Query 016875
Match_columns 381
No_of_seqs 147 out of 1134
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 03:35:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016875.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016875hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 2.8E-73 6.1E-78 580.3 21.5 374 2-380 121-507 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 2.5E-56 5.5E-61 436.9 17.8 317 25-380 115-443 (498)
3 PF00854 PTR2: POT family; In 100.0 8.1E-53 1.8E-57 414.0 9.9 338 24-378 30-371 (372)
4 TIGR00926 2A1704 Peptide:H+ sy 100.0 9.5E-50 2E-54 414.0 26.2 252 27-318 85-343 (654)
5 PRK15462 dipeptide/tripeptide 100.0 1.9E-44 4.1E-49 363.3 22.6 312 28-380 101-427 (493)
6 PRK10207 dipeptide/tripeptide 100.0 5.9E-38 1.3E-42 318.8 23.6 312 28-380 106-428 (489)
7 TIGR00924 yjdL_sub1_fam amino 100.0 3.9E-37 8.5E-42 312.0 23.7 317 27-380 102-430 (475)
8 PRK09584 tppB putative tripept 100.0 7.8E-36 1.7E-40 304.3 21.5 310 27-380 112-431 (500)
9 TIGR00926 2A1704 Peptide:H+ sy 99.1 5.1E-10 1.1E-14 117.3 14.1 253 27-321 82-343 (654)
10 TIGR00900 2A0121 H+ Antiporter 98.8 2.4E-07 5.2E-12 89.2 17.6 86 26-117 91-176 (365)
11 TIGR00901 2A0125 AmpG-related 98.8 6.9E-07 1.5E-11 86.8 19.3 83 29-117 85-175 (356)
12 PF07690 MFS_1: Major Facilita 98.8 1.2E-07 2.5E-12 91.1 13.7 83 27-115 85-167 (352)
13 PRK11646 multidrug resistance 98.6 1.1E-06 2.3E-11 87.5 15.3 83 26-115 98-180 (400)
14 TIGR00893 2A0114 d-galactonate 98.6 2.6E-06 5.6E-11 82.5 17.7 85 26-116 81-165 (399)
15 PRK14995 methyl viologen resis 98.6 3.9E-06 8.4E-11 85.8 18.5 85 26-115 93-177 (495)
16 cd06174 MFS The Major Facilita 98.6 1.9E-06 4.1E-11 82.2 15.3 228 26-380 86-314 (352)
17 TIGR00711 efflux_EmrB drug res 98.5 2.9E-06 6.4E-11 85.7 15.8 84 26-115 89-172 (485)
18 TIGR00895 2A0115 benzoate tran 98.5 1.5E-05 3.3E-10 77.6 19.1 82 26-113 104-185 (398)
19 PRK10489 enterobactin exporter 98.5 1.2E-05 2.5E-10 80.1 18.5 83 28-116 111-193 (417)
20 PRK06814 acylglycerophosphoeth 98.4 5.5E-06 1.2E-10 93.0 16.5 82 26-113 107-188 (1140)
21 TIGR00902 2A0127 phenyl propri 98.4 1E-05 2.2E-10 79.7 16.3 79 27-113 94-172 (382)
22 PRK11551 putative 3-hydroxyphe 98.4 2.4E-05 5.2E-10 77.3 18.0 83 26-114 102-184 (406)
23 PRK03545 putative arabinose tr 98.4 1.4E-05 3.1E-10 78.7 16.3 83 26-114 96-178 (390)
24 PRK15402 multidrug efflux syst 98.3 3.1E-05 6.8E-10 76.6 17.3 83 27-115 101-183 (406)
25 PRK10504 putative transporter; 98.3 4.4E-05 9.5E-10 77.2 18.6 86 27-118 98-183 (471)
26 TIGR00710 efflux_Bcr_CflA drug 98.3 4.1E-05 8.9E-10 74.6 17.3 87 26-118 92-178 (385)
27 PRK10054 putative transporter; 98.3 8.6E-06 1.9E-10 80.8 12.3 78 30-114 99-176 (395)
28 TIGR00879 SP MFS transporter, 98.3 3.9E-05 8.4E-10 76.4 16.7 83 28-116 128-213 (481)
29 PRK11128 putative 3-phenylprop 98.2 3.8E-05 8.2E-10 75.6 16.2 81 26-114 93-173 (382)
30 PRK09874 drug efflux system pr 98.2 1.6E-05 3.4E-10 78.4 13.3 84 26-116 106-189 (408)
31 PF05977 MFS_3: Transmembrane 98.2 0.0001 2.2E-09 75.9 18.1 89 25-119 101-189 (524)
32 PRK05122 major facilitator sup 98.2 0.00017 3.6E-09 71.2 18.7 76 29-110 114-189 (399)
33 TIGR00881 2A0104 phosphoglycer 98.1 8.5E-05 1.8E-09 71.7 15.8 85 26-116 82-167 (379)
34 PRK12382 putative transporter; 98.1 0.00019 4.2E-09 70.6 18.1 76 27-108 112-187 (392)
35 TIGR00894 2A0114euk Na(+)-depe 98.1 0.00016 3.5E-09 73.0 17.9 81 28-114 132-213 (465)
36 PRK08633 2-acyl-glycerophospho 98.1 0.00014 3E-09 81.7 18.2 63 27-95 103-165 (1146)
37 PRK11102 bicyclomycin/multidru 98.1 0.00029 6.2E-09 68.7 17.9 85 26-116 78-162 (377)
38 TIGR00898 2A0119 cation transp 98.0 0.0004 8.6E-09 70.8 19.2 82 26-116 179-260 (505)
39 TIGR00891 2A0112 putative sial 98.0 0.00023 4.9E-09 69.6 16.8 83 26-114 99-183 (405)
40 TIGR00792 gph sugar (Glycoside 98.0 0.00026 5.5E-09 70.6 17.1 81 30-115 102-189 (437)
41 PRK11652 emrD multidrug resist 98.0 0.00054 1.2E-08 67.5 18.8 80 27-112 96-175 (394)
42 PRK12307 putative sialic acid 98.0 0.00013 2.8E-09 72.5 14.2 79 26-110 105-183 (426)
43 TIGR00883 2A0106 metabolite-pr 98.0 0.00032 7E-09 68.0 16.4 80 29-114 98-185 (394)
44 TIGR00899 2A0120 sugar efflux 98.0 0.00049 1.1E-08 66.8 17.5 83 30-116 90-172 (375)
45 PRK10213 nepI ribonucleoside t 97.9 0.00038 8.3E-09 69.0 16.6 83 25-113 106-188 (394)
46 TIGR00890 2A0111 Oxalate/Forma 97.9 0.00029 6.2E-09 67.9 14.0 83 26-115 90-172 (377)
47 KOG1330 Sugar transporter/spin 97.9 4.5E-06 9.7E-11 82.6 1.0 87 26-118 120-208 (493)
48 TIGR00892 2A0113 monocarboxyla 97.8 0.00027 5.8E-09 71.5 13.7 77 35-118 116-192 (455)
49 PRK15011 sugar efflux transpor 97.8 0.00078 1.7E-08 66.6 15.7 45 71-115 145-189 (393)
50 TIGR01301 GPH_sucrose GPH fami 97.8 0.0027 5.8E-08 64.6 19.2 91 28-122 115-220 (477)
51 PRK11010 ampG muropeptide tran 97.7 0.0026 5.6E-08 65.1 19.3 84 26-115 106-190 (491)
52 PRK11043 putative transporter; 97.7 0.0014 3E-08 64.7 16.6 84 26-115 93-176 (401)
53 PF13347 MFS_2: MFS/sugar tran 97.7 0.0012 2.6E-08 66.0 16.1 253 27-379 103-370 (428)
54 PRK15403 multidrug efflux syst 97.7 0.0099 2.1E-07 59.3 21.5 84 26-115 103-186 (413)
55 PRK11663 regulatory protein Uh 97.6 0.0013 2.9E-08 65.9 14.8 80 27-112 111-190 (434)
56 PRK10473 multidrug efflux syst 97.6 0.0031 6.8E-08 62.0 17.1 83 27-115 91-173 (392)
57 PRK11195 lysophospholipid tran 97.6 0.0033 7.2E-08 62.2 17.0 76 31-113 92-167 (393)
58 PRK10077 xylE D-xylose transpo 97.6 0.0048 1E-07 62.2 18.5 82 28-115 121-210 (479)
59 TIGR00903 2A0129 major facilit 97.6 0.0027 5.8E-08 62.5 15.7 76 26-108 78-153 (368)
60 PRK03633 putative MFS family t 97.5 0.0055 1.2E-07 60.1 17.6 72 26-103 93-164 (381)
61 PRK10406 alpha-ketoglutarate t 97.5 0.0066 1.4E-07 60.8 18.4 77 29-111 126-210 (432)
62 PRK09528 lacY galactoside perm 97.5 0.0012 2.7E-08 65.6 12.9 49 69-118 141-189 (420)
63 PRK09848 glucuronide transport 97.5 0.0078 1.7E-07 60.5 18.6 73 294-379 295-374 (448)
64 PRK11273 glpT sn-glycerol-3-ph 97.5 0.0065 1.4E-07 61.3 17.2 80 27-112 120-200 (452)
65 TIGR00896 CynX cyanate transpo 97.4 0.0074 1.6E-07 58.5 16.8 80 27-113 87-168 (355)
66 PRK11902 ampG muropeptide tran 97.4 0.011 2.4E-07 58.4 18.4 83 27-115 94-177 (402)
67 PRK10091 MFS transport protein 97.4 0.005 1.1E-07 60.5 15.5 83 26-114 90-172 (382)
68 TIGR01299 synapt_SV2 synaptic 97.4 0.011 2.5E-07 63.4 19.1 85 26-116 254-351 (742)
69 TIGR00712 glpT glycerol-3-phos 97.4 0.0029 6.2E-08 63.5 14.0 81 28-114 119-200 (438)
70 KOG1237 H+/oligopeptide sympor 97.4 0.00045 9.8E-09 71.7 8.3 216 27-313 59-276 (571)
71 PRK03699 putative transporter; 97.4 0.011 2.4E-07 58.3 18.0 84 26-115 94-178 (394)
72 PRK03893 putative sialic acid 97.4 0.0014 3.1E-08 66.5 11.7 79 26-110 107-185 (496)
73 PRK10642 proline/glycine betai 97.4 0.013 2.7E-07 59.9 18.4 75 29-109 120-202 (490)
74 TIGR01272 gluP glucose/galacto 97.4 0.015 3.3E-07 55.7 17.8 83 25-113 8-107 (310)
75 PRK09705 cynX putative cyanate 97.3 0.01 2.2E-07 58.6 16.6 81 26-113 96-177 (393)
76 TIGR00788 fbt folate/biopterin 97.3 0.0011 2.3E-08 67.5 9.6 80 32-115 125-204 (468)
77 TIGR00886 2A0108 nitrite extru 97.3 0.0053 1.1E-07 59.3 13.8 74 26-106 90-174 (366)
78 PRK09669 putative symporter Ya 97.3 0.013 2.8E-07 58.9 16.6 49 331-379 319-374 (444)
79 TIGR00882 2A0105 oligosacchari 97.2 0.0082 1.8E-07 59.2 14.0 44 69-113 133-176 (396)
80 TIGR02332 HpaX 4-hydroxyphenyl 97.2 0.029 6.3E-07 55.9 17.9 83 26-114 95-183 (412)
81 PRK09952 shikimate transporter 97.1 0.046 9.9E-07 54.9 19.2 77 29-111 127-211 (438)
82 TIGR00897 2A0118 polyol permea 97.1 0.078 1.7E-06 52.4 20.0 70 28-103 106-176 (402)
83 PRK10429 melibiose:sodium symp 97.0 0.026 5.6E-07 57.3 16.0 48 331-378 324-378 (473)
84 TIGR02718 sider_RhtX_FptX side 97.0 0.051 1.1E-06 53.4 17.6 49 68-116 132-180 (390)
85 TIGR00885 fucP L-fucose:H+ sym 96.9 0.07 1.5E-06 53.2 18.0 82 26-113 93-200 (410)
86 PRK05122 major facilitator sup 96.9 0.001 2.2E-08 65.6 4.5 95 28-128 303-397 (399)
87 TIGR00887 2A0109 phosphate:H+ 96.8 0.1 2.2E-06 53.3 18.9 82 27-114 115-219 (502)
88 TIGR00880 2_A_01_02 Multidrug 96.8 0.0019 4.1E-08 52.6 5.0 85 27-117 51-135 (141)
89 TIGR00805 oat sodium-independe 96.7 0.0038 8.3E-08 65.9 7.8 85 27-117 172-278 (633)
90 PRK15075 citrate-proton sympor 96.7 0.15 3.2E-06 51.0 18.5 73 29-107 119-199 (434)
91 PRK09556 uhpT sugar phosphate 96.5 0.047 1E-06 55.3 13.2 86 26-117 121-210 (467)
92 PRK10133 L-fucose transporter; 96.2 0.15 3.1E-06 51.4 15.2 59 26-90 116-174 (438)
93 TIGR00889 2A0110 nucleoside tr 96.2 0.28 6E-06 49.0 16.9 48 332-379 309-357 (418)
94 PRK09874 drug efflux system pr 96.2 0.0045 9.7E-08 60.9 3.8 87 27-119 311-397 (408)
95 PRK12382 putative transporter; 96.1 0.0057 1.2E-07 60.1 4.3 86 28-119 303-388 (392)
96 KOG2532 Permease of the major 96.0 0.23 5.1E-06 50.5 15.5 80 31-116 132-212 (466)
97 PLN00028 nitrate transmembrane 95.9 0.18 3.9E-06 51.3 14.2 80 27-113 124-212 (476)
98 PF00854 PTR2: POT family; In 95.8 0.0049 1.1E-07 60.6 2.2 157 203-375 204-372 (372)
99 PF06609 TRI12: Fungal trichot 95.8 1.4 3.1E-05 46.1 20.1 86 26-118 130-215 (599)
100 PF03209 PUCC: PUCC protein; 95.7 1.4 3E-05 43.7 18.8 50 330-379 300-349 (403)
101 cd06174 MFS The Major Facilita 95.6 0.019 4.2E-07 54.3 5.4 85 27-117 265-349 (352)
102 TIGR00890 2A0111 Oxalate/Forma 95.4 0.016 3.4E-07 55.7 3.9 77 32-114 300-376 (377)
103 TIGR00893 2A0114 d-galactonate 95.1 0.046 1E-06 52.6 6.4 71 41-117 325-396 (399)
104 PRK03545 putative arabinose tr 95.0 0.17 3.6E-06 49.7 10.1 70 295-379 76-145 (390)
105 TIGR00892 2A0113 monocarboxyla 95.0 0.028 6E-07 56.9 4.6 86 27-118 333-419 (455)
106 PRK11551 putative 3-hydroxyphe 95.0 0.37 7.9E-06 47.4 12.4 50 330-379 102-151 (406)
107 COG2814 AraJ Arabinose efflux 94.9 2.3 5E-05 42.2 17.6 87 25-117 99-185 (394)
108 TIGR02332 HpaX 4-hydroxyphenyl 94.9 0.2 4.4E-06 49.8 10.5 50 331-380 96-145 (412)
109 TIGR00889 2A0110 nucleoside tr 94.9 0.021 4.5E-07 57.1 3.3 85 28-118 309-400 (418)
110 PRK03633 putative MFS family t 94.8 0.034 7.3E-07 54.5 4.5 77 32-114 290-366 (381)
111 PRK11462 putative transporter; 94.8 1.8 3.9E-05 43.8 17.2 80 30-114 112-198 (460)
112 PRK10489 enterobactin exporter 94.7 0.032 6.9E-07 55.4 4.0 80 29-114 314-393 (417)
113 COG2271 UhpC Sugar phosphate p 94.4 1.4 3E-05 43.9 14.3 70 46-121 136-208 (448)
114 KOG3764 Vesicular amine transp 94.3 0.052 1.1E-06 53.4 4.4 107 26-137 158-267 (464)
115 TIGR00891 2A0112 putative sial 94.3 0.42 9E-06 46.5 10.8 51 330-380 99-149 (405)
116 KOG1330 Sugar transporter/spin 94.0 0.26 5.7E-06 49.4 8.6 103 251-380 64-170 (493)
117 TIGR00899 2A0120 sugar efflux 93.9 0.069 1.5E-06 51.6 4.4 82 30-118 291-372 (375)
118 PRK09556 uhpT sugar phosphate 93.7 0.13 2.9E-06 51.9 6.3 76 295-380 96-171 (467)
119 PF03092 BT1: BT1 family; Int 93.5 0.21 4.5E-06 50.3 7.2 84 28-115 87-170 (433)
120 PRK12307 putative sialic acid 93.4 1.3 2.8E-05 43.8 12.6 97 257-379 58-154 (426)
121 TIGR01299 synapt_SV2 synaptic 93.3 1.4 3.1E-05 47.5 13.5 50 330-379 254-303 (742)
122 TIGR00711 efflux_EmrB drug res 93.3 0.9 2E-05 45.6 11.5 100 255-380 40-139 (485)
123 PRK09705 cynX putative cyanate 93.2 0.11 2.3E-06 51.3 4.6 78 36-118 301-379 (393)
124 TIGR00880 2_A_01_02 Multidrug 93.2 1.1 2.3E-05 35.9 9.8 49 331-379 51-99 (141)
125 TIGR00879 SP MFS transporter, 93.0 0.15 3.2E-06 50.6 5.2 67 45-117 401-467 (481)
126 TIGR00710 efflux_Bcr_CflA drug 92.9 0.93 2E-05 43.8 10.6 50 330-379 92-141 (385)
127 PRK11646 multidrug resistance 92.7 1.1 2.5E-05 44.2 11.1 69 296-379 79-147 (400)
128 PRK11663 regulatory protein Uh 92.6 1.6 3.4E-05 43.6 12.0 70 296-380 91-160 (434)
129 PRK15034 nitrate/nitrite trans 92.4 11 0.00023 38.5 17.6 57 26-89 127-183 (462)
130 PRK10213 nepI ribonucleoside t 92.3 1.8 3.8E-05 42.7 11.8 94 260-379 63-156 (394)
131 PRK09528 lacY galactoside perm 92.3 0.086 1.9E-06 52.4 2.5 84 28-117 316-400 (420)
132 PF07690 MFS_1: Major Facilita 92.2 1.9 4E-05 40.9 11.5 98 257-380 37-134 (352)
133 TIGR00885 fucP L-fucose:H+ sym 91.9 1.9 4.1E-05 43.0 11.6 102 256-380 42-143 (410)
134 PRK10091 MFS transport protein 91.9 1.9 4.1E-05 42.2 11.4 97 257-379 43-139 (382)
135 PRK11273 glpT sn-glycerol-3-ph 91.9 2.3 5.1E-05 42.7 12.3 73 296-379 96-168 (452)
136 PRK15011 sugar efflux transpor 91.5 0.24 5.2E-06 48.8 4.6 52 67-118 338-389 (393)
137 PF01306 LacY_symp: LacY proto 91.4 1.8 4E-05 43.2 10.6 45 329-373 310-354 (412)
138 PRK14995 methyl viologen resis 91.2 2.7 5.9E-05 42.8 12.1 99 255-379 44-143 (495)
139 TIGR00895 2A0115 benzoate tran 91.0 1.2 2.6E-05 43.0 8.9 50 330-379 104-153 (398)
140 TIGR00900 2A0121 H+ Antiporter 91.0 2.5 5.3E-05 40.2 11.0 102 257-379 39-140 (365)
141 TIGR00924 yjdL_sub1_fam amino 90.7 0.2 4.2E-06 51.1 3.2 92 26-123 380-471 (475)
142 PRK10133 L-fucose transporter; 90.7 3.7 7.9E-05 41.3 12.3 95 262-379 71-165 (438)
143 PRK03893 putative sialic acid 90.6 3 6.6E-05 42.1 11.8 51 330-380 107-157 (496)
144 TIGR00886 2A0108 nitrite extru 90.6 3.6 7.8E-05 39.4 11.8 96 255-376 40-135 (366)
145 PRK11010 ampG muropeptide tran 90.5 6.4 0.00014 40.2 14.0 95 271-379 60-155 (491)
146 PRK10054 putative transporter; 90.4 3.1 6.7E-05 41.0 11.4 95 259-379 50-144 (395)
147 PF11700 ATG22: Vacuole efflux 90.4 23 0.0005 36.2 21.8 44 331-376 382-425 (477)
148 KOG3626 Organic anion transpor 90.0 2.4 5.1E-05 45.3 10.4 91 28-124 238-347 (735)
149 COG2211 MelB Na+/melibiose sym 89.7 20 0.00044 36.5 16.4 60 28-92 113-172 (467)
150 COG2807 CynX Cyanate permease 89.7 22 0.00048 35.0 16.9 86 26-118 98-184 (395)
151 PRK10077 xylE D-xylose transpo 89.3 1.9 4.1E-05 43.3 9.0 49 331-379 120-168 (479)
152 COG2223 NarK Nitrate/nitrite t 89.2 17 0.00036 36.3 15.0 79 36-122 114-195 (417)
153 PRK10504 putative transporter; 89.1 3.8 8.3E-05 41.1 11.1 50 330-379 97-146 (471)
154 PRK03699 putative transporter; 89.0 4.2 9.2E-05 39.8 11.1 49 330-378 94-142 (394)
155 KOG3764 Vesicular amine transp 89.0 1.8 3.9E-05 42.9 8.0 71 295-380 138-209 (464)
156 TIGR00887 2A0109 phosphate:H+ 88.7 5.8 0.00013 40.4 12.2 50 330-379 114-163 (502)
157 KOG2615 Permease of the major 88.5 3.2 7E-05 41.0 9.3 45 334-378 355-399 (451)
158 PRK15402 multidrug efflux syst 88.5 7 0.00015 38.3 12.2 46 330-375 100-145 (406)
159 PRK09669 putative symporter Ya 88.4 0.6 1.3E-05 46.8 4.6 72 27-98 319-391 (444)
160 TIGR00881 2A0104 phosphoglycer 88.3 0.64 1.4E-05 44.5 4.6 69 296-379 63-131 (379)
161 TIGR00894 2A0114euk Na(+)-depe 88.1 1.8 3.8E-05 43.6 7.8 51 330-380 130-180 (465)
162 KOG2533 Permease of the major 88.0 0.52 1.1E-05 48.3 3.8 79 34-118 141-226 (495)
163 TIGR00792 gph sugar (Glycoside 87.6 0.73 1.6E-05 45.7 4.7 90 28-117 312-417 (437)
164 PRK10473 multidrug efflux syst 87.0 6.7 0.00014 38.2 11.0 50 330-379 90-139 (392)
165 TIGR00897 2A0118 polyol permea 85.7 1.2 2.5E-05 44.0 4.9 50 67-116 348-397 (402)
166 PRK15403 multidrug efflux syst 85.6 4.5 9.7E-05 40.2 9.0 50 330-379 103-152 (413)
167 PRK11902 ampG muropeptide tran 85.4 7.2 0.00016 38.3 10.4 95 271-379 47-142 (402)
168 PRK10642 proline/glycine betai 85.2 4.8 0.0001 40.9 9.2 92 270-378 71-165 (490)
169 TIGR00898 2A0119 cation transp 85.1 2.6 5.7E-05 42.7 7.3 50 330-379 179-228 (505)
170 TIGR00901 2A0125 AmpG-related 85.0 8.5 0.00018 36.9 10.5 51 329-379 81-131 (356)
171 KOG0255 Synaptic vesicle trans 85.0 48 0.001 33.8 18.6 81 26-115 170-250 (521)
172 TIGR00805 oat sodium-independe 84.8 4.3 9.3E-05 43.1 8.8 114 256-380 72-221 (633)
173 TIGR00883 2A0106 metabolite-pr 84.8 0.43 9.2E-06 46.0 1.2 76 28-109 313-390 (394)
174 TIGR00712 glpT glycerol-3-phos 84.7 8 0.00017 38.6 10.5 73 296-379 94-166 (438)
175 PRK11102 bicyclomycin/multidru 83.7 7.7 0.00017 37.4 9.6 69 296-379 59-127 (377)
176 PRK09952 shikimate transporter 83.6 1.6 3.5E-05 43.7 4.9 81 33-119 349-432 (438)
177 PRK10406 alpha-ketoglutarate t 83.6 4.7 0.0001 40.2 8.2 96 270-379 77-172 (432)
178 TIGR02718 sider_RhtX_FptX side 83.4 1.4 3E-05 43.2 4.2 48 67-114 338-385 (390)
179 PF11700 ATG22: Vacuole efflux 83.0 1.8 3.9E-05 44.2 4.9 86 27-118 380-466 (477)
180 PRK08633 2-acyl-glycerophospho 82.9 5.6 0.00012 44.8 9.4 51 330-380 102-152 (1146)
181 TIGR00882 2A0105 oligosacchari 81.3 1.3 2.8E-05 43.5 3.0 46 69-114 343-389 (396)
182 TIGR00902 2A0127 phenyl propri 81.2 2.1 4.5E-05 41.9 4.5 81 28-116 294-375 (382)
183 KOG2533 Permease of the major 81.0 41 0.00089 34.6 13.9 50 331-380 134-183 (495)
184 PF03825 Nuc_H_symport: Nucleo 80.5 45 0.00098 33.1 13.8 46 334-379 304-350 (400)
185 PRK15034 nitrate/nitrite trans 80.1 47 0.001 33.8 13.9 102 253-373 68-169 (462)
186 TIGR00903 2A0129 major facilit 80.0 14 0.00029 36.3 9.8 50 330-380 78-127 (368)
187 PRK11195 lysophospholipid tran 79.6 8.4 0.00018 37.9 8.3 96 255-379 41-136 (393)
188 TIGR01301 GPH_sucrose GPH fami 79.6 8.2 0.00018 39.5 8.3 49 332-380 115-165 (477)
189 TIGR00806 rfc RFC reduced fola 79.4 33 0.00071 35.3 12.3 50 330-380 114-163 (511)
190 PF01891 CbiM: Cobalt uptake s 79.2 28 0.00061 31.1 10.8 95 261-362 108-204 (205)
191 PLN00028 nitrate transmembrane 78.7 3.2 7E-05 42.1 5.1 53 67-120 381-433 (476)
192 PRK09848 glucuronide transport 77.3 2.7 5.9E-05 42.1 4.1 90 27-116 319-424 (448)
193 PF05977 MFS_3: Transmembrane 76.8 2.3 4.9E-05 44.0 3.4 54 66-119 340-393 (524)
194 PRK11043 putative transporter; 76.3 35 0.00075 33.3 11.6 45 330-374 93-137 (401)
195 TIGR01272 gluP glucose/galacto 75.9 1.6 3.6E-05 41.6 1.9 72 32-111 235-306 (310)
196 COG2814 AraJ Arabinose efflux 75.0 7.8 0.00017 38.5 6.4 58 67-124 333-390 (394)
197 COG0738 FucP Fucose permease [ 74.7 6.2 0.00013 39.2 5.5 63 26-94 103-165 (422)
198 PF03137 OATP: Organic Anion T 74.6 0.88 1.9E-05 47.2 -0.3 91 27-123 141-253 (539)
199 PRK11652 emrD multidrug resist 74.2 7.8 0.00017 37.8 6.3 80 28-114 300-379 (394)
200 PTZ00207 hypothetical protein; 72.4 84 0.0018 33.1 13.6 76 295-380 93-168 (591)
201 PF13347 MFS_2: MFS/sugar tran 71.6 7.6 0.00016 38.6 5.6 73 25-97 313-386 (428)
202 PRK15075 citrate-proton sympor 71.6 4.6 0.0001 40.2 4.1 59 35-99 339-398 (434)
203 KOG2504 Monocarboxylate transp 71.4 3.3 7E-05 42.7 2.9 80 35-120 396-476 (509)
204 KOG0569 Permease of the major 70.1 1.4E+02 0.0029 30.8 16.0 86 27-118 116-203 (485)
205 KOG3762 Predicted transporter 69.3 38 0.00083 35.2 9.8 67 293-374 436-502 (618)
206 KOG4686 Predicted sugar transp 69.1 12 0.00027 35.8 5.8 81 31-117 356-439 (459)
207 PRK11128 putative 3-phenylprop 68.8 6 0.00013 38.6 4.1 78 27-112 293-371 (382)
208 TIGR00896 CynX cyanate transpo 68.5 29 0.00063 33.2 8.8 96 256-379 39-134 (355)
209 PRK10429 melibiose:sodium symp 68.0 6.2 0.00013 40.0 4.1 71 28-98 325-396 (473)
210 PRK06814 acylglycerophosphoeth 67.8 6.6 0.00014 44.5 4.7 77 26-108 333-410 (1140)
211 PF03209 PUCC: PUCC protein; 67.6 1E+02 0.0022 30.8 12.3 79 296-376 53-134 (403)
212 PRK07331 cobalt transport prot 66.1 70 0.0015 31.0 10.6 99 261-364 109-220 (322)
213 PF14007 YtpI: YtpI-like prote 64.6 7.5 0.00016 30.0 3.0 69 54-128 18-86 (89)
214 KOG0254 Predicted transporter 63.3 22 0.00048 36.4 7.2 82 26-113 141-223 (513)
215 PRK09584 tppB putative tripept 61.8 6.2 0.00014 40.4 2.8 91 27-123 382-482 (500)
216 TIGR00806 rfc RFC reduced fola 59.4 11 0.00024 38.5 4.0 81 26-114 114-197 (511)
217 PRK08319 cobalt transport prot 56.5 1.6E+02 0.0034 26.8 11.0 32 335-366 183-214 (224)
218 TIGR00123 cbiM cobalamin biosy 56.2 1.2E+02 0.0026 27.5 9.8 33 332-364 180-212 (214)
219 KOG0254 Predicted transporter 55.9 44 0.00094 34.2 7.8 94 25-119 43-139 (513)
220 COG2271 UhpC Sugar phosphate p 54.2 1.3E+02 0.0028 30.4 10.3 75 291-380 92-166 (448)
221 PF03825 Nuc_H_symport: Nucleo 53.9 17 0.00037 36.2 4.3 77 38-120 312-395 (400)
222 PRK06265 cobalt transport prot 50.4 1.8E+02 0.004 25.8 10.4 69 294-365 128-198 (199)
223 PF05978 UNC-93: Ion channel r 49.5 1.7E+02 0.0036 25.0 10.0 48 330-377 88-135 (156)
224 KOG2532 Permease of the major 49.4 40 0.00088 34.3 6.2 73 294-379 104-176 (466)
225 PRK11462 putative transporter; 48.1 21 0.00046 36.0 4.0 62 31-92 322-384 (460)
226 KOG0252 Inorganic phosphate tr 46.2 24 0.00053 35.9 3.9 88 34-123 41-136 (538)
227 KOG3574 Acetyl-CoA transporter 45.5 1.9E+02 0.0042 29.0 9.7 53 327-379 364-417 (510)
228 KOG2816 Predicted transporter 42.9 1.6E+02 0.0036 29.9 9.4 50 67-116 146-195 (463)
229 KOG2325 Predicted transporter/ 42.7 74 0.0016 32.7 6.8 93 260-372 79-172 (488)
230 PRK10207 dipeptide/tripeptide 41.1 22 0.00047 36.4 2.8 91 27-123 379-479 (489)
231 TIGR00769 AAA ADP/ATP carrier 41.0 41 0.0009 34.3 4.8 38 50-93 152-189 (472)
232 PRK11909 cobalt transport prot 37.4 3.3E+02 0.0071 24.9 10.1 36 330-365 182-218 (230)
233 PTZ00207 hypothetical protein; 36.8 39 0.00085 35.6 3.9 84 26-118 119-204 (591)
234 TIGR00769 AAA ADP/ATP carrier 31.6 43 0.00094 34.2 3.2 58 49-111 288-345 (472)
235 KOG2504 Monocarboxylate transp 30.2 6.3E+02 0.014 26.1 15.2 86 26-118 133-219 (509)
236 PF00083 Sugar_tr: Sugar (and 27.6 19 0.00042 35.7 -0.1 66 43-114 365-430 (451)
237 PF01307 Plant_vir_prot: Plant 23.8 67 0.0015 25.6 2.3 29 97-125 6-34 (104)
238 TIGR00788 fbt folate/biopterin 22.3 94 0.002 31.5 3.7 38 67-104 385-427 (468)
239 PF12650 DUF3784: Domain of un 21.9 2.1E+02 0.0046 22.0 4.9 19 68-86 43-61 (97)
240 PF05631 DUF791: Protein of un 21.8 1.2E+02 0.0026 29.7 4.1 97 24-121 118-217 (354)
241 PF11027 DUF2615: Protein of u 21.5 1.2E+02 0.0026 24.1 3.3 27 100-126 54-80 (103)
242 COG2211 MelB Na+/melibiose sym 21.3 1.5E+02 0.0034 30.2 4.9 68 25-92 325-393 (467)
243 PF00083 Sugar_tr: Sugar (and 21.1 6.7 0.00014 39.0 -4.9 80 26-111 101-183 (451)
244 KOG3626 Organic anion transpor 21.0 1.9E+02 0.004 31.4 5.6 87 293-379 162-285 (735)
245 KOG0637 Sucrose transporter an 20.5 6.8E+02 0.015 25.7 9.1 155 210-380 32-192 (498)
246 COG0477 ProP Permeases of the 20.4 1.3E+02 0.0029 26.5 4.0 77 28-109 95-174 (338)
247 PF12670 DUF3792: Protein of u 20.3 2.2E+02 0.0047 22.9 4.8 49 68-116 36-85 (116)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-73 Score=580.29 Aligned_cols=374 Identities=43% Similarity=0.717 Sum_probs=342.5
Q ss_pred EEEEeecCCCCCCCC----CCCCCcc--cchhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHH
Q 016875 2 LTIQAYSKSLHPPDC----GKSSCLK--GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 75 (381)
Q Consensus 2 l~~~~~~~~l~p~~c----~~~~c~~--~~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY 75 (381)
||+++.+|+|+|++| +++.|.+ +.+...+|.+|.++++|+|+.|||+.++++||||+.++++++.+.++|+|||
T Consensus 121 lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~y 200 (571)
T KOG1237|consen 121 LTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFY 200 (571)
T ss_pred HHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHH
Confidence 678999999999997 3336887 6799999999999999999999999999999999999988888999999999
Q ss_pred HHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHHhhcccceeecCCCCCchhhHHHHHHHHHHhccccCCCCc
Q 016875 76 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNP 155 (381)
Q Consensus 76 ~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f~~g~~~y~~~~p~g~pl~~~~~vl~~a~~~~~~~~~~~~ 155 (381)
+.+|+|++++.++..|+|++.||.+||+++++.|++++++|+.|++.|++++|.|+|++++.+|++++.++++...+.++
T Consensus 201 f~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~ 280 (571)
T KOG1237|consen 201 FSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFKRKAVVSLDP 280 (571)
T ss_pred HHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHHHhccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877664
Q ss_pred chhhhhhhhcccCCccccCCCCccchhhhhccCCCCC----CCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhh
Q 016875 156 EELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDS----TAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQ 231 (381)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~a~~~~~~~----~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q 231 (381)
+.. +. .........+++.++++|+|+.+...+ ...+||++|+++||||+|.++|++|+|...++||+++.|
T Consensus 281 ~~~-~~----~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~i~~~~~~aq 355 (571)
T KOG1237|consen 281 EEL-YY----DCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTTIIYSTVYAQ 355 (571)
T ss_pred hhc-cc----cccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHHHHHHHHHHh
Confidence 333 11 111123345678899999999876542 245789999999999999999999999999999999999
Q ss_pred hhhhHHHHhhccCCCcCC-ccccCCcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHH
Q 016875 232 LQTLSVTQGAYMDPRLGS-IKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIA 310 (381)
Q Consensus 232 ~~t~~~~qa~~~d~~i~g-~~ip~~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~ 310 (381)
+.|.+++|+.+|||++++ +++|+++++.+..+.+++++|+||++++|+.||.+++|+++++++|||+|++++.++|.++
T Consensus 356 ~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~~si~sm~~a 435 (571)
T KOG1237|consen 356 MVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLVLSILSMAVA 435 (571)
T ss_pred hhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccchHHHHHHHHH
Confidence 999999999999999997 9999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHhhhccC--CCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 311 GFVEVKRRNAFNQ--SPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 311 ~~~e~~~~~~~~~--~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+++|.+|++.+.+ +..++||++||+|||+|+|++|+|.+++++||+|+|+|++|||+++++|+++.|+||
T Consensus 436 a~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~ 507 (571)
T KOG1237|consen 436 GIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGN 507 (571)
T ss_pred HHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999988764 122689999999999999999999999999999999999999999999999999997
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-56 Score=436.93 Aligned_cols=317 Identities=18% Similarity=0.303 Sum_probs=253.0
Q ss_pred chhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHH
Q 016875 25 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLI 104 (381)
