Query 016871
Match_columns 381
No_of_seqs 279 out of 2411
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 05:10:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016871.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016871hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 1E-27 3.6E-32 227.7 27.5 292 58-378 1-302 (425)
2 3nks_A Protoporphyrinogen oxid 100.0 1.4E-27 4.7E-32 230.3 26.3 296 57-377 2-334 (477)
3 1s3e_A Amine oxidase [flavin-c 100.0 7E-28 2.4E-32 234.7 23.3 296 56-372 3-310 (520)
4 3nrn_A Uncharacterized protein 100.0 5.2E-27 1.8E-31 222.7 26.8 289 58-379 1-291 (421)
5 2ivd_A PPO, PPOX, protoporphyr 100.0 3.1E-27 1E-31 227.9 23.9 288 54-370 13-332 (478)
6 2vvm_A Monoamine oxidase N; FA 100.0 8.8E-27 3E-31 225.7 23.0 296 57-369 39-351 (495)
7 4dgk_A Phytoene dehydrogenase; 100.0 7.8E-27 2.7E-31 226.4 22.3 303 58-377 2-327 (501)
8 3i6d_A Protoporphyrinogen oxid 99.9 5.8E-27 2E-31 225.4 20.3 291 57-370 5-325 (470)
9 4gde_A UDP-galactopyranose mut 99.9 1.2E-27 4E-32 232.9 13.4 285 55-368 8-310 (513)
10 2yg5_A Putrescine oxidase; oxi 99.9 2.4E-26 8.2E-31 220.2 21.0 297 57-371 5-309 (453)
11 3lov_A Protoporphyrinogen oxid 99.9 2.2E-26 7.6E-31 221.7 20.8 298 57-376 4-330 (475)
12 1sez_A Protoporphyrinogen oxid 99.9 7.6E-25 2.6E-29 212.6 18.9 292 56-369 12-347 (504)
13 4dsg_A UDP-galactopyranose mut 99.9 5.2E-24 1.8E-28 204.9 18.6 294 56-379 8-323 (484)
14 3k7m_X 6-hydroxy-L-nicotine ox 99.9 2.5E-22 8.7E-27 191.0 26.4 288 58-368 2-297 (431)
15 1rsg_A FMS1 protein; FAD bindi 99.9 2.8E-23 9.6E-28 202.0 17.6 276 56-371 7-309 (516)
16 3p1w_A Rabgdi protein; GDI RAB 99.9 3.5E-22 1.2E-26 189.1 23.0 263 54-329 17-313 (475)
17 2jae_A L-amino acid oxidase; o 99.9 9.8E-23 3.3E-27 197.0 16.0 288 55-370 9-334 (489)
18 2iid_A L-amino-acid oxidase; f 99.9 1.3E-21 4.3E-26 189.6 21.8 291 55-370 31-338 (498)
19 1b37_A Protein (polyamine oxid 99.9 1.8E-21 6.1E-26 187.2 15.3 287 56-370 3-312 (472)
20 2b9w_A Putative aminooxidase; 99.9 6.3E-21 2.1E-25 180.9 18.5 272 56-356 5-281 (424)
21 2bcg_G Secretory pathway GDP d 99.9 3.5E-20 1.2E-24 177.0 20.0 258 55-329 9-299 (453)
22 4gut_A Lysine-specific histone 99.8 2.7E-20 9.3E-25 187.0 19.2 286 55-370 334-627 (776)
23 1d5t_A Guanine nucleotide diss 99.8 1.1E-19 3.7E-24 172.6 21.5 258 55-329 4-289 (433)
24 3qj4_A Renalase; FAD/NAD(P)-bi 99.8 2.7E-19 9.3E-24 164.7 19.5 102 271-377 111-214 (342)
25 1v0j_A UDP-galactopyranose mut 99.8 2.5E-21 8.6E-26 181.8 4.2 269 56-376 6-283 (399)
26 3ayj_A Pro-enzyme of L-phenyla 99.8 3.1E-20 1.1E-24 183.0 12.1 75 57-131 56-162 (721)
27 2bi7_A UDP-galactopyranose mut 99.8 1.2E-19 4.1E-24 169.4 12.4 251 57-364 3-260 (384)
28 1i8t_A UDP-galactopyranose mut 99.8 1.4E-20 4.9E-25 174.6 5.9 255 58-368 2-261 (367)
29 3hdq_A UDP-galactopyranose mut 99.8 2E-19 6.9E-24 167.1 11.0 264 55-374 27-295 (397)
30 2xag_A Lysine-specific histone 99.8 4.7E-18 1.6E-22 171.9 18.2 77 55-132 276-353 (852)
31 2z3y_A Lysine-specific histone 99.8 7.6E-18 2.6E-22 167.9 19.3 77 55-132 105-182 (662)
32 1yvv_A Amine oxidase, flavin-c 99.8 4.6E-17 1.6E-21 149.3 18.9 200 57-374 2-203 (336)
33 1vg0_A RAB proteins geranylger 99.7 1.4E-15 4.8E-20 148.1 28.5 216 121-368 239-461 (650)
34 2e1m_A L-glutamate oxidase; L- 99.7 2.7E-17 9.2E-22 151.6 13.8 80 55-134 42-131 (376)
35 3dje_A Fructosyl amine: oxygen 99.6 3.2E-15 1.1E-19 142.2 13.9 64 271-336 160-226 (438)
36 3ps9_A TRNA 5-methylaminomethy 99.6 3.2E-14 1.1E-18 142.5 17.8 63 271-336 416-478 (676)
37 3nyc_A D-arginine dehydrogenas 99.6 1.6E-15 5.6E-20 141.3 7.3 57 271-330 153-209 (381)
38 3dme_A Conserved exported prot 99.6 1.2E-14 4.3E-19 134.6 11.4 62 271-334 149-212 (369)
39 2uzz_A N-methyl-L-tryptophan o 99.5 4.7E-14 1.6E-18 131.1 14.0 63 271-337 148-210 (372)
40 3pvc_A TRNA 5-methylaminomethy 99.5 9.1E-14 3.1E-18 139.4 16.3 63 271-336 411-474 (689)
41 2gag_B Heterotetrameric sarcos 99.5 1.2E-13 4.1E-18 129.8 15.9 58 271-330 173-230 (405)
42 2oln_A NIKD protein; flavoprot 99.5 8.1E-14 2.8E-18 130.7 14.7 56 271-329 152-207 (397)
43 1y56_B Sarcosine oxidase; dehy 99.5 1E-13 3.4E-18 129.4 13.8 58 271-330 148-205 (382)
44 2gf3_A MSOX, monomeric sarcosi 99.5 1.1E-13 3.9E-18 129.3 14.0 61 271-335 149-209 (389)
45 4at0_A 3-ketosteroid-delta4-5a 99.5 2.9E-13 9.9E-18 131.0 16.9 58 273-330 203-264 (510)
46 2i0z_A NAD(FAD)-utilizing dehy 99.5 7.3E-14 2.5E-18 133.0 12.2 59 271-330 133-191 (447)
47 3da1_A Glycerol-3-phosphate de 99.5 1.2E-13 4E-18 135.0 13.6 59 271-330 169-232 (561)
48 1qo8_A Flavocytochrome C3 fuma 99.5 5.7E-13 1.9E-17 130.6 17.5 60 271-330 249-312 (566)
49 1y0p_A Fumarate reductase flav 99.5 1E-12 3.5E-17 129.0 18.5 59 271-329 254-316 (571)
50 1ryi_A Glycine oxidase; flavop 99.5 3.6E-13 1.2E-17 125.6 14.0 56 271-329 163-218 (382)
51 3v76_A Flavoprotein; structura 99.5 2.7E-13 9.1E-18 127.5 11.8 57 271-330 131-187 (417)
52 1pj5_A N,N-dimethylglycine oxi 99.4 3.9E-13 1.3E-17 137.6 12.5 58 271-330 150-207 (830)
53 3axb_A Putative oxidoreductase 99.4 5.8E-13 2E-17 126.9 11.8 59 271-330 180-254 (448)
54 2rgh_A Alpha-glycerophosphate 99.4 5.7E-13 1.9E-17 130.5 11.2 62 271-334 187-253 (571)
55 3k30_A Histamine dehydrogenase 99.4 9.3E-13 3.2E-17 132.0 11.1 91 8-98 332-432 (690)
56 3nlc_A Uncharacterized protein 99.4 6.9E-12 2.4E-16 121.2 14.9 58 272-330 220-277 (549)
57 3nix_A Flavoprotein/dehydrogen 99.3 2.6E-12 8.8E-17 121.4 10.0 65 272-336 106-173 (421)
58 2gqf_A Hypothetical protein HI 99.3 6.4E-12 2.2E-16 117.6 12.0 58 271-330 108-168 (401)
59 1d4d_A Flavocytochrome C fumar 99.3 2.6E-11 9.1E-16 118.8 16.9 58 272-329 255-316 (572)
60 3cgv_A Geranylgeranyl reductas 99.3 1.5E-11 5.1E-16 115.0 13.4 56 273-329 103-161 (397)
61 2wdq_A Succinate dehydrogenase 99.3 5.7E-11 1.9E-15 116.5 18.0 59 272-330 143-206 (588)
62 3rp8_A Flavoprotein monooxygen 99.3 8.1E-12 2.8E-16 117.5 11.4 53 273-329 128-180 (407)
63 2qcu_A Aerobic glycerol-3-phos 99.3 5.4E-12 1.8E-16 121.9 10.0 61 271-334 148-213 (501)
64 3i3l_A Alkylhalidase CMLS; fla 99.3 4.9E-11 1.7E-15 116.8 15.6 57 272-329 128-187 (591)
65 3c4n_A Uncharacterized protein 99.3 2.1E-12 7.3E-17 121.3 5.2 57 271-330 171-236 (405)
66 2weu_A Tryptophan 5-halogenase 99.2 1.9E-10 6.4E-15 111.4 17.6 59 271-330 172-230 (511)
67 1chu_A Protein (L-aspartate ox 99.2 7E-11 2.4E-15 114.8 14.2 59 272-330 138-208 (540)
68 3kkj_A Amine oxidase, flavin-c 99.2 1E-11 3.4E-16 109.9 7.4 68 57-125 2-69 (336)
69 2qa2_A CABE, polyketide oxygen 99.2 1E-10 3.5E-15 112.7 14.4 62 273-336 108-173 (499)
70 2bs2_A Quinol-fumarate reducta 99.2 1.3E-10 4.5E-15 115.1 15.3 58 272-330 158-220 (660)
71 2qa1_A PGAE, polyketide oxygen 99.2 7.3E-11 2.5E-15 113.7 13.0 62 273-336 107-172 (500)
72 2h88_A Succinate dehydrogenase 99.2 1.6E-10 5.3E-15 113.7 15.5 58 272-330 155-217 (621)
73 3fmw_A Oxygenase; mithramycin, 99.2 3.8E-11 1.3E-15 117.3 11.1 65 272-336 148-214 (570)
74 3ihg_A RDME; flavoenzyme, anth 99.2 9.7E-11 3.3E-15 114.1 13.9 63 273-335 121-189 (535)
75 4ap3_A Steroid monooxygenase; 99.2 3.4E-11 1.2E-15 117.1 10.2 42 56-97 20-61 (549)
76 2x3n_A Probable FAD-dependent 99.2 7.3E-11 2.5E-15 110.6 12.1 64 272-336 107-173 (399)
77 3gwf_A Cyclohexanone monooxyge 99.2 4.3E-11 1.5E-15 116.2 10.2 55 275-329 90-146 (540)
78 1rp0_A ARA6, thiazole biosynth 99.2 1.3E-10 4.6E-15 103.5 12.4 40 56-95 38-78 (284)
79 2gmh_A Electron transfer flavo 99.2 1E-10 3.6E-15 114.7 12.3 57 273-329 145-216 (584)
80 2aqj_A Tryptophan halogenase, 99.2 3.1E-10 1.1E-14 110.5 15.5 59 271-330 164-222 (538)
81 2vou_A 2,6-dihydroxypyridine h 99.2 3.1E-10 1.1E-14 106.2 14.9 62 56-132 4-65 (397)
82 3e1t_A Halogenase; flavoprotei 99.2 1.8E-10 6.1E-15 111.5 13.2 56 273-329 112-171 (512)
83 1mo9_A ORF3; nucleotide bindin 99.2 4.6E-10 1.6E-14 108.9 16.0 58 272-329 255-315 (523)
84 3oz2_A Digeranylgeranylglycero 99.2 1.8E-10 6.2E-15 107.4 12.7 39 56-94 3-41 (397)
85 4a9w_A Monooxygenase; baeyer-v 99.2 1.7E-10 5.9E-15 106.0 11.9 40 57-96 3-42 (357)
86 2pyx_A Tryptophan halogenase; 99.2 1.1E-09 3.8E-14 106.3 18.2 59 271-330 174-233 (526)
87 2e4g_A Tryptophan halogenase; 99.2 9.1E-11 3.1E-15 114.5 10.4 59 271-330 193-252 (550)
88 1c0p_A D-amino acid oxidase; a 99.2 4E-11 1.4E-15 110.9 7.4 40 56-95 5-44 (363)
89 3itj_A Thioredoxin reductase 1 99.1 1.1E-10 3.8E-15 106.5 10.0 74 260-334 196-275 (338)
90 3alj_A 2-methyl-3-hydroxypyrid 99.1 1.5E-10 5.3E-15 107.6 11.0 53 272-329 107-159 (379)
91 3o0h_A Glutathione reductase; 99.1 8.2E-11 2.8E-15 113.1 9.4 56 272-329 232-287 (484)
92 1w4x_A Phenylacetone monooxyge 99.1 5.2E-10 1.8E-14 109.0 13.9 42 55-96 14-55 (542)
93 2bry_A NEDD9 interacting prote 99.1 2.4E-10 8.2E-15 110.0 11.4 40 55-94 90-129 (497)
94 3lxd_A FAD-dependent pyridine 99.1 3.6E-10 1.2E-14 106.4 11.6 58 271-329 193-250 (415)
95 1kf6_A Fumarate reductase flav 99.1 1.5E-09 5.3E-14 106.6 16.4 58 272-330 134-197 (602)
96 2e5v_A L-aspartate oxidase; ar 99.1 5.7E-10 2E-14 106.7 12.9 56 272-330 119-176 (472)
97 3jsk_A Cypbp37 protein; octame 99.1 7.4E-10 2.5E-14 100.1 12.5 40 56-95 78-119 (344)
98 3ces_A MNMG, tRNA uridine 5-ca 99.1 3.6E-10 1.2E-14 110.2 11.2 61 273-335 125-186 (651)
99 2cul_A Glucose-inhibited divis 99.1 5.5E-10 1.9E-14 96.5 11.3 59 273-333 69-128 (232)
100 3ab1_A Ferredoxin--NADP reduct 99.1 4.2E-10 1.4E-14 103.8 11.2 53 276-329 78-130 (360)
101 1k0i_A P-hydroxybenzoate hydro 99.1 1.1E-09 3.7E-14 102.4 14.0 63 273-336 104-170 (394)
102 2zbw_A Thioredoxin reductase; 99.1 5.3E-10 1.8E-14 102.0 11.3 41 56-96 4-44 (335)
103 2zxi_A TRNA uridine 5-carboxym 99.1 3.5E-10 1.2E-14 109.9 10.3 60 273-334 124-184 (637)
104 4fk1_A Putative thioredoxin re 99.1 8.3E-10 2.8E-14 99.4 12.1 37 55-91 4-40 (304)
105 3atr_A Conserved archaeal prot 99.1 8.9E-10 3.1E-14 105.0 13.0 63 273-336 101-169 (453)
106 3uox_A Otemo; baeyer-villiger 99.1 6.7E-10 2.3E-14 107.9 12.1 41 56-96 8-48 (545)
107 3f8d_A Thioredoxin reductase ( 99.1 5.4E-10 1.8E-14 101.2 10.6 50 277-329 75-124 (323)
108 3d1c_A Flavin-containing putat 99.1 6.3E-10 2.1E-14 102.9 10.8 53 275-330 91-143 (369)
109 3urh_A Dihydrolipoyl dehydroge 99.1 2.4E-10 8.2E-15 110.1 8.2 42 56-97 24-65 (491)
110 2gjc_A Thiazole biosynthetic e 99.1 1.3E-09 4.4E-14 97.9 12.4 41 56-96 64-106 (326)
111 4dna_A Probable glutathione re 99.1 3E-10 1E-14 108.5 8.7 57 272-330 211-268 (463)
112 3lzw_A Ferredoxin--NADP reduct 99.1 5.7E-10 1.9E-14 101.5 10.1 40 57-96 7-46 (332)
113 3fg2_P Putative rubredoxin red 99.0 9E-10 3.1E-14 103.3 11.5 58 271-329 183-240 (404)
114 3g3e_A D-amino-acid oxidase; F 99.0 1.1E-11 3.7E-16 114.2 -1.8 52 271-337 141-192 (351)
115 3c96_A Flavin-containing monoo 99.0 1.5E-09 5.2E-14 102.0 12.9 37 57-93 4-41 (410)
116 2xdo_A TETX2 protein; tetracyc 99.0 4.5E-10 1.5E-14 105.2 7.8 40 55-94 24-63 (398)
117 1jnr_A Adenylylsulfate reducta 99.0 3E-09 1E-13 105.5 13.9 58 272-329 151-217 (643)
118 4hb9_A Similarities with proba 99.0 1.7E-09 5.7E-14 101.4 10.9 43 286-329 123-165 (412)
119 3lad_A Dihydrolipoamide dehydr 99.0 1.8E-09 6.2E-14 103.5 11.0 56 272-329 221-279 (476)
120 1fec_A Trypanothione reductase 99.0 6.3E-10 2.2E-14 107.0 7.8 57 272-329 231-287 (490)
121 3r9u_A Thioredoxin reductase; 99.0 2.4E-09 8E-14 96.6 11.1 42 56-98 3-45 (315)
122 3gyx_A Adenylylsulfate reducta 99.0 3.3E-09 1.1E-13 105.0 12.8 58 272-329 166-232 (662)
123 3oc4_A Oxidoreductase, pyridin 99.0 1.6E-09 5.4E-14 103.2 10.1 62 271-335 188-249 (452)
124 2ywl_A Thioredoxin reductase r 99.0 4.2E-09 1.4E-13 87.0 11.3 52 274-329 58-109 (180)
125 3ics_A Coenzyme A-disulfide re 99.0 1.6E-09 5.6E-14 106.6 10.3 54 272-329 228-281 (588)
126 3s5w_A L-ornithine 5-monooxyge 99.0 1.5E-09 5.1E-14 103.7 9.2 38 56-93 29-71 (463)
127 2hqm_A GR, grase, glutathione 98.9 1.5E-09 5.2E-14 104.1 9.0 58 272-329 226-284 (479)
128 2r0c_A REBC; flavin adenine di 98.9 5.2E-09 1.8E-13 102.1 12.8 62 56-133 25-86 (549)
129 1y56_A Hypothetical protein PH 98.9 7.1E-10 2.4E-14 106.7 6.2 51 277-329 262-312 (493)
130 2r9z_A Glutathione amide reduc 98.9 1.3E-08 4.3E-13 97.2 14.8 55 273-329 208-263 (463)
131 2gv8_A Monooxygenase; FMO, FAD 98.9 3.6E-09 1.2E-13 100.6 10.8 42 56-97 5-48 (447)
132 2yqu_A 2-oxoglutarate dehydrog 98.9 7E-09 2.4E-13 98.8 12.9 57 272-330 208-264 (455)
133 2dkh_A 3-hydroxybenzoate hydro 98.9 7.4E-09 2.5E-13 102.8 13.2 64 273-336 142-218 (639)
134 2q7v_A Thioredoxin reductase; 98.9 6.2E-09 2.1E-13 94.5 11.6 40 56-96 7-46 (325)
135 1ges_A Glutathione reductase; 98.9 1.1E-08 3.8E-13 97.2 13.7 56 273-329 209-264 (450)
136 3cp8_A TRNA uridine 5-carboxym 98.9 5.5E-09 1.9E-13 101.9 11.4 57 273-331 118-175 (641)
137 1onf_A GR, grase, glutathione 98.9 1.5E-08 5.2E-13 97.6 14.5 57 272-329 217-274 (500)
138 1xdi_A RV3303C-LPDA; reductase 98.9 5.6E-09 1.9E-13 100.7 11.4 61 272-334 223-283 (499)
139 3iwa_A FAD-dependent pyridine 98.9 5.7E-09 2E-13 99.9 11.2 56 272-329 202-257 (472)
140 2q0l_A TRXR, thioredoxin reduc 98.9 4.7E-09 1.6E-13 94.6 10.1 38 58-96 2-40 (311)
141 3dk9_A Grase, GR, glutathione 98.9 1.2E-08 4.1E-13 97.8 12.9 58 272-329 228-292 (478)
142 2wpf_A Trypanothione reductase 98.9 2E-09 7E-14 103.6 7.1 57 272-329 235-291 (495)
143 3fbs_A Oxidoreductase; structu 98.9 1E-08 3.4E-13 91.6 11.1 34 57-90 2-35 (297)
144 3ef6_A Toluene 1,2-dioxygenase 98.9 5.4E-09 1.9E-13 98.2 9.1 56 272-329 185-240 (410)
145 4a5l_A Thioredoxin reductase; 98.9 2.6E-08 8.9E-13 89.8 13.0 36 56-91 3-38 (314)
146 1vdc_A NTR, NADPH dependent th 98.9 7.8E-09 2.7E-13 94.1 9.6 50 276-329 74-123 (333)
147 1trb_A Thioredoxin reductase; 98.9 1E-08 3.6E-13 92.7 10.4 62 273-335 185-252 (320)
148 3dgh_A TRXR-1, thioredoxin red 98.8 5.6E-09 1.9E-13 100.3 8.8 57 272-329 227-288 (483)
149 2xve_A Flavin-containing monoo 98.8 1E-08 3.5E-13 97.8 10.4 41 58-98 3-49 (464)
150 1fl2_A Alkyl hydroperoxide red 98.8 1.2E-08 4E-13 91.9 10.2 52 278-329 62-114 (310)
151 1zk7_A HGII, reductase, mercur 98.8 6.6E-08 2.3E-12 92.4 14.9 56 272-330 216-271 (467)
152 3qvp_A Glucose oxidase; oxidor 98.8 1.4E-08 4.9E-13 98.9 10.4 53 283-335 238-298 (583)
153 1hyu_A AHPF, alkyl hydroperoxi 98.8 2.1E-08 7.1E-13 97.1 11.4 52 278-329 273-325 (521)
154 1q1r_A Putidaredoxin reductase 98.8 1.5E-08 5.3E-13 95.7 10.2 58 272-329 191-249 (431)
155 2a87_A TRXR, TR, thioredoxin r 98.8 3.5E-08 1.2E-12 89.9 11.9 39 55-94 12-50 (335)
156 3cty_A Thioredoxin reductase; 98.8 1.8E-08 6.1E-13 91.2 9.7 40 56-96 15-54 (319)
157 3h8l_A NADH oxidase; membrane 98.8 4.4E-08 1.5E-12 91.9 12.2 52 272-329 218-269 (409)
158 1dxl_A Dihydrolipoamide dehydr 98.8 4.5E-08 1.5E-12 93.6 11.9 41 56-96 5-45 (470)
159 1v59_A Dihydrolipoamide dehydr 98.8 3.1E-08 1E-12 95.0 10.6 40 57-96 5-44 (478)
160 1ojt_A Surface protein; redox- 98.7 6.1E-08 2.1E-12 93.0 12.4 41 56-96 5-45 (482)
161 3ntd_A FAD-dependent pyridine 98.7 7.8E-08 2.7E-12 94.2 13.2 57 272-329 192-266 (565)
162 3q9t_A Choline dehydrogenase a 98.7 1.1E-08 3.8E-13 99.7 7.0 52 284-335 218-275 (577)
163 2qae_A Lipoamide, dihydrolipoy 98.7 7.5E-08 2.6E-12 92.0 12.8 41 57-97 2-42 (468)
164 3klj_A NAD(FAD)-dependent dehy 98.7 4E-08 1.4E-12 91.3 10.3 44 282-329 72-115 (385)
165 2eq6_A Pyruvate dehydrogenase 98.7 1.1E-07 3.6E-12 90.9 13.3 56 272-329 210-270 (464)
166 1o94_A Tmadh, trimethylamine d 98.7 7.4E-09 2.5E-13 104.2 5.5 90 9-98 330-430 (729)
167 4b1b_A TRXR, thioredoxin reduc 98.7 5.3E-08 1.8E-12 94.2 10.9 57 271-329 262-318 (542)
168 3h28_A Sulfide-quinone reducta 98.7 1.3E-08 4.6E-13 96.1 6.4 37 58-94 3-41 (430)
169 3l8k_A Dihydrolipoyl dehydroge 98.7 1E-07 3.5E-12 91.0 12.5 41 57-97 4-44 (466)
170 4eqs_A Coenzyme A disulfide re 98.7 2.1E-08 7.3E-13 94.9 7.5 53 271-329 187-239 (437)
171 3qfa_A Thioredoxin reductase 1 98.7 3.1E-07 1.1E-11 88.9 15.4 35 56-90 31-65 (519)
172 3t37_A Probable dehydrogenase; 98.7 3.7E-08 1.3E-12 95.6 8.9 50 285-335 224-276 (526)
173 3fim_B ARYL-alcohol oxidase; A 98.7 4.4E-08 1.5E-12 95.3 8.9 36 57-92 2-38 (566)
174 1pn0_A Phenol 2-monooxygenase; 98.7 1.6E-07 5.5E-12 93.4 13.1 61 57-133 8-73 (665)
175 1n4w_A CHOD, cholesterol oxida 98.7 1.8E-07 6.1E-12 90.2 12.8 63 273-335 222-293 (504)
176 1m6i_A Programmed cell death p 98.7 1.7E-07 5.7E-12 90.1 12.5 56 272-329 226-281 (493)
177 1ebd_A E3BD, dihydrolipoamide 98.7 1.6E-07 5.5E-12 89.4 12.3 39 57-96 3-41 (455)
178 3dgz_A Thioredoxin reductase 2 98.7 5.4E-07 1.9E-11 86.5 16.1 33 56-88 5-37 (488)
179 1ps9_A 2,4-dienoyl-COA reducta 98.7 2.1E-08 7.2E-13 100.1 6.3 87 8-97 318-413 (671)
180 4g6h_A Rotenone-insensitive NA 98.6 6.1E-08 2.1E-12 93.2 9.0 56 271-328 271-330 (502)
181 2a8x_A Dihydrolipoyl dehydroge 98.6 1.8E-07 6.2E-12 89.3 12.1 39 57-96 3-41 (464)
182 3fpz_A Thiazole biosynthetic e 98.6 1.5E-08 5.1E-13 92.1 3.9 42 56-97 64-107 (326)
183 2jbv_A Choline oxidase; alcoho 98.6 1.4E-07 4.7E-12 91.8 11.0 52 284-335 221-278 (546)
184 2v3a_A Rubredoxin reductase; a 98.6 3.1E-07 1.1E-11 85.4 12.2 50 278-329 193-242 (384)
185 1coy_A Cholesterol oxidase; ox 98.6 4.2E-07 1.4E-11 87.6 13.1 63 273-335 227-298 (507)
186 1ju2_A HydroxynitrIle lyase; f 98.5 6.3E-07 2.2E-11 86.9 12.8 58 278-335 200-266 (536)
187 4gcm_A TRXR, thioredoxin reduc 98.5 5.9E-08 2E-12 87.5 5.2 41 56-97 5-45 (312)
188 1xhc_A NADH oxidase /nitrite r 98.5 5E-07 1.7E-11 83.4 10.6 35 56-91 7-41 (367)
189 3hyw_A Sulfide-quinone reducta 98.5 1.6E-07 5.4E-12 88.7 7.2 33 58-90 3-37 (430)
190 1nhp_A NADH peroxidase; oxidor 98.5 8.9E-07 3E-11 84.0 12.4 36 58-93 1-38 (447)
191 4b63_A L-ornithine N5 monooxyg 98.5 6.9E-07 2.3E-11 86.0 11.6 40 55-94 37-76 (501)
192 3cgb_A Pyridine nucleotide-dis 98.5 4.6E-07 1.6E-11 86.8 10.3 37 57-93 36-74 (480)
193 2cdu_A NADPH oxidase; flavoenz 98.5 4E-07 1.4E-11 86.6 9.8 35 58-92 1-37 (452)
194 3vrd_B FCCB subunit, flavocyto 98.5 4.8E-08 1.7E-12 91.4 3.3 45 282-328 212-256 (401)
195 2gqw_A Ferredoxin reductase; f 98.5 1.4E-06 4.8E-11 81.6 13.3 46 278-329 193-238 (408)
196 2bc0_A NADH oxidase; flavoprot 98.5 6.3E-07 2.1E-11 86.1 10.7 37 56-92 34-73 (490)
197 3sx6_A Sulfide-quinone reducta 98.5 3.3E-07 1.1E-11 86.7 8.6 34 57-90 4-40 (437)
198 2cdu_A NADPH oxidase; flavoenz 98.4 1.1E-06 3.9E-11 83.4 11.5 50 278-329 197-246 (452)
199 1nhp_A NADH peroxidase; oxidor 98.4 1.5E-06 5.1E-11 82.5 11.3 49 278-329 197-245 (447)
200 2bc0_A NADH oxidase; flavoprot 98.4 2E-06 6.9E-11 82.5 11.8 49 278-329 242-290 (490)
201 2vdc_G Glutamate synthase [NAD 98.3 5.7E-07 1.9E-11 85.4 6.2 43 55-97 120-162 (456)
202 1v59_A Dihydrolipoamide dehydr 98.3 5.4E-06 1.8E-10 79.3 12.7 35 57-91 183-217 (478)
203 3cgb_A Pyridine nucleotide-dis 98.3 3.9E-06 1.3E-10 80.3 11.0 49 278-329 233-281 (480)
204 1ebd_A E3BD, dihydrolipoamide 98.2 7.6E-06 2.6E-10 77.7 11.8 35 57-91 170-204 (455)
205 1zmd_A Dihydrolipoyl dehydroge 98.2 6.6E-07 2.2E-11 85.6 4.1 41 56-96 5-45 (474)
206 1zmd_A Dihydrolipoyl dehydroge 98.2 1.3E-05 4.3E-10 76.7 12.9 35 57-91 178-212 (474)
207 1ojt_A Surface protein; redox- 98.2 6.2E-06 2.1E-10 79.0 9.9 50 278-329 232-285 (482)
208 2a8x_A Dihydrolipoyl dehydroge 98.1 2E-05 6.7E-10 75.1 12.8 35 57-91 171-205 (464)
209 3c4a_A Probable tryptophan hyd 98.1 2E-06 6.8E-11 79.8 5.5 35 58-92 1-37 (381)
210 3ihm_A Styrene monooxygenase A 98.1 1.6E-06 5.4E-11 81.8 4.8 35 56-90 21-55 (430)
211 2qae_A Lipoamide, dihydrolipoy 98.1 2.3E-05 7.9E-10 74.7 12.8 50 278-329 221-275 (468)
212 3ic9_A Dihydrolipoamide dehydr 98.1 1.5E-06 5E-11 83.5 4.4 56 272-330 215-274 (492)
213 3pl8_A Pyranose 2-oxidase; sub 98.1 1.9E-06 6.6E-11 84.9 5.3 41 56-96 45-85 (623)
214 1lvl_A Dihydrolipoamide dehydr 98.1 9.5E-06 3.2E-10 77.1 9.5 35 57-91 171-205 (458)
215 1lvl_A Dihydrolipoamide dehydr 98.1 1.6E-06 5.3E-11 82.6 3.6 41 56-97 4-44 (458)
216 1dxl_A Dihydrolipoamide dehydr 98.0 1.9E-05 6.4E-10 75.3 10.5 35 57-91 177-211 (470)
217 3ic9_A Dihydrolipoamide dehydr 98.0 4.5E-05 1.5E-09 73.1 12.5 36 57-92 174-209 (492)
218 3g5s_A Methylenetetrahydrofola 98.0 5.7E-06 2E-10 75.4 5.4 37 58-94 2-38 (443)
219 1xhc_A NADH oxidase /nitrite r 98.0 2.1E-05 7.2E-10 72.4 9.2 33 58-90 144-176 (367)
220 3s5w_A L-ornithine 5-monooxyge 98.0 0.00012 4E-09 69.6 14.1 36 56-91 226-263 (463)
221 2e1m_B L-glutamate oxidase; L- 97.9 1E-05 3.6E-10 61.9 5.0 57 315-371 4-60 (130)
222 3kd9_A Coenzyme A disulfide re 97.9 6.7E-05 2.3E-09 71.0 11.7 35 56-90 147-181 (449)
223 2gag_A Heterotetrameric sarcos 97.9 7.3E-06 2.5E-10 84.9 5.0 41 57-97 128-168 (965)
224 1gte_A Dihydropyrimidine dehyd 97.9 8.2E-06 2.8E-10 85.1 5.3 41 56-96 186-227 (1025)
225 1lqt_A FPRA; NADP+ derivative, 97.9 7.1E-06 2.4E-10 77.9 4.2 40 57-96 3-49 (456)
226 3kd9_A Coenzyme A disulfide re 97.8 1.2E-05 4.2E-10 76.2 5.2 54 272-329 190-243 (449)
227 2x8g_A Thioredoxin glutathione 97.8 1E-05 3.5E-10 79.6 4.6 35 55-89 105-139 (598)
228 1cjc_A Protein (adrenodoxin re 97.8 1.4E-05 4.7E-10 75.9 5.3 41 56-96 5-47 (460)
229 3dgz_A Thioredoxin reductase 2 97.8 0.00022 7.5E-09 68.2 13.3 51 278-329 231-286 (488)
230 1kdg_A CDH, cellobiose dehydro 97.8 1.7E-05 5.9E-10 77.1 5.1 59 276-335 199-266 (546)
231 2zbw_A Thioredoxin reductase; 97.7 0.00023 8E-09 64.2 11.9 34 57-90 152-185 (335)
232 2gqw_A Ferredoxin reductase; f 97.7 2.3E-05 8E-10 73.2 5.3 38 56-93 6-45 (408)
233 3ab1_A Ferredoxin--NADP reduct 97.7 0.00021 7.1E-09 65.4 10.6 34 57-90 163-196 (360)
234 3qfa_A Thioredoxin reductase 1 97.6 0.00048 1.7E-08 66.4 12.6 31 58-88 211-241 (519)
235 2v3a_A Rubredoxin reductase; a 97.6 4.1E-05 1.4E-09 70.9 4.8 34 57-90 4-39 (384)
236 3uox_A Otemo; baeyer-villiger 97.6 0.00078 2.7E-08 65.3 13.5 49 276-331 342-392 (545)
237 3d1c_A Flavin-containing putat 97.6 0.00031 1.1E-08 64.3 10.2 34 57-90 166-199 (369)
238 2x8g_A Thioredoxin glutathione 97.6 0.00067 2.3E-08 66.6 12.9 32 58-89 287-318 (598)
239 3cty_A Thioredoxin reductase; 97.6 0.00068 2.3E-08 60.8 11.9 33 57-89 155-187 (319)
240 3gwf_A Cyclohexanone monooxyge 97.5 0.00099 3.4E-08 64.5 13.4 36 56-91 177-212 (540)
241 2q0l_A TRXR, thioredoxin reduc 97.5 0.0013 4.3E-08 58.7 12.6 34 57-90 143-176 (311)
242 1fl2_A Alkyl hydroperoxide red 97.5 0.0013 4.5E-08 58.5 12.4 34 57-90 144-177 (310)
243 3l8k_A Dihydrolipoyl dehydroge 97.4 0.00068 2.3E-08 64.4 9.9 34 57-90 172-205 (466)
244 1gpe_A Protein (glucose oxidas 97.3 0.00017 5.8E-09 70.6 4.6 37 56-92 23-60 (587)
245 1cjc_A Protein (adrenodoxin re 97.3 0.004 1.4E-07 58.9 13.7 45 285-329 270-332 (460)
246 2gag_A Heterotetrameric sarcos 97.2 0.001 3.5E-08 69.0 9.4 33 57-89 284-316 (965)
247 3f8d_A Thioredoxin reductase ( 97.2 0.0039 1.3E-07 55.6 12.2 33 57-89 154-186 (323)
248 3lzw_A Ferredoxin--NADP reduct 97.1 0.003 1E-07 56.6 10.4 33 57-89 154-186 (332)
249 3klj_A NAD(FAD)-dependent dehy 97.0 0.00022 7.7E-09 65.9 2.6 38 57-94 146-183 (385)
250 4gcm_A TRXR, thioredoxin reduc 97.0 0.00059 2E-08 61.0 5.3 37 57-93 145-181 (312)
251 1o94_A Tmadh, trimethylamine d 97.0 0.0023 8E-08 64.2 9.4 35 56-90 527-563 (729)
252 3fwz_A Inner membrane protein 96.9 0.0016 5.6E-08 50.7 5.9 37 55-91 5-41 (140)
253 2g1u_A Hypothetical protein TM 96.9 0.0015 5E-08 51.9 5.7 40 52-91 14-53 (155)
254 3ef6_A Toluene 1,2-dioxygenase 96.8 0.0011 3.9E-08 61.7 5.5 39 56-94 142-180 (410)
255 4a5l_A Thioredoxin reductase; 96.8 0.00033 1.1E-08 62.6 1.8 36 56-91 151-186 (314)
256 1lss_A TRK system potassium up 96.6 0.0023 7.7E-08 49.5 4.9 34 57-90 4-37 (140)
257 3fg2_P Putative rubredoxin red 96.4 0.0029 1E-07 58.8 5.2 38 57-94 142-179 (404)
258 3lxd_A FAD-dependent pyridine 96.4 0.0032 1.1E-07 58.8 5.2 38 57-94 152-189 (415)
259 3llv_A Exopolyphosphatase-rela 96.4 0.0039 1.3E-07 48.4 4.9 34 57-90 6-39 (141)
260 2eq6_A Pyruvate dehydrogenase 96.3 0.0041 1.4E-07 58.9 5.5 37 57-93 169-205 (464)
261 1q1r_A Putidaredoxin reductase 96.3 0.0019 6.5E-08 60.6 3.0 37 57-93 149-185 (431)
262 4eqs_A Coenzyme A disulfide re 96.2 0.0058 2E-07 57.4 6.2 37 57-93 147-183 (437)
263 3ntd_A FAD-dependent pyridine 96.2 0.0032 1.1E-07 61.2 4.3 37 57-93 151-187 (565)
264 3oc4_A Oxidoreductase, pyridin 96.2 0.0043 1.5E-07 58.6 5.1 37 57-93 147-183 (452)
265 3ic5_A Putative saccharopine d 96.2 0.0051 1.7E-07 45.8 4.6 34 57-90 5-39 (118)
266 2yqu_A 2-oxoglutarate dehydrog 96.2 0.0051 1.7E-07 58.1 5.5 36 57-92 167-202 (455)
267 1zk7_A HGII, reductase, mercur 96.1 0.0054 1.8E-07 58.2 5.4 37 57-93 176-212 (467)
268 1id1_A Putative potassium chan 96.1 0.0082 2.8E-07 47.4 5.6 33 57-89 3-35 (153)
269 1ges_A Glutathione reductase; 96.0 0.007 2.4E-07 57.1 5.5 37 57-93 167-203 (450)
270 3c85_A Putative glutathione-re 95.8 0.0089 3E-07 48.7 4.8 35 56-90 38-73 (183)
271 2r9z_A Glutathione amide reduc 95.8 0.0094 3.2E-07 56.4 5.5 37 57-93 166-202 (463)
272 3ado_A Lambda-crystallin; L-gu 95.8 0.0086 2.9E-07 53.4 4.8 35 56-90 5-39 (319)
273 3iwa_A FAD-dependent pyridine 95.8 0.0084 2.9E-07 56.9 5.1 38 56-93 158-196 (472)
274 4b1b_A TRXR, thioredoxin reduc 95.7 0.0092 3.1E-07 57.6 5.2 36 57-92 223-258 (542)
275 2hmt_A YUAA protein; RCK, KTN, 95.7 0.01 3.5E-07 45.9 4.6 33 58-90 7-39 (144)
