhhhcCCCccc-ccc-------ccceEeeeeee-----CcceEEEEEeecCCCCCCCCeEEEEeeee
Q 016870 264 VRRRFIEALAPLFGRPIET-DSV-------FYRKSMFFVAS-----GAFSFLVLFFLSTQFPKQQPSLMLQSSMY 325 (381)
Q Consensus 264 ~RrefIaaL~~~fG~~LEy-Da~-------~f~k~slL~~~-----~~F~flvHi~Lp~~FP~~qP~ltlQS~yH 325 (381)
.+.+=++||.+.||..++- +.. .-+...+-+.. ....+.++|.+|..||...|.|.+.++.+
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~~~~ 88 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDKEPVESSITLHFAMTPMYPYTAPEIEFKNVQN 88 (138)
T ss_dssp HHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSCSSCCCEEEEEEECCSSTTSSCCEEEEECCCS
T ss_pred HHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCCCCCceEEEEEEECCCCCCCCCCeEEEecCCC
Confidence 3445588999999876332 221 11223333222 14688999999999999999999988744
No 60
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=88.22 E-value=0.98 Score=39.88 Aligned_cols=75 Identities=29% Similarity=0.399 Sum_probs=50.5
Q ss_pred ceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhcccCCCCCcchHHHH
Q 016870 41 DRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLAL 114 (381)
Q Consensus 41 DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL~~Wd~~dp~~Ll~l 114 (381)
..+...| ||.+-..+-+|.|..+||..||.+.|- -.-|+|++...++..-..-+ ..+.+|.+. -.+..+
T Consensus 59 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~--T~i~HPNV~~~~G~ICl~iL-~~~~~WsP~--~ti~~v 133 (160)
T 2a4d_A 59 TRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV--TKINMNGVNSSNGVVDPRAI-SVLAKWQNS--YSIKVV 133 (160)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--BCCCCTTBCTTTCBBCGGGS-HHHHTCCTT--CCHHHH
T ss_pred eeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEe--cCceeCCEECCCCEEehhhc-CCccCCCcc--CcHHHH
Confidence 3555554 588889999999999999999999996 56699976522332222222 233689986 345555
Q ss_pred HHHHHH
Q 016870 115 IWELRD 120 (381)
Q Consensus 115 i~EL~~ 120 (381)
+..|+.
T Consensus 134 L~sI~~ 139 (160)
T 2a4d_A 134 LQELRR 139 (160)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555544
No 61
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=87.97 E-value=7.1 Score=33.56 Aligned_cols=97 Identities=20% Similarity=0.329 Sum_probs=62.4
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc-----cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI-----PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFY 84 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I-----Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~ 84 (381)
|..-+.-|..+.+..|.+..... .....++..| ||.|-..+-+|.|..+||..||.+.|- -.-|+|++
T Consensus 9 L~kEl~~l~~~~~~~i~~~~~~~-----~~l~~w~~~I~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPnV 81 (155)
T 1wzv_A 9 VVKELEDLQKKPPPYLRNLSSDD-----ANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFT--TKIYHPNV 81 (155)
T ss_dssp HHHHHHHHHHSCCTTEEEEEECS-----SCTTEEEEEECCCSTTGGGEEEEEEEECCTTTTSSCCEEEES--SCCCBTTB
T ss_pred HHHHHHHHHhCCCCCEEEEecCC-----CchheEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCCcceee--CCCccCcC
Confidence 44555666666666676633221 1246666666 588888999999999999999999996 56799976
Q ss_pred CCCCCCCCchhhhhhc--ccCCCCCcchHHHHHHHHHH
Q 016870 85 NESGGEGDSRSIKNSL--ATWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 85 ~~~~~~~~~~~~~~sL--~~Wd~~dp~~Ll~li~EL~~ 120 (381)
.. ++..-. ..| .+|++.- .+..++..|+.
T Consensus 82 ~~-~G~iCl----~iL~~~~W~p~~--~i~~vl~~i~~ 112 (155)
T 1wzv_A 82 DE-NGQICL----PIISSENWKPCT--KTCQVLEALNV 112 (155)
T ss_dssp CT-TCBCCC----GGGCTTTCCTTC--CHHHHHHHHHH
T ss_pred CC-CCeEee----cCCCccCCCCCC--cHHHHHHHHHH
Confidence 53 221111 344 6799853 34444444443
No 62
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=87.87 E-value=6.7 Score=33.95 Aligned_cols=95 Identities=20% Similarity=0.401 Sum_probs=61.2
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...+.-|..+-+..|.+.- .+ .....++..| ||.+...+-+|.|..+||..||.+.|- -.-|+|+
T Consensus 18 L~kEl~~l~~~~~~gi~~~~--~~----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 89 (158)
T 1zdn_A 18 VYKEVTTLTADPPDGIKVFP--NE----EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFL--TKIFHPN 89 (158)
T ss_dssp HHHHHHHHHHSCCTTEEEEE--CS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCCTT
T ss_pred HHHHHHHHHhCCCCCEEEEE--CC----CChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEec--cCcccCC
Confidence 44555666666666676653 11 1245565555 688889999999999999999999996 5689997
Q ss_pred CCCCCCCCCchhhh-hhc-ccCCCCCcchHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIK-NSL-ATWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 84 ~~~~~~~~~~~~~~-~sL-~~Wd~~dp~~Ll~li~EL~~ 120 (381)
+.. ++ .+| ..| .+|.+. -.+..++..|+.
T Consensus 90 v~~-~G-----~iCl~iL~~~W~p~--~~i~~vL~~i~~ 120 (158)
T 1zdn_A 90 VGA-NG-----EICVNVLKRDWTAE--LGIRHVLLTIKC 120 (158)
T ss_dssp BCT-TS-----BBCHHHHTTTCCTT--CCHHHHHHHHHH
T ss_pred CCC-CC-----EEehhhcCCCCCCC--CcHHHHHHHHHH
Confidence 642 22 222 233 379985 344444444443
No 63
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=87.54 E-value=7.2 Score=34.36 Aligned_cols=96 Identities=17% Similarity=0.295 Sum_probs=61.3
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...+.-|..+-+..|.+.-. + .....+...| ||.+-..+-+|.|..+||..||.+.|- -.-|+|+
T Consensus 28 L~kEl~~l~~~~~~gi~~~p~--~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~--T~i~HPN 99 (169)
T 1yrv_A 28 LHRDFCDLKENNYKGITAKPV--S----EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFI--TIPFHPN 99 (169)
T ss_dssp HHHHHHHHHHHCCTTEEEEEC--S----TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEES--SCCCCTT
T ss_pred HHHHHHHHHhCCCCCEEEEEc--C----CccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceec--CCCccCc
Confidence 344455555555555555321 1 1256677776 699999999999999999999999996 5679997
Q ss_pred CCCCCCCCCchhhhhhc---ccCCCCCcchHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSL---ATWNNKDPTRLLALIWELR 119 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL---~~Wd~~dp~~Ll~li~EL~ 119 (381)
+.+.++..-. ..| .+|++. -.+..++..|+
T Consensus 100 I~~~~G~ICL----~iL~~~~~WsP~--~ti~~vL~sI~ 132 (169)
T 1yrv_A 100 VDPHTGQPCI----DFLDNPEKWNTN--YTLSSILLALQ 132 (169)
T ss_dssp BCTTTCCBCC----HHHHCGGGCCTT--CCHHHHHHHHH
T ss_pred ccCCCCeEee----hhhcCCcCCCCc--CCHHHHHHHHH
Confidence 7433332222 334 479985 34444444443
No 64
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=87.51 E-value=1 Score=40.08 Aligned_cols=69 Identities=28% Similarity=0.363 Sum_probs=47.8
Q ss_pred cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhcccCCCCCcchHHHHHHHHHHH
Q 016870 48 PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQ 121 (381)
Q Consensus 48 Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL~~Wd~~dp~~Ll~li~EL~~~ 121 (381)
||.+-..+-+|.|..+||..||.+.|. -.-|+|++...++..-..-+ ..+.+|++. -.+..++..|+.+
T Consensus 82 pYegG~f~l~i~fp~~YP~~PP~v~F~--T~i~HPNV~~~~G~ICl~iL-~~~~~WsP~--~ti~~vL~sI~~l 150 (170)
T 2hlw_A 82 IYENRIYSLKIECGPKYPEAPPFVRFV--TKINMNGVNSSNGVVDPRAI-SVLAKWQNS--YSIKVVLQELRRL 150 (170)
T ss_dssp TTSSCCBCEEEECCSSCTTSCCEEEEC--BCCCCSSBCSSSCBBCTTTC-HHHHTCCSS--CCHHHHHHHHHHH
T ss_pred CcCCcEEEEEEECCCCCCCCCCeeEEe--cccccCCEeCCCCEEEhhhc-CCCCCCCcc--CcHHHHHHHHHHH
Confidence 588989999999999999999999996 46799976533332222222 334789986 3455555555443
No 65
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=87.11 E-value=7.6 Score=33.63 Aligned_cols=69 Identities=17% Similarity=0.259 Sum_probs=49.2
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...+.-|..+-+..|.+.-... .....++..| ||.+...+-+|.|..+||..||.+.|- -.-|+|+
T Consensus 8 L~kEl~~l~~~~~~gi~~~~~~~-----~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPN 80 (164)
T 3h8k_A 8 LMAEYKQLTLNPPEGIVAGPMNE-----ENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFT--CEMFHPN 80 (164)
T ss_dssp HHHHHHHHHHSCCTTEEEEESST-----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC--SCCCCTT
T ss_pred HHHHHHHHHhCCCCCEEEEECCC-----CCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEc--CCCccCC
Confidence 34455556666555666642211 1245666666 599999999999999999999999996 5689997
Q ss_pred CC
Q 016870 84 YN 85 (381)
Q Consensus 84 ~~ 85 (381)
+.