Q Consensus 25 ~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i 104 (381)
.....+|+||.+|++|+|++|||+++++||||+++||| ||.+|+.||+++|+|++++|++++|+++++||+.+|++
T Consensus 115 ~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~ 190 (498)
T COG3104 115 SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGL 190 (498)
T ss_pred ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 35679999999999999999999999999999999995 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccceeecC--CCCCchhhH------HHHHHHHHHhc-cccCCCCcchhhhh--hhhcccCCcccc
Q 016875 105 SSVATLIGLIALAIGKPFYRIQQ--PGESPLVRV------AQVIVVAIKNR-KLSLPDNPEELYEI--NKIERVGTEERI 173 (381)
Q Consensus 105 ~~i~m~~~l~~f~~g~~~y~~~~--p~g~pl~~~------~~vl~~a~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~ 173 (381)
++++|.+++++|++++|++...+ |+.+|++.- ..+++.....- ..... ...+.. ..++ +
T Consensus 191 aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~-------i 260 (498)
T COG3104 191 AAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLN---QNTFSGVLLVIS-------I 260 (498)
T ss_pred HHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-------H
Confidence 99999999999999999987753 444444321 11111111000 00000 000000 0000 0
Q ss_pred CCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhh-ccCCCcCCccc
Q 016875 174 PHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGA-YMDPRLGSIKV 252 (381)
Q Consensus 174 ~~~~~~~~L~~a~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~-~~d~~i~g~~i 252 (381)
... .-.+.++ ..| .+.+ |||||+++++|+++..++||++|+|++|+++.|++ ++||+++|+++
T Consensus 261 ~~~--~~~~~~~----------~~~---~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~v 324 (498)
T COG3104 261 LIA--IIYFAEA----------FRS---PKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEV 324 (498)
T ss_pred HHH--HHHHHHH----------hcc---CccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceec
Confidence 000 0000000 011 2334 99999999999999999999999999999999996 68999778999
Q ss_pred cCCcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHH
Q 016875 253 PTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLF 332 (381)
Q Consensus 253 p~~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~ 332 (381)
||+|+|++||++|++++|+++++|+|+.++. + +|++..||++|++++++++++........ ..+. ..+|++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~-~---~ps~~~KFalGl~l~g~~fl~l~~~~~~~---~~~~--~~~s~~ 395 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGN-K---QPSTPIKFALGLILAGLGFLILLLAGIWF---GGPS--GLVSVW 395 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC-C---CCCcchHHHHHHHHHHHHHHHHHHHHHhh---cCCC--CCcCHH
Confidence 9999999999999999999999999987665 2 69999999999999999999887775321 2212 479999
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 333 WLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 333 wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
|++++|+++++||+|+||+|+|+++++||++|+|.+||.|++++++|+
T Consensus 396 ~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~ 443 (498)
T COG3104 396 WLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQ 443 (498)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999886
No 3
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=100.00 E-value=8.1e-53 Score=413.98 Aligned_cols=338 Identities=28% Similarity=0.463 Sum_probs=243.2
Q ss_pred cchhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHH
Q 016875 24 GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFL 103 (381)
Q Consensus 24 ~~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~ 103 (381)
+.+.+.+|+||+++++|+|++|||++++++|||+++++ +++|++|+||||++|+|++++.++++|+|+++||+++|+
T Consensus 30 ~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~---~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~ 106 (372)
T PF00854_consen 30 GIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD---SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFG 106 (372)
T ss_dssp ----CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT---THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHH
T ss_pred hHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch---hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhh
Confidence 44578999999999999999999999999999998752 369999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccceeec-CCCCCchhh-HHHHHHHHHHhccccCCCCcchhhhhhhhcccCCccccCCCCccch
Q 016875 104 ISSVATLIGLIALAIGKPFYRIQ-QPGESPLVR-VAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRC 181 (381)
Q Consensus 104 i~~i~m~~~l~~f~~g~~~y~~~-~p~g~pl~~-~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (381)
+|+++|++++++|+.++++|++. +|.++++.+ ...+..++.+++....+.....+++....... ... .+....
T Consensus 107 i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~ 181 (372)
T PF00854_consen 107 IPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVAAFKKRKLAVPKGSSWLDWALFQYSE---RSI--FGIIVF 181 (372)
T ss_dssp HHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHHHHHHHCCCH-HHHHHHHHHHHHHCC---CCC--CCCCCH
T ss_pred HHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHHHHHHhhcccccchHHHHHhhhhhhh---hhh--hhhhhh
Confidence 99999999999999999999998 788999888 55566666666655444221122221110000 000 011111
Q ss_pred hhhhccCCCCCCCCCCcc-cccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhhccCCCcCC-ccccCCcccc
Q 016875 182 LDKAAIVPKDSTAAAPWR-VCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGS-IKVPTPSIPV 259 (381)
Q Consensus 182 L~~a~~~~~~~~~~~~~~-~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~~~d~~i~g-~~ip~~~~~~ 259 (381)
.+.+..... . ...|+ .++++++|+.|.+.+.+|.+...++|+..+.|..+....|++++|+.+++ +++|++++|+
T Consensus 182 ~~~~~~~~~-~--~~~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~ 258 (372)
T PF00854_consen 182 IRAAVIFFP-E--IFFWALFCQVQRVEELKALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQS 258 (372)
T ss_dssp HHHHHHHCC-C--HHHHTTTSSTTTHHHCCHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTT
T ss_pred ccchhhhhh-h--hhhcccCCccceeeeeeeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhh
Confidence 111111000 0 00111 15678899999999999999999999999999999999999999999998 9999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHH
Q 016875 260 LPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYC 339 (381)
Q Consensus 260 ~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~ 339 (381)
+|++++++++|++|++++|++| +++ ++++++|+++|++++.+++++++.+|.+|....++++ .++.+|++|+|+
T Consensus 259 ~n~i~iii~~pi~~~~~~p~~~-~~~---~~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~--~~~~~~~~~~~~ 332 (372)
T PF00854_consen 259 FNPIFIIIFIPILDRVVYPLLR-RGI---QPSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCG--KVSPWWQVPMYI 332 (372)
T ss_dssp HHHHHCHHHHHHHHHHCCCTTT-T---------HHHHHHH-HHHHHHHHTTTHHHH---HH----T--T--THHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHhh-hcc---cchhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccC--CCChhhHHHHHH
Confidence 9999999999999999999987 332 6899999999999999999999999988776666543 677799999999
Q ss_pred HHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhc
Q 016875 340 IFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHL 378 (381)
Q Consensus 340 l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~ 378 (381)
+.+++|++++++|+|..++.+|+++++.|||+|++..++
T Consensus 333 ~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~~~ 371 (372)
T PF00854_consen 333 FWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALSAF 371 (372)
T ss_dssp HHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH--
T ss_pred HHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHhcc
Confidence 999999999999999888888888888888888877654
No 4
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=9.5e-50 Score=414.03 Aligned_cols=252 Identities=22% Similarity=0.375 Sum_probs=222.4
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecc-------cch
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-------GWW 99 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~-------g~~ 99 (381)
...+++||+++++|+|++|||++++++|||+++++ ++++++|+|||+++|+|+++++++++++++++ ||+
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~ 161 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYP 161 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchH
Confidence 45688999999999999999999999999987554 36999999999999999999999999998554 799
Q ss_pred hHHHHHHHHHHHHHHHHhhcccceeecCCCCCchhhHHHHHHHHHHhccccCCCCcchhhhhhhhcccCCccccCCCCcc
Q 016875 100 LGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQF 179 (381)
Q Consensus 100 ~~F~i~~i~m~~~l~~f~~g~~~y~~~~p~g~pl~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (381)
++|++|+++|++++++|..++|+|++.+|.++++.++.++++.+.+++....+. ....
T Consensus 162 ~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~----------------------~~~~ 219 (654)
T TIGR00926 162 LAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE----------------------HWPL 219 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc----------------------ccch
Confidence 999999999999999999999999988999999999999988888764321110 0113
Q ss_pred chhhhhccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhhccCCCcCCccccCCcccc
Q 016875 180 RCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPV 259 (381)
Q Consensus 180 ~~L~~a~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~~~d~~i~g~~ip~~~~~~ 259 (381)
+|+|+++... .++++||+|++++++++++..++||.+++|+.|++++|+++||++++++++|++++|+
T Consensus 220 ~~ld~a~~~~------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~g~~ip~~~lq~ 287 (654)
T TIGR00926 220 HWLDYAKDKH------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDVGGFEIQPDQMQV 287 (654)
T ss_pred hHHHHhcccc------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCccCCEecCHHHHHH
Confidence 6788776432 3567999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHh
Q 016875 260 LPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRR 318 (381)
Q Consensus 260 ~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~ 318 (381)
+|++.+++++|++++.++|.++|++. ++++++|+++|++++++++++++++|.++.
T Consensus 288 ~n~L~IIil~Pi~~~~lyp~l~~~~~---~ls~l~k~~iG~~la~la~~va~~ve~~~~ 343 (654)
T TIGR00926 288 VNPLLILIFVPIFDYIVYPAIAKCGT---RFTSLRKMAVGGLLAALSFFVAALVQLKVN 343 (654)
T ss_pred HHHHHHHHhHHHHHHhHHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988764 489999999999999999999999996555
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=1.9e-44 Score=363.31 Aligned_cols=312 Identities=15% Similarity=0.163 Sum_probs=238.9
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 107 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i 107 (381)
..+++++.++++|+|++|||.+++++|+|+++|++ |+++|+++|+++|+|+++++++++++++++||+++|.++++
T Consensus 101 ~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 101 SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV 176 (493)
T ss_pred hHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH
Confidence 45778888999999999999999999999987764 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccceeecCC-CCCchhh--HHHHH-----HHH-----HHhccccCCCCcchhhhhhhhcccCCccccC
Q 016875 108 ATLIGLIALAIGKPFYRIQQP-GESPLVR--VAQVI-----VVA-----IKNRKLSLPDNPEELYEINKIERVGTEERIP 174 (381)
Q Consensus 108 ~m~~~l~~f~~g~~~y~~~~p-~g~pl~~--~~~vl-----~~a-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (381)
+|++++++|+.++|.+.+..+ +.+|.++ ..+.+ ... ......... ....+... . . ...
T Consensus 177 gm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~----~--~~~ 247 (493)
T PRK15462 177 GMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKE-WSVYALIV--A----T--IIG 247 (493)
T ss_pred HHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--H----H--HHH
Confidence 999999999999887755311 1233311 00000 000 000000000 00000000 0 0 000
Q ss_pred CCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhh-ccCCCcCCcccc
Q 016875 175 HTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGA-YMDPRLGSIKVP 253 (381)
Q Consensus 175 ~~~~~~~L~~a~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~-~~d~~i~g~~ip 253 (381)
.-++-+ . . + ...+.|||||+..++++++..++||+.|+|++|+++++++ ++||+++||++|
T Consensus 248 ----~~~~~~--~-~---------~--~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip 309 (493)
T PRK15462 248 ----LGVLAK--I-Y---------R--KAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVP 309 (493)
T ss_pred ----HHHHHH--H-H---------H--hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeC
Confidence 000000 0 0 0 0123488999999999999999999999999999999996 699999999999
Q ss_pred CCcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHH
Q 016875 254 TPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFW 333 (381)
Q Consensus 254 ~~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~w 333 (381)
++|+|++||++|+++.|++.++|..+.+| +++|+.++|+++|+++.+++++++.+... ...+++ .+|++|
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~----~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~----~~~~~~--~~s~~w 379 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAG----NRTVRIWGKFALGLGLMSAGFCILTLSAR----WSAMYG--HSSLPL 379 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcC----CCCCCcHHHHHHHHHHHHHHHHHHHHHHh----hcCCCC--CcCHHH
Confidence 99999999999999999999988544322 23689999999999999999998887652 122232 699999
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHh-hccC
Q 016875 334 LSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHC-HLAT 380 (381)
Q Consensus 334 lv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~-a~G~ 380 (381)
++..|+++++||+|.+|+|+++++|.||++++|++||+|++.. ++|+
T Consensus 380 l~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~ 427 (493)
T PRK15462 380 MVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIAN 427 (493)
T ss_pred HHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999954 5664
No 6
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=5.9e-38 Score=318.78 Aligned_cols=312 Identities=11% Similarity=0.172 Sum_probs=236.3
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 107 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i 107 (381)
..+++++.++++|+|++|||..++++|||+++|+ +|++.|+++|+++|+|+++++.+++++.+++||+++|.++++
T Consensus 106 ~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 106 DLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred hHHHHHHHHHHhccccccCCHHHHHHHhcCCCch----hhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 3567899999999999999999999999987664 378899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccceeec--CCCCCchh--hHHHHH------HHHHHhccccCCCCcchhhhhhhhcccCCccccCCCC
Q 016875 108 ATLIGLIALAIGKPFYRIQ--QPGESPLV--RVAQVI------VVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTN 177 (381)
Q Consensus 108 ~m~~~l~~f~~g~~~y~~~--~p~g~pl~--~~~~vl------~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (381)
++.++++.+..+++++++. +|++++.. ....+. ....... .+.. +...... ...+ .+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~-~~~~-~~~~~~~-~~~~------~i~--- 249 (489)
T PRK10207 182 GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWL-MHNV-EVANLVL-IVLS------IVV--- 249 (489)
T ss_pred HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHH-Hhhh-hHHHHHH-HHHH------HHH---
Confidence 9999999999998877653 34344331 111100 0000000 0000 0000000 0000 000
Q ss_pred ccchhhhhccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhh-ccCCCcCCccccCCc
Q 016875 178 QFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGA-YMDPRLGSIKVPTPS 256 (381)
Q Consensus 178 ~~~~L~~a~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~-~~d~~i~g~~ip~~~ 256 (381)
...++.+. ...+ .+++++.+..+++++..++||.+++|+.+++.+|++ ++|+++.|+++|+++
T Consensus 250 ~~~f~~~~---------------~~~~-~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~ 313 (489)
T PRK10207 250 TIIFFREA---------------FKLD-KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVS 313 (489)
T ss_pred HHHHHHHH---------------hcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHH
Confidence 00001100 1112 356788888899999999999999999999999997 689988899999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHH
Q 016875 257 IPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSF 336 (381)
Q Consensus 257 ~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~ 336 (381)
+|++|+++++++.|+.++++ +.++| ++.++++++|+++|+++++++++++++.+... ...+ ..+|+||+++
T Consensus 314 ~~~~n~~~iii~~pl~~~l~-~rl~~---r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~---~~~~--~~~s~~~~i~ 384 (489)
T PRK10207 314 FQALNPFWVVVASPILAGIY-THLGS---KGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWF---ADAQ--GLTSPWFIVL 384 (489)
T ss_pred HHhHhHHHHHHHHHHHHHHH-HHHhh---CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhh---cCCC--CccCHHHHHH
Confidence 99999999999999999755 33333 33468999999999999999998877665321 2222 2588999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 337 QYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 337 ~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
.|+++|+||+|.+|+++|++++.+|++++|++||+|+++.++|+
T Consensus 385 ~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~ 428 (489)
T PRK10207 385 VYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAF 428 (489)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998875
No 7
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=3.9e-37 Score=311.98 Aligned_cols=317 Identities=13% Similarity=0.166 Sum_probs=237.6
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
...+++++.++++|+|+++||..++++|++++++++ +|++.|+++|+++|+|+++++.+.+++.+++||+++|.+++
T Consensus 102 ~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~ 178 (475)
T TIGR00924 102 PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAA 178 (475)
T ss_pred HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 456788999999999999999999999999876632 47889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccceeecCCCCCchhhH-----H--HHH----HHHHHhccccCCCCcchhhhhhhhcccCCccccCC
Q 016875 107 VATLIGLIALAIGKPFYRIQQPGESPLVRV-----A--QVI----VVAIKNRKLSLPDNPEELYEINKIERVGTEERIPH 175 (381)
Q Consensus 107 i~m~~~l~~f~~g~~~y~~~~p~g~pl~~~-----~--~vl----~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (381)
+.+++++++++.+++.+++.++++++.... . +.+ ....+............. ..+
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~ 244 (475)
T TIGR00924 179 VGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANI--------------LLM 244 (475)
T ss_pred HHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHH--------------HHH
Confidence 999999999999988887655444433210 0 000 000000000000000000 000
Q ss_pred CCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHh-hccCCCcCCccccC
Q 016875 176 TNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQG-AYMDPRLGSIKVPT 254 (381)
Q Consensus 176 ~~~~~~L~~a~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa-~~~d~~i~g~~ip~ 254 (381)
. ...+..++.......| +.++ +|+++..+++++++..++||++|+|+.+++.+|+ +++|++++++++|+
T Consensus 245 ~-----~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~ 314 (475)
T TIGR00924 245 T-----VTLAVIIFFFRLAFKP----RLDA-VARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPV 314 (475)
T ss_pred H-----HHHHHHHHHHHHHHhc----cCCH-HHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECH
Confidence 0 0000000000000001 1223 4556667799999999999999999999988776 56999999999999
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHH
Q 016875 255 PSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWL 334 (381)
Q Consensus 255 ~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wl 334 (381)
++++++|+++++++.|+++++|.++ +|+++ ++++..|+++|+++.+++++.++++.. ..+++ .++|+||+
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l-~~~~~---~~~~~~k~~~G~~l~~~~~~~~~~~~~----~~~~~--~~~s~~~~ 384 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRL-GRKGK---DPTTPLKFTLGMLFCGASFLTFAASIW----FADAG--GLTSPWFM 384 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHH-HhCCC---CCCcHHHHHHHHHHHHHHHHHHHHHHh----hcCCC--CccCHHHH
Confidence 9999999999999999999866444 33333 578889999999999999999887731 23332 47999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 335 SFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 335 v~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+++|++.++||++.+|+++|++++++|+++||.++|+|.+..++|+
T Consensus 385 i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~ 430 (475)
T TIGR00924 385 VLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGS 430 (475)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998875
No 8
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=7.8e-36 Score=304.29 Aligned_cols=310 Identities=15% Similarity=0.219 Sum_probs=234.6
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
...+++++.+.++|.|+++|+..++++|+|+++++ ++++.++++|+++|+|+++++++.+++.+++||+++|.+++
T Consensus 112 ~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~----~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~ 187 (500)
T PRK09584 112 AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP----RLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSV 187 (500)
T ss_pred HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----hhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 35677888999999999999999999999987654 36789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccceeec--CCCCCchhhH------HHHHHHHH-HhccccCCCCcchhhhhhhhcccCCccccCCCC
Q 016875 107 VATLIGLIALAIGKPFYRIQ--QPGESPLVRV------AQVIVVAI-KNRKLSLPDNPEELYEINKIERVGTEERIPHTN 177 (381)
Q Consensus 107 i~m~~~l~~f~~g~~~y~~~--~p~g~pl~~~------~~vl~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (381)
+.++++++.++..++.+++. +|+++|.... ..+..... .......+. ..... +....
T Consensus 188 i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----------~~~~~ 253 (500)
T PRK09584 188 VGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQE----IARMA----------LGVVA 253 (500)
T ss_pred HHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcch----HHHHH----------HHHHH
Confidence 99999999988887766543 3433333211 11111111 100000000 00000 00000
Q ss_pred ccchhhhhccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhh-ccCCCcCCccccCCc
Q 016875 178 QFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGA-YMDPRLGSIKVPTPS 256 (381)
Q Consensus 178 ~~~~L~~a~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~-~~d~~i~g~~ip~~~ 256 (381)
.....+.... .+. .+.+|+++.+..+++++..++||++++|+++.++.|+. ++|++++|+.+|+++
T Consensus 254 ~~~~~~~~~~------------~~~-~~~~~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~ 320 (500)
T PRK09584 254 LGIVVIFGKE------------AFA-MKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQ 320 (500)
T ss_pred HHHHHHHHHH------------Hhh-cCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHH
Confidence 0000000000 011 22367788888899999999999999999999999996 589999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHH
Q 016875 257 IPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSF 336 (381)
Q Consensus 257 ~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~ 336 (381)
+|++|+++++++.|+.++++. |.+++ +++.+|+++|+++.++++++++.... .++++ ..+|++|+++
T Consensus 321 ~~s~n~i~iil~~p~~~~~~~----~l~~r---~~~~~~~~~G~~l~~l~f~~l~~~~~----~~~~~--~~vs~~~~~~ 387 (500)
T PRK09584 321 YQALNPFWIMIGSPILAAIYN----KMGDR---LPMPHKFAIGMVLCSGAFLVLPLGAK----FANDA--GIVSVNWLIA 387 (500)
T ss_pred HHHHhHHHHHHHHHHHHHHHH----HhCcC---CCcHHHHHHHHHHHHHHHHHHHHHHH----hcCCC--CccCHHHHHH
Confidence 999999999999999998763 33332 56889999999999999998877652 23333 4799999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 337 QYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 337 ~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+|+++|+||++++|+++|++++++|+++||.+||+|+++.++|+
T Consensus 388 ~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~ 431 (500)
T PRK09584 388 SYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAA 431 (500)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998875
No 9
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.14 E-value=5.1e-10 Score=117.34 Aligned_cols=253 Identities=11% Similarity=0.001 Sum_probs=194.1
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhH-----
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLG----- 101 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~----- 101 (381)
.....+++..++++.+|.+++.+++.++|.|..++ +++++.+++|||..+.+.+.+.+....+.....+..+
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~---~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~ 158 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE---RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQD 158 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcCc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCc
Confidence 35667788899999999999999999999998763 5566799999999999999765555444333334432
Q ss_pred --HHHHHHHHHHHHHHHhhcccceeecCCCCCchhhHHHHHHHHHHhccccCCCCcchhhhhhhhcccCCccccCCCCcc
Q 016875 102 --FLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQF 179 (381)
Q Consensus 102 --F~i~~i~m~~~l~~f~~g~~~y~~~~p~g~pl~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (381)
++..++.+++.++.++.+...+++.++.+.+...+.+++.......+. +..+
T Consensus 159 ~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~----------------------~~~~---- 212 (654)
T TIGR00926 159 CYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRK----------------------RFST---- 212 (654)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHH----------------------hhcc----
Confidence 347888899999999999888887777766555566665444332110 0000
Q ss_pred chhhhhccCCCCCCCCCCccc--ccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhhccCCCcCCccccCCcc
Q 016875 180 RCLDKAAIVPKDSTAAAPWRV--CTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSI 257 (381)
Q Consensus 180 ~~L~~a~~~~~~~~~~~~~~~--~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~~~d~~i~g~~ip~~~~ 257 (381)
.+.. ....|-. ....++++++...+++.++...+.+|+.+.|.....+.|+.++|+..+.+...+...