276 2x5o_A UDP-N-acetylmuramoylala 95.7 0.0091 3.1E-07 56.1 4.7 37 57-93 5-41 (439)
277 3lk7_A UDP-N-acetylmuramoylala 95.6 0.011 3.9E-07 55.6 5.2 35 56-90 8-42 (451)
278 3l4b_C TRKA K+ channel protien 95.6 0.0098 3.4E-07 50.0 4.3 34 58-91 1-34 (218)
279 3e8x_A Putative NAD-dependent 95.6 0.014 4.8E-07 49.5 5.4 35 56-90 20-55 (236)
280 2hqm_A GR, grase, glutathione 95.6 0.013 4.5E-07 55.7 5.5 37 57-93 185-221 (479)
281 1onf_A GR, grase, glutathione 95.5 0.012 4.2E-07 56.2 5.2 37 57-93 176-212 (500)
282 2xve_A Flavin-containing monoo 95.4 0.019 6.4E-07 54.4 5.8 37 56-92 196-232 (464)
283 1f0y_A HCDH, L-3-hydroxyacyl-C 95.4 0.018 6.2E-07 51.1 5.4 34 57-90 15-48 (302)
284 2y0c_A BCEC, UDP-glucose dehyd 95.3 0.016 5.5E-07 54.9 5.1 35 56-90 7-41 (478)
285 3ics_A Coenzyme A-disulfide re 95.3 0.022 7.6E-07 55.6 6.1 37 57-93 187-223 (588)
286 1xdi_A RV3303C-LPDA; reductase 95.3 0.017 5.7E-07 55.3 5.1 37 57-93 182-218 (499)
287 3i83_A 2-dehydropantoate 2-red 95.1 0.02 7E-07 51.2 5.0 33 58-90 3-35 (320)
288 3urh_A Dihydrolipoyl dehydroge 95.1 0.019 6.6E-07 54.7 5.1 37 57-93 198-234 (491)
289 4e12_A Diketoreductase; oxidor 95.1 0.02 6.9E-07 50.2 4.8 33 58-90 5-37 (283)
290 3dk9_A Grase, GR, glutathione 95.1 0.024 8.1E-07 53.8 5.5 37 57-93 187-223 (478)
291 2dpo_A L-gulonate 3-dehydrogen 95.0 0.023 7.7E-07 50.8 4.8 34 57-90 6-39 (319)
292 1vdc_A NTR, NADPH dependent th 95.0 0.021 7.1E-07 51.2 4.7 36 56-91 158-193 (333)
293 4ap3_A Steroid monooxygenase; 95.0 0.02 6.7E-07 55.5 4.7 36 56-91 190-225 (549)
294 1pzg_A LDH, lactate dehydrogen 95.0 0.03 1E-06 50.3 5.6 35 56-90 8-43 (331)
295 3hn2_A 2-dehydropantoate 2-red 95.0 0.021 7.3E-07 50.9 4.6 33 58-90 3-35 (312)
296 4dio_A NAD(P) transhydrogenase 94.9 0.028 9.7E-07 51.6 5.4 35 56-90 189-223 (405)
297 2q7v_A Thioredoxin reductase; 94.9 0.023 7.7E-07 50.8 4.7 35 57-91 152-186 (325)
298 1trb_A Thioredoxin reductase; 94.9 0.023 7.8E-07 50.5 4.7 37 56-92 144-180 (320)
299 2wpf_A Trypanothione reductase 94.9 0.026 8.7E-07 53.9 5.2 37 57-93 191-230 (495)
300 2a87_A TRXR, TR, thioredoxin r 94.9 0.023 7.9E-07 51.0 4.7 36 56-91 154-189 (335)
301 3vtf_A UDP-glucose 6-dehydroge 94.9 0.027 9.2E-07 52.5 5.2 36 55-90 19-54 (444)
302 1kyq_A Met8P, siroheme biosynt 94.8 0.019 6.5E-07 49.9 3.8 35 56-90 12-46 (274)
303 1fec_A Trypanothione reductase 94.8 0.028 9.4E-07 53.6 5.2 37 57-93 187-226 (490)
304 1ks9_A KPA reductase;, 2-dehyd 94.8 0.03 1E-06 49.1 5.1 33 59-91 2-34 (291)
305 2raf_A Putative dinucleotide-b 94.8 0.033 1.1E-06 46.4 5.1 36 56-91 18-53 (209)
306 3k6j_A Protein F01G10.3, confi 94.8 0.037 1.3E-06 51.9 5.8 35 57-91 54-88 (460)
307 3lad_A Dihydrolipoamide dehydr 94.8 0.037 1.3E-06 52.5 5.9 37 57-93 180-216 (476)
308 3dfz_A SIRC, precorrin-2 dehyd 94.7 0.029 9.8E-07 47.2 4.5 34 56-89 30-63 (223)
309 2gv8_A Monooxygenase; FMO, FAD 94.7 0.024 8.3E-07 53.2 4.6 37 56-92 211-248 (447)
310 3p2y_A Alanine dehydrogenase/p 94.7 0.03 1E-06 51.0 4.9 35 56-90 183-217 (381)
311 4a7p_A UDP-glucose dehydrogena 94.7 0.035 1.2E-06 52.0 5.4 36 56-91 7-42 (446)
312 3gg2_A Sugar dehydrogenase, UD 94.7 0.028 9.5E-07 52.8 4.8 33 58-90 3-35 (450)
313 1lld_A L-lactate dehydrogenase 94.7 0.031 1.1E-06 49.9 4.9 34 57-90 7-42 (319)
314 3eag_A UDP-N-acetylmuramate:L- 94.6 0.037 1.3E-06 49.6 5.4 35 57-91 4-39 (326)
315 3doj_A AT3G25530, dehydrogenas 94.6 0.044 1.5E-06 48.8 5.6 36 56-91 20-55 (310)
316 2vdc_G Glutamate synthase [NAD 94.5 0.042 1.4E-06 51.8 5.7 36 56-91 263-299 (456)
317 3g17_A Similar to 2-dehydropan 94.5 0.031 1.1E-06 49.3 4.4 33 58-90 3-35 (294)
318 3itj_A Thioredoxin reductase 1 94.5 0.033 1.1E-06 49.7 4.7 37 56-92 172-208 (338)
319 1zej_A HBD-9, 3-hydroxyacyl-CO 94.5 0.036 1.2E-06 48.8 4.7 34 56-90 11-44 (293)
320 1mo9_A ORF3; nucleotide bindin 94.4 0.039 1.3E-06 53.0 5.3 36 58-93 215-250 (523)
321 2ew2_A 2-dehydropantoate 2-red 94.4 0.036 1.2E-06 49.2 4.8 33 58-90 4-36 (316)
322 3g79_A NDP-N-acetyl-D-galactos 94.4 0.042 1.4E-06 51.8 5.3 36 56-91 17-54 (478)
323 2a9f_A Putative malic enzyme ( 94.4 0.04 1.4E-06 50.1 4.8 36 55-90 186-222 (398)
324 4g65_A TRK system potassium up 94.3 0.018 6.3E-07 54.3 2.6 36 56-91 2-37 (461)
325 3dgh_A TRXR-1, thioredoxin red 94.3 0.054 1.8E-06 51.4 5.9 34 57-90 187-220 (483)
326 3dtt_A NADP oxidoreductase; st 94.3 0.049 1.7E-06 46.6 5.1 36 56-91 18-53 (245)
327 3ghy_A Ketopantoate reductase 94.3 0.045 1.5E-06 49.3 5.1 33 57-89 3-35 (335)
328 3pef_A 6-phosphogluconate dehy 94.3 0.049 1.7E-06 47.8 5.2 34 58-91 2-35 (287)
329 4dll_A 2-hydroxy-3-oxopropiona 94.3 0.045 1.5E-06 49.0 5.0 35 56-90 30-64 (320)
330 2hjr_A Malate dehydrogenase; m 94.3 0.052 1.8E-06 48.7 5.4 34 57-90 14-48 (328)
331 3hwr_A 2-dehydropantoate 2-red 94.3 0.042 1.4E-06 49.1 4.8 34 56-90 18-51 (318)
332 1mv8_A GMD, GDP-mannose 6-dehy 94.2 0.036 1.2E-06 51.9 4.5 33 58-90 1-33 (436)
333 3k96_A Glycerol-3-phosphate de 94.2 0.043 1.5E-06 49.8 4.8 35 56-90 28-62 (356)
334 1hyu_A AHPF, alkyl hydroperoxi 94.2 0.04 1.4E-06 52.9 4.7 36 56-91 354-389 (521)
335 2v6b_A L-LDH, L-lactate dehydr 94.1 0.048 1.6E-06 48.4 4.8 33 58-90 1-35 (304)
336 3g0o_A 3-hydroxyisobutyrate de 94.1 0.05 1.7E-06 48.2 4.9 35 56-90 6-40 (303)
337 3ego_A Probable 2-dehydropanto 94.1 0.048 1.6E-06 48.5 4.7 33 57-90 2-34 (307)
338 2vns_A Metalloreductase steap3 94.1 0.054 1.9E-06 45.3 4.8 35 56-90 27-61 (215)
339 3pid_A UDP-glucose 6-dehydroge 94.0 0.045 1.5E-06 50.9 4.6 35 55-90 34-68 (432)
340 1z82_A Glycerol-3-phosphate de 94.0 0.051 1.7E-06 48.9 4.9 35 56-90 13-47 (335)
341 1zcj_A Peroxisomal bifunctiona 94.0 0.054 1.9E-06 51.1 5.2 34 57-90 37-70 (463)
342 1vl6_A Malate oxidoreductase; 94.0 0.056 1.9E-06 49.1 4.9 35 56-90 191-226 (388)
343 3fbs_A Oxidoreductase; structu 93.9 0.13 4.6E-06 44.7 7.3 61 262-329 165-225 (297)
344 2ewd_A Lactate dehydrogenase,; 93.9 0.059 2E-06 48.1 4.9 34 57-90 4-38 (317)
345 3oj0_A Glutr, glutamyl-tRNA re 93.9 0.023 7.7E-07 44.2 2.0 34 57-90 21-54 (144)
346 3l9w_A Glutathione-regulated p 93.9 0.055 1.9E-06 50.2 4.9 35 57-91 4-38 (413)
347 4g6h_A Rotenone-insensitive NA 93.9 0.036 1.2E-06 53.0 3.7 58 58-132 218-289 (502)
348 1x13_A NAD(P) transhydrogenase 93.8 0.066 2.3E-06 49.5 5.3 35 57-91 172-206 (401)
349 1bg6_A N-(1-D-carboxylethyl)-L 93.8 0.058 2E-06 48.9 4.9 33 58-90 5-37 (359)
350 3r9u_A Thioredoxin reductase; 93.7 0.067 2.3E-06 47.2 5.1 35 57-91 147-181 (315)
351 4dna_A Probable glutathione re 93.7 0.071 2.4E-06 50.3 5.5 36 57-92 170-205 (463)
352 1kdg_A CDH, cellobiose dehydro 93.7 0.083 2.8E-06 51.0 6.0 37 56-92 6-42 (546)
353 1txg_A Glycerol-3-phosphate de 93.7 0.052 1.8E-06 48.7 4.2 30 59-88 2-31 (335)
354 3o0h_A Glutathione reductase; 93.6 0.075 2.6E-06 50.4 5.5 37 57-93 191-227 (484)
355 1t2d_A LDH-P, L-lactate dehydr 93.6 0.087 3E-06 47.1 5.5 34 57-90 4-38 (322)
356 1guz_A Malate dehydrogenase; o 93.5 0.077 2.6E-06 47.2 5.1 33 58-90 1-35 (310)
357 1jay_A Coenzyme F420H2:NADP+ o 93.5 0.071 2.4E-06 44.3 4.6 32 59-90 2-34 (212)
358 1l7d_A Nicotinamide nucleotide 93.5 0.086 2.9E-06 48.4 5.4 35 56-90 171-205 (384)
359 1dlj_A UDP-glucose dehydrogena 93.4 0.05 1.7E-06 50.4 3.8 32 58-90 1-32 (402)
360 3qha_A Putative oxidoreductase 93.4 0.058 2E-06 47.6 4.0 35 57-91 15-49 (296)
361 3mog_A Probable 3-hydroxybutyr 93.4 0.067 2.3E-06 50.7 4.6 34 57-90 5-38 (483)
362 3pdu_A 3-hydroxyisobutyrate de 93.4 0.063 2.2E-06 47.1 4.2 34 58-91 2-35 (287)
363 3gvi_A Malate dehydrogenase; N 93.4 0.096 3.3E-06 46.8 5.4 35 56-90 6-41 (324)
364 3l6d_A Putative oxidoreductase 93.4 0.11 3.6E-06 46.1 5.7 35 56-90 8-42 (306)
365 1pjc_A Protein (L-alanine dehy 93.4 0.087 3E-06 47.9 5.2 34 57-90 167-200 (361)
366 2h78_A Hibadh, 3-hydroxyisobut 93.3 0.077 2.6E-06 46.9 4.7 34 57-90 3-36 (302)
367 1nyt_A Shikimate 5-dehydrogena 93.2 0.1 3.5E-06 45.4 5.3 35 56-90 118-152 (271)
368 4ffl_A PYLC; amino acid, biosy 93.2 0.099 3.4E-06 47.5 5.4 34 58-91 2-35 (363)
369 2eez_A Alanine dehydrogenase; 93.2 0.094 3.2E-06 47.9 5.2 34 57-90 166-199 (369)
370 2uyy_A N-PAC protein; long-cha 93.1 0.12 4.2E-06 45.9 5.8 35 57-91 30-64 (316)
371 4e21_A 6-phosphogluconate dehy 93.1 0.09 3.1E-06 47.7 4.9 35 56-90 21-55 (358)
372 3ew7_A LMO0794 protein; Q8Y8U8 93.1 0.11 3.8E-06 43.1 5.2 33 58-90 1-34 (221)
373 3dfu_A Uncharacterized protein 93.1 0.034 1.2E-06 47.0 1.9 34 56-89 5-38 (232)
374 1m6i_A Programmed cell death p 93.1 0.092 3.1E-06 50.0 5.1 36 57-92 180-219 (493)
375 3tl2_A Malate dehydrogenase; c 93.1 0.11 3.7E-06 46.3 5.2 33 57-89 8-41 (315)
376 3ius_A Uncharacterized conserv 93.0 0.09 3.1E-06 45.8 4.7 35 57-91 5-39 (286)
377 3gpi_A NAD-dependent epimerase 93.0 0.12 4E-06 45.1 5.4 34 57-90 3-36 (286)
378 3phh_A Shikimate dehydrogenase 93.0 0.12 4.2E-06 44.7 5.2 34 57-90 118-151 (269)
379 4ezb_A Uncharacterized conserv 93.0 0.1 3.5E-06 46.5 5.0 34 57-90 24-58 (317)
380 1a5z_A L-lactate dehydrogenase 92.9 0.082 2.8E-06 47.2 4.3 33 58-90 1-35 (319)
381 3h2s_A Putative NADH-flavin re 92.9 0.11 3.7E-06 43.4 4.9 33 58-90 1-34 (224)
382 1ur5_A Malate dehydrogenase; o 92.9 0.12 4E-06 46.0 5.2 33 58-90 3-36 (309)
383 2f1k_A Prephenate dehydrogenas 92.9 0.1 3.4E-06 45.5 4.8 32 59-90 2-33 (279)
384 4b4o_A Epimerase family protei 92.9 0.13 4.5E-06 45.2 5.6 34 58-91 1-35 (298)
385 1jw9_B Molybdopterin biosynthe 92.9 0.1 3.5E-06 44.8 4.6 35 57-91 31-66 (249)
386 2o3j_A UDP-glucose 6-dehydroge 92.8 0.1 3.5E-06 49.5 5.0 34 57-90 9-44 (481)
387 3ldh_A Lactate dehydrogenase; 92.8 0.16 5.4E-06 45.4 5.9 35 56-90 20-56 (330)
388 4huj_A Uncharacterized protein 92.8 0.07 2.4E-06 44.8 3.4 34 57-90 23-57 (220)
389 1oju_A MDH, malate dehydrogena 92.7 0.094 3.2E-06 46.2 4.3 33 58-90 1-35 (294)
390 3ggo_A Prephenate dehydrogenas 92.7 0.14 4.8E-06 45.6 5.5 34 57-90 33-68 (314)
391 1yqg_A Pyrroline-5-carboxylate 92.7 0.097 3.3E-06 45.1 4.3 32 59-90 2-34 (263)
392 2vhw_A Alanine dehydrogenase; 92.7 0.12 4.3E-06 47.2 5.2 35 56-90 167-201 (377)
393 1y6j_A L-lactate dehydrogenase 92.7 0.12 4.1E-06 46.1 5.0 34 57-90 7-42 (318)
394 1gte_A Dihydropyrimidine dehyd 92.6 0.099 3.4E-06 54.6 5.0 34 57-90 332-366 (1025)
395 1hyh_A L-hicdh, L-2-hydroxyiso 92.6 0.095 3.3E-06 46.5 4.3 33 58-90 2-36 (309)
396 3ktd_A Prephenate dehydrogenas 92.6 0.13 4.3E-06 46.4 5.1 35 56-90 7-41 (341)
397 4a9w_A Monooxygenase; baeyer-v 92.6 0.098 3.3E-06 47.0 4.4 33 56-89 162-194 (357)
398 3ojo_A CAP5O; rossmann fold, c 92.5 0.1 3.5E-06 48.5 4.4 36 56-91 10-45 (431)
399 2qyt_A 2-dehydropantoate 2-red 92.5 0.087 3E-06 46.8 3.8 32 58-89 9-46 (317)
400 1p77_A Shikimate 5-dehydrogena 92.5 0.11 3.8E-06 45.2 4.4 35 56-90 118-152 (272)
401 3qsg_A NAD-binding phosphogluc 92.4 0.11 3.9E-06 46.1 4.5 34 56-89 23-57 (312)
402 2pv7_A T-protein [includes: ch 92.4 0.14 4.8E-06 45.1 5.0 34 57-90 21-55 (298)
403 1evy_A Glycerol-3-phosphate de 92.3 0.065 2.2E-06 48.8 2.8 32 59-90 17-48 (366)
404 1vpd_A Tartronate semialdehyde 92.3 0.12 4.2E-06 45.4 4.5 33 58-90 6-38 (299)
405 3pqe_A L-LDH, L-lactate dehydr 92.3 0.15 5.2E-06 45.5 5.1 34 57-90 5-40 (326)
406 3p7m_A Malate dehydrogenase; p 92.2 0.17 5.9E-06 45.1 5.4 34 57-90 5-39 (321)
407 2gf2_A Hibadh, 3-hydroxyisobut 92.2 0.14 4.6E-06 45.1 4.7 32 59-90 2-33 (296)
408 2egg_A AROE, shikimate 5-dehyd 92.2 0.15 5.1E-06 45.0 4.9 35 56-90 140-175 (297)
409 2wtb_A MFP2, fatty acid multif 92.2 0.13 4.5E-06 51.3 5.1 34 57-90 312-345 (725)
410 3cky_A 2-hydroxymethyl glutara 92.2 0.14 4.6E-06 45.2 4.7 34 57-90 4-37 (301)
411 2q3e_A UDP-glucose 6-dehydroge 92.2 0.12 4.3E-06 48.7 4.6 33 58-90 6-40 (467)
412 1pjq_A CYSG, siroheme synthase 92.1 0.14 4.8E-06 48.1 4.9 34 56-89 11-44 (457)
413 3c24_A Putative oxidoreductase 92.1 0.14 5E-06 44.7 4.7 33 58-90 12-45 (286)
414 4aj2_A L-lactate dehydrogenase 92.1 0.21 7.1E-06 44.7 5.7 36 55-90 17-54 (331)
415 3nep_X Malate dehydrogenase; h 92.1 0.14 4.9E-06 45.4 4.6 33 58-90 1-35 (314)
416 1lqt_A FPRA; NADP+ derivative, 92.0 0.15 5.1E-06 48.0 5.0 36 56-91 146-202 (456)
417 1hdo_A Biliverdin IX beta redu 92.0 0.19 6.7E-06 41.0 5.2 33 58-90 4-37 (206)
418 2g5c_A Prephenate dehydrogenas 92.0 0.15 5.2E-06 44.4 4.8 33 58-90 2-36 (281)
419 2aef_A Calcium-gated potassium 92.0 0.068 2.3E-06 45.3 2.4 35 56-91 8-42 (234)
420 4gwg_A 6-phosphogluconate dehy 92.0 0.16 5.4E-06 48.0 5.1 34 57-90 4-37 (484)
421 2i6t_A Ubiquitin-conjugating e 91.9 0.15 5.3E-06 45.0 4.7 34 57-90 14-49 (303)
422 2rir_A Dipicolinate synthase, 91.8 0.21 7E-06 44.1 5.4 35 56-90 156-190 (300)
423 2qrj_A Saccharopine dehydrogen 91.8 0.16 5.6E-06 46.2 4.8 40 56-95 213-257 (394)
424 2p4q_A 6-phosphogluconate dehy 91.7 0.18 6.2E-06 47.9 5.2 35 56-90 9-43 (497)
425 2zyd_A 6-phosphogluconate dehy 91.7 0.14 4.7E-06 48.5 4.3 35 56-90 14-48 (480)
426 3ond_A Adenosylhomocysteinase; 91.6 0.18 6.2E-06 47.3 5.0 35 56-90 264-298 (488)
427 2izz_A Pyrroline-5-carboxylate 91.6 0.18 6E-06 45.1 4.8 35 56-90 21-59 (322)
428 3d4o_A Dipicolinate synthase s 91.6 0.23 7.7E-06 43.7 5.4 35 56-90 154-188 (293)
429 4id9_A Short-chain dehydrogena 91.6 0.19 6.4E-06 45.1 5.0 37 55-91 17-54 (347)
430 3k30_A Histamine dehydrogenase 91.6 0.22 7.5E-06 49.6 5.9 37 56-92 522-560 (690)
431 3vku_A L-LDH, L-lactate dehydr 91.6 0.18 6.2E-06 45.0 4.8 35 56-90 8-44 (326)
432 1wdk_A Fatty oxidation complex 91.5 0.16 5.6E-06 50.6 4.8 34 57-90 314-347 (715)
433 2cvz_A Dehydrogenase, 3-hydrox 91.5 0.16 5.3E-06 44.4 4.3 32 58-90 2-33 (289)
434 1yj8_A Glycerol-3-phosphate de 91.5 0.12 4.2E-06 47.2 3.7 34 58-91 22-62 (375)
435 1pgj_A 6PGDH, 6-PGDH, 6-phosph 91.5 0.16 5.6E-06 48.0 4.6 33 58-90 2-34 (478)
436 2hk9_A Shikimate dehydrogenase 91.5 0.18 6.1E-06 43.9 4.6 35 56-90 128-162 (275)
437 1x0v_A GPD-C, GPDH-C, glycerol 91.4 0.11 3.6E-06 47.1 3.2 35 57-91 8-49 (354)
438 1y1p_A ARII, aldehyde reductas 91.4 0.34 1.1E-05 43.2 6.5 36 55-90 9-45 (342)
439 3gt0_A Pyrroline-5-carboxylate 91.4 0.21 7.3E-06 42.6 4.9 33 58-90 3-39 (247)
440 2pgd_A 6-phosphogluconate dehy 91.4 0.19 6.5E-06 47.7 4.9 33 58-90 3-35 (482)
441 2rcy_A Pyrroline carboxylate r 91.3 0.18 6.2E-06 43.4 4.4 35 57-91 4-42 (262)
442 3tnl_A Shikimate dehydrogenase 91.2 0.27 9.3E-06 43.6 5.4 34 56-89 153-187 (315)
443 3don_A Shikimate dehydrogenase 91.2 0.19 6.5E-06 43.7 4.4 35 56-90 116-151 (277)
444 1edz_A 5,10-methylenetetrahydr 91.1 0.21 7.2E-06 44.2 4.7 34 56-89 176-210 (320)
445 2ahr_A Putative pyrroline carb 91.1 0.17 5.9E-06 43.4 4.1 33 58-90 4-36 (259)
446 3fbt_A Chorismate mutase and s 91.1 0.27 9.2E-06 42.9 5.2 35 56-90 121-156 (282)
447 1np3_A Ketol-acid reductoisome 91.0 0.25 8.4E-06 44.5 5.1 34 57-90 16-49 (338)
448 3c7a_A Octopine dehydrogenase; 91.0 0.1 3.6E-06 48.2 2.7 30 58-87 3-33 (404)
449 3fi9_A Malate dehydrogenase; s 91.0 0.34 1.2E-05 43.5 6.0 35 56-90 7-44 (343)
450 3u62_A Shikimate dehydrogenase 91.0 0.27 9.2E-06 42.2 5.1 32 59-90 110-142 (253)
451 3jyo_A Quinate/shikimate dehyd 90.9 0.29 1E-05 42.7 5.3 35 56-90 126-161 (283)
452 1w4x_A Phenylacetone monooxyge 90.8 0.21 7.3E-06 48.1 4.8 35 56-90 185-219 (542)
453 1mld_A Malate dehydrogenase; o 90.8 0.23 7.8E-06 44.2 4.7 33 58-90 1-36 (314)
454 1yb4_A Tartronic semialdehyde 90.8 0.17 5.7E-06 44.4 3.8 32 58-90 4-35 (295)
455 3tri_A Pyrroline-5-carboxylate 90.8 0.3 1E-05 42.6 5.3 34 57-90 3-39 (280)
456 1ldn_A L-lactate dehydrogenase 90.8 0.29 9.8E-06 43.6 5.3 34 57-90 6-41 (316)
457 3d1l_A Putative NADP oxidoredu 90.8 0.2 6.9E-06 43.2 4.2 34 57-90 10-44 (266)
458 3pwz_A Shikimate dehydrogenase 90.8 0.31 1E-05 42.3 5.3 35 56-90 119-154 (272)
459 2pzm_A Putative nucleotide sug 90.7 0.31 1E-05 43.5 5.5 35 56-90 19-54 (330)
460 1i36_A Conserved hypothetical 90.7 0.22 7.4E-06 42.9 4.3 30 59-88 2-31 (264)
461 3dqp_A Oxidoreductase YLBE; al 90.7 0.23 8E-06 41.2 4.4 33 59-91 2-35 (219)
462 4gbj_A 6-phosphogluconate dehy 90.6 0.22 7.4E-06 43.9 4.3 34 57-90 5-38 (297)
463 3dhn_A NAD-dependent epimerase 90.6 0.25 8.4E-06 41.3 4.5 34 58-91 5-39 (227)
464 3vps_A TUNA, NAD-dependent epi 90.6 0.3 1E-05 43.1 5.3 36 56-91 6-42 (321)
465 3gvp_A Adenosylhomocysteinase 90.6 0.27 9.4E-06 45.3 5.0 35 56-90 219-253 (435)
466 3hyw_A Sulfide-quinone reducta 90.5 0.16 5.5E-06 47.3 3.6 52 273-328 201-254 (430)
467 3o8q_A Shikimate 5-dehydrogena 90.5 0.31 1.1E-05 42.5 5.1 35 56-90 125-160 (281)
468 3ce6_A Adenosylhomocysteinase; 90.5 0.27 9.2E-06 46.5 5.0 35 56-90 273-307 (494)
469 3d0o_A L-LDH 1, L-lactate dehy 90.4 0.29 9.8E-06 43.6 5.0 33 57-89 6-40 (317)
470 1nvt_A Shikimate 5'-dehydrogen 90.3 0.23 7.7E-06 43.6 4.1 32 57-89 128-159 (287)
471 2x0j_A Malate dehydrogenase; o 90.3 0.24 8.3E-06 43.4 4.3 33 58-90 1-35 (294)
472 2d5c_A AROE, shikimate 5-dehyd 90.3 0.32 1.1E-05 41.9 5.0 32 59-90 118-149 (263)
473 3zwc_A Peroxisomal bifunctiona 90.3 0.36 1.2E-05 48.2 5.9 34 57-90 316-349 (742)
474 1leh_A Leucine dehydrogenase; 90.2 0.33 1.1E-05 44.0 5.2 34 56-89 172-205 (364)
475 1lu9_A Methylene tetrahydromet 90.2 0.37 1.3E-05 42.1 5.4 35 56-90 118-153 (287)
476 3t4e_A Quinate/shikimate dehyd 90.2 0.37 1.3E-05 42.6 5.4 34 56-89 147-181 (312)
477 4hv4_A UDP-N-acetylmuramate--L 90.2 0.23 7.8E-06 47.2 4.3 35 56-90 21-56 (494)
478 1zud_1 Adenylyltransferase THI 90.1 0.36 1.2E-05 41.3 5.1 35 57-91 28-63 (251)
479 2zqz_A L-LDH, L-lactate dehydr 90.0 0.35 1.2E-05 43.2 5.1 36 55-90 7-44 (326)
480 3ko8_A NAD-dependent epimerase 89.9 0.34 1.2E-05 42.6 5.1 33 58-90 1-34 (312)
481 1smk_A Malate dehydrogenase, g 89.9 0.27 9.1E-06 44.0 4.3 35 56-90 7-44 (326)
482 2dbq_A Glyoxylate reductase; D 89.9 0.38 1.3E-05 43.1 5.3 36 56-91 149-184 (334)
483 3q2o_A Phosphoribosylaminoimid 89.8 0.51 1.7E-05 43.2 6.3 36 56-91 13-48 (389)
484 2iz1_A 6-phosphogluconate dehy 89.8 0.29 9.8E-06 46.3 4.6 34 57-90 5-38 (474)
485 3rui_A Ubiquitin-like modifier 89.8 0.41 1.4E-05 42.8 5.3 37 56-92 33-70 (340)
486 1gpj_A Glutamyl-tRNA reductase 89.5 0.31 1.1E-05 45.0 4.6 35 56-90 166-201 (404)
487 1npy_A Hypothetical shikimate 89.5 0.39 1.3E-05 41.6 4.9 33 57-89 119-152 (271)
488 3rkr_A Short chain oxidoreduct 89.5 0.44 1.5E-05 40.9 5.2 35 56-90 28-63 (262)
489 3h8v_A Ubiquitin-like modifier 89.4 0.35 1.2E-05 42.3 4.6 37 56-92 35-72 (292)
490 3i6i_A Putative leucoanthocyan 89.4 0.4 1.4E-05 43.0 5.1 34 57-90 10-44 (346)
491 1ez4_A Lactate dehydrogenase; 89.3 0.36 1.2E-05 42.9 4.7 34 57-90 5-40 (318)
492 2x4g_A Nucleoside-diphosphate- 89.3 0.47 1.6E-05 42.3 5.5 34 57-90 13-47 (342)
493 2z1m_A GDP-D-mannose dehydrata 89.3 0.43 1.5E-05 42.6 5.2 34 57-90 3-37 (345)
494 2dvm_A Malic enzyme, 439AA lon 89.2 0.4 1.4E-05 44.5 5.0 32 56-87 185-219 (439)
495 2d4a_B Malate dehydrogenase; a 89.2 0.34 1.2E-05 42.9 4.4 32 59-90 1-33 (308)
496 3orq_A N5-carboxyaminoimidazol 89.1 0.82 2.8E-05 41.7 7.1 36 56-91 11-46 (377)
497 3b1f_A Putative prephenate deh 89.1 0.37 1.3E-05 42.1 4.6 34 57-90 6-41 (290)
498 3h9u_A Adenosylhomocysteinase; 89.1 0.42 1.4E-05 44.2 5.0 35 56-90 210-244 (436)
499 2gcg_A Glyoxylate reductase/hy 89.1 0.41 1.4E-05 42.9 4.9 35 56-90 154-188 (330)
500 3ruf_A WBGU; rossmann fold, UD 89.1 0.49 1.7E-05 42.4 5.5 36 56-91 24-60 (351)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.96 E-value=1e-27 Score=227.74 Aligned_cols=292 Identities=19% Similarity=0.313 Sum_probs=203.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeec--cCCccHHHHHHHhCCCcccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFF--GAYPNIQNLFGELGINDRLQ 135 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~--~~~~~~~~l~~~~gl~~~~~ 135 (381)
+||+|||||++||+||++|+++|++|+|+|+++.+||++.++. .+|+.+|.|++.+. ..+..+.++++++|++....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIV 79 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEE
Confidence 5899999999999999999999999999999999999998876 67899999975543 33456899999999876543
Q ss_pred eeecceeee-cCCCCCcc----ccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHH
Q 016871 136 WKEHSMIFA-MPNKPGEF----SRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (381)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (381)
......... .......+ ..+.+.. ......+.++......+..... ...+..++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~ 139 (425)
T 3ka7_A 80 RSEMTTVRVPLKKGNPDYVKGFKDISFND--------------FPSLLSYKDRMKIALLIVSTRK------NRPSGSSLQ 139 (425)
T ss_dssp ECCCCEEEEESSTTCCSSTTCEEEEEGGG--------------GGGGSCHHHHHHHHHHHHHTTT------SCCCSSBHH
T ss_pred ecCCceEEeecCCCcccccccccceehhh--------------hhhhCCHHHHHHHHHHHHhhhh------cCCCCCCHH
Confidence 332111111 11100000 0000000 0112233333332222111100 122457899
Q ss_pred HHHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhcccCCCceEEecCCcCccchHHHHHHHHhcCCEEE
Q 016871 211 EWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVR 290 (381)
Q Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~l~~~G~~i~ 290 (381)
+|+++. +.++..+.++.++....+..+++.++.......+..... .+. ..++.+| ++.++++|.+.++++|++|+
T Consensus 140 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~-~~~~~gG-~~~l~~~l~~~~~~~G~~i~ 214 (425)
T 3ka7_A 140 AWIKSQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR--FGG-TGIPEGG-CKGIIDALETVISANGGKIH 214 (425)
T ss_dssp HHHHHH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTS-HHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh--cCC-ccccCCC-HHHHHHHHHHHHHHcCCEEE
Confidence 999887 556777778888777777788888888766655554321 222 2345555 78999999999999999999
Q ss_pred ecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcc-c--chHHHHHhccCCCCCEEEEEEEEecCC
Q 016871 291 LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW-K--EMAYFKRLEKLVGVPVINIHIWFDRKL 367 (381)
Q Consensus 291 ~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~-~--~~~~~~~~~~l~~~~~~~v~l~~~~~~ 367 (381)
++++|++|..+ ++.+++|++. |+++.||+||+|+|++.+..|+++.. . +..+.+.++++.+.+.++++++|+++.
T Consensus 215 ~~~~V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 292 (425)
T 3ka7_A 215 TGQEVSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPL 292 (425)
T ss_dssp CSCCEEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCS
T ss_pred ECCceeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCc
Confidence 99999999984 4556667775 77899999999999999999997532 2 566778889999999999999999997
Q ss_pred CCCCCceeecc
Q 016871 368 KNTYDHLLFSR 378 (381)
Q Consensus 368 ~~~~~~~~~~~ 378 (381)
+ .++...|..
T Consensus 293 ~-~~~~~~~~~ 302 (425)
T 3ka7_A 293 V-GHTGVLLTP 302 (425)
T ss_dssp S-CSSSEEECC
T ss_pred c-CcCEEEECC
Confidence 6 344444443
No 2
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.96 E-value=1.4e-27 Score=230.31 Aligned_cols=296 Identities=21% Similarity=0.228 Sum_probs=200.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccccCCceeeeeeCCCCCeeecceeeeccC---CccHHHHHHHhCCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGA---YPNIQNLFGELGIN 131 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~---~~~~~~l~~~~gl~ 131 (381)
.+||+|||||++||+||++|+++|+ +|+|+|+++++||++.+....+|+.+|.|++.+... +..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 3699999999999999999999999 999999999999999987656799999999987643 45678999999998
Q ss_pred cccceeec-----ceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhcccc
Q 016871 132 DRLQWKEH-----SMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDG 206 (381)
Q Consensus 132 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (381)
........ ...+... .+....+ +.... .+ +.................+.. . ....+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~--~g~~~~~--p~~~~----~~---~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~ 143 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYV--GGALHAL--PTGLR----GL---LRPSPPFSKPLFWAGLRELTK----P---RGKEPD 143 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEE--TTEEEEC--CCSSC----C------CCTTSCSCSSHHHHTTTTS----C---CCCSSC
T ss_pred ceeeecCCCCchhcceEEEE--CCEEEEC--CCChh----hc---ccccchhhhHHHHHHHHhhhc----C---CCCCCC
Confidence 65432210 0001000 1111111 00000 00 000000000000111111110 0 112345
Q ss_pred ccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhh-----------cc----------------cC
Q 016871 207 LTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL-----------QE----------------KH 259 (381)
Q Consensus 207 ~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~----------------~~ 259 (381)
.++.+|+++. +..++.+.++.++...++..++++++....+..+.... .. ..
T Consensus 144 ~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (477)
T 3nks_A 144 ETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAE 222 (477)
T ss_dssp CBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHT
T ss_pred cCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhccc
Confidence 7899999874 66778888888998888888999988876644332210 00 01
Q ss_pred CCceEEecCCcCccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcc
Q 016871 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW 339 (381)
Q Consensus 260 g~~~~~~~~~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~ 339 (381)
+....++.+| +..++++|++.+++.|++|+++++|++|..++++. +.|++.++ ++.||+||+|+|++.+..|+++.