T Consensus 81 V~ 82 (164)
T 3h8k_A 81 IY 82 (164)
T ss_dssp BC
T ss_pred CC
Confidence 64
No 66
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=86.93 E-value=6.7 Score=33.89 Aligned_cols=102 Identities=17% Similarity=0.245 Sum_probs=60.5
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|.+-++-+..+.+..|.+.-....+ ...........| ||.|-..+-+|.|..+||..||-+.|. -.-|+|+
T Consensus 9 L~kE~~~l~~~~~~g~~~~p~~~~~-~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 85 (157)
T 2gjd_A 9 LQEERKKWRKDHPFGFYAKPVKKAD-GSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP--AGFYHPN 85 (157)
T ss_dssp HHHHHHHHHHCCCTTCEEEEEECTT-SCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC--TTCCCTT
T ss_pred HHHHHHHHHhCCCCCEEEEeccccC-CCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc--CCCccCC
Confidence 3444555666655555554322211 111233334444 688889999999999999999999996 5679997
Q ss_pred CCCCCCCCCchhhhhhcc---cCCCCCcchHHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSLA---TWNNKDPTRLLALIWELRDQ 121 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL~---~Wd~~dp~~Ll~li~EL~~~ 121 (381)
+. .++..-. ..|. +|++. -.+..++..|+.+
T Consensus 86 v~-~~G~iCl----~iL~~~~~W~p~--~~i~~vl~~i~~l 119 (157)
T 2gjd_A 86 VY-PSGTICL----SILNEDQDWRPA--ITLKQIVLGVQDL 119 (157)
T ss_dssp BC-TTSBBCC----GGGCTTTTCCTT--CCHHHHHHHHHHH
T ss_pred CC-CCCcEee----ecccCCCCCCCC--CcHHHHHHHHHHH
Confidence 64 2221111 3444 49986 3455555554433
No 67
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=86.83 E-value=3.7 Score=35.03 Aligned_cols=98 Identities=15% Similarity=0.298 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCC--
Q 016870 9 FISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDF-- 80 (381)
Q Consensus 9 ~i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F-- 80 (381)
-|.+.++-|..+-+..|.|.- .. +......+++.| ||.+...+-+|.|..+||..||.+.|- -.-|
T Consensus 26 RL~kEl~~l~~~~~~gi~v~~---~~-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~--T~i~~~ 99 (136)
T 2a7l_A 26 RLQKELLALQNDPPPGMTLNE---KS-VQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFT--GENIPV 99 (136)
T ss_dssp HHHHHHHHHHHSCCTTCCCCT---TC-CCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEE--SSCCCC
T ss_pred HHHHHHHHHHhCCCCCEEEEE---ee-CccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEe--CCCcCC
Confidence 345556666555544444320 00 122356666666 799999999999999999999999996 4456
Q ss_pred cCCCCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHH
Q 016870 81 HPFYNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELR 119 (381)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~ 119 (381)
+|++.. ++..-. ..| .+|++.- .+..++..|+
T Consensus 100 HPNV~~-~G~ICL----~iL~~~WsP~~--ti~~vL~sI~ 132 (136)
T 2a7l_A 100 HPHVYS-NGHICL----SILTEDWSPAL--SVQSVCLSII 132 (136)
T ss_dssp BTTBCT-TCBBCC----GGGTTTCCTTS--CHHHHHHHHH
T ss_pred CccCCC-CCeEEc----hhcCCCCCCCC--cHHHHHHHHH
Confidence 997642 322222 223 5799853 3555554444
No 68
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=86.81 E-value=9.2 Score=32.92 Aligned_cols=96 Identities=17% Similarity=0.319 Sum_probs=60.5
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...+.-|..+-+..|.+.- .++ ....+...| ||.|...+-+|.|-.+||..||-+.|- -.-|+|+
T Consensus 14 L~kEl~~l~~~~~~~i~~~p--~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 85 (156)
T 2e2c_A 14 LQQELRTLLMSGDPGITAFP--DGD----NLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFT--TPCWHPN 85 (156)
T ss_dssp HHHHHHHHHHHCCTTEEEEE--SSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES--SCCCBTT
T ss_pred HHHHHHHHHhCCCCCEEEEE--CCC----CccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEe--CCcccCC
Confidence 44445556555555565532 111 245565555 599999999999999999999999996 5689997
Q ss_pred CCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~ 120 (381)
+.. ++..-. ..| .+|++. -.+..++..|+.
T Consensus 86 v~~-~G~iCl----~iL~~~W~p~--~~i~~vL~si~~ 116 (156)
T 2e2c_A 86 VDQ-SGNICL----DILKENWTAS--YDVRTILLSLQS 116 (156)
T ss_dssp BCT-TCBBCC----GGGTTTCCTT--CCHHHHHHHHHH
T ss_pred Ccc-CceEEC----ccccccCCCC--CcHHHHHHHHHH
Confidence 653 221111 233 359886 355555555443
No 69
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=86.68 E-value=9.6 Score=32.81 Aligned_cols=84 Identities=21% Similarity=0.373 Sum_probs=56.7
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...+.-|..+-+..|.+.-. + .....++..| ||.|-..+-+|.|..+||..||.+.|- -.-|||+
T Consensus 10 L~kEl~~l~~~~~~~i~~~~~--~----~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 81 (154)
T 2c2v_B 10 IIKETQRLLAEPVPGIKAEPD--E----SNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFM--TKIYHPN 81 (154)
T ss_dssp HHHHHHHHHHSCCTTEEEEEC--S----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC--SCCCCTT
T ss_pred HHHHHHHHHhCCCCCEEEEEC--C----CchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEee--cCcccCc
Confidence 455566666666666666431 1 1345666666 688889999999999999999999996 5679997
Q ss_pred CCCCCCCCCchhhhhhc-ccCCCC
Q 016870 84 YNESGGEGDSRSIKNSL-ATWNNK 106 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL-~~Wd~~ 106 (381)
+. .++..-. ..| .+|++.
T Consensus 82 v~-~~G~iCl----~iL~~~W~p~ 100 (154)
T 2c2v_B 82 VD-KLGRICL----DILKDKWSPA 100 (154)
T ss_dssp BC-TTCBBCC----HHHHTSCCTT
T ss_pred Cc-cCCeEEc----hhccCCCCCC
Confidence 64 2221111 223 689984
No 70
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=86.49 E-value=8 Score=33.56 Aligned_cols=102 Identities=14% Similarity=0.258 Sum_probs=60.1
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...++-|..+.+..|.+.-..... ...+...+...| ||.+-..+-+|.|..+||..||-+.|. -.-|+|+
T Consensus 12 L~kE~~~l~~~~~~g~~~~p~~~~~-~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 88 (161)
T 2grr_A 12 LAQERKAWRKDHPFGFVAVPTKNPD-GTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE--PPLFHPN 88 (161)
T ss_dssp HHHHHHHHHHSCCTTCEEEEEECTT-SCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES--SCCCSTT
T ss_pred HHHHHHHHHhCCCCCEEEEeccccC-CCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe--cCcccCC
Confidence 3444555665555555443321111 111233444444 699988999999999999999999996 5679997
Q ss_pred CCCCCCCCCchhhhhhcc---cCCCCCcchHHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSLA---TWNNKDPTRLLALIWELRDQ 121 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL~---~Wd~~dp~~Ll~li~EL~~~ 121 (381)
+. .++..-. ..|. +|++. -.+..++..|+.+
T Consensus 89 v~-~~G~iCl----~iL~~~~~W~p~--~~i~~vl~~i~~l 122 (161)
T 2grr_A 89 VY-PSGTVCL----SILEEDKDWRPA--ITIKQILLGIQEL 122 (161)
T ss_dssp BC-TTSBBCC----GGGCTTTTCCTT--CCHHHHHHHHHHH
T ss_pred CC-CCCeEee----hhcCCCCCcCCC--CcHHHHHHHHHHH
Confidence 65 2221111 3444 59986 2455555544433
No 71
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=86.40 E-value=12 Score=31.62 Aligned_cols=96 Identities=16% Similarity=0.285 Sum_probs=60.2
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCC-CCcC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDE-DFHP 82 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~-~F~p 82 (381)
|...+.-|..+.+..+.+.- .+ .....+...| ||.|-..+-+|.|-.+||..||.+.|- -. -|+|
T Consensus 25 L~kEl~~l~~~~~~~~~~~~--~~----~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~--t~i~~HP 96 (136)
T 2h2y_A 25 IQKELNNFLKNPPINCTIDV--HP----SNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFL--QKPPKHT 96 (136)
T ss_dssp HHHHHHHHHHSCCTTEEEEE--CT----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEEC--SSCCCCT
T ss_pred HHHHHHHHHhCCCCCeEEEe--cc----ccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEe--CCCCCCC
Confidence 44455556666555565542 11 2245666555 599999999999999999999999995 33 4999
Q ss_pred CCCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHH
Q 016870 83 FYNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~ 120 (381)
++.. ++..-. ..| .+|++. -.+..++..|+.
T Consensus 97 nv~~-~G~ICl----~iL~~~WsP~--~ti~~vL~si~s 128 (136)
T 2h2y_A 97 HVYS-NGDICL----SVLGDDYNPS--LSISGLILSIIS 128 (136)
T ss_dssp TBCT-TCCBCC----GGGTTTCCTT--CCHHHHHHHHHH
T ss_pred cCCC-CCEEEC----ccccCCCCCC--CcHHHHHHHHHH
Confidence 7642 332222 223 379885 245555544443
No 72
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=86.24 E-value=6.8 Score=33.73 Aligned_cols=97 Identities=16% Similarity=0.335 Sum_probs=62.3
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|..-++-|..+.+..|.+.-. + .....+...| ||.+...+-+|.|-.+||..||-+.|- -.-|+|+
T Consensus 10 L~kE~~~l~~~~~~~i~~~~~--~----~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 81 (155)
T 1jat_A 10 IIKETEKLVSDPVPGITAEPH--D----DNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFL--TKIYHPN 81 (155)
T ss_dssp HHHHHHHHHHSCCTTEEEEEE--T----TEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEEC--SCCCBTT
T ss_pred HHHHHHHHHhCCCCCEEEEEC--C----CchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceee--cccccCC
Confidence 444555566665666665431 1 1245666666 699999999999999999999999996 5689997
Q ss_pred CCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRDQ 121 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~~ 121 (381)
+. .++..-. ..| .+|++. -.+..++..|+.+
T Consensus 82 v~-~~G~iCl----~iL~~~W~p~--~~i~~vl~~i~~l 113 (155)
T 1jat_A 82 ID-RLGRICL----DVLKTNWSPA--LQIRTVLLSIQAL 113 (155)
T ss_dssp BC-TTCCBCC----GGGTTTCCTT--CCHHHHHHHHHHH
T ss_pred CC-CCCEEEc----hhhccCCCCC--CCHHHHHHHHHHH
Confidence 65 2222211 233 379985 3455555544433
No 73
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=86.01 E-value=8 Score=33.84 Aligned_cols=101 Identities=15% Similarity=0.193 Sum_probs=57.4
Q ss_pred HHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCC
Q 016870 12 AQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYN 85 (381)
Q Consensus 12 ~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~ 85 (381)
+-+.-|..+-+..|.+.-....+ ...+...+...| ||.+...+-+|.|..+||..||.+.|- -.-|+|++.