T Consensus 213 --~~~~--------~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~g~~ip~ 282 (654)
T TIGR00926 213 --RSEH--------WPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDVGGFEIQP 282 (654)
T ss_pred --CCcc--------cchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCccCCEecCH
Confidence 0000 0012211 233345789999999999999999999999999999999999999988777788889
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhc
Q 016875 258 PVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAF 321 (381)
Q Consensus 258 ~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~ 321 (381)
+.++++-.++++|+...+.+|+++++++ .-.+++++.-+.+..+++.+.+++++..+.+.-
T Consensus 283 ~~lq~~n~L~IIil~Pi~~~~lyp~l~~---~~~~ls~l~k~~iG~~la~la~~va~~ve~~~~ 343 (654)
T TIGR00926 283 DQMQVVNPLLILIFVPIFDYIVYPAIAK---CGTRFTSLRKMAVGGLLAALSFFVAALVQLKVN 343 (654)
T ss_pred HHHHHHHHHHHHHhHHHHHHhHHHHHHh---cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999864 446788999999999999999999998877666
No 10
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.81 E-value=2.4e-07 Score=89.23 Aligned_cols=86 Identities=10% Similarity=0.018 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.++++..+..+|.|...|...++..|.++++ +|.+.++++..+.++|.++++.+.+++.+..||++.|.+.
T Consensus 91 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 91 NIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE------QLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 5677788888899999999999999999988754 3788999999999999999999999998899999999988
Q ss_pred HHHHHHHHHHHh
Q 016875 106 SVATLIGLIALA 117 (381)
Q Consensus 106 ~i~m~~~l~~f~ 117 (381)
++..+++.+...
T Consensus 165 ~~~~~~~~~~~~ 176 (365)
T TIGR00900 165 AVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHH
Confidence 776666554433
No 11
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.77 E-value=6.9e-07 Score=86.78 Aligned_cols=83 Identities=13% Similarity=0.166 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeeccc--------chh
Q 016875 29 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG--------WWL 100 (381)
Q Consensus 29 ~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g--------~~~ 100 (381)
.++....+..++.+...+...+++.|.++++ +|.....+...+.++|.++++.+..++.++.| |+.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDE------ELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY 158 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence 3443334555666777788888899988543 36788899999999999999999888877777 999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 016875 101 GFLISSVATLIGLIALA 117 (381)
Q Consensus 101 ~F~i~~i~m~~~l~~f~ 117 (381)
.|.+.++..+++.++.+
T Consensus 159 ~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 159 IFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998887766555433
No 12
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.77 E-value=1.2e-07 Score=91.10 Aligned_cols=83 Identities=23% Similarity=0.288 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
.+.++++..+..+|.|...+...++..|.+++++ |...++++..+.++|..+++.+.+++.++.||++.|.+.+
T Consensus 85 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~ 158 (352)
T PF07690_consen 85 FWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISA 158 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHH
T ss_pred HHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhhhhhcccchhhhhhhcccccccccccc
Confidence 4577888889999999999999999999998744 7889999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 016875 107 VATLIGLIA 115 (381)
Q Consensus 107 i~m~~~l~~ 115 (381)
+..+++.++
T Consensus 159 ~~~~~~~il 167 (352)
T PF07690_consen 159 ILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHH
T ss_pred chhhhhhhh
Confidence 888887664
No 13
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.60 E-value=1.1e-06 Score=87.45 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=67.5
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.++++..+..+|.|.+.|...+...|.++++ ++....++++...++|..+++.+.+++. ++||++.|.+.
T Consensus 98 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~ 170 (400)
T PRK11646 98 EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPH------QRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATG 170 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 4566777777888888888899888888877542 3788999999999999999999999998 78999999987
Q ss_pred HHHHHHHHHH
Q 016875 106 SVATLIGLIA 115 (381)
Q Consensus 106 ~i~m~~~l~~ 115 (381)
++..++..+.
T Consensus 171 ~~~~~~~~i~ 180 (400)
T PRK11646 171 AVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHH
Confidence 7666555443
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.60 E-value=2.6e-06 Score=82.51 Aligned_cols=85 Identities=18% Similarity=0.178 Sum_probs=70.7
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.++++..+..+|.|..-+...++..|.++++ +|...+.++....++|.++++.+.+++.++.||++.|.+.
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 154 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPAS------ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIE 154 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHH------HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence 4667778888899999999999999999888642 3788999999999999999999999988899999999987
Q ss_pred HHHHHHHHHHH
Q 016875 106 SVATLIGLIAL 116 (381)
Q Consensus 106 ~i~m~~~l~~f 116 (381)
++..++..+..
T Consensus 155 ~~~~~~~~~~~ 165 (399)
T TIGR00893 155 GVLGIIWGVLW 165 (399)
T ss_pred HHHHHHHHHHh
Confidence 76655544433
No 15
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.56 E-value=3.9e-06 Score=85.80 Aligned_cols=85 Identities=15% Similarity=0.073 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.+.++-.+..+|.|++-|.....+.+.+.+++ +|..++.++....++|..+++.+.+++-++.||++.|.+.
T Consensus 93 ~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~-----~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~ 167 (495)
T PRK14995 93 TASWLIATRALLAIGAAMIVPATLAGIRATFTEEK-----QRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLIN 167 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHH
Confidence 45677777788899999988887777777775422 3788999999999999999999999999999999999986
Q ss_pred HHHHHHHHHH
Q 016875 106 SVATLIGLIA 115 (381)
Q Consensus 106 ~i~m~~~l~~ 115 (381)
....++.+++
T Consensus 168 ~~~~~~~~~l 177 (495)
T PRK14995 168 VPIVLVVMGL 177 (495)
T ss_pred HHHHHHHHHH
Confidence 6554444443
No 16
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.56 E-value=1.9e-06 Score=82.17 Aligned_cols=228 Identities=17% Similarity=0.130 Sum_probs=145.3
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++..+..+|.|...+...++..|.+++++ |...+++++.+.++|..+++.+.+++.++.+|+..|.+.
T Consensus 86 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 159 (352)
T cd06174 86 SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLIL 159 (352)
T ss_pred cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45677778888899999999999999999887633 788999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhcccceeecCCCCCchhhHHHHHHHHHHhccccCCCCcchhhhhhhhcccCCccccCCCCccchhhhh
Q 016875 106 SVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKA 185 (381)
Q Consensus 106 ~i~m~~~l~~f~~g~~~y~~~~p~g~pl~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~a 185 (381)
++..+++.+...... ++.........-
T Consensus 160 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~---------------------------------------- 186 (352)
T cd06174 160 AILGLLLALLLLFLL-------------RLLLLLALAFFL---------------------------------------- 186 (352)
T ss_pred HHHHHHHHHHHHHHH-------------HHHHHHHHHHHH----------------------------------------
Confidence 887777665544322 000000000000
Q ss_pred ccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhhccCCCcCCccccCCcccccchHHH
Q 016875 186 AIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFM 265 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~~~d~~i~g~~ip~~~~~~~~~~~i 265 (381)
....+. .+.+....+..+..+.+. .....+.....+..
T Consensus 187 -----------------------------------~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 224 (352)
T cd06174 187 -----------------------------------LSFGYY-GLLTYLPLYLQEVLGLSA------AEAGLLLSLFGLGG 224 (352)
T ss_pred -----------------------------------HHhHHH-HHHHHHHHHHHHhcCCCH------HHHHHHHHHHHHHH
Confidence 000000 000000001100001110 11122333334444
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCCCcc-hhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHH
Q 016875 266 AILIPIYEFLFVPFARKITGHPAGITQLQ-RVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIA 344 (381)
Q Consensus 266 i~~~p~~~~~~~p~~~k~~~~~~~~s~l~-ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~ 344 (381)
++..++..++ .+|.+++ + -+.++.++..++++.....+ +.++.+..+++.+++
T Consensus 225 ~i~~~~~~~~----~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~---------------~~~~~~~~~~~~g~~ 278 (352)
T cd06174 225 ILGALLGGLL----SDRLGRR-------RLLLLIGLLLAALGLLLLALAP---------------SLALLLVALLLLGFG 278 (352)
T ss_pred HHHHHHHHHH----HHHHHhh-------hHHHHHHHHHHHHHHHHHHHhc---------------cHHHHHHHHHHHHHH
Confidence 4555555543 3444321 1 35566666666655443221 266777889999999
Q ss_pred HHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 345 DMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 345 E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+....+.....+.+..|++.|+..+|++.....+|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (352)
T cd06174 279 LGFAFPALLTLASELAPPEARGTASGLFNTFGSLGG 314 (352)
T ss_pred HhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988876653
No 17
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.51 E-value=2.9e-06 Score=85.69 Aligned_cols=84 Identities=12% Similarity=0.074 Sum_probs=68.8
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...+.++..+..+|.|...|...+++.|.++++ +|...+.+++.+.++|..+++.+.+++.+++||++.|.+.
T Consensus 89 ~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~ 162 (485)
T TIGR00711 89 NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE------KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLIN 162 (485)
T ss_pred CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhh
Confidence 3556677777888899999999999999988642 3678899999999999999999999999999999999886
Q ss_pred HHHHHHHHHH
Q 016875 106 SVATLIGLIA 115 (381)
Q Consensus 106 ~i~m~~~l~~ 115 (381)
++..+++++.
T Consensus 163 ~~~~~~~~~~ 172 (485)
T TIGR00711 163 VPIGIIVVVV 172 (485)
T ss_pred hHHHHHHHHH
Confidence 6555444443
No 18
>TIGR00895 2A0115 benzoate transport.
Probab=98.46 E-value=1.5e-05 Score=77.58 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=67.8
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++..+..+|.|..-+...+...|.++++ +|...++++..+.++|..+++.+.+++.++.||+..|.+.
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~ 177 (398)
T TIGR00895 104 NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKR------FRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVG 177 (398)
T ss_pred chHHHHHHHHHHhcccccchhhHHHHHHHHcCHH------hhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhh
Confidence 4556777788889999999999999999988643 3678889999999999999999999999999999999988
Q ss_pred HHHHHHHH
Q 016875 106 SVATLIGL 113 (381)
Q Consensus 106 ~i~m~~~l 113 (381)
++..++..
T Consensus 178 ~~~~~~~~ 185 (398)
T TIGR00895 178 GIAPLLLL 185 (398)
T ss_pred hhHHHHHH
Confidence 64444333
No 19
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.46 E-value=1.2e-05 Score=80.11 Aligned_cols=83 Identities=13% Similarity=0.040 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 107 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i 107 (381)
..+++...+..++.|...+...+...|.++++ ++.+...+++++.++|..+++.+.+++.+..||++.|.+.++
T Consensus 111 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 111 LAIYLLGLWDGFFGSLGVTALLAATPALVGRE------NLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH------HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34444445556677777777777777776542 366778889999999999999999998888899999998887
Q ss_pred HHHHHHHHH
Q 016875 108 ATLIGLIAL 116 (381)
Q Consensus 108 ~m~~~l~~f 116 (381)
..+++.+..
T Consensus 185 ~~~~~~~~~ 193 (417)
T PRK10489 185 GTFITLLPL 193 (417)
T ss_pred HHHHHHHHH
Confidence 776665543
No 20
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.41 E-value=5.5e-06 Score=93.04 Aligned_cols=82 Identities=10% Similarity=0.108 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.++++..+.++|.+++.|...+++.|.+++++ +..+.+++.++.++|.++++.+.+++-+..||++.|.+.
T Consensus 107 s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~ 180 (1140)
T PRK06814 107 SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALL 180 (1140)
T ss_pred hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 46778888899999999999999999999998643 778999999999999999999999999999999999544
Q ss_pred HHHHHHHH
Q 016875 106 SVATLIGL 113 (381)
Q Consensus 106 ~i~m~~~l 113 (381)
++..++++
T Consensus 181 ~~~~~~~~ 188 (1140)
T PRK06814 181 MGIAVLGW 188 (1140)
T ss_pred HHHHHHHH
Confidence 44444333
No 21
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.40 E-value=1e-05 Score=79.69 Aligned_cols=79 Identities=14% Similarity=-0.001 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
.+.++++..+.+.+.+..-|...++..+ ++ +++...+.+.....++|..+++.+.+++.+++||+..|.+.+
T Consensus 94 ~~~l~~~~~l~~~~~~~~~p~~~al~~~-~~-------~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~ 165 (382)
T TIGR00902 94 AWLLFIAIGLFALFFSAGMPIGDALANT-WQ-------KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILT 165 (382)
T ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHH-HH-------HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 4555566556666666666666555422 21 135567888999999999999999999999999999998876
Q ss_pred HHHHHHH
Q 016875 107 VATLIGL 113 (381)
Q Consensus 107 i~m~~~l 113 (381)
+..++.+
T Consensus 166 ~~~~~~~ 172 (382)
T TIGR00902 166 AGLAFML 172 (382)
T ss_pred HHHHHHH
Confidence 5543333
No 22
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.36 E-value=2.4e-05 Score=77.30 Aligned_cols=83 Identities=16% Similarity=0.156 Sum_probs=67.7
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...+.++..+..+|.|...|...+...|.++++ +|.....+++.+.++|.++++.+..++.+..+|+..|.+.
T Consensus 102 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 175 (406)
T PRK11551 102 DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR------LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVG 175 (406)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 3456667777888888888899999999988643 3788899999999999999999988888899999999987
Q ss_pred HHHHHHHHH
Q 016875 106 SVATLIGLI 114 (381)
Q Consensus 106 ~i~m~~~l~ 114 (381)
++..++..+
T Consensus 176 ~~~~~~~~~ 184 (406)
T PRK11551 176 GVGPLLLVP 184 (406)
T ss_pred HHHHHHHHH
Confidence 765554443
No 23
>PRK03545 putative arabinose transporter; Provisional
Probab=98.36 E-value=1.4e-05 Score=78.71 Aligned_cols=83 Identities=17% Similarity=0.081 Sum_probs=66.5
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++-.+.++|.|.+-|...++..|.++++ +|.+.++++..+.++|..+++.+.+++.+++||++.|.+.
T Consensus 96 ~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~ 169 (390)
T PRK03545 96 NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAG------KKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAI 169 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh------hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHH
Confidence 3455666667777888888888888889888653 2678889999999999999999999998899999999987
Q ss_pred HHHHHHHHH
Q 016875 106 SVATLIGLI 114 (381)
Q Consensus 106 ~i~m~~~l~ 114 (381)
++..++..+
T Consensus 170 ~~~~~l~~~ 178 (390)
T PRK03545 170 GGGALITLL 178 (390)
T ss_pred HHHHHHHHH
Confidence 766555443
No 24
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.31 E-value=3.1e-05 Score=76.64 Aligned_cols=83 Identities=14% Similarity=0.084 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
.+.+++...+..++.|..-+...+...|.+++++ +.+...+.+...++|..+++.+.+++.++.||++.|.+.+
T Consensus 101 ~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~ 174 (406)
T PRK15402 101 IEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFA 174 (406)
T ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHH
Confidence 4455666667777888777777788888876532 4566778888888899999999999888899999999877
Q ss_pred HHHHHHHHH
Q 016875 107 VATLIGLIA 115 (381)
Q Consensus 107 i~m~~~l~~ 115 (381)
+..+++.+.
T Consensus 175 ~~~~~~~~~ 183 (406)
T PRK15402 175 ALAALSFFG 183 (406)
T ss_pred HHHHHHHHH
Confidence 776665543
No 25
>PRK10504 putative transporter; Provisional
Probab=98.30 E-value=4.4e-05 Score=77.17 Aligned_cols=86 Identities=14% Similarity=0.090 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
...++++..+..+|.|..-|...+.+.|.++++ ++...+.++....++|..+++.+.+++.++.||++.|.+..
T Consensus 98 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~ 171 (471)
T PRK10504 98 LNELLLARVLQGVGGAMMVPVGRLTVMKIVPRE------QYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINI 171 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHH
Confidence 456677778888999998888888888876532 35678889999999999999999999999999999999877
Q ss_pred HHHHHHHHHHhh
Q 016875 107 VATLIGLIALAI 118 (381)
Q Consensus 107 i~m~~~l~~f~~ 118 (381)
....++.+....
T Consensus 172 ~~~~l~~~~~~~ 183 (471)
T PRK10504 172 PVGIIGAIATLM 183 (471)
T ss_pred HHHHHHHHHHHH
Confidence 655555544443
No 26
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.28 E-value=4.1e-05 Score=74.58 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=70.6
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++..+..+|.|..-+...++..|.++++ +|...+.+++...++|..+++.+.+++.++.||+..|.+.
T Consensus 92 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 165 (385)
T TIGR00710 92 NIETLLVLRFVQAFGASAGSVISQALVRDIYPGE------ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFL 165 (385)
T ss_pred cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 3456677777888999999899999999888643 3678899999999999999999999998999999999987
Q ss_pred HHHHHHHHHHHhh
Q 016875 106 SVATLIGLIALAI 118 (381)
Q Consensus 106 ~i~m~~~l~~f~~ 118 (381)
++..++..+....
T Consensus 166 ~~~~~~~~~~~~~ 178 (385)
T TIGR00710 166 SLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHH
Confidence 7766665554443
No 27
>PRK10054 putative transporter; Provisional
Probab=98.27 E-value=8.6e-06 Score=80.77 Aligned_cols=78 Identities=13% Similarity=0.108 Sum_probs=58.8
Q ss_pred HHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHH
Q 016875 30 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVAT 109 (381)
Q Consensus 30 ~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m 109 (381)
+++...+...+.+.+.|...+...|.++++ +|.+.++++|...|+|..+++.+.+++.+ .||+..|.++++..
T Consensus 99 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~ 171 (395)
T PRK10054 99 VVLFFALINCAYSVFSTVLKAWFADNLSST------SKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICS 171 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHH
Confidence 333334445555666777777777777542 36789999999999999999999998874 79999999888777
Q ss_pred HHHHH
Q 016875 110 LIGLI 114 (381)
Q Consensus 110 ~~~l~ 114 (381)
+++++
T Consensus 172 ~i~~i 176 (395)
T PRK10054 172 AFPLV 176 (395)
T ss_pred HHHHH
Confidence 77654
No 28
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.25 E-value=3.9e-05 Score=76.43 Aligned_cols=83 Identities=13% Similarity=0.162 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh---eeEeecccchhHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI---VYVFIDQGWWLGFLI 104 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~---~~i~~~~g~~~~F~i 104 (381)
+.++++..+..+|.|..-+...++.+|.+++++ |.....+++.+.++|.++++.+. ....+..||++.|.+
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 467788888999999999988899999887543 67888999999999999999998 777788999999999
Q ss_pred HHHHHHHHHHHH
Q 016875 105 SSVATLIGLIAL 116 (381)
Q Consensus 105 ~~i~m~~~l~~f 116 (381)
+++..++.++..
T Consensus 202 ~~~~~~~~~~~~ 213 (481)
T TIGR00879 202 QLIPAGLLFLGL 213 (481)
T ss_pred HHHHHHHHHHHH
Confidence 776666555444
No 29
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.25 E-value=3.8e-05 Score=75.61 Aligned_cols=81 Identities=12% Similarity=-0.026 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.+++...+..++.+...|-..+...|. .+ ++...+.+.....++|..+++.+.+++.+++||+..|.+.
T Consensus 93 ~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~-------~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~ 164 (382)
T PRK11128 93 SFWLLFVAIGLFNLFFSPLVPLTDALANTW-QK-------QIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWIL 164 (382)
T ss_pred cHHHHHHHHHHHHHHHcccccHHHHHHHHH-Hh-------hccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 345555666667777788888766665553 21 2445566777788999999999999999999999999887
Q ss_pred HHHHHHHHH
Q 016875 106 SVATLIGLI 114 (381)
Q Consensus 106 ~i~m~~~l~ 114 (381)
++..++..+
T Consensus 165 ~~~~~~~~~ 173 (382)
T PRK11128 165 TAGVASMLL 173 (382)
T ss_pred HHHHHHHHH
Confidence 765554443
No 30
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.23 E-value=1.6e-05 Score=78.39 Aligned_cols=84 Identities=18% Similarity=0.003 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.++++..+..++.+. -+...+...|+++++ +|.....++..+.++|.++++.+.+++.+..||+..|.+.
T Consensus 106 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 178 (408)
T PRK09874 106 NIWQFLILRALLGLLGGF-VPNANALIATQVPRN------KSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFIT 178 (408)
T ss_pred hHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHh------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 345556666666666554 366666677766432 3677888899999999999999999998889999999988
Q ss_pred HHHHHHHHHHH
Q 016875 106 SVATLIGLIAL 116 (381)
Q Consensus 106 ~i~m~~~l~~f 116 (381)
++..+++.+..
T Consensus 179 ~~~~~~~~~~~ 189 (408)
T PRK09874 179 ASVLFLCFLVT 189 (408)
T ss_pred HHHHHHHHHHH
Confidence 77666555433
No 31
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.17 E-value=0.0001 Score=75.91 Aligned_cols=89 Identities=18% Similarity=0.118 Sum_probs=74.7
Q ss_pred chhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHH
Q 016875 25 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLI 104 (381)
Q Consensus 25 ~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i 104 (381)
.+.+.+++...++.+|.+++.|...+++.+..++++ ..++.++.-...|+.-++||.+.+.+-...|-.+.|.+
T Consensus 101 ~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~i 174 (524)
T PF05977_consen 101 LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLI 174 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 356677777788999999999999999999987654 67788899999999999999999988888899999999
Q ss_pred HHHHHHHHHHHHhhc
Q 016875 105 SSVATLIGLIALAIG 119 (381)
Q Consensus 105 ~~i~m~~~l~~f~~g 119 (381)
-+++.++++..+..-
T Consensus 175 nalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 175 NALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHc
Confidence 988887776655443
No 32
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.16 E-value=0.00017 Score=71.16 Aligned_cols=76 Identities=17% Similarity=0.028 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHH
Q 016875 29 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVA 108 (381)
Q Consensus 29 ~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~ 108 (381)
.++++-.+..+|.|..-++..+...|.+++++ |.+...++..+.++|..+++.+.+++-+..||+..|.++++.
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~ 187 (399)
T PRK05122 114 LLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLL 187 (399)
T ss_pred HHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 45555567788889898988888888886543 567788888999999999999988888889999988876654
Q ss_pred HH
Q 016875 109 TL 110 (381)
Q Consensus 109 m~ 110 (381)
.+
T Consensus 188 ~~ 189 (399)
T PRK05122 188 AL 189 (399)
T ss_pred HH
Confidence 43
No 33
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.13 E-value=8.5e-05 Score=71.70 Aligned_cols=85 Identities=8% Similarity=0.056 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHh-hhheeEeecccchhHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV-TAIVYVFIDQGWWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~-~~~~~i~~~~g~~~~F~i 104 (381)
+.+.++++..+..+|.|..-|...++..|.+++++ |...+.++..+.++|..+++ ++...+.+..+|++.|.+
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 155 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIV 155 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHH
Confidence 45667777788889999999999999999887533 67778888999999999998 566677778899999998
Q ss_pred HHHHHHHHHHHH
Q 016875 105 SSVATLIGLIAL 116 (381)
Q Consensus 105 ~~i~m~~~l~~f 116 (381)
.++..++..+..
T Consensus 156 ~~~~~~~~~~~~ 167 (379)
T TIGR00881 156 PGIIAIIVSLIC 167 (379)
T ss_pred HHHHHHHHHHHH
Confidence 776655544333
No 34
>PRK12382 putative transporter; Provisional
Probab=98.11 E-value=0.00019 Score=70.57 Aligned_cols=76 Identities=13% Similarity=0.014 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
...++++-.+..+|.+..-|...+.+.|.++++ +|....+++..+.++|..+++.+.+++.+.+||+..+.+..
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~ 185 (392)
T PRK12382 112 FALLVVGRLILGFGESQLLTGALTWGLGLVGPK------HSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTM 185 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc------ccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHH
Confidence 445666667778888877777777777777542 36778889999999999999999999888899998776654
Q ss_pred HH
Q 016875 107 VA 108 (381)
Q Consensus 107 i~ 108 (381)
+.
T Consensus 186 ~~ 187 (392)
T PRK12382 186 VL 187 (392)
T ss_pred HH
Confidence 43
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.11 E-value=0.00016 Score=72.97 Aligned_cols=81 Identities=10% Similarity=0.020 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecc-cchhHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-GWWLGFLISS 106 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~-g~~~~F~i~~ 106 (381)
..+++.-.+.++|.|..-|.......|-++++ +|.....+++.+.++|..+++.+.+++.+.. ||+..|.+.+
T Consensus 132 ~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~ 205 (465)
T TIGR00894 132 ALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK------ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFG 205 (465)
T ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhh
Confidence 44555666778888888888888888877643 3788999999999999999999999998884 9999999877
Q ss_pred HHHHHHHH
Q 016875 107 VATLIGLI 114 (381)
Q Consensus 107 i~m~~~l~ 114 (381)
+..++..+
T Consensus 206 ~~~~~~~~ 213 (465)
T TIGR00894 206 IVGCAWSL 213 (465)
T ss_pred HHHHHHHH
Confidence 76544443
No 36
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.08 E-value=0.00014 Score=81.69 Aligned_cols=63 Identities=10% Similarity=0.063 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeec
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 95 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~ 95 (381)
.+.++++..+.+++.|.+-|...+++.|.+++++ |...++++..+.++|.++++.+.+++.+.
T Consensus 103 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 103 FWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5667777778889999999999999999987643 77899999999999999999998888655
No 37
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.05 E-value=0.00029 Score=68.70 Aligned_cols=85 Identities=13% Similarity=0.218 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...+++...+..++.|...+...++..|.++++ +|...+++++.+.++|..+++.+.+++.+..||++.|.+.
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 151 (377)
T PRK11102 78 TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKE------EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVL 151 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 3456666777788888888888889999887643 2678899999999999999999999998889999999887
Q ss_pred HHHHHHHHHHH
Q 016875 106 SVATLIGLIAL 116 (381)
Q Consensus 106 ~i~m~~~l~~f 116 (381)
++..++..+..
T Consensus 152 ~~~~~~~~~~~ 162 (377)
T PRK11102 152 ALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHH
Confidence 76665554433
No 38
>TIGR00898 2A0119 cation transport protein.
Probab=98.04 E-value=0.0004 Score=70.82 Aligned_cols=82 Identities=15% Similarity=0.070 Sum_probs=62.9
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++..+..+|.|+.-+...++..|.+++++ |.....++..+.++|.++++.+...+.+ |++.|.+.
T Consensus 179 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~ 249 (505)
T TIGR00898 179 NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAV 249 (505)
T ss_pred cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHH
Confidence 34566777778889999999999999999886543 5566777788888999999888766654 99999888
Q ss_pred HHHHHHHHHHH
Q 016875 106 SVATLIGLIAL 116 (381)
Q Consensus 106 ~i~m~~~l~~f 116 (381)
++..++..+..
T Consensus 250 ~i~~~~~~~~~ 260 (505)
T TIGR00898 250 SLPTFLFFLLS 260 (505)
T ss_pred HHHHHHHHHHH
Confidence 77666555444
No 39
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.04 E-value=0.00023 Score=69.65 Aligned_cols=83 Identities=16% Similarity=0.211 Sum_probs=66.2
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeeccc--chhHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG--WWLGFL 103 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g--~~~~F~ 103 (381)
+...++++..+.++|.|..-+...++..|.+++++ |.....++..+.++|..+++.+.+.+.+..+ |++.|.
T Consensus 99 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~ 172 (405)
T TIGR00891 99 GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFF 172 (405)
T ss_pred cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHH
Confidence 35566777788889999999988899998886532 6788999999999999999999888877666 999998
Q ss_pred HHHHHHHHHHH
Q 016875 104 ISSVATLIGLI 114 (381)
Q Consensus 104 i~~i~m~~~l~ 114 (381)
+.++..++.++
T Consensus 173 ~~~~~~~~~~~ 183 (405)
T TIGR00891 173 ISILPIIFALW 183 (405)
T ss_pred HHHHHHHHHHH
Confidence 87665554443
No 40
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.02 E-value=0.00026 Score=70.60 Aligned_cols=81 Identities=19% Similarity=0.207 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe-------ecccchhHH
Q 016875 30 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF-------IDQGWWLGF 102 (381)
Q Consensus 30 ~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~-------~~~g~~~~F 102 (381)
+++...+..++.+.+.....++..|..++ ++ +|.+..++-..+.++|++++..+.+.+. +..||+..|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~---~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~ 176 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLD--PR---ERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFA 176 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCC--HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHH
Confidence 33334455666667777777777776543 32 3667778888888888777655433221 356899888
Q ss_pred HHHHHHHHHHHHH
Q 016875 103 LISSVATLIGLIA 115 (381)
Q Consensus 103 ~i~~i~m~~~l~~ 115 (381)
.+.++...+..++
T Consensus 177 ~i~~~l~~~~~~~ 189 (437)
T TIGR00792 177 LVLALIGVVSLII 189 (437)
T ss_pred HHHHHHHHHHHHH
Confidence 8777665554443
No 41
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.00 E-value=0.00054 Score=67.47 Aligned_cols=80 Identities=10% Similarity=0.060 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
...++++..+..+|.|...+....+..|.++++ ++.....++..+.++|..+++.+.+++.++.||+..|.+.+
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~ 169 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT------QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLL 169 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHH
Confidence 455666666777777777676667777766542 25667788888999999999999998888899999999876
Q ss_pred HHHHHH
Q 016875 107 VATLIG 112 (381)
Q Consensus 107 i~m~~~ 112 (381)
+..++.