T Consensus 223 ~~~~~~~~gG-~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~-~~v~~~~~-~~~ad~vv~a~p~~~~~~ll~~~- 298 (477)
T 3nks_A 223 RWSQWSLRGG-LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGR-WKVSLRDS-SLEADHVISAIPASVLSELLPAE- 298 (477)
T ss_dssp TCSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGC-EEEECSSC-EEEESEEEECSCHHHHHHHSCGG-
T ss_pred CccEEEECCC-HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCce-EEEEECCe-EEEcCEEEECCCHHHHHHhcccc-
Confidence 1123444544 88999999999999999999999999999855542 35766555 89999999999999999999864
Q ss_pred cchHHHHHhccCCCCCEEEEEEEEecCCCCCCCceeec
Q 016871 340 KEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFS 377 (381)
Q Consensus 340 ~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~ 377 (381)
+..+.+.+.++.+.+..+|++.|++++|. .+.++|+
T Consensus 299 -~~~~~~~l~~~~~~~~~~v~l~~~~~~~~-~~~~g~l 334 (477)
T 3nks_A 299 -AAPLARALSAITAVSVAVVNLQYQGAHLP-VQGFGHL 334 (477)
T ss_dssp -GHHHHHHHHTCCEEEEEEEEEEETTCCCS-SCSSEEE
T ss_pred -CHHHHHHHhcCCCCcEEEEEEEECCCCCC-CCCceEE
Confidence 34567888999999999999999999983 3344554
No 3
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.96 E-value=7e-28 Score=234.75 Aligned_cols=296 Identities=18% Similarity=0.220 Sum_probs=200.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCcccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~~~ 135 (381)
..+||+|||||++||+||+.|++.|++|+|+|+++++||++.+.....|+.+|.|++++.+.+..+.++++++|++....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKV 82 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceec
Confidence 35799999999999999999999999999999999999999887744589999999999877777899999999875432
Q ss_pred eeecceeeecCCCCCccccccCCCCCCCchh-----hHHHHHhcCCCCChHHHHHHhhhhhhh-hhcCcchhhccccccH
Q 016871 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLN-----GILAILRNNEMLTWPEKVKFAIGLLPA-IIGGQAYVEAQDGLTV 209 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~ 209 (381)
+.....++... +.. +.+...++.... .+..++. .+......... ...........+.+++
T Consensus 83 ~~~~~~~~~~~---g~~--~~~~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 148 (520)
T 1s3e_A 83 NEVERLIHHVK---GKS--YPFRGPFPPVWNPITYLDHNNFWR---------TMDDMGREIPSDAPWKAPLAEEWDNMTM 148 (520)
T ss_dssp CCSSEEEEEET---TEE--EEECSSSCCCCSHHHHHHHHHHHH---------HHHHHHTTSCTTCGGGSTTHHHHHTSBH
T ss_pred ccCCceEEEEC---CEE--EEecCCCCCCCCHHHHHHHHHHHH---------HHHHHHhhcCcCCCccccchhhhhccCH
Confidence 22222222111 111 111111121000 0111111 00000000000 0000011123467899
Q ss_pred HHHHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHh------hcccCCCceEEecCCcCccchHHHHHHHH
Q 016871 210 QEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQ 283 (381)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~l~~~l~~~l~ 283 (381)
.+|+++.... +..+.++..+....++.++++++.......+... +....+....++.+| .+.++++|++.+
T Consensus 149 ~~~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l- 225 (520)
T 1s3e_A 149 KELLDKLCWT-ESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG-SGQVSERIMDLL- 225 (520)
T ss_dssp HHHHHHHCSS-HHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC-THHHHHHHHHHH-
T ss_pred HHHHHhhCCC-HHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCC-HHHHHHHHHHHc-
Confidence 9999988655 4457777777777777888888887665443221 111123333455554 778888888765
Q ss_pred hcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEE
Q 016871 284 SLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWF 363 (381)
Q Consensus 284 ~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~ 363 (381)
|++|++|++|++|..++++ + .|++.+|+++.||+||+|+|++.+..|+.++..|....++++++++.+..++++.|
T Consensus 226 --g~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~ 301 (520)
T 1s3e_A 226 --GDRVKLERPVIYIDQTREN-V-LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYY 301 (520)
T ss_dssp --GGGEESSCCEEEEECSSSS-E-EEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEEC
T ss_pred --CCcEEcCCeeEEEEECCCe-E-EEEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEe
Confidence 7899999999999875444 3 38888998999999999999998888874444666777889999999999999999
Q ss_pred ecCCCCCCC
Q 016871 364 DRKLKNTYD 372 (381)
Q Consensus 364 ~~~~~~~~~ 372 (381)
++++|....
T Consensus 302 ~~~~w~~~~ 310 (520)
T 1s3e_A 302 KEPFWRKKD 310 (520)
T ss_dssp SSCGGGGGT
T ss_pred CCCcccCCC
Confidence 999986544
No 4
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.96 E-value=5.2e-27 Score=222.70 Aligned_cols=289 Identities=16% Similarity=0.244 Sum_probs=199.6
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeecc--CCccHHHHHHHhCCCcccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG--AYPNIQNLFGELGINDRLQ 135 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~--~~~~~~~l~~~~gl~~~~~ 135 (381)
+||+|||||++||+||+.|+++|++|+|+|+++.+||++.+.. .+|+.+|.|++.+.. ....+.++++++|+...+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIV 79 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEE
Confidence 4899999999999999999999999999999999999998876 578999999866542 3556899999999865432
Q ss_pred eeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHHHHHH
Q 016871 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (381)
.......+.. ++.... +.. .. ..+...+.............. ....+..++.+|+.+
T Consensus 80 ~~~~~~~~~~---~g~~~~--~~~----~~----------~~l~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~l~~ 136 (421)
T 3nrn_A 80 NSNPKGKILW---EGKIFH--YRE----SW----------KFLSVKEKAKALKLLAEIRMN----KLPKEEIPADEWIKE 136 (421)
T ss_dssp ECSSSCEEEE---TTEEEE--GGG----GG----------GGCC--------CCHHHHHTT----CCCCCCSBHHHHHHH
T ss_pred ECCCCeEEEE---CCEEEE--cCC----ch----------hhCCHhHHHHHHHHHHHHHhc----cCCCCCCCHHHHHHH
Confidence 2211111111 111111 110 00 001111111111111000000 011234789999998
Q ss_pred cCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhcccCCCceEEecCCcCccchHHHHHHHHhcCCEEEeccee
Q 016871 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 295 (381)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~l~~~G~~i~~~t~V 295 (381)
.++.++..+.++.++....++.++.+++.......+..... .+. ..++.+| +..++++|.+.++++|++|+++++|
T Consensus 137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~V 212 (421)
T 3nrn_A 137 KIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR--WGG-PGLIRGG-CKAVIDELERIIMENKGKILTRKEV 212 (421)
T ss_dssp HTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTC-HHHHHHHHHHHHHTTTCEEESSCCE
T ss_pred hcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhh--cCC-cceecCC-HHHHHHHHHHHHHHCCCEEEcCCeE
Confidence 87777778888888887777788888888766655554422 222 2455555 8899999999999999999999999
Q ss_pred eEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEEecCCCCCCCcee
Q 016871 296 QKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLL 375 (381)
Q Consensus 296 ~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~ 375 (381)
++|..+ ++.+ | +.+|+++.||+||+|+|++.+.+|++....+..+.+.+.++.+.+.+++++.++++.. ..+.+.
T Consensus 213 ~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~-~~~~~~ 287 (421)
T 3nrn_A 213 VEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPR-IGNTIV 287 (421)
T ss_dssp EEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCS-SCSSEE
T ss_pred EEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcc-cCCeEE
Confidence 999874 4433 5 4567799999999999999999999854456667788899999999999999999853 344555
Q ss_pred eccC
Q 016871 376 FSRS 379 (381)
Q Consensus 376 ~~~~ 379 (381)
|..+
T Consensus 288 ~~~~ 291 (421)
T 3nrn_A 288 FTPG 291 (421)
T ss_dssp ECTT
T ss_pred EcCC
Confidence 5544
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.96 E-value=3.1e-27 Score=227.95 Aligned_cols=288 Identities=19% Similarity=0.290 Sum_probs=201.1
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCcc
Q 016871 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (381)
Q Consensus 54 ~~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~ 133 (381)
....+||+|||||++||+||+.|++.|++|+|+|+++.+||++.+.. .+|+.+|.|++++...++.+.++++++|+...
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~ 91 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LAGYLVEQGPNSFLDREPATRALAAALNLEGR 91 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEE-ETTEEEESSCCCEETTCHHHHHHHHHTTCGGG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeec-cCCeeeecChhhhhhhhHHHHHHHHHcCCcce
Confidence 45678999999999999999999999999999999999999999877 47899999999998777889999999998754
Q ss_pred cceee--c-ceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHH
Q 016871 134 LQWKE--H-SMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (381)
Q Consensus 134 ~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (381)
..+.. . ...+.. ++.. +.+ +.. ...++.. ....+.+..+......... ....+..++.
T Consensus 92 ~~~~~~~~~~~~~~~---~g~~--~~~----p~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~s~~ 152 (478)
T 2ivd_A 92 IRAADPAAKRRYVYT---RGRL--RSV----PAS---PPAFLAS-DILPLGARLRVAGELFSRR------APEGVDESLA 152 (478)
T ss_dssp EECSCSSCCCEEEEE---TTEE--EEC----CCS---HHHHHTC-SSSCHHHHHHHHGGGGCCC------CCTTCCCBHH
T ss_pred eeecCccccceEEEE---CCEE--EEC----CCC---HHHhccC-CCCCHHHHHHHhhhhhcCC------CCCCCCCCHH
Confidence 33221 0 111111 1111 111 111 2223322 2333444433332221110 0124568999
Q ss_pred HHHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhc----------------------ccCC----CceE
Q 016871 211 EWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ----------------------EKHG----SKMA 264 (381)
Q Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g----~~~~ 264 (381)
+|+++. +.+++.+.++.++....+..++++++....+..+..+.. ...+ ..+.
T Consensus 153 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (478)
T 2ivd_A 153 AFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALS 231 (478)
T ss_dssp HHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEE
T ss_pred HHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEE
Confidence 999885 678888888888888888888888887654433322110 0111 3445
Q ss_pred EecCCcCccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEE---eCCeEEEecEEEEccCHHHHhccCCCcccc
Q 016871 265 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKE 341 (381)
Q Consensus 265 ~~~~~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t---~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~ 341 (381)
++.+| +..++++|++.+ |++|+++++|++|..++++ +.|++ .+|+++.||+||+|+|++.+..|+|+ .+
T Consensus 232 ~~~gG-~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~--~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~--l~ 303 (478)
T 2ivd_A 232 TFDGG-LQVLIDALAASL---GDAAHVGARVEGLAREDGG--WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRP--LD 303 (478)
T ss_dssp EETTC-THHHHHHHHHHH---GGGEESSEEEEEEECC--C--CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTT--TC
T ss_pred EECCC-HHHHHHHHHHHh---hhhEEcCCEEEEEEecCCe--EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhc--cC
Confidence 55555 888888888877 5799999999999985555 34776 57778999999999999988888875 45
Q ss_pred hHHHHHhccCCCCCEEEEEEEEecCCCCC
Q 016871 342 MAYFKRLEKLVGVPVINIHIWFDRKLKNT 370 (381)
Q Consensus 342 ~~~~~~~~~l~~~~~~~v~l~~~~~~~~~ 370 (381)
....++++++.+.+..++++.|++++|..
T Consensus 304 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~ 332 (478)
T 2ivd_A 304 DALAALVAGIAYAPIAVVHLGFDAGTLPA 332 (478)
T ss_dssp HHHHHHHHTCCBCCEEEEEEEECTTSSCC
T ss_pred HHHHHHHhcCCCCcEEEEEEEEccccCCC
Confidence 56678889999999999999999998754
No 6
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.95 E-value=8.8e-27 Score=225.70 Aligned_cols=296 Identities=16% Similarity=0.086 Sum_probs=199.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCcccce
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~~~~ 136 (381)
.+||+|||||++||+||+.|++.|++|+|+|+++++||++.+.. .+|+.+|.|++++.+.++++.++++++|+...+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~ 117 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSP 117 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccHHHHHHHHHcCCcceeec
Confidence 37999999999999999999999999999999999999999877 57899999999998888889999999998544332
Q ss_pred ee----cceeeecCCCCCccccccCCCCCCCchhhHH----HHHhcCCCCChHHHHHHhhhhhh--hhhcCcchhhcccc
Q 016871 137 KE----HSMIFAMPNKPGEFSRFDFPEVLPAPLNGIL----AILRNNEMLTWPEKVKFAIGLLP--AIIGGQAYVEAQDG 206 (381)
Q Consensus 137 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 206 (381)
.. ....+......+....+ +. ......+. .+++.... ....+.. ............+.
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~--~~--~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 185 (495)
T 2vvm_A 118 SFNFSRGVNHFQLRTNPTTSTYM--TH--EAEDELLRSALHKFTNVDGT--------NGRTVLPFPHDMFYVPEFRKYDE 185 (495)
T ss_dssp SCCCSSSCCEEEEESSTTCCEEE--CH--HHHHHHHHHHHHHHHCSSSS--------TTTTTCSCTTSTTSSTTHHHHHT
T ss_pred ccccCCCceEEEecCCCCceeec--CH--HHHHHHHHHHHHHHHccchh--------hhhhcCCCCCCcccCcchhhhhh
Confidence 21 11111111100111000 00 00000111 11110000 0000000 00000112234567
Q ss_pred ccHHHHHHHcC--CChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhcc----cCCCceEEecCCcCccchHHHHH
Q 016871 207 LTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLCLPIVE 280 (381)
Q Consensus 207 ~s~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~l~~~l~~ 280 (381)
+++.+|+++.+ +.+. ...++.++....+..++++++....+..+...... ........+.+| ...++++|.+
T Consensus 186 ~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~ 263 (495)
T 2vvm_A 186 MSYSERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDG-QSAFARRFWE 263 (495)
T ss_dssp SBHHHHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTC-HHHHHHHHHH
T ss_pred hhHHHHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCC-HHHHHHHHHH
Confidence 89999999875 5544 46677888777777888888887665443221000 001112233443 7899999999
Q ss_pred HHHhcC-CEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEE
Q 016871 281 HIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 359 (381)
Q Consensus 281 ~l~~~G-~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v 359 (381)
.+.+.| ++|+++++|++|..++++ +.|++.+|+++.||+||+|+|+..+..|+-.+..|....++++.+.+.+..+|
T Consensus 264 ~l~~~g~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv 341 (495)
T 2vvm_A 264 EAAGTGRLGYVFGCPVRSVVNERDA--ARVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKV 341 (495)
T ss_dssp HHHTTTCEEEESSCCEEEEEECSSS--EEEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEE
T ss_pred HhhhcCceEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEE
Confidence 999998 999999999999985544 34888888789999999999999888875333456667788999999999999
Q ss_pred EEEEecCCCC
Q 016871 360 HIWFDRKLKN 369 (381)
Q Consensus 360 ~l~~~~~~~~ 369 (381)
++.|++|+|.
T Consensus 342 ~l~~~~~~~~ 351 (495)
T 2vvm_A 342 HAEVDNKDMR 351 (495)
T ss_dssp EEEESCGGGG
T ss_pred EEEECCccCC
Confidence 9999999874
No 7
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.95 E-value=7.8e-27 Score=226.44 Aligned_cols=303 Identities=19% Similarity=0.226 Sum_probs=155.7
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCc--ccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND--RLQ 135 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~--~~~ 135 (381)
++|||||||++||+||+.|+++|++|+|+|+++++||++.++. .+|+.+|.|+|++... ..+.++++.+|.+. .+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~-~~~~~l~~~~g~~~~~~~~ 79 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDP-SAIEELFALAGKQLKEYVE 79 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCT-HHHHHHHHTTTCCGGGTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCc-hhHHHHHHHhcchhhhcee
Confidence 5899999999999999999999999999999999999999987 5799999999988632 23667788887543 233
Q ss_pred eeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCC---hHHHHHHhhhhhhh---------------hhcC
Q 016871 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLT---WPEKVKFAIGLLPA---------------IIGG 197 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---------------~~~~ 197 (381)
+.+....+.....++... .+.. ....+...+....... +............. ....
T Consensus 80 ~~~~~~~~~~~~~~g~~~--~~~~----~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (501)
T 4dgk_A 80 LLPVTPFYRLCWESGKVF--NYDN----DQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRA 153 (501)
T ss_dssp EEEESSSEEEEETTSCEE--EECS----CHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHHS
T ss_pred eEecCcceEEEcCCCCEE--Eeec----cHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhhh
Confidence 333332222222222211 1111 1111111111100000 00000000000000 0000
Q ss_pred cchhhc-cccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhcccCCCceEEecCCcCccchH
Q 016871 198 QAYVEA-QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCL 276 (381)
Q Consensus 198 ~~~~~~-~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~ 276 (381)
...+.. ....++.+++.+. +.++..+..+...... .+..+...+..+.+ ..+.....| ..++.|| +..+++
T Consensus 154 ~~~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~-~g~~p~~~~~~~~~---~~~~~~~~G--~~~p~GG-~~~l~~ 225 (501)
T 4dgk_A 154 APQLAKLQAWRSVYSKVASY-IEDEHLRQAFSFHSLL-VGGNPFATSSIYTL---IHALEREWG--VWFPRGG-TGALVQ 225 (501)
T ss_dssp GGGTTTSHHHHHHHHHHHTT-CCCHHHHHHHHHHHHH-HHSCC--CCCTHHH---HHHHHSCCC--EEEETTH-HHHHHH
T ss_pred hhhhhhhhhcccHHHHHHHH-hccHHHHhhhhhhhcc-cCCCcchhhhhhhh---hhhhhccCC--eEEeCCC-CcchHH
Confidence 000000 0112445555554 3344444443322111 11223322222211 111222222 3455555 899999
Q ss_pred HHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH-HHhccCCCcccchHHHHHhccCCCC-
Q 016871 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD-ILKLQLPENWKEMAYFKRLEKLVGV- 354 (381)
Q Consensus 277 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~-~~~~Ll~~~~~~~~~~~~~~~l~~~- 354 (381)
+|++.++++|++|++|++|++|.. +++++++|++.+|+++.||.||++++++ +...|+++.+.+....+.++...+.
T Consensus 226 aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 304 (501)
T 4dgk_A 226 GMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSN 304 (501)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC---------------------------CC
T ss_pred HHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCC
Confidence 999999999999999999999998 4667788999999999999999999766 5567888766666666677777665
Q ss_pred CEEEEEEEEecCCCCCCCceeec
Q 016871 355 PVINIHIWFDRKLKNTYDHLLFS 377 (381)
Q Consensus 355 ~~~~v~l~~~~~~~~~~~~~~~~ 377 (381)
+.+++++.++.+.....+|.++.
T Consensus 305 s~~~~~~~l~~~~~~l~~~~i~~ 327 (501)
T 4dgk_A 305 SLFVLYFGLNHHHDQLAHHTVCF 327 (501)
T ss_dssp EEEEEEEEESSCCTTSCSEEEEE
T ss_pred ceeEEEecccCCccccccceecc
Confidence 48899999999986666666554
No 8
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.95 E-value=5.8e-27 Score=225.43 Aligned_cols=291 Identities=20% Similarity=0.291 Sum_probs=194.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCC------CceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAG------HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGI 130 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g------~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl 130 (381)
.+||+|||||++||+||++|+++| ++|+|+|+++++||++.+.. .+|+.+|.|++++...++.+.++++++|+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 83 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVK-KDGYIIERGPDSFLERKKSAPQLVKDLGL 83 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEEC-CTTCCEESSCCCEETTCTHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEec-cCCEEeccChhhhhhCCHHHHHHHHHcCC
Confidence 579999999999999999999999 99999999999999998876 47899999999998888899999999999
Q ss_pred CcccceeecceeeecCCCCCccccccCCC--CCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhcccccc
Q 016871 131 NDRLQWKEHSMIFAMPNKPGEFSRFDFPE--VLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT 208 (381)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 208 (381)
+...........+.. ..+....+.... ..|. .+..++.. ......++.+....... +.....+..+
T Consensus 84 ~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~p~---~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~s 151 (470)
T 3i6d_A 84 EHLLVNNATGQSYVL--VNRTLHPMPKGAVMGIPT---KIAPFVST-GLFSLSGKARAAMDFIL------PASKTKDDQS 151 (470)
T ss_dssp CTTEEECCCCCEEEE--CSSCEEECCC-------------------------CCSHHHHHHHHS------CCCSSSSCCB
T ss_pred cceeecCCCCccEEE--ECCEEEECCCCcccCCcC---chHHhhcc-CcCCHHHHHHHhcCccc------CCCCCCCCcC
Confidence 876542211111111 111111111000 0000 01111110 11111111111111110 0112345689
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHH-------hhcc---------------cCCCceEEe
Q 016871 209 VQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR-------FLQE---------------KHGSKMAFL 266 (381)
Q Consensus 209 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---------------~~g~~~~~~ 266 (381)
+.+|+++. +..++.+.++.++....+..++++++.......+.. .... ..+..+..+
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (470)
T 3i6d_A 152 LGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTL 230 (470)
T ss_dssp HHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEE
T ss_pred HHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEe
Confidence 99999885 677788888899998988888888887654332210 0000 001233344
Q ss_pred cCCcCccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHH
Q 016871 267 DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFK 346 (381)
Q Consensus 267 ~~~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~ 346 (381)
.+| +..++++|++.+.+ ++|+++++|++|+.++++ +.|+|.+|+++.||+||+|+|++.+..|++.. + ..+
T Consensus 231 ~~g-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~--~--~~~ 301 (470)
T 3i6d_A 231 STG-LQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPHKAAAGMLSEL--P--AIS 301 (470)
T ss_dssp TTC-THHHHHHHHHTCCS--EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCHHHHHHHTTTS--T--THH
T ss_pred CCh-HHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCHHHHHHHcCCc--h--hhH
Confidence 444 77888877776644 799999999999986555 35889999889999999999999999998764 2 357
Q ss_pred HhccCCCCCEEEEEEEEecCCCCC
Q 016871 347 RLEKLVGVPVINIHIWFDRKLKNT 370 (381)
Q Consensus 347 ~~~~l~~~~~~~v~l~~~~~~~~~ 370 (381)
+++.+++.+..++++.|++|+|..
T Consensus 302 ~~~~~~~~~~~~v~l~~~~~~~~~ 325 (470)
T 3i6d_A 302 HLKNMHSTSVANVALGFPEGSVQM 325 (470)
T ss_dssp HHHTCEEEEEEEEEEEESSTTCCC
T ss_pred HHhcCCCCceEEEEEEECchhcCC
Confidence 889999999999999999999854
No 9
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.95 E-value=1.2e-27 Score=232.87 Aligned_cols=285 Identities=16% Similarity=0.242 Sum_probs=192.5
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHC-CCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCcc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~-g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~ 133 (381)
...+||||||||++||+||+.|+++ |++|+|+|+++++||++.+....+|+.+|.|+|++...++.+.+++++++....
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~~ 87 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKED 87 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCccc
Confidence 4578999999999999999999984 999999999999999998866578999999999999888899999999876543
Q ss_pred c-cee-ecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHH
Q 016871 134 L-QWK-EHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQE 211 (381)
Q Consensus 134 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 211 (381)
. ... ....++. ++++..+.+...+ ..............+..... ..........++.+
T Consensus 88 ~~~~~~~~~~i~~----~g~~~~~p~~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~ 147 (513)
T 4gde_A 88 DWYTHQRISYVRC----QGQWVPYPFQNNI--------------SMLPKEEQVKCIDGMIDAAL--EARVANTKPKTFDE 147 (513)
T ss_dssp GEEEEECCEEEEE----TTEEEESSGGGGG--------------GGSCHHHHHHHHHHHHHHHH--HHHTCCSCCCSHHH
T ss_pred eeEEecCceEEEE----CCeEeecchhhhh--------------hhcchhhHHHHHHHHHHHHH--hhhcccccccCHHH
Confidence 2 111 1111111 1122111111100 01111111111111111110 01112334578889
Q ss_pred HHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHH---------HHHHHhhc----cc--CCCceEEecCCcCccchH
Q 016871 212 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCIL---------IALNRFLQ----EK--HGSKMAFLDGNPPERLCL 276 (381)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~----~~--~g~~~~~~~~~~~~~l~~ 276 (381)
|+.+. +...+.+.++.++...++..++++++..+.. ......+. .. ......++..+|+..+++
T Consensus 148 ~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~ 226 (513)
T 4gde_A 148 WIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWI 226 (513)
T ss_dssp HHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHH
T ss_pred HHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHH
Confidence 88765 5567777888888888888877776654321 11111111 11 112233444455889999
Q ss_pred HHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCE
Q 016871 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 356 (381)
Q Consensus 277 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~ 356 (381)
+|++.+.+.|++|+++++|++|..+ ++ . |++.+|+++.||+||+|+|...+..++++. ....+...++|.++
T Consensus 227 ~l~~~l~~~g~~i~~~~~V~~I~~~-~~-~--v~~~~G~~~~ad~vI~t~P~~~l~~~l~~~----~~~~~~~~l~y~~~ 298 (513)
T 4gde_A 227 AVANTLPKEKTRFGEKGKVTKVNAN-NK-T--VTLQDGTTIGYKKLVSTMAVDFLAEAMNDQ----ELVGLTKQLFYSST 298 (513)
T ss_dssp HHHHTSCGGGEEESGGGCEEEEETT-TT-E--EEETTSCEEEEEEEEECSCHHHHHHHTTCH----HHHHHHTTCCEEEE
T ss_pred HHHHHHHhcCeeeecceEEEEEEcc-CC-E--EEEcCCCEEECCEEEECCCHHHHHHhcCch----hhHhhhhcccCCce
Confidence 9999999999999999999999873 33 2 668899999999999999999999998753 34467788999999
Q ss_pred EEEEEEEecCCC
Q 016871 357 INIHIWFDRKLK 368 (381)
Q Consensus 357 ~~v~l~~~~~~~ 368 (381)
..|++.++.+.+
T Consensus 299 ~~v~l~~~~~~~ 310 (513)
T 4gde_A 299 HVIGVGVRGSRP 310 (513)
T ss_dssp EEEEEEEESSCC
T ss_pred EEEEEEEecccc
Confidence 999999988753
No 10
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.95 E-value=2.4e-26 Score=220.19 Aligned_cols=297 Identities=16% Similarity=0.168 Sum_probs=195.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCcccce
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~~~~ 136 (381)
.+||+|||||++||+||+.|++.|++|+|+|+++.+||++.+... .|..+|.|++++......+.++++++|++....+
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI-DGAVLEIGGQWVSPDQTALISLLDELGLKTFERY 83 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE-TTEEEECSCCCBCTTCHHHHHHHHHTTCCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc-CCceeccCCeEecCccHHHHHHHHHcCCcccccc
Confidence 579999999999999999999999999999999999999988764 6888999999988767778999999998754433
Q ss_pred eecceeeecCCCCCccccccCCCCCCC-chhhHHHHHhcCCCCChHHHHHHhhhhhh-hhhcCcchhhccccccHHHHHH
Q 016871 137 KEHSMIFAMPNKPGEFSRFDFPEVLPA-PLNGILAILRNNEMLTWPEKVKFAIGLLP-AIIGGQAYVEAQDGLTVQEWMR 214 (381)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~l~ 214 (381)
.....++... ++.. +.+....+. .......+... ...+........ ............+..++.+|++
T Consensus 84 ~~~~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 153 (453)
T 2yg5_A 84 REGESVYISS--AGER--TRYTGDSFPTNETTKKEMDRL------IDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLI 153 (453)
T ss_dssp CCSEEEEECT--TSCE--EEECSSSCSCCHHHHHHHHHH------HHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHH
T ss_pred cCCCEEEEeC--CCce--eeccCCCCCCChhhHHHHHHH------HHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHH
Confidence 3332222221 0111 111111110 00111111100 000000000000 0000011122345789999999
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCC-cchHHHHHHHHHHhhc-----ccCCCceEEecCCcCccchHHHHHHHHhcCCE
Q 016871 215 KQGVPDRVTTEVFIAMSKALNFINPD-ELSMQCILIALNRFLQ-----EKHGSKMAFLDGNPPERLCLPIVEHIQSLGGE 288 (381)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~l~~~l~~~l~~~G~~ 288 (381)
+.+.. +....++..+....+..+++ +++....+..+...-. ...+....++.+| ++.++++|++.+ |++
T Consensus 154 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l---g~~ 228 (453)
T 2yg5_A 154 NQSDD-AEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGG-MQQVSIRMAEAL---GDD 228 (453)
T ss_dssp HHCSC-HHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTC-THHHHHHHHHHH---GGG
T ss_pred hhcCC-HHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCC-hHHHHHHHHHhc---CCc
Confidence 88654 44566777777677777888 8888766544332100 0001223445554 788888888765 689
Q ss_pred EEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEEecCCC
Q 016871 289 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLK 368 (381)
Q Consensus 289 i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~ 368 (381)
|++|++|++|..++++ .+.|++ +|+++.||+||+|+|++.+..|+..+..|....++++++.+.+..++++.|++|+|
T Consensus 229 i~~~~~V~~i~~~~~~-~v~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (453)
T 2yg5_A 229 VFLNAPVRTVKWNESG-ATVLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFW 306 (453)
T ss_dssp EECSCCEEEEEEETTE-EEEEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGG
T ss_pred EEcCCceEEEEEeCCc-eEEEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCC
Confidence 9999999999985443 134666 67789999999999999888887544566677788999999999999999999998
Q ss_pred CCC
Q 016871 369 NTY 371 (381)
Q Consensus 369 ~~~ 371 (381)
...
T Consensus 307 ~~~ 309 (453)
T 2yg5_A 307 RED 309 (453)
T ss_dssp GGG
T ss_pred CCC
Confidence 544
No 11
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.95 E-value=2.2e-26 Score=221.75 Aligned_cols=298 Identities=20% Similarity=0.281 Sum_probs=202.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCC--CceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g--~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~~ 134 (381)
.+||+|||||++||++|++|++.| ++|+|+|+++.+||++.+.. ..|+.+|.|++.+...++.+.++++++|++...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYR-EDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEEC-STTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEe-eCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 579999999999999999999999 99999999999999988876 478999999999988888999999999998765
Q ss_pred ceeecceeeecCCCCCccccccCCC--CCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHHH
Q 016871 135 QWKEHSMIFAMPNKPGEFSRFDFPE--VLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (381)
........+... .+....+.... ..|. .+..++. ........+. ........ .........+..++.+|
T Consensus 83 ~~~~~~~~~~~~--~g~~~~~p~~~~~~~p~---~~~~~~~-~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 83 VRNNTSQAFILD--TGGLHPIPKGAVMGIPT---DLDLFRQ-TTLLTEEEKQ-EVADLLLH--PSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp EECCCCCEEEEE--TTEEEECCSSEETTEES---CHHHHTT-CSSSCHHHHH-HHHHHHHS--CCTTCCCCSSCCBHHHH
T ss_pred eecCCCceEEEE--CCEEEECCCcccccCcC---chHHHhh-ccCCChhHHH-HhhCcccC--CcccccCCCCCcCHHHH
Confidence 432111111111 11111111100 0111 1222222 2344443333 22111110 01111113456899999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHh-------h----ccc--------------CCCceEEec
Q 016871 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------L----QEK--------------HGSKMAFLD 267 (381)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~--------------~g~~~~~~~ 267 (381)
+.+. +..++.+.++.++....+..++++++....+..+..+ . ... .+..+.++.
T Consensus 154 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (475)
T 3lov_A 154 LRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLE 232 (475)
T ss_dssp HHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEET
T ss_pred HHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeC
Confidence 9885 6678888889999989888888887754322222110 0 000 123444555
Q ss_pred CCcCccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHH
Q 016871 268 GNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 347 (381)
Q Consensus 268 ~~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~ 347 (381)
+| +..++++|++.+.+ ++|+++++|++|+.++++ +.|+|.+| ++.||+||+|+|++.+.+|+++.+. +.
T Consensus 233 ~G-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~~-----~~ 301 (475)
T 3lov_A 233 TG-LESLIERLEEVLER--SEIRLETPLLAISREDGR--YRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAHL-----PE 301 (475)
T ss_dssp TC-HHHHHHHHHHHCSS--CEEESSCCCCEEEEETTE--EEEECTTC-CEEESEEEECSCHHHHHHHCTTSCC-----HH
T ss_pred Ch-HHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCE--EEEEECCC-eEECCEEEECCCHHHHHHHcCccCH-----HH
Confidence 54 77888888877654 799999999999985554 34888899 8999999999999999999887532 67
Q ss_pred hccCCCCCEEEEEEEEecCCCCCCCceee
Q 016871 348 LEKLVGVPVINIHIWFDRKLKNTYDHLLF 376 (381)
Q Consensus 348 ~~~l~~~~~~~v~l~~~~~~~~~~~~~~~ 376 (381)
+.++.+.+..++++.|++|++...+..+|
T Consensus 302 ~~~~~~~~~~~v~l~~~~~~~~~~~g~g~ 330 (475)
T 3lov_A 302 LEQLTTHSTATVTMIFDQQQSLPIEGTGF 330 (475)
T ss_dssp HHTCCEEEEEEEEEEEECCSSCSSSSSEE
T ss_pred HhcCCCCeEEEEEEEECCcCCCCCCCEEE
Confidence 88999999999999999998544444444
No 12
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.93 E-value=7.6e-25 Score=212.59 Aligned_cols=292 Identities=19% Similarity=0.217 Sum_probs=189.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCcccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~~~ 135 (381)
..+||+|||||++||+||+.|++.|++|+|+|+++.+||++.+.. .+|+.+|.|++++...++.+.++++++|+.....
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~~ 90 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQ 90 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cCCeEEecCCcccccCcHHHHHHHHHcCCcccce
Confidence 468999999999999999999999999999999999999998876 4789999999999877788999999999876543
Q ss_pred eeec-ceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHHHHH
Q 016871 136 WKEH-SMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (381)
Q Consensus 136 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (381)
+... ...+.. .++.... ++.. ...++.. ....+.++.+............ ......+..++.+|++
T Consensus 91 ~~~~~~~~~~~--~~g~~~~------~p~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~l~ 157 (504)
T 1sez_A 91 FPLSQNKRYIA--RNGTPVL------LPSN---PIDLIKS-NFLSTGSKLQMLLEPILWKNKK-LSQVSDSHESVSGFFQ 157 (504)
T ss_dssp CCSSCCCEEEE--SSSSEEE------CCSS---HHHHHHS-SSSCHHHHHHHHTHHHHC-----------CCCBHHHHHH
T ss_pred eccCCCceEEE--ECCeEEE------CCCC---HHHHhcc-ccCCHHHHHHHhHhhhccCccc-ccccCCCCccHHHHHH
Confidence 3211 001111 1111110 1111 1222221 2333333333322111000000 0001134589999998
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHh---------------hccc---------------CCCceE
Q 016871 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF---------------LQEK---------------HGSKMA 264 (381)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~---------------~g~~~~ 264 (381)
+. +.+++.+.++.++....+..++++++....+..+... +... ......
T Consensus 158 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (504)
T 1sez_A 158 RH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSF 236 (504)
T ss_dssp HH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCB
T ss_pred HH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceE
Confidence 86 6778888888888888888888888875543222111 1000 011233
Q ss_pred EecCCcCccchHHHHHHHHhcC-CEEEecceeeEEEEcCCCC----EEEEEEe--CC---eEEEecEEEEccCHHHHhcc
Q 016871 265 FLDGNPPERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGT----VKNFLLT--NG---NVIDGDAYVFATPVDILKLQ 334 (381)
Q Consensus 265 ~~~~~~~~~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~~----~~~V~t~--~G---~~i~ad~VI~A~~~~~~~~L 334 (381)
++.+| ++.|+++|++.+ | ++|++|++|++|..++++. .+.|++. +| +++.||+||+|+|++.+.+|
T Consensus 237 ~~~GG-~~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~l 312 (504)
T 1sez_A 237 SFLGG-MQTLTDAICKDL---REDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSM 312 (504)
T ss_dssp EETTC-THHHHHHHHTTS---CTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTS
T ss_pred eeCcH-HHHHHHHHHhhc---ccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHH
Confidence 44444 778877777654 4 6899999999999865552 1335543 45 57899999999999999998
Q ss_pred CCC---cccchHHHHHhccCCCCCEEEEEEEEecCCCC
Q 016871 335 LPE---NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN 369 (381)
Q Consensus 335 l~~---~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~ 369 (381)
++. .+.+. ..+.++++.++.+|++.|++++|.
T Consensus 313 l~~~~~~~~~~---~~l~~~~~~~~~~v~l~~~~~~~~ 347 (504)
T 1sez_A 313 KIAKRGNPFLL---NFIPEVDYVPLSVVITTFKRENVK 347 (504)
T ss_dssp EEESSSSBCCC---TTSCCCCEEEEEEEEEEEEGGGBS
T ss_pred hhcccCCcccH---HHHhcCCCCceEEEEEEEchhhcC
Confidence 831 11222 126778888899999999999875
No 13
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.92 E-value=5.2e-24 Score=204.92 Aligned_cols=294 Identities=17% Similarity=0.190 Sum_probs=193.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCC-CceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g-~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~~ 134 (381)
..+||+|||||++||++|+.|++.| .+|+|+|+++.+||.+.+....+|+.+|.|++.+...++.+.++++++. +.-.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~~~~ 86 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-QGWN 86 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-SCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-hhhh
Confidence 4689999999999999999999998 7999999999999999986447899999999999877778889998875 2111
Q ss_pred ceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHHHHH
Q 016871 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (381)
.......++. .+....+.+... + ..+...........+..... .....+..++.+|+.
T Consensus 87 ~~~~~~~~~~----~g~~~~~P~~~~----~----------~~l~~~~~~~~~~~ll~~~~----~~~~~~~~s~~e~~~ 144 (484)
T 4dsg_A 87 VLQRESWVWV----RGRWVPYPFQNN----I----------HRLPEQDRKRCLDELVRSHA----RTYTEPPNNFEESFT 144 (484)
T ss_dssp EEECCCEEEE----TTEEEESSGGGC----G----------GGSCHHHHHHHHHHHHHHHH----CCCSSCCSSHHHHHH
T ss_pred hccCceEEEE----CCEEEEeCccch----h----------hhCCHHHHHHHHHHHHHHHh----ccCCCCCCCHHHHHH
Confidence 1111111111 112211111000 0 01111122222222221100 112235679999998
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCCcchHHHH---------HHHHHHhhcccC------CCceEEecCCcCccchHHHH
Q 016871 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCI---------LIALNRFLQEKH------GSKMAFLDGNPPERLCLPIV 279 (381)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~------g~~~~~~~~~~~~~l~~~l~ 279 (381)
+. +..++.+.++.+++..+++.++++++..+. ...+...+.... ...+.|+..+++..++++|+
T Consensus 145 ~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la 223 (484)
T 4dsg_A 145 RQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIK 223 (484)
T ss_dssp HH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHH
T ss_pred HH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHH
Confidence 76 556666777888888888888888776321 111222222111 12344555445899999999
Q ss_pred HHHHhcCCEEEec--ceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCC--cccchHHHHHhccCCCCC
Q 016871 280 EHIQSLGGEVRLN--SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE--NWKEMAYFKRLEKLVGVP 355 (381)
Q Consensus 280 ~~l~~~G~~i~~~--t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~--~~~~~~~~~~~~~l~~~~ 355 (381)
+.+.+. +|+++ ++|++|..+ ++. |++.+|+++.||+||+|+|++.+..|+++ ...+....+.+..++|.+
T Consensus 224 ~~l~~~--~i~~~~~~~V~~I~~~-~~~---v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s 297 (484)
T 4dsg_A 224 EKLPSE--KLTFNSGFQAIAIDAD-AKT---ITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSS 297 (484)
T ss_dssp HHSCGG--GEEECGGGCEEEEETT-TTE---EEETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEE
T ss_pred hhhhhC--eEEECCCceeEEEEec-CCE---EEECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCc
Confidence 888653 78999 579999874 332 55678888999999999999999988854 224556678899999999
Q ss_pred EEEEEEEEecCCCC--CCCceeeccC
Q 016871 356 VINIHIWFDRKLKN--TYDHLLFSRS 379 (381)
Q Consensus 356 ~~~v~l~~~~~~~~--~~~~~~~~~~ 379 (381)
+.+|++.|+++... ...+.+|.++
T Consensus 298 ~~~v~l~~~~~~~~~~~~~~~i~vp~ 323 (484)
T 4dsg_A 298 TNVIGIGVKGTPPPHLKTACWLYFPE 323 (484)
T ss_dssp EEEEEEEEESCCCGGGTTCCEEECCS
T ss_pred eEEEEEEEcCCCcccCCCCeEEEEEc
Confidence 99999999998542 2344445443
No 14
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.91 E-value=2.5e-22 Score=190.95 Aligned_cols=288 Identities=19% Similarity=0.220 Sum_probs=178.5
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCC--CCCeeecceeeeccC-CccHHHHHHHhCCCccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG--DGDWYETGLHIFFGA-YPNIQNLFGELGINDRL 134 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~--~g~~~d~G~~~~~~~-~~~~~~l~~~~gl~~~~ 134 (381)
+||+|||||++|++||+.|++.|++|+|+|+++++||++.+.... .|..++.|++++... ++.+.++++++|++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTAA 81 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeeee
Confidence 699999999999999999999999999999999999999875422 388999999998877 77788899999987543
Q ss_pred ceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHHHHH
Q 016871 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (381)
........+.. ..+.+ ....+........+... ...................+.....+ .++.+++.