T Consensus 17 kEl~~l~~~~p~gi~~~p~~~~d-~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~--t~i~HPnV~ 93 (163)
T 3rcz_B 17 EERKQWRRDHPFGFYAKPCKSSD-GGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFT--PPLFHPNVY 93 (163)
T ss_dssp HHHHHHHHSCCTTCEEEEEECTT-SSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCSTTBC
T ss_pred HHHHHHHhCCCCCEEEEEccCcC-CCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEe--CCCccCCCC
Confidence 34444555555545443222211 111233344444 688888999999999999999999996 568999764
Q ss_pred CCCCCCCchhhhhhcccCCCCCcchHHHHHHHHH
Q 016870 86 ESGGEGDSRSIKNSLATWNNKDPTRLLALIWELR 119 (381)
Q Consensus 86 ~~~~~~~~~~~~~sL~~Wd~~dp~~Ll~li~EL~ 119 (381)
.++..-..-+ ..-.+|++.- .+..++..|+
T Consensus 94 -~~G~iCl~iL-~~~~~W~p~~--ti~~vL~~i~ 123 (163)
T 3rcz_B 94 -PSGTVCLSIL-NEEEGWKPAI--TIKQILLGIQ 123 (163)
T ss_dssp -TTSBBCCGGG-CTTTTCCTTC--CHHHHHHHHH
T ss_pred -CCCcEecccc-CCCCCcCCcC--cHHHHHHHHH
Confidence 2332222221 2223498862 4444444443
No 74
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=85.94 E-value=3.8 Score=35.25 Aligned_cols=73 Identities=26% Similarity=0.496 Sum_probs=51.3
Q ss_pred CceEEEEc-----cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhh-hhc--ccCCCCCcchH
Q 016870 40 LDRFTLLI-----PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIK-NSL--ATWNNKDPTRL 111 (381)
Q Consensus 40 ~DRF~L~I-----Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~-~sL--~~Wd~~dp~~L 111 (381)
...+...| ||.|...+-+|.|..+||..||-+.|. -.-|+|++.. ++ .+| ..| .+|++.- .+
T Consensus 32 l~~w~~~i~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPnv~~-~G-----~iCl~iL~~~~W~p~~--~i 101 (154)
T 1c4z_D 32 LLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFK--TKIYHPNIDE-KG-----QVCLPVISAENWKPAT--KT 101 (154)
T ss_dssp SSEEEEEECCCSSSCCSCCEEEEEECCTTTTTSCCEEEES--SCCCCTTBCT-TC-----BBCCTTTSSSSCCTTC--CH
T ss_pred hheEEEEEeCCCCCccCCeEEEEEEeCCCCCCCCCEEEEe--CCCccccCCC-CC-----EEECCCCCCCCCCCCC--cH
Confidence 45666666 599999999999999999999999996 5679997652 22 222 345 3799863 35
Q ss_pred HHHHHHHHHHH
Q 016870 112 LALIWELRDQY 122 (381)
Q Consensus 112 l~li~EL~~~Y 122 (381)
..++..|+.+.
T Consensus 102 ~~vl~~i~~ll 112 (154)
T 1c4z_D 102 DQVIQSLIALV 112 (154)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555554443
No 75
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=85.42 E-value=8.8 Score=32.82 Aligned_cols=96 Identities=20% Similarity=0.379 Sum_probs=60.8
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...+.-|..+.+..|.+.-. +. ....++..| ||.|-..+-+|.|..+||..||.+.|- -.-|+|+
T Consensus 6 L~kEl~~l~~~~~~~i~~~~~--~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 77 (149)
T 2r0j_A 6 ITKETQNLANEPPPGIMAVPV--PE----NYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFL--TKIYHPN 77 (149)
T ss_dssp HHHHHHHHHHSCCTTEEEEEE--TT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEEC--SCCCBTT
T ss_pred HHHHHHHHHhCCCCCEEEEEC--CC----cccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEec--cCCccCC
Confidence 445566666666666665431 11 245555555 599999999999999999999999996 5679997
Q ss_pred CCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~ 120 (381)
+.. ++..-. ..| .+|.+. -.+..++..|+.
T Consensus 78 v~~-~G~iCl----~iL~~~W~p~--~~i~~vl~~i~~ 108 (149)
T 2r0j_A 78 IDK-LGRICL----DILKDKWSPA--LQIRTVLLSIQA 108 (149)
T ss_dssp BCT-TCBBCC----GGGTTTCCTT--SCHHHHHHHHHH
T ss_pred CCC-CCEEec----hhcCCCCCCC--CcHHHHHHHHHH
Confidence 642 221111 233 379985 345444444443
No 76
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=85.38 E-value=11 Score=32.76 Aligned_cols=68 Identities=21% Similarity=0.353 Sum_probs=46.7
Q ss_pred HHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCC
Q 016870 11 SAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFY 84 (381)
Q Consensus 11 ~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~ 84 (381)
..-+.-|..+-+..|.+.-+.. .....+...| ||.|-..+-+|.|-.+||..||-+.|- -.-|+|++
T Consensus 10 ~kEl~~l~~~~~~gi~~~~~~~-----~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPNv 82 (165)
T 2ucz_A 10 LKELQQLIKDSPPGIVAGPKSE-----NNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFT--PSILHPNI 82 (165)
T ss_dssp HHHHHHHHHSCCTTEEEEESSS-----SCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCSCTTB
T ss_pred HHHHHHHHhCCCCCEEEEECCC-----CCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEe--CCCccCCC
Confidence 3444555555555565532111 1244555544 698999999999999999999999996 46799976
Q ss_pred C
Q 016870 85 N 85 (381)
Q Consensus 85 ~ 85 (381)
.
T Consensus 83 ~ 83 (165)
T 2ucz_A 83 Y 83 (165)
T ss_dssp C
T ss_pred C
Confidence 4
No 77
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=85.33 E-value=13 Score=32.45 Aligned_cols=67 Identities=27% Similarity=0.451 Sum_probs=47.0
Q ss_pred HHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCC
Q 016870 11 SAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFY 84 (381)
Q Consensus 11 ~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~ 84 (381)
..-+.-|..+.+..|.+.- .. .....++..| ||.+-..+-+|.|..+||..||.+.|- -.-|||++
T Consensus 10 ~kEl~~l~~~~~~gi~~~~--~~----~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPNv 81 (169)
T 1yh2_A 10 KRELHMLATEPPPGITCWQ--DK----DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFL--TPIYHPNI 81 (169)
T ss_dssp HHHHHHHHHSCCTTEEEEE--SS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES--SCCCBTTB
T ss_pred HHHHHHHHhCCCCCEEEEe--CC----CchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEee--cCCccccC
Confidence 3445556556555566542 11 1245555444 588999999999999999999999996 56799976
Q ss_pred C
Q 016870 85 N 85 (381)
Q Consensus 85 ~ 85 (381)
.
T Consensus 82 ~ 82 (169)
T 1yh2_A 82 D 82 (169)
T ss_dssp C
T ss_pred C
Confidence 5
No 78
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=85.29 E-value=7.8 Score=31.71 Aligned_cols=60 Identities=10% Similarity=0.213 Sum_probs=41.1
Q ss_pred HHHHHHHHHhhhcCCCcccccc----ccceEeeeeee--------CcceEEEEEeecCCCCCCCCeEEEEee
Q 016870 264 VRRRFIEALAPLFGRPIETDSV----FYRKSMFFVAS--------GAFSFLVLFFLSTQFPKQQPSLMLQSS 323 (381)
Q Consensus 264 ~RrefIaaL~~~fG~~LEyDa~----~f~k~slL~~~--------~~F~flvHi~Lp~~FP~~qP~ltlQS~ 323 (381)
.+.+=++||.+.||.-++.-.. .=+.+.+-+.. ....+.++|.+|..||...|.+.+.+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 3556688999999865443211 11334444421 136789999999999999999999875
No 79
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=85.29 E-value=13 Score=32.43 Aligned_cols=96 Identities=18% Similarity=0.366 Sum_probs=59.7
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|.+-++-|..+.+..|.+.-. + .....++..| ||.|-..+-+|.|..+||..||.+.|- -.-|+|+
T Consensus 24 L~kEl~~l~~~~~~gi~~~p~--~----~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~--T~i~HPn 95 (165)
T 2c4o_A 24 IHKELNDLARDPPAQCSAGPV--G----DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFT--TRIYHPN 95 (165)
T ss_dssp HHHHHHHHHSSCCTTEEEEES--S----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC--SCCCBTT
T ss_pred HHHHHHHHHhCCCCCEEEEEc--C----CCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEe--cCCcCCc
Confidence 334455566666666665421 1 1245555544 598989999999999999999999996 4679997
Q ss_pred CCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~ 120 (381)
+.. ++..-. ..| .+|++. -.+..++..|+.
T Consensus 96 V~~-~G~ICl----~iL~~~W~P~--~ti~~vL~si~~ 126 (165)
T 2c4o_A 96 INS-NGSICL----DILRSQWSPA--LTISKVLLSICS 126 (165)
T ss_dssp BCT-TCBBCC----GGGTTTCCTT--CCHHHHHHHHHH
T ss_pred CCC-CCeEee----hhhcCCCCCc--CcHHHHHHHHHH
Confidence 652 221111 233 379986 344444444443
No 80
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=84.87 E-value=2.7 Score=36.43 Aligned_cols=73 Identities=19% Similarity=0.352 Sum_probs=49.4
Q ss_pred CceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhcc-cCCCCCcchHH
Q 016870 40 LDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLA-TWNNKDPTRLL 112 (381)
Q Consensus 40 ~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL~-~Wd~~dp~~Ll 112 (381)
...++..| ||.+...+-+|.|-.+||..||-+.|- -.-|+|++...++..-. ..|. +|++. -.+.