T Consensus 170 ~~~~~~ 175 (394)
T PRK11652 170 LLGAGV 175 (394)
T ss_pred HHHHHH
Confidence 655443
No 42
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.99 E-value=0.00013 Score=72.54 Aligned_cols=79 Identities=11% Similarity=0.196 Sum_probs=65.0
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++-.+..+|.|+.-+...++..|.++++ +|....+++..+.++|.++++.+.+++.+.+||++.|.++
T Consensus 105 ~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~ 178 (426)
T PRK12307 105 GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH------LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVG 178 (426)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh------HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHH
Confidence 4566777778888999998899999999888653 2667788899999999999999999998999999999886
Q ss_pred HHHHH
Q 016875 106 SVATL 110 (381)
Q Consensus 106 ~i~m~ 110 (381)
++..+
T Consensus 179 ~~~~~ 183 (426)
T PRK12307 179 LLPVL 183 (426)
T ss_pred HHHHH
Confidence 55443
No 43
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.97 E-value=0.00032 Score=68.02 Aligned_cols=80 Identities=20% Similarity=0.347 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe--------ecccchh
Q 016875 29 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF--------IDQGWWL 100 (381)
Q Consensus 29 ~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~--------~~~g~~~ 100 (381)
.++++..+..+|.|..-+...++..|.+++++ |.....++..+.++|.++++.+...+. +.+||++
T Consensus 98 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~ 171 (394)
T TIGR00883 98 LLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRI 171 (394)
T ss_pred HHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHH
Confidence 45666677888889888888888888876532 667888889999999998887665442 3579999
Q ss_pred HHHHHHHHHHHHHH
Q 016875 101 GFLISSVATLIGLI 114 (381)
Q Consensus 101 ~F~i~~i~m~~~l~ 114 (381)
.|.+.++..++++.
T Consensus 172 ~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 172 PFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 99887766655543
No 44
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.96 E-value=0.00049 Score=66.79 Aligned_cols=83 Identities=17% Similarity=0.142 Sum_probs=52.8
Q ss_pred HHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHH
Q 016875 30 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVAT 109 (381)
Q Consensus 30 ~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m 109 (381)
+++.-.+...+.+..-|...++..|..++++ +.+.....+.+.+.++|..+++.+.+++.++.||++.|.+.++..
T Consensus 90 l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~ 165 (375)
T TIGR00899 90 LLVLGVLLSSFASTANPQLFALAREHADRTG----REAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAF 165 (375)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc----hhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHH
Confidence 3333333444444455555555555433211 111223577788889999999999999988999999999988766
Q ss_pred HHHHHHH
Q 016875 110 LIGLIAL 116 (381)
Q Consensus 110 ~~~l~~f 116 (381)
++..+..
T Consensus 166 ~~~~~~~ 172 (375)
T TIGR00899 166 VLCGVLV 172 (375)
T ss_pred HHHHHHH
Confidence 6555443
No 45
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.94 E-value=0.00038 Score=68.97 Aligned_cols=83 Identities=13% Similarity=0.099 Sum_probs=68.5
Q ss_pred chhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHH
Q 016875 25 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLI 104 (381)
Q Consensus 25 ~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i 104 (381)
.+.+.+++.-.+..++.|..-|...++..|.++++ +|.....+++.+.|+|..+++.+.+++.+..||++.|.+
T Consensus 106 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~------~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~ 179 (394)
T PRK10213 106 NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPR------TVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNA 179 (394)
T ss_pred ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 34667777778888999999999999999988643 367889999999999999999999999999999999988
Q ss_pred HHHHHHHHH
Q 016875 105 SSVATLIGL 113 (381)
Q Consensus 105 ~~i~m~~~l 113 (381)
.++..++.+
T Consensus 180 ~~~l~~~~~ 188 (394)
T PRK10213 180 AAVMGVLCI 188 (394)
T ss_pred HHHHHHHHH
Confidence 765544433
No 46
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.87 E-value=0.00029 Score=67.93 Aligned_cols=83 Identities=18% Similarity=0.097 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++..+..+|.|..-+...+...+.+++ +|.....++..+.++|++++..+.+.+.+..||++.|.+.
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~ 162 (377)
T TIGR00890 90 SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-------KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYM 162 (377)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-------ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHH
Confidence 455666777777888887666666666665532 2567888999999999887666666666778999999987
Q ss_pred HHHHHHHHHH
Q 016875 106 SVATLIGLIA 115 (381)
Q Consensus 106 ~i~m~~~l~~ 115 (381)
++..++..+.
T Consensus 163 ~~~~~~~~~~ 172 (377)
T TIGR00890 163 GIIFLLVIVL 172 (377)
T ss_pred HHHHHHHHHH
Confidence 7665554443
No 47
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.86 E-value=4.5e-06 Score=82.57 Aligned_cols=87 Identities=17% Similarity=0.194 Sum_probs=72.3
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeeccc-chhHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG-WWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g-~~~~F~i 104 (381)
+.+.+.+.=.+.++|....-|-..++++|.|+++ +|.+.|.||||++++|+.+|.+..+++.+..+ |+++|..
T Consensus 120 ~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~------~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~ 193 (493)
T KOG1330|consen 120 HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD------KRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRG 193 (493)
T ss_pred HHHHHHHHHHHhccchhhhcccchhHhhhcCcch------hhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEe
Confidence 4556666667899999999999999999999875 38999999999999999999999999998776 9999987
Q ss_pred HHHHH-HHHHHHHhh
Q 016875 105 SSVAT-LIGLIALAI 118 (381)
Q Consensus 105 ~~i~m-~~~l~~f~~ 118 (381)
.++.+ .+++++|+.
T Consensus 194 ~avl~vi~~~L~~~f 208 (493)
T KOG1330|consen 194 SAVLGVIVGLLVFLF 208 (493)
T ss_pred ehHHHHHHHHHHHhh
Confidence 66555 445555554
No 48
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.84 E-value=0.00027 Score=71.55 Aligned_cols=77 Identities=17% Similarity=0.103 Sum_probs=56.3
Q ss_pred HHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHH
Q 016875 35 YLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 114 (381)
Q Consensus 35 ~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~ 114 (381)
.+..+|.|..-+-..+...+-++ + +|.....+++.+.++|..+++.+.+++.+.+||++.|.+.++..+++.+
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~--~-----~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 116 FITGLGLAFNFQPSLTMLGKYFY--R-----RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCV 188 (455)
T ss_pred HHHHhcchhhhhHHHHHHHHHHH--h-----hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 44566777543333355556552 1 3678889999999999999999999998999999999998887766655
Q ss_pred HHhh
Q 016875 115 ALAI 118 (381)
Q Consensus 115 ~f~~ 118 (381)
..++
T Consensus 189 ~~~~ 192 (455)
T TIGR00892 189 CGAL 192 (455)
T ss_pred HHHH
Confidence 4433
No 49
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.78 E-value=0.00078 Score=66.56 Aligned_cols=45 Identities=18% Similarity=0.174 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHH
Q 016875 71 FNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 115 (381)
Q Consensus 71 f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~ 115 (381)
..+...+.++|..+++.+.+++.++.||+..|.+.++..++..+.
T Consensus 145 ~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~ 189 (393)
T PRK15011 145 SSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVM 189 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 368888999999999999999999999999998877655444433
No 50
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.75 E-value=0.0027 Score=64.64 Aligned_cols=91 Identities=13% Similarity=0.045 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe--ec----------
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF--ID---------- 95 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~--~~---------- 95 (381)
..+.+++.+.-++.....+...++++|..++++. +.+.++.|+.+.+|+|+.++..+.++.. +.
T Consensus 115 ~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~----~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~ 190 (477)
T TIGR01301 115 IVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR----RTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACG 190 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccc
Confidence 3455556666667777777788999999987652 2467999999999999999988776541 11
Q ss_pred ---ccchhHHHHHHHHHHHHHHHHhhcccc
Q 016875 96 ---QGWWLGFLISSVATLIGLIALAIGKPF 122 (381)
Q Consensus 96 ---~g~~~~F~i~~i~m~~~l~~f~~g~~~ 122 (381)
.+++..|.++++.++++..+-...-|.
T Consensus 191 ~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E 220 (477)
T TIGR01301 191 VSCANLKSCFLIDIILLAILTYIALSAVKE 220 (477)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 267889999998888877766654443
No 51
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.75 E-value=0.0026 Score=65.10 Aligned_cols=84 Identities=8% Similarity=0.083 Sum_probs=66.0
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee-cccchhHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI-DQGWWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~-~~g~~~~F~i 104 (381)
+...+++...+.+++.+...+...++..|.+++++ |.+...+.-.+.++|.++++.+..++.+ ..||+..|.+
T Consensus 106 ~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i 179 (491)
T PRK11010 106 QLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWL 179 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHH
Confidence 45566666677788888888889999999887432 6677788889999999999988888888 4799999998
Q ss_pred HHHHHHHHHHH
Q 016875 105 SSVATLIGLIA 115 (381)
Q Consensus 105 ~~i~m~~~l~~ 115 (381)
.++.+++..+.
T Consensus 180 ~a~l~ll~~l~ 190 (491)
T PRK11010 180 MAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHH
Confidence 87766655443
No 52
>PRK11043 putative transporter; Provisional
Probab=97.73 E-value=0.0014 Score=64.68 Aligned_cols=84 Identities=14% Similarity=0.149 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++..+.++|.|..-+...++..|.+++++ +.+.++......++|..+++.+.+++.+++||+..|.+.
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~ 166 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATL 166 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 34556666677777777777777778888776532 556778888888999999999999999999999999887
Q ss_pred HHHHHHHHHH
Q 016875 106 SVATLIGLIA 115 (381)
Q Consensus 106 ~i~m~~~l~~ 115 (381)
++..++..+.
T Consensus 167 ~~~~~~~~~~ 176 (401)
T PRK11043 167 FAITLLLILP 176 (401)
T ss_pred HHHHHHHHHH
Confidence 7666555443
No 53
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.72 E-value=0.0012 Score=66.03 Aligned_cols=253 Identities=10% Similarity=0.088 Sum_probs=137.6
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhhe----eEeec---ccch
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV----YVFID---QGWW 99 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~----~i~~~---~g~~ 99 (381)
...+++...+..++...+.-+..+++.|..++.|. |.+..+|-.++.++|.++...+.+ +..+. .+|.
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~ 177 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYR 177 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHH
Confidence 34456666677888888999999999998876542 556666666666667654444444 33332 2688
Q ss_pred hHHHHHHHHHHHHHHHHhhcccceeecCCCCCchhhHHHHHHHHHHhccccCCCCcchhhhhhhhcccCCccccCCCCcc
Q 016875 100 LGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQF 179 (381)
Q Consensus 100 ~~F~i~~i~m~~~l~~f~~g~~~y~~~~p~g~pl~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (381)
+.+.+.++..+++..+.....|. +.++++.+ + +..
T Consensus 178 ~~~~v~~iv~~v~~~i~~~~~ke-~~~~~~~~--------------~------------------------------~~~ 212 (428)
T PF13347_consen 178 WMALVLAIVGLVFFLITFFFVKE-RSVEVTEQ--------------E------------------------------KKI 212 (428)
T ss_pred HHHHHHHHHHHHHhhhhhheeee-cccccccc--------------c------------------------------ccc
Confidence 77777666666655555544443 00000000 0 000
Q ss_pred chhhhhccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhhc-cCCCcCCccccCCccc
Q 016875 180 RCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAY-MDPRLGSIKVPTPSIP 258 (381)
Q Consensus 180 ~~L~~a~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~~-~d~~i~g~~ip~~~~~ 258 (381)
++.+..+. + .++ |. ...++....+.+....-..+....+.+. ++.+ + -...+.
T Consensus 213 ~~~~~~~~------------~-----~~n-r~---~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~----~-~~~~~~ 266 (428)
T PF13347_consen 213 SLRDSLRS------------L-----FRN-RP---FRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE----G-LISIFM 266 (428)
T ss_pred ccccchhh------------h-----ccc-ch---HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc----h-hhHHHH
Confidence 00000000 0 011 11 2223333333444443333333333332 2222 0 011222
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHH
Q 016875 259 VLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQY 338 (381)
Q Consensus 259 ~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y 338 (381)
....+..++..|+..++ .+|.+++ +-+..|.++.+++.+...++. +-+.+|.+...
T Consensus 267 ~~~~~~~~v~~~~~~~l----~~r~gk~-------~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~ 322 (428)
T PF13347_consen 267 LIFFVASIVGSPLWGRL----SKRFGKK-------KVYIIGLLLAALGFLLLFFLG-------------PGSPWLVLILF 322 (428)
T ss_pred HHHHHHHHHHHHHHHHH----HHHccce-------eehhhhHHHHHHHHHHHHHHH-------------hhhHHHHHHHH
Confidence 23334445555555443 4565432 345567777777666554442 13578888999
Q ss_pred HHHHHHHHHhhhhhHHHHHhhcC-------chhHHHHHHHHHHHhhcc
Q 016875 339 CIFGIADMFTFVGLLEFFYKEAP-------AGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 339 ~l~~~~E~~~~~~glef~~~~aP-------~~m~s~~~g~~~l~~a~G 379 (381)
++.|++-....+...++..+..+ ++..|+.+|++.+..-+|
T Consensus 323 ~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~ 370 (428)
T PF13347_consen 323 ILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIG 370 (428)
T ss_pred HHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHH
Confidence 99999999888888888887776 566899999998876544
No 54
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.66 E-value=0.0099 Score=59.29 Aligned_cols=84 Identities=13% Similarity=0.055 Sum_probs=64.5
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++-.+..+|.|..-+.......|.|++++ +.+...++..+.++|..+++.+.+++.++.||++.|.+.
T Consensus 103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~ 176 (413)
T PRK15403 103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAII 176 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 45566777777778877655555566777776533 567789999999999999999999998889999999987
Q ss_pred HHHHHHHHHH
Q 016875 106 SVATLIGLIA 115 (381)
Q Consensus 106 ~i~m~~~l~~ 115 (381)
++..+++.+.
T Consensus 177 ~~~~~i~~~~ 186 (413)
T PRK15403 177 AVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHH
Confidence 7766665543
No 55
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.63 E-value=0.0013 Score=65.89 Aligned_cols=80 Identities=11% Similarity=0.158 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
...+++...+..++.|..-+...+...|.++++ +|.....+++.+.++|+.+++.+.+++.+++||++.|.+.+
T Consensus 111 ~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~------~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~ 184 (434)
T PRK11663 111 LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT------ERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAG 184 (434)
T ss_pred HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 344444455566777777788888888888643 37789999999999999999999999989999999999877
Q ss_pred HHHHHH
Q 016875 107 VATLIG 112 (381)
Q Consensus 107 i~m~~~ 112 (381)
+..++.
T Consensus 185 i~~~~~ 190 (434)
T PRK11663 185 IIAIVV 190 (434)
T ss_pred HHHHHH
Confidence 654433
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.62 E-value=0.0031 Score=61.95 Aligned_cols=83 Identities=13% Similarity=0.177 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
...++++..+..+|.|..-+...+...|.++++ +|....++++...++|..+++.+.+++.+..||+..|.+.+
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~ 164 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDR------RRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHH
Confidence 345566666777888887777788888877643 36788899999999999999999888888899999998877
Q ss_pred HHHHHHHHH
Q 016875 107 VATLIGLIA 115 (381)
Q Consensus 107 i~m~~~l~~ 115 (381)
+..++..+.
T Consensus 165 ~~~~i~~~~ 173 (392)
T PRK10473 165 AMGILVLLL 173 (392)
T ss_pred HHHHHHHHH
Confidence 665554443
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.60 E-value=0.0033 Score=62.21 Aligned_cols=76 Identities=9% Similarity=-0.034 Sum_probs=59.6
Q ss_pred HHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHH
Q 016875 31 YGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL 110 (381)
Q Consensus 31 ~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~ 110 (381)
++...+..+|.|++-|...+++.|.++++ +|.+...+.....++|..+|+.+.+++-+. .|...|.+.+...+
T Consensus 92 ~~~r~l~G~~~a~~~pa~~a~i~~~~~~~------~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~ 164 (393)
T PRK11195 92 LLAYGLVGIGAAAYSPAKYGILTELLPGE------KLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYL 164 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34456778999999999999999999753 378889999999999999999999888764 47777776665544
Q ss_pred HHH
Q 016875 111 IGL 113 (381)
Q Consensus 111 ~~l 113 (381)
++.
T Consensus 165 ~~~ 167 (393)
T PRK11195 165 LAA 167 (393)
T ss_pred HHH
Confidence 443
No 58
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.60 E-value=0.0048 Score=62.24 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeE--------eecccch
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV--------FIDQGWW 99 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i--------~~~~g~~ 99 (381)
..++++-.+..+|.|+.-|...++++|.+++++ |.....++-.+..+|.++++.+..++ .+..||+
T Consensus 121 ~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr 194 (479)
T PRK10077 121 PEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWR 194 (479)
T ss_pred HHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChH
Confidence 455666678889999999999999999997632 56677788888889988887655433 2467999
Q ss_pred hHHHHHHHHHHHHHHH
Q 016875 100 LGFLISSVATLIGLIA 115 (381)
Q Consensus 100 ~~F~i~~i~m~~~l~~ 115 (381)
+.|.+.++..++.++.
T Consensus 195 ~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 195 YMFASEAIPALLFLML 210 (479)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999877666655443
No 59
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.56 E-value=0.0027 Score=62.51 Aligned_cols=76 Identities=17% Similarity=0.106 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...++++-.+..+|.|.. ++..+...|.++++ +|....+++..+.++|..+++.+.+++.++.||+..|.+.
T Consensus 78 ~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~------~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~ 150 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPFL-LNAFAPAASQIREE------RRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPI 150 (368)
T ss_pred cHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 4456677777788888864 44444456666532 3788899999999999999999999999999999999884
Q ss_pred HHH
Q 016875 106 SVA 108 (381)
Q Consensus 106 ~i~ 108 (381)
++.
T Consensus 151 ~~l 153 (368)
T TIGR00903 151 AAV 153 (368)
T ss_pred HHH
Confidence 443
No 60
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.54 E-value=0.0055 Score=60.15 Aligned_cols=72 Identities=10% Similarity=0.042 Sum_probs=53.9
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFL 103 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~ 103 (381)
+...++++..+..+|.|...|...+...|..+++ +|.+.+++++.+.|+|..+++.+.+++.+...+...+.
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 164 (381)
T PRK03633 93 GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR------NRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV 164 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH
Confidence 4566777777888888888777766666665432 36788899999999999999999999887654444443
No 61
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.53 E-value=0.0066 Score=60.76 Aligned_cols=77 Identities=17% Similarity=0.282 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe--------ecccchh
Q 016875 29 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF--------IDQGWWL 100 (381)
Q Consensus 29 ~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~--------~~~g~~~ 100 (381)
.+.+.-.+..+|.|+.-|...+++.|.+++++ |....++.+.+.+.|.++++.+...+. +.+||++
T Consensus 126 ~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~ 199 (432)
T PRK10406 126 LLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRI 199 (432)
T ss_pred HHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHH
Confidence 46666678889999999999999999887532 556778888899999888876654433 2579999
Q ss_pred HHHHHHHHHHH
Q 016875 101 GFLISSVATLI 111 (381)
Q Consensus 101 ~F~i~~i~m~~ 111 (381)
.|.+.++..++
T Consensus 200 ~F~i~~~~~ll 210 (432)
T PRK10406 200 PFALGAVLAVV 210 (432)
T ss_pred HHHHHHHHHHH
Confidence 99987765444
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.52 E-value=0.0012 Score=65.61 Aligned_cols=49 Identities=16% Similarity=0.046 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHHhh
Q 016875 69 SYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 118 (381)
Q Consensus 69 ~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f~~ 118 (381)
..+.......++|..+++.+.+++.+ .+|+..|.+.++..++.++.++.
T Consensus 141 ~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~ 189 (420)
T PRK09528 141 FEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFF 189 (420)
T ss_pred ccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhc
Confidence 35567778889999999999988865 58999998877666665555443
No 63
>PRK09848 glucuronide transporter; Provisional
Probab=97.51 E-value=0.0078 Score=60.52 Aligned_cols=73 Identities=14% Similarity=0.053 Sum_probs=51.4
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCch-------hHH
Q 016875 294 QRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAG-------MRT 366 (381)
Q Consensus 294 ~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~-------m~s 366 (381)
+-+.+|+++.+++.+.... .. ..+.++.+...++.++|+.+..+...++..+.+|++ .+|
T Consensus 295 ~~~~~g~~~~~i~~~~~~~--------~~-----~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G 361 (448)
T PRK09848 295 NTFLIGALLGTCGYLLFFW--------VS-----VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEG 361 (448)
T ss_pred HHHHHHHHHHHHHHHHHHH--------cC-----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchh
Confidence 4456677776666544321 11 134566666678899999999999999998888754 579
Q ss_pred HHHHHHHHHhhcc
Q 016875 367 LLLHLHFCHCHLA 379 (381)
Q Consensus 367 ~~~g~~~l~~a~G 379 (381)
..+|++.+..-+|
T Consensus 362 ~~~~~~~~~~klg 374 (448)
T PRK09848 362 LTYSLFSFTRKCG 374 (448)
T ss_pred HHHHHHHHHHHHH
Confidence 9999988876544
No 64
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.46 E-value=0.0065 Score=61.26 Aligned_cols=80 Identities=9% Similarity=0.090 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHH-HHHhhhheeEeecccchhHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA-MIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa-~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
...+++...+..++.|..-|.......|.++++ +|....++++.+.++|. +.++++...+....||+++|.+.
T Consensus 120 ~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~ 193 (452)
T PRK11273 120 IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK------ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMP 193 (452)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHhCChH------HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHH
Confidence 345556666777888888887777888877543 26778899999999986 55555433333345999999987
Q ss_pred HHHHHHH
Q 016875 106 SVATLIG 112 (381)
Q Consensus 106 ~i~m~~~ 112 (381)
++..++.
T Consensus 194 ~~~~~~~ 200 (452)
T PRK11273 194 AFAAILV 200 (452)
T ss_pred HHHHHHH
Confidence 7655543
No 65
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.44 E-value=0.0074 Score=58.46 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecc--cchhHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ--GWWLGFLI 104 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~--g~~~~F~i 104 (381)
...++++..+..+|.|...+.......|.+++ ++....+++..+.++|..+++.+.+++.++. +|+..|.+
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~ 159 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-------RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAW 159 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 34555666777888888777777777666532 2567888999999999999998888877664 38999877
Q ss_pred HHHHHHHHH
Q 016875 105 SSVATLIGL 113 (381)
Q Consensus 105 ~~i~m~~~l 113 (381)
.++..+++.
T Consensus 160 ~~~~~~~~~ 168 (355)
T TIGR00896 160 WALPALLAL 168 (355)
T ss_pred HHHHHHHHH
Confidence 665444443
No 66
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.44 E-value=0.011 Score=58.43 Aligned_cols=83 Identities=12% Similarity=0.126 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeec-ccchhHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLIS 105 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~-~g~~~~F~i~ 105 (381)
.+.+++...+.+...+...|...++..|..++++ |.++..+..++.++|.++++.+..++.+. .||+..|.+.
T Consensus 94 ~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~ 167 (402)
T PRK11902 94 LWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLM 167 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHH
Confidence 4444444455667788888999999999876532 66777888888999999998888777775 5999999987
Q ss_pred HHHHHHHHHH
Q 016875 106 SVATLIGLIA 115 (381)
Q Consensus 106 ~i~m~~~l~~ 115 (381)
++..++....
T Consensus 168 a~~~l~~~l~ 177 (402)
T PRK11902 168 AGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHH
Confidence 7766555443
No 67
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.42 E-value=0.005 Score=60.52 Aligned_cols=83 Identities=13% Similarity=0.125 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.++++-.+..+|.|..-+.......|.++++ +|.+.+..+..+.++|..+++.+.+++.+..||++.|.+.
T Consensus 90 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~ 163 (382)
T PRK10091 90 SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG------KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLI 163 (382)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH------HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHH
Confidence 4566777777888888887777666776665442 2566788888999999999999988998899999999998
Q ss_pred HHHHHHHHH
Q 016875 106 SVATLIGLI 114 (381)
Q Consensus 106 ~i~m~~~l~ 114 (381)
++..++..+
T Consensus 164 ~~~~~~~~~ 172 (382)
T PRK10091 164 AVFNIAVLA 172 (382)
T ss_pred HHHHHHHHH
Confidence 776554443
No 68
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.42 E-value=0.011 Score=63.35 Aligned_cols=85 Identities=11% Similarity=0.137 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe------------
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF------------ 93 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~------------ 93 (381)
+.+.++++..+.++|.|+.-|...+++.|.++++ .|...+.++..+..+|+++++.++..+.
T Consensus 254 s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~------~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~ 327 (742)
T TIGR01299 254 GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQE------KRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSA 327 (742)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccc
Confidence 4566777888899999999999999999988642 2566777777777888887776443222
Q ss_pred -ecccchhHHHHHHHHHHHHHHHH
Q 016875 94 -IDQGWWLGFLISSVATLIGLIAL 116 (381)
Q Consensus 94 -~~~g~~~~F~i~~i~m~~~l~~f 116 (381)
...+|++.|.++++..+++++.+
T Consensus 328 ~~~~gWR~l~~i~~lp~ll~ll~~ 351 (742)
T TIGR01299 328 YQFHSWRVFVIVCAFPCVFAIGAL 351 (742)
T ss_pred cccccHHHHHHHHHHHHHHHHHHH
Confidence 12478999888877766665544
No 69
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.42 E-value=0.0029 Score=63.53 Aligned_cols=81 Identities=10% Similarity=0.133 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhhee-EeecccchhHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY-VFIDQGWWLGFLISS 106 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~-i~~~~g~~~~F~i~~ 106 (381)
..+++...+..++.|..-+.......|.+++++ |...+.+++.+.++|..+++.+.++ +.++.||+.+|.+.+
T Consensus 119 ~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~ 192 (438)
T TIGR00712 119 AIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPA 192 (438)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 344555666777788777777788888776533 6789999999999999988776654 445679999999977
Q ss_pred HHHHHHHH
Q 016875 107 VATLIGLI 114 (381)
Q Consensus 107 i~m~~~l~ 114 (381)
+..++..+
T Consensus 193 ~~~~i~~~ 200 (438)
T TIGR00712 193 ICAIIVAL 200 (438)
T ss_pred HHHHHHHH
Confidence 76655443
No 70
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.42 E-value=0.00045 Score=71.69 Aligned_cols=216 Identities=19% Similarity=0.101 Sum_probs=135.3
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
.-..|+...+..-+ +..++|++.+.|+++... -.-..+...|...|+.||+++++..+. .|+++.
T Consensus 59 nlv~ylt~~~~~~~-~~aa~~v~~f~G~~~~~~--l~g~~laD~f~gry~tI~~~s~i~~~G------------~~~lt~ 123 (571)
T KOG1237|consen 59 NLVTYLTLELHASG-GGAANNVNAFGGTQFLLP--LLGAFLADSFLGRYFTINIGSLISLLG------------LFGLTL 123 (571)
T ss_pred HHHHHHHHHhccch-HHHHHHHHHHhhHHHHHH--HHHHHHHHHHhHHHHHHHHHHHHHHHH------------HHHHHH
Confidence 44556666666666 899999999999999862 223357888999999999999987665 677888
Q ss_pred HHHHHHHHHHhhcccceeecC-CCCCchhhHHHHHHHHHHhccccCCCCcchhhhhhhhcccCCccccCCCCccchhhhh
Q 016875 107 VATLIGLIALAIGKPFYRIQQ-PGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKA 185 (381)
Q Consensus 107 i~m~~~l~~f~~g~~~y~~~~-p~g~pl~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~a 185 (381)
..|+.++..+.+ .+.... ..++|-+....++..++....... |.. +..+++..
T Consensus 124 ~a~~~~l~p~~~---~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~-----------------gg~------r~~~~~fG 177 (571)
T KOG1237|consen 124 SAMIPALLPFMC---KFKPGGNVCESPSKLQLAVLYGALYLIALGA-----------------GGI------RPCLLAFG 177 (571)
T ss_pred HHHhhhcCCccc---cCCCCCCcccCcchHHHHHHHHHHHHheecc-----------------CCC------CCcchhhc
Confidence 888777765554 111111 112333333334444443321100 000 01122222
Q ss_pred ccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhhccCC-CcCCccccCCcccccchHH
Q 016875 186 AIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDP-RLGSIKVPTPSIPVLPLLF 264 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~~~d~-~i~g~~ip~~~~~~~~~~~ 264 (381)
+... +++..+|++.. ...+.|..+.|..+.++.|+..++. +..||.+-.+..+..|.+.