T Consensus 82 ~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~d-~s~~~~l~ 148 (431)
T 3k7m_X 82 ASEFTSFRHRL--GPTAV-----DQAFPIPGSEAVAVEAA-----TYTLLRDAHRIDLEKGLENQDLEDLD-IPLNEYVD 148 (431)
T ss_dssp CCCCCEECCBS--CTTCC-----SSSSCCCGGGHHHHHHH-----HHHHHHHHTTCCTTTCTTSSSCGGGC-SBHHHHHH
T ss_pred cCCCCcEEEEe--cCCee-----cCCCCCCHHHHHHHHHH-----HHHHHHHHHhcCCCCCccCcchhhhc-CCHHHHHH
Confidence 22111111100 00111 01000001111111000 00000000001000001112223345 88999998
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhc---c-cCCCceEEecCCcCccchHHHHHHHH-hcCCEE
Q 016871 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ---E-KHGSKMAFLDGNPPERLCLPIVEHIQ-SLGGEV 289 (381)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~g~~~~~~~~~~~~~l~~~l~~~l~-~~G~~i 289 (381)
..+.... ....+..........+.++++.......+...-. . ...... ...++ ...+.+.+. +.| +|
T Consensus 149 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g-----~~~l~~~~~~~~g-~i 220 (431)
T 3k7m_X 149 KLDLPPV-SRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNG-----SADLVDAMSQEIP-EI 220 (431)
T ss_dssp HHTCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTC-----THHHHHHHHTTCS-CE
T ss_pred hcCCCHH-HHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCc-----HHHHHHHHHhhCC-ce
Confidence 8766554 3445555556666677777777665544332100 0 001111 22222 334444443 446 99
Q ss_pred EecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEEecCCC
Q 016871 290 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLK 368 (381)
Q Consensus 290 ~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~ 368 (381)
++|++|++|+.++++ + .|+|.+|+++.||+||+|+|...+..+.-.+..+....+++..+.+.+.++|++.|+++++
T Consensus 221 ~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 221 RLQTVVTGIDQSGDV-V-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp ESSCCEEEEECSSSS-E-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred EeCCEEEEEEEcCCe-E-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 999999999975554 3 4888889779999999999999888774233356666778888888889999999999985
No 15
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.90 E-value=2.8e-23 Score=201.97 Aligned_cols=276 Identities=17% Similarity=0.191 Sum_probs=162.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCC-CceEEEeccccCCceeeeeeCCCCCeeecceeeeccCC-ccHHHHHHHhCCCcc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAY-PNIQNLFGELGINDR 133 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g-~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~-~~~~~l~~~~gl~~~ 133 (381)
..+||+|||||++||+||+.|++.| ++|+|+|+++++||++.+....+|+.+|.|++++.+.. ..+.+++.++|+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~ 86 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDG 86 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCc
Confidence 4579999999999999999999999 99999999999999998876447899999999988653 336666777776321
Q ss_pred ---cceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHH
Q 016871 134 ---LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (381)
Q Consensus 134 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (381)
..+....... ........ ..... ..+..+++ ........... .....+..++.
T Consensus 87 ~~~~~~~~~~~~~-~~~~~~~~-----~~~~~---~~~~~~~~------------~~~~~~~~~~~---~~~~~~d~s~~ 142 (516)
T 1rsg_A 87 RTRFVFDDDNFIY-IDEERGRV-----DHDKE---LLLEIVDN------------EMSKFAELEFH---QHLGVSDCSFF 142 (516)
T ss_dssp CCCEECCCCCCEE-EETTTEEC-----TTCTT---TCHHHHHH------------HHHHHHHHHC----------CCBHH
T ss_pred ceeEEECCCCEEE-EcCCCccc-----cccHH---HHHHHHHH------------HHHHHHHHHhh---hccCCCCCCHH
Confidence 1111111111 00000000 00000 00111110 00000000000 00112345666
Q ss_pred HHHHHc------CCChHHHHHHHHHHHh---hcCCCCCCcchHHHHHHHHHHhhcccCCCceEEecCCcCccchHHHHHH
Q 016871 211 EWMRKQ------GVPDRVTTEVFIAMSK---ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (381)
Q Consensus 211 ~~l~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~ 281 (381)
+++.+. .+... ...++..+.. ...+.+++.++..... ....+. ..++.+ .+.++++|++.
T Consensus 143 ~~l~~~l~~~~~~l~~~-~~~~~~~~~~~~~~~~g~~~~~~s~~~~~-------~~~~~~-~~~~~g--~~~l~~~l~~~ 211 (516)
T 1rsg_A 143 QLVMKYLLQRRQFLTND-QIRYLPQLCRYLELWHGLDWKLLSAKDTY-------FGHQGR-NAFALN--YDSVVQRIAQS 211 (516)
T ss_dssp HHHHHHHHHHGGGSCHH-HHHHHHHHHGGGHHHHTBCTTTSBHHHHC-------CCCSSC-CEEESC--HHHHHHHHHTT
T ss_pred HHHHHHHHHhhcccCHH-HHHHHHHHHHHHHHHhCCChHHCChHHHH-------hhccCc-chhhhC--HHHHHHHHHHh
Confidence 665442 11111 1112222221 1123345555544321 111222 223333 55555555554
Q ss_pred HHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhc-------------cCCCcccchHHHHHh
Q 016871 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL-------------QLPENWKEMAYFKRL 348 (381)
Q Consensus 282 l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~-------------Ll~~~~~~~~~~~~~ 348 (381)
+. +++|++|++|++|..++++. +.|++.+|+++.||+||+|+|+..+.. +.|. .|....+++
T Consensus 212 l~--~~~i~~~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~--Lp~~~~~ai 286 (516)
T 1rsg_A 212 FP--QNWLKLSCEVKSITREPSKN-VTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPP--LKPVIQDAF 286 (516)
T ss_dssp SC--GGGEETTCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESC--CCHHHHHHT
T ss_pred CC--CCEEEECCEEEEEEEcCCCe-EEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCC--CCHHHHHHH
Confidence 43 25799999999999843333 468899998899999999999997753 2343 566778899
Q ss_pred ccCCCCCEEEEEEEEecCCCCCC
Q 016871 349 EKLVGVPVINIHIWFDRKLKNTY 371 (381)
Q Consensus 349 ~~l~~~~~~~v~l~~~~~~~~~~ 371 (381)
+++.+.+..||++.|++|||...
T Consensus 287 ~~~~~~~~~Kv~l~f~~~fW~~~ 309 (516)
T 1rsg_A 287 DKIHFGALGKVIFEFEECCWSNE 309 (516)
T ss_dssp TSSCCCCCEEEEEEESSCCSCCS
T ss_pred HhCCCCcceEEEEEeCCCCCCCC
Confidence 99999999999999999999654
No 16
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.90 E-value=3.5e-22 Score=189.12 Aligned_cols=263 Identities=15% Similarity=0.086 Sum_probs=178.5
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCC-------------------CCCeeecceeee
Q 016871 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-------------------DGDWYETGLHIF 114 (381)
Q Consensus 54 ~~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~-------------------~g~~~d~G~~~~ 114 (381)
.+..+||+|||+|++|+++|+.|++.|++|+|+|+++..||.+.+.... .++.+|++++++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 4467899999999999999999999999999999999999998876411 246788887776
Q ss_pred ccCCccHHHHHHHhCCCcccceeecceeeecCCC-------CCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHh
Q 016871 115 FGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNK-------PGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFA 187 (381)
Q Consensus 115 ~~~~~~~~~l~~~~gl~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (381)
. ....+.+++.+.|+...++|......|..... .+++. . +|. ...+++. ...+.+.++.++.
T Consensus 97 ~-~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~--~----VPs---s~~e~~~-~~lLs~~eK~~l~ 165 (475)
T 3p1w_A 97 L-VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIH--K----VPA---TDMEALV-SPLLSLMEKNRCK 165 (475)
T ss_dssp E-TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEE--E----CCC---SHHHHHT-CTTSCHHHHHHHH
T ss_pred e-cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceE--e----CCC---CHHHHhh-ccCCCHHHHHHHH
Confidence 5 45578999999999998888887766544211 11111 1 222 2344444 3677787777654
Q ss_pred hhhhhhhhcCc--c-hh--hccccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhh---cccC
Q 016871 188 IGLLPAIIGGQ--A-YV--EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QEKH 259 (381)
Q Consensus 188 ~~~~~~~~~~~--~-~~--~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 259 (381)
.-+........ + .. .+.+..++.+|+++.++.+.+.+.+...+.... ..+....++...+..+..|. ....
T Consensus 166 kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~-~~~~~~~~a~~~l~ri~~y~~Sl~~yg 244 (475)
T 3p1w_A 166 NFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYL-NDDYLKQPAYLTLERIKLYMQSISAFG 244 (475)
T ss_dssp HHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-SSGGGGSBHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhc-CCCcccCCHHHHHHHHHHHHHHHhhcC
Confidence 33322211111 1 11 123568999999999988776553222211111 11222234444444433332 1112
Q ss_pred CCceEEecCCcCccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 260 g~~~~~~~~~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+..+.|+.+| +..++++|.+.+++.|++|+++++|++|..++++++++|++.+|+++.||+||+|++.+
T Consensus 245 ~s~~~yp~gG-~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 245 KSPFIYPLYG-LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp SCSEEEETTC-TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred CCceEEECCC-HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4567788877 89999999999999999999999999999855677889999999889999999999765
No 17
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.89 E-value=9.8e-23 Score=196.98 Aligned_cols=288 Identities=17% Similarity=0.187 Sum_probs=168.3
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCC----------------CCCeeecceeeeccCC
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG----------------DGDWYETGLHIFFGAY 118 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~----------------~g~~~d~G~~~~~~~~ 118 (381)
+..+||+|||||++||+||+.|++.|++|+|+|+++++||++.+.... .+..++.|++.+...+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSH 88 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHH
Confidence 457899999999999999999999999999999999999998776532 5778899998887666
Q ss_pred ccHHHHHHHhCCCcccceeecc-eeee-cCCCCCccccccCCCCCCCchh-hHHHHHhcCCCCChHHHHHHhhhhhhhhh
Q 016871 119 PNIQNLFGELGINDRLQWKEHS-MIFA-MPNKPGEFSRFDFPEVLPAPLN-GILAILRNNEMLTWPEKVKFAIGLLPAII 195 (381)
Q Consensus 119 ~~~~~l~~~~gl~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (381)
.+.++++++|++......... ..+. ... . .+.. ...... ....+... ..+........ .
T Consensus 89 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~------~~~g-~~~~~~~~~~~~~~~-----~~~l~~~~~~~----~ 150 (489)
T 2jae_A 89 -ITLDYCRELGVEIQGFGNQNANTFVNYQSD-T------SLSG-QSVTYRAAKADTFGY-----MSELLKKATDQ----G 150 (489)
T ss_dssp -THHHHHHHHTCCEEEECCCCTTSEEECCCS-S------TTTT-CCEEHHHHHHHHHHH-----HHHHHHHHHHH----T
T ss_pred -HHHHHHHHcCCceEEccccCCCceEEecCC-c------ccCC-ccccHHHHhhhhhcc-----HHHHHHHHHhc----c
Confidence 899999999987432111111 1110 110 0 0001 000000 00010000 00000000000 0
Q ss_pred cCcchhhccccccHHHHHHHcCCChHHHHHHHHHHHhhcCC--------C----CCCcchHHHHHHHHHHhhc----ccC
Q 016871 196 GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF--------I----NPDELSMQCILIALNRFLQ----EKH 259 (381)
Q Consensus 196 ~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~~~~~~~~~----~~~ 259 (381)
.........+..++.+|+.+.+- ...+..+.......+. + .+.++...... .+..++. ...
T Consensus 151 ~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (489)
T 2jae_A 151 ALDQVLSREDKDALSEFLSDFGD--LSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRS-GIGRNFSFDFGYDQ 227 (489)
T ss_dssp TTTTTSCHHHHHHHHHHHHHHTT--CCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHH-TTTTTGGGGGCTTT
T ss_pred ccccccchhhHHHHHHHHHHhhh--hhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhh-hHHHHHhhhhcccc
Confidence 00000111233467777765221 0000000000000000 0 01111111110 0111111 112
Q ss_pred CCceEEecCCcCccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCC---eEEEecEEEEccCHHHHhccCC
Q 016871 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQLP 336 (381)
Q Consensus 260 g~~~~~~~~~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G---~~i~ad~VI~A~~~~~~~~Ll~ 336 (381)
+..+.++.+| .+.|+++|++.+.+ ++|++|++|++|..++++ + .|++.+| +++.||+||+|+|++.+..|+.
T Consensus 228 ~~~~~~~~gG-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~ 302 (489)
T 2jae_A 228 AMMMFTPVGG-MDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEG-V-TVEYTAGGSKKSITADYAICTIPPHLVGRLQN 302 (489)
T ss_dssp SSSEEEETTC-TTHHHHHHHHHHCG--GGEETTCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECSCHHHHTTSEE
T ss_pred CccEEeecCC-HHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCe-E-EEEEecCCeEEEEECCEEEECCCHHHHHhCcc
Confidence 2345555555 88999999988743 689999999999985554 3 3777776 5799999999999998888865
Q ss_pred CcccchHHHHHhccCCCCCEEEEEEEEecCCCCC
Q 016871 337 ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT 370 (381)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~ 370 (381)
..+....++++++++.+..+|++.|++++|..
T Consensus 303 --~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~ 334 (489)
T 2jae_A 303 --NLPGDVLTALKAAKPSSSGKLGIEYSRRWWET 334 (489)
T ss_dssp --CCCHHHHHHHHTEECCCEEEEEEEESSCHHHH
T ss_pred --CCCHHHHHHHHhCCCccceEEEEEeCCCCccC
Confidence 35666778899999999999999999998844
No 18
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.89 E-value=1.3e-21 Score=189.64 Aligned_cols=291 Identities=18% Similarity=0.192 Sum_probs=174.2
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeC-CCCCeeecceeeeccCCccHHHHHHHhCCCcc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKD-GDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~-~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~ 133 (381)
...+||+|||||++||+||+.|++.|++|+|+|+++++||++.+... ..++.+|.|++++......+.++++++|++..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 34679999999999999999999999999999999999999877653 35788999999988777778999999998642
Q ss_pred cceee-cceeeecCCCCCcc-------ccccCCCCCCCch-hhHHHHHhcCCCCChHHHHHHhhhhhhhhh--cCcchhh
Q 016871 134 LQWKE-HSMIFAMPNKPGEF-------SRFDFPEVLPAPL-NGILAILRNNEMLTWPEKVKFAIGLLPAII--GGQAYVE 202 (381)
Q Consensus 134 ~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 202 (381)
..... ....+......... ..+.+.- .+... .....++.. .......... .......
T Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 178 (498)
T 2iid_A 111 EFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPV-KPSEAGKSAGQLYEE-----------SLGKVVEELKRTNCSYILN 178 (498)
T ss_dssp EECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCC-CGGGTTCCHHHHHHH-----------HTHHHHHHHHHSCHHHHHH
T ss_pred eecccCCccEEEeCCeeecccccccCccccccCC-CccccCCCHHHHHHH-----------HHHHHHHHHhhccHHHHHH
Confidence 11100 00011100000000 0000000 00000 000011000 0000000000 0001122
Q ss_pred ccccccHHHHHHHcC-CChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhcccCCCceEEecCCcCccchHHHHHH
Q 016871 203 AQDGLTVQEWMRKQG-VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (381)
Q Consensus 203 ~~~~~s~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~ 281 (381)
..+..++.+|+...+ +...... .+..+........ ............ + ..+..+..+.+| .+.++++|++.
T Consensus 179 ~~~~~s~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~-~--~~~~~~~~~~gG-~~~l~~~l~~~ 250 (498)
T 2iid_A 179 KYDTYSTKEYLIKEGDLSPGAVD-MIGDLLNEDSGYY---VSFIESLKHDDI-F--AYEKRFDEIVDG-MDKLPTAMYRD 250 (498)
T ss_dssp HHTTSBHHHHHHHTSCCCHHHHH-HHHHHTTCGGGTT---SBHHHHHHHHHH-H--TTCCCEEEETTC-TTHHHHHHHHH
T ss_pred HhhhhhHHHHHHHccCCCHHHHH-HHHHhcCcccchh---HHHHHHHHHHhc-c--ccCcceEEeCCc-HHHHHHHHHHh
Confidence 345678899998865 3333222 2222211110000 111111111111 1 122334455555 88999999988
Q ss_pred HHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCe----EEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEE
Q 016871 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 357 (381)
Q Consensus 282 l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~----~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~ 357 (381)
+.+ +|++|++|++|..+++++ .|++.+|+ ++.||+||+|+|...+..+.-.+..|....++++++++.+..
T Consensus 251 l~~---~i~~~~~V~~I~~~~~~v--~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~~ 325 (498)
T 2iid_A 251 IQD---KVHFNAQVIKIQQNDQKV--TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSGT 325 (498)
T ss_dssp TGG---GEESSCEEEEEEECSSCE--EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEE
T ss_pred ccc---ccccCCEEEEEEECCCeE--EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHHHHhCCCccee
Confidence 764 799999999999865553 47777764 589999999999998887653333677778899999999999
Q ss_pred EEEEEEecCCCCC
Q 016871 358 NIHIWFDRKLKNT 370 (381)
Q Consensus 358 ~v~l~~~~~~~~~ 370 (381)
+|++.|++++|..
T Consensus 326 kv~l~~~~~~w~~ 338 (498)
T 2iid_A 326 KIFLTCTTKFWED 338 (498)
T ss_dssp EEEEEESSCGGGG
T ss_pred EEEEEeCCCCccC
Confidence 9999999999854
No 19
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.86 E-value=1.8e-21 Score=187.24 Aligned_cols=287 Identities=18% Similarity=0.196 Sum_probs=167.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccccCCceeeeeeCCCCCeeecceeeecc----CCccHHHHHHH-hC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG----AYPNIQNLFGE-LG 129 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~----~~~~~~~l~~~-~g 129 (381)
..+||+|||||++|+++|+.|++.|+ +|+|+|+++.+||++.+.. ..|..+|.|++++.+ ....+.+++++ +|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~-~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lg 81 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTN-FAGINVELGANWVEGVNGGKMNPIWPIVNSTLK 81 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEE-ETTEEEESSCCEEEEESSSSCCTHHHHHHTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecc-cCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcC
Confidence 45799999999999999999999998 8999999999999998876 468899999999873 33458889999 89
Q ss_pred CCcccc-eeecc-eeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccc
Q 016871 130 INDRLQ-WKEHS-MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGL 207 (381)
Q Consensus 130 l~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (381)
+..... +.... .++. .++.. .+ .......+... .+.......+.... .. ...+..
T Consensus 82 l~~~~~~~~~~~~~~~~---~~g~~--------~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~--~~~~~~ 138 (472)
T 1b37_A 82 LRNFRSDFDYLAQNVYK---EDGGV--------YD--EDYVQKRIELA-----DSVEEMGEKLSATL---HA--SGRDDM 138 (472)
T ss_dssp CCEEECCCTTGGGCEEC---SSSSB--------CC--HHHHHHHHHHH-----HHHHHHHHHHHHTS---CT--TCTTCC
T ss_pred CceeeccCccccceeEc---CCCCC--------CC--HHHHHHHHHHH-----HHHHHHHHHHHHhh---cc--ccchhh
Confidence 874321 00000 0110 01111 00 11111111100 00000000000000 00 111233
Q ss_pred cHHH--HHHHcCC--ChHHHHHHHHHHHhh-cCCCCCCcchHHHHHHHHHHhhcccCCCceEEecCCcCccchHHHHHHH
Q 016871 208 TVQE--WMRKQGV--PDRVTTEVFIAMSKA-LNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHI 282 (381)
Q Consensus 208 s~~~--~l~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~l 282 (381)
++.+ ++.+... .....+..+..+... .+..+++..+...... ...+.. ..+..+.....++...++++|++.+
T Consensus 139 s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~~-~~~~~~~~~~~gG~~~l~~~l~~~l 216 (472)
T 1b37_A 139 SILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVP-LATFSD-FGDDVYFVADQRGYEAVVYYLAGQY 216 (472)
T ss_dssp BHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSS-CHHHHH-HCSEEEEECCTTCTTHHHHHHHHTT
T ss_pred hHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccc-cccccc-cCCceeeeecCCcHHHHHHHHHHhc
Confidence 4332 4433211 111112222222211 1112222222111000 000000 1111222222334889999999888
Q ss_pred Hhc--------CCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCC--CcccchHHHHHhccCC
Q 016871 283 QSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP--ENWKEMAYFKRLEKLV 352 (381)
Q Consensus 283 ~~~--------G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~--~~~~~~~~~~~~~~l~ 352 (381)
.+. |++|+++++|++|..++++ + .|++.+|++++||+||+|+|++.+..++. .+..+....++++++.
T Consensus 217 ~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~ 294 (472)
T 1b37_A 217 LKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFD 294 (472)
T ss_dssp SCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSE
T ss_pred cccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcC
Confidence 765 6899999999999986555 3 38899998899999999999998887653 2345666778899999
Q ss_pred CCCEEEEEEEEecCCCCC
Q 016871 353 GVPVINIHIWFDRKLKNT 370 (381)
Q Consensus 353 ~~~~~~v~l~~~~~~~~~ 370 (381)
+.+..+|++.|++|+|..
T Consensus 295 ~~~~~kv~l~~~~~~w~~ 312 (472)
T 1b37_A 295 MAVYTKIFLKFPRKFWPE 312 (472)
T ss_dssp EECEEEEEEECSSCCSCC
T ss_pred CcceeEEEEECCCcCCCC
Confidence 889999999999999965
No 20
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.86 E-value=6.3e-21 Score=180.94 Aligned_cols=272 Identities=19% Similarity=0.212 Sum_probs=162.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCC-CceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g-~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~~ 134 (381)
..+||+|||||++||+||+.|++.| ++|+|+|+++++||++.+.. .+|+.+|.|++++...++.+.++++++|++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~~ 83 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVDG 83 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ETTEECCSSCCCBCTTCHHHHHHHHHHCCCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CCCcccccCceeecCCcHHHHHHHHHhCCcccc
Confidence 5679999999999999999999999 99999999999999998876 468899999999887778899999999986432
Q ss_pred ceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcC--cchhhccccccHHHH
Q 016871 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGG--QAYVEAQDGLTVQEW 212 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~ 212 (381)
......+. ..++... .....+.....+...+. ................ -.........++.+|
T Consensus 84 --~~~~~~~~--~~~g~~~---~~~~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 148 (424)
T 2b9w_A 84 --PKLRREFL--HEDGEIY---VPEKDPVRGPQVMAAVQ--------KLGQLLATKYQGYDANGHYNKVHEDLMLPFDEF 148 (424)
T ss_dssp --CCCCEEEE--CTTSCEE---CGGGCTTHHHHHHHHHH--------HHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHH
T ss_pred --ccccceeE--cCCCCEe---ccccCcccchhHHHHHH--------HHHHHHhhhhhhcccccchhhhhhhhccCHHHH
Confidence 11111111 1111110 00000000000000000 0000000000000000 000112345899999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHH--hhcccCCCceEEecCCcCccchHHHHHHHHhcCCEEE
Q 016871 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR--FLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVR 290 (381)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~l~~~l~~~l~~~G~~i~ 290 (381)
+++.+.. .+.+.+..++....+ .++.++++.+.+..+.. ......+..+. +.+| .++++++|.+.+ +.+|+
T Consensus 149 l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~g-~~~l~~~l~~~l---~~~v~ 221 (424)
T 2b9w_A 149 LALNGCE-AARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFVTMMSFAKGDLWT-WADG-TQAMFEHLNATL---EHPAE 221 (424)
T ss_dssp HHHTTCG-GGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHHHHHHHHHTCCBC-CTTC-HHHHHHHHHHHS---SSCCB
T ss_pred HHhhCcH-HHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHhhhhcccCCceEE-eCCh-HHHHHHHHHHhh---cceEE
Confidence 9998765 455544444444333 35566776654322111 11111223332 2333 667777776655 46799
Q ss_pred ecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCE
Q 016871 291 LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 356 (381)
Q Consensus 291 ~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~ 356 (381)
++++|++|..++++ + .|++.+| ++.||+||+|+|++.+..+++.. + ..++.+.++.+.++
T Consensus 222 ~~~~V~~i~~~~~~-v-~v~~~~g-~~~ad~Vv~a~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~ 281 (424)
T 2b9w_A 222 RNVDITRITREDGK-V-HIHTTDW-DRESDVLVLTVPLEKFLDYSDAD--D-DEREYFSKIIHQQY 281 (424)
T ss_dssp CSCCEEEEECCTTC-E-EEEESSC-EEEESEEEECSCHHHHTTSBCCC--H-HHHHHHTTCEEEEE
T ss_pred cCCEEEEEEEECCE-E-EEEECCC-eEEcCEEEECCCHHHHhhccCCC--H-HHHHHHhcCCccee
Confidence 99999999985444 3 4888888 69999999999999887787652 2 22344566666553
No 21
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.85 E-value=3.5e-20 Score=177.03 Aligned_cols=258 Identities=15% Similarity=0.108 Sum_probs=150.5
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCe---------------eecceeeecc---
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDW---------------YETGLHIFFG--- 116 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~---------------~d~G~~~~~~--- 116 (381)
+..+||||||||++||+||+.|++.|++|+|+|+++.+||++.+....+++. ++.|.++..+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccc
Confidence 4568999999999999999999999999999999999999998854211011 3444444322
Q ss_pred ----CCccHHHHHHHhCCCcccceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhh
Q 016871 117 ----AYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLP 192 (381)
Q Consensus 117 ----~~~~~~~l~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (381)
....+.++++++|+...+.+......+... ++... .+ +.. ....+.. ......++... ..+..
T Consensus 89 ~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~--~g~~~--~~----p~~--~~~~~~~--~l~~~~~~~~~-~~~~~ 155 (453)
T 2bcg_G 89 KFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK--QGKIY--KV----PAN--EIEAISS--PLMGIFEKRRM-KKFLE 155 (453)
T ss_dssp CBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE--TTEEE--EC----CSS--HHHHHHC--TTSCHHHHHHH-HHHHH
T ss_pred ceeecCcHHHHHHHhcCCccceEEEEccceeEEe--CCeEE--EC----CCC--hHHHHhh--hccchhhHHHH-HHHHH
Confidence 234688999999987666555544333322 12211 11 111 0111111 11111111111 00100
Q ss_pred hhhc---Ccch-h--hccccccHHHHHHHcCCChHHHHHHHHHHHhhcCCC-CCCcchHHHHHHHHHHhhc---ccCCCc
Q 016871 193 AIIG---GQAY-V--EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFI-NPDELSMQCILIALNRFLQ---EKHGSK 262 (381)
Q Consensus 193 ~~~~---~~~~-~--~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~g~~ 262 (381)
.... ..+. + ......++.+|+++.+..+.+.+ ++..... .... .....+....+..+..+.. ......
T Consensus 156 ~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~ 233 (453)
T 2bcg_G 156 WISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMA-LWTNDDYLQQPARPSFERILLYCQSVARYGKSP 233 (453)
T ss_dssp HHHHCBTTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTS-CCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSCS
T ss_pred HHHHhccCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHHHHH-hccCccccCCchHHHHHHHHHHHHHHHhhcCCc
Confidence 0000 0000 0 12457899999999877665443 3322111 0000 0001122222211111111 112345
Q ss_pred eEEecCCcCccchHHHHHHHHhcCCEEEecceeeEEEEcC-CCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 263 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~-~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.++.+| +.+++++|++.+++.|++|+++++|++|..+. ++.+++|++ +|+++.||+||+|++++
T Consensus 234 ~~~p~gG-~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 234 YLYPMYG-LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp EEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred eEeeCCC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 6567665 88999999999999999999999999999852 566667877 57789999999999988
No 22
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.85 E-value=2.7e-20 Score=186.98 Aligned_cols=286 Identities=17% Similarity=0.174 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCcc-HHHHHHHhCCCcc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPN-IQNLFGELGINDR 133 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~-~~~l~~~~gl~~~ 133 (381)
...+||+|||||++|+++|+.|++.|++|+|+|+++.+||++.+....+|..+|.|++++.+...+ +..+.+++|++..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMH 413 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCccc
Confidence 346899999999999999999999999999999999999999887766789999999999765554 7788899998743
Q ss_pred cceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhh-hcCcchhhccccccHHHH
Q 016871 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAI-IGGQAYVEAQDGLTVQEW 212 (381)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~ 212 (381)
..... ...+. ..+... . ......... .+.........+.... ......+.......+.++
T Consensus 414 ~~~~~-~~l~~---~~g~~~--------~---~~~~~~~~~----~~~~ll~~~~~~~~~~~~~~d~sl~~~~~~~~~~~ 474 (776)
T 4gut_A 414 KFGER-CDLIQ---EGGRIT--------D---PTIDKRMDF----HFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAF 474 (776)
T ss_dssp ECCSC-CCEEC---TTSCBC--------C---HHHHHHHHH----HHHHHHHHHHHHGGGCCGGGCCBHHHHHHHHHHHH
T ss_pred ccccc-cceEc---cCCccc--------c---hhHHHHHHH----HHHHHHHHHHHHhhcccccccccHHHHHHHHHHHH
Confidence 21111 01110 011110 0 000000000 0000000000000000 000000000001112334
Q ss_pred HHHcCCChHHHHHH-H---HHHHhhcCCCCCCcchHHHHHHHHHHhhcccCCCceEEecCCcCccchHHHHHHHHhcCCE
Q 016871 213 MRKQGVPDRVTTEV-F---IAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGE 288 (381)
Q Consensus 213 l~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~l~~~G~~ 288 (381)
++..++.....+.. + ........+.....++...... ...+ ...+....++.+| ...++++|. .|++
T Consensus 475 l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~--~~~~-~~~~G~~~~~~~G-~~~l~~aLa-----~gl~ 545 (776)
T 4gut_A 475 IKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDH--NEFF-AQFAGDHTLLTPG-YSVIIEKLA-----EGLD 545 (776)
T ss_dssp HHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTG--GGGS-CCCCSCEEECTTC-THHHHHHHH-----TTSC
T ss_pred HHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhh--hhhH-HhcCCCeEEECCh-HHHHHHHHH-----hCCc
Confidence 44443321111110 0 0000000111122222110000 0000 1122233333333 344444333 3789
Q ss_pred EEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccC--CCcccchHHHHHhccCCCCCEEEEEEEEecC
Q 016871 289 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL--PENWKEMAYFKRLEKLVGVPVINIHIWFDRK 366 (381)
Q Consensus 289 i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll--~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~ 366 (381)
|+++++|++|+.++++ +.|++.+|+++.||+||+|+|+..+.... -.+..|....++++++.+.+..+|++.|++|
T Consensus 546 I~l~t~V~~I~~~~~~--v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~ 623 (776)
T 4gut_A 546 IQLKSPVQCIDYSGDE--VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYR 623 (776)
T ss_dssp EESSCCEEEEECSSSS--EEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSC
T ss_pred EEcCCeeEEEEEcCCE--EEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcc
Confidence 9999999999986555 34888899889999999999999886521 1123566677889999999999999999999
Q ss_pred CCCC
Q 016871 367 LKNT 370 (381)
Q Consensus 367 ~~~~ 370 (381)
||+.
T Consensus 624 FW~~ 627 (776)
T 4gut_A 624 FWDS 627 (776)
T ss_dssp TTHH
T ss_pred cccc
Confidence 9964
No 23
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.84 E-value=1.1e-19 Score=172.57 Aligned_cols=258 Identities=13% Similarity=0.110 Sum_probs=156.3
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeee-C------C-------------CCCeeecceeee
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWK-D------G-------------DGDWYETGLHIF 114 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~-~------~-------------~g~~~d~G~~~~ 114 (381)
+..+||+|||||++|+++|+.|++.|++|+|+|+++.+||++.+.. . . .++.+|.|++++
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l 83 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFL 83 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCccee
Confidence 3468999999999999999999999999999999999999998876 1 0 346678888776
Q ss_pred ccCCccHHHHHHHhCCCcccceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHH--hhhhhh
Q 016871 115 FGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKF--AIGLLP 192 (381)
Q Consensus 115 ~~~~~~~~~l~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 192 (381)
... ..+.++++++|+...+.+......+... ++... .+ +... ...+.. ......++... ......
T Consensus 84 ~~~-~~l~~ll~~lgl~~~l~~~~~~~~~~~~--~g~~~--~~----p~~~--~~~~~~--~l~~~~~~~~~~~~~~~~~ 150 (433)
T 1d5t_A 84 MAN-GQLVKMLLYTEVTRYLDFKVVEGSFVYK--GGKIY--KV----PSTE--TEALAS--NLMGMFEKRRFRKFLVFVA 150 (433)
T ss_dssp ETT-SHHHHHHHHHTGGGGCCEEECCEEEEEE--TTEEE--EC----CCSH--HHHHHC--SSSCHHHHHHHHHHHHHHH
T ss_pred ecc-chHHHHHHHcCCccceEEEEeCceEEee--CCEEE--EC----CCCH--HHHhhC--cccChhhHHHHHHHHHHHH
Confidence 643 3578899999987666555544333221 12211 11 1110 011111 11111111110 000000
Q ss_pred hhhcCcc---hhhccccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhc--ccCC-CceEEe
Q 016871 193 AIIGGQA---YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKHG-SKMAFL 266 (381)
Q Consensus 193 ~~~~~~~---~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g-~~~~~~ 266 (381)
.+....+ ........++.+|+++.+..+.+.+ ++..........++...+....+..+..+.. ..+| ..+.++
T Consensus 151 ~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p 229 (433)
T 1d5t_A 151 NFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYP 229 (433)
T ss_dssp HCCTTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEE
T ss_pred hhcccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEe
Confidence 0000000 0113457899999998877655433 3332211111122233333322222222222 1122 345567
Q ss_pred cCCcCccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 267 DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 267 ~~~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
.+| +..++++|.+.+++.|++|+++++|++|..+ ++.+++|.+ +|+++.||+||+|++++
T Consensus 230 ~gG-~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad~VV~a~~~~ 289 (433)
T 1d5t_A 230 LYG-LGELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCKQLICDPSYV 289 (433)
T ss_dssp TTC-TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECSEEEECGGGC
T ss_pred CcC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECCEEEECCCCC
Confidence 666 8999999999999999999999999999984 555555664 77789999999999988
No 24
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.83 E-value=2.7e-19 Score=164.74 Aligned_cols=102 Identities=17% Similarity=0.118 Sum_probs=81.5
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCc--ccchHHHHHh
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPEN--WKEMAYFKRL 348 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~--~~~~~~~~~~ 348 (381)
...+++.|++.+ |++|+++++|++|+.+++++ .|++.+|+++.||+||+|+|+..+..|+++. ..+....+.+
T Consensus 111 ~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~--~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l 185 (342)
T 3qj4_A 111 ISSIIKHYLKES---GAEVYFRHRVTQINLRDDKW--EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQL 185 (342)
T ss_dssp TTHHHHHHHHHH---TCEEESSCCEEEEEECSSSE--EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEE--EEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHH
Confidence 667777777655 89999999999999865553 4888888778999999999999999999752 2455667899
Q ss_pred ccCCCCCEEEEEEEEecCCCCCCCceeec
Q 016871 349 EKLVGVPVINIHIWFDRKLKNTYDHLLFS 377 (381)
Q Consensus 349 ~~l~~~~~~~v~l~~~~~~~~~~~~~~~~ 377 (381)
.++.|.+..+|++.|++++|......++.
T Consensus 186 ~~~~~~~~~~v~l~~~~~~~~~~~~~g~~ 214 (342)
T 3qj4_A 186 EAVSYSSRYALGLFYEAGTKIDVPWAGQY 214 (342)
T ss_dssp HTCCBCCEEEEEEECSSCC--CCSCSEEE
T ss_pred hcCCccccEEEEEEECCCCccCCceeeEE
Confidence 99999999999999999876555555554
No 25
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.82 E-value=2.5e-21 Score=181.84 Aligned_cols=269 Identities=14% Similarity=0.134 Sum_probs=170.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHC-CCceEEEeccccCCceeeeeeCC-CCCee-ecceeeeccCCccHHHHHHHhCCCc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~-g~~v~~~e~~~~~gg~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~~gl~~ 132 (381)
..+||+|||||++||+||+.|++. |++|+|+|+++++||++.+.... +|..+ +.|++++...++.+.++++++|+..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~~ 85 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFT 85 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCBC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhhh
Confidence 468999999999999999999999 99999999999999999987754 68877 4999999887888999999998732
Q ss_pred ccceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHH-HhhhhhhhhhcCcchhhccccccHHH
Q 016871 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK-FAIGLLPAIIGGQAYVEAQDGLTVQE 211 (381)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~ 211 (381)
. +... ..+.. +++... +|.....+..++... .. .+... .+....... ...+..++.+
T Consensus 86 ~--~~~~-~~~~~---~G~~~~------~p~~~~~~~~l~~~~--~~-~~~~~~~l~~~~~~~-------~~~~~~s~~e 143 (399)
T 1v0j_A 86 D--YRHR-VFAMH---NGQAYQ------FPMGLGLVSQFFGKY--FT-PEQARQLIAEQAAEI-------DTADAQNLEE 143 (399)
T ss_dssp C--CCCC-EEEEE---TTEEEE------ESSSHHHHHHHHTSC--CC-HHHHHHHHHHHGGGS-------CTTC----CC
T ss_pred c--cccc-eEEEE---CCEEEe------CCCCHHHHHHHhccc--CC-HHHHHHHHHHHhhcc-------CCCCcccHHH
Confidence 1 1111 11111 111111 122222333443321 11 12222 111111110 1234578889
Q ss_pred HHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhcccCC---Cce-EEecCCcCccchHHHHHHHHhcCC
Q 016871 212 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG---SKM-AFLDGNPPERLCLPIVEHIQSLGG 287 (381)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~-~~~~~~~~~~l~~~l~~~l~~~G~ 287 (381)
|+.+. +.+.+.+.++.++....++.+++++++.... .+...+....+ ..+ .++.+| +.+++++|++ +.|+
T Consensus 144 ~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~-~~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~ 217 (399)
T 1v0j_A 144 KAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANIT-RLPVRYTFDNRYFSDTYEGLPTDG-YTAWLQNMAA---DHRI 217 (399)
T ss_dssp HHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCS-CCCCCSSSCCCSCCCSEEECBTTH-HHHHHHHHTC---STTE
T ss_pred HHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhh-cceeEeccccchhhhhhccccccc-HHHHHHHHHh---cCCe
Confidence 99874 6778888899999888888898888865431 00000000111 123 244444 6666666664 3578
Q ss_pred EEEecceeeEEEEcCCCCEEEEEEeCCeEE-EecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEEecC
Q 016871 288 EVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRK 366 (381)
Q Consensus 288 ~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i-~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~ 366 (381)
+|++|++|++|... | . ++ .||+||+|+|+..+..+ .+..++|.++..+.+.++.|
T Consensus 218 ~I~l~~~V~~I~~~-------v----~-~~~~aD~VI~t~p~~~l~~~------------~l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 218 EVRLNTDWFDVRGQ-------L----R-PGSPAAPVVYTGPLDRYFDY------------AEGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp EEECSCCHHHHHHH-------H----T-TTSTTCCEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSS
T ss_pred EEEECCchhhhhhh-------h----h-hcccCCEEEECCcHHHHHhh------------hhCCCCcceEEEEEEEEccc
Confidence 99999999999642 2 1 35 79999999999977665 23567888888889999887
Q ss_pred CCCCCCceee
Q 016871 367 LKNTYDHLLF 376 (381)
Q Consensus 367 ~~~~~~~~~~ 376 (381)
.........|
T Consensus 274 ~~~~~~~~~~ 283 (399)
T 1v0j_A 274 DFQGTAVMNY 283 (399)
T ss_dssp CSSSSSEEEE
T ss_pred cCCCCeEEEe
Confidence 5433333333
No 26
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.82 E-value=3.1e-20 Score=182.96 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=67.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCC--------CceEEEeccc-cC----------------CceeeeeeCC------CCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAG--------HKPLLLEARD-VL----------------GGKIAAWKDG------DGD 105 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g--------~~v~~~e~~~-~~----------------gg~~~~~~~~------~g~ 105 (381)
..+|+|||||++||+||+.|++.| ++|+|+|+++ ++ ||++.+.... ++.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~~ 135 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGDT 135 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCCc
Confidence 478999999999999999999998 9999999999 99 9999886542 468
Q ss_pred eeecceeeeccCCccHHHHHHHh-CCC
Q 016871 106 WYETGLHIFFGAYPNIQNLFGEL-GIN 131 (381)
Q Consensus 106 ~~d~G~~~~~~~~~~~~~l~~~~-gl~ 131 (381)
.+|.|++++...+..+.++++++ |++
T Consensus 136 ~~e~G~~~~~~~~~~~~~~~~~l~gl~ 162 (721)
T 3ayj_A 136 IYEVGAMRFPEIAGLTWHYASAAFGDA 162 (721)
T ss_dssp EEECSCCCEETTCHHHHHHHHHHHCTT
T ss_pred EEecCCEEecCccHHHHHHHHHhcCCc
Confidence 89999999998778889999999 986
No 27
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.81 E-value=1.2e-19 Score=169.41 Aligned_cols=251 Identities=17% Similarity=0.186 Sum_probs=165.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCC-CCCee-ecceeeeccCCccHHHHHHHhCCCccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGINDRL 134 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~~gl~~~~ 134 (381)
.+||+|||||++|+++|+.|++.|++|+|+|+++.+||++.+.... .|..+ +.|+|++...++.+.++++++|....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~- 81 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMMP- 81 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCEEE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhhcc-
Confidence 4799999999999999999999999999999999999999887643 67765 89999999888889999999985211
Q ss_pred ceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHHHHH
Q 016871 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (381)
+... ..... ++.... +|.....+..++... ....+.......... .. ..+..++.+|+.