T Consensus 40 l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPni~~~~G~iCl----~iL~~~W~p~--~~i~ 111 (159)
T 2bep_A 40 FTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI--TKIWHPNISSVTGAICL----DILKDQWAAA--MTLR 111 (159)
T ss_dssp SSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES--SCCCBTTBCTTTCBBCC----GGGTTTCCTT--CCHH
T ss_pred hheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEee--CCCCccCCCCCCCEEeC----hhhhccCCCC--CcHH
Confidence 56666666 599999999999999999999999996 46799976532222211 2333 49985 3344
Q ss_pred HHHHHHHH
Q 016870 113 ALIWELRD 120 (381)
Q Consensus 113 ~li~EL~~ 120 (381)
.++..|+.
T Consensus 112 ~vl~~i~~ 119 (159)
T 2bep_A 112 TVLLSLQA 119 (159)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 81
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=84.68 E-value=16 Score=31.31 Aligned_cols=94 Identities=19% Similarity=0.332 Sum_probs=59.3
Q ss_pred HHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCC
Q 016870 11 SAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFY 84 (381)
Q Consensus 11 ~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~ 84 (381)
..-++-+..+-+..|.+.-. +. ....+...| ||.|...+-+|.|..+||..||.+.|- -.-|+|++
T Consensus 10 ~kEl~~l~~~~~~~i~~~p~--~~----nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~--t~i~HPnv 81 (151)
T 4gpr_A 10 QKELREIQQDPPCNCSAGPV--GD----DIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFM--TKVYHPNI 81 (151)
T ss_dssp HHHHHHHHHSCCTTEEEEES--SS----CTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEES--SCCCBTTB
T ss_pred HHHHHHHHhCCCCCEEEEEc--CC----CceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEe--cCcccceE
Confidence 34455565555555665431 11 244555554 599999999999999999999999996 56899976
Q ss_pred CCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHH
Q 016870 85 NESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELR 119 (381)
Q Consensus 85 ~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~ 119 (381)
.. ++..-. ..| .+|++. -.+..++..|+
T Consensus 82 ~~-~G~iCl----~iL~~~W~p~--~~i~~vl~~i~ 110 (151)
T 4gpr_A 82 NK-NGVICL----DILKDQWSPA--LTLSRVLLSIS 110 (151)
T ss_dssp CT-TCBBCC----GGGTTTCCTT--CCHHHHHHHHH
T ss_pred CC-CCEEEc----ccccCCCCCC--CcHHHHHHHHH
Confidence 52 322222 223 689886 33444444443
No 82
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=84.61 E-value=13 Score=32.73 Aligned_cols=103 Identities=18% Similarity=0.272 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcC
Q 016870 9 FISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHP 82 (381)
Q Consensus 9 ~i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p 82 (381)
.|...+.-|..+-+..|.+.-+.. .....+...| ||.+-..+-+|.|..+||..||-+.|- -.-|+|
T Consensus 21 rL~kEl~~l~~~~~~gi~~~p~~~-----~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~--T~i~HP 93 (172)
T 2awf_A 21 LLRRQLAELNKNPVEGFSAGLIDD-----NDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFI--TEIWHP 93 (172)
T ss_dssp HHHHHHHHHHHSCCTTEEEEESST-----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC--SCCCCT
T ss_pred HHHHHHHHHHhCCCCCEEEEECCC-----ccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCccccc--CCCccC
Confidence 345556666666666666543211 1234555444 588889999999999999999999996 457999
Q ss_pred CCCCCCCCCCchhhhh----------hcccCCCCCcchHHHHHHHHHHH
Q 016870 83 FYNESGGEGDSRSIKN----------SLATWNNKDPTRLLALIWELRDQ 121 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~----------sL~~Wd~~dp~~Ll~li~EL~~~ 121 (381)
++.. ++..-..-+.+ ...+|++. -.+..++..|+.+
T Consensus 94 NV~~-~G~IClsiL~~~~~d~~~~~~~~~~WsP~--~ti~~vL~sI~sl 139 (172)
T 2awf_A 94 NVDK-NGDVCISILHEPGEDKYGYEKPEERWLPI--HTVETIMISVISM 139 (172)
T ss_dssp TBCT-TCBBCCGGGSCC---------CTTSCCTT--CCHHHHHHHHHHH
T ss_pred CCCC-CCcEehhhcCCcccccccccccCCCCCCc--CcHHHHHHHHHHH
Confidence 7642 22222211100 11468885 3566666655544
No 83
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=84.49 E-value=14 Score=33.37 Aligned_cols=94 Identities=16% Similarity=0.277 Sum_probs=58.7
Q ss_pred HHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCC
Q 016870 11 SAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFY 84 (381)
Q Consensus 11 ~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~ 84 (381)
..-+.-|..+-+..|.+.-. + .....+...| ||.|-..+-+|.|..+||..||.+.|. -.-|+|++
T Consensus 54 ~kEl~~l~~~~~~gi~~~p~--~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~--T~i~HPNV 125 (194)
T 3bzh_A 54 QKELADITLDPPPNCSAGPK--G----DNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFR--TRIYHCNI 125 (194)
T ss_dssp HHHHHHHHHSCCTTEEEEES--S----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCBTTB
T ss_pred HHHHHHHHhCCCCCceeecc--c----CccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCcccccc--CCCccceE
Confidence 33445555555555655421 1 1245666555 699999999999999999999999996 57899976
Q ss_pred CCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHH
Q 016870 85 NESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELR 119 (381)
Q Consensus 85 ~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~ 119 (381)
.. ++..-. ..| .+|.+. -.+..++..|+
T Consensus 126 ~~-~G~ICL----~iL~~~WsP~--~ti~~vL~sI~ 154 (194)
T 3bzh_A 126 NS-QGVICL----DILKDNWSPA--LTISKVLLSIC 154 (194)
T ss_dssp CT-TCBBCC----GGGTTTCCTT--CCHHHHHHHHH
T ss_pred CC-CCceec----hhhhccCCCc--CcHHHHHHHHH
Confidence 52 221111 223 369885 23444444433
No 84
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=84.35 E-value=10 Score=34.78 Aligned_cols=85 Identities=18% Similarity=0.326 Sum_probs=56.0
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...+.-|..+-+..|.+.-. + .....++..| ||.+-..+-+|.|-.+||..||-+.|- -.=|+|+
T Consensus 28 L~kEl~~l~~~~~~gi~~~p~--~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~--T~i~HPN 99 (216)
T 2pwq_A 28 LQKELKDIENENVQEIDAHIK--D----SNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFV--TKIWHPN 99 (216)
T ss_dssp HHHHHHHHHHSCTTTEEEEEC--S----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES--SCCCBTT
T ss_pred HHHHHHHHHhCCCCCEEEEEc--C----CccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCccccc--CCCcCCC
Confidence 344455566665555665431 1 1256677666 699999999999999999999999996 5679997
Q ss_pred CCCCCCCCCchhhhhhcc-cCCCC
Q 016870 84 YNESGGEGDSRSIKNSLA-TWNNK 106 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL~-~Wd~~ 106 (381)
+...++..-. ..|. +|.+.
T Consensus 100 I~~~~G~ICL----~iL~~~WsP~ 119 (216)
T 2pwq_A 100 ISSQTGAICL----DVLKNEWSPA 119 (216)
T ss_dssp BCTTTCBBCC----HHHHHHCCTT
T ss_pred CcCCCCEEEc----hhhcccCCCC
Confidence 6532222222 2333 59885
No 85
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=84.25 E-value=16 Score=32.05 Aligned_cols=96 Identities=18% Similarity=0.374 Sum_probs=61.0
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|..-+.-|..+.+..|.+.- .+ .....++..| ||.+-..+-+|.|..+||..||.+.|- -.-|+|+
T Consensus 26 L~kEl~~l~~~~~~gi~~~~--~~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~--T~i~HPN 97 (166)
T 2ayv_A 26 INKELNDLSKDPPTNCSAGP--VG----DDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFT--TKIYHPN 97 (166)
T ss_dssp HHHHHHHHHHSCCTTEEEEE--CS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC--SCCCBTT
T ss_pred HHHHHHHHHhCCCCCEEEEE--cC----CCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeec--cCCcCCc
Confidence 44455556666666666543 11 1245565555 599999999999999999999999996 5679997
Q ss_pred CCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~ 120 (381)
+.. ++..-. ..| .+|.+. -.+..++..|+.
T Consensus 98 I~~-~G~ICL----~iL~~~WsP~--~ti~~vL~sI~s 128 (166)
T 2ayv_A 98 INS-QGAICL----DILKDQWSPA--LTISKVLLSISS 128 (166)
T ss_dssp BCT-TCBBCC----GGGTTTCCTT--CCHHHHHHHHHH
T ss_pred CCC-CCeEEc----ccccccCCCC--CcHHHHHHHHHH
Confidence 642 222211 233 379986 244444444443
No 86
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=83.97 E-value=9 Score=33.31 Aligned_cols=69 Identities=16% Similarity=0.264 Sum_probs=48.6
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc-----cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI-----PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFY 84 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I-----Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~ 84 (381)
|...|+-|..+-+..|.+.-. .+ .....+.+.| ||.+...+-+|.|..+||..||-+.|. -.-|+|++
T Consensus 19 L~kEl~~l~~~~~~gi~~~~~-~~----~~l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~--t~i~HPnv 91 (167)
T 3fn1_B 19 LVKEVAELEANLPCTCKVHFP-DP----NKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCL--TKIWHPNI 91 (167)
T ss_dssp HHHHHHHHGGGSCTTEEEECS-SS----SCTTEEEEEECCSSSTTTTCCEEEEEECCTTBTTBCCEEEEC--SCCCCSSB
T ss_pred HHHHHHHHHhCCCCCEEEEeC-CC----CcceeEEEEECCCCCccCCCEEEEEEECCCCCCCCCCeeEec--CCcccCCC
Confidence 444555566665555655421 11 1245566655 688999999999999999999999996 56899976
Q ss_pred C
Q 016870 85 N 85 (381)
Q Consensus 85 ~ 85 (381)
.
T Consensus 92 ~ 92 (167)
T 3fn1_B 92 T 92 (167)
T ss_dssp C
T ss_pred C
Confidence 4
No 87
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=83.61 E-value=10 Score=32.45 Aligned_cols=96 Identities=17% Similarity=0.324 Sum_probs=59.0
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|.+-+.-|..+.+..|.+.-. ++ ....+...| ||.|...+-+|.|..+||..||.+.|. -.-|+|+
T Consensus 9 L~~E~~~l~~~~~~~i~~~~~--~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 80 (152)
T 2aak_A 9 LMRDFKRLQQDPPAGISGAPQ--DN----NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFV--SRMFHPN 80 (152)
T ss_dssp HHHHHHHHHHSCCTTEEEEEE--TT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCCTT
T ss_pred HHHHHHHHHhCCCCCEEEEeC--CC----CccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEe--cCcccCC
Confidence 344455566665555665321 11 134444443 588889999999999999999999996 5689997
Q ss_pred CCCCCCCCCchhhhhhcc-cCCCCCcchHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSLA-TWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL~-~Wd~~dp~~Ll~li~EL~~ 120 (381)
+.. ++..-. ..|. +|++.- .+..++..|+.