T Consensus 178 adQf------------d~~~~~~~~~~--------~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~la 237 (571)
T KOG1237|consen 178 ADQF------------DELDPVEVKGI--------PSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALA 237 (571)
T ss_pred cccc------------CccCcchhhCc--------ccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHH
Confidence 2211 11112222221 3567888889999999999877775 5678888888889999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHH
Q 016875 265 MAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFV 313 (381)
Q Consensus 265 ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~ 313 (381)
+++|.|....+.++. +.--.+..+|.++.+++.-..+.+
T Consensus 238 i~iF~~g~~~y~~~~----------p~gsp~t~i~~Vlvaa~~k~~~~~ 276 (571)
T KOG1237|consen 238 ILIFLPGFPFYRYKK----------PRGSPKTRIGQVLVAAAFKRKAVV 276 (571)
T ss_pred HHHHHcCceeEEeeC----------CCCCchhHHHHHHHHHHHHHhccC
Confidence 999999888764321 122267788888888887765433
No 71
>PRK03699 putative transporter; Provisional
Probab=97.41 E-value=0.011 Score=58.26 Aligned_cols=84 Identities=14% Similarity=0.111 Sum_probs=62.3
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeE-eecccchhHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV-FIDQGWWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i-~~~~g~~~~F~i 104 (381)
+...++++..+..++.|..-+...+...|.+++++ |.......+...++|+.+++.+.+++ .++.||++.|.+
T Consensus 94 ~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~ 167 (394)
T PRK03699 94 SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYAC 167 (394)
T ss_pred hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 34566667777888888888888899999885422 55666777788889988888887766 456899999998
Q ss_pred HHHHHHHHHHH
Q 016875 105 SSVATLIGLIA 115 (381)
Q Consensus 105 ~~i~m~~~l~~ 115 (381)
.++..++..+.
T Consensus 168 ~~~~~~~~~~~ 178 (394)
T PRK03699 168 IGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHH
Confidence 77665554443
No 72
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.40 E-value=0.0014 Score=66.52 Aligned_cols=79 Identities=13% Similarity=0.195 Sum_probs=64.9
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.++++..+..+|.|+..+...++..|.++++ +|...+.+++.+.++|.++++.+.+++.+++||++.|.+.
T Consensus 107 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~ 180 (496)
T PRK03893 107 GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKH------LRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIG 180 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 4566777777888888988888889889888643 3677888999999999999999999999999999999876
Q ss_pred HHHHH
Q 016875 106 SVATL 110 (381)
Q Consensus 106 ~i~m~ 110 (381)
++..+
T Consensus 181 ~~~~~ 185 (496)
T PRK03893 181 ILPII 185 (496)
T ss_pred HHHHH
Confidence 55443
No 73
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.38 E-value=0.013 Score=59.88 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhhe----eEe----ecccchh
Q 016875 29 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV----YVF----IDQGWWL 100 (381)
Q Consensus 29 ~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~----~i~----~~~g~~~ 100 (381)
.+.+.-.+..+|.|+.-|+..++..|.++++. |.....+...+.++|..++..+.. ++. .++||++
T Consensus 120 ~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~ 193 (490)
T PRK10642 120 LLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRI 193 (490)
T ss_pred HHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHH
Confidence 35666678889999999999999999887532 445667777777777777764433 232 3689999
Q ss_pred HHHHHHHHH
Q 016875 101 GFLISSVAT 109 (381)
Q Consensus 101 ~F~i~~i~m 109 (381)
.|.+.++..
T Consensus 194 ~f~i~~~~~ 202 (490)
T PRK10642 194 PFFIALPLG 202 (490)
T ss_pred HHHHHHHHH
Confidence 999866543
No 74
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.37 E-value=0.015 Score=55.74 Aligned_cols=83 Identities=10% Similarity=0.022 Sum_probs=64.2
Q ss_pred chhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee----------
Q 016875 25 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI---------- 94 (381)
Q Consensus 25 ~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~---------- 94 (381)
.+...+.+++.+++.|.+...+...+++++.-++++ +.+..|+--....+|++++|++.+.+-.
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 457889999999999999999999999999876543 4667788888888999999998875542
Q ss_pred ------cccchhHHHHH-HHHHHHHH
Q 016875 95 ------DQGWWLGFLIS-SVATLIGL 113 (381)
Q Consensus 95 ------~~g~~~~F~i~-~i~m~~~l 113 (381)
..+|++.|.+- ++..++++
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 14788999854 44344333
No 75
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.33 E-value=0.01 Score=58.65 Aligned_cols=81 Identities=14% Similarity=0.249 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecc-cchhHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-GWWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~-g~~~~F~i 104 (381)
+...++++-.+..+|.|..-+.....+.|.|++ +|......+..+.+.|..+++.+.+++.++. +|+..|.+
T Consensus 96 ~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~ 168 (393)
T PRK09705 96 QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQ-------RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAW 168 (393)
T ss_pred chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccc-------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 345677778888999999888888888887742 2567788888899999999999998888775 89988766
Q ss_pred HHHHHHHHH
Q 016875 105 SSVATLIGL 113 (381)
Q Consensus 105 ~~i~m~~~l 113 (381)
-++..++.+
T Consensus 169 ~~~~~~~~~ 177 (393)
T PRK09705 169 WALPAVVAL 177 (393)
T ss_pred HHHHHHHHH
Confidence 544433333
No 76
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.32 E-value=0.0011 Score=67.53 Aligned_cols=80 Identities=16% Similarity=0.108 Sum_probs=66.1
Q ss_pred HHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHH
Q 016875 32 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLI 111 (381)
Q Consensus 32 ~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~ 111 (381)
+.+.+.+++.+.......++..|+.+ ++++ ......++.|.+.++|.++++.+.+++.+.+||+..|.+.++.+++
T Consensus 125 ~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll 200 (468)
T TIGR00788 125 AFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLL 200 (468)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 36778899999999999999999988 3332 3456778999999999999999999999999999999998877776
Q ss_pred HHHH
Q 016875 112 GLIA 115 (381)
Q Consensus 112 ~l~~ 115 (381)
....
T Consensus 201 ~~~~ 204 (468)
T TIGR00788 201 QLFV 204 (468)
T ss_pred HHHH
Confidence 6443
No 77
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.29 E-value=0.0053 Score=59.35 Aligned_cols=74 Identities=5% Similarity=-0.015 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee----------c
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI----------D 95 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~----------~ 95 (381)
+.+.++++-.+..+|.|.+-+ ..+..+|.+++++ |....+++....|+|..+++.+.+.+.+ +
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGGSFAS-CMPWISFFFPKKI------QGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred hHHHHHHHHHHHHHhchhhHh-HHHHHHHhcCHhh------hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 455666777777888666644 5677788775432 5677788887777777777666554432 3
Q ss_pred ccchhHH-HHHH
Q 016875 96 QGWWLGF-LISS 106 (381)
Q Consensus 96 ~g~~~~F-~i~~ 106 (381)
.+|++.| .+.+
T Consensus 163 ~~w~~~~~~~~~ 174 (366)
T TIGR00886 163 LAWGWAFVIVPA 174 (366)
T ss_pred ccccchhHHHHH
Confidence 4899999 4433
No 78
>PRK09669 putative symporter YagG; Provisional
Probab=97.26 E-value=0.013 Score=58.94 Aligned_cols=49 Identities=10% Similarity=0.123 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhhcC-------chhHHHHHHHHHHHhhcc
Q 016875 331 LFWLSFQYCIFGIADMFTFVGLLEFFYKEAP-------AGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 331 ~~wlv~~y~l~~~~E~~~~~~glef~~~~aP-------~~m~s~~~g~~~l~~a~G 379 (381)
.+.++...++.++++....+...+++.+.++ ++..|+..|++.+..-+|
T Consensus 319 ~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg 374 (444)
T PRK09669 319 VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLG 374 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHH
Confidence 4445556688999999999999999988876 556778888877655443
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.18 E-value=0.0082 Score=59.18 Aligned_cols=44 Identities=11% Similarity=-0.036 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHH
Q 016875 69 SYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 113 (381)
Q Consensus 69 ~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l 113 (381)
..|.+.....|+|..+++.+.+.+.+ .||+..|.+.++..++..
T Consensus 133 ~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~ 176 (396)
T TIGR00882 133 FEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILM 176 (396)
T ss_pred cccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHH
Confidence 46678888899999999999988865 599999988776555544
No 80
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.16 E-value=0.029 Score=55.86 Aligned_cols=83 Identities=16% Similarity=0.157 Sum_probs=63.5
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe------ecccch
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF------IDQGWW 99 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~------~~~g~~ 99 (381)
+...++++-.+..+|.|+.-|.......|-++++ +|.....++..+.++|..+++.+.+++. +..||+
T Consensus 95 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr 168 (412)
T TIGR02332 95 GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAY------FRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQ 168 (412)
T ss_pred CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchh
Confidence 3456777778889999998888877788777642 2677888899999999999998887764 347999
Q ss_pred hHHHHHHHHHHHHHH
Q 016875 100 LGFLISSVATLIGLI 114 (381)
Q Consensus 100 ~~F~i~~i~m~~~l~ 114 (381)
+.|.+.++..++..+
T Consensus 169 ~~f~~~~~~~l~~~~ 183 (412)
T TIGR02332 169 WLFLLEGFPSVILGV 183 (412)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999987665544433
No 81
>PRK09952 shikimate transporter; Provisional
Probab=97.14 E-value=0.046 Score=54.91 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe--------ecccchh
Q 016875 29 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF--------IDQGWWL 100 (381)
Q Consensus 29 ~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~--------~~~g~~~ 100 (381)
.+.+.-.+..+|.|+.-|....+..|.++++. |....+....+.++|.+++..+..++. +++||+.
T Consensus 127 ~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~ 200 (438)
T PRK09952 127 LLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRI 200 (438)
T ss_pred HHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHH
Confidence 35555667889999988888888888776532 455667777888888888866554443 3579999
Q ss_pred HHHHHHHHHHH
Q 016875 101 GFLISSVATLI 111 (381)
Q Consensus 101 ~F~i~~i~m~~ 111 (381)
.|.+.++..++
T Consensus 201 ~f~~~~~~~l~ 211 (438)
T PRK09952 201 PFLFSIVLVLI 211 (438)
T ss_pred HHHHHHHHHHH
Confidence 99988765433
No 82
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.08 E-value=0.078 Score=52.43 Aligned_cols=70 Identities=10% Similarity=0.005 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHH-HHHhhhheeEeecccchhHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA-MIGVTAIVYVFIDQGWWLGFL 103 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa-~~a~~~~~~i~~~~g~~~~F~ 103 (381)
..+++...+..+|.+..-+...+...+.++++ +|.+...++..+.++|. .+++.+.+++.++.||...+.
T Consensus 106 ~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~ 176 (402)
T TIGR00897 106 PLILLFYGIRGLGYPLFAYSFLVWVVYNTKQD------NLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLW 176 (402)
T ss_pred HHHHHHHHHHHcchHHHHhHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 33444444556666655555555555555432 37888899999999996 678888888888888654443
No 83
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.00 E-value=0.026 Score=57.33 Aligned_cols=48 Identities=4% Similarity=0.006 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhhcC-------chhHHHHHHHHHHHhhc
Q 016875 331 LFWLSFQYCIFGIADMFTFVGLLEFFYKEAP-------AGMRTLLLHLHFCHCHL 378 (381)
Q Consensus 331 ~~wlv~~y~l~~~~E~~~~~~glef~~~~aP-------~~m~s~~~g~~~l~~a~ 378 (381)
.++++...++.++++....+....+..+.+| ++..|+..|.+.+..-+
T Consensus 324 ~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~ 378 (473)
T PRK10429 324 ALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG 378 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH
Confidence 4455566688899999999999999999877 56677888888776533
No 84
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.99 E-value=0.051 Score=53.38 Aligned_cols=49 Identities=16% Similarity=0.181 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHH
Q 016875 68 ASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 116 (381)
Q Consensus 68 ~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f 116 (381)
..+-..+.++..+|.+++....+++.+++||+..|.+.++..++..+..
T Consensus 132 ~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 132 AKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 3445556777789999999888899999999999999887776655543
No 85
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=96.92 E-value=0.07 Score=53.24 Aligned_cols=82 Identities=12% Similarity=0.042 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe------------
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF------------ 93 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~------------ 93 (381)
+.+.+.++..+..+|.|...+...+...+.-++++ +.+..++.....++|+.+++.+.+.+.
T Consensus 93 ~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 93 NYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 45677788888999999999988888887654332 445577777888888888888776552
Q ss_pred --------------ecccchhHHHHHHHHHHHHH
Q 016875 94 --------------IDQGWWLGFLISSVATLIGL 113 (381)
Q Consensus 94 --------------~~~g~~~~F~i~~i~m~~~l 113 (381)
+..+|++.|.+.++..++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22579999987666444433
No 86
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.89 E-value=0.001 Score=65.60 Aligned_cols=95 Identities=16% Similarity=-0.024 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 107 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i 107 (381)
..+.++..+..+|.|..-|.......|.+++ +++.+.+.+++...++|..+++.+.+++.++.||+..|.+.++
T Consensus 303 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 376 (399)
T PRK05122 303 WMALIGAALTGFGFSLVFPALGVEAVKRVPP------QNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAAL 376 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 3455566677777777777666666664432 1377899999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhhcccceeecCC
Q 016875 108 ATLIGLIALAIGKPFYRIQQP 128 (381)
Q Consensus 108 ~m~~~l~~f~~g~~~y~~~~p 128 (381)
..+++++.....+++.+++.|
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T PRK05122 377 AALLGLALTWLLYRRAPRAVP 397 (399)
T ss_pred HHHHHHHHHHHhcccccccCC
Confidence 888877766655555554433
No 87
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.84 E-value=0.1 Score=53.35 Aligned_cols=82 Identities=13% Similarity=0.155 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe----e--------
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF----I-------- 94 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~----~-------- 94 (381)
...++++..+..+|.|+.-+....+..+.++++. |....++++...++|.++++.+...+. +
T Consensus 115 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~ 188 (502)
T TIGR00887 115 MATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADE 188 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 4578888889999999999999999999887643 678888888999998888876654321 1
Q ss_pred -----------cccchhHHHHHHHHHHHHHH
Q 016875 95 -----------DQGWWLGFLISSVATLIGLI 114 (381)
Q Consensus 95 -----------~~g~~~~F~i~~i~m~~~l~ 114 (381)
..+|++.|.+.++..++..+
T Consensus 189 ~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~ 219 (502)
T TIGR00887 189 ASCTGSCVPAVDYMWRILIGFGAVPALLALY 219 (502)
T ss_pred ccccccccchhcccHHHHHHHHHHHHHHHHH
Confidence 24899999887766555443
No 88
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.83 E-value=0.0019 Score=52.60 Aligned_cols=85 Identities=18% Similarity=0.175 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
...+.+...+..++.|..-+...+...|.+++++ +....++++...++|..+++.+.+++.+..||+..|.+.+
T Consensus 51 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (141)
T TIGR00880 51 ITVLIIARFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLA 124 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHH
Confidence 4455666677778888888888888888887643 6788899999999999999999999999999999998877
Q ss_pred HHHHHHHHHHh
Q 016875 107 VATLIGLIALA 117 (381)
Q Consensus 107 i~m~~~l~~f~ 117 (381)
+..+++.+...
T Consensus 125 ~~~~~~~~~~~ 135 (141)
T TIGR00880 125 ILALAAFILLA 135 (141)
T ss_pred HHHHHHHHHHh
Confidence 76666655443
No 89
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.75 E-value=0.0038 Score=65.95 Aligned_cols=85 Identities=16% Similarity=0.191 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecc----------
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ---------- 96 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~---------- 96 (381)
...++++-.+.++|.|..-+...+++.|-+++++ +...+.+++.+.++|..+|+++.+++.+.+
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~ 245 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTED 245 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCC
Confidence 4567789999999999999999999988886543 678899999999999999999888765432
Q ss_pred ------------cchhHHHHHHHHHHHHHHHHh
Q 016875 97 ------------GWWLGFLISSVATLIGLIALA 117 (381)
Q Consensus 97 ------------g~~~~F~i~~i~m~~~l~~f~ 117 (381)
+|+.+|.+.++..++..+.++
T Consensus 246 ~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~ 278 (633)
T TIGR00805 246 VILTPTDPRWIGAWWIGFLICGGVALLTSIPFF 278 (633)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 388999987766655544443
No 90
>PRK15075 citrate-proton symporter; Provisional
Probab=96.69 E-value=0.15 Score=51.01 Aligned_cols=73 Identities=15% Similarity=0.195 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeE--------eecccchh
Q 016875 29 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV--------FIDQGWWL 100 (381)
Q Consensus 29 ~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i--------~~~~g~~~ 100 (381)
.+.++-.+..+|.|+.-|+...+..|.+++++ |.....++..+.++|..+++.+...+ .+++||++
T Consensus 119 ~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~ 192 (434)
T PRK15075 119 LVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRI 192 (434)
T ss_pred HHHHHHHHhhccccccHHHHHHHHHhhCCccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHH
Confidence 34566677888888888888889999887543 56677776666666665555444333 35789999
Q ss_pred HHHHHHH
Q 016875 101 GFLISSV 107 (381)
Q Consensus 101 ~F~i~~i 107 (381)
.|.+.++
T Consensus 193 ~f~~~~~ 199 (434)
T PRK15075 193 PFLIGCL 199 (434)
T ss_pred HHHHHHH
Confidence 9987554
No 91
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=96.45 E-value=0.047 Score=55.26 Aligned_cols=86 Identities=12% Similarity=0.014 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecc---cchhHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ---GWWLGF 102 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~---g~~~~F 102 (381)
+...+++...+..+|.|..-|.......|-+++++ |.....++-.+.++|..+++.+..++.+.. +|+..|
T Consensus 121 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f 194 (467)
T PRK09556 121 SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMF 194 (467)
T ss_pred hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHH
Confidence 34556666666778888888888899999887643 567778888899999999988876665543 688888
Q ss_pred HHHHHHHH-HHHHHHh
Q 016875 103 LISSVATL-IGLIALA 117 (381)
Q Consensus 103 ~i~~i~m~-~~l~~f~ 117 (381)
.+.++..+ ++++.+.
T Consensus 195 ~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 195 IFPSIIALIIGFIGLR 210 (467)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 87665443 3444333
No 92
>PRK10133 L-fucose transporter; Provisional
Probab=96.23 E-value=0.15 Score=51.43 Aligned_cols=59 Identities=15% Similarity=0.047 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhhe
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV 90 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~ 90 (381)
+...++++..+..+|.|...+...+++.|..++ + ++....+.+.....+|..+++.+.+
T Consensus 116 ~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~-~-----~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 116 NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPE-S-----SGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCh-h-----hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888999999999999999998875332 2 1233355666666677777766544
No 93
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.19 E-value=0.28 Score=49.04 Aligned_cols=48 Identities=21% Similarity=0.157 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHH-HHhhcc
Q 016875 332 FWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHF-CHCHLA 379 (381)
Q Consensus 332 ~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~-l~~a~G 379 (381)
+.++...++.++++.+..+....++.+..|++.|+..+|+.. ...++|
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg 357 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFG 357 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhH
Confidence 334556689999999999999999999999999999999996 445544
No 94
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=96.17 E-value=0.0045 Score=60.89 Aligned_cols=87 Identities=10% Similarity=0.033 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
...+++...+..++.|...|...+...+..+++ ++.+.+.+++...++|..+++.+.+++.++.||+..|.+.+
T Consensus 311 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~ 384 (408)
T PRK09874 311 PLQLGILRFLLGAADGALLPAVQTLLVYNSSNQ------IAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTA 384 (408)
T ss_pred HHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcc------cceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHH
Confidence 344556666777888888888777765544322 36788899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhhc
Q 016875 107 VATLIGLIALAIG 119 (381)
Q Consensus 107 i~m~~~l~~f~~g 119 (381)
+..+++.+.....
T Consensus 385 ~~~l~~~~~~~~~ 397 (408)
T PRK09874 385 GVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHHHHHHHH
Confidence 8887777655443
No 95
>PRK12382 putative transporter; Provisional
Probab=96.12 E-value=0.0057 Score=60.10 Aligned_cols=86 Identities=13% Similarity=0.080 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 107 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i 107 (381)
...+++..+..+|.|..-|...+...|.++++ +|.+.+.+++...++|..+++.+.+++.|++||+..|.+.++
T Consensus 303 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~ 376 (392)
T PRK12382 303 WVALAGAALTGAGCSLIFPALGVEVVKRVPSQ------VRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAI 376 (392)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 34455566677777777777766666665432 378899999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhhc
Q 016875 108 ATLIGLIALAIG 119 (381)
Q Consensus 108 ~m~~~l~~f~~g 119 (381)
..+++.++.+..
T Consensus 377 ~~~~~~~~~~~~ 388 (392)
T PRK12382 377 SAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHhh
Confidence 888877766543
No 96
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.03 E-value=0.23 Score=50.48 Aligned_cols=80 Identities=18% Similarity=0.185 Sum_probs=59.9
Q ss_pred HHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeec-ccchhHHHHHHHHH
Q 016875 31 YGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLISSVAT 109 (381)
Q Consensus 31 ~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~-~g~~~~F~i~~i~m 109 (381)
.+.-.+-.+|.|..-|++..+.++=.+.++ |..+....+.+..+|.+++.-+++++-+. .||+..|.+.++.-
T Consensus 132 ~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g 205 (466)
T KOG2532|consen 132 LVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVG 205 (466)
T ss_pred HHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHH
Confidence 334455667778888888777776555433 78999999999999999999899999888 99999998866544
Q ss_pred HHHHHHH
Q 016875 110 LIGLIAL 116 (381)
Q Consensus 110 ~~~l~~f 116 (381)
++-.+++
T Consensus 206 ~i~~~~w 212 (466)
T KOG2532|consen 206 LIWFILW 212 (466)
T ss_pred HHHHHHH
Confidence 3333333
No 97
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=95.90 E-value=0.18 Score=51.27 Aligned_cols=80 Identities=11% Similarity=0.103 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe---------eccc
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF---------IDQG 97 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~---------~~~g 97 (381)
...++++..+..+|.|..-+ ....+++.++++ +|......++...|+|+.+++.+.+.+. +..|
T Consensus 124 ~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~------~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~g 196 (476)
T PLN00028 124 ATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGK------IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTA 196 (476)
T ss_pred HHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChh------heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Confidence 34555555566666665433 334566666542 2667777777777887777765554432 1358
Q ss_pred chhHHHHHHHHHHHHH
Q 016875 98 WWLGFLISSVATLIGL 113 (381)
Q Consensus 98 ~~~~F~i~~i~m~~~l 113 (381)
|++.|.+.++..++..
T Consensus 197 Wr~~f~i~g~l~l~~~ 212 (476)
T PLN00028 197 WRIAFFVPGLLHIIMG 212 (476)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 9999998776655443
No 98
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.79 E-value=0.0049 Score=60.56 Aligned_cols=157 Identities=13% Similarity=0.147 Sum_probs=85.9
Q ss_pred chhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhh-ccCC--CcC--Cc-cccCCcccccchHHHHHHHHHHH--H
Q 016875 203 VTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGA-YMDP--RLG--SI-KVPTPSIPVLPLLFMAILIPIYE--F 274 (381)
Q Consensus 203 ~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~-~~d~--~i~--g~-~ip~~~~~~~~~~~ii~~~p~~~--~ 274 (381)
++++++..+.+.....++..-..+...+|.....+.+.+ .+.. ++- .+ .+++-.+-.+-|+.-.+..|+++ .
T Consensus 204 ~~~~k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~ 283 (372)
T PF00854_consen 204 VEELKALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGI 283 (372)
T ss_dssp HHHCCHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT--
T ss_pred eeeeeeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcc
Confidence 566788888888888888888888877776665555553 1211 111 11 13333344444555555555554 1
Q ss_pred HHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHH----HHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhh
Q 016875 275 LFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAG----FVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFV 350 (381)
Q Consensus 275 ~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~----~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~ 350 (381)
-.. ..+|.+ --+....+...++..+-. ... . .......-..+++++|++|+|++.++||.
T Consensus 284 ~~~-~~~k~~---------~G~~~~~~~~~~~~~v~~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~e~~l~~~g~~---- 347 (372)
T PF00854_consen 284 QPS-PPQKFG---------IGMVFAILAMFVAAIVEIRRLCYAQ-P-CGKVSPWWQVPMYIFWLIPEYFLSGTGES---- 347 (372)
T ss_dssp -----HHHHH---------HH-HHHHHHHHTTTHHHH---HH------TT--THHHHHHHHHHHHHHHTTTTHHHH----
T ss_pred cch-hhhhhh---------HHHHHHHHHHHHHHHHHhhhhhccc-c-cCCCChhhHHHHHHHHHHHHHHhhHHHHH----
Confidence 111 122332 122222222222222221 111 0 00111100147899999999999999999
Q ss_pred hhHHHHHhhcCchhHHHHHHHHHHH
Q 016875 351 GLLEFFYKEAPAGMRTLLLHLHFCH 375 (381)
Q Consensus 351 ~glef~~~~aP~~m~s~~~g~~~l~ 375 (381)
.++|++++++|++|||+.++++.++
T Consensus 348 ~~~~~a~~~~p~~m~~~~~~~~~~~ 372 (372)
T PF00854_consen 348 AAYEFAPSRAPSSMMGIWFALSAFS 372 (372)
T ss_dssp HHHHHTTTT-SSSSTHHHHHHH---
T ss_pred HHHHhhHHhhhHHHHHHHHHHhccC
Confidence 9999999999999999999998753
No 99
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=95.75 E-value=1.4 Score=46.09 Aligned_cols=86 Identities=14% Similarity=0.110 Sum_probs=50.4
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+...+..|..+..+|.|...- ....++|..+.+. |-.++.+..+..-+....++.+...+..+.+|+|+|.+.
T Consensus 130 ~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~ 202 (599)
T PF06609_consen 130 NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIF 202 (599)
T ss_pred cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHH
Confidence 455677788888899887653 3445677764321 222222222222222223444443444567999999999
Q ss_pred HHHHHHHHHHHhh
Q 016875 106 SVATLIGLIALAI 118 (381)
Q Consensus 106 ~i~m~~~l~~f~~ 118 (381)
++...++++...+
T Consensus 203 ~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 203 IIWSGIALVLIFF 215 (599)
T ss_pred HHHHHHHHHHHHH
Confidence 9887777765444
No 100
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=95.74 E-value=1.4 Score=43.73 Aligned_cols=50 Identities=18% Similarity=0.212 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.+-+.+.-+++|++--+..+..+...-+.++++..|+.||+|-...+++
T Consensus 300 ~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A 349 (403)
T PF03209_consen 300 SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIA 349 (403)
T ss_pred cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHH
Confidence 35667788899999999999999999999999999999999999988764
No 101
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=95.59 E-value=0.019 Score=54.34 Aligned_cols=85 Identities=19% Similarity=0.163 Sum_probs=73.6
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
....++...+..++.+...+...+...|.++++ +|.+.+..+....++|..+++.+.+++.++.||+..|.+.+
T Consensus 265 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~ 338 (352)
T cd06174 265 LALLLVALLLLGFGLGFAFPALLTLASELAPPE------ARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILA 338 (352)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHH
Confidence 456677788889999999999999999888753 37889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 016875 107 VATLIGLIALA 117 (381)
Q Consensus 107 i~m~~~l~~f~ 117 (381)
+..+++.+.+.
T Consensus 339 ~~~~i~~i~~~ 349 (352)
T cd06174 339 ALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHhe
Confidence 88888777654
No 102
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=95.36 E-value=0.016 Score=55.71 Aligned_cols=77 Identities=19% Similarity=0.336 Sum_probs=60.8
Q ss_pred HHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHH
Q 016875 32 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLI 111 (381)
Q Consensus 32 ~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~ 111 (381)
....+..++.|..-+...++..|.+++++ +.+.+.+++...++|..+++.+.+++.++.||+..|.+.++..++
T Consensus 300 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 300 ATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALT 373 (377)
T ss_pred HHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHH
Confidence 34455566667666666677777776432 678889999999999999999999999999999999998887776
Q ss_pred HHH
Q 016875 112 GLI 114 (381)
Q Consensus 112 ~l~ 114 (381)
+++
T Consensus 374 ~~~ 376 (377)
T TIGR00890 374 SLA 376 (377)
T ss_pred hcc
Confidence 653
No 103
>TIGR00893 2A0114 d-galactonate transporter.