T Consensus 82 -~~~~-~~~~~---~g~~~~------~P~~~~~~~~l~~~~--~~~~~~~~~l~~~~~----~~----~~~~~sl~e~~~ 140 (384)
T 2bi7_A 82 -YVNR-VKATV---NGQVFS------LPINLHTINQFFSKT--CSPDEARALIAEKGD----ST----IADPQTFEEEAL 140 (384)
T ss_dssp -CCCC-EEEEE---TTEEEE------ESCCHHHHHHHTTCC--CCHHHHHHHHHHHSC----CS----CSSCCBHHHHHH
T ss_pred -cccc-eEEEE---CCEEEE------CCCChhHHHHHhccc--CCHHHHHHHHHHhhh----cc----CCCCcCHHHHHH
Confidence 1110 01110 111111 122233333333221 122222112211111 00 235679999998
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHH-h-hc-ccCCCceE-EecCCcCccchHHHHHHHHhcCCEEE
Q 016871 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR-F-LQ-EKHGSKMA-FLDGNPPERLCLPIVEHIQSLGGEVR 290 (381)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~g~~~~-~~~~~~~~~l~~~l~~~l~~~G~~i~ 290 (381)
+. +.+.+.+.++.++....+..++++++..... .+.. + .. ......+. ++.+| ...++++|++ +.|++|+
T Consensus 141 ~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~-r~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~~I~ 214 (384)
T 2bi7_A 141 RF-IGKELYEAFFKGYTIKQWGMQPSELPASILK-RLPVRFNYDDNYFNHKFQGMPKCG-YTQMIKSILN---HENIKVD 214 (384)
T ss_dssp HH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCC-SCCCCSSSCCCSCCCSEEEEETTH-HHHHHHHHHC---STTEEEE
T ss_pred Hh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHh-ccccccccccccccccccEEECcC-HHHHHHHHHh---cCCCEEE
Confidence 86 7788899999999999999999998876421 0000 0 00 01112332 55554 6677666664 3578999
Q ss_pred ecceee-EEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEEe
Q 016871 291 LNSRVQ-KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD 364 (381)
Q Consensus 291 ~~t~V~-~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~ 364 (381)
++++|+ +|.. .+|+||+|+|+..+..++ +..++|.+...+++.+|
T Consensus 215 l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 215 LQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp ESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEEE
T ss_pred ECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEEEEeC
Confidence 999999 8852 299999999999777652 34577888888888887
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.81 E-value=1.4e-20 Score=174.61 Aligned_cols=255 Identities=16% Similarity=0.142 Sum_probs=166.9
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeee-cceeeeccCCccHHHHHHHhCCCcccce
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYE-TGLHIFFGAYPNIQNLFGELGINDRLQW 136 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d-~G~~~~~~~~~~~~~l~~~~gl~~~~~~ 136 (381)
+||+|||||++|+++|+.|++.|++|+|+|+++.+||++.+.. .+|..++ .|+|++...++.+.+++++++.... +
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~--~ 78 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNR--F 78 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ETTEEEETTSCCCEEESCHHHHHHHHTTSCBCC--C
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cCCceeeccCCceecCCCHHHHHHHHHhhhhhh--c
Confidence 6999999999999999999999999999999999999998866 4678885 8999998777788888888875322 1
Q ss_pred eecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHHHHHHc
Q 016871 137 KEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQ 216 (381)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~ 216 (381)
......+ . ++... . +|.....+..++... ...+........... ....+..++.+|+.+.
T Consensus 79 ~~~~~~~-~---~g~~~--~----~p~~~~~~~~l~~~~---~~~~~~~~l~~~~~~-------~~~~~~~s~~~~~~~~ 138 (367)
T 1i8t_A 79 TNSPLAI-Y---KDKLF--N----LPFNMNTFHQMWGVK---DPQEAQNIINAQKKK-------YGDKVPENLEEQAISL 138 (367)
T ss_dssp CCCCEEE-E---TTEEE--E----SSBSHHHHHHHHCCC---CHHHHHHHHHHHTTT-------TCCCCCCSHHHHHHHH
T ss_pred cccceEE-E---CCeEE--E----cCCCHHHHHHHhccC---CHHHHHHHHHHHhhc-------cCCCCCccHHHHHHHH
Confidence 1111111 0 11111 1 122233344443321 111121111111111 1123567999999887
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhh--cccC-CCceE-EecCCcCccchHHHHHHHHhcCCEEEec
Q 016871 217 GVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL--QEKH-GSKMA-FLDGNPPERLCLPIVEHIQSLGGEVRLN 292 (381)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~-~~~~~~~~~l~~~l~~~l~~~G~~i~~~ 292 (381)
+.+.+.+.++.++...+++.+++++++.... .+.... .... ...+. ++.+| ...++++|++ |++|++|
T Consensus 139 -~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~-~l~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~-----g~~i~l~ 210 (367)
T 1i8t_A 139 -VGEDLYQALIKGYTEKQWGRSAKELPAFIIK-RIPVRFTFDNNYFSDRYQGIPVGG-YTKLIEKMLE-----GVDVKLG 210 (367)
T ss_dssp -HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSC-CCCBCSSSCCCSCCCSEEECBTTC-HHHHHHHHHT-----TSEEECS
T ss_pred -HhHHHHHHHHHHHHhhhhCCChHHcCHHHHh-hceeeeccccccccchhhcccCCC-HHHHHHHHhc-----CCEEEeC
Confidence 6778888899999999999999998865331 000000 0011 12232 55554 6666666654 6899999
Q ss_pred ceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEEecCCC
Q 016871 293 SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLK 368 (381)
Q Consensus 293 t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~ 368 (381)
++|++|.. . | ++.+|+||+|+++..+..+ .+..++|.+...+++.++++..
T Consensus 211 ~~V~~i~~---~----v------~~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 211 IDFLKDKD---S----L------ASKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFETERHEFPNF 261 (367)
T ss_dssp CCGGGSHH---H----H------HTTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred Cceeeech---h----h------hccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEEEEeccccC
Confidence 99998863 1 2 2469999999999866543 2456888888889999988754
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.79 E-value=2e-19 Score=167.10 Aligned_cols=264 Identities=19% Similarity=0.209 Sum_probs=171.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCee-ecceeeeccCCccHHHHHHHhCCCcc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWY-ETGLHIFFGAYPNIQNLFGELGINDR 133 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~-d~G~~~~~~~~~~~~~l~~~~gl~~~ 133 (381)
...+||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.+.....|..+ +.|+|++...++.+.++++++|....
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 106 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWRP 106 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEEE
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhccc
Confidence 45789999999999999999999999999999999999999987664567764 99999998888889999999984321
Q ss_pred cceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHHHH
Q 016871 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 213 (381)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 213 (381)
. .. ...... ++++.. +|.....+..++.. ........... .. ......+..++.+|+
T Consensus 107 ~--~~-~~~~~~---~g~l~~------lP~~~~~~~~l~~~--~~~~~~~~~~l----~~-----~~~~~~~~~s~~e~~ 163 (397)
T 3hdq_A 107 Y--QH-RVLASV---DGQLLP------IPINLDTVNRLYGL--NLTSFQVEEFF----AS-----VAEKVEQVRTSEDVV 163 (397)
T ss_dssp C--CC-BEEEEE---TTEEEE------ESCCHHHHHHHHTC--CCCHHHHHHHH----HH-----HCCCCSSCCBHHHHH
T ss_pred c--cc-cceEEE---CCEEEE------cCCChHHHHHhhcc--CCCHHHHHHHH----hh-----cccCCCCCcCHHHHH
Confidence 1 11 111111 122211 23233333333331 11222111111 11 011234568999999
Q ss_pred HHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhc--cc-CCCce-EEecCCcCccchHHHHHHHHhcCCEE
Q 016871 214 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EK-HGSKM-AFLDGNPPERLCLPIVEHIQSLGGEV 289 (381)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~g~~~-~~~~~~~~~~l~~~l~~~l~~~G~~i 289 (381)
.+. +..++.+.++.+++.+.++.+++++++.+.. .+..... .. +.... .++.+| ..+++++|+ +..|++|
T Consensus 164 ~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P~gG-y~~l~e~l~---~~~g~~V 237 (397)
T 3hdq_A 164 VSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMPLHG-YTRMFQNML---SSPNIKV 237 (397)
T ss_dssp HHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEETTC-HHHHHHHHT---CSTTEEE
T ss_pred HHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCcccccCccchhhhheeccCCC-HHHHHHHHH---hccCCEE
Confidence 875 6678889999999999999999999976331 1110000 00 01122 245444 555555553 3358999
Q ss_pred EecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEEecCCCC
Q 016871 290 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN 369 (381)
Q Consensus 290 ~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~ 369 (381)
++|++|+++ +.++.+|+||+|+|...+... ....+.|.+...+++.++.+...
T Consensus 238 ~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~~~~~~~~ 290 (397)
T 3hdq_A 238 MLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHETHDTEQLL 290 (397)
T ss_dssp EESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSCSC
T ss_pred EECCeEEec---------------cccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEEeccccCC
Confidence 999999833 225679999999998755321 34578888999999999987664
Q ss_pred CCCce
Q 016871 370 TYDHL 374 (381)
Q Consensus 370 ~~~~~ 374 (381)
....+
T Consensus 291 ~~~~v 295 (397)
T 3hdq_A 291 PTGTV 295 (397)
T ss_dssp SSSEE
T ss_pred CCeEE
Confidence 43333
No 30
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.78 E-value=4.7e-18 Score=171.88 Aligned_cols=77 Identities=30% Similarity=0.452 Sum_probs=66.1
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCcc-HHHHHHHhCCCc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPN-IQNLFGELGIND 132 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~-~~~l~~~~gl~~ 132 (381)
...+||+|||||++||+||+.|++.|++|+|+|+++.+||++.++. ..++.+|.|++++.+...+ +..+.+++|++.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~l~~~lg~~~ 353 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR-KGNYVADLGAMVVTGLGGNPMAVVSKQVNMEL 353 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEE-ETTEEEESSCCEECCSBTCHHHHHHHHTTCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeec-ccccchhcCceEecCCCCchHHHHHHHhCCch
Confidence 4567999999999999999999999999999999999999988776 4678899999998765333 567788888753
No 31
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.77 E-value=7.6e-18 Score=167.90 Aligned_cols=77 Identities=30% Similarity=0.452 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCcc-HHHHHHHhCCCc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPN-IQNLFGELGIND 132 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~-~~~l~~~~gl~~ 132 (381)
...+||+|||||++||+||+.|++.|++|+|+|+++.+||++.++. ..++.+|.|++++.+...+ +..+.+++|++.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~l~~~l~~~~ 182 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR-KGNYVADLGAMVVTGLGGNPMAVVSKQVNMEL 182 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEE-ETTEEEESSCCEECCSBTCHHHHHHHHHTCCE
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccc-ccCchhhcCcEEEeCCCCchHHHHHHHhCcch
Confidence 4578999999999999999999999999999999999999988776 4678899999998765433 567888898753
No 32
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.75 E-value=4.6e-17 Score=149.30 Aligned_cols=200 Identities=17% Similarity=0.254 Sum_probs=129.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCccc-c
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL-Q 135 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~~-~ 135 (381)
.+||+|||||++|+++|+.|++.|.+|+|+|+++.+||++.+.. ..+..++.|...+....+.+.++++++...... .
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe-cCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 46999999999999999999999999999999999999877644 345566777666654444454544443211000 0
Q ss_pred eeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCcchhhccccccHHHHHHH
Q 016871 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (381)
|.. .+. .....
T Consensus 81 ~~~------------~~~-------------------------------------------------~~~~~-------- 91 (336)
T 1yvv_A 81 WTP------------LLY-------------------------------------------------NFHAG-------- 91 (336)
T ss_dssp ECC------------CEE-------------------------------------------------EESSS--------
T ss_pred ccc------------cce-------------------------------------------------eccCc--------
Confidence 000 000 00000
Q ss_pred cCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhcccCCCceEEecCCcCccchHHHHHHHHhcCCEEEeccee
Q 016871 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 295 (381)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~l~~~G~~i~~~t~V 295 (381)
. ..... .+ ...+.... -...+.+.+.+ |++|+++++|
T Consensus 92 -~-------------------~~~~~-----------------~~-~~~~~~~~----~~~~l~~~l~~-g~~i~~~~~v 128 (336)
T 1yvv_A 92 -R-------------------LSPSP-----------------DE-QVRWVGKP----GMSAITRAMRG-DMPVSFSCRI 128 (336)
T ss_dssp -B-------------------CCCCC-----------------TT-SCEEEESS----CTHHHHHHHHT-TCCEECSCCE
T ss_pred -c-------------------cccCC-----------------CC-CccEEcCc----cHHHHHHHHHc-cCcEEecCEE
Confidence 0 00000 00 00111111 12334444433 7899999999
Q ss_pred eEEEEcCCCCEEEEEEeCCeEEE-ecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEEecCCCCCCCce
Q 016871 296 QKIELNDDGTVKNFLLTNGNVID-GDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHL 374 (381)
Q Consensus 296 ~~I~~~~~~~~~~V~t~~G~~i~-ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~ 374 (381)
++|+.+++++ .|++.+|+.+. ||+||+|+|++.+.++++.. ......+..+.|.+..++++.|++|+|......
T Consensus 129 ~~i~~~~~~~--~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (336)
T 1yvv_A 129 TEVFRGEEHW--NLLDAEGQNHGPFSHVIIATPAPQASTLLAAA---PKLASVVAGVKMDPTWAVALAFETPLQTPMQGC 203 (336)
T ss_dssp EEEEECSSCE--EEEETTSCEEEEESEEEECSCHHHHGGGGTTC---HHHHHHHTTCCEEEEEEEEEEESSCCSCCCCEE
T ss_pred EEEEEeCCEE--EEEeCCCcCccccCEEEEcCCHHHHHHhhccC---HHHHHHHhhcCccceeEEEEEecCCCCCCCCeE
Confidence 9999866653 48888887654 89999999999888888652 235577889999999999999999987554443
No 33
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.74 E-value=1.4e-15 Score=148.07 Aligned_cols=216 Identities=17% Similarity=0.180 Sum_probs=129.8
Q ss_pred HHHHHHHhCCCcccceeecceeeecCCCCCccccccCCCCCCCchhhHHHHHhcCCCCChHHHHHHhhhhhhhhhcCc--
Q 016871 121 IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQ-- 198 (381)
Q Consensus 121 ~~~l~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (381)
+.+++.+.|+...+.|......+.... +.+. .+|. ....++.. ..+.+.++..+...+ .......
T Consensus 239 lv~LL~~sgV~~yLEFk~v~~~y~~~~--G~~~------~VPa---s~~eif~s-~~Lsl~EKr~L~kFl-~~~~~~~~~ 305 (650)
T 1vg0_A 239 LIDLLIKSNVSRYAEFKNITRILAFRE--GTVE------QVPC---SRADVFNS-KQLTMVEKRMLMKFL-TFCVEYEEH 305 (650)
T ss_dssp HHHHHHHHTGGGGCCEEECCEEEEESS--SSEE------ECCC---SHHHHHHC-SSSCHHHHHHHHHHH-HHHHTGGGC
T ss_pred HHHHHHHcCCcceeeEEEccceEEecC--CCEe------ECCC---CHHHHHhC-cCCCHHHHHHHHHHH-HHHHHhccC
Confidence 677777888777777766555554422 2111 1222 23344443 666666665543322 2211111
Q ss_pred -chhhccccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHhhc--ccCC-CceEEecCCcCccc
Q 016871 199 -AYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKHG-SKMAFLDGNPPERL 274 (381)
Q Consensus 199 -~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g-~~~~~~~~~~~~~l 274 (381)
..+...+..++.+|+++.+..+.+.. ++.... +.. .....+....+..+..++. ..+| ..+.|+.|| ...|
T Consensus 306 p~~~~~~d~~S~~d~L~~~~ls~~L~~-~L~~~l-al~--~~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG-~g~L 380 (650)
T 1vg0_A 306 PDEYRAYEGTTFSEYLKTQKLTPNLQY-FVLHSI-AMT--SETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYG-QGEL 380 (650)
T ss_dssp HHHHHTTTTSBHHHHHTTSSSCHHHHH-HHHHHT-TC----CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTC-TTHH
T ss_pred hHHHhhhccCCHHHHHHHhCCCHHHHH-HHHHHH-hcc--CCCCCchhHHHHHHHHHHHHHHhhccCceEEeCCc-hhHH
Confidence 12235578999999999877766443 332221 211 1222234443333333332 2233 367777776 9999
Q ss_pred hHHHHHHHHhcCCEEEecceeeEEEEcCC-CCEEEEEEeCCeEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCC
Q 016871 275 CLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVG 353 (381)
Q Consensus 275 ~~~l~~~l~~~G~~i~~~t~V~~I~~~~~-~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~ 353 (381)
+++|.+.+.+.|++|+++++|++|..+++ +++++|.+.+|+++.||+||++. .+ +|... ..++++
T Consensus 381 ~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~-~~-----lp~~~--------~~~~~~ 446 (650)
T 1vg0_A 381 PQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED-SY-----LSENT--------CSRVQY 446 (650)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG-GG-----BCTTT--------TTTCCC
T ss_pred HHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh-hh-----cCHhH--------hccccc
Confidence 99999999999999999999999998543 77888888889999999999832 22 23211 112234
Q ss_pred CCEEEEEEEEecCCC
Q 016871 354 VPVINIHIWFDRKLK 368 (381)
Q Consensus 354 ~~~~~v~l~~~~~~~ 368 (381)
..+.++.+.+++|+.
T Consensus 447 ~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 447 RQISRAVLITDGSVL 461 (650)
T ss_dssp EEEEEEEEEESSCSS
T ss_pred cceEEEEEEecCCCC
Confidence 457788889999875
No 34
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.73 E-value=2.7e-17 Score=151.57 Aligned_cols=80 Identities=33% Similarity=0.578 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEecc-ccCCceeeeeeC---------CCCCeeecceeeeccCCccHHHH
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR-DVLGGKIAAWKD---------GDGDWYETGLHIFFGAYPNIQNL 124 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~-~~~gg~~~~~~~---------~~g~~~d~G~~~~~~~~~~~~~l 124 (381)
+..+||+|||||++||+||+.|++.|++|+|+|++ +.+||++.+... ..+..++.|++++...++.+.++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~ 121 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLAL 121 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHH
Confidence 46789999999999999999999999999999999 999999988763 25788999999998778889999
Q ss_pred HHHhCCCccc
Q 016871 125 FGELGINDRL 134 (381)
Q Consensus 125 ~~~~gl~~~~ 134 (381)
++++|+....
T Consensus 122 ~~~lGl~~~~ 131 (376)
T 2e1m_A 122 IDKLGLKRRL 131 (376)
T ss_dssp HHHTTCCEEE
T ss_pred HHHcCCCcce
Confidence 9999987643
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.62 E-value=3.2e-15 Score=142.17 Aligned_cols=64 Identities=13% Similarity=0.193 Sum_probs=55.8
Q ss_pred CccchHHHHHHHHhcCCEEEecc---eeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCC
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 336 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t---~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~ 336 (381)
+..++..|.+.++++|++|++++ +|++|..+ ++.+.+|+|.+|+++.||+||+|+|+| ...|++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~-s~~l~~ 226 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGAS-AGQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGG-GGGTSC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCC-hhhhcC
Confidence 56889999999999999999999 99999984 556667999999889999999999999 556654
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.58 E-value=3.2e-14 Score=142.51 Aligned_cols=63 Identities=16% Similarity=0.145 Sum_probs=53.9
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCC
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 336 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~ 336 (381)
+..++..|.+.+++.|++|+++++|++|..++++ +.|++.+|+++.||.||+|+|.+ ...+..
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~i~Ad~VVlAtG~~-s~~l~~ 478 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC--WLLNFAGDQQATHSVVVLANGHQ-ISRFSQ 478 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCGGG-GGCSTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe--EEEEECCCCEEECCEEEECCCcc-hhcccc
Confidence 5789999999999999999999999999985554 46888887789999999999999 555544
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.58 E-value=1.6e-15 Score=141.31 Aligned_cols=57 Identities=18% Similarity=0.084 Sum_probs=50.7
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
+.+++.+|.+.++++|++|+++++|++|..++++ +.|+|.+| ++.||+||+|+|+|.
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~--~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA--WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE--EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe--EEEEeCCC-EEEcCEEEECCChhH
Confidence 6789999999999999999999999999985444 56888888 899999999999983
No 38
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.56 E-value=1.2e-14 Score=134.60 Aligned_cols=62 Identities=10% Similarity=0.094 Sum_probs=52.2
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCC--eEEEecEEEEccCHHHHhcc
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDILKLQ 334 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G--~~i~ad~VI~A~~~~~~~~L 334 (381)
+..++..|.+.++++|++|+++++|++|..++++.+ .|.+.+| .++.||+||+|+|.| ...|
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~-s~~l 212 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLH-APGL 212 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGG-HHHH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcc-hHHH
Confidence 568899999999999999999999999998655533 4888888 489999999999998 4444
No 39
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.55 E-value=4.7e-14 Score=131.07 Aligned_cols=63 Identities=21% Similarity=0.223 Sum_probs=53.4
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCC
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE 337 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~ 337 (381)
+.++++.|.+.+++.|++|+++++|++|..++++ +.|+|.+| ++.||+||+|+|+| ...|++.
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~-s~~l~~~ 210 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTW-VKDLLPE 210 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGG-GGGTSTT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCcc-HHhhccc
Confidence 5688999999999999999999999999985554 35888888 69999999999999 5566653
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.54 E-value=9.1e-14 Score=139.37 Aligned_cols=63 Identities=14% Similarity=0.117 Sum_probs=53.3
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCe-EEEecEEEEccCHHHHhccCC
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDILKLQLP 336 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~-~i~ad~VI~A~~~~~~~~Ll~ 336 (381)
+.+++.+|.+.+++.|++|+++++|++|..++++ +.|+|.+|+ ++.||.||+|+|.+ ...++.
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~-s~~l~~ 474 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHR-LPEWEQ 474 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGG-TTCSTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcc-hhcccc
Confidence 5789999999999999999999999999986555 368888887 89999999999999 555544
No 41
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.53 E-value=1.2e-13 Score=129.82 Aligned_cols=58 Identities=14% Similarity=0.181 Sum_probs=50.8
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
+..++..|.+.+++.|++|+++++|++|..+ ++.+++|++.+| ++.||.||+|+|.+.
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 5588899999999999999999999999984 455667888888 899999999999873
No 42
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.53 E-value=8.1e-14 Score=130.70 Aligned_cols=56 Identities=16% Similarity=0.172 Sum_probs=48.2
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+..++..|.+.+++.|++|+++++|++|..++++ +.|+|.+| +++||.||+|+|+|
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~--v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDADG--VSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE--EEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe--EEEEECCC-EEEcCEEEEcCCcC
Confidence 5678899999999999999999999999985444 34778777 89999999999988
No 43
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.52 E-value=1e-13 Score=129.36 Aligned_cols=58 Identities=16% Similarity=0.176 Sum_probs=50.8
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
+.++++.|.+.++++|++|+++++|++|..+ ++.+.+|+|.+| ++.||+||+|+|.+.
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhH
Confidence 6688999999999999999999999999984 455656888888 899999999999883
No 44
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.52 E-value=1.1e-13 Score=129.25 Aligned_cols=61 Identities=18% Similarity=0.199 Sum_probs=50.9
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccC
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 335 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll 335 (381)
+.+++..|.+.++++|++|+++++|++|..++++ +.|+|.+| ++.||.||+|+|.+ ...|+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~-~~~l~ 209 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAW-NSKLL 209 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGG-HHHHG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCcc-HHHHh
Confidence 5688999999999999999999999999985554 34778777 89999999999988 34443
No 45
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.51 E-value=2.9e-13 Score=131.05 Aligned_cols=58 Identities=26% Similarity=0.326 Sum_probs=49.1
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCC-e--EEEec-EEEEccCHHH
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-N--VIDGD-AYVFATPVDI 330 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G-~--~i~ad-~VI~A~~~~~ 330 (381)
.++..|.+.++++|++|+++++|++|..++++++++|.+.++ + +|.|| .||+|+|.+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788999999999999999999999999865677888877544 2 58995 9999998773
No 46
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.51 E-value=7.3e-14 Score=133.01 Aligned_cols=59 Identities=24% Similarity=0.443 Sum_probs=50.5
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
...+.+.|.+.+++.|++|+++++|++|..+ ++.+++|++.+|++++||.||+|+|.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 3577888999999999999999999999974 5555679998887799999999998764
No 47
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.51 E-value=1.2e-13 Score=135.03 Aligned_cols=59 Identities=19% Similarity=0.188 Sum_probs=50.4
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeC---C--eEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~---G--~~i~ad~VI~A~~~~~ 330 (381)
+.+++..|++.+.++|++|+++++|++|..+ ++.+++|++.+ | .+++||.||+|+|+|+
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 6789999999999999999999999999984 55566787764 3 3799999999999983
No 48
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.49 E-value=5.7e-13 Score=130.61 Aligned_cols=60 Identities=27% Similarity=0.281 Sum_probs=49.4
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe--CCe--EEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~--~G~--~i~ad~VI~A~~~~~ 330 (381)
...+...|.+.+++.|++|+++++|++|..++++.+++|++. +|+ ++.||.||+|+|.+.
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 346788899999999999999999999998543677677765 675 689999999998763
No 49
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.48 E-value=1e-12 Score=128.97 Aligned_cols=59 Identities=22% Similarity=0.268 Sum_probs=49.3
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe--CCe--EEEecEEEEccCHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVD 329 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~--~G~--~i~ad~VI~A~~~~ 329 (381)
...+...|.+.+++.|++|+++++|++|..++++++++|.+. +|+ +|.||.||+|+|.+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 357888899999999999999999999998554777777665 675 68999999999876
No 50
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.48 E-value=3.6e-13 Score=125.56 Aligned_cols=56 Identities=21% Similarity=0.271 Sum_probs=48.6
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+..+.+.|.+.+++.|++|+++++|++|..++++ + .|++.+| ++.||.||+|+|.+
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEA-L-FIKTPSG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSS-E-EEEETTE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCE-E-EEEcCCc-eEEcCEEEECCChh
Confidence 4678899999999999999999999999875443 4 6888777 89999999999987
No 51
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.46 E-value=2.7e-13 Score=127.50 Aligned_cols=57 Identities=16% Similarity=0.303 Sum_probs=48.7
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
...+.+.|.+.+++.|++|+++++|++|..++++ +.|.+.+| ++.||.||+|+|.+.
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECCCCcc
Confidence 4577888999999999999999999999985444 45888888 899999999999764
No 52
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.44 E-value=3.9e-13 Score=137.63 Aligned_cols=58 Identities=24% Similarity=0.237 Sum_probs=51.3
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
+.+++.+|.+.++++|++|+++++|++|..+ ++.+++|.|.+| ++.||+||+|+|+|.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccch
Confidence 6689999999999999999999999999984 455567888888 899999999999984
No 53
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.43 E-value=5.8e-13 Score=126.93 Aligned_cols=59 Identities=22% Similarity=0.258 Sum_probs=50.6
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEc--------------CCCCEEEEEEeCCeEE--EecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~--------------~~~~~~~V~t~~G~~i--~ad~VI~A~~~~~ 330 (381)
+.+++..|.+.++++|++|+++++|++|..+ +++.+++|.|.+| ++ .||.||+|+|+|+
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 5689999999999999999999999999872 2444567888888 78 9999999999983
No 54
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.42 E-value=5.7e-13 Score=130.45 Aligned_cols=62 Identities=6% Similarity=0.012 Sum_probs=50.4
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe---CCe--EEEecEEEEccCHHHHhcc
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDILKLQ 334 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~---~G~--~i~ad~VI~A~~~~~~~~L 334 (381)
+.+++..+++.+.++|++|+++++|++|..+ ++.+++|++. +|+ +++||.||+|+|+| ...+
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w-s~~l 253 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPW-VDKV 253 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGG-HHHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChh-HHHH
Confidence 6688999999999999999999999999984 4556667653 343 69999999999999 4444
No 55
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.39 E-value=9.3e-13 Score=131.98 Aligned_cols=91 Identities=23% Similarity=0.248 Sum_probs=67.4
Q ss_pred cccccccCCCCCceeeccCCCC--------CCCCcccchhhhhhhcc--CCCCCCCCCCCCeEEEEcCChhHHHHHHHHH
Q 016871 8 RVKTGTRKGFCPSKVVCVDYPR--------PDIDNTSNFLEAAYLSS--SFRTSPRPSKPLKVVIAGAGLAGLSTAKYLA 77 (381)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~iiG~G~~G~~~a~~l~ 77 (381)
.|++|.+.|+.+.+.+|..|+. ....|..++....+... .+....+....+||+|||||++|++||+.|+
T Consensus 332 ~~~~~~~~g~~~~i~~c~~c~~C~~~~~~~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La 411 (690)
T 3k30_A 332 FLPNKIRDGRLNLIRECIGCNICVSGDLTMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALG 411 (690)
T ss_dssp THHHHHHTTCGGGCCCCCCCCHHHHHHHTTSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHH
T ss_pred cHHHHHHcCCccccccccchhhhhhcccCCCcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHH
Confidence 3899999999999999999863 22334455443322111 0111123346789999999999999999999
Q ss_pred HCCCceEEEeccccCCceeee
Q 016871 78 DAGHKPLLLEARDVLGGKIAA 98 (381)
Q Consensus 78 ~~g~~v~~~e~~~~~gg~~~~ 98 (381)
++|++|+|+|+++..||.+..
T Consensus 412 ~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 412 VRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp HHTCEEEEECSSSSSCTHHHH
T ss_pred HCCCeEEEEecCCCCCCEeee
Confidence 999999999999999987654
No 56
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.37 E-value=6.9e-12 Score=121.23 Aligned_cols=58 Identities=28% Similarity=0.480 Sum_probs=50.6
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+++|++.+|+++.||.||+|+|.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 467788999999999999999999999984 5556779999998899999999999874
No 57
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.34 E-value=2.6e-12 Score=121.37 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=52.3
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCe--EEEecEEEEccCHH-HHhccCC
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYVFATPVD-ILKLQLP 336 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~--~i~ad~VI~A~~~~-~~~~Ll~ 336 (381)
..+...|.+.+++.|++|+++++|++|..++++..+.|.+.+|+ +++||.||.|+|.+ .+.++++
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 46667788888888999999999999998666666678888896 69999999999977 3334443
No 58
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.33 E-value=6.4e-12 Score=117.62 Aligned_cols=58 Identities=14% Similarity=0.092 Sum_probs=48.1
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcC---CCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~---~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
...+.+.|.+.+++.|++|+++++|++|..++ ++. +.|++.+| +++||+||+|+|.+.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEECCCCcc
Confidence 56788889999999999999999999999741 233 45878777 899999999998775
No 59
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.33 E-value=2.6e-11 Score=118.76 Aligned_cols=58 Identities=29% Similarity=0.359 Sum_probs=47.4
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe--CCe--EEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~--~G~--~i~ad~VI~A~~~~ 329 (381)
..+...|.+.+++.|++|+++++|++|..++++.+++|.+. +|+ +|.||.||+|+|.+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 46788899999999999999999999987543667777765 674 58999999999866
No 60
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.31 E-value=1.5e-11 Score=115.05 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=45.1
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe---CCeEEEecEEEEccCHH
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGNVIDGDAYVFATPVD 329 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~---~G~~i~ad~VI~A~~~~ 329 (381)
.+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|++. ++.++.||.||.|+|.+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 55677888888889999999999999985 5555556663 44589999999999976
No 61
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.31 E-value=5.7e-11 Score=116.54 Aligned_cols=59 Identities=17% Similarity=0.068 Sum_probs=48.5
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEE---eCCe--EEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t---~~G~--~i~ad~VI~A~~~~~ 330 (381)
..+...|.+.+++.|++|+++++|++|..++++.+++|.. .+|+ ++.|+.||+|+|.+.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 4678889999988999999999999999853566767765 4564 589999999999873
No 62
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.31 E-value=8.1e-12 Score=117.48 Aligned_cols=53 Identities=23% Similarity=0.345 Sum_probs=43.2
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
.+.+.|.+.+.+ ++|+++++|++|+.++++ +.|++.+|+++.||.||.|.|.+
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECCCcC
Confidence 455667777765 789999999999985554 34888899899999999999976
No 63
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.30 E-value=5.4e-12 Score=121.86 Aligned_cols=61 Identities=21% Similarity=0.154 Sum_probs=50.9
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe---CCe--EEEecEEEEccCHHHHhcc
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDILKLQ 334 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~---~G~--~i~ad~VI~A~~~~~~~~L 334 (381)
+.+++..|.+.+.++|++|+++++|++|..++ .+++|++. +|+ +++||.||+|+|+| ...+
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~-s~~l 213 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPW-VKQF 213 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGG-HHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChh-HHHH
Confidence 67899999999999999999999999999843 35567773 565 79999999999999 4433
No 64
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.28 E-value=4.9e-11 Score=116.85 Aligned_cols=57 Identities=18% Similarity=0.208 Sum_probs=46.5
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe-CC--eEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~-~G--~~i~ad~VI~A~~~~ 329 (381)
..+...|.+.+++.|++++++++|++|..+ ++..++|++. +| .++.||.||.|+|.+
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSG 187 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCc
Confidence 356677888888899999999999999874 3444567776 66 479999999999977
No 65
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.27 E-value=2.1e-12 Score=121.32 Aligned_cols=57 Identities=16% Similarity=0.227 Sum_probs=44.9
Q ss_pred CccchHHHHHHHHhcCCEEEecceee---------EEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~---------~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
+..++..|.+.+++.|++|+++++|+ +|..++++ + .|+|.+| ++.||.||+|+|++.
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~-v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTH-Q-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCe-E-EEEECCc-EEECCEEEECCCccH
Confidence 56789999999999999999999999 88764333 3 6878777 899999999999883
No 66
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.25 E-value=1.9e-10 Score=111.41 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=51.2
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
...+...|.+.+++.|++++.+ +|++|..++++.+++|++.+|+++.||.||.|+|.+.
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 4577888899998899999999 9999998666767789898888899999999999873
No 67
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.24 E-value=7e-11 Score=114.80 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=44.7
Q ss_pred ccchHHHHHHHHh-cCCEEEecceeeEEEEcCCC------CEEEEEEe---CCe--EEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~------~~~~V~t~---~G~--~i~ad~VI~A~~~~~ 330 (381)
..+...|.+.+++ .|++|++++.|++|..++++ .+.+|.+. +|+ ++.|+.||+|+|.+.
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 4677778888888 69999999999999984334 67777765 565 689999999998773
No 68
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.24 E-value=1e-11 Score=109.94 Aligned_cols=68 Identities=26% Similarity=0.455 Sum_probs=56.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHH
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLF 125 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~ 125 (381)
++||+|||||++||+||+.|+++|++|+|+||++.+||++.+.. ..+..+|.|.+.+......+....
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~~~~~~~~~~~~~~~ 69 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCccccccCcHHHHHHH
Confidence 57999999999999999999999999999999999999987655 567788888887765444444333
No 69
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.23 E-value=1e-10 Score=112.71 Aligned_cols=62 Identities=11% Similarity=-0.007 Sum_probs=47.9
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCe---EEEecEEEEccCHHH-HhccCC
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQLP 336 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~---~i~ad~VI~A~~~~~-~~~Ll~ 336 (381)
.+...|.+.+.+.|++|+++++|++|+.++++.. |++.+|+ +++||.||.|.|.+. +.+++.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~--v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVV--VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEE--EEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEE--EEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 5566688888888999999999999998666533 6666664 799999999999773 444553
No 70
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.22 E-value=1.3e-10 Score=115.05 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=47.5
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEE---eCCe--EEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t---~~G~--~i~ad~VI~A~~~~~ 330 (381)
..+...|.+.+.+.|++|++++.|++|.. +++.+.+|.+ .+|+ ++.|+.||+|||.+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 36788899999889999999999999987 4566666665 4675 489999999998873
No 71
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.22 E-value=7.3e-11 Score=113.72 Aligned_cols=62 Identities=10% Similarity=0.070 Sum_probs=47.2
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCe---EEEecEEEEccCHH-HHhccCC
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVD-ILKLQLP 336 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~---~i~ad~VI~A~~~~-~~~~Ll~ 336 (381)
.+...|.+.+++.|++|+++++|++|+.++++. .|++.+|+ +++||.||.|.|.+ .+.+++.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v--~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGV--TVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEE--EEEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeE--EEEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 455667888888899999999999999865543 36666653 79999999999877 3444553
No 72
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.22 E-value=1.6e-10 Score=113.70 Aligned_cols=58 Identities=10% Similarity=0.078 Sum_probs=47.9
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEE---eCCe--EEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t---~~G~--~i~ad~VI~A~~~~~ 330 (381)
..+...|.+.+.+.|++|++++.|++|.. +++.+.+|.+ .+|+ ++.|+.||+|||.+.