T Consensus 81 v~~-~G~iCl----~iL~~~W~p~~--~i~~vl~~i~~ 111 (152)
T 2aak_A 81 IYA-DGSICL----DILQNQWSPIY--DVAAILTSIQS 111 (152)
T ss_dssp BCT-TSBBCC----GGGTTSCCTTC--CHHHHHHHHHH
T ss_pred CCC-CCEEec----hhhcCCCCCCC--cHHHHHHHHHH
Confidence 653 222211 3343 699852 34444444443
No 88
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=83.15 E-value=13 Score=31.62 Aligned_cols=96 Identities=19% Similarity=0.359 Sum_probs=59.7
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|..-++-|..+.+..|.+.-. + .....+...| ||.|...+-+|.|..+||..||.+.|. -.-|+|+
T Consensus 9 L~kEl~~l~~~~~~~~~~~~~--~----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPn 80 (150)
T 1z2u_A 9 IQKELQDLGRDPPAQCSAGPV--G----DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFT--TRIYHPN 80 (150)
T ss_dssp HHHHHHHHHHSCCSSEEEEEE--T----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES--SCCCBTT
T ss_pred HHHHHHHHHhCCCCCEEEEEC--C----CcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEe--cCcccCc
Confidence 344455566666656665421 1 1244555554 499999999999999999999999996 4579997
Q ss_pred CCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRD 120 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~ 120 (381)
+.. ++..-. ..| .+|++. -.+..++..|+.
T Consensus 81 v~~-~G~iCl----~iL~~~W~p~--~~i~~vl~~i~~ 111 (150)
T 1z2u_A 81 INS-NGSICL----DILRSQWSPA--LTISKVLLSICS 111 (150)
T ss_dssp BCT-TCBBCC----GGGTTTCCTT--CCHHHHHHHHHH
T ss_pred CCC-CCeEee----ccccCCCCCC--CCHHHHHHHHHH
Confidence 642 221111 233 379986 345444444443
No 89
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=81.91 E-value=3.9 Score=36.82 Aligned_cols=71 Identities=20% Similarity=0.357 Sum_probs=49.2
Q ss_pred CceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhc-ccCCCCCcchHH
Q 016870 40 LDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL-ATWNNKDPTRLL 112 (381)
Q Consensus 40 ~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll 112 (381)
...+...| ||.+...+-+|.|..+||..||-+.|- -.-|||++...++..-. ..| .+|.+. -.+.
T Consensus 37 l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~--t~i~HPnv~~~~G~iCl----~iL~~~W~p~--~~i~ 108 (201)
T 3k9o_A 37 FTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI--TKIWHPNISSVTGAICL----DILKDQWAAA--MTLR 108 (201)
T ss_dssp SSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCBTTBCTTTCBBCC----GGGTTTCCTT--CCHH
T ss_pred ccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccc--cCcccCCCcCCCCeeeC----cccccCCCCC--CCHH
Confidence 56666666 699999999999999999999999996 56799976532332222 223 579885 3344
Q ss_pred HHHHHH
Q 016870 113 ALIWEL 118 (381)
Q Consensus 113 ~li~EL 118 (381)
.++..|
T Consensus 109 ~vL~~i 114 (201)
T 3k9o_A 109 TVLLSL 114 (201)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 90
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=81.30 E-value=5.2 Score=33.12 Aligned_cols=62 Identities=10% Similarity=0.128 Sum_probs=39.8
Q ss_pred HHHHHHHHHhhhcCCCccc-cccc------cceEeeeeee-----C--cceEEEEEeecCCCCCCCCeEEEEeeee
Q 016870 264 VRRRFIEALAPLFGRPIET-DSVF------YRKSMFFVAS-----G--AFSFLVLFFLSTQFPKQQPSLMLQSSMY 325 (381)
Q Consensus 264 ~RrefIaaL~~~fG~~LEy-Da~~------f~k~slL~~~-----~--~F~flvHi~Lp~~FP~~qP~ltlQS~yH 325 (381)
.+.+=++||.+.||.-++- +... -+...+-+.. . ...+.++|.+|..||...|.|++.++-.
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~~~ 89 (137)
T 1ukx_A 14 RQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKG 89 (137)
T ss_dssp HHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEECCTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEEEES
T ss_pred HHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEecCCcCCcccceEEEEEEECCCCCCCCCCcEEEecCCC
Confidence 3444588999999875332 2110 1222333321 1 2678999999999999999999976633
No 91
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=80.75 E-value=4.1 Score=36.64 Aligned_cols=53 Identities=21% Similarity=0.470 Sum_probs=39.5
Q ss_pred cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhcccCCCC
Q 016870 48 PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNK 106 (381)
Q Consensus 48 Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL~~Wd~~ 106 (381)
||.+...+-+|.|..+||..||-+.|- -.-|+|++.. ++..-..-+ . .+|++.
T Consensus 76 pyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPnV~~-~G~iCl~iL-~--~~W~p~ 128 (190)
T 3o2u_A 76 YYNYGSINFNLDFNEVYPIEPPKVVCL--KKIFHPNIDL-KGNVCLNIL-R--EDWSPA 128 (190)
T ss_dssp TTTTCCEEEEEECCTTTTTSCCEEEEC--SCCCCTTBCT-TSBBCCGGG-T--TTCCTT
T ss_pred CCCCCEEEEEEECCCCCCCCCceeEEe--cCcccCCCCC-CCeEechhc-c--CCCCCC
Confidence 588889999999999999999999996 5679997652 332222222 1 679884
No 92
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=79.66 E-value=5.1 Score=35.02 Aligned_cols=74 Identities=19% Similarity=0.438 Sum_probs=50.2
Q ss_pred CceEEEEc------ccc--CCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhcccCCCCC-cch
Q 016870 40 LDRFTLLI------PYC--LDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKD-PTR 110 (381)
Q Consensus 40 ~DRF~L~I------Pyc--~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL~~Wd~~d-p~~ 110 (381)
...+.+.| ||. +...+-+|.|..+||..||-+.|- -.-|+|++. .++..-..-+ . .+|++.- -..
T Consensus 49 l~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~--t~i~HPnv~-~~G~iCl~il-~--~~W~p~~~i~~ 122 (167)
T 4ds2_A 49 IYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFV--TPVYSPLVT-GEGGICDRMV-N--DFWTPDQHASD 122 (167)
T ss_dssp TTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEES--SCCCCSSCC-TTSCCCTHHH-H--TTCCTTSCHHH
T ss_pred ccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEe--CCcccccCC-CCCEEEcccC-c--CCCCCCCChHH
Confidence 45555555 688 889999999999999999999996 567999765 3332333222 1 6899853 343
Q ss_pred -HHHHHHHHH
Q 016870 111 -LLALIWELR 119 (381)
Q Consensus 111 -Ll~li~EL~ 119 (381)
|+.+++.|.
T Consensus 123 vll~~l~~l~ 132 (167)
T 4ds2_A 123 VIKLVLDRVF 132 (167)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 445555444
No 93
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=79.62 E-value=4.7 Score=38.06 Aligned_cols=71 Identities=20% Similarity=0.357 Sum_probs=49.6
Q ss_pred CceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhc-ccCCCCCcchHH
Q 016870 40 LDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL-ATWNNKDPTRLL 112 (381)
Q Consensus 40 ~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll 112 (381)
...+...| ||.+...+-+|.|..+||..||.+.|- -.=|+|++...++..-. ..| .+|.+. -.+.
T Consensus 89 l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~--T~i~HPNV~~~~G~ICL----~iL~~~WsP~--~ti~ 160 (253)
T 3e46_A 89 FTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI--TKIWHPNISSVTGAICL----DILKDQWAAA--MTLR 160 (253)
T ss_dssp SSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES--SCCCBTTBCTTTCBBCC----GGGTTCCCTT--CCHH
T ss_pred ccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeec--CCCccCCccCCCCeeec----ccccCCCCCC--CCHH
Confidence 56677666 699999999999999999999999996 56799976532332222 223 579885 3344
Q ss_pred HHHHHH
Q 016870 113 ALIWEL 118 (381)
Q Consensus 113 ~li~EL 118 (381)
.++..|
T Consensus 161 ~vL~sI 166 (253)
T 3e46_A 161 TVLLSL 166 (253)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 94
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=78.45 E-value=4.2 Score=35.84 Aligned_cols=72 Identities=24% Similarity=0.392 Sum_probs=49.2
Q ss_pred CceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCC-CCCcCCCCCCCCCCCchhhh-hhc--ccCCCCCcc
Q 016870 40 LDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPED-EDFHPFYNESGGEGDSRSIK-NSL--ATWNNKDPT 109 (381)
Q Consensus 40 ~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD-~~F~p~~~~~~~~~~~~~~~-~sL--~~Wd~~dp~ 109 (381)
...++..| ||.+-..+-+|.|..+||..||-+.|- - .=|||++...++ .+| ..| .+|.+.-
T Consensus 47 l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~~i~HPni~~~~G-----~iCl~iL~~~~W~p~~-- 117 (172)
T 2y9m_A 47 LSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFM--QNNILHCNVKSATG-----EICLNILKPEEWTPVW-- 117 (172)
T ss_dssp TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEEC--TTSCCCTTEETTTT-----EECCGGGSTTTCCTTC--
T ss_pred hhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEe--eCCeecCCCcCCCC-----EEeccccCCCCCCCcC--
Confidence 45565554 599999999999999999999999996 3 569997643322 222 344 3799853
Q ss_pred hHHHHHHHHHH
Q 016870 110 RLLALIWELRD 120 (381)
Q Consensus 110 ~Ll~li~EL~~ 120 (381)
.+..++..|+.
T Consensus 118 ~i~~vL~si~~ 128 (172)
T 2y9m_A 118 DLLHCVHAVWR 128 (172)
T ss_dssp CHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 45555544443
No 95
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=78.26 E-value=5.3 Score=34.08 Aligned_cols=26 Identities=19% Similarity=0.414 Sum_probs=23.5
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEeee
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQSSM 324 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS~y 324 (381)
..+.++|.+|..||...|.|++.+..