Probab=95.13 E-value=0.046 Score=52.58 Aligned_cols=71 Identities=15% Similarity=0.065 Sum_probs=58.3
Q ss_pred ccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeeccc-chhHHHHHHHHHHHHHHHHh
Q 016875 41 CGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALA 117 (381)
Q Consensus 41 ~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g-~~~~F~i~~i~m~~~l~~f~ 117 (381)
.++.-+...++..|.+++++ |...+.++....++|+.+++.+.+++.|..| |...|.+.++..+++.+.++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 325 GLGAGAIGWALISDNAPGNI------AGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred chhhhhHHHHHHHhhcChhH------HHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 33367888888888876543 6789999999999999999999999999998 99999988887777766554
No 104
>PRK03545 putative arabinose transporter; Provisional
Probab=95.01 E-value=0.17 Score=49.72 Aligned_cols=70 Identities=19% Similarity=0.095 Sum_probs=53.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHH
Q 016875 295 RVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFC 374 (381)
Q Consensus 295 ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l 374 (381)
-+.+++++.+++.+..+.. -+.++++...+++|+++....+....++.+..|++.|+.++|++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~ 140 (390)
T PRK03545 76 LLIGLFVLFIASHVLSALA---------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLAT 140 (390)
T ss_pred HHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHH
Confidence 3445666666655443322 2467777778899999999999999999999999999999999887
Q ss_pred Hhhcc
Q 016875 375 HCHLA 379 (381)
Q Consensus 375 ~~a~G 379 (381)
..++|
T Consensus 141 ~~~~g 145 (390)
T PRK03545 141 GTALA 145 (390)
T ss_pred HHHHH
Confidence 66654
No 105
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=94.99 E-value=0.028 Score=56.86 Aligned_cols=86 Identities=14% Similarity=0.057 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecc-cchhHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-GWWLGFLIS 105 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~-g~~~~F~i~ 105 (381)
...+++...+..++.|..-++..++..|.++++ ++...+..+....++|..+++.+.+++.+.. +|...|.++
T Consensus 333 ~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~ 406 (455)
T TIGR00892 333 YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ------RFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYAS 406 (455)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH------HHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHh
Confidence 345556666777888888888888888877543 2678889999999999999999999999987 599999998
Q ss_pred HHHHHHHHHHHhh
Q 016875 106 SVATLIGLIALAI 118 (381)
Q Consensus 106 ~i~m~~~l~~f~~ 118 (381)
++.++++.+....
T Consensus 407 ~~~~li~~~~~~~ 419 (455)
T TIGR00892 407 GSIVVSAGLFLAI 419 (455)
T ss_pred hHHHHHHHHHHHH
Confidence 8877776654433
No 106
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=94.96 E-value=0.37 Score=47.38 Aligned_cols=50 Identities=12% Similarity=0.147 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.++++...++.|++.....+.....+.+..|++.|+..+|++.....+|
T Consensus 102 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 151 (406)
T PRK11551 102 DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFG 151 (406)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 46777778899999999999999999999999999999999988766554
No 107
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=94.94 E-value=2.3 Score=42.23 Aligned_cols=87 Identities=23% Similarity=0.204 Sum_probs=69.9
Q ss_pred chhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHH
Q 016875 25 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLI 104 (381)
Q Consensus 25 ~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i 104 (381)
.+...+.++=.+.++..|.|-+-..+...|.-++++ |.++...-+.+..++-.+|.=+..++.|.+||+..|.+
T Consensus 99 p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ 172 (394)
T COG2814 99 PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLA 172 (394)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHH
Confidence 456777788888888889999999999998887643 78899999999999998888888899999999999987
Q ss_pred HHHHHHHHHHHHh
Q 016875 105 SSVATLIGLIALA 117 (381)
Q Consensus 105 ~~i~m~~~l~~f~ 117 (381)
-++.-+++++..+
T Consensus 173 ia~l~ll~~~~~~ 185 (394)
T COG2814 173 IAVLALLALLLLW 185 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 6654444444333
No 108
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=94.93 E-value=0.2 Score=49.78 Aligned_cols=50 Identities=20% Similarity=0.107 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 331 LFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 331 ~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
.++++...++.|++|....|....++.+..|++.|+..+|++....++|+
T Consensus 96 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~ 145 (412)
T TIGR02332 96 PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTM 145 (412)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 66778888999999999999999999999999999999999988776653
No 109
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=94.89 E-value=0.021 Score=57.11 Aligned_cols=85 Identities=12% Similarity=0.084 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHH-HHHHHHHHHHhhhheeEeec------ccchh
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-FATTLAAMIGVTAIVYVFID------QGWWL 100 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY-~~iNiGa~~a~~~~~~i~~~------~g~~~ 100 (381)
..++++..+..++.|..-+....++.|.++++ .+.+.+.+++ +..++|+.+++.+.+++.|+ +||+.
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~------~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~ 382 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVH------IRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQT 382 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHH
Confidence 34556666777778888888888888887743 3788899997 56789999999999999887 46999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 016875 101 GFLISSVATLIGLIALAI 118 (381)
Q Consensus 101 ~F~i~~i~m~~~l~~f~~ 118 (381)
.|.++++..+++.+.+..
T Consensus 383 ~f~~~~~~~~i~~~l~~~ 400 (418)
T TIGR00889 383 MWLFFAGYIAILAVLFMI 400 (418)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 998877665555544433
No 110
>PRK03633 putative MFS family transporter protein; Provisional
Probab=94.81 E-value=0.034 Score=54.53 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=55.7
Q ss_pred HHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHH
Q 016875 32 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLI 111 (381)
Q Consensus 32 ~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~ 111 (381)
.++.+..++.+..-|...+...|+.++++ +.+....+..+.++|..+++.+.+++.|++||.+.|.+.+...++
T Consensus 290 ~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 290 PALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFI 363 (381)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 34445555555566777777777664422 345666777888999999999999999999999999987766655
Q ss_pred HHH
Q 016875 112 GLI 114 (381)
Q Consensus 112 ~l~ 114 (381)
+.+
T Consensus 364 ~~~ 366 (381)
T PRK03633 364 YLL 366 (381)
T ss_pred HHH
Confidence 543
No 111
>PRK11462 putative transporter; Provisional
Probab=94.80 E-value=1.8 Score=43.81 Aligned_cols=80 Identities=18% Similarity=0.119 Sum_probs=47.2
Q ss_pred HHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee-------cccchhHH
Q 016875 30 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI-------DQGWWLGF 102 (381)
Q Consensus 30 ~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~-------~~g~~~~F 102 (381)
+++...+..++.-++.-...+++++.-+| ++ +|.+..+|.-.+.++|.++++.+...+-+ ..||....
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d--~~---eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~ 186 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITND--PT---QRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGI 186 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCC--HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH
Confidence 33333344556666666667777776655 33 37788888888889888777665432211 13566665
Q ss_pred HHHHHHHHHHHH
Q 016875 103 LISSVATLIGLI 114 (381)
Q Consensus 103 ~i~~i~m~~~l~ 114 (381)
.+.++..++...
T Consensus 187 ~i~~ii~~i~~~ 198 (460)
T PRK11462 187 AVLSVVAFMMLA 198 (460)
T ss_pred HHHHHHHHHHHH
Confidence 555544444443
No 112
>PRK10489 enterobactin exporter EntS; Provisional
Probab=94.66 E-value=0.032 Score=55.39 Aligned_cols=80 Identities=13% Similarity=-0.098 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHH
Q 016875 29 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVA 108 (381)
Q Consensus 29 ~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~ 108 (381)
...+++.+..+|.|...+...++..|..+++ .|.+.+.+++...++|..+++.+.+++.+.+|+...|.+.+++
T Consensus 314 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~ 387 (417)
T PRK10489 314 LAVLCLALFGYLSAISSLLQYTLLQTQTPDE------MLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFG 387 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH------HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHH
Confidence 3444555566666666566666666666532 3678899999999999999999999999999999888866655
Q ss_pred HHHHHH
Q 016875 109 TLIGLI 114 (381)
Q Consensus 109 m~~~l~ 114 (381)
..+..+
T Consensus 388 ~~~~~~ 393 (417)
T PRK10489 388 LLIIGV 393 (417)
T ss_pred HHHHHH
Confidence 444333
No 113
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=94.36 E-value=1.4 Score=43.93 Aligned_cols=70 Identities=11% Similarity=0.296 Sum_probs=55.1
Q ss_pred cccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh--eeEeecccchhHHHHHHH-HHHHHHHHHhhccc
Q 016875 46 GTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI--VYVFIDQGWWLGFLISSV-ATLIGLIALAIGKP 121 (381)
Q Consensus 46 ~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~--~~i~~~~g~~~~F~i~~i-~m~~~l~~f~~g~~ 121 (381)
|...-.++.=|.+++ |.+..+.+-.+.|+|+.+.+.++ +++..+.+|+.+|..|++ +++++++.+..+|.
T Consensus 136 pp~~~~i~~Wfsr~e------RG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 136 PPCARTITHWFSRKE------RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred cHHHHHHHHHcCccc------cCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 555556666665533 77888889999999999999998 899999999999999874 56777777776654
No 114
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.31 E-value=0.052 Score=53.40 Aligned_cols=107 Identities=16% Similarity=0.109 Sum_probs=81.6
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.++++++=.+=++|..+...+-.++.+|-|.|+.. |.+...+---++.+|.++||-+.+.+-|..|+.+-|++.
T Consensus 158 sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL 232 (464)
T KOG3764|consen 158 SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVL 232 (464)
T ss_pred hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHH
Confidence 466778888888899999999999999999988653 566777777778999999999999999999999999998
Q ss_pred HHHHHHHHH-HHhhcccceeec--CCCCCchhhHH
Q 016875 106 SVATLIGLI-ALAIGKPFYRIQ--QPGESPLVRVA 137 (381)
Q Consensus 106 ~i~m~~~l~-~f~~g~~~y~~~--~p~g~pl~~~~ 137 (381)
++.+++... .|+.-.+.-.++ .+++.|..++.
T Consensus 233 ~~v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll 267 (464)
T KOG3764|consen 233 AIVLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLL 267 (464)
T ss_pred HHHHHHHHHHHHheeCccccCccccccCccHHHHH
Confidence 877766554 444444422222 35566666554
No 115
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=94.26 E-value=0.42 Score=46.48 Aligned_cols=51 Identities=10% Similarity=0.070 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+.+++....++.|+++....+....++.+..|++.|+..+|++....++|.
T Consensus 99 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~ 149 (405)
T TIGR00891 99 GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGA 149 (405)
T ss_pred cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHH
Confidence 456677788999999999999999999999999999999999887766653
No 116
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=93.96 E-value=0.26 Score=49.42 Aligned_cols=103 Identities=16% Similarity=0.350 Sum_probs=75.9
Q ss_pred cccCCcccccchHH---HHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCc
Q 016875 251 KVPTPSIPVLPLLF---MAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPK 327 (381)
Q Consensus 251 ~ip~~~~~~~~~~~---ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~ 327 (381)
++.++....+.+.+ -+++.|++..+- .|+ +..+=|++|.++-.++.+..+..
T Consensus 64 ni~~s~~Gll~~vf~v~~~i~sPl~gyLa----dry-------NR~~v~~vG~~iW~~Av~~~~fs-------------- 118 (493)
T KOG1330|consen 64 NISDSELGLLQTVFIVVFMIASPLFGYLA----DRY-------NRKRVIAVGIFIWTLAVFASGFS-------------- 118 (493)
T ss_pred CCCchhccchhHHHHHHHHHHHHHHHHHH----hhc-------CcceEEeeHHHHHHHHHHHHHHH--------------
Confidence 34444444444444 446677777642 343 33456888988888877654322
Q ss_pred cchHHHHH-HHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 328 QISLFWLS-FQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 328 ~~s~~wlv-~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+-+||+ ..=-+.|+||.-.+|..-.++.+..|+..||.++|+|+++.-+|+
T Consensus 119 --~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGs 170 (493)
T KOG1330|consen 119 --NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGS 170 (493)
T ss_pred --HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhccccc
Confidence 456666 567899999999999999999999999999999999999987775
No 117
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=93.91 E-value=0.069 Score=51.64 Aligned_cols=82 Identities=10% Similarity=-0.008 Sum_probs=60.2
Q ss_pred HHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHH
Q 016875 30 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVAT 109 (381)
Q Consensus 30 ~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m 109 (381)
++....+..++.|..-+...+...|..++ ++.+.+..++...++|..+++.+.+++.+..||+..|.+.++..
T Consensus 291 ~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~ 363 (375)
T TIGR00899 291 LLMLQLLNAIFIGILAGIGMLYFQDLMPG-------RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVML 363 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 33334444556666555555555554432 14588899999999999999999999999999999999998888
Q ss_pred HHHHHHHhh
Q 016875 110 LIGLIALAI 118 (381)
Q Consensus 110 ~~~l~~f~~ 118 (381)
+++.+..+.
T Consensus 364 ~~~~~~~~~ 372 (375)
T TIGR00899 364 IVALFCLLL 372 (375)
T ss_pred HHHHHHHhe
Confidence 887776543
No 118
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=93.71 E-value=0.13 Score=51.94 Aligned_cols=76 Identities=17% Similarity=0.012 Sum_probs=57.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHH
Q 016875 295 RVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFC 374 (381)
Q Consensus 295 ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l 374 (381)
-+.+++++.+++.+..+.... . ..-+.+.++...++.|++|-+..|.....+.+..|++.|+..+|++..
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~ 165 (467)
T PRK09556 96 FLPFLLILSAICMLGFGASLG-----S-----GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNI 165 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHh-----c-----ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeec
Confidence 456677666666554443320 0 123567777888999999999999999999999999999999999887
Q ss_pred HhhccC
Q 016875 375 HCHLAT 380 (381)
Q Consensus 375 ~~a~G~ 380 (381)
...+|.
T Consensus 166 ~~~lG~ 171 (467)
T PRK09556 166 SHNLGG 171 (467)
T ss_pred ccchhh
Confidence 766654
No 119
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.52 E-value=0.21 Score=50.32 Aligned_cols=84 Identities=20% Similarity=0.098 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 107 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i 107 (381)
....+.+.+..+|.....-..-++..|.-++++. .+...-++.|...++|++++..+.+++.++.+++..|.++++
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~----~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~ 162 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPE----SRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAA 162 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc----hhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHH
Confidence 3444455666677777766676777766544332 145566888999999999999999999999999999998876
Q ss_pred HHHHHHHH
Q 016875 108 ATLIGLIA 115 (381)
Q Consensus 108 ~m~~~l~~ 115 (381)
...+.++.
T Consensus 163 ~~~l~~~~ 170 (433)
T PF03092_consen 163 LPLLMLIV 170 (433)
T ss_pred HHHHHHHH
Confidence 66555443
No 120
>PRK12307 putative sialic acid transporter; Provisional
Probab=93.40 E-value=1.3 Score=43.81 Aligned_cols=97 Identities=9% Similarity=0.128 Sum_probs=66.6
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHH
Q 016875 257 IPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSF 336 (381)
Q Consensus 257 ~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~ 336 (381)
..+...+...+..|+...+ .+|.+++ +=+.+|.++.+++.+..+.. -+.++++.
T Consensus 58 ~~~~~~~~~~l~~~~~g~l----~dr~g~r-------~~l~~~~~~~~~~~~~~~~~---------------~~~~~l~~ 111 (426)
T PRK12307 58 LATAAFIGRPFGGALFGLL----ADKFGRK-------PLMMWSIVAYSVGTGLSGLA---------------SGVIMLTL 111 (426)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHhCCh-------HHHHHHHHHHHHHHHHHHHH---------------hHHHHHHH
Confidence 3444445555555555544 3555431 22445666666665544322 13667777
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 337 QYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 337 ~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
..++.|+++....+....++.+..|++.|+..+|++....++|
T Consensus 112 ~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 154 (426)
T PRK12307 112 SRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIG 154 (426)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHH
Confidence 8899999999999999999999999999999999988776665
No 121
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=93.31 E-value=1.4 Score=47.45 Aligned_cols=50 Identities=10% Similarity=-0.010 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.++++...++.|++.....|....++...+|++.|+..++++....++|
T Consensus 254 s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG 303 (742)
T TIGR01299 254 GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIG 303 (742)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 36677778899999999999999999999999999999998876665554
No 122
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=93.27 E-value=0.9 Score=45.65 Aligned_cols=100 Identities=13% Similarity=0.056 Sum_probs=68.5
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHH
Q 016875 255 PSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWL 334 (381)
Q Consensus 255 ~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wl 334 (381)
.+..+...+..++..|+..++. +|.+++ +-+.+|.++.+++.+..+. .-+.+++
T Consensus 40 ~~~~~~~~~~~~~~~~~~g~l~----dr~g~r-------~~~~~~~~~~~~~~~~~~~---------------~~~~~~l 93 (485)
T TIGR00711 40 QWVITSYMLANAISIPLTGWLA----KRFGTR-------RLFLISTFAFTLGSLLCGV---------------APNLELM 93 (485)
T ss_pred hHHHHHHHHHHHHHHHhHHHHH----HHhCcH-------HHHHHHHHHHHHHHHHHhC---------------cCCHHHH
Confidence 3445555566666666666543 454321 1234555555554443321 1246677
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 335 SFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 335 v~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+...++.|++.....+.....+.+..|++.|+..+|++.....+|.
T Consensus 94 ~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 139 (485)
T TIGR00711 94 IIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAP 139 (485)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHh
Confidence 7888999999999999999999999999999999999988776653
No 123
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=93.22 E-value=0.11 Score=51.34 Aligned_cols=78 Identities=12% Similarity=0.017 Sum_probs=60.2
Q ss_pred HHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeeccc-chhHHHHHHHHHHHHHH
Q 016875 36 LYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLI 114 (381)
Q Consensus 36 lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g-~~~~F~i~~i~m~~~l~ 114 (381)
+..+|.|..-|+......|++++++ .+.+.+++.+...++++.+++.+.+++.|+.| |..+|.+.++.++++++
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 4556777777776666666664322 36778999999999999999999999999886 88999998887777766
Q ss_pred HHhh
Q 016875 115 ALAI 118 (381)
Q Consensus 115 ~f~~ 118 (381)
..+.
T Consensus 376 ~~~~ 379 (393)
T PRK09705 376 ITLR 379 (393)
T ss_pred HHHH
Confidence 6544
No 124
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=93.16 E-value=1.1 Score=35.93 Aligned_cols=49 Identities=18% Similarity=0.162 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 331 LFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 331 ~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
.++.....++.+++.-...+.....+.+..|++.++..++++.....+|
T Consensus 51 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 99 (141)
T TIGR00880 51 ITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALG 99 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHH
Confidence 5566667899999999999999999999999999999999988776554
No 125
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=92.97 E-value=0.15 Score=50.55 Aligned_cols=67 Identities=15% Similarity=-0.013 Sum_probs=52.0
Q ss_pred ccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHHh
Q 016875 45 RGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 117 (381)
Q Consensus 45 k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f~ 117 (381)
-++...+..|.++++ .|.......+...|+|+++++.+.+++.++.||.+.|.+.++..+++.++..
T Consensus 401 ~~~~~~~~~~~~p~~------~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 401 GPVPWVIVSEIFPLS------LRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred cCeehhhhhccCChH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHh
Confidence 466666667777643 2677888899999999999999999999999999999877766655555443
No 126
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=92.88 E-value=0.93 Score=43.79 Aligned_cols=50 Identities=10% Similarity=-0.089 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.++++...++.|+++....+....++.+..|++.|+..+|++.....+|
T Consensus 92 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 141 (385)
T TIGR00710 92 NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALA 141 (385)
T ss_pred cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 36667778899999999999999999999999999999999887776554
No 127
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=92.70 E-value=1.1 Score=44.22 Aligned_cols=69 Identities=9% Similarity=0.082 Sum_probs=53.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHH
Q 016875 296 VGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCH 375 (381)
Q Consensus 296 i~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~ 375 (381)
+.+|.++.+++++..+.. -+.+|+....++.|+++.+..|.....+.+.+|++.++..+|+....
T Consensus 79 l~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 143 (400)
T PRK11646 79 IVTGMLMRAAGFATMAIA---------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQ 143 (400)
T ss_pred HHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 445666666666544321 14677788889999999999999999999999999999999998777
Q ss_pred hhcc
Q 016875 376 CHLA 379 (381)
Q Consensus 376 ~a~G 379 (381)
..+|
T Consensus 144 ~~~g 147 (400)
T PRK11646 144 DSAG 147 (400)
T ss_pred HHHH
Confidence 6655
No 128
>PRK11663 regulatory protein UhpC; Provisional
Probab=92.58 E-value=1.6 Score=43.64 Aligned_cols=70 Identities=13% Similarity=0.145 Sum_probs=51.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHH
Q 016875 296 VGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCH 375 (381)
Q Consensus 296 i~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~ 375 (381)
+.+++++.+++.+..+.. -+.+.++...++.++++....+.....+.+..|++.|+..+|++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 155 (434)
T PRK11663 91 MGIGLIATGIINILFGFS---------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTA 155 (434)
T ss_pred HHHHHHHHHHHHHHHHHH---------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 456666666655433321 13445556677889999888999999999999999999999999877
Q ss_pred hhccC
Q 016875 376 CHLAT 380 (381)
Q Consensus 376 ~a~G~ 380 (381)
..+|+
T Consensus 156 ~~~g~ 160 (434)
T PRK11663 156 HNVGG 160 (434)
T ss_pred HHHHH
Confidence 76653
No 129
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=92.39 E-value=11 Score=38.46 Aligned_cols=57 Identities=12% Similarity=-0.060 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhh
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 89 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~ 89 (381)
+...+++.-.+..+| |..-+.....+.+.|++++ +.....++-...|+|..++..+.
T Consensus 127 s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 127 PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGINGGLGNLGVSVMQLVA 183 (462)
T ss_pred CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHHHHHHHhhHHHHHHHHH
Confidence 345666666677777 4444666677888886533 56677777666677766554444
No 130
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=92.31 E-value=1.8 Score=42.75 Aligned_cols=94 Identities=14% Similarity=0.022 Sum_probs=64.5
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHH
Q 016875 260 LPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYC 339 (381)
Q Consensus 260 ~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~ 339 (381)
...+...+..|+...+ .+|.++ -+-+.+++++.+++.+..+. .-+.++++..-+
T Consensus 63 ~~~~~~~~~~~~~g~l----~Dr~gr-------r~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~r~ 116 (394)
T PRK10213 63 VTAFVAMFASLFITQT----IQATDR-------RYVVILFAVLLTLSCLLVSF---------------ANSFSLLLIGRA 116 (394)
T ss_pred HHHHHHHHHHHHHHHH----hcccCc-------HHHHHHHHHHHHHHHHHHHH---------------HChHHHHHHHHH
Confidence 3444444555555543 345432 12345666666665543321 124777778889
Q ss_pred HHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 340 IFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 340 l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.|++.....|.....+.+..|++.++..+|++....++|
T Consensus 117 l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g 156 (394)
T PRK10213 117 CLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIA 156 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988766554
No 131
>PRK09528 lacY galactoside permease; Reviewed
Probab=92.31 E-value=0.086 Score=52.37 Aligned_cols=84 Identities=15% Similarity=-0.010 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHH-HHHHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF-YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~-fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
+.++....+..++.+..-+....++.+.++++. +...+.. +.+..++|+.+++.+.+++.|..||+..|.+.+
T Consensus 316 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~ 389 (420)
T PRK09528 316 LEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILG 389 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHH
Confidence 344444555566666666666566666665422 3334444 556788999999999999999999999999877
Q ss_pred HHHHHHHHHHh
Q 016875 107 VATLIGLIALA 117 (381)
Q Consensus 107 i~m~~~l~~f~ 117 (381)
+..+++.++.+
T Consensus 390 ~~~~i~~~~~~ 400 (420)
T PRK09528 390 GIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHH
Confidence 66655554443
No 132
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=92.16 E-value=1.9 Score=40.88 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=66.3
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHH
Q 016875 257 IPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSF 336 (381)
Q Consensus 257 ~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~ 336 (381)
+.+...+...+..|+...+. +|.++ -+=+.+|.++.+++.+...+. . +.++++.
T Consensus 37 ~~~~~~~~~~~~~~~~g~l~----dr~g~-------r~~l~~~~~~~~~~~~~~~~~---------~------~~~~~~~ 90 (352)
T PF07690_consen 37 LFSAFFLGSALFSPFAGYLS----DRFGR-------RRVLIIGLLLFALGSLLLAFA---------S------NFWLLLI 90 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HHS-H-------HHHHHHHHHHHHHHHHHHHHH---------C------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHcCC-------eeeEeehhhhhhhHHHHhhhh---------h------hHHHHhh
Confidence 33344444555555555543 45432 123455666666663333211 1 2457888
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 337 QYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 337 ~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
..++.|+++....+....++.+..|++.|+..+|++.....+|.
T Consensus 91 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~ 134 (352)
T PF07690_consen 91 ARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGS 134 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccccccccccchhhhhhhccccccchhhhhh
Confidence 88999999999999999999999999999999999988877653
No 133
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=91.94 E-value=1.9 Score=42.96 Aligned_cols=102 Identities=11% Similarity=0.013 Sum_probs=68.1
Q ss_pred cccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHH
Q 016875 256 SIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLS 335 (381)
Q Consensus 256 ~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv 335 (381)
++++...+...+..|...++ .+|.++| +-+.+|+++.+++.+...... ..-+.++++
T Consensus 42 ~l~s~~~~g~~i~~~~~g~l----~~r~G~r-------~~~~~g~~l~~~g~~l~~~~~------------~~~~~~~~l 98 (410)
T TIGR00885 42 LVQSAFYGGYFIMAIPAAIF----MKKLSYK-------AGILLGLFLYALGAFLFWPAA------------EIMNYTLFL 98 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHhCch-------HHHHHHHHHHHHHHHHHHHHH------------hhccHHHHH
Confidence 34445555566666666554 3565432 245667777777665432111 012456667
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 336 FQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 336 ~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
...++.|++.-+..+....++.+.+|++.++..+++.....++|+
T Consensus 99 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~ 143 (410)
T TIGR00885 99 VGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGS 143 (410)
T ss_pred HHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHH
Confidence 778999999999999999999999999999998888777666553
No 134
>PRK10091 MFS transport protein AraJ; Provisional
Probab=91.88 E-value=1.9 Score=42.19 Aligned_cols=97 Identities=14% Similarity=0.032 Sum_probs=64.9
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHH
Q 016875 257 IPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSF 336 (381)
Q Consensus 257 ~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~ 336 (381)
..+.+.+..++..|+..++ .+|.++| +-+.+|.++.+++.+..+.. -+.++++.
T Consensus 43 ~~s~~~~~~~~~~~~~g~l----~dr~g~r-------~~~~~~~~~~~~~~~l~~~~---------------~~~~~l~~ 96 (382)
T PRK10091 43 MISYYALGVVVGAPIIALF----SSRYSLK-------HILLFLVALCVIGNAMFTLS---------------SSYLMLAI 96 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH----HccCccH-------HHHHHHHHHHHHHHHHHHHh---------------CcHHHHHH
Confidence 4445555566666666654 3554321 23455666666555443321 24677777
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 337 QYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 337 ~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
..++.|+++....+.....+.+..|++.|+..+|++.....+|
T Consensus 97 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 139 (382)
T PRK10091 97 GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVA 139 (382)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHH
Confidence 8899999999988888888999999999999999877655443
No 135
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=91.85 E-value=2.3 Score=42.67 Aligned_cols=73 Identities=15% Similarity=0.138 Sum_probs=53.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHH
Q 016875 296 VGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCH 375 (381)
Q Consensus 296 i~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~ 375 (381)
+.+|.++.+++.+..++.. . ..-+.++++...++.|+++....|.....+.+..|++.|+..+|++...
T Consensus 96 l~~~~~~~~i~~~~~~~~~--------~---~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 164 (452)
T PRK11273 96 LPAGLILAAAVMLFMGFVP--------W---ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCA 164 (452)
T ss_pred HHHHHHHHHHHHHHHHhhh--------c---ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 4556666666665554332 0 0124566677788999999988887778888899999999999998887
Q ss_pred hhcc
Q 016875 376 CHLA 379 (381)
Q Consensus 376 ~a~G 379 (381)
..+|
T Consensus 165 ~~~g 168 (452)
T PRK11273 165 HNVG 168 (452)
T ss_pred HHhh
Confidence 7665
No 136
>PRK15011 sugar efflux transporter B; Provisional
Probab=91.54 E-value=0.24 Score=48.81 Aligned_cols=52 Identities=15% Similarity=0.061 Sum_probs=44.2
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHHhh
Q 016875 67 LASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 118 (381)
Q Consensus 67 ~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f~~ 118 (381)
+.....++....|+|..+++.+.+++.|..||+..|.++++..+++++..+.
T Consensus 338 ~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 338 AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 5667778888889999999999999999999999999888888777766653
No 137
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=91.42 E-value=1.8 Score=43.23 Aligned_cols=45 Identities=9% Similarity=0.146 Sum_probs=38.0
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHH
Q 016875 329 ISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHF 373 (381)
Q Consensus 329 ~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~ 373 (381)
.+++|+++.=.|+++---+..+..+.+++++.|+++.+.+..+.+
T Consensus 310 ~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~ 354 (412)
T PF01306_consen 310 TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGF 354 (412)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHH
Confidence 458888888899999988999999999999999999988777653
No 138
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=91.18 E-value=2.7 Score=42.82 Aligned_cols=99 Identities=16% Similarity=0.049 Sum_probs=67.1
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHH
Q 016875 255 PSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWL 334 (381)
Q Consensus 255 ~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wl 334 (381)
.|..+...+...+..|+..++. +|.+++ +-+.+|.++.+++.+..+.. -+.+++
T Consensus 44 ~~~~~~~~l~~~~~~~~~G~l~----D~~Grk-------~~l~~~~~~~~~~~~~~~~a---------------~~~~~l 97 (495)
T PRK14995 44 LWIIDIYSLVMAGMVLPMGALG----DRIGFK-------RLLMLGGTLFGLASLAAAFS---------------PTASWL 97 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHhccH-------HHHHHHHHHHHHHHHHHHHc---------------CCHHHH
Confidence 4444555555566667666554 454421 23455666666665544321 247777
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhh-cCchhHHHHHHHHHHHhhcc
Q 016875 335 SFQYCIFGIADMFTFVGLLEFFYKE-APAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 335 v~~y~l~~~~E~~~~~~glef~~~~-aP~~m~s~~~g~~~l~~a~G 379 (381)
+...+++|++.....|.......+. .|++.|+..+|++.....+|
T Consensus 98 i~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g 143 (495)
T PRK14995 98 IATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGG 143 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999888877776 57899999999988877665
No 139
>TIGR00895 2A0115 benzoate transport.