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 46788899988889999999999999987 4566667766 3564 689999999999873
No 73
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.22 E-value=3.8e-11 Score=117.33 Aligned_cols=65 Identities=12% Similarity=0.098 Sum_probs=49.0
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCC-eEEEecEEEEccCHH-HHhccCC
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPVD-ILKLQLP 336 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G-~~i~ad~VI~A~~~~-~~~~Ll~ 336 (381)
..+.+.|.+.+++.|++|+++++|++|+.++++..+.+.+.+| ++++||.||.|.|.+ .+.++++
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 3556678888888899999999999999866665433333677 689999999999876 3444543
No 74
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.22 E-value=9.7e-11 Score=114.07 Aligned_cols=63 Identities=17% Similarity=0.217 Sum_probs=47.6
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCC--EEEEEEeCC---eEEEecEEEEccCHH-HHhccC
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT--VKNFLLTNG---NVIDGDAYVFATPVD-ILKLQL 335 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~--~~~V~t~~G---~~i~ad~VI~A~~~~-~~~~Ll 335 (381)
.+...|.+.+++.|++|+++++|++|+.++++. .+.+++.++ .+++||.||.|.|.+ .+.+.+
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 566678888888899999999999999865510 123555555 689999999999977 344454
No 75
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.21 E-value=3.4e-11 Score=117.12 Aligned_cols=42 Identities=31% Similarity=0.432 Sum_probs=38.6
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 97 (381)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~ 61 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWY 61 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 467999999999999999999999999999999999888653
No 76
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.21 E-value=7.3e-11 Score=110.61 Aligned_cols=64 Identities=19% Similarity=0.259 Sum_probs=50.5
Q ss_pred ccchHHHHHHHHhc-CCEEEecceeeEEEEcCCCCEE-EEEEeCCeEEEecEEEEccCHHH-HhccCC
Q 016871 272 ERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYVFATPVDI-LKLQLP 336 (381)
Q Consensus 272 ~~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~-~V~t~~G~~i~ad~VI~A~~~~~-~~~Ll~ 336 (381)
..+.+.|.+.+++. |++|+++++|++|+.++++. + .|++.+|++++||.||.|+|.+. +.+++.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v-~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHA-IDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSC-EEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCce-EEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 46677788888887 89999999999999865553 2 48888888899999999999763 344443
No 77
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.20 E-value=4.3e-11 Score=116.23 Aligned_cols=55 Identities=13% Similarity=0.085 Sum_probs=44.1
Q ss_pred hHHHHHHHHhcCC--EEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 275 CLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 275 ~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
.+.+.+.+++.|+ +++++++|+++..++++..+.|++.+|+++.||+||+|+|.+
T Consensus 90 ~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 90 LEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 3345555566677 899999999999866655667999999889999999999975
No 78
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.19 E-value=1.3e-10 Score=103.55 Aligned_cols=40 Identities=33% Similarity=0.425 Sum_probs=36.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHC-CCceEEEeccccCCce
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGK 95 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~-g~~v~~~e~~~~~gg~ 95 (381)
..+||+|||||++|+++|+.|++. |.+|+|+|+++.+||.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc
Confidence 457999999999999999999997 9999999999887764
No 79
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.19 E-value=1e-10 Score=114.71 Aligned_cols=57 Identities=25% Similarity=0.330 Sum_probs=48.0
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeC------C---------eEEEecEEEEccCHH
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------G---------NVIDGDAYVFATPVD 329 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~------G---------~~i~ad~VI~A~~~~ 329 (381)
.+...|.+.+++.|++|+++++|++|..++++.+++|.+.+ | .+++||.||.|.|.+
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 56777888888889999999999999986667777787763 3 579999999999976
No 80
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.18 E-value=3.1e-10 Score=110.54 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=50.9
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
...+...|.+.+++.|++++.+ .|++|..++++.++.|++.+|+++.||.||.|+|.+.
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 4578888999998899999999 8999998666666678888887899999999999873
No 81
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.18 E-value=3.1e-10 Score=106.25 Aligned_cols=62 Identities=23% Similarity=0.301 Sum_probs=46.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~ 132 (381)
..+||+|||||++|+++|..|++.|++|+|+|+++..... .|..+. ..+...++++++|+..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~-------------~~~g~~--l~~~~~~~l~~~g~~~ 65 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSG-------------FGTGIV--VQPELVHYLLEQGVEL 65 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCC-------------CSCEEE--CCHHHHHHHHHTTCCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc-------------cccccc--cChhHHHHHHHcCCcc
Confidence 4579999999999999999999999999999998763111 011111 1456678888888763
No 82
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.17 E-value=1.8e-10 Score=111.50 Aligned_cols=56 Identities=16% Similarity=0.095 Sum_probs=44.6
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEE--EeCCe--EEEecEEEEccCHH
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL--LTNGN--VIDGDAYVFATPVD 329 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~--t~~G~--~i~ad~VI~A~~~~ 329 (381)
.+...|.+.+++.|++|+++++|++|..+ ++.+.+|. +.+|+ +++||.||.|+|.+
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcc
Confidence 56677888888899999999999999984 44444444 44574 79999999999986
No 83
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.17 E-value=4.6e-10 Score=108.88 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=47.9
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCE--EEEEEeCCe-EEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~--~~V~t~~G~-~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.++++|++|+++++|++|..++++.+ +.|++.+|+ ++.||.||+|+|..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 46677888999999999999999999987545543 457788887 89999999999854
No 84
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.17 E-value=1.8e-10 Score=107.40 Aligned_cols=39 Identities=33% Similarity=0.631 Sum_probs=35.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
+.+||+|||||++|+++|+.|+++|++|+|+|+++.+|.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 358999999999999999999999999999999877654
No 85
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.16 E-value=1.7e-10 Score=105.97 Aligned_cols=40 Identities=33% Similarity=0.578 Sum_probs=37.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
.+||+|||||++|+++|+.|++.|++|+|+|+++.+||.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~ 42 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAW 42 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 4799999999999999999999999999999999888754
No 86
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.16 E-value=1.1e-09 Score=106.29 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=49.7
Q ss_pred CccchHHHHHHHHh-cCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
...+...|.+.+++ .|++++.+ .|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 174 r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 174 AAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 34677888888888 89999999 5999998666766678888877899999999999873
No 87
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.16 E-value=9.1e-11 Score=114.52 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=51.3
Q ss_pred CccchHHHHHHHHhc-CCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 271 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
...+.+.|.+.+++. |++++++ +|++|..++++.+++|++.+|+++.||.||.|+|.+.
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 447888899999988 9999999 9999998666777789898898899999999999873
No 88
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.16 E-value=4e-11 Score=110.93 Aligned_cols=40 Identities=30% Similarity=0.327 Sum_probs=36.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCce
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~ 95 (381)
.++||+|||||++|+++|++|+++|++|+|+|+....+|.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~ 44 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVS 44 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcC
Confidence 4689999999999999999999999999999998866553
No 89
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.15 E-value=1.1e-10 Score=106.53 Aligned_cols=74 Identities=12% Similarity=0.041 Sum_probs=50.1
Q ss_pred CCceEEecCCcCccchHHHHHHHHhc-CCEEEecceeeEEEEcCCCCEEEEEEeC-----CeEEEecEEEEccCHHHHhc
Q 016871 260 GSKMAFLDGNPPERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVDILKL 333 (381)
Q Consensus 260 g~~~~~~~~~~~~~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~V~t~~-----G~~i~ad~VI~A~~~~~~~~ 333 (381)
|....++.....-.....+.+.+.+. |+++++++.|++|..+ ++.+.+|++.+ ++++.+|.||+|+|......
T Consensus 196 g~~v~~v~~~~~~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 274 (338)
T 3itj_A 196 GSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATK 274 (338)
T ss_dssp SSEEEEECSSSSCCSCHHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCG
T ss_pred CCEEEEEEcCCccCCCHHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChh
Confidence 44444444332222256677777776 9999999999999984 44455576655 35799999999998653333
Q ss_pred c
Q 016871 334 Q 334 (381)
Q Consensus 334 L 334 (381)
+
T Consensus 275 ~ 275 (338)
T 3itj_A 275 I 275 (338)
T ss_dssp G
T ss_pred H
Confidence 3
No 90
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.15 E-value=1.5e-10 Score=107.63 Aligned_cols=53 Identities=26% Similarity=0.376 Sum_probs=45.0
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.|.+.+.+.|++|+++++|++|+. ++ .|++.+|+++.||.||.|+|.+
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCcc
Confidence 35667788888888999999999999986 34 3778888889999999999876
No 91
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.15 E-value=8.2e-11 Score=113.11 Aligned_cols=56 Identities=21% Similarity=0.251 Sum_probs=47.4
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++.|++|+++++|++|+.++++ + .|++.+|+++.+|.||+|+|..
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENC-Y-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSS-E-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCE-E-EEEECCCcEEEcCEEEEeeCCC
Confidence 456778888899999999999999999985444 3 5888889889999999999865
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.12 E-value=5.2e-10 Score=108.98 Aligned_cols=42 Identities=26% Similarity=0.478 Sum_probs=38.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
+..+||+|||||++|+++|..|++.|.+|+|+|+++.+||.+
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW 55 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 456899999999999999999999999999999999988865
No 93
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.12 E-value=2.4e-10 Score=110.03 Aligned_cols=40 Identities=33% Similarity=0.404 Sum_probs=36.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
...+||+|||||++|+++|..|++.|++|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 4578999999999999999999999999999999987764
No 94
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.11 E-value=3.6e-10 Score=106.42 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=49.4
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+..+.+.+.+.++++|++|++++.|++|.. +++.+.+|++.+|+++.||.||+|+|..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 346677788888899999999999999987 4556667999999899999999999854
No 95
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.10 E-value=1.5e-09 Score=106.61 Aligned_cols=58 Identities=19% Similarity=0.143 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHhcC-CEEEecceeeEEEEcCCCCEEEEEE---eCCe--EEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~~~~~V~t---~~G~--~i~ad~VI~A~~~~~ 330 (381)
..+...|.+.+.+.| ++|++++.|++|..+ ++.+++|.. .+|+ ++.|+.||+|+|.+.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 367788888888888 999999999999984 555656653 5675 689999999999763
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.10 E-value=5.7e-10 Score=106.68 Aligned_cols=56 Identities=23% Similarity=0.208 Sum_probs=44.1
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEE--eCCeEEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t--~~G~~i~ad~VI~A~~~~~ 330 (381)
..+...|.+.+++.|++++++++| +|..+ ++.+.+|.. .+| ++.||.||+|+|.+.
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 467788888887789999999999 99874 555556654 344 688999999999773
No 97
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.09 E-value=7.4e-10 Score=100.08 Aligned_cols=40 Identities=35% Similarity=0.443 Sum_probs=36.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHC--CCceEEEeccccCCce
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGK 95 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~~~gg~ 95 (381)
..+||+|||||++|+++|+.|+++ |++|+|+|++..+||.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg 119 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG 119 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc
Confidence 468999999999999999999997 9999999999887764
No 98
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.09 E-value=3.6e-10 Score=110.22 Aligned_cols=61 Identities=8% Similarity=0.024 Sum_probs=48.7
Q ss_pred cchHHHHHHHHh-cCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccC
Q 016871 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 335 (381)
Q Consensus 273 ~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll 335 (381)
.+...|.+.+++ .|++| +++.|++|.. +++.+++|.+.+|.++.||.||+|+|.+.....+
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEE
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCccCccc
Confidence 456678888887 58999 6789999987 4566778999999889999999999987544433
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.09 E-value=5.5e-10 Score=96.47 Aligned_cols=59 Identities=12% Similarity=0.013 Sum_probs=46.2
Q ss_pred cchHHHHHHHHhc-CCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhc
Q 016871 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL 333 (381)
Q Consensus 273 ~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~ 333 (381)
.+...|.+.+++. |++++ +++|++|..+ ++.+++|.+.+|+++.||.||+|+|.+....
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 4455677788886 89998 6799999874 4555678888887899999999999874433
No 100
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.09 E-value=4.2e-10 Score=103.85 Aligned_cols=53 Identities=26% Similarity=0.271 Sum_probs=41.9
Q ss_pred HHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 276 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 276 ~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.+.+.+.|+++++++.|++|..++++. +.|++.+|+++.+|+||+|+|..
T Consensus 78 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 78 ESLWAQAERYNPDVVLNETVTKYTKLDDGT-FETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHTTCCEEECSCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHhCCEEEcCCEEEEEEECCCce-EEEEECCCcEEEeeEEEEccCCC
Confidence 335556666789999999999999854433 35888888889999999999984
No 101
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.09 E-value=1.1e-09 Score=102.39 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=47.0
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEE-eCCe--EEEecEEEEccCHHH-HhccCC
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPVDI-LKLQLP 336 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t-~~G~--~i~ad~VI~A~~~~~-~~~Ll~ 336 (381)
.+...|.+.+.+.|++|+++++|++|..++++.+ .|++ .+|+ +++||.||.|.|.+. +.+.++
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4556678888788999999999999987433322 3665 6886 699999999999773 344554
No 102
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.08 E-value=5.3e-10 Score=102.00 Aligned_cols=41 Identities=27% Similarity=0.407 Sum_probs=37.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|+.|++.|++|+|+|+++..||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 35799999999999999999999999999999998877644
No 103
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.08 E-value=3.5e-10 Score=109.91 Aligned_cols=60 Identities=13% Similarity=-0.010 Sum_probs=48.3
Q ss_pred cchHHHHHHHHh-cCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhcc
Q 016871 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 334 (381)
Q Consensus 273 ~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~L 334 (381)
.+...|.+.+++ .|++| +++.|++|.. +++.+.+|.+.+|+++.||.||+|+|.+.....
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~ 184 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVI 184 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTCEE
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccCce
Confidence 456677888877 48999 6889999988 456677899999989999999999998744433
No 104
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.08 E-value=8.3e-10 Score=99.42 Aligned_cols=37 Identities=27% Similarity=0.366 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+||+|||||++|++||.+|++.|++|+|+|+...
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~ 40 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN 40 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3578999999999999999999999999999998643
No 105
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.08 E-value=8.9e-10 Score=104.96 Aligned_cols=63 Identities=22% Similarity=0.203 Sum_probs=47.5
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe---CCe--EEEecEEEEccCHHH-HhccCC
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI-LKLQLP 336 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~---~G~--~i~ad~VI~A~~~~~-~~~Ll~ 336 (381)
.+.+.|.+.+.+.|++|++++.|++|..+ ++.+++|++. +|+ +++||.||.|+|.+. +.+.++
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 45667888888889999999999999984 4455455554 675 799999999999773 333443
No 106
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.07 E-value=6.7e-10 Score=107.94 Aligned_cols=41 Identities=37% Similarity=0.550 Sum_probs=38.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw 48 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTW 48 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 46899999999999999999999999999999999988864
No 107
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.07 E-value=5.4e-10 Score=101.21 Aligned_cols=50 Identities=22% Similarity=0.195 Sum_probs=38.9
Q ss_pred HHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 277 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
.+.+.+++.|+++++ +.|++|..+++. +.|.+.+|+++.+|+||+|+|..
T Consensus 75 ~~~~~~~~~~v~~~~-~~v~~i~~~~~~--~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 75 VFNKHIEKYEVPVLL-DIVEKIENRGDE--FVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHTTTCCEEE-SCEEEEEEC--C--EEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEecCCE--EEEEECCCCEEEcCEEEECcCCC
Confidence 355556667889998 999999985444 34888887899999999999977
No 108
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.06 E-value=6.3e-10 Score=102.92 Aligned_cols=53 Identities=15% Similarity=-0.036 Sum_probs=42.0
Q ss_pred hHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 275 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 275 ~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
...+.+.+++.|++++++++|++|..+++++ .|.+.+| ++.+|+||+|+|.+.
T Consensus 91 ~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~--~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 91 AEYLQVVANHYELNIFENTVVTNISADDAYY--TIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEECSSSE--EEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHcCCeEEeCCEEEEEEECCCeE--EEEeCCC-EEEeCEEEECCCCCC
Confidence 3445666677899999999999999854443 4778777 799999999999874
No 109
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.06 E-value=2.4e-10 Score=110.09 Aligned_cols=42 Identities=26% Similarity=0.412 Sum_probs=37.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 97 (381)
..+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 468999999999999999999999999999999999998653
No 110
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.06 E-value=1.3e-09 Score=97.93 Aligned_cols=41 Identities=34% Similarity=0.430 Sum_probs=37.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHC--CCceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|+.|++. |++|+|+|+++.+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 457999999999999999999998 99999999999887643
No 111
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.05 E-value=3e-10 Score=108.54 Aligned_cols=57 Identities=14% Similarity=0.186 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEE-EeCCeEEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~-t~~G~~i~ad~VI~A~~~~~ 330 (381)
..+.+.+.+.++++|++|+++++|++|..++++. +.|+ +.+|+ +.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCccc
Confidence 4567888888999999999999999999854554 3588 88896 99999999998753
No 112
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.05 E-value=5.7e-10 Score=101.52 Aligned_cols=40 Identities=30% Similarity=0.401 Sum_probs=37.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
.+||+|||||++|+++|..|++.|++|+|+|+++.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4799999999999999999999999999999999888754
No 113
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.05 E-value=9e-10 Score=103.32 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=49.4
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+..+.+.+.+.++++|+++++++.|++|..+ ++.+.+|++.+|+++.||.||+|+|..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 3466777888889999999999999999873 455667999999899999999999864
No 114
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.04 E-value=1.1e-11 Score=114.18 Aligned_cols=52 Identities=15% Similarity=0.012 Sum_probs=42.9
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccCCC
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE 337 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll~~ 337 (381)
+.+++.+|.+.++++|++|+. ++|++|+..+ .++||.||+|+|+| ...|++.
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-------------~~~a~~VV~A~G~~-s~~l~~~ 192 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-------------REGADVIVNCTGVW-AGALQRD 192 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-------------HTTCSEEEECCGGG-GGGTSCC
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-------------cCCCCEEEECCCcC-hHhhcCC
Confidence 678999999999999999998 9999886421 26799999999999 5666653
No 115
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.04 E-value=1.5e-09 Score=101.98 Aligned_cols=37 Identities=43% Similarity=0.641 Sum_probs=34.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCc-eEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~-v~~~e~~~~~g 93 (381)
.+||+|||||++||++|..|++.|.+ |+|+|+++..+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 57999999999999999999999999 99999987654
No 116
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.01 E-value=4.5e-10 Score=105.21 Aligned_cols=40 Identities=28% Similarity=0.318 Sum_probs=35.9
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
...+||+|||||++|+++|..|++.|.+|+|+|+++..+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA 63 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccc
Confidence 3468999999999999999999999999999999876554
No 117
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.00 E-value=3e-09 Score=105.46 Aligned_cols=58 Identities=16% Similarity=0.115 Sum_probs=46.1
Q ss_pred ccchHHHHHHHHhc-CC-EEEecceeeEEEEcCC--CCEEEEEE---eCCe--EEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~-G~-~i~~~t~V~~I~~~~~--~~~~~V~t---~~G~--~i~ad~VI~A~~~~ 329 (381)
..+...|.+.+++. |+ +|++++.|++|..+++ +.+++|.. .+|+ ++.|+.||+|||.+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 35677788888887 99 9999999999998544 27777764 4564 58999999999877
No 118
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.99 E-value=1.7e-09 Score=101.42 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=36.6
Q ss_pred CCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 286 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 286 G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+|++++.|++++..+++.+ .|++.+|++++||.||-|-|.+
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~ 165 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSN 165 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTT
T ss_pred cceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCC
Confidence 457999999999998666654 5889999999999999999876
No 119
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.98 E-value=1.8e-09 Score=103.52 Aligned_cols=56 Identities=14% Similarity=0.172 Sum_probs=44.4
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCC---eEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G---~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++.|++++++++|++|+.++++. .|+..++ +++.+|.||+|+|..
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~--~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQV--TVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCE--EEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEE--EEEEEeCCCcEEEECCEEEEeeCCc
Confidence 4567778888899999999999999999854443 3555544 579999999999865
No 120
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.98 E-value=6.3e-10 Score=106.99 Aligned_cols=57 Identities=25% Similarity=0.332 Sum_probs=47.5
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.++++|++|+++++|++|..++++. +.|++.+|+++.+|.||+|+|..
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCC
Confidence 3567778888999999999999999998754443 35888888889999999999865
No 121
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.98 E-value=2.4e-09 Score=96.63 Aligned_cols=42 Identities=38% Similarity=0.612 Sum_probs=37.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEE-EeccccCCceeee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARDVLGGKIAA 98 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~-~e~~~~~gg~~~~ 98 (381)
..+||+|||||++|++||..|++.|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 457999999999999999999999999999 999 667886543
No 122
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.97 E-value=3.3e-09 Score=104.97 Aligned_cols=58 Identities=12% Similarity=0.126 Sum_probs=47.0
Q ss_pred ccchHHHHHHHHhc--CCEEEecceeeEEEEcCC--CCEEEEEE---eCCe--EEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~--G~~i~~~t~V~~I~~~~~--~~~~~V~t---~~G~--~i~ad~VI~A~~~~ 329 (381)
..+...|.+.+++. |++|+.++.|+++..+++ +++++|.. .+|+ +|.|+.||+|||.+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~ 232 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGA 232 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcc
Confidence 46778888888887 999999999999998544 47777765 3453 58999999999876
No 123
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.97 E-value=1.6e-09 Score=103.22 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=48.4
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhccC
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 335 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~Ll 335 (381)
...+.+.+.+.+++.|++|+++++|++|+.. ++.+ .|.+.+| ++.+|.||+|+|......++
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCBCCCSSC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCCCChHHH
Confidence 3456677888888999999999999999874 3444 6888777 89999999999865333333
No 124
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.97 E-value=4.2e-09 Score=87.04 Aligned_cols=52 Identities=21% Similarity=0.215 Sum_probs=42.2
Q ss_pred chHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 274 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 274 l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.+.+.+++.|++++++ +|++|+.++++ +.|++.+| ++.+|.||+|+|..
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEECCC-EEEECEEEECCCCC
Confidence 3444677778889999999 99999985444 35888888 89999999999876
No 125
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.97 E-value=1.6e-09 Score=106.62 Aligned_cols=54 Identities=24% Similarity=0.329 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++.|++++++++|++|+.+++ .|++.+|+++.+|.||+|+|..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~----~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENGA----VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT----EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCCC----EEEECCCCEEEcCEEEEccCCC
Confidence 45677788889999999999999999986322 2677888899999999999854
No 126
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.95 E-value=1.5e-09 Score=103.74 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=35.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCC-----CceEEEeccccCC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAG-----HKPLLLEARDVLG 93 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g-----~~v~~~e~~~~~g 93 (381)
..+||+|||||++|+++|..|++.| .+|+|+|+++..|
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4579999999999999999999999 9999999998876
No 127
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.95 E-value=1.5e-09 Score=104.08 Aligned_cols=58 Identities=19% Similarity=0.216 Sum_probs=47.0
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCC-eEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G-~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++.|++++++++|++|..++++..+.|++.+| +++.+|.||+|+|..
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 3566778888889999999999999998754553345888888 789999999999854
No 128
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.95 E-value=5.2e-09 Score=102.06 Aligned_cols=62 Identities=24% Similarity=0.235 Sum_probs=46.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCCcc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~~~ 133 (381)
..+||+|||||++||++|..|++.|.+|+|+|+++..+..... . ...+...++++++|+...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~------------~----~l~~~~~~~l~~lGl~~~ 86 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV------------G----TIGPRSMELFRRWGVAKQ 86 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCC------------C----EECHHHHHHHHHTTCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCce------------e----eeCHHHHHHHHHcCChHH
Confidence 3579999999999999999999999999999998765432211 0 013456677888887543
No 129
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.94 E-value=7.1e-10 Score=106.70 Aligned_cols=51 Identities=20% Similarity=0.292 Sum_probs=41.8
Q ss_pred HHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 277 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
++.+.++++|++|++++.|++|..+ + .+..|.+.+|+++.+|.||+|+|..
T Consensus 262 gle~~l~~~GV~v~~~~~v~~i~~~-~-~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 262 EVIQELERWGIDYVHIPNVKRVEGN-E-KVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHHHHHHTCEEEECSSEEEEECS-S-SCCEEEETTCCEEECSEEEECCCEE
T ss_pred HHHHHHHhCCcEEEeCCeeEEEecC-C-ceEEEEeCCCeEEEeCEEEECCCcC
Confidence 3447788899999999999999853 3 3445778888899999999999866
No 130
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.93 E-value=1.3e-08 Score=97.20 Aligned_cols=55 Identities=20% Similarity=0.318 Sum_probs=45.9
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCe-EEEecEEEEccCHH
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVD 329 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~-~i~ad~VI~A~~~~ 329 (381)
.+.+.+.+.+++.|++++++++|++|+.++++ +.|++.+|+ ++.+|.||+|+|..
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCC
Confidence 55677888888999999999999999874444 458888998 79999999999854
No 131
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.93 E-value=3.6e-09 Score=100.60 Aligned_cols=42 Identities=38% Similarity=0.427 Sum_probs=38.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccccCCceee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIA 97 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~~~gg~~~ 97 (381)
..+||+|||||++|+++|..|++.|. +|+|+|+++.+||...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 46799999999999999999999999 9999999988888653
No 132
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.93 E-value=7e-09 Score=98.80 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
..+.+.+.+.++++|++++++++|++|+.++++ +.+++.+|+++.+|.||+|+|...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~--v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCCeEEEcCEEEECcCCCc
Confidence 456777888888899999999999999874333 347777788899999999998763
No 133
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.93 E-value=7.4e-09 Score=102.76 Aligned_cols=64 Identities=13% Similarity=0.148 Sum_probs=46.7
Q ss_pred cchHHHHHHHHhcCC--EEEecceeeEEEEcCC--CCEEEEEEe------CC--eEEEecEEEEccCHH-HHhccCC
Q 016871 273 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDD--GTVKNFLLT------NG--NVIDGDAYVFATPVD-ILKLQLP 336 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~--~~~~~V~t~------~G--~~i~ad~VI~A~~~~-~~~~Ll~ 336 (381)
.+...|.+.+++.|+ +|+++++|++|+.+++ +..+.|++. +| ++++||.||.|.|.+ .+.+++.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 556668888888887 9999999999998543 222335543 46 479999999999977 3445554
No 134
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.92 E-value=6.2e-09 Score=94.52 Aligned_cols=40 Identities=43% Similarity=0.622 Sum_probs=35.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|..|++.|++|+|+|++ .+||.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 4579999999999999999999999999999998 566644
No 135
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.92 E-value=1.1e-08 Score=97.23 Aligned_cols=56 Identities=20% Similarity=0.296 Sum_probs=46.5
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
.+.+.+.+.+++.|++++++++|++|+.++++. +.|++.+|+++.+|.||+|+|..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCC
Confidence 566778888889999999999999998754443 35788888889999999999754
No 136
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.91 E-value=5.5e-09 Score=101.91 Aligned_cols=57 Identities=12% Similarity=0.179 Sum_probs=45.4
Q ss_pred cchHHHHHHHHhc-CCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHH
Q 016871 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 331 (381)
Q Consensus 273 ~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~ 331 (381)
.+...+.+.+++. |++|+ +..|+.|.. +++.+.+|.+.+|+++.||.||+|+|.+..
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 4566677777774 89994 669999987 455566788989989999999999998743
No 137
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.91 E-value=1.5e-08 Score=97.63 Aligned_cols=57 Identities=12% Similarity=0.131 Sum_probs=46.9
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeE-EEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~-i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.++++|+++++++.|++|+.++++. +.|++.+|++ +.+|.||+|+|..
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCC
Confidence 3566778888999999999999999998754443 3577888877 9999999999855
No 138
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.91 E-value=5.6e-09 Score=100.69 Aligned_cols=61 Identities=16% Similarity=0.191 Sum_probs=49.0
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHHhcc
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 334 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~~~L 334 (381)
..+.+.+.+.++++|++|+++++|++|+.++++ + .|++.+|+++.+|.||+|+|......+
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAG-V-LVTMTDGRTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSS-E-EEEETTSCEEEESEEEECCCEEECCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-E-EEEECCCcEEEcCEEEECCCCCcCCCc
Confidence 356778888899999999999999999975444 3 477778888999999999997744434
No 139
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.90 E-value=5.7e-09 Score=99.90 Aligned_cols=56 Identities=20% Similarity=0.304 Sum_probs=46.5
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++.|++++++++|++|+.+ ++.+ .|.+.+|+++.+|.||+|+|..
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKV-ARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBE-EEEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeE-EEEEeCCCEEEcCEEEECCCCC
Confidence 456777888889999999999999999873 4444 3778888899999999999865
No 140
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.90 E-value=4.7e-09 Score=94.62 Aligned_cols=38 Identities=37% Similarity=0.643 Sum_probs=33.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccccCCcee
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~~~gg~~ 96 (381)
+||+|||||++|+++|..|++.|+ +|+|+|++ .+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~ 40 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQI 40 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccc
Confidence 699999999999999999999999 99999995 455543
No 141
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.89 E-value=1.2e-08 Score=97.81 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=45.6
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeC-------CeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-------GNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~-------G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++.|+++++++.|++|+.++++..+.|.+.+ |+++.+|.||+|+|..
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 456677888889999999999999999975555334466654 2579999999999854
No 142
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.88 E-value=2e-09 Score=103.56 Aligned_cols=57 Identities=25% Similarity=0.359 Sum_probs=47.2
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.++++|++|++++.|++|..++++. +.|++.+|+++.+|.||+|+|..
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCc
Confidence 3567778888999999999999999998754443 35888888889999999999855
No 143
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.87 E-value=1e-08 Score=91.62 Aligned_cols=34 Identities=38% Similarity=0.535 Sum_probs=32.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+||+|||||++|+++|..|++.|++|+|+|+++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3799999999999999999999999999999865
No 144
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.86 E-value=5.4e-09 Score=98.17 Aligned_cols=56 Identities=14% Similarity=0.233 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.++++|+++++++.|++|..+ + .+..|++.+|+++.||.||+|+|..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~-~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE-G-QLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS-S-SCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc-C-cEEEEEECCCCEEEcCEEEEeeCCe
Confidence 355677788888899999999999999863 3 3456889999899999999999865
No 145
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.85 E-value=2.6e-08 Score=89.80 Aligned_cols=36 Identities=33% Similarity=0.438 Sum_probs=33.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+||+|||||++|++||..|++.|++|+|+|+...
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 358999999999999999999999999999999754
No 146
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.85 E-value=7.8e-09 Score=94.14 Aligned_cols=50 Identities=14% Similarity=0.224 Sum_probs=38.3
Q ss_pred HHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 276 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 276 ~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.|+++++++ |++|..+++++ .|++ +|+++.+|+||+|+|.+
T Consensus 74 ~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~--~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 74 DKFRKQSERFGTTIFTET-VTKVDFSSKPF--KLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHTTCEEECCC-CCEEECSSSSE--EEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHCCCEEEEeE-EEEEEEcCCEE--EEEE-CCcEEEcCEEEECCCCC
Confidence 335555667789999987 99998744432 3666 77789999999999986
No 147
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.85 E-value=1e-08 Score=92.68 Aligned_cols=62 Identities=10% Similarity=0.059 Sum_probs=45.8
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeC----C--eEEEecEEEEccCHHHHhccC
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYVFATPVDILKLQL 335 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~----G--~~i~ad~VI~A~~~~~~~~Ll 335 (381)
.+.+.+.+.+++.|++++++++|++|..+ ++.+.+|++.+ | +++.+|.||+|+|......++
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIF 252 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGG
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHh
Confidence 45566777778889999999999999874 43455566654 4 479999999999865333343
No 148
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.84 E-value=5.6e-09 Score=100.29 Aligned_cols=57 Identities=14% Similarity=0.098 Sum_probs=44.9
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCe-----EEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~-----~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.++++|++|++++.|++|..++++.+ .|++.+++ ++.+|.||+|+|..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccc
Confidence 45667788888999999999999999997555543 36665543 78999999999854
No 149
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.84 E-value=1e-08 Score=97.81 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=37.7
Q ss_pred CeEEEEcCChhHHHHHHHHHH---CCCc---eEEEeccccCCceeee
Q 016871 58 LKVVIAGAGLAGLSTAKYLAD---AGHK---PLLLEARDVLGGKIAA 98 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~---~g~~---v~~~e~~~~~gg~~~~ 98 (381)
+||+|||||++|++||..|++ .|.+ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999887643
No 150
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.84 E-value=1.2e-08 Score=91.93 Aligned_cols=52 Identities=15% Similarity=0.209 Sum_probs=39.9
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCC-CCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~-~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.+++.|++++++++|++|..+.+ +..+.|.+.+|+++.+|+||+|+|.+
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 44455667899999999999986422 22345888888889999999999975
No 151
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.81 E-value=6.6e-08 Score=92.36 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=45.0
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~ 330 (381)
..+.+.+.+.++++|++++++++|++|..+ ++ .+.|.+. ++++.+|.||+|+|.+.
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCCc
Confidence 456778888899999999999999999873 33 3346666 44899999999998763
No 152
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.81 E-value=1.4e-08 Score=98.87 Aligned_cols=53 Identities=17% Similarity=0.114 Sum_probs=40.9
Q ss_pred HhcCCEEEecceeeEEEEcC---CCCEEEEEEe--CCe--EEEec-EEEEccCHHHHhccC
Q 016871 283 QSLGGEVRLNSRVQKIELND---DGTVKNFLLT--NGN--VIDGD-AYVFATPVDILKLQL 335 (381)
Q Consensus 283 ~~~G~~i~~~t~V~~I~~~~---~~~~~~V~t~--~G~--~i~ad-~VI~A~~~~~~~~Ll 335 (381)
.+.+++|++++.|++|..++ ++++++|+.. +|+ +++|+ .||+|+|+.-..+||
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL 298 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTIL 298 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHH
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHH
Confidence 34589999999999999853 5678899875 464 57887 599999877666654
No 153
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.81 E-value=2.1e-08 Score=97.10 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=40.5
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCC-CCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~-~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.+.+.|++++++++|++|..+.+ +..+.|++.+|+++.+|+||+|+|.+
T Consensus 273 l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 273 LKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 55556677899999999999985322 22345888888889999999999975
No 154
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.80 E-value=1.5e-08 Score=95.69 Aligned_cols=58 Identities=16% Similarity=0.195 Sum_probs=47.1
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEc-CCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~-~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++.|+++++++.|++|..+ +++.+..|++.+|+++.+|.||+|+|..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 355667788888899999999999999862 2445556888899889999999999854
No 155
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.79 E-value=3.5e-08 Score=89.95 Aligned_cols=39 Identities=36% Similarity=0.592 Sum_probs=34.3
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
...+||+|||||++|+++|..|++.|++|+|+|+. .+||
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg 50 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGG 50 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCC
Confidence 45689999999999999999999999999999975 4444
No 156
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.79 E-value=1.8e-08 Score=91.22 Aligned_cols=40 Identities=43% Similarity=0.658 Sum_probs=35.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|+.|++.|++|+|+|+. .+||.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 54 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLT 54 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccc
Confidence 4589999999999999999999999999999994 556543
No 157
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.77 E-value=4.4e-08 Score=91.95 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=43.4
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++.|+++++++.|++|+. ++ |++.+|+++.+|.||+|+|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~----v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE----IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE----EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce----EEECCCCEEeeeEEEECCCCC
Confidence 35677788888899999999999999964 22 677888899999999999754
No 158
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.76 E-value=4.5e-08 Score=93.60 Aligned_cols=41 Identities=37% Similarity=0.479 Sum_probs=38.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccc
Confidence 46899999999999999999999999999999998888865
No 159
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.75 E-value=3.1e-08 Score=94.99 Aligned_cols=40 Identities=38% Similarity=0.477 Sum_probs=37.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
.+||+|||||++|+++|..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 5799999999999999999999999999999988888765
No 160
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.75 E-value=6.1e-08 Score=92.99 Aligned_cols=41 Identities=37% Similarity=0.472 Sum_probs=37.6
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 35899999999999999999999999999999988888755
No 161
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.74 E-value=7.8e-08 Score=94.15 Aligned_cols=57 Identities=19% Similarity=0.355 Sum_probs=45.4
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEc------------------CCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN------------------DDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~------------------~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+...+.+.+++.|+++++++.|++|..+ .++. +.+.+.+|+++.+|.||+|+|..
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH-LSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE-EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCc-EEEEEcCCCEEEcCEEEECcCCc
Confidence 356667788888999999999999999873 2333 34667888899999999999854
No 162
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.74 E-value=1.1e-08 Score=99.70 Aligned_cols=52 Identities=15% Similarity=0.126 Sum_probs=39.9
Q ss_pred hcCCEEEecceeeEEEEcC-CCCEEEEEEeC--Ce--EEEe-cEEEEccCHHHHhccC
Q 016871 284 SLGGEVRLNSRVQKIELND-DGTVKNFLLTN--GN--VIDG-DAYVFATPVDILKLQL 335 (381)
Q Consensus 284 ~~G~~i~~~t~V~~I~~~~-~~~~~~V~t~~--G~--~i~a-d~VI~A~~~~~~~~Ll 335 (381)
+.|++|++++.|++|..++ ++++++|...+ |+ ++.| +.||+|+|+....+||
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL 275 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLL 275 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHH
Confidence 4589999999999999853 56778888753 54 5678 4699999987666654
No 163
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.74 E-value=7.5e-08 Score=91.99 Aligned_cols=41 Identities=34% Similarity=0.520 Sum_probs=37.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceee
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 97 (381)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 47999999999999999999999999999999988888653
No 164
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.73 E-value=4e-08 Score=91.35 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=36.5
Q ss_pred HHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 282 l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+++.|++++++++|++|+.+ ++ . |++.+|+++.+|++|+|||+.
T Consensus 72 ~~~~~i~~~~~~~V~~id~~-~~-~--v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 72 YEKNNIKVITSEFATSIDPN-NK-L--VTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHHTTCEEECSCCEEEEETT-TT-E--EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECC-CC-E--EEECCCCEEECCEEEEecCCC
Confidence 35568999999999999863 33 3 778899899999999999974
No 165
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.72 E-value=1.1e-07 Score=90.86 Aligned_cols=56 Identities=18% Similarity=0.184 Sum_probs=44.1
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe-C--Ce--EEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~-~--G~--~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++.|+++++++.|++|+.++++ +.|++. + |+ ++.+|.||+|+|..
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKKDG--LHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE--EEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCE--EEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 355667888888999999999999999874333 236655 6 76 79999999999855
No 166
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.72 E-value=7.4e-09 Score=104.21 Aligned_cols=90 Identities=20% Similarity=0.287 Sum_probs=64.6
Q ss_pred ccccccCCCCCceeeccCCCC---------CCCCcccchhhhhhhccC--CCCCCCCCCCCeEEEEcCChhHHHHHHHHH
Q 016871 9 VKTGTRKGFCPSKVVCVDYPR---------PDIDNTSNFLEAAYLSSS--FRTSPRPSKPLKVVIAGAGLAGLSTAKYLA 77 (381)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~iiG~G~~G~~~a~~l~ 77 (381)
|+.|.+.|..+.+.+|+.|+. +...|..++......... +.........+||+|||||++|++||+.|+
T Consensus 330 ~~~~~~~g~~~~~~~ci~Cn~C~~~~~~~~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~ 409 (729)
T 1o94_A 330 LPQKVEQGRYDDIRVCIGCNVCISRWEIGGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLM 409 (729)
T ss_dssp HHHHHHTTCGGGCCCCCCCCHHHHHHHHSSSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHcCCccccccccccchhcccccccCCceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHH
Confidence 899999999889999999873 112234433322111100 011122345689999999999999999999
Q ss_pred HCCCceEEEeccccCCceeee
Q 016871 78 DAGHKPLLLEARDVLGGKIAA 98 (381)
Q Consensus 78 ~~g~~v~~~e~~~~~gg~~~~ 98 (381)
++|++|+|+|+++.+||.+..
T Consensus 410 ~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 410 ESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp HTTCEEEEECSSSSTTTTHHH
T ss_pred HCCCeEEEEeCCCCcCCeeee
Confidence 999999999999999987654
No 167
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.71 E-value=5.3e-08 Score=94.16 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=47.2
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
...+.+.+.+.++++|+++++++.|++++..+++ +.|.+.+++++.+|.|++|+|-.