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~~ 98 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSVL 98 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECTT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEccc
Confidence 47899999999999999999999863
No 96
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=77.92 E-value=16 Score=33.46 Aligned_cols=96 Identities=19% Similarity=0.313 Sum_probs=58.0
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|..-+.-|..+.+..|.+.-. +....+.++..| ||.|-..+-+|.|-.+||..||-+.|- -.-|||+
T Consensus 7 L~kEl~~l~~~~~~gi~~~p~-----~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~--T~i~HPN 79 (215)
T 1tte_A 7 IMKEIQAVKDDPAAHITLEFV-----SESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFD--TKVYHPN 79 (215)
T ss_dssp HHHHHHHHHTTTCTTCEECCC-----SSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEET--TTCCCSS
T ss_pred HHHHHHHHHhCCCCCEEEEEC-----CCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCccccc--CCCccCc
Confidence 334455555554444444321 111235666665 598889999999999999999999996 5689997
Q ss_pred CCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWEL 118 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL 118 (381)
+...++..-. ..| .+|.+. -.+..++..|
T Consensus 80 I~~~~G~ICL----~iL~~~WsP~--~ti~~VL~sI 109 (215)
T 1tte_A 80 ISSVTGAICL----DILRNAWSPV--ITLKSALISL 109 (215)
T ss_dssp SCSSSSCCCS----STTTCCSCTT--CCHHHHHHHH
T ss_pred CcCCCCEEEC----ccCCCCCCCc--CcHHHHHHHH
Confidence 6532232222 222 369885 2344444433
No 97
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=77.81 E-value=5.5 Score=36.02 Aligned_cols=72 Identities=19% Similarity=0.424 Sum_probs=47.9
Q ss_pred CceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhcc-cCCCCCcchHH
Q 016870 40 LDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLA-TWNNKDPTRLL 112 (381)
Q Consensus 40 ~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL~-~Wd~~dp~~Ll 112 (381)
...++..| ||.+-..+-+|.|..+||..||-+.|- -.-|+|++...++..-. ..|. +|.+.- .+.
T Consensus 74 l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~--T~i~HPNI~~~~G~ICL----~iL~~~WsP~~--ti~ 145 (193)
T 2f4z_A 74 IHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFV--TKIWHPNISSQTGAICL----DILKHEWSPAL--TIR 145 (193)
T ss_dssp EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCBTTBCTTTCBBCC----GGGTTTCCTTS--CHH
T ss_pred cceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEe--cCCccCCCcCCCCEEEC----ccccccCCCCC--CHH
Confidence 45555555 598989999999999999999999996 45799976532232211 2333 599852 344
Q ss_pred HHHHHHH
Q 016870 113 ALIWELR 119 (381)
Q Consensus 113 ~li~EL~ 119 (381)
.++..|+
T Consensus 146 ~vL~sI~ 152 (193)
T 2f4z_A 146 TALLSIQ 152 (193)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 98
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=77.50 E-value=6.6 Score=34.18 Aligned_cols=72 Identities=24% Similarity=0.395 Sum_probs=48.6
Q ss_pred CceEEEEc-----cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhc-ccCCCCCcchHHH
Q 016870 40 LDRFTLLI-----PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL-ATWNNKDPTRLLA 113 (381)
Q Consensus 40 ~DRF~L~I-----Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~ 113 (381)
...+.+.| ||.+-..+-+|.|..+||..||.+.|- -.-|||++.. ++..-. ..| .+|++.- .+..
T Consensus 34 l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~--t~i~HPnv~~-~G~iCl----~iL~~~W~p~~--~i~~ 104 (160)
T 1y8x_A 34 LLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCE--TMVYHPNIDL-EGNVCL----NILREDWKPVL--TINS 104 (160)
T ss_dssp TTEEEEEECCSSSTTTTBCEEEEEECCTTTTTSCCEEEEC--SCCCBTTBCT-TCBBCC----GGGTTTCCTTC--CHHH
T ss_pred cceEEEEECCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEe--cCCccCcCCC-CCeEEc----ccchhhccCCC--CHHH
Confidence 45555555 588888999999999999999999996 5689997652 221111 233 5799863 4444
Q ss_pred HHHHHHH
Q 016870 114 LIWELRD 120 (381)
Q Consensus 114 li~EL~~ 120 (381)
++..|+.
T Consensus 105 vL~~i~~ 111 (160)
T 1y8x_A 105 IIYGLQY 111 (160)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 99
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=77.29 E-value=4.2 Score=36.39 Aligned_cols=72 Identities=26% Similarity=0.426 Sum_probs=48.2
Q ss_pred ceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhc-ccCCCC-CcchHH
Q 016870 41 DRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL-ATWNNK-DPTRLL 112 (381)
Q Consensus 41 DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL-~~Wd~~-dp~~Ll 112 (381)
..+.+.| ||.+...+-+|.|..+||..||.+.|- -.-|+|++...++..-. ..| .+|++. +-..+|
T Consensus 51 ~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~--t~i~HPNV~~~~G~ICL----~iL~~~WsP~~ti~~iL 124 (179)
T 2z5d_A 51 NEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFM--NKIFHPNIDEASGTVCL----DVINQTWTALYDLTNIF 124 (179)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCBTTBCTTTCBBCH----HHHHHHCCTTCCTTHHH
T ss_pred ceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEe--cCCccCcCCCCCCeEec----cccccCCCCCCCHHHHH
Confidence 5566655 699999999999999999999999996 56799976422222211 222 579884 444444
Q ss_pred HH-HHHH
Q 016870 113 AL-IWEL 118 (381)
Q Consensus 113 ~l-i~EL 118 (381)
.- |+.|
T Consensus 125 ~s~I~~L 131 (179)
T 2z5d_A 125 ESFLPQL 131 (179)
T ss_dssp HTHHHHH
T ss_pred HHHHHHH
Confidence 33 4433
No 100
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.10 E-value=4.2 Score=33.55 Aligned_cols=58 Identities=19% Similarity=0.257 Sum_probs=38.0
Q ss_pred HHHHHHHHhhhcCC--Cccccccc---cceEeeeeee-----CcceEEEEEeecCCCCCCCCeEEEEe
Q 016870 265 RRRFIEALAPLFGR--PIETDSVF---YRKSMFFVAS-----GAFSFLVLFFLSTQFPKQQPSLMLQS 322 (381)
Q Consensus 265 RrefIaaL~~~fG~--~LEyDa~~---f~k~slL~~~-----~~F~flvHi~Lp~~FP~~qP~ltlQS 322 (381)
+.+=++||.+.||. -++..... -+...+-+.. ....+.++|.+|..||...|.+++.|
T Consensus 12 q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 12 VQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 34457889999987 34432211 1233333322 23689999999999999999998874
No 101
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=75.93 E-value=6.7 Score=34.99 Aligned_cols=65 Identities=15% Similarity=0.300 Sum_probs=44.7
Q ss_pred cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhc-ccCCCCCcchHHHHHHHHHHH
Q 016870 48 PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL-ATWNNKDPTRLLALIWELRDQ 121 (381)
Q Consensus 48 Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL-~~Wd~~dp~~Ll~li~EL~~~ 121 (381)
||.|-..+-+|.|..+||..||-+.|- -.-|+|++.. ++..-. ..| .+|.+.- .+..++..|+.+
T Consensus 73 pYegG~f~l~i~fp~~YP~~PP~V~F~--T~i~HPNV~~-~G~ICL----~iL~~~WsP~~--ti~~vL~sI~sl 138 (179)
T 1i7k_A 73 VYEDLRYKLSLEFPSGYPYNAPTVKFL--TPCYHPNVDT-QGNISL----DILKEKWSALY--DVRTILLSIQSL 138 (179)
T ss_dssp TTBTCEEEEEEECCTTTTTSCCEEEES--SCCCSTTBCT-TCBBCC----GGGTTTCCTTC--CHHHHHHHHHHH
T ss_pred CcCCCEEEEEEECCCcCCCCCceEEEe--cCCccCcccc-CCeEEc----ccCcCcCCCCC--CHHHHHHHHHHH
Confidence 588889999999999999999999996 5689997653 221111 233 3699852 454455444433
No 102
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=75.13 E-value=7.3 Score=34.69 Aligned_cols=60 Identities=25% Similarity=0.437 Sum_probs=43.9
Q ss_pred CceEEEEc-----cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhc-ccCCCC
Q 016870 40 LDRFTLLI-----PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL-ATWNNK 106 (381)
Q Consensus 40 ~DRF~L~I-----Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL-~~Wd~~ 106 (381)
...+.+.| ||.+-..+-+|.|..+||..||-+.|- -.-|||++.. ++..-. ..| .+|++.
T Consensus 54 l~~W~~~igP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~--t~i~HPNV~~-~G~iCl----~iL~~~W~p~ 119 (180)
T 2nvu_C 54 LLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCE--TMVYHPNIDL-EGNVAL----NILREDWKPV 119 (180)
T ss_dssp TTEEEEEECCCSGGGTTBCEEEEEECCTTTTTSCCEEEEC--SCCCBTTBCT-TSBBCC----GGGTTSCCTT
T ss_pred ccceEEEECCCCCCCCCCEEEEEEeCCCcCCCCCCcCcee--ccCccCCCCC-CCcEEc----ccccccCCCC
Confidence 45666665 688889999999999999999999996 5689997652 221111 233 579885
No 103
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=74.88 E-value=4.9 Score=34.70 Aligned_cols=61 Identities=25% Similarity=0.419 Sum_probs=43.9
Q ss_pred CceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhc-ccCCCC
Q 016870 40 LDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL-ATWNNK 106 (381)
Q Consensus 40 ~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL-~~Wd~~ 106 (381)
...+++.| ||.|-..+-+|.|..+||..||-+.|- -.=|||++...++..-. ..| .+|.+.