Probab=91.03 E-value=1.2 Score=43.01 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.++++...++.|++.....+.....+.+..|++.|+..+|++.....+|
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 153 (398)
T TIGR00895 104 NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIG 153 (398)
T ss_pred chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHH
Confidence 35567777899999999999999999999999999999999887766554
No 140
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=91.02 E-value=2.5 Score=40.21 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=67.1
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHH
Q 016875 257 IPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSF 336 (381)
Q Consensus 257 ~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~ 336 (381)
+.+...+..++..|+...+ .+|.++| +-+.++.++.+++.+..+.... .. ..+.+++..
T Consensus 39 ~~~~~~~~~~i~~~~~G~l----~dr~g~r-------~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~ 97 (365)
T TIGR00900 39 AALAGMLPYVVLSPIAGAL----ADRYDRK-------KVMIGADLIRAVLVAVLPFVAL-----LG-----GLNIWQVYV 97 (365)
T ss_pred HHHHHHHHHHHHHHhhhHH----HHhhchh-------HHHHHHHHHHHHHHHHHHHHHH-----cC-----CCcHHHHHH
Confidence 3444445555556665554 3554421 1233455555554444433321 11 235777788
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 337 QYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 337 ~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
..++.|++..+..+....++.+..|++.|+..+|.+.....+|
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 140 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLF 140 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHH
Confidence 8899999999999999999999999999999999888777665
No 141
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=90.73 E-value=0.2 Score=51.11 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=72.2
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.+.+...++.+|..+.-|...++..++-+++ .|......++.+..+|..++..+.....+..+|..-|+..
T Consensus 380 s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~------~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 453 (475)
T TIGR00924 380 SPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQR------LMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKI 453 (475)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHH
Confidence 4566677778888888888888888888755432 3788999999999999999988887776777888889888
Q ss_pred HHHHHHHHHHHhhcccce
Q 016875 106 SVATLIGLIALAIGKPFY 123 (381)
Q Consensus 106 ~i~m~~~l~~f~~g~~~y 123 (381)
++.+++..++++..+|+.
T Consensus 454 ~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 454 GLVTLLVGVVMALMVPWL 471 (475)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888877777776655544
No 142
>PRK10133 L-fucose transporter; Provisional
Probab=90.72 E-value=3.7 Score=41.28 Aligned_cols=95 Identities=12% Similarity=0.020 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHH
Q 016875 262 LLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIF 341 (381)
Q Consensus 262 ~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~ 341 (381)
.+...+..|+...+ .+|.+++ +=+.+|+++.+++.+...... ..-+.++++...++.
T Consensus 71 ~~g~~i~~~~~g~l----~dr~G~r-------~~l~~g~~~~~~~~~l~~~~~------------~a~~~~~ll~~r~l~ 127 (438)
T PRK10133 71 YFGYFIIPIPAGIL----MKKLSYK-------AGIITGLFLYALGAALFWPAA------------EIMNYTLFLVGLFII 127 (438)
T ss_pred HHHHHHHHHHHHHH----HHHhCcH-------HHHHHHHHHHHHHHHHHHHHH------------hcCCHHHHHHHHHHH
Confidence 34444555555443 4565432 234566666666654332111 012467778888999
Q ss_pred HHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 342 GIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 342 ~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
|++.....+....++.+.+|++.+...++++....++|
T Consensus 128 G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G 165 (438)
T PRK10133 128 AAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFG 165 (438)
T ss_pred HHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHH
Confidence 99999999999999988888887776666655554443
No 143
>PRK03893 putative sialic acid transporter; Provisional
Probab=90.63 E-value=3 Score=42.09 Aligned_cols=51 Identities=8% Similarity=0.098 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+.+++....++.|++.....+.....+.+..|++.|+..+|++....++|+
T Consensus 107 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 157 (496)
T PRK03893 107 GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGA 157 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 466777788999999999999999999999999999999999888776653
No 144
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=90.63 E-value=3.6 Score=39.42 Aligned_cols=96 Identities=23% Similarity=0.182 Sum_probs=62.1
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHH
Q 016875 255 PSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWL 334 (381)
Q Consensus 255 ~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wl 334 (381)
.++.+...+...+..|+...+. +|.+++ +-+.+|.++.+++.+..+... + +.+++
T Consensus 40 ~~~~~~~~~~~~~~~~~~g~l~----dr~g~r-------~~~~~~~~~~~i~~~~~~~~~-------------~-~~~~~ 94 (366)
T TIGR00886 40 GNLVAVPVLAGAVLRIILGFLV----DKFGPR-------YTTTLSLLLLAIPCLWAGLAV-------------Q-SYSVL 94 (366)
T ss_pred hHhhHHHHHHHHHHHHHHHHHH----HHhCch-------HHHHHHHHHHHHHHHHHHHHh-------------h-hHHHH
Confidence 3444555555556666666543 555432 235567777766665543321 1 46667
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHh
Q 016875 335 SFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHC 376 (381)
Q Consensus 335 v~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~ 376 (381)
+...++.|++.... +.....+.+..|++.|+..++++....
T Consensus 95 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~ 135 (366)
T TIGR00886 95 LLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWG 135 (366)
T ss_pred HHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHh
Confidence 77788899987654 556789999999999999999887443
No 145
>PRK11010 ampG muropeptide transporter; Validated
Probab=90.47 E-value=6.4 Score=40.20 Aligned_cols=95 Identities=17% Similarity=0.248 Sum_probs=63.6
Q ss_pred HHHHHHHHHhhhhcCCCCCCCCcch-hhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhh
Q 016875 271 IYEFLFVPFARKITGHPAGITQLQR-VGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTF 349 (381)
Q Consensus 271 ~~~~~~~p~~~k~~~~~~~~s~l~k-i~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~ 349 (381)
+...+|-|+.+|.+..+ ...-++ +.++.++.+++....+... . .-+.+|+...+++.++.-....
T Consensus 60 ~~~~l~gpl~Dr~~~~~--~Grrr~~ll~~~i~~~~~~~~~a~~~--------~----~~~l~~l~~~~~l~~~~~a~~~ 125 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPF--LGRRRGWLLATQLLLLVAIAAMGFLE--------P----GTQLRWLAALAVVIAFCSASQD 125 (491)
T ss_pred HHHHHHHHHHHcccccC--CCCchHHHHHHHHHHHHHHHHHHHcC--------C----cchHHHHHHHHHHHHHHHHHHH
Confidence 55666777777753210 011112 4455555555554443321 1 2357888888899999999999
Q ss_pred hhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 350 VGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 350 ~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+..-.+..+..|++.|+..+|+......+|
T Consensus 126 i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG 155 (491)
T PRK11010 126 IVFDAWKTDVLPAEERGAGAAISVLGYRLA 155 (491)
T ss_pred HHHHHHHHHhcChhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999888766554
No 146
>PRK10054 putative transporter; Provisional
Probab=90.43 E-value=3.1 Score=41.04 Aligned_cols=95 Identities=9% Similarity=0.137 Sum_probs=58.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHH
Q 016875 259 VLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQY 338 (381)
Q Consensus 259 ~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y 338 (381)
++..+..++..|+..++. +|.+++ +-+.+|.++.+++++..+... +.+..+..+
T Consensus 50 s~~~~~~~~~~~~~G~l~----Dr~g~k-------~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 103 (395)
T PRK10054 50 TIALTIGVVFSLGFGILA----DKFDKK-------RYMLLAITAFASGFIAIPLVN---------------NVTLVVLFF 103 (395)
T ss_pred HHHHHHHHHHHHHHHHHH----hhcCcc-------hhHHHHHHHHHHHHHHHHHHh---------------HHHHHHHHH
Confidence 333444445556655543 454421 224456666666655443221 233334455
Q ss_pred HHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 339 CIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 339 ~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
.+.+.+.....+.....+.+..|++.|+..+|+......+|
T Consensus 104 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg 144 (395)
T PRK10054 104 ALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIG 144 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Confidence 67777777778888888999999999999999887766554
No 147
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=90.35 E-value=23 Score=36.20 Aligned_cols=44 Identities=16% Similarity=0.177 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHh
Q 016875 331 LFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHC 376 (381)
Q Consensus 331 ~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~ 376 (381)
-+|... ++.|+.---..+..=+++.+..|++..+...|+|-++-
T Consensus 382 ~f~~~a--~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~g 425 (477)
T PF11700_consen 382 EFWVLA--VLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITG 425 (477)
T ss_pred HHHHHH--HHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence 345443 35566666667778889999999999999999998763
No 148
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.98 E-value=2.4 Score=45.32 Aligned_cols=91 Identities=24% Similarity=0.374 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee-------------
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI------------- 94 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~------------- 94 (381)
.++++|..+..+|.- -+.++|---.||+..+ ++...++.++|..--+|..+|.++.++.-+
T Consensus 238 llff~~q~l~GIG~T----pi~tlGisYiDDnvk~--~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it 311 (735)
T KOG3626|consen 238 LLFFLGQLLLGIGAT----PIFTLGISYIDDNVKK--KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGIT 311 (735)
T ss_pred HHHHHHHHHhhcCCC----CCccCCCccccccccc--cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCC
Confidence 356666666666543 4456666666665442 234668888888888888888777664311
Q ss_pred -----cc-cchhHHHHHHHHHHHHHHHHhhccccee
Q 016875 95 -----DQ-GWWLGFLISSVATLIGLIALAIGKPFYR 124 (381)
Q Consensus 95 -----~~-g~~~~F~i~~i~m~~~l~~f~~g~~~y~ 124 (381)
.+ .||+||++++..++++.+-++..=|.++
T Consensus 312 ~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 312 PTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 12 4999999999888887776666444443
No 149
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=89.69 E-value=20 Score=36.48 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeE
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV 92 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i 92 (381)
...++-..+..++.-.+.---.++.++.-+| |+| |.+-.+|-.++.|+|.++..++.+.+
T Consensus 113 ~ya~vtY~l~~l~YT~vniPy~al~~~iT~d--~~E---R~~l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 113 IYALVTYMLLGLGYTLVNIPYGALGPEITQD--PQE---RASLTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred HHHHHHHHHHHHHHHheeCchhhcchhhcCC--HHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444445555555555556666665544 543 77888999999999988776665444
No 150
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=89.68 E-value=22 Score=35.00 Aligned_cols=86 Identities=15% Similarity=0.146 Sum_probs=64.4
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecc-cchhHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-GWWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~-g~~~~F~i 104 (381)
+...++.|-.++.+|.+-...-+.+++=+-|++ +...--..|-.++++|+.++..+++.+.++. ||+.+.+.
T Consensus 98 ~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-------~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~ 170 (395)
T COG2807 98 GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-------RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGF 170 (395)
T ss_pred cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-------chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHH
Confidence 456777777777777777766667766665544 2456677889999999999999998888877 79998887
Q ss_pred HHHHHHHHHHHHhh
Q 016875 105 SSVATLIGLIALAI 118 (381)
Q Consensus 105 ~~i~m~~~l~~f~~ 118 (381)
=++.-++++++.+-
T Consensus 171 WAl~allAl~~WlP 184 (395)
T COG2807 171 WALLALLALLIWLP 184 (395)
T ss_pred HHHHHHHHHHHHhh
Confidence 66666666665544
No 151
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=89.34 E-value=1.9 Score=43.32 Aligned_cols=49 Identities=16% Similarity=0.046 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 331 LFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 331 ~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.+++..-++.|++.....|....++.+..|++.|+..+|++.....+|
T Consensus 120 ~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G 168 (479)
T PRK10077 120 VPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFG 168 (479)
T ss_pred HHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHH
Confidence 4556677799999999999999999999999999999999987665544
No 152
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=89.18 E-value=17 Score=36.29 Aligned_cols=79 Identities=16% Similarity=0.021 Sum_probs=58.2
Q ss_pred HHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeeccc---chhHHHHHHHHHHHH
Q 016875 36 LYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG---WWLGFLISSVATLIG 112 (381)
Q Consensus 36 lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g---~~~~F~i~~i~m~~~ 112 (381)
++.+|-|-|-. -.+....-|++++ +.....++= .-|+|..+..++.|.+....| |+.+-.+..+.++++
T Consensus 114 l~G~~GasFav-~m~~~s~~fP~~~------qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 114 LLGLAGASFAV-GMPNASFFFPKEK------QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIA 185 (417)
T ss_pred HHhcccceehc-ccccccccCChhh------hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 34444444433 3355666776543 456666666 789999999999999999988 999999999999998
Q ss_pred HHHHhhcccc
Q 016875 113 LIALAIGKPF 122 (381)
Q Consensus 113 l~~f~~g~~~ 122 (381)
.+.++.+.+.
T Consensus 186 ~v~~~~~~~d 195 (417)
T COG2223 186 AVLAWLGMND 195 (417)
T ss_pred HHHHHHHhCC
Confidence 8888877654
No 153
>PRK10504 putative transporter; Provisional
Probab=89.12 E-value=3.8 Score=41.11 Aligned_cols=50 Identities=10% Similarity=-0.035 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.++++...+++|++.....|.....+.+..|++.++..+|+......+|
T Consensus 97 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 146 (471)
T PRK10504 97 TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVG 146 (471)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 35666777899999999999999999999999999999988877655443
No 154
>PRK03699 putative transporter; Provisional
Probab=89.00 E-value=4.2 Score=39.85 Aligned_cols=49 Identities=14% Similarity=0.036 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHL 378 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~ 378 (381)
+.++++...++.|+++....+.....+.+..|++.|+..++......++
T Consensus 94 ~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 142 (394)
T PRK03699 94 SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSM 142 (394)
T ss_pred hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHH
Confidence 3566777789999999999888889999999999999988876655443
No 155
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=89.00 E-value=1.8 Score=42.93 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=59.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchh-HHHHHHHHH
Q 016875 295 RVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGM-RTLLLHLHF 373 (381)
Q Consensus 295 ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m-~s~~~g~~~ 373 (381)
-|.+|++++..+-++.++.+ |.+.++..-.++|+|..+.+..|+++..+.-|++- ||..||+-+
T Consensus 138 pm~~Gl~vmf~sTilFafg~---------------sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGial 202 (464)
T KOG3764|consen 138 PMVAGLFVMFLSTILFAFGN---------------SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIAL 202 (464)
T ss_pred HHHHHHHHHHHHHHHHHHcc---------------hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHH
Confidence 47889998888877766554 24467778899999999999999999999999988 499999998
Q ss_pred HHhhccC
Q 016875 374 CHCHLAT 380 (381)
Q Consensus 374 l~~a~G~ 380 (381)
-..++|-
T Consensus 203 gfislG~ 209 (464)
T KOG3764|consen 203 GFISLGV 209 (464)
T ss_pred HHHhccc
Confidence 8888874
No 156
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=88.66 E-value=5.8 Score=40.42 Aligned_cols=50 Identities=12% Similarity=-0.026 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.++++...++.|+++....+....+....+|++.|+..++++.....+|
T Consensus 114 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g 163 (502)
T TIGR00887 114 VMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFG 163 (502)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHH
Confidence 46678888899999999999999999999999999999999988776554
No 157
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=88.53 E-value=3.2 Score=41.01 Aligned_cols=45 Identities=16% Similarity=0.067 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhc
Q 016875 334 LSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHL 378 (381)
Q Consensus 334 lv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~ 378 (381)
+...-.+.+++-..+.+....++.+..|.+.||..+|+.....++
T Consensus 355 l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~al 399 (451)
T KOG2615|consen 355 LYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGAL 399 (451)
T ss_pred hhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence 444457788888999999999999999999999999998877654
No 158
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=88.47 E-value=7 Score=38.33 Aligned_cols=46 Identities=11% Similarity=-0.093 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHH
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCH 375 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~ 375 (381)
+.++++...++.|++..+..+.......+..|++.+...+++....
T Consensus 100 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 145 (406)
T PRK15402 100 SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANV 145 (406)
T ss_pred cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHH
Confidence 3556667788999999888888999999999998888777766543
No 159
>PRK09669 putative symporter YagG; Provisional
Probab=88.36 E-value=0.6 Score=46.80 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCch-hhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccc
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW 98 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~-~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~ 98 (381)
...+++...+..+|.|..-+...++.+|..|.++.+ .+++....|+.+.++.++|..+++.+.+++-+..||
T Consensus 319 ~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 319 VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 445677777888999999999999999988754432 122234567888999999999998888777665555
No 160
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=88.33 E-value=0.64 Score=44.48 Aligned_cols=69 Identities=19% Similarity=0.240 Sum_probs=51.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHH
Q 016875 296 VGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCH 375 (381)
Q Consensus 296 i~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~ 375 (381)
+.+|.++.+++.+..+.. .+.++++...++.|+++.+..+.....+.+..|++.|+..+|++...
T Consensus 63 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 127 (379)
T TIGR00881 63 LPIGLILCAIVNLFFGFS---------------TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCS 127 (379)
T ss_pred hHHHHHHHHHHHHHHHHh---------------hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhcc
Confidence 455666666655544322 14566777789999999999999999999999999999988887766
Q ss_pred hhcc
Q 016875 376 CHLA 379 (381)
Q Consensus 376 ~a~G 379 (381)
..+|
T Consensus 128 ~~~g 131 (379)
T TIGR00881 128 HNVG 131 (379)
T ss_pred chhH
Confidence 5554
No 161
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=88.10 E-value=1.8 Score=43.57 Aligned_cols=51 Identities=24% Similarity=0.195 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+.++++..-+++|++|....|.....+.+..|++.|+..+|++.....+|.
T Consensus 130 ~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 180 (465)
T TIGR00894 130 GIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGT 180 (465)
T ss_pred CchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 356788888999999999999999999999999999999999988766653
No 162
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=88.01 E-value=0.52 Score=48.35 Aligned_cols=79 Identities=20% Similarity=0.322 Sum_probs=62.0
Q ss_pred HHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe------ecccchhHHHHHHH
Q 016875 34 LYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF------IDQGWWLGFLISSV 107 (381)
Q Consensus 34 L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~------~~~g~~~~F~i~~i 107 (381)
-.++++=.++.=|+....++.-|++++ +..-+.+||.+.++|..+|.+++..+. ...||++.|.+.++
T Consensus 141 r~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~ 214 (495)
T KOG2533|consen 141 RFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGV 214 (495)
T ss_pred HHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHH
Confidence 456666677777999999999998754 677889999999999999999988863 35799999999886
Q ss_pred HHH-HHHHHHhh
Q 016875 108 ATL-IGLIALAI 118 (381)
Q Consensus 108 ~m~-~~l~~f~~ 118 (381)
.++ .++++|++
T Consensus 215 i~~~~gi~~f~~ 226 (495)
T KOG2533|consen 215 ITLVLGIVVFFF 226 (495)
T ss_pred HHHHHHheEEEE
Confidence 654 45555543
No 163
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=87.65 E-value=0.73 Score=45.66 Aligned_cols=90 Identities=18% Similarity=0.184 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCch-hhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccch-------
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWW------- 99 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~-~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~------- 99 (381)
..+++...+..+|.|..-+...++.+|..|.++-+ .++++..++..+.+..++|..+++.+.+++-+..||.
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~ 391 (437)
T TIGR00792 312 PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSP 391 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCH
Confidence 44455556677888888888899999987754321 1223567788899999999999999988887766663
Q ss_pred -------hH-HHHHHHHHHHHHHHHh
Q 016875 100 -------LG-FLISSVATLIGLIALA 117 (381)
Q Consensus 100 -------~~-F~i~~i~m~~~l~~f~ 117 (381)
+. ..+|++.++++++++.
T Consensus 392 ~~~~~~~~~~~~~p~i~~~~~~~~~~ 417 (437)
T TIGR00792 392 ITLNGIKILMFAVPALFLLLAAIIIG 417 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 3356666666666554
No 164
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=86.98 E-value=6.7 Score=38.24 Aligned_cols=50 Identities=12% Similarity=0.020 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.++++...++.|++..+..+.....+.+..|++.|+..+|++.....+|
T Consensus 90 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~ 139 (392)
T PRK10473 90 TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCII 139 (392)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 35667777889999999999999999999999999999999887655443
No 165
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=85.74 E-value=1.2 Score=44.00 Aligned_cols=50 Identities=10% Similarity=-0.019 Sum_probs=43.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHH
Q 016875 67 LASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 116 (381)
Q Consensus 67 ~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f 116 (381)
+...+.+++...++|+.++|.+.+++-|..||...|.+.++..+++.++.
T Consensus 348 ~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 348 KGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999988777666655443
No 166
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=85.59 E-value=4.5 Score=40.18 Aligned_cols=50 Identities=12% Similarity=-0.076 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.++++..-+++|+++.+..+.......+..|++.++..+|++.....+|
T Consensus 103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (413)
T PRK15403 103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVA 152 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 46777778899999998877777777777889988888888877765544
No 167
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=85.40 E-value=7.2 Score=38.31 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhhhcCCCCCCCCcch-hhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhh
Q 016875 271 IYEFLFVPFARKITGHPAGITQLQR-VGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTF 349 (381)
Q Consensus 271 ~~~~~~~p~~~k~~~~~~~~s~l~k-i~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~ 349 (381)
+...+|-|+.+|.+.. .....++ +.++.++.++++...++.+ . ..+++++...+++.++......
T Consensus 47 ~~~~l~g~~~Dr~~~~--~~g~rr~~l~~~~~~~~l~~~~l~~~~--------~----~~~~~~l~~~~~~~~~~~~~~~ 112 (402)
T PRK11902 47 IFKFLWAPLMDRYTPP--LLGRRRGWLLLTQVGLAASIAAMAFCP--------P----HAALWPLAGLAVLVAFLSASQD 112 (402)
T ss_pred HHHHHHHHHHHccccc--CCCcchhHHHHHHHHHHHHHHHHHhcC--------c----cchHHHHHHHHHHHHHHHHHHH
Confidence 4444455555665210 0011123 4555666666655443321 1 1246667777788889999999
Q ss_pred hhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 350 VGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 350 ~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
|..-+++.+..|++.|+...++.....++|
T Consensus 113 ~~~~al~~~~~~~~~r~~~~~~~~~g~~~g 142 (402)
T PRK11902 113 IVFDAYSTDVLHPEERGAGAAVKVLGYRLA 142 (402)
T ss_pred HHHHHHHHHhcChhhhhHHHHHHHHHHHHH
Confidence 999999999999999999888877665554
No 168
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=85.21 E-value=4.8 Score=40.93 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchH---HHHHHHHHHHHHHHH
Q 016875 270 PIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISL---FWLSFQYCIFGIADM 346 (381)
Q Consensus 270 p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~---~wlv~~y~l~~~~E~ 346 (381)
|+-..+.-++.+|.+++ +-+.+++++.+++.+..++.... ..+.+ .+++..-+++|+++-
T Consensus 71 ~ig~~~~G~l~Dr~Grr-------~~l~~~~~l~~i~~~~~a~~~~~----------~~~g~~a~~~l~~~R~l~G~g~g 133 (490)
T PRK10642 71 PLGGLFFGMLGDKYGRQ-------KILAITIVIMSISTFCIGLIPSY----------ATIGIWAPILLLLCKMAQGFSVG 133 (490)
T ss_pred HHHHHHHHHHHHhcccH-------HHHHHHHHHHHHHHHHHHhcccH----------HHHHHHHHHHHHHHHHHHHhHhH
Confidence 34444444556676542 34566777777776665544310 11222 347778899999999
Q ss_pred HhhhhhHHHHHhhcCchhHHHHHHHHHHHhhc
Q 016875 347 FTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHL 378 (381)
Q Consensus 347 ~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~ 378 (381)
...+.+..++.+..|++.|+.+++++.....+
T Consensus 134 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~ 165 (490)
T PRK10642 134 GEYTGASIFVAEYSPDRKRGFMGSWLDFGSIA 165 (490)
T ss_pred hhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999887755443
No 169
>TIGR00898 2A0119 cation transport protein.
Probab=85.10 E-value=2.6 Score=42.74 Aligned_cols=50 Identities=12% Similarity=0.004 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+.++++...++.|++.....+....++.+..|++.|+..++++.+..++|
T Consensus 179 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g 228 (505)
T TIGR00898 179 NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLG 228 (505)
T ss_pred cHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHH
Confidence 46777888899999999999999999999999999999999987766655
No 170
>TIGR00901 2A0125 AmpG-related permease.
Probab=84.97 E-value=8.5 Score=36.89 Aligned_cols=51 Identities=6% Similarity=-0.135 Sum_probs=42.6
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 329 ISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 329 ~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
.+.+++...+++.++.-.+..+....++.+.+|++.|+...|+......+|
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G 131 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAG 131 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHH
Confidence 356777777888888888999999999999999999999998877666555
No 171
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=84.96 E-value=48 Score=33.80 Aligned_cols=81 Identities=14% Similarity=0.007 Sum_probs=56.4
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
+.+.+.+.-.+.+++.++.-.+....++|.+.++. |...-++ +.....|+.+++.+.+|+-. +|++-+.+.
T Consensus 170 ~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~ 240 (521)
T KOG0255|consen 170 NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWII 240 (521)
T ss_pred cHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 34445555556667777777888888888887643 5555566 66677777788887777766 899999887
Q ss_pred HHHHHHHHHH
Q 016875 106 SVATLIGLIA 115 (381)
Q Consensus 106 ~i~m~~~l~~ 115 (381)
.+.-++.++.
T Consensus 241 ~~~~~~~~~~ 250 (521)
T KOG0255|consen 241 SIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHH
Confidence 7666555554
No 172
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=84.80 E-value=4.3 Score=43.07 Aligned_cols=114 Identities=11% Similarity=0.058 Sum_probs=75.1
Q ss_pred cccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHH--Hhhhc------------
Q 016875 256 SIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVK--RRNAF------------ 321 (381)
Q Consensus 256 ~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~--~~~~~------------ 321 (381)
++.+.+.+.-.+..++...+ ..|.+ ..+-+++|+++.+++.++.++.... ++...
T Consensus 72 ~i~s~~~i~~~~~~i~v~~~----~~r~~-------r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~ 140 (633)
T TIGR00805 72 LINGSYEIGNLLLIIFVSYF----GTKLH-------RPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSA 140 (633)
T ss_pred eeeehhhHHHHHHHHHHHHh----hcccC-------cceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccc
Confidence 34445555555666665543 34433 2356889999999998877665311 00000
Q ss_pred -----c-C--------------CCCc--cchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 322 -----N-Q--------------SPPK--QISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 322 -----~-~--------------~g~~--~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
. + .... ......++..-+++|+|+....+.+..++.+..|++.++..+|++.....+|
T Consensus 141 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG 220 (633)
T TIGR00805 141 NSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFG 220 (633)
T ss_pred ccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhh
Confidence 0 0 0000 1123445566799999999999999999999999999999999999887776
Q ss_pred C
Q 016875 380 T 380 (381)
Q Consensus 380 ~ 380 (381)
.
T Consensus 221 ~ 221 (633)
T TIGR00805 221 P 221 (633)
T ss_pred h
Confidence 3
No 173
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=84.79 E-value=0.43 Score=45.99 Aligned_cols=76 Identities=11% Similarity=0.040 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHH-HHHHHHHHHHhhhheeEeeccc-chhHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-FATTLAAMIGVTAIVYVFIDQG-WWLGFLIS 105 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY-~~iNiGa~~a~~~~~~i~~~~g-~~~~F~i~ 105 (381)
..++.++.+..++.|..-+...++..|.+++++ |.+.+...| ++..+|+.+++.+.+++.|+.| |+..+...
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~ 386 (394)
T TIGR00883 313 TLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYL 386 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHH
Confidence 344455566667777788888888898887543 445555534 4556899899999999999888 77666555
Q ss_pred HHHH
Q 016875 106 SVAT 109 (381)
Q Consensus 106 ~i~m 109 (381)
++..
T Consensus 387 ~~~~ 390 (394)
T TIGR00883 387 AALA 390 (394)
T ss_pred HHHH
Confidence 5443
No 174
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=84.71 E-value=8 Score=38.56 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=51.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHH
Q 016875 296 VGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCH 375 (381)
Q Consensus 296 i~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~ 375 (381)
+.+|.++.+++.+..+... . ...+.+.+....++.|+++....+...+.+.+..|++.|+..+|++...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~ 162 (438)
T TIGR00712 94 LPAGLILSAAVMLLMGFVP--------W---ATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCA 162 (438)
T ss_pred hHHHHHHHHHHHHHHhccc--------c---ccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHH
Confidence 4456666666655443221 0 1123444556678899999988888889999999999999999998877
Q ss_pred hhcc
Q 016875 376 CHLA 379 (381)
Q Consensus 376 ~a~G 379 (381)
.++|
T Consensus 163 ~~~g 166 (438)
T TIGR00712 163 HNIG 166 (438)
T ss_pred HHhH
Confidence 6655
No 175
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=83.68 E-value=7.7 Score=37.37 Aligned_cols=69 Identities=10% Similarity=0.102 Sum_probs=51.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHH
Q 016875 296 VGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCH 375 (381)
Q Consensus 296 i~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~ 375 (381)
+.+|.++.+++.+...... +.+.++...++.|++.....+....+..+..|++.|+..+|++...