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~--~~v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDK--ILVEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEE
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEecCCe--EEEEEcCCCeEEEEEEEEccccc
Confidence 3467788999999999999999999999985443 34778888789999999999744
No 168
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.71 E-value=1.3e-08 Score=96.13 Aligned_cols=37 Identities=32% Similarity=0.469 Sum_probs=34.2
Q ss_pred CeEEEEcCChhHHHHHHHHHH--CCCceEEEeccccCCc
Q 016871 58 LKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGG 94 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~--~g~~v~~~e~~~~~gg 94 (381)
.||+|||||++|+++|+.|++ .|++|+|+|+++..++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~ 41 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF 41 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc
Confidence 699999999999999999999 7899999999987654
No 169
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.70 E-value=1e-07 Score=91.03 Aligned_cols=41 Identities=37% Similarity=0.451 Sum_probs=38.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceee
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 97 (381)
.+||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 58999999999999999999999999999999898888764
No 170
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.70 E-value=2.1e-08 Score=94.86 Aligned_cols=53 Identities=17% Similarity=0.245 Sum_probs=45.2
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
...+.+.+.+.++++|+++++++.|++++. + .|++.+|+++.+|.||+|+|..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~----~v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAING--N----EITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEET--T----EEEETTSCEEECSEEEECCCEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecC--C----eeeecCCeEEeeeeEEEEecee
Confidence 457888899999999999999999999863 2 2778899899999999999854
No 171
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.68 E-value=3.1e-07 Score=88.86 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+||+|||||++|++||..|++.|.+|+|+|+++
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 46899999999999999999999999999999965
No 172
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.68 E-value=3.7e-08 Score=95.59 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=38.4
Q ss_pred cCCEEEecceeeEEEEcCCCCEEEEEEeC-C--eEEEecEEEEccCHHHHhccC
Q 016871 285 LGGEVRLNSRVQKIELNDDGTVKNFLLTN-G--NVIDGDAYVFATPVDILKLQL 335 (381)
Q Consensus 285 ~G~~i~~~t~V~~I~~~~~~~~~~V~t~~-G--~~i~ad~VI~A~~~~~~~~Ll 335 (381)
.+++|.+++.|++|.. +++++++|.... + .++.|+.||+|+|+--..+||
T Consensus 224 ~nl~v~~~~~v~~i~~-~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LL 276 (526)
T 3t37_A 224 KNLTILTGSRVRRLKL-EGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALL 276 (526)
T ss_dssp TTEEEECSCEEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCeEEEeCCEEEEEEe-cCCeEEEEEEEecCceEEEeecceEEcccccCCcchh
Confidence 4789999999999998 455666666543 2 257899999999987677665
No 173
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.67 E-value=4.4e-08 Score=95.29 Aligned_cols=36 Identities=33% Similarity=0.335 Sum_probs=33.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHH-CCCceEEEeccccC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~-~g~~v~~~e~~~~~ 92 (381)
.+|+||||||.+|+.+|.+|++ .+.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 68999999998654
No 174
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.67 E-value=1.6e-07 Score=93.41 Aligned_cols=61 Identities=26% Similarity=0.324 Sum_probs=45.4
Q ss_pred CCeEEEEcCChhHHHHHHHHHH-----CCCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHHHHHHhCCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLAD-----AGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIN 131 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~-----~g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~~gl~ 131 (381)
.+||+|||||++||++|..|++ .|.+|+|+|+++...... + +. ...+...++++++|+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~g-r------------a~---~l~~~tle~l~~lGl~ 71 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNG-Q------------AD---GLQCRTLESLKNLGLA 71 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSC-S------------CC---EECHHHHHHHHTTTCH
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCC-c------------ee---EEChHHHHHHHHCCCH
Confidence 5799999999999999999999 999999999976432110 0 00 1134567888888875
Q ss_pred cc
Q 016871 132 DR 133 (381)
Q Consensus 132 ~~ 133 (381)
..
T Consensus 72 ~~ 73 (665)
T 1pn0_A 72 DK 73 (665)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 175
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.66 E-value=1.8e-07 Score=90.16 Aligned_cols=63 Identities=14% Similarity=0.057 Sum_probs=47.6
Q ss_pred cchHHHHHHHHhcC-CEEEecceeeEEEEcCCC-CEEEEEEe--CC-----eEEEecEEEEccCHHHHhccC
Q 016871 273 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQL 335 (381)
Q Consensus 273 ~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~-~~~~V~t~--~G-----~~i~ad~VI~A~~~~~~~~Ll 335 (381)
....++++.++++| ++|++++.|++|..++++ ++++|++. +| .++.|+.||+|+|+....+||
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL 293 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELL 293 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHH
Confidence 33455666666675 999999999999986534 68888875 56 368999999999988555543
No 176
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.66 E-value=1.7e-07 Score=90.14 Aligned_cols=56 Identities=25% Similarity=0.294 Sum_probs=46.3
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.++++|+++++++.|++|..+ ++. +.|++.+|+++.||.||+|+|..
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~-~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGK-LLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCe-EEEEECCCCEEECCEEEECCCCC
Confidence 456677888888999999999999999863 333 35888899899999999999855
No 177
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=1.6e-07 Score=89.39 Aligned_cols=39 Identities=31% Similarity=0.434 Sum_probs=35.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
.+||+|||||++|+++|..|++.|++|+|+|++ ..||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 479999999999999999999999999999997 677755
No 178
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.66 E-value=5.4e-07 Score=86.49 Aligned_cols=33 Identities=27% Similarity=0.465 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEec
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~ 88 (381)
.++||+|||||++|++||..|++.|.+|+|+|+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk 37 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADY 37 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 568999999999999999999999999999998
No 179
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.65 E-value=2.1e-08 Score=100.13 Aligned_cols=87 Identities=21% Similarity=0.277 Sum_probs=63.9
Q ss_pred cccccccCCCCCceeeccCCCCCCCC---------cccchhhhhhhccCCCCCCCCCCCCeEEEEcCChhHHHHHHHHHH
Q 016871 8 RVKTGTRKGFCPSKVVCVDYPRPDID---------NTSNFLEAAYLSSSFRTSPRPSKPLKVVIAGAGLAGLSTAKYLAD 78 (381)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~v~iiG~G~~G~~~a~~l~~ 78 (381)
.|+.+.+.|..+.+.+|+.|+..|.. |..+.....+.. .+..+....+||+|||||++|++||..|++
T Consensus 318 ~l~~k~~~g~~~~~~~c~~c~~~C~~~~~~~~~~~C~~np~~~~e~~---~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~ 394 (671)
T 1ps9_A 318 ELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHETK---MPILPAVQKKNLAVVGAGPAGLAFAINAAA 394 (671)
T ss_dssp THHHHHHTTCGGGCCCCCCCCTTTHHHHHTTCCCCCSSCTTTTCTTT---SCCCSCSSCCEEEEECCSHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCcccccccccccchhccCCCceEEEeCcccccccc---cCCCCCCCCCeEEEECCCHHHHHHHHHHHh
Confidence 38899999999999999988775532 233222111110 011123456899999999999999999999
Q ss_pred CCCceEEEeccccCCceee
Q 016871 79 AGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 79 ~g~~v~~~e~~~~~gg~~~ 97 (381)
.|++|+|+|+++..||...
T Consensus 395 ~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 395 RGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp TTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEEeCCCCCCCeee
Confidence 9999999999999988754
No 180
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.64 E-value=6.1e-08 Score=93.21 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=43.7
Q ss_pred CccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCC----eEEEecEEEEccCH
Q 016871 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG----NVIDGDAYVFATPV 328 (381)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G----~~i~ad~VI~A~~~ 328 (381)
+..+.+.+.+.|+++|++|++++.|++|+ +++....+.+.+| ++|.||.||+|+|.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 45677788888999999999999999996 3444444555566 36999999999973
No 181
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.64 E-value=1.8e-07 Score=89.25 Aligned_cols=39 Identities=31% Similarity=0.437 Sum_probs=35.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
.+||+|||||++|+++|..|++.|++|+|+|++ ..||.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 479999999999999999999999999999997 566654
No 182
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.63 E-value=1.5e-08 Score=92.13 Aligned_cols=42 Identities=33% Similarity=0.396 Sum_probs=38.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHH--CCCceEEEeccccCCceee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~--~g~~v~~~e~~~~~gg~~~ 97 (381)
.++||+|||||++||+||++|++ .|++|+|+|+++.+||.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 56899999999999999999985 4999999999999999764
No 183
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.62 E-value=1.4e-07 Score=91.76 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=40.8
Q ss_pred hcCCEEEecceeeEEEEcCCCCEEEEEEeC---Ce--EEEec-EEEEccCHHHHhccC
Q 016871 284 SLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGD-AYVFATPVDILKLQL 335 (381)
Q Consensus 284 ~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~---G~--~i~ad-~VI~A~~~~~~~~Ll 335 (381)
+.|++|++++.|++|..++++++++|...+ |+ ++.|+ .||+|+|+....+||
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL 278 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLL 278 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhh
Confidence 468999999999999985437778888754 53 68898 999999986455554
No 184
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.60 E-value=3.1e-07 Score=85.38 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=40.5
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.+++.|++++++++|++|..++++ +.|++.+|+++.+|.||+|+|..
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGEG--LEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCCE--EEEEECCCCEEECCEEEECcCCC
Confidence 455566779999999999999874333 35788888889999999999855
No 185
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.59 E-value=4.2e-07 Score=87.57 Aligned_cols=63 Identities=17% Similarity=0.120 Sum_probs=47.3
Q ss_pred cchHHHHHHHHhcC-CEEEecceeeEEEEcCCC-CEEEEEEe--CC-----eEEEecEEEEccCHHHHhccC
Q 016871 273 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQL 335 (381)
Q Consensus 273 ~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~-~~~~V~t~--~G-----~~i~ad~VI~A~~~~~~~~Ll 335 (381)
....+++..++++| ++|++++.|++|..++++ ++++|... +| .++.|+.||+|+|+....+||
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 34455666666664 999999999999986544 67888875 45 268899999999988555543
No 186
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.53 E-value=6.3e-07 Score=86.91 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=42.9
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCC--CCEEEEEEe--CCe--EE---EecEEEEccCHHHHhccC
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDD--GTVKNFLLT--NGN--VI---DGDAYVFATPVDILKLQL 335 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~--~~~~~V~t~--~G~--~i---~ad~VI~A~~~~~~~~Ll 335 (381)
+...+++.|++|++++.|++|..+++ +++++|... +|+ ++ .++.||+|+|+....+||
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL 266 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLL 266 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHH
Confidence 44444567899999999999998543 478888875 464 34 568999999987666554
No 187
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.53 E-value=5.9e-08 Score=87.48 Aligned_cols=41 Identities=34% Similarity=0.613 Sum_probs=36.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 97 (381)
.++||+|||||++|++||..|++.|++|+|+|+. .+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 4699999999999999999999999999999985 5666653
No 188
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=5e-07 Score=83.35 Aligned_cols=35 Identities=31% Similarity=0.422 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...||+|||||++|++||..|++.| +|+|+|+++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 3569999999999999999999999 9999999764
No 189
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.49 E-value=1.6e-07 Score=88.72 Aligned_cols=33 Identities=33% Similarity=0.451 Sum_probs=29.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHCC--CceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g--~~v~~~e~~~ 90 (381)
.+|||||||++|++||..|++.+ ++|+|+|+++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 47999999999999999999865 7999999865
No 190
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.49 E-value=8.9e-07 Score=84.01 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=32.6
Q ss_pred CeEEEEcCChhHHHHHHHHHHC--CCceEEEeccccCC
Q 016871 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~~~g 93 (381)
+||+|||||++|++||..|++. |++|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 4899999999999999999998 89999999977543
No 191
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.49 E-value=6.9e-07 Score=85.97 Aligned_cols=40 Identities=25% Similarity=0.199 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
..-+||||||+|++||++|.+|.+.|...+++|+.+..++
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 3457999999999999999999998887777777666554
No 192
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.49 E-value=4.6e-07 Score=86.82 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=32.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHC--CCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~~~g 93 (381)
.+||+|||||++|+++|..|++. |.+|+|+|+++..+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 46999999999999999999986 89999999977543
No 193
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.49 E-value=4e-07 Score=86.57 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=32.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHC--CCceEEEeccccC
Q 016871 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~~~ 92 (381)
+||+|||||++|+++|..|++. |.+|+|+|+++.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999998 9999999997754
No 194
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.48 E-value=4.8e-08 Score=91.37 Aligned_cols=45 Identities=7% Similarity=0.046 Sum_probs=37.6
Q ss_pred HHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCH
Q 016871 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 328 (381)
Q Consensus 282 l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~ 328 (381)
+++.|+++++++.|+.++.+.+... |++.+|+++.+|.||+|+|.
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~~~--v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEAMT--VETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTTTE--EEETTSCEEECSEEEECCCE
T ss_pred HHhcCcEEEeCceEEEEEecccceE--EEcCCCcEEEeeEEEEecCc
Confidence 3456899999999999998555544 88999999999999999864
No 195
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.48 E-value=1.4e-06 Score=81.59 Aligned_cols=46 Identities=22% Similarity=0.262 Sum_probs=37.7
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.++++|+++++++.|++|+ + + .|++.+|+++.+|.||+|+|..
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~-~-~----~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV-D-G----VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE-T-T----EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHcCcEEEeCCEEEEEE-C-C----EEEECCCCEEEcCEEEECcCCC
Confidence 4455677899999999999998 3 2 3777888899999999999854
No 196
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.47 E-value=6.3e-07 Score=86.09 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCC---CceEEEeccccC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAG---HKPLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g---~~v~~~e~~~~~ 92 (381)
..+||+|||||++|+++|..|++.| .+|+|+|+++.+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 3589999999999999999999988 999999997654
No 197
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.46 E-value=3.3e-07 Score=86.69 Aligned_cols=34 Identities=38% Similarity=0.623 Sum_probs=31.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHH---CCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLAD---AGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~---~g~~v~~~e~~~ 90 (381)
..||+|||||++|+++|..|++ .|++|+|+|+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 4699999999999999999999 899999999866
No 198
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.43 E-value=1.1e-06 Score=83.38 Aligned_cols=50 Identities=20% Similarity=0.287 Sum_probs=38.9
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.++++|++++++++|++|+. +++.+..|.+ +|+++.+|.||+|+|..
T Consensus 197 l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 197 LAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred HHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 45556778999999999999986 3444444555 67789999999999855
No 199
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.40 E-value=1.5e-06 Score=82.45 Aligned_cols=49 Identities=22% Similarity=0.321 Sum_probs=37.7
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.+++.|+++++++.|++|..+ +.+..|.+ +|+++.+|.||+|+|..
T Consensus 197 l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 197 LTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp HHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCEE
T ss_pred HHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCCC
Confidence 555667789999999999999863 33334666 45589999999999865
No 200
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.38 E-value=2e-06 Score=82.53 Aligned_cols=49 Identities=16% Similarity=0.333 Sum_probs=37.7
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.+++.|++|++++.|++|.. + +.+..|.+ +|+++.+|.||+|+|..
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~-~-~~v~~v~~-~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG-N-GKVEKIIT-DKNEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC-S-SSCCEEEE-SSCEEECSEEEECCCEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc-C-CcEEEEEE-CCcEEECCEEEECCCCC
Confidence 45556778999999999999985 3 33334555 66789999999999854
No 201
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.31 E-value=5.7e-07 Score=85.36 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.5
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceee
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 97 (381)
...+||+|||||++|+++|+.|++.|++|+|+|+.+.+||...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 4578999999999999999999999999999999999998753
No 202
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.30 E-value=5.4e-06 Score=79.30 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=32.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46899999999999999999999999999998654
No 203
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.27 E-value=3.9e-06 Score=80.32 Aligned_cols=49 Identities=16% Similarity=0.131 Sum_probs=38.0
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
+.+.+++.|++++++++|++|..+ +.+..|.+.+ +++.+|.||+|+|..
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~-~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGN--ERVEAVETDK-GTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETT-EEEECSEEEECSCEE
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECC-CEEEcCEEEECcCCC
Confidence 455567789999999999999863 3344566654 489999999999865
No 204
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=7.6e-06 Score=77.73 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46999999999999999999999999999998543
No 205
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.21 E-value=6.6e-07 Score=85.59 Aligned_cols=41 Identities=29% Similarity=0.451 Sum_probs=38.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcc
Confidence 46899999999999999999999999999999998888865
No 206
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.20 E-value=1.3e-05 Score=76.66 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=32.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 46899999999999999999999999999998653
No 207
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.17 E-value=6.2e-06 Score=78.97 Aligned_cols=50 Identities=14% Similarity=0.102 Sum_probs=38.7
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeC----CeEEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~----G~~i~ad~VI~A~~~~ 329 (381)
+.+.++++|+++++++.|++|+.++++ +.|++.+ |+++.+|.||+|+|..
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEeccCCCceEEEcCEEEECcCCC
Confidence 445566779999999999999874333 3466666 6679999999999855
No 208
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.14 E-value=2e-05 Score=75.07 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=31.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 46899999999999999999999999999998543
No 209
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.13 E-value=2e-06 Score=79.78 Aligned_cols=35 Identities=34% Similarity=0.393 Sum_probs=32.9
Q ss_pred CeEEEEcCChhHHHHHHHHHHC--CCceEEEeccccC
Q 016871 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~~~ 92 (381)
+||+|||||++|+++|..|++. |++|+|+|+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998765
No 210
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.12 E-value=1.6e-06 Score=81.81 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+||+|||||++|+++|+.|++.|++|+|+|+++
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999976
No 211
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.12 E-value=2.3e-05 Score=74.66 Aligned_cols=50 Identities=14% Similarity=0.178 Sum_probs=37.2
Q ss_pred HHHHH-HhcCCEEEecceeeEEEEcCCCCEEEEEEe--CC--eEEEecEEEEccCHH
Q 016871 278 IVEHI-QSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l-~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~--~G--~~i~ad~VI~A~~~~ 329 (381)
+.+.+ +++|++++++++|++|+.++++. .|.+. +| +++.+|.||+|+|..
T Consensus 221 l~~~l~~~~gv~i~~~~~v~~i~~~~~~~--~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 221 LVGALAKNEKMKFMTSTKVVGGTNNGDSV--SLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHTCCEEECSCEEEEEEECSSSE--EEEEECC---EEEEEESEEEECSCEE
T ss_pred HHHHHhhcCCcEEEeCCEEEEEEEcCCeE--EEEEEcCCCceEEEECCEEEECCCcc
Confidence 55556 67899999999999998754442 35554 56 579999999999865
No 212
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.12 E-value=1.5e-06 Score=83.54 Aligned_cols=56 Identities=13% Similarity=-0.027 Sum_probs=43.1
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEe--CC--eEEEecEEEEccCHHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPVDI 330 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~--~G--~~i~ad~VI~A~~~~~ 330 (381)
..+.+.+.+.+++. +++++++.|++|+.++++.. +++. +| +++.+|.||+|+|...
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~--v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVE--VIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEE--EEEECTTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEE--EEEEeCCCceEEEECCEEEEeeCCcc
Confidence 45666777777777 99999999999998544432 5554 67 6799999999998653
No 213
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.11 E-value=1.9e-06 Score=84.89 Aligned_cols=41 Identities=29% Similarity=0.395 Sum_probs=37.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 35899999999999999999999999999999999888744
No 214
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.10 E-value=9.5e-06 Score=77.14 Aligned_cols=35 Identities=29% Similarity=0.484 Sum_probs=32.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 46899999999999999999999999999998653
No 215
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.07 E-value=1.6e-06 Score=82.57 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=37.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 97 (381)
..+||+|||||++|++||..|++.|++|+|+|+ +..||.+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 358999999999999999999999999999999 67887653
No 216
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=1.9e-05 Score=75.33 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=31.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+|+|||||.+|+.+|..|++.|.+|+++|+.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46899999999999999999999999999998643
No 217
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.01 E-value=4.5e-05 Score=73.14 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=33.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~ 92 (381)
..+|+|||||.+|+.+|..|++.|.+|+++|+.+.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 568999999999999999999999999999987654
No 218
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.99 E-value=5.7e-06 Score=75.41 Aligned_cols=37 Identities=35% Similarity=0.311 Sum_probs=33.6
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
+||+|||||++|+.||+.|++.|++|+|+|++...+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~t 38 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMT 38 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCC
Confidence 6999999999999999999999999999999875443
No 219
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.98 E-value=2.1e-05 Score=72.41 Aligned_cols=33 Identities=33% Similarity=0.460 Sum_probs=31.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+++|||||.+|+.+|..|++.|.+|+++|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 589999999999999999999999999999754
No 220
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.95 E-value=0.00012 Score=69.61 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHC--CCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~~ 91 (381)
...+|+|||||.+|+.+|..|++. |.+|+++++++.
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 456899999999999999999998 899999998664
No 221
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.92 E-value=1e-05 Score=61.91 Aligned_cols=57 Identities=11% Similarity=0.027 Sum_probs=49.5
Q ss_pred eEEEecEEEEccCHHHHhccCCCcccchHHHHHhccCCCCCEEEEEEEEecCCCCCC
Q 016871 315 NVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY 371 (381)
Q Consensus 315 ~~i~ad~VI~A~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~ 371 (381)
++++||+||+|+|..++..+.-.+.+|....++++++++.+..|+.+.|++|||+..
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~ 60 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFT 60 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCC
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCC
Confidence 379999999999999888765444578888899999999999999999999999654
No 222
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.92 E-value=6.7e-05 Score=71.05 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+++|||+|.+|+.+|..|++.|.+|+++|+.+
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 34689999999999999999999999999999754
No 223
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.90 E-value=7.3e-06 Score=84.90 Aligned_cols=41 Identities=34% Similarity=0.602 Sum_probs=38.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCceee
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 97 (381)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 47899999999999999999999999999999999998876
No 224
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.90 E-value=8.2e-06 Score=85.14 Aligned_cols=41 Identities=32% Similarity=0.500 Sum_probs=38.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|++||..|++.|+ +|+|+|+.+.+||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46799999999999999999999999 799999999999875
No 225
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.88 E-value=7.1e-06 Score=77.86 Aligned_cols=40 Identities=25% Similarity=0.274 Sum_probs=37.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHH-C------CCceEEEeccccCCcee
Q 016871 57 PLKVVIAGAGLAGLSTAKYLAD-A------GHKPLLLEARDVLGGKI 96 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~-~------g~~v~~~e~~~~~gg~~ 96 (381)
.+||+|||||++|++||..|++ . |++|+|+|+.+.+||.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~ 49 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV 49 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc
Confidence 5799999999999999999999 7 99999999998888876
No 226
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.85 E-value=1.2e-05 Score=76.16 Aligned_cols=54 Identities=19% Similarity=0.262 Sum_probs=41.2
Q ss_pred ccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
..+.+.+.+.+++. +++++++.|++|..+ ++ +..+ ..+|+++.+|.||+|+|..
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~-~~-v~~v-~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGE-ER-VEKV-VTDAGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECS-SS-CCEE-EETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEecc-Cc-EEEE-EeCCCEEECCEEEEeeCCc
Confidence 35566777888888 999999999999863 33 3234 4466689999999999854
No 227
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.83 E-value=1e-05 Score=79.60 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
...+||+|||||++|++||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 35689999999999999999999999999999973
No 228
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.83 E-value=1.4e-05 Score=75.94 Aligned_cols=41 Identities=24% Similarity=0.282 Sum_probs=37.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCC--CceEEEeccccCCcee
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKI 96 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g--~~v~~~e~~~~~gg~~ 96 (381)
..+||+|||||++|+++|..|++.| ++|+|+|+.+.+||..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee
Confidence 4579999999999999999999998 9999999999888865
No 229
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.81 E-value=0.00022 Score=68.23 Aligned_cols=51 Identities=16% Similarity=0.151 Sum_probs=37.4
Q ss_pred HHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeC---Ce--EEEecEEEEccCHH
Q 016871 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPVD 329 (381)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~---G~--~i~ad~VI~A~~~~ 329 (381)
+.+.++++|+++++++.|++|...+++.+ .|++.+ |+ ++.+|.||+|+|..
T Consensus 231 l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 231 VTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 44556677999999999999987544433 354443 54 47899999999854
No 230
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.77 E-value=1.7e-05 Score=77.08 Aligned_cols=59 Identities=10% Similarity=0.036 Sum_probs=44.6
Q ss_pred HHHHHHHHh-cCCEEEecceeeEEEEcCCCCEEEEEEeC---Ce--EE---EecEEEEccCHHHHhccC
Q 016871 276 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYVFATPVDILKLQL 335 (381)
Q Consensus 276 ~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~V~t~~---G~--~i---~ad~VI~A~~~~~~~~Ll 335 (381)
.++.+.+.+ .|++|++++.|++|..+ ++++++|++.+ |+ ++ .++.||+|+|++...+||
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL 266 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRIL 266 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHH
Confidence 346666655 48999999999999984 56777888865 63 34 789999999987655543
No 231
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.74 E-value=0.00023 Score=64.24 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=30.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 5689999999999999999999999999998743
No 232
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.74 E-value=2.3e-05 Score=73.23 Aligned_cols=38 Identities=29% Similarity=0.242 Sum_probs=34.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccccCC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLG 93 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~~~g 93 (381)
..+||+|||||++|+++|..|++.|+ +|+|+|+++..+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 46899999999999999999999998 599999987654
No 233
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.68 E-value=0.00021 Score=65.40 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=30.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999998753
No 234
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.62 E-value=0.00048 Score=66.37 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=29.2
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEec
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~ 88 (381)
.+++|||+|.+|+..|..|++.|.+|+++++
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~ 241 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVR 241 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEec
Confidence 4699999999999999999999999999986
No 235
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.61 E-value=4.1e-05 Score=70.95 Aligned_cols=34 Identities=32% Similarity=0.449 Sum_probs=31.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCC--CceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g--~~v~~~e~~~ 90 (381)
.+||+|||||++|++||..|++.| .+|+++|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 579999999999999999999998 4689999875
No 236
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.59 E-value=0.00078 Score=65.25 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=40.9
Q ss_pred HHHHHHHHhcCCEEEe--cceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHHHH
Q 016871 276 LPIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 331 (381)
Q Consensus 276 ~~l~~~l~~~G~~i~~--~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~~~ 331 (381)
..+.+.+.+.++++.. +++|++|+. + +|.|.+| ++.+|.||+|||....
T Consensus 342 ~~y~~al~~~nV~lv~~~~~~I~~it~--~----gv~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 342 TNYYETYNRDNVHLVDIREAPIQEVTP--E----GIKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp SSHHHHTTSTTEEEEETTTSCEEEEET--T----EEEESSC-EEECSEEEECCCCBSS
T ss_pred ccHHHHhcCCCEEEEecCCCCceEEcc--C----eEEeCCC-eeecCEEEECCccccc
Confidence 4477888888899987 899999974 3 3889999 9999999999998843
No 237
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.58 E-value=0.00031 Score=64.29 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=30.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 4589999999999999999999999999998754
No 238
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.56 E-value=0.00067 Score=66.63 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=29.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
.+|+|||||.+|+.+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999864
No 239
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.56 E-value=0.00068 Score=60.76 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=30.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
..+|+|||+|.+|+..|..|++.|.+|+++++.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~ 187 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYM 187 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcC
Confidence 468999999999999999999999999999864
No 240
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.53 E-value=0.00099 Score=64.46 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=33.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457999999999999999999999999999998765
No 241
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.48 E-value=0.0013 Score=58.68 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|+|||+|.+|+.+|..|++.|.+|+++++++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4789999999999999999999999999998643
No 242
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.46 E-value=0.0013 Score=58.54 Aligned_cols=34 Identities=29% Similarity=0.311 Sum_probs=30.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 4689999999999999999999999999998643
No 243
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.37 E-value=0.00068 Score=64.40 Aligned_cols=34 Identities=35% Similarity=0.525 Sum_probs=31.4
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+++|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD 205 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 4689999999999999999999999999998754
No 244
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.28 E-value=0.00017 Score=70.58 Aligned_cols=37 Identities=35% Similarity=0.457 Sum_probs=33.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHH-CCCceEEEeccccC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~-~g~~v~~~e~~~~~ 92 (381)
..+|++|||||.+|+.+|.+|++ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 56899999999999999999999 79999999997653
No 245
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.26 E-value=0.004 Score=58.93 Aligned_cols=45 Identities=13% Similarity=0.106 Sum_probs=33.9
Q ss_pred cCCEEEecceeeEEEEcCCC-CEEEEEEe---------------CC--eEEEecEEEEccCHH
Q 016871 285 LGGEVRLNSRVQKIELNDDG-TVKNFLLT---------------NG--NVIDGDAYVFATPVD 329 (381)
Q Consensus 285 ~G~~i~~~t~V~~I~~~~~~-~~~~V~t~---------------~G--~~i~ad~VI~A~~~~ 329 (381)
+|+++++++.+++|..++++ .+.+|++. +| +++.+|.||+|+|..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 78999999999999874334 55445443 34 479999999999865
No 246
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.19 E-value=0.001 Score=68.96 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
..+|+|||+|..|+.+|..|++.|.+|+|+|++
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~ 316 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDAR 316 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 358999999999999999999999999999874
No 247
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.18 E-value=0.0039 Score=55.59 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=30.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~ 186 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRR 186 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeC
Confidence 468999999999999999999999999999864
No 248
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.07 E-value=0.003 Score=56.58 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=30.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
..+++|||+|.+|+.+|..|++.|.+|+++++.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~ 186 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRR 186 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEec
Confidence 568999999999999999999999999999764
No 249
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.04 E-value=0.00022 Score=65.94 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=34.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 45899999999999999999999999999999887654
No 250
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.04 E-value=0.00059 Score=60.95 Aligned_cols=37 Identities=19% Similarity=0.375 Sum_probs=33.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+|+|||||.+|+.+|..|++.|.+|+|+|+++.+-
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 3589999999999999999999999999999987643
No 251
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.96 E-value=0.0023 Score=64.22 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=31.6
Q ss_pred CCCeEEEEc--CChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG--~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|+||| ||.+|+.+|..|++.|.+|+++++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 456899999 99999999999999999999998754
No 252
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.87 E-value=0.0016 Score=50.67 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
....+|+|+|.|..|...|..|.+.|++|+++|++..
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3456899999999999999999999999999998753
No 253
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.86 E-value=0.0015 Score=51.92 Aligned_cols=40 Identities=23% Similarity=0.398 Sum_probs=33.4
Q ss_pred CCCCCCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 52 PRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 52 ~~~~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
+.......|+|+|+|..|...|..|.+.|++|++++++..
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3444567899999999999999999999999999998653
No 254
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.84 E-value=0.0011 Score=61.73 Aligned_cols=39 Identities=31% Similarity=0.364 Sum_probs=34.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
...+|+|||+|.+|+.+|..|.+.|.+|+++|+.+.+..
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 356899999999999999999999999999999876543
No 255
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.83 E-value=0.00033 Score=62.57 Aligned_cols=36 Identities=28% Similarity=0.444 Sum_probs=32.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+++|||||.+|+.+|..|++.|.+|+|+|+...
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 356899999999999999999999999999997554
No 256
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.61 E-value=0.0023 Score=49.51 Aligned_cols=34 Identities=32% Similarity=0.600 Sum_probs=30.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999854
No 257
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.42 E-value=0.0029 Score=58.77 Aligned_cols=38 Identities=26% Similarity=0.279 Sum_probs=34.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
..+++|||+|.+|+.+|..|.+.|.+|+++|+.+....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~ 179 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA 179 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh
Confidence 46899999999999999999999999999999876543
No 258
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.38 E-value=0.0032 Score=58.75 Aligned_cols=38 Identities=32% Similarity=0.371 Sum_probs=34.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCCc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~gg 94 (381)
..+++|||+|.+|+.+|..|.+.|.+|+++|+.+.+..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh
Confidence 56899999999999999999999999999999877543
No 259
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.35 E-value=0.0039 Score=48.42 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.4
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999865
No 260
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.29 E-value=0.0041 Score=58.94 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=33.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 205 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc
Confidence 3689999999999999999999999999999987654
No 261
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.26 E-value=0.0019 Score=60.61 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=33.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+|+|||+|.+|+.+|..|.+.|.+|+++|+.+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 5689999999999999999999999999999987654
No 262
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.24 E-value=0.0058 Score=57.43 Aligned_cols=37 Identities=30% Similarity=0.477 Sum_probs=33.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||||.+|+.+|..+++.|.+|+++|+.+.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll 183 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN 183 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc
Confidence 4589999999999999999999999999999987654
No 263
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.19 E-value=0.0032 Score=61.22 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=33.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+|+|||+|.+|+.+|..|++.|.+|+++|+.+...
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 187 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM 187 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc
Confidence 4689999999999999999999999999999977543
No 264
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.19 E-value=0.0043 Score=58.58 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=33.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||+|.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 4689999999999999999999999999999987654
No 265
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.19 E-value=0.0051 Score=45.83 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=30.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCC-CceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g-~~v~~~e~~~ 90 (381)
..+|+|+|+|..|...+..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 458999999999999999999999 8999998754
No 266
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.17 E-value=0.0051 Score=58.11 Aligned_cols=36 Identities=25% Similarity=0.503 Sum_probs=33.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~ 92 (381)
..+|+|||||++|+.+|..|++.|.+|+++|+.+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 468999999999999999999999999999998764
No 267
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.12 E-value=0.0054 Score=58.17 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||+|.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 212 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF 212 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC
Confidence 4689999999999999999999999999999877543
No 268
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.11 E-value=0.0082 Score=47.36 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=30.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
..+|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 457999999999999999999999999999986
No 269
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.99 E-value=0.007 Score=57.06 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=33.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh
Confidence 4689999999999999999999999999999987643
No 270
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.84 E-value=0.0089 Score=48.70 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHC-CCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~-g~~v~~~e~~~ 90 (381)
...+|+|+|+|..|...|..|.+. |++|+++|++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 355899999999999999999999 99999999865
No 271
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.80 E-value=0.0094 Score=56.41 Aligned_cols=37 Identities=32% Similarity=0.456 Sum_probs=33.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 4589999999999999999999999999999986643
No 272
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.79 E-value=0.0086 Score=53.37 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||||..|...|..++..|++|+++|.++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45689999999999999999999999999999765
No 273
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.78 E-value=0.0084 Score=56.87 Aligned_cols=38 Identities=37% Similarity=0.475 Sum_probs=34.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHC-CCceEEEeccccCC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~-g~~v~~~e~~~~~g 93 (381)
...+++|||+|.+|+.+|..|++. |.+|+++|+.+.+.
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l 196 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM 196 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc
Confidence 356899999999999999999999 99999999877543
No 274
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.74 E-value=0.0092 Score=57.55 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=32.4
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~ 92 (381)
+.+++|||||+.|+..|..+++.|.+|+|+++...+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L 258 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL 258 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc
Confidence 458999999999999999999999999999976554
No 275
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.73 E-value=0.01 Score=45.88 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=30.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999754
No 276
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.67 E-value=0.0091 Score=56.09 Aligned_cols=37 Identities=32% Similarity=0.518 Sum_probs=33.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+|+|||.|.+|+++|..|.++|++|+++|.+...-
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 3579999999999999999999999999999877543
No 277
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.62 E-value=0.011 Score=55.63 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35689999999999999999999999999999864
No 278
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.61 E-value=0.0098 Score=50.01 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=31.1
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
++|+|+|+|..|...|..|.+.|++|+++|++..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3699999999999999999999999999998653
No 279
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.60 E-value=0.014 Score=49.53 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=31.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+.|+|.|| |..|...|..|.++|++|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4678999998 9999999999999999999998764
No 280
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.57 E-value=0.013 Score=55.69 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=33.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 221 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL 221 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc
Confidence 4689999999999999999999999999999987643
No 281
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.53 E-value=0.012 Score=56.21 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=33.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 5689999999999999999999999999999987654
No 282
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=95.37 E-value=0.019 Score=54.35 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=33.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~ 92 (381)
...+|+|||+|.+|+.+|..|++.|.+|+++++++.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 4578999999999999999999999999999988654
No 283
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.35 E-value=0.018 Score=51.05 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=31.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999764
No 284
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.29 E-value=0.016 Score=54.91 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 57899999999999999999999999999999754
No 285
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.26 E-value=0.022 Score=55.59 Aligned_cols=37 Identities=22% Similarity=0.418 Sum_probs=33.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||+|.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 223 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM 223 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 4689999999999999999999999999999877544
No 286
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.26 E-value=0.017 Score=55.26 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=33.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||+|.+|+..|..|.+.|.+|+++|+.+.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 4689999999999999999999999999999987654
No 287
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.15 E-value=0.02 Score=51.21 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=31.1
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999865
No 288
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.11 E-value=0.019 Score=54.67 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=33.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+|+|||||.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 234 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL 234 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc
Confidence 4689999999999999999999999999999887654
No 289
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.09 E-value=0.02 Score=50.24 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=31.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 589999999999999999999999999999865
No 290
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.06 E-value=0.024 Score=53.84 Aligned_cols=37 Identities=32% Similarity=0.410 Sum_probs=33.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||||.+|+.+|..|++.|.+|+++++.+.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 4689999999999999999999999999999877643
No 291
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.99 E-value=0.023 Score=50.83 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=31.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.|||+|..|.+.|..|++.|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999875
No 292
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.99 E-value=0.021 Score=51.17 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+|+|||+|.+|+.+|..|.+.|.+|+++++++.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 356899999999999999999999999999998654
No 293
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.99 E-value=0.02 Score=55.46 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457899999999999999999999999999999764
No 294
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.97 E-value=0.03 Score=50.30 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
...+|+|||+|..|...|..|+..|+ +|+++|.+.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 34689999999999999999999998 999999765
No 295
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.95 E-value=0.021 Score=50.89 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999865
No 296
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.95 E-value=0.028 Score=51.59 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|+|||+|.+|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35789999999999999999999999999999865
No 297
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.92 E-value=0.023 Score=50.79 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=31.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 46899999999999999999999999999997653
No 298
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.91 E-value=0.023 Score=50.52 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=33.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~ 92 (381)
...+|+|||+|.+|+.+|..|++.|.+|+++++.+.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 3568999999999999999999999999999987654
No 299
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.90 E-value=0.026 Score=53.92 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=33.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHC---CCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~---g~~v~~~e~~~~~g 93 (381)
..+++|||||.+|+.+|..|++. |.+|+++|+.+.+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 230 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL 230 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc
Confidence 46899999999999999999999 99999999987643
No 300
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.90 E-value=0.023 Score=51.02 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+|+|||+|.+|+..|..|++.|.+|+++++++.
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 357899999999999999999999999999998654
No 301
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.89 E-value=0.027 Score=52.47 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....+|.|||.|+.||..|..|++.|++|+.+|-+.