T Consensus 28 l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~--t~i~HPni~~~~G~iCl----~il~~~W~p~ 95 (152)
T 2onu_A 28 TQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFM--NKLLHPNVDEASGSVCL----DVINQTWTPL 95 (152)
T ss_dssp EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCCTTBCTTTCBBCH----HHHHHHCCTT
T ss_pred cceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEe--cCCccCcCcCcCCeEec----ccccccCCCC
Confidence 45666666 699999999999999999999999996 56799976422222211 223 359985
No 104
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=74.50 E-value=4.6 Score=35.85 Aligned_cols=55 Identities=18% Similarity=0.427 Sum_probs=40.7
Q ss_pred ceEEEEEeecCCCCCCCCeEEEEe-----------ee---eccCCCCccccCCCCCCCCCC-CCChHHHHHHH
Q 016870 299 FSFLVLFFLSTQFPKQQPSLMLQS-----------SM---YFNSQGMPIKSPLLTDYPWSP-RWEHSQMAERT 356 (381)
Q Consensus 299 F~flvHi~Lp~~FP~~qP~ltlQS-----------~y---H~~s~g~p~~s~~~~~YPySP-RW~~~eMa~R~ 356 (381)
+.|-|.|.||..||.++|.+.+-. +| |-+++|+.|-- -+.+ |+| ..+-.+.++-+
T Consensus 81 Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lp-yL~~--W~p~~s~L~~ll~~l 150 (162)
T 3r3q_A 81 HSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALP-ILHA--WDPAAMNLIMVVQEL 150 (162)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCG-GGGS--CCGGGCCHHHHHHHH
T ss_pred ccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCc-cccc--CCCCcCcHHHHHHHH
Confidence 559999999999999999999976 56 46799997663 4543 666 45555555544
No 105
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=74.25 E-value=11 Score=33.00 Aligned_cols=108 Identities=15% Similarity=0.134 Sum_probs=68.3
Q ss_pred HHHHHHHHHhcCC-ccEEEeeeecCCCCCCCCceEEEEccccCCcee--EEEEEcCCCCCCCCceEeCCCCC---CCcCC
Q 016870 10 ISAQLHYLINHFA-HPVRVEQAWSGSKYSNTLDRFTLLIPYCLDTIK--WDVIYNAEFPHAPPDIIFGPEDE---DFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~-~~ikv~~~~sg~~~~~~~DRF~L~IPyc~~~l~--WdVIfd~~~P~~pPDfIF~~dD~---~F~p~ 83 (381)
....+..++++++ +..+.+.-. |...--.+=.=||-|+|-|.+.+ -.+-+=-.||..||=+-+.+..+ -.+|.
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~-G~~~~LL~l~GtIpv~y~g~~y~iPi~Iwlp~~YP~~pP~vfv~pt~~m~I~~~~~ 103 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYG-TGSRELMNLTGTIPVPYRGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKH 103 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESS-STTCEEEEEEEEEEEECSSCEEEEEEEEECCTTTTTSCCEEEECCCTTEEECCBTT
T ss_pred hHHHHHHHHHhCCCCceEeeeee-CChheEEEEEEEeeeeecCccccceEEEEeCccCCCCCCEEEEeCCCCCEECCCCC
Confidence 3445666777775 466766655 33211112333566778887544 47888999999999765544221 24553
Q ss_pred CCCCCCCCCchhhhhhcccCCCCCcchHHHHHHHHHHHHHH
Q 016870 84 YNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQYMS 124 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~sL~~Wd~~dp~~Ll~li~EL~~~Y~~ 124 (381)
+ +.++.... +.|.+|+. +...|+.+|++|...+-+
T Consensus 104 V---d~~G~i~l--pyL~~W~~-~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 104 V---DANGKIYL--PYLHEWKH-PQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp B---CTTCBBCC--HHHHTCCT-TTCCHHHHHHHHHHHHHH
T ss_pred C---CCCCCEec--ccccccCC-CCCCHHHHHHHHHHHHhh
Confidence 3 22334432 89999998 348899999999887643
No 106
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=74.19 E-value=7.9 Score=34.05 Aligned_cols=68 Identities=21% Similarity=0.377 Sum_probs=47.1
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|...+.-|..+.+..|.+.-. +. +...++..| ||.|-..+-+|.|-..||..||-+.|- -.-|||+
T Consensus 9 L~kEl~~l~~~~~~gi~~~p~--~~----nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~--t~i~HPN 80 (169)
T 1ayz_A 9 LMRDFKRMKEDAPPGVSASPL--PD----NVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFL--SEMFHPN 80 (169)
T ss_dssp HHHHHHHHHHSCCTTEEEEEE--TT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCCTT
T ss_pred HHHHHHHHHhCCCCCEEEEec--CC----ccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccc--cCCccCC
Confidence 344555566666666665432 11 133444333 488888999999999999999999996 5689997
Q ss_pred CC
Q 016870 84 YN 85 (381)
Q Consensus 84 ~~ 85 (381)
+.
T Consensus 81 I~ 82 (169)
T 1ayz_A 81 VY 82 (169)
T ss_dssp BC
T ss_pred CC
Confidence 65
No 107
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=72.60 E-value=6.2 Score=34.84 Aligned_cols=61 Identities=25% Similarity=0.414 Sum_probs=44.1
Q ss_pred CceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhc-ccCCCC
Q 016870 40 LDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSL-ATWNNK 106 (381)
Q Consensus 40 ~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL-~~Wd~~ 106 (381)
...+.+.| ||.+-..+-+|.|..+||..||.+.|. -.=|+|++...++..-. ..| .+|.+.
T Consensus 37 l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~--t~i~HPNi~~~~G~iCl----~iL~~~W~p~ 104 (171)
T 1yf9_A 37 VAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFC--NRILHPNVDERSGSVCL----DVINQTWTPM 104 (171)
T ss_dssp TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES--SCCCBTTBCTTTCBBCH----HHHHHHCCTT
T ss_pred ceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEee--cCcccccCcccCCeEec----cccccCCCCC
Confidence 46666666 699999999999999999999999996 56799976422221111 223 379985
No 108
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=70.80 E-value=1.2 Score=39.97 Aligned_cols=73 Identities=15% Similarity=0.246 Sum_probs=56.2
Q ss_pred eeeeeCcceEEEEEeecCCCCCCCCeEEEEee--ee--ccCCCCccccCCCCCCCCCCCCCh--------HHHHHHHHHH
Q 016870 292 FFVASGAFSFLVLFFLSTQFPKQQPSLMLQSS--MY--FNSQGMPIKSPLLTDYPWSPRWEH--------SQMAERTFEF 359 (381)
Q Consensus 292 lL~~~~~F~flvHi~Lp~~FP~~qP~ltlQS~--yH--~~s~g~p~~s~~~~~YPySPRW~~--------~eMa~R~~~f 359 (381)
.+-....+.|=|-|++|.+||..+|.+.|+.. +| +-.+|+.|-. . =|+|-|.- .-||=-+--+
T Consensus 78 ~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLd-I----hwkPlW~~n~P~fGiahalalgl~pw 152 (168)
T 3kpa_A 78 TYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMT-T----HFFPLWARNVPYFGISHVLALGLGPW 152 (168)
T ss_dssp EEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCC-T----THHHHHHHTTTTCCHHHHHHHTHHHH
T ss_pred eeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEec-c----ccchhhHhcCCchhHHHHHHhccchH
Confidence 34444567899999999999999999999994 77 3378886664 2 29998874 4677777888
Q ss_pred HHHHhHhHHH
Q 016870 360 LVDESVNFKK 369 (381)
Q Consensus 360 l~~~~~~Fk~ 369 (381)
|+-|||.--+
T Consensus 153 la~eiP~lv~ 162 (168)
T 3kpa_A 153 LSIEVPAMVE 162 (168)
T ss_dssp HHHHHHHHHH
T ss_pred HhhhhHHHHH
Confidence 8888886544
No 109
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=67.99 E-value=6.5 Score=34.35 Aligned_cols=45 Identities=13% Similarity=0.414 Sum_probs=31.6
Q ss_pred cceEEEEEeecCCCCCCCCeEEEEe--------eeeccCCCCccccCCCCCCCCCC
Q 016870 298 AFSFLVLFFLSTQFPKQQPSLMLQS--------SMYFNSQGMPIKSPLLTDYPWSP 345 (381)
Q Consensus 298 ~F~flvHi~Lp~~FP~~qP~ltlQS--------~yH~~s~g~p~~s~~~~~YPySP 345 (381)
.|.+=|.|-||..||..+|.+-+-- ..|-+++|+-|-. -+.+ |++
T Consensus 68 ~y~iPi~Iwlp~~YP~~pP~vfv~pt~~m~I~~~~~Vd~~G~i~lp-yL~~--W~~ 120 (146)
T 3obq_A 68 TYNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKHVDANGKIYLP-YLHE--WKH 120 (146)
T ss_dssp EEEEEEEEECCTTTTTSCCEEEECCCTTEEECCBTTBCTTCBBCCH-HHHT--CCT
T ss_pred cccceEEEEeCccCCCCCCEEEEeCCCCCEECCCCCCCCCCCEecc-cccc--cCC
Confidence 3445589999999999999986532 2456789985552 4444 665
No 110
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=60.51 E-value=58 Score=32.19 Aligned_cols=68 Identities=21% Similarity=0.414 Sum_probs=47.6
Q ss_pred HHHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCCCCCcCC
Q 016870 10 ISAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPEDEDFHPF 83 (381)
Q Consensus 10 i~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~ 83 (381)
|..-+.-|..+-+..|.+.-. + .+...++..| ||.|...+-+|.|..+||..||-+.|- -.-|+|+
T Consensus 8 L~kEl~~l~~~~~~~~~~~p~--~----~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~--t~i~HPn 79 (399)
T 4ddg_A 8 IHKELNDLARDPPAQCSAGPV--G----DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFT--TRIYHPN 79 (399)
T ss_dssp HHHHHHHHHHSCCSSEEEEEE--T----TEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEES--SCCCCTT
T ss_pred HHHHHHHHHhCCCCCEEEEEc--C----CcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEee--ccccccc
Confidence 344455566665555555321 1 1234455555 599999999999999999999999996 5689997
Q ss_pred CC
Q 016870 84 YN 85 (381)
Q Consensus 84 ~~ 85 (381)
+.
T Consensus 80 v~ 81 (399)
T 4ddg_A 80 IN 81 (399)
T ss_dssp BC
T ss_pred cC
Confidence 65
No 111
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=59.46 E-value=16 Score=35.84 Aligned_cols=46 Identities=28% Similarity=0.621 Sum_probs=36.5
Q ss_pred CceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCCCC---CCCcCCCC
Q 016870 40 LDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGPED---EDFHPFYN 85 (381)
Q Consensus 40 ~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~dD---~~F~p~~~ 85 (381)
.+.++..| ||.+-..+-+|.|-..||..||-+.|-.-. .=|+|++.
T Consensus 109 l~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~ 163 (323)
T 3ceg_A 109 LDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLY 163 (323)
T ss_dssp TTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBC
T ss_pred ccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCC
Confidence 45666555 688889999999999999999999996332 26999764
No 112
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=58.43 E-value=18 Score=32.37 Aligned_cols=59 Identities=17% Similarity=0.269 Sum_probs=40.5
Q ss_pred HHHHHHHHhcCCccEEEeeeecCCCCCCCCceEEEEc------cccCCceeEEEEEcCCCCCCCCceEeCC
Q 016870 11 SAQLHYLINHFAHPVRVEQAWSGSKYSNTLDRFTLLI------PYCLDTIKWDVIYNAEFPHAPPDIIFGP 75 (381)
Q Consensus 11 ~~ql~~l~~~~~~~ikv~~~~sg~~~~~~~DRF~L~I------Pyc~~~l~WdVIfd~~~P~~pPDfIF~~ 75 (381)
..-+.-|..+-+..|.+.-. . .....+...| ||.|-..+-+|.|-.+||..||.+.|..
T Consensus 20 ~kEl~~l~~~~~~~i~~~p~--~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T 84 (187)
T 2f4w_A 20 KQDYLRIKKDPVPYICAEPL--P----SNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT 84 (187)
T ss_dssp HHHHHHHHHSCCTTEEEEEE--T----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS
T ss_pred HHHHHHHHhCCCCCEEEEEc--C----CccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccC
Confidence 34445555555555655321 1 1245555555 5999999999999999999999999974
No 113
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=51.90 E-value=11 Score=33.64 Aligned_cols=60 Identities=17% Similarity=0.368 Sum_probs=40.2
Q ss_pred CceeEEEEEcCCCCCCCCceEeCCCCCCCcC-CCCCCCCCCCchhhh-hhcc--cCCCCCcchHHHHHHHHHHH
Q 016870 52 DTIKWDVIYNAEFPHAPPDIIFGPEDEDFHP-FYNESGGEGDSRSIK-NSLA--TWNNKDPTRLLALIWELRDQ 121 (381)
Q Consensus 52 ~~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p-~~~~~~~~~~~~~~~-~sL~--~Wd~~dp~~Ll~li~EL~~~ 121 (381)
..++-+|.|..+||..||-+.|- -..|+| ++. .++ .+| ..|. +|.+. -.+..++..|+.+
T Consensus 89 g~f~l~i~fp~~YP~~PP~V~f~--tpi~hPnnV~-~~G-----~ICL~iL~~~~WsP~--~ti~~VL~sI~sl 152 (186)
T 1zuo_A 89 EYILLNFSFKDNFPFDPPFVRVV--LPVLSGGYVL-GGG-----ALCMELLTKQGWSSA--YSIESVIMQINAT 152 (186)
T ss_dssp CSEEEEEECCTTTTSSCCEEEEE--ESCEESTTBC-GGG-----BBCCGGGSTTTCCTT--SCHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCCCCCCeEEEe--CCccCCCccC-CCC-----cEEeccCCCCCCCCc--CcHHHHHHHHHHH
Confidence 57889999999999999999996 467888 343 222 222 4553 79985 3444555544443
No 114
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=31.91 E-value=58 Score=26.60 Aligned_cols=94 Identities=12% Similarity=0.140 Sum_probs=62.2
Q ss_pred cCCCccccccccceEeeeeeeCcceEEEEEeecCCC-----------CCCCCeEEEEeeeeccCCCCccccCCCCCCCCC
Q 016870 276 FGRPIETDSVFYRKSMFFVASGAFSFLVLFFLSTQF-----------PKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWS 344 (381)
Q Consensus 276 fG~~LEyDa~~f~k~slL~~~~~F~flvHi~Lp~~F-----------P~~qP~ltlQS~yH~~s~g~p~~s~~~~~YPyS 344 (381)
-|-.+|..-..|..-.+.+.-+ .++|+.=+... ....-.+..++...|. .|.+++-....|.-|+
T Consensus 10 pGDlI~~~r~~Y~H~gIYvGdg---~ViH~~~~~~~~~~~~~~~~~~~~~~~~V~~~~l~~~~-~g~~~~v~~~~d~~~~ 85 (125)
T 2lkt_A 10 PGDLIEIFRLGYEHWALYIGDG---YVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLEDVV-GGCCYRVNNSLDHEYQ 85 (125)
T ss_dssp TTCEEEEECSSSCEEEEEEETT---EEEEEECSBCCSCCCBTTBSSCCBCCEEEEEEEHHHHH-TTCEEEECCHHHHHTC
T ss_pred CCCEEEEeCCCccEEEEEeCCC---eEEEEccccccccccccceeccccCCceEEEEEHHHhc-CCCeEEEEEccCCCcC
Confidence 3555777766777777766554 68999765433 3345567788887764 4445553333344566
Q ss_pred CCCChHHHHHHHHHHHH---------HHhHhHHHHhHHH
Q 016870 345 PRWEHSQMAERTFEFLV---------DESVNFKKYCNEA 374 (381)
Q Consensus 345 PRW~~~eMa~R~~~fl~---------~~~~~Fk~~~~~~ 374 (381)
|+ .+.|.++||+..|. .+|.-|-..|.-|
T Consensus 86 p~-~~~~iv~rA~~~lg~~~~Y~l~~nNCEHFa~~cryG 123 (125)
T 2lkt_A 86 PR-PVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQLRYG 123 (125)
T ss_dssp CC-CHHHHHHHHHHHTTCEECSSCHHHHHHHHHHHHHCS
T ss_pred CC-CHHHHHHHHHHHcCCCCCcCCCccCHHHHHhhhhcc
Confidence 65 78999999988765 4578888877643
No 115
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=31.73 E-value=53 Score=28.97 Aligned_cols=107 Identities=16% Similarity=0.071 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhcCC-ccEEEeeeecCCCCCCC--CceEEEEccccCCc---eeEEEEEcCCCCCCCCceEeCCC--CC--
Q 016870 9 FISAQLHYLINHFA-HPVRVEQAWSGSKYSNT--LDRFTLLIPYCLDT---IKWDVIYNAEFPHAPPDIIFGPE--DE-- 78 (381)
Q Consensus 9 ~i~~ql~~l~~~~~-~~ikv~~~~sg~~~~~~--~DRF~L~IPyc~~~---l~WdVIfd~~~P~~pPDfIF~~d--D~-- 78 (381)
....++..++.+++ +..+.+--...+..... +=.=++-|||.|.. +.-.|-+=..||..||=+-|.++ |.
T Consensus 32 ~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~ 111 (162)
T 3r3q_A 32 TTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNT 111 (162)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTT
T ss_pred HHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccc
Confidence 34455556666665 56666555554311111 22224567788866 88899999999999997766441 21
Q ss_pred ----CC-cCCCCCCCCCCCchhhhhhcccCCCCCcchHHHHHHHHHHH
Q 016870 79 ----DF-HPFYNESGGEGDSRSIKNSLATWNNKDPTRLLALIWELRDQ 121 (381)
Q Consensus 79 ----~F-~p~~~~~~~~~~~~~~~~sL~~Wd~~dp~~Ll~li~EL~~~ 121 (381)
=+ +|.+ +.++..-. +.|.+|+... ..|..||++|..+
T Consensus 112 ~~~~I~~hpnV---D~~G~I~l--pyL~~W~p~~-s~L~~ll~~l~~l 153 (162)
T 3r3q_A 112 ISSSLPIQEYI---DSNGWIAL--PILHAWDPAA-MNLIMVVQELMSL 153 (162)
T ss_dssp SCTTSTHHHHB---CTTSBBCC--GGGGSCCGGG-CCHHHHHHHHHHT
T ss_pred cccccCCCCCC---CCCCcEeC--cccccCCCCc-CcHHHHHHHHHHH
Confidence 22 5644 23334432 8999999521 4677777777654
No 116
>2g7o_A Protein TRAM; four helix bundle, tetramer, DNA binding protein; 1.40A {Escherichia coli} SCOP: a.241.1.1 PDB: 3d8a_A 2g9e_A
Probab=30.21 E-value=34 Score=26.71 Aligned_cols=24 Identities=25% Similarity=0.333 Sum_probs=22.4
Q ss_pred CCCCChHHHHHHHHHHHHHHhHhH
Q 016870 344 SPRWEHSQMAERTFEFLVDESVNF 367 (381)
Q Consensus 344 SPRW~~~eMa~R~~~fl~~~~~~F 367 (381)
+|||+=+.|+..|+++..+++..|
T Consensus 40 ~~~fey~~mv~~Ir~~~~e~~~~F 63 (70)
T 2g7o_A 40 NSKFEYANMVEDIREKVSSEMERF 63 (70)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999887
No 117
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=27.59 E-value=13 Score=33.73 Aligned_cols=56 Identities=16% Similarity=0.387 Sum_probs=36.2
Q ss_pred cccCC-ceeEEEEEcCCCCCCCCceEeCCCCCCCcCCCCCCCCCCCchhhhhhcccCCCCCc--chHHHH
Q 016870 48 PYCLD-TIKWDVIYNAEFPHAPPDIIFGPEDEDFHPFYNESGGEGDSRSIKNSLATWNNKDP--TRLLAL 114 (381)
Q Consensus 48 Pyc~~-~l~WdVIfd~~~P~~pPDfIF~~dD~~F~p~~~~~~~~~~~~~~~~sL~~Wd~~dp--~~Ll~l 114 (381)
..... +++-+| |..+|.+.|++-|.|-|+.=.|. -..+...+.+||.... +.|.++
T Consensus 121 alg~~vsl~i~v--dP~~P~~lPe~~FlG~~~~v~~l---------r~~~~~nl~~Wd~~~~i~~NL~~i 179 (186)
T 3zqs_A 121 ALGNNVSINIEV--DPRHPTMLPECFFLGADHVVKPL---------GIKLSRNIHLWDPENSVLQNLKDV 179 (186)
T ss_dssp EEETTEEEEEEC--CTTSTTSCCEEEEEECHHHHHHH---------HHHHHHHGGGCCTTSCHHHHHHHH
T ss_pred EECCCcEEEEEE--CCCCCCcCCceEEECChHHHHHH---------HHHHhhhHhhcCCCCCHHHHHHHH
Confidence 33343 556565 99999999999987555443331 1233478999998643 555544
Done!