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 356799999999999999999999999999999764
No 302
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.84 E-value=0.019 Score=49.89 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999999754
No 303
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.82 E-value=0.028 Score=53.60 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=33.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHC---CCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~---g~~v~~~e~~~~~g 93 (381)
..+++|||||.+|+.+|..|.+. |.+|+++|+.+.+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 46899999999999999999999 99999999987644
No 304
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.81 E-value=0.03 Score=49.14 Aligned_cols=33 Identities=21% Similarity=0.185 Sum_probs=30.6
Q ss_pred eEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
+|.|||+|..|...|..|++.|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999988653
No 305
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.79 E-value=0.033 Score=46.44 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456899999999999999999999999999988654
No 306
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.77 E-value=0.037 Score=51.90 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=32.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
-.+|.|||+|..|...|..|++.|++|+++|.++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 45899999999999999999999999999998754
No 307
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.75 E-value=0.037 Score=52.47 Aligned_cols=37 Identities=35% Similarity=0.430 Sum_probs=33.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||+|.+|+.+|..|++.|.+|+++++.+.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 216 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL 216 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Confidence 4689999999999999999999999999999987643
No 308
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.73 E-value=0.029 Score=47.19 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
....|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4678999999999999999999999999999864
No 309
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.73 E-value=0.024 Score=53.25 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=33.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCc-eEEEeccccC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~-v~~~e~~~~~ 92 (381)
...+|+|||+|.+|+.+|..|++.|.+ |+++++++..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 357899999999999999999999999 9999987643
No 310
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.72 E-value=0.03 Score=50.95 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999764
No 311
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.67 E-value=0.035 Score=52.00 Aligned_cols=36 Identities=19% Similarity=0.488 Sum_probs=33.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
....+.|||.|..|+..|..|++.|++|++++++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 567999999999999999999999999999998764
No 312
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.67 E-value=0.028 Score=52.84 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=31.2
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|+..|..|++.|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999875
No 313
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.67 E-value=0.031 Score=49.91 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=31.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
.++|+|||+|..|...|..|++.|+ +|++++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999864
No 314
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.64 E-value=0.037 Score=49.64 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=31.0
Q ss_pred CCeEEEEcCChhHHH-HHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~-~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+|.|||.|-+|++ +|..|.++|++|++.|++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 468999999999997 78888999999999998753
No 315
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.56 E-value=0.044 Score=48.76 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..++|.|||.|..|...|..|++.|++|++++++..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 456899999999999999999999999999998753
No 316
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.55 E-value=0.042 Score=51.79 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=31.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~~ 91 (381)
...+|+|||||.+|+-+|..+.+.|. +|+++++++.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 46789999999999999999999997 5999988654
No 317
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.48 E-value=0.031 Score=49.30 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=30.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999864
No 318
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=94.47 E-value=0.033 Score=49.75 Aligned_cols=37 Identities=24% Similarity=0.439 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~ 92 (381)
...+|+|||+|.+|+.+|..|.+.|.+|+++++.+..
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 4568999999999999999999999999999987654
No 319
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.46 E-value=0.036 Score=48.77 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||+|..|...|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4679999999999999999999 999999999865
No 320
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.44 E-value=0.039 Score=53.04 Aligned_cols=36 Identities=17% Similarity=0.363 Sum_probs=33.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
.+++|||+|.+|+.+|..|.+.|.+|+++|+.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 789999999999999999999999999999987644
No 321
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.44 E-value=0.036 Score=49.23 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=30.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999999999999999854
No 322
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.40 E-value=0.042 Score=51.84 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHC-CC-ceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADA-GH-KPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~-g~-~v~~~e~~~~ 91 (381)
..++|.|||+|..|+..|..|++. |+ +|++++.+..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999998765
No 323
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.37 E-value=0.04 Score=50.07 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
-.+.+|||+|||.+|+.+|..|...|. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 457899999999999999999999998 999999975
No 324
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.29 E-value=0.018 Score=54.28 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..++|+|+|+|-.|...|..|.+.|++|+|+|++..
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 357899999999999999999999999999998753
No 325
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=94.27 E-value=0.054 Score=51.43 Aligned_cols=34 Identities=32% Similarity=0.544 Sum_probs=31.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+++|||+|.+|+.+|..|++.|.+|+++++..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 4589999999999999999999999999999753
No 326
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.27 E-value=0.049 Score=46.60 Aligned_cols=36 Identities=28% Similarity=0.405 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 467899999999999999999999999999998653
No 327
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.27 E-value=0.045 Score=49.27 Aligned_cols=33 Identities=30% Similarity=0.285 Sum_probs=30.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
.++|.|||+|..|...|..|++.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 358999999999999999999999999999975
No 328
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.26 E-value=0.049 Score=47.79 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=31.5
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
++|.|||.|..|...|..|++.|++|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998754
No 329
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.26 E-value=0.045 Score=48.96 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 45799999999999999999999999999999865
No 330
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.26 E-value=0.052 Score=48.69 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
..+|.|||+|..|...|..|+..|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3689999999999999999999998 999999865
No 331
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.26 E-value=0.042 Score=49.10 Aligned_cols=34 Identities=44% Similarity=0.630 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||+|..|...|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 4678999999999999999999999999999 654
No 332
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.25 E-value=0.036 Score=51.89 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=30.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|+..|..|++.|++|++++++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999999754
No 333
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.20 E-value=0.043 Score=49.82 Aligned_cols=35 Identities=31% Similarity=0.275 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..++|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999864
No 334
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.17 E-value=0.04 Score=52.94 Aligned_cols=36 Identities=31% Similarity=0.306 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 356899999999999999999999999999987554
No 335
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.11 E-value=0.048 Score=48.40 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.2
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
++|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 999998764
No 336
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.10 E-value=0.05 Score=48.22 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999999865
No 337
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.07 E-value=0.048 Score=48.47 Aligned_cols=33 Identities=36% Similarity=0.508 Sum_probs=30.4
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.++|.|||+|..|.+.|..|+ .|++|+++.++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 368999999999999999999 999999999875
No 338
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.05 E-value=0.054 Score=45.31 Aligned_cols=35 Identities=29% Similarity=0.238 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999998764
No 339
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.04 E-value=0.045 Score=50.90 Aligned_cols=35 Identities=31% Similarity=0.545 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...++|.|||+|..|+..|..|++ |++|++++.+.
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 345689999999999999999998 99999999765
No 340
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.04 E-value=0.051 Score=48.91 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+++|.|||+|..|...|..|++.|++|++++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 46799999999999999999999999999998853
No 341
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.00 E-value=0.054 Score=51.09 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.|||+|..|...|..|++.|++|+++|.++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999764
No 342
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.97 E-value=0.056 Score=49.06 Aligned_cols=35 Identities=31% Similarity=0.585 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
.+.+|+|+|||.+|..+|..|...|. +|+++|+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 57899999999999999999999998 899999863
No 343
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.90 E-value=0.13 Score=44.75 Aligned_cols=61 Identities=13% Similarity=0.164 Sum_probs=47.9
Q ss_pred ceEEecCCcCccchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCCeEEEecEEEEccCHH
Q 016871 262 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (381)
Q Consensus 262 ~~~~~~~~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G~~i~ad~VI~A~~~~ 329 (381)
...++..+ +..+...+.+.+++.|++++. ++|++|..+ + .|++.+|+++.+|.||+|+|..
T Consensus 165 ~v~~v~~~-~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~~--~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 165 ETTFFTNG-IVEPDADQHALLAARGVRVET-TRIREIAGH--A---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp EEEEECTT-TCCCCHHHHHHHHHTTCEEEC-SCEEEEETT--E---EEEETTSCEEEESEEEECCEEE
T ss_pred cEEEEECC-CCCCCHHHHHHHHHCCcEEEc-ceeeeeecC--C---eEEeCCCCEEEEEEEEEccCcc
Confidence 44444443 447788899999999999985 999999752 2 4788899899999999999755
No 344
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.88 E-value=0.059 Score=48.12 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=31.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
..+|.|||+|..|...|..|++.|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3689999999999999999999998 999999764
No 345
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.87 E-value=0.023 Score=44.24 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=30.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...|+|||+|..|...|..|.+.|++|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5689999999999999999999999999998754
No 346
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.87 E-value=0.055 Score=50.19 Aligned_cols=35 Identities=31% Similarity=0.453 Sum_probs=32.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+|+|||.|-.|...|..|.+.|++|+++|.+..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999998753
No 347
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=93.85 E-value=0.036 Score=52.99 Aligned_cols=58 Identities=22% Similarity=0.243 Sum_probs=41.5
Q ss_pred CeEEEEcCChhHHHHHHHHHHC--------------CCceEEEeccccCCceeeeeeCCCCCeeecceeeeccCCccHHH
Q 016871 58 LKVVIAGAGLAGLSTAKYLADA--------------GHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQN 123 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~--------------g~~v~~~e~~~~~gg~~~~~~~~~g~~~d~G~~~~~~~~~~~~~ 123 (381)
..++|||||++|+.+|..|++. ..+|+++|+.+.+-..... .....+.+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~-----------------~~~~~~~~ 280 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEK-----------------KLSSYAQS 280 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCH-----------------HHHHHHHH
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCH-----------------HHHHHHHH
Confidence 4799999999999999998753 3689999998875432211 00123567
Q ss_pred HHHHhCCCc
Q 016871 124 LFGELGIND 132 (381)
Q Consensus 124 l~~~~gl~~ 132 (381)
.+++.|++.
T Consensus 281 ~L~~~GV~v 289 (502)
T 4g6h_A 281 HLENTSIKV 289 (502)
T ss_dssp HHHHTTCEE
T ss_pred HHHhcceee
Confidence 778888764
No 348
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.85 E-value=0.066 Score=49.45 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=31.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...|+|||+|.+|+.+|..+...|.+|++++.+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 56899999999999999999999999999997653
No 349
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.82 E-value=0.058 Score=48.89 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=30.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999998864
No 350
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=93.74 E-value=0.067 Score=47.17 Aligned_cols=35 Identities=34% Similarity=0.448 Sum_probs=31.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+++|||+|.+|+.+|..|.+.|.+|+++++.+.
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 46899999999999999999999999999987654
No 351
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=93.73 E-value=0.071 Score=50.28 Aligned_cols=36 Identities=25% Similarity=0.395 Sum_probs=33.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~ 92 (381)
..+++|||+|.+|+..|..|.+.|.+|+++++.+.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 568999999999999999999999999999997754
No 352
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=93.71 E-value=0.083 Score=51.00 Aligned_cols=37 Identities=41% Similarity=0.599 Sum_probs=34.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~ 92 (381)
..+|++|||||++|+.+|.+|++.|.+|+|||+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 5689999999999999999999999999999997643
No 353
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.66 E-value=0.052 Score=48.70 Aligned_cols=30 Identities=30% Similarity=0.366 Sum_probs=29.0
Q ss_pred eEEEEcCChhHHHHHHHHHHCCCceEEEec
Q 016871 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~ 88 (381)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 354
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.63 E-value=0.075 Score=50.44 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=33.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccccCC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~~g 93 (381)
..+++|||+|.+|+..|..|++.|.+|+++++.+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 227 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL 227 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc
Confidence 5689999999999999999999999999999877543
No 355
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.61 E-value=0.087 Score=47.08 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=30.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
..+|+|||+|..|...|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3589999999999999999999998 999999754
No 356
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.53 E-value=0.077 Score=47.16 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=29.7
Q ss_pred CeEEEEcCChhHHHHHHHHHHC--CCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~ 90 (381)
++|+|||+|..|.+.|..|++. |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3799999999999999999985 78999999864
No 357
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.53 E-value=0.071 Score=44.32 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=29.5
Q ss_pred eEEEEc-CChhHHHHHHHHHHCCCceEEEeccc
Q 016871 59 KVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 59 ~v~iiG-~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
+|.||| +|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999998753
No 358
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.46 E-value=0.086 Score=48.42 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|+|||+|.+|+.+|..+...|.+|++++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999764
No 359
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.44 E-value=0.05 Score=50.36 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|+..|..|++ |++|++++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999864
No 360
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.41 E-value=0.058 Score=47.60 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=32.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 361
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.40 E-value=0.067 Score=50.68 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=31.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3479999999999999999999999999999875
No 362
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.39 E-value=0.063 Score=47.08 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.2
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
.+|.|||.|..|...|..|++.|++|++++++..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3799999999999999999999999999998754
No 363
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.38 E-value=0.096 Score=46.77 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
...+|.|||+|..|.+.|+.|+..|+ +|+++|.+.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 35689999999999999999999998 999999765
No 364
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.36 E-value=0.11 Score=46.14 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999865
No 365
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.36 E-value=0.087 Score=47.92 Aligned_cols=34 Identities=32% Similarity=0.480 Sum_probs=31.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...|+|+|+|.+|+.++..|...|.+|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999764
No 366
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.32 E-value=0.077 Score=46.91 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999998864
No 367
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.21 E-value=0.1 Score=45.35 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....++|+|+|-+|.++|..|++.|.+|+++.++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 34689999999999999999999999999998753
No 368
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.21 E-value=0.099 Score=47.52 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.2
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..|+|||||..|..+|+.+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4799999999999999999999999999997654
No 369
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.21 E-value=0.094 Score=47.86 Aligned_cols=34 Identities=32% Similarity=0.509 Sum_probs=31.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...|+|+|+|..|+.+|..|...|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999764
No 370
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.15 E-value=0.12 Score=45.89 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=31.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+|.|||+|..|...|..|++.|++|++++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998653
No 371
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.15 E-value=0.09 Score=47.74 Aligned_cols=35 Identities=17% Similarity=0.389 Sum_probs=31.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45799999999999999999999999999999865
No 372
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.13 E-value=0.11 Score=43.11 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=29.9
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 36999995 9999999999999999999998864
No 373
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.09 E-value=0.034 Score=46.95 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
..++|.|||+|..|.+.|..|.+.|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4568999999999999999999999999999875
No 374
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.09 E-value=0.092 Score=50.01 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=31.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHH----CCCceEEEeccccC
Q 016871 57 PLKVVIAGAGLAGLSTAKYLAD----AGHKPLLLEARDVL 92 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~----~g~~v~~~e~~~~~ 92 (381)
..+|+|||||.+|+.+|..|++ .|.+|+++++.+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~ 219 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN 219 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc
Confidence 4689999999999999999987 47899999987643
No 375
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.08 E-value=0.11 Score=46.26 Aligned_cols=33 Identities=33% Similarity=0.436 Sum_probs=31.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC-ceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~ 89 (381)
..+|.|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999987
No 376
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.03 E-value=0.09 Score=45.82 Aligned_cols=35 Identities=14% Similarity=0.104 Sum_probs=31.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
.++|+|+|||..|...+..|.++|++|+++.++..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 46899999999999999999999999999988653
No 377
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.02 E-value=0.12 Score=45.12 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=31.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+.|+|.|+|..|...+..|.+.|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3579999999999999999999999999998864
No 378
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.96 E-value=0.12 Score=44.70 Aligned_cols=34 Identities=24% Similarity=0.206 Sum_probs=31.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...++|||+|-+|.++|+.|++.|.+|+|+.+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6789999999999999999999999999997753
No 379
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.95 E-value=0.1 Score=46.49 Aligned_cols=34 Identities=21% Similarity=0.114 Sum_probs=31.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCC-CceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g-~~v~~~e~~~ 90 (381)
..+|.|||.|..|...|..|++.| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999875
No 380
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.95 E-value=0.082 Score=47.19 Aligned_cols=33 Identities=33% Similarity=0.427 Sum_probs=30.1
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
++|.|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 379999999999999999999998 999999764
No 381
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.94 E-value=0.11 Score=43.35 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=30.0
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 36999998 9999999999999999999998764
No 382
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.92 E-value=0.12 Score=45.95 Aligned_cols=33 Identities=36% Similarity=0.536 Sum_probs=30.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
.+|+|||+|..|...|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 899999754
No 383
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.91 E-value=0.1 Score=45.51 Aligned_cols=32 Identities=31% Similarity=0.408 Sum_probs=29.8
Q ss_pred eEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
+|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 68999999999999999999999999998764
No 384
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=92.90 E-value=0.13 Score=45.15 Aligned_cols=34 Identities=24% Similarity=0.530 Sum_probs=30.7
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHCCCceEEEecccc
Q 016871 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 58 ~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
++|+|.|| |+.|...+..|.++|++|+++-+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 57999998 99999999999999999999987643
No 385
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.89 E-value=0.1 Score=44.77 Aligned_cols=35 Identities=37% Similarity=0.528 Sum_probs=31.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC-ceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~~ 91 (381)
..+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4689999999999999999999997 8999998654
No 386
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.82 E-value=0.1 Score=49.49 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=30.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHC--CCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~ 90 (381)
.++|.|||.|..|+..|..|++. |++|++++++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999998 79999999753
No 387
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.81 E-value=0.16 Score=45.38 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
...+|.|||+|..|.++|+.|+..|. +|+++|.+.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 45799999999999999999999987 899999754
No 388
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.80 E-value=0.07 Score=44.81 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=30.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEE-Eeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~-~e~~~ 90 (381)
.++|.|||+|..|.+.|..|++.|++|++ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 46899999999999999999999999998 76643
No 389
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.74 E-value=0.094 Score=46.16 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.9
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
++|.|||+|..|.+.|+.|+..|+ +|+++|.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999987 899999764
No 390
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.72 E-value=0.14 Score=45.55 Aligned_cols=34 Identities=32% Similarity=0.344 Sum_probs=31.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
..+|.|||.|..|.+.|..|.+.|+ +|+++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 999999875
No 391
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.69 E-value=0.097 Score=45.12 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=29.8
Q ss_pred eEEEEcCChhHHHHHHHHHHCC-CceEEEeccc
Q 016871 59 KVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g-~~v~~~e~~~ 90 (381)
+|.|||+|..|...|..|++.| ++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999864
No 392
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.68 E-value=0.12 Score=47.19 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....|+|||+|..|..+|..+...|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35689999999999999999999999999999764
No 393
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.66 E-value=0.12 Score=46.07 Aligned_cols=34 Identities=32% Similarity=0.363 Sum_probs=30.4
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
..+|+|||+|..|.+.|+.|+..|. +|+++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999987 899999754
No 394
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.65 E-value=0.099 Score=54.55 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
..+|+|||||.+|+.+|..+.+.|. +|+++++++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3489999999999999999999996 899999876
No 395
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.62 E-value=0.095 Score=46.53 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=30.1
Q ss_pred CeEEEEcCChhHHHHHHHHHHCC--CceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g--~~v~~~e~~~ 90 (381)
++|.|||+|..|.+.|..|++.| ++|++++++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 7999999864
No 396
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.62 E-value=0.13 Score=46.37 Aligned_cols=35 Identities=29% Similarity=0.250 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||.|..|.+.|..|.+.|++|+++++++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34579999999999999999999999999999875
No 397
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=92.56 E-value=0.098 Score=46.96 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=29.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
...+|+|||+|.+|+.+|..|++.| +|+++.++
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 4578999999999999999999998 69999875
No 398
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.52 E-value=0.1 Score=48.54 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+.-|||.|..|+..|..|++.|++|+++|.+..
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 346899999999999999999999999999998753
No 399
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.48 E-value=0.087 Score=46.79 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=29.9
Q ss_pred CeEEEEcCChhHHHHHHHHHHC-----C-CceEEEecc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADA-----G-HKPLLLEAR 89 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~-----g-~~v~~~e~~ 89 (381)
++|.|||+|..|...|..|++. | ++|+++++.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~ 46 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARG 46 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcH
Confidence 5899999999999999999999 9 999999873
No 400
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.48 E-value=0.11 Score=45.20 Aligned_cols=35 Identities=26% Similarity=0.141 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....++|+|+|-+|.++|+.|++.|.+|+|+.++.
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35689999999999999999999999999998753
No 401
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.43 E-value=0.11 Score=46.08 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEecc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~ 89 (381)
...+|.|||.|..|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 35689999999999999999999999 99999985
No 402
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.37 E-value=0.14 Score=45.15 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=31.1
Q ss_pred CCeEEEEc-CChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG-~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35799999 99999999999999999999998764
No 403
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.29 E-value=0.065 Score=48.84 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=30.2
Q ss_pred eEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999998764
No 404
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.29 E-value=0.12 Score=45.43 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=30.7
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|...|..|.+.|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998764
No 405
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.26 E-value=0.15 Score=45.49 Aligned_cols=34 Identities=29% Similarity=0.411 Sum_probs=30.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
..+|.|||+|..|.+.|+.|+..|. +|+++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999887 899999753
No 406
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.23 E-value=0.17 Score=45.06 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
..+|.|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999888 999999764
No 407
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.22 E-value=0.14 Score=45.07 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=29.8
Q ss_pred eEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 68999999999999999999999999998764
No 408
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.20 E-value=0.15 Score=44.97 Aligned_cols=35 Identities=11% Similarity=0.075 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
....++|||+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 35689999999999999999999997 999998753
No 409
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.19 E-value=0.13 Score=51.29 Aligned_cols=34 Identities=32% Similarity=0.338 Sum_probs=31.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.|||+|..|...|..|++.|++|+++|.++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999764
No 410
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.16 E-value=0.14 Score=45.19 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=31.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998764
No 411
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.15 E-value=0.12 Score=48.70 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=30.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHC--CCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~ 90 (381)
++|.|||.|..|+..|..|++. |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 89999999753
No 412
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.10 E-value=0.14 Score=48.13 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
....|+|||+|-+|...|..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3568999999999999999999999999999974
No 413
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.08 E-value=0.14 Score=44.72 Aligned_cols=33 Identities=27% Similarity=0.379 Sum_probs=30.8
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+|.|||+ |..|...|..|.+.|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999764
No 414
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.08 E-value=0.21 Score=44.71 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
....+|.|||+|..|.++|+.|+..|. +++++|.+.
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 356799999999999999999999887 899999754
No 415
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.06 E-value=0.14 Score=45.41 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=29.7
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
++|.|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999886 899999765
No 416
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=92.01 E-value=0.15 Score=48.00 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHC--------------------C-CceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADA--------------------G-HKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~--------------------g-~~v~~~e~~~~ 91 (381)
...+|+|||+|.+|+.+|..|++. | .+|+|+++++.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 356899999999999999999974 5 48999998764
No 417
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.01 E-value=0.19 Score=41.03 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=30.6
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
+.|+|+|| |..|...+..|.+.|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999998 9999999999999999999998864
No 418
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.00 E-value=0.15 Score=44.38 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=30.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
.+|.|||+|..|.+.|..|.+.|+ +|++++++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 379999999999999999999998 899998764
No 419
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.99 E-value=0.068 Score=45.26 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+|+|+|+|..|...|..|.+.|+ |+++|++..
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 35689999999999999999999999 999998653
No 420
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.99 E-value=0.16 Score=48.00 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=31.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 421
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.95 E-value=0.15 Score=45.00 Aligned_cols=34 Identities=21% Similarity=0.418 Sum_probs=30.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
..+|.|||+|..|...|+.|+..|. +|+++|.+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999998 999999865
No 422
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.84 E-value=0.21 Score=44.13 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=31.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....|.|||+|-.|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45789999999999999999999999999999764
No 423
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=91.80 E-value=0.16 Score=46.23 Aligned_cols=40 Identities=28% Similarity=0.432 Sum_probs=34.6
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHCCC---ceEEEeccc-cCCce
Q 016871 56 KPLKVVIAGA-GLAGLSTAKYLADAGH---KPLLLEARD-VLGGK 95 (381)
Q Consensus 56 ~~~~v~iiG~-G~~G~~~a~~l~~~g~---~v~~~e~~~-~~gg~ 95 (381)
...+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4679999999 9999999999999997 999999876 34543
No 424
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=91.71 E-value=0.18 Score=47.92 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999864
No 425
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.67 E-value=0.14 Score=48.54 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+.+|.|||.|..|...|..|++.|++|++++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45689999999999999999999999999998864
No 426
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.64 E-value=0.18 Score=47.32 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....++|+|+|..|.++|..|+..|.+|++.|.++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45789999999999999999999999999998764
No 427
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.63 E-value=0.18 Score=45.07 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCC----CceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g----~~v~~~e~~~ 90 (381)
..++|.|||+|..|.+.|..|.+.| ++|++++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3468999999999999999999999 8999998764
No 428
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.60 E-value=0.23 Score=43.69 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....|.|||+|-.|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999754
No 429
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.58 E-value=0.19 Score=45.14 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=30.7
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHCCCceEEEecccc
Q 016871 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 55 ~~~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
...+.|+|.|| |..|...+..|.+.|++|+++.+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 35668999998 99999999999999999999988754
No 430
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=91.57 E-value=0.22 Score=49.57 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=33.0
Q ss_pred CCCeEEEEc--CChhHHHHHHHHHHCCCceEEEeccccC
Q 016871 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG--~G~~G~~~a~~l~~~g~~v~~~e~~~~~ 92 (381)
...+|+||| +|.+|+.+|..|++.|.+|+++++.+.+
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 456899999 9999999999999999999999986653
No 431
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.56 E-value=0.18 Score=44.96 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
...+|+|||+|..|.++|+.|+..|. +++++|.+.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 45689999999999999999999887 899999753
No 432
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.50 E-value=0.16 Score=50.58 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=31.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
-.+|.|||+|..|...|..|++.|++|+++|.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999764
No 433
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.49 E-value=0.16 Score=44.45 Aligned_cols=32 Identities=28% Similarity=0.261 Sum_probs=29.3
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+|.|||+|..|...|..|.+ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 369999999999999999999 99999998764
No 434
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.49 E-value=0.12 Score=47.19 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=31.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHCC-------CceEEEecccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g-------~~v~~~e~~~~ 91 (381)
.+|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999988654
No 435
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=91.47 E-value=0.16 Score=47.99 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.6
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999854
No 436
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.47 E-value=0.18 Score=43.89 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|+|||+|-.|.+.|..|.+.|.+|++++++.
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 34689999999999999999999999999998763
No 437
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.44 E-value=0.11 Score=47.11 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=31.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCC-------CceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g-------~~v~~~e~~~~ 91 (381)
.++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 358999999999999999999999 99999998654
No 438
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=91.42 E-value=0.34 Score=43.20 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=31.8
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 55 ~~~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.....|+|.|| |..|...+..|.+.|++|+++.++.
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 34568999998 9999999999999999999998753
No 439
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.41 E-value=0.21 Score=42.59 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=30.5
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCC----ceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGH----KPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~----~v~~~e~~~ 90 (381)
.+|.|||+|..|.+.|..|.+.|+ +|+++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999864
No 440
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.38 E-value=0.19 Score=47.65 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=30.7
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999764
No 441
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.33 E-value=0.18 Score=43.36 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=31.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCC----CceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g----~~v~~~e~~~~ 91 (381)
.++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 358999999999999999999999 79999998654
No 442
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.17 E-value=0.27 Score=43.61 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEecc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~ 89 (381)
....++|+|+|-+|.++|+.|++.|. +|+|+.+.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 46789999999999999999999998 89999876
No 443
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.17 E-value=0.19 Score=43.73 Aligned_cols=35 Identities=20% Similarity=0.098 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
....++|||+|-+|.++|+.|.+.|. +|+|+.+..
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 35689999999999999999999998 899998764
No 444
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=91.13 E-value=0.21 Score=44.24 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.4
Q ss_pred CCCeEEEEcCC-hhHHHHHHHHHHCCCceEEEecc
Q 016871 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 56 ~~~~v~iiG~G-~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
...+++|||+| +.|..+|..|...|.+|++.+++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 56799999999 67999999999999999998764
No 445
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=91.12 E-value=0.17 Score=43.45 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=30.5
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|...|..|.+.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 589999999999999999999999999998764
No 446
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.06 E-value=0.27 Score=42.87 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
....++|+|+|-+|.++|+.|.+.|. +|+|+.+..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 46789999999999999999999998 899998754
No 447
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.99 E-value=0.25 Score=44.47 Aligned_cols=34 Identities=29% Similarity=0.236 Sum_probs=31.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 3579999999999999999999999999998764
No 448
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.97 E-value=0.1 Score=48.19 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=28.1
Q ss_pred CeEEEEcCChhHHHHHHHHHH-CCCceEEEe
Q 016871 58 LKVVIAGAGLAGLSTAKYLAD-AGHKPLLLE 87 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~-~g~~v~~~e 87 (381)
++|.|||+|..|...|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 499999998
No 449
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=90.96 E-value=0.34 Score=43.52 Aligned_cols=35 Identities=26% Similarity=0.244 Sum_probs=30.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 56 KPLKVVIAGA-GLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~-G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
...+|+|||+ |..|.++|+.++..|. +|+++|.+.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 4578999997 9999999999999884 899999753
No 450
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.96 E-value=0.27 Score=42.17 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=29.9
Q ss_pred eEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 59 KVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
.++|||+|-+|.++++.|.+.|. +|+|+.+..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899998864
No 451
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=90.87 E-value=0.29 Score=42.70 Aligned_cols=35 Identities=31% Similarity=0.241 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
....++|+|+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 45789999999999999999999998 699997753
No 452
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=90.85 E-value=0.21 Score=48.07 Aligned_cols=35 Identities=14% Similarity=0.319 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....|+|||+|.+|+..|..|++.|.+|+++++.+
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 45789999999999999999999999999999855
No 453
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=90.83 E-value=0.23 Score=44.16 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=29.6
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHCC--CceEEEeccc
Q 016871 58 LKVVIAGA-GLAGLSTAKYLADAG--HKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~-G~~G~~~a~~l~~~g--~~v~~~e~~~ 90 (381)
++|+|||| |..|...|+.|+..| .+|+++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 37999998 999999999999888 6899998765
No 454
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=90.83 E-value=0.17 Score=44.42 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=29.5
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
++|.|||+|..|...|..|.+.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999998 54
No 455
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.83 E-value=0.3 Score=42.62 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=31.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC---ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~---~v~~~e~~~ 90 (381)
..+|.|||+|..|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3679999999999999999999998 999999865
No 456
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.79 E-value=0.29 Score=43.55 Aligned_cols=34 Identities=32% Similarity=0.511 Sum_probs=29.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
..+|+|||+|..|.+.|+.|+..|. +|+++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999998774 899999764
No 457
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.77 E-value=0.2 Score=43.21 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=30.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCc-eEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~-v~~~e~~~ 90 (381)
.++|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999998 89998764
No 458
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.77 E-value=0.31 Score=42.32 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
....++|+|+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 46789999999999999999999995 899997643
No 459
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=90.73 E-value=0.31 Score=43.47 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=31.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+.|+|.|| |..|...+..|++.|++|+++.++.
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4568999998 9999999999999999999998753
No 460
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.70 E-value=0.22 Score=42.93 Aligned_cols=30 Identities=20% Similarity=0.156 Sum_probs=28.2
Q ss_pred eEEEEcCChhHHHHHHHHHHCCCceEEEec
Q 016871 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~ 88 (381)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 689999999999999999999999999876
No 461
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=90.66 E-value=0.23 Score=41.23 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=30.1
Q ss_pred eEEEEc-CChhHHHHHHHHHHCCCceEEEecccc
Q 016871 59 KVVIAG-AGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 59 ~v~iiG-~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
+|+|.| +|..|...+..|.+.|++|+++.++..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE 35 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 689999 799999999999999999999998753
No 462
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.64 E-value=0.22 Score=43.93 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=28.4
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.+||-|..|...|..|.+.|++|++++++.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3479999999999999999999999999999765
No 463
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.64 E-value=0.25 Score=41.27 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=30.9
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHCCCceEEEecccc
Q 016871 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 58 ~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
+.|+|.|| |..|...+..|.++|++|+++.++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 68999995 99999999999999999999988753
No 464
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.62 E-value=0.3 Score=43.11 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=31.9
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
....|+|.|| |..|...+..|.+.|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3568999999 99999999999999999999987654
No 465
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=90.59 E-value=0.27 Score=45.29 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....|+|||.|..|..+|..|...|.+|+++|.++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 46799999999999999999999999999999765
No 466
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=90.55 E-value=0.16 Score=47.33 Aligned_cols=52 Identities=15% Similarity=0.069 Sum_probs=38.3
Q ss_pred cchHHHHHHHHhcCCEEEecceeeEEEEcCCCCEEEEEEeCC--eEEEecEEEEccCH
Q 016871 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPV 328 (381)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~t~~G--~~i~ad~VI~A~~~ 328 (381)
...+.+.+.++++|+++++++.|++|+. ++. .+...+| +++.+|.||+|+|.
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~~--~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--DKV--IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--SEE--EEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeC--Cce--EEEeeCCCceEeecceEEEeccC
Confidence 4445577778889999999999999953 332 2444444 47999999999863
No 467
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=90.51 E-value=0.31 Score=42.51 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
....++|+|+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 46789999999999999999999996 899998753
No 468
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.48 E-value=0.27 Score=46.48 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....|+|||.|..|..+|..|...|.+|+++|..+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999765
No 469
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.45 E-value=0.29 Score=43.58 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=29.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC--ceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~ 89 (381)
..+|+|||+|..|.+.|+.|+..|. .|.++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4699999999999999999998874 89999864
No 470
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=90.32 E-value=0.23 Score=43.56 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=29.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
...++|+|+|-.|.++|..|++.| +|+++.++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 468999999999999999999999 99999775
No 471
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=90.32 E-value=0.24 Score=43.42 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
++|.|||+|-.|.++|+.|..++. +++++|.+.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 479999999999999999998764 799999764
No 472
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.28 E-value=0.32 Score=41.95 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=29.6
Q ss_pred eEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
+++|||+|-.|.+.|..|.+.|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999998753
No 473
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.26 E-value=0.36 Score=48.17 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
-.+|.|||||..|...|+.++..|++|+++|.++
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 4589999999999999999999999999999765
No 474
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=90.25 E-value=0.33 Score=43.97 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~ 89 (381)
....|+|+|+|-.|..+|..|.+.|.+|++.|..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4578999999999999999999999999998853
No 475
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.21 E-value=0.37 Score=42.14 Aligned_cols=35 Identities=29% Similarity=0.378 Sum_probs=31.0
Q ss_pred CCCeEEEEc-CChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG-~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....++|+| +|-+|.++|..|++.|.+|+++.++.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 346899999 99999999999999999999998753
No 476
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=90.19 E-value=0.37 Score=42.64 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEecc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~ 89 (381)
....++|+|+|-+|.++|+.|++.|. +|+|+.+.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45789999999999999999999998 79999876
No 477
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.18 E-value=0.23 Score=47.24 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChhHHH-HHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~-~a~~l~~~g~~v~~~e~~~ 90 (381)
...+|.|||.|-+|++ +|..|.++|++|++.|.+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 3468999999999998 6999999999999999764
No 478
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.07 E-value=0.36 Score=41.35 Aligned_cols=35 Identities=40% Similarity=0.515 Sum_probs=31.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC-ceEEEecccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~~ 91 (381)
..+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 5699999999999999999999997 7899987544
No 479
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.97 E-value=0.35 Score=43.16 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 55 ~~~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
....+|+|||+|..|.+.|+.|+..+. ++.++|.+.
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 345799999999999999999998875 799999753
No 480
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=89.93 E-value=0.34 Score=42.58 Aligned_cols=33 Identities=18% Similarity=0.482 Sum_probs=29.9
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 58 ~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
+.|+|.|| |..|...+..|.++|++|+++.+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 34 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS 34 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 36899999 9999999999999999999998754
No 481
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=89.90 E-value=0.27 Score=43.99 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=30.0
Q ss_pred CCCeEEEEc-CChhHHHHHHHHHHCC--CceEEEeccc
Q 016871 56 KPLKVVIAG-AGLAGLSTAKYLADAG--HKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG-~G~~G~~~a~~l~~~g--~~v~~~e~~~ 90 (381)
..++|+||| +|..|.+.|..|+..| .+|+++|.+.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 346899999 7999999999999988 7899998644
No 482
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.89 E-value=0.38 Score=43.11 Aligned_cols=36 Identities=19% Similarity=0.117 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
....|.|||.|..|...|..|+..|++|+++++...
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 456899999999999999999999999999987643
No 483
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.80 E-value=0.51 Score=43.21 Aligned_cols=36 Identities=22% Similarity=0.199 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
....|+|||+|..|...|..+.+.|++|++++....
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 456899999999999999999999999999987543
No 484
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=89.77 E-value=0.29 Score=46.30 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=31.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3689999999999999999999999999999764
No 485
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.75 E-value=0.41 Score=42.78 Aligned_cols=37 Identities=30% Similarity=0.349 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccccC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~~~ 92 (381)
...+|+|||+|-.|..+|..|+..|. +++|+|....-
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 46799999999999999999999996 78999876543
No 486
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=89.55 E-value=0.31 Score=45.00 Aligned_cols=35 Identities=31% Similarity=0.388 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
....|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45689999999999999999999998 899998764
No 487
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=89.53 E-value=0.39 Score=41.62 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=29.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC-ceEEEecc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~ 89 (381)
...++|||+|-+|-++|+.|.+.|. +|+|+.+.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999996 79999764
No 488
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.46 E-value=0.44 Score=40.92 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=29.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....++|.|| |-.|.+.|..|++.|++|+++.++.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 3456888885 7889999999999999999998754
No 489
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.44 E-value=0.35 Score=42.35 Aligned_cols=37 Identities=35% Similarity=0.468 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC-ceEEEeccccC
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVL 92 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~~~ 92 (381)
...+|+|||+|-.|..+|..|++.|. +++|+|....-
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve 72 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVE 72 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccC
Confidence 45799999999999999999999996 89999976543
No 490
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=89.40 E-value=0.4 Score=43.02 Aligned_cols=34 Identities=32% Similarity=0.359 Sum_probs=30.8
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
...|+|+|| |..|...+..|.+.|++|.++.++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 458999999 9999999999999999999998865
No 491
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.31 E-value=0.36 Score=42.91 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=30.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHCCC--ceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~g~--~v~~~e~~~ 90 (381)
..+|+|||+|..|.+.|+.|+..+. ++.++|.+.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 4799999999999999999998876 899999753
No 492
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=89.29 E-value=0.47 Score=42.28 Aligned_cols=34 Identities=32% Similarity=0.533 Sum_probs=30.6
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+.|+|.|| |..|...+..|.++|++|+++.++.
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCh
Confidence 358999996 9999999999999999999998764
No 493
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=89.26 E-value=0.43 Score=42.57 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=30.7
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHCCCceEEEeccc
Q 016871 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
.+.|+|.|| |..|...+..|+++|++|+++.++.
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCC
Confidence 357999998 9999999999999999999998764
No 494
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=89.18 E-value=0.4 Score=44.51 Aligned_cols=32 Identities=31% Similarity=0.553 Sum_probs=29.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCC---ceEEEe
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLE 87 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~---~v~~~e 87 (381)
...+|+|+|+|-+|.++|..|.+.|. +|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 45689999999999999999999997 899998
No 495
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=89.17 E-value=0.34 Score=42.87 Aligned_cols=32 Identities=34% Similarity=0.451 Sum_probs=28.5
Q ss_pred eEEEEcCChhHHHHHHHHHHCCC-ceEEEeccc
Q 016871 59 KVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (381)
Q Consensus 59 ~v~iiG~G~~G~~~a~~l~~~g~-~v~~~e~~~ 90 (381)
+|.|||+|..|.+.|+.|+..|. +|+++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999998887 699999754
No 496
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.14 E-value=0.82 Score=41.65 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
....|.|||+|..|...|..+.+.|++|++++..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 456899999999999999999999999999987543
No 497
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=89.13 E-value=0.37 Score=42.13 Aligned_cols=34 Identities=29% Similarity=0.244 Sum_probs=30.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHC--CCceEEEeccc
Q 016871 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (381)
Q Consensus 57 ~~~v~iiG~G~~G~~~a~~l~~~--g~~v~~~e~~~ 90 (381)
..+|.|||+|..|.+.|..|.+. |++|++++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 35899999999999999999987 67999998764
No 498
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=89.13 E-value=0.42 Score=44.17 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....|+|||.|..|..+|..|...|.+|+++|.++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 45789999999999999999999999999999865
No 499
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=89.11 E-value=0.41 Score=42.86 Aligned_cols=35 Identities=29% Similarity=0.352 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHCCCceEEEeccc
Q 016871 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (381)
Q Consensus 56 ~~~~v~iiG~G~~G~~~a~~l~~~g~~v~~~e~~~ 90 (381)
....|.|||.|..|...|..|...|++|++++++.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45689999999999999999999999999999754
No 500
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=89.08 E-value=0.49 Score=42.43 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=31.8
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHCCCceEEEecccc
Q 016871 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (381)
Q Consensus 56 ~~~~v~iiG~-G~~G~~~a~~l~~~g~~v~~~e~~~~ 91 (381)
..+.|+|.|| |..|...+..|.++|++|+++.+...
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3568999996 99999999999999999999988543
Done!