T Consensus 59 ~~~~~~~~~i~~~~~~~~~---------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (377)
T PRK11102 59 ILGGTLVFALAAVACALAQ---------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLV 123 (377)
T ss_pred HHHHHHHHHHHHHHHHHHc---------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4556666666655443221 2455666788999999999999999999999999999999998876
Q ss_pred hhcc
Q 016875 376 CHLA 379 (381)
Q Consensus 376 ~a~G 379 (381)
..+|
T Consensus 124 ~~~g 127 (377)
T PRK11102 124 MTIA 127 (377)
T ss_pred HHHH
Confidence 6554
No 176
>PRK09952 shikimate transporter; Provisional
Probab=83.65 E-value=1.6 Score=43.68 Aligned_cols=81 Identities=9% Similarity=-0.054 Sum_probs=55.4
Q ss_pred HHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHH-HHHHHHHHhhhheeEeecc--cchhHHHHHHHHH
Q 016875 33 SLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA-TTLAAMIGVTAIVYVFIDQ--GWWLGFLISSVAT 109 (381)
Q Consensus 33 ~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~-iNiGa~~a~~~~~~i~~~~--g~~~~F~i~~i~m 109 (381)
.+.+..++.|..-+...++..|.++.+ .|..+..+-|.. ..+|+.++|.+++++.+.. +|...|...++..
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~------~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 422 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGAS------YRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC 422 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcc------hhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 334445666666677778888888753 255667775544 4589999999999987643 4888888777777
Q ss_pred HHHHHHHhhc
Q 016875 110 LIGLIALAIG 119 (381)
Q Consensus 110 ~~~l~~f~~g 119 (381)
+++.+..+..
T Consensus 423 ~i~~v~~~~~ 432 (438)
T PRK09952 423 LISAMTALLM 432 (438)
T ss_pred HHHHHHHHHc
Confidence 7776655443
No 177
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=83.57 E-value=4.7 Score=40.16 Aligned_cols=96 Identities=10% Similarity=0.057 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhh
Q 016875 270 PIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTF 349 (381)
Q Consensus 270 p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~ 349 (381)
|+-..+.-++.+|.++| +-+.+++++.+++.+..++... .... + .-+..+++..-+++|++|-...
T Consensus 77 ~ig~~~~G~l~Dr~Grr-------~~l~~~~~~~~~~~~~~~~~~~----~~~~-~--~~~~~~l~~~R~l~G~g~g~~~ 142 (432)
T PRK10406 77 PIGGWLFGRIADKHGRK-------KSMLISVCMMCFGSLVIACLPG----YETI-G--TWAPALLLLARLFQGLSVGGEY 142 (432)
T ss_pred HHHHHHHHHHHHhcCcH-------HHHHHHHHHHHHHHHHHhhcCC----chhH-H--HHHHHHHHHHHHHHHhhhhhhH
Confidence 44444555566776542 2345566666665554433220 0000 0 1245667778899999999999
Q ss_pred hhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 350 VGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 350 ~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
|....++.+.+|++.|+..++++......|
T Consensus 143 ~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G 172 (432)
T PRK10406 143 GTSATYMSEVAVEGRKGFYASFQYVTLIGG 172 (432)
T ss_pred hhHHHHHHHhCCCCcccHHHHHHHHHHHHH
Confidence 999999999999999999988876654433
No 178
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=83.44 E-value=1.4 Score=43.21 Aligned_cols=48 Identities=17% Similarity=0.232 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHH
Q 016875 67 LASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 114 (381)
Q Consensus 67 ~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~ 114 (381)
+...+..+....++|..+++.+.+++.|..||...|.++++..+++.+
T Consensus 338 ~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 338 AGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 577888888889999999999999999999999999988776666544
No 179
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=83.03 E-value=1.8 Score=44.24 Aligned_cols=86 Identities=24% Similarity=0.269 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeeccc-chhHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG-WWLGFLIS 105 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g-~~~~F~i~ 105 (381)
.+-+|+-=.++.+..|...+..-++.++.-++++ ...+|..|-+.--..++++|++.+.+.+..| .+.+|..-
T Consensus 380 ~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l 453 (477)
T PF11700_consen 380 PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFL 453 (477)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 3445555567889999999999999999887643 4789999999999999999999999988876 88999988
Q ss_pred HHHHHHHHHHHhh
Q 016875 106 SVATLIGLIALAI 118 (381)
Q Consensus 106 ~i~m~~~l~~f~~ 118 (381)
.+.++++++++..
T Consensus 454 ~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 454 LVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHHHHHhh
Confidence 8888888887754
No 180
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=82.94 E-value=5.6 Score=44.84 Aligned_cols=51 Identities=6% Similarity=-0.149 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+.++++...++.|+++.+..|....++.+..|++.++.++|+.....++|.
T Consensus 102 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~ 152 (1146)
T PRK08633 102 WFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAI 152 (1146)
T ss_pred cHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHH
Confidence 367788888999999999999999999999999999999999888776653
No 181
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=81.25 E-value=1.3 Score=43.54 Aligned_cols=46 Identities=17% Similarity=0.251 Sum_probs=37.2
Q ss_pred hHHHH-HHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHH
Q 016875 69 SYFNF-YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 114 (381)
Q Consensus 69 ~~f~~-fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~ 114 (381)
..+.. +....++|+.+++.+.+++-|..||+..|.+.++..+++..
T Consensus 343 t~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 343 TIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred EeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 34444 45789999999999999999999999999987777665554
No 182
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=81.23 E-value=2.1 Score=41.93 Aligned_cols=81 Identities=11% Similarity=0.020 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHH-HHHHHHHHHHhhhheeEeecccchhHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-FATTLAAMIGVTAIVYVFIDQGWWLGFLISS 106 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY-~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~ 106 (381)
+.++..-.+-+++.|.+-+....++.|+ ++++ +..+...|. ....+|..+++.+.+++.|++|+ ..|.+.+
T Consensus 294 ~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~ 365 (382)
T TIGR00902 294 PLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMA 365 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHH
Confidence 4455555667777777777777777764 3222 345555554 35679999999999999999997 6676666
Q ss_pred HHHHHHHHHH
Q 016875 107 VATLIGLIAL 116 (381)
Q Consensus 107 i~m~~~l~~f 116 (381)
+..++++++.
T Consensus 366 ~~~~~~~~~~ 375 (382)
T TIGR00902 366 IIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHH
Confidence 6555665443
No 183
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=81.05 E-value=41 Score=34.57 Aligned_cols=50 Identities=12% Similarity=0.122 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 331 LFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 331 ~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
.+-++..-+++|+.|-...|.-......-=.++-++..||+|+...++||
T Consensus 134 ~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~ 183 (495)
T KOG2533|consen 134 FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGN 183 (495)
T ss_pred hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhh
Confidence 45566667999999999999999999999999999999999998888876
No 184
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=80.49 E-value=45 Score=33.15 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHH-hhcc
Q 016875 334 LSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCH-CHLA 379 (381)
Q Consensus 334 lv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~-~a~G 379 (381)
++..-+++|+.-.+..+++..++.+.+|++.|+.++|++... .++|
T Consensus 304 ~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg 350 (400)
T PF03825_consen 304 QLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLG 350 (400)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHH
Confidence 444446899999999999999999999999999999998764 3554
No 185
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=80.11 E-value=47 Score=33.85 Aligned_cols=102 Identities=11% Similarity=0.026 Sum_probs=62.7
Q ss_pred cCCcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHH
Q 016875 253 PTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLF 332 (381)
Q Consensus 253 p~~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~ 332 (381)
.++++..+..+..+... +.....-++.+|.+.| +-+.+++++.++..+..+... ++ ..-|.+
T Consensus 68 s~~q~g~l~ai~~l~~a-l~rip~G~l~Dr~G~R-------~v~~~~~ll~~i~~~~~~~a~-------~~---~~~s~~ 129 (462)
T PRK15034 68 TTDQLFLLTALPSVSGA-LLRVPYSFMVPIFGGR-------RWTVFSTAILIIPCVWLGIAV-------QN---PNTPFG 129 (462)
T ss_pred CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHH-------cc---cCCCHH
Confidence 34444333333333333 2233334556676532 234556666555555444321 11 123577
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHH
Q 016875 333 WLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHF 373 (381)
Q Consensus 333 wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~ 373 (381)
.++...++.|++ ....+.++..+.+..|++.||.++|++.
T Consensus 130 ~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~ 169 (462)
T PRK15034 130 IFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGING 169 (462)
T ss_pred HHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHH
Confidence 788889999998 5578889999999999999999999984
No 186
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=79.97 E-value=14 Score=36.26 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
+.++++..-++.|++|.. .+.....+.+..|++.|+.+++++.....+|.
T Consensus 78 ~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~ 127 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGI 127 (368)
T ss_pred cHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 678888999999999986 45666667889999999999999998877663
No 187
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=79.61 E-value=8.4 Score=37.90 Aligned_cols=96 Identities=11% Similarity=0.041 Sum_probs=62.1
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHH
Q 016875 255 PSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWL 334 (381)
Q Consensus 255 ~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wl 334 (381)
.++.+...+...++.|+...+ .+|.++| +=+.++.++.+++.+..+... +.
T Consensus 41 ~~~~~~~~l~~~l~~~~~G~l----aDr~grr-------~vl~~~~~~~~~~~~~~~~~~---------------~~--- 91 (393)
T PRK11195 41 PLLQMFFVLAYIVLAPFVGAF----ADSFPKG-------RVMFIANGIKLLGCLLMLFGI---------------HP--- 91 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHh----hhccCCc-------hhhHHHHHHHHHHHHHHHHHH---------------HH---
Confidence 344455555666777777754 3565542 123445444444433222111 11
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 335 SFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 335 v~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
+..++++|+++.+..|.....+.+..|++.++..+|+......+|
T Consensus 92 ~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~ 136 (393)
T PRK11195 92 LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAA 136 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 344578999999999999999999999999999999887665544
No 188
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=79.59 E-value=8.2 Score=39.46 Aligned_cols=49 Identities=8% Similarity=0.052 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhH--HHHHHHHHHHhhccC
Q 016875 332 FWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMR--TLLLHLHFCHCHLAT 380 (381)
Q Consensus 332 ~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~--s~~~g~~~l~~a~G~ 380 (381)
++.+..+.++.++--...+..-+++.+.+|++.| +...+......++|+
T Consensus 115 ~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 115 IVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 4445455555555555666778999999999876 456666555555554
No 189
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=79.36 E-value=33 Score=35.26 Aligned_cols=50 Identities=6% Similarity=0.126 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~ 380 (381)
|++.+...-+++|++|.... ....++++-.|++.|+.++|++.....+|.
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~ 163 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGV 163 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 57788888899999999999 999999999999999999999998887763
No 190
>PF01891 CbiM: Cobalt uptake substrate-specific transmembrane region; InterPro: IPR002751 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the integral membrane protein CbiM, which is involved in cobalamin synthesis, although its exact function in unknown.; GO: 0009236 cobalamin biosynthetic process, 0016021 integral to membrane
Probab=79.16 E-value=28 Score=31.12 Aligned_cols=95 Identities=12% Similarity=0.078 Sum_probs=56.5
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCC--CccchHHHHHHHH
Q 016875 261 PLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSP--PKQISLFWLSFQY 338 (381)
Q Consensus 261 ~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g--~~~~s~~wlv~~y 338 (381)
|.+.+.+..++..+..+..++|+ .+..++..+++...++...++..-..........+ ..........+.+
T Consensus 108 N~l~m~~~~~~~~~~~~~~l~~~-------~~~~~~~~~F~ag~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 180 (205)
T PF01891_consen 108 NALNMGVPPVLVSYLLFRLLRRK-------FPRNIFVAGFLAGFLSVLLAALAVSLVLGLSGTAGDYPWMALVQAYLPSH 180 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHH
Confidence 44444455555566566555543 23345666666556665554443322222221111 0233445567889
Q ss_pred HHHHHHHHHhhhhhHHHHHhhcCc
Q 016875 339 CIFGIADMFTFVGLLEFFYKEAPA 362 (381)
Q Consensus 339 ~l~~~~E~~~~~~glef~~~~aP~ 362 (381)
.++++.|.+++-....+..+.-|+
T Consensus 181 ~~l~~~Eg~ltg~~v~~l~~~rP~ 204 (205)
T PF01891_consen 181 LLLAFPEGFLTGMVVTFLVVYRPE 204 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999998886
No 191
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=78.75 E-value=3.2 Score=42.11 Aligned_cols=53 Identities=9% Similarity=-0.032 Sum_probs=38.8
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHHhhcc
Q 016875 67 LASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK 120 (381)
Q Consensus 67 ~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f~~g~ 120 (381)
+.....+...+.|+|+.+++.+.. .++..+|..+|.+.++.++++.++.++.+
T Consensus 381 ~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 381 LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 456666666777788887776653 33456799999999988888887776654
No 192
>PRK09848 glucuronide transporter; Provisional
Probab=77.33 E-value=2.7 Score=42.07 Aligned_cols=90 Identities=14% Similarity=0.200 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchh-hhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccc-------
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKG-AKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW------- 98 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~-~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~------- 98 (381)
.+.+++++.+..+|.|...+...++..|.-|+++-+. .++...+++.+-+...+|..+++.+.+.+-+..||
T Consensus 319 ~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~~~~~~~ 398 (448)
T PRK09848 319 LPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQT 398 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCC
Confidence 4556677788889999999999999888776544221 12335566788888889999887776655433333
Q ss_pred -------hhHH-HHHHHHHHHHHHHH
Q 016875 99 -------WLGF-LISSVATLIGLIAL 116 (381)
Q Consensus 99 -------~~~F-~i~~i~m~~~l~~f 116 (381)
+..+ .+|+++++++++++
T Consensus 399 ~~~~~~i~~~~~~~p~~~~~~~~~~~ 424 (448)
T PRK09848 399 PEVIMGIRTSIALVPCGFMLLAFVII 424 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333 45667777776655
No 193
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=76.83 E-value=2.3 Score=44.04 Aligned_cols=54 Identities=15% Similarity=0.090 Sum_probs=47.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHHhhc
Q 016875 66 ALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 119 (381)
Q Consensus 66 ~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f~~g 119 (381)
.+.+.++.|.+..+.|..+|..+.+++.+.+|-..++.+++++++++.++....
T Consensus 340 ~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 340 VRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999999999998888777766543
No 194
>PRK11043 putative transporter; Provisional
Probab=76.28 E-value=35 Score=33.27 Aligned_cols=45 Identities=11% Similarity=-0.071 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHH
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFC 374 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l 374 (381)
+.++++...++.|++.....+.....+.+..|++.++...+....
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMP 137 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 466677777888988887788888888899999877766665543
No 195
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=75.92 E-value=1.6 Score=41.64 Aligned_cols=72 Identities=14% Similarity=-0.056 Sum_probs=55.2
Q ss_pred HHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHH
Q 016875 32 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLI 111 (381)
Q Consensus 32 ~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~ 111 (381)
.++.++.+|.+.+-|++.+...+.++++.. ..+.. .....+|+.+.|.+.+++.|..|.+.+|.++.++.+.
T Consensus 235 ~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-----~asai---~~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~~~ 306 (310)
T TIGR01272 235 WFVLALGLFNSIMFPTIFSLALNALGRHTS-----QGSGI---LCLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCYLY 306 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----hhHHH---HHHHHhcchHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 466678899999999999999888876432 23333 2456689999999999999999999999877665443
No 196
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=75.04 E-value=7.8 Score=38.50 Aligned_cols=58 Identities=14% Similarity=0.040 Sum_probs=44.8
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHHhhccccee
Q 016875 67 LASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYR 124 (381)
Q Consensus 67 ~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f~~g~~~y~ 124 (381)
.|..-+++--..|+|-..|..+.+.+-|++||......+++.++++++..+..+++.+
T Consensus 333 ~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 333 ADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5666666666677766666666677778899999999999999999988877766554
No 197
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=74.68 E-value=6.2 Score=39.20 Aligned_cols=63 Identities=13% Similarity=0.047 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI 94 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~ 94 (381)
...+|..+|..++.|.|..+....+++++.-+++...+ |- |.---...+|++++|.+.+++-.
T Consensus 103 ~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~---rl---nl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAF---RL---NLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHH---HH---HHHHHhhhhHHHHHHHHHHHHHH
Confidence 45677888999999999999999999999998754321 21 22222245788888887776644
No 198
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=74.63 E-value=0.88 Score=47.24 Aligned_cols=91 Identities=25% Similarity=0.372 Sum_probs=1.7
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee------------
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI------------ 94 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~------------ 94 (381)
..+|.+|-.+..+|..- +.+++-.-.||+-++ ++-.-++.++|....+|..+|.++.+..-+
T Consensus 141 ~~~f~~gq~l~GiG~~p----l~tLG~tYiDDnv~~--~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~ 214 (539)
T PF03137_consen 141 FYVFILGQLLIGIGATP----LYTLGITYIDDNVSK--KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDG 214 (539)
T ss_dssp -----------SSS------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccccC----Cccceeeeecccccc--ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccC
Confidence 45555565666555544 456666655665442 123457777888888888888777664421
Q ss_pred ---------ccc-chhHHHHHHHHHHHHHHHHhhcccce
Q 016875 95 ---------DQG-WWLGFLISSVATLIGLIALAIGKPFY 123 (381)
Q Consensus 95 ---------~~g-~~~~F~i~~i~m~~~l~~f~~g~~~y 123 (381)
.+| ||+||.++++..++..+-++..-|++
T Consensus 215 ~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 215 VGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp ---------------------------------------
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 134 99999998888777666665544434
No 199
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=74.18 E-value=7.8 Score=37.79 Aligned_cols=80 Identities=13% Similarity=0.008 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 107 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i 107 (381)
..+..+..+..+|.|..-|...+...|.+++ .+......+....|+|+.+++.+.+++.++.++..+..++.+
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (394)
T PRK11652 300 WTLLVPAALFFFGAGMLFPLATSGAMEPFPY-------LAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSLGLLMTLM 372 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------cchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHH
Confidence 4455566777788888888888877776642 134556777778899999999999998887767766655554
Q ss_pred HHHHHHH
Q 016875 108 ATLIGLI 114 (381)
Q Consensus 108 ~m~~~l~ 114 (381)
..+....
T Consensus 373 ~~~~~~~ 379 (394)
T PRK11652 373 GLLILLC 379 (394)
T ss_pred HHHHHHH
Confidence 4443333
No 200
>PTZ00207 hypothetical protein; Provisional
Probab=72.42 E-value=84 Score=33.14 Aligned_cols=76 Identities=11% Similarity=0.058 Sum_probs=57.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHH
Q 016875 295 RVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFC 374 (381)
Q Consensus 295 ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l 374 (381)
=+.+|.++.+++.+..++.. + +...-+++.+....++.|+|+.+..+.......+..| +.||.++|++..
T Consensus 93 vllig~ll~~iG~ll~ala~-------~--~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~ 162 (591)
T PTZ00207 93 IFVLSMTVFCLGTLLFALTF-------Q--EVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKT 162 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHh-------c--ccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHH
Confidence 35678888888877666532 0 0012356667778899999999999999988888887 578999999999
Q ss_pred HhhccC
Q 016875 375 HCHLAT 380 (381)
Q Consensus 375 ~~a~G~ 380 (381)
..++|+
T Consensus 163 ~~gLGs 168 (591)
T PTZ00207 163 FTGLGS 168 (591)
T ss_pred HHHHHH
Confidence 988875
No 201
>PF13347 MFS_2: MFS/sugar transport protein
Probab=71.59 E-value=7.6 Score=38.61 Aligned_cols=73 Identities=15% Similarity=0.072 Sum_probs=55.7
Q ss_pred chhHHHHHHHHHHHhcccccccccccccccCCCCCCchh-hhhhhhHHHHHHHHHHHHHHHHhhhheeEeeccc
Q 016875 25 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKG-AKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG 97 (381)
Q Consensus 25 ~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~-~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g 97 (381)
.+.+.+++...+..+|.|..-+...++.+|..|+++-+. +++....++.+-+...+|..++..+.+.+-+..|
T Consensus 313 ~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 313 GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 456788888889999999999999999999998755331 2233557777888899999999887776644333
No 202
>PRK15075 citrate-proton symporter; Provisional
Probab=71.57 E-value=4.6 Score=40.23 Aligned_cols=59 Identities=10% Similarity=-0.003 Sum_probs=38.9
Q ss_pred HHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHH-HHHHHhhhheeEeecccch
Q 016875 35 YLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL-AAMIGVTAIVYVFIDQGWW 99 (381)
Q Consensus 35 ~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNi-Ga~~a~~~~~~i~~~~g~~ 99 (381)
.+..++.|...+...+...|.++++ +|..++.+.|-..+. ++.++|.+.+++.|+.|+.
T Consensus 339 ~~~~~~~g~~~~~~~~~~~e~~p~~------~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 339 LWLSFLYGSYNGAMVVALTEVMPAE------VRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCC------ccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 3344556666665556677777543 256777776655554 5777899999998888853
No 203
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=71.39 E-value=3.3 Score=42.75 Aligned_cols=80 Identities=15% Similarity=0.266 Sum_probs=62.3
Q ss_pred HHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeeccc-chhHHHHHHHHHHHHH
Q 016875 35 YLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGL 113 (381)
Q Consensus 35 ~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g-~~~~F~i~~i~m~~~l 113 (381)
.++.+..|.+-.+......|..+.+ +..+.|.+..+...+++++++-+++++.|..| |...|..+++.++++.
T Consensus 396 ~~fG~~~g~~~~l~~~i~~~~~g~~------~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~ 469 (509)
T KOG2504|consen 396 ILFGFCVGSFSSLTPVILVDLVGLE------KLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSA 469 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChh------hcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHH
Confidence 3444555555555555566666543 37889999999999999999999999999887 9999999999999988
Q ss_pred HHHhhcc
Q 016875 114 IALAIGK 120 (381)
Q Consensus 114 ~~f~~g~ 120 (381)
..++.-+
T Consensus 470 ~~~~~~~ 476 (509)
T KOG2504|consen 470 VLLLILR 476 (509)
T ss_pred HHHHHhH
Confidence 7666544
No 204
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=70.12 E-value=1.4e+02 Score=30.76 Aligned_cols=86 Identities=14% Similarity=0.225 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhh-he-eEeecccchhHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA-IV-YVFIDQGWWLGFLI 104 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~-~~-~i~~~~g~~~~F~i 104 (381)
.-++.+|=.+.++..|.......-+..| -.|++ .|...=...=+++++|.+++..+ .+ .+++.-.|++.++.
T Consensus 116 ~e~li~GR~i~Gl~~gl~~~~~pmyl~E----~sP~~--~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~ 189 (485)
T KOG0569|consen 116 FEMLILGRLIVGLACGLSTGLVPMYLTE----ISPKN--LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAF 189 (485)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhh----cChhh--hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHH
Confidence 4567777778888888887777777764 33432 23333334457888888888443 33 44566789999999
Q ss_pred HHHHHHHHHHHHhh
Q 016875 105 SSVATLIGLIALAI 118 (381)
Q Consensus 105 ~~i~m~~~l~~f~~ 118 (381)
+.+..++.++...+
T Consensus 190 ~~i~~~~~l~~l~~ 203 (485)
T KOG0569|consen 190 PLIPALLQLALLPF 203 (485)
T ss_pred HHHHHHHHHHHHhc
Confidence 98877777665544
No 205
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=69.28 E-value=38 Score=35.18 Aligned_cols=67 Identities=15% Similarity=0.229 Sum_probs=53.5
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHH
Q 016875 293 LQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLH 372 (381)
Q Consensus 293 l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~ 372 (381)
.+=|.+|+.+.++=++....++ +.|..+|.-++.|+.-..+..+-.+++...+|++++..++|+.
T Consensus 436 v~v~~lgLa~~~~Rf~~~S~L~---------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~ 500 (618)
T KOG3762|consen 436 VNVMYLGLACNVGRFLYYSYLQ---------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLL 500 (618)
T ss_pred cceeeehhhHHHHHHHHHHHhc---------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHH
Confidence 3456778877777666554332 4666778889999999999999999999999999999999876
Q ss_pred HH
Q 016875 373 FC 374 (381)
Q Consensus 373 ~l 374 (381)
-.
T Consensus 501 ~g 502 (618)
T KOG3762|consen 501 QG 502 (618)
T ss_pred HH
Confidence 43
No 206
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=69.11 E-value=12 Score=35.75 Aligned_cols=81 Identities=12% Similarity=0.058 Sum_probs=56.4
Q ss_pred HHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecc---cchhHHHHHHH
Q 016875 31 YGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ---GWWLGFLISSV 107 (381)
Q Consensus 31 ~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~---g~~~~F~i~~i 107 (381)
|+++.++.+.....-...-+.++-..+|+ +...+|..-|-.-|+|-.+.+++++.+.|+- .|--+|.+...
T Consensus 356 y~~m~~lGLsysllAcslWP~va~~vpE~------qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 356 YTSMTFLGLSYSLLACSLWPCVASLVPEE------QLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred HHHHHHHhhhHHHHHHHHhhhhhhhCCHH------HhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 45555555555444333555555555443 4788999999999999999999999999864 46777877777
Q ss_pred HHHHHHHHHh
Q 016875 108 ATLIGLIALA 117 (381)
Q Consensus 108 ~m~~~l~~f~ 117 (381)
.|++..+..+
T Consensus 430 ~~aL~svgil 439 (459)
T KOG4686|consen 430 LMALTSVGIL 439 (459)
T ss_pred HHHHHHHHHH
Confidence 7766554443
No 207
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=68.84 E-value=6 Score=38.60 Aligned_cols=78 Identities=10% Similarity=-0.029 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHH-HHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-FATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY-~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
.+.++++..+..++.|..-+.......++ + ++ ++.+....+. ...++|..+++.+.+++.|.+|+. .|.+.
T Consensus 293 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~---~~---~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~ 364 (382)
T PRK11128 293 LPWLIVIQILHCGTFTVCHLAAMRYIAAR-P---GS---EVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVM 364 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C---Hh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHH
Confidence 34555666666777777666655555543 2 11 1345566654 456678889999999999999875 45444
Q ss_pred HHHHHHH
Q 016875 106 SVATLIG 112 (381)
Q Consensus 106 ~i~m~~~ 112 (381)
++.-+++
T Consensus 365 ~~~~~~~ 371 (382)
T PRK11128 365 ALVALPA 371 (382)
T ss_pred HHHHHHH
Confidence 4333333
No 208
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=68.50 E-value=29 Score=33.17 Aligned_cols=96 Identities=21% Similarity=0.236 Sum_probs=57.6
Q ss_pred cccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHH
Q 016875 256 SIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLS 335 (381)
Q Consensus 256 ~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv 335 (381)
+..+++.+...+..|+..++. +|.+++ +-+.+|.++.+++.+.. . . -+.++++
T Consensus 39 ~~~s~~~~~~~~~~~~~g~l~----dr~g~r-------~~~~~~~~~~~~~~~~~--~-------~-------~~~~~l~ 91 (355)
T TIGR00896 39 LLTALPVLCFAVLAPLAPWLA----RRFGEE-------RSVAAGLLLIAAGILIR--S-------A-------PGTALLF 91 (355)
T ss_pred HHHHHHHHHHHHHHHhHHHHH----HHhCch-------HHHHHHHHHHHHHHHHH--H-------h-------ccHHHHH
Confidence 344555556666666666643 555432 23455555544443321 0 1 1244555
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 336 FQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 336 ~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
..-++.|++..+..+.....+.+..|+ .|+..+|++.....+|
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 134 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFPQ-RVGLMTGLYSMALMGG 134 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCcc-hhhHHHHHHHHHHHHH
Confidence 667888999888777777777777765 6888999887665443
No 209
>PRK10429 melibiose:sodium symporter; Provisional
Probab=67.99 E-value=6.2 Score=39.97 Aligned_cols=71 Identities=13% Similarity=0.007 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCch-hhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccc
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW 98 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~-~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~ 98 (381)
..+.+...+..+|.|..-+...++.+|.-|.++-+ .+++...+|+.+-+...+|..+++.+.+++-+..||
T Consensus 325 ~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 325 LLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45555666677888888888889999988765322 122234478888888889998888887776554444
No 210
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=67.84 E-value=6.6 Score=44.45 Aligned_cols=77 Identities=10% Similarity=-0.111 Sum_probs=55.8
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee-cccchhHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI-DQGWWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~-~~g~~~~F~i 104 (381)
+.+.+.+++.++.+|.|.+-+...+++.+..+++. +.+.+..+.+..++|..+++.+.+++.+ ..++...|.+
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~ 406 (1140)
T PRK06814 333 HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILF 406 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 34556677788888888888888888887766543 5677777778888888888888877763 4566666665
Q ss_pred HHHH
Q 016875 105 SSVA 108 (381)
Q Consensus 105 ~~i~ 108 (381)
.++.
T Consensus 407 ~~~~ 410 (1140)
T PRK06814 407 IALA 410 (1140)
T ss_pred HHHH
Confidence 4443
No 211
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=67.63 E-value=1e+02 Score=30.75 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=53.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHH---HHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHH
Q 016875 296 VGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFW---LSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLH 372 (381)
Q Consensus 296 i~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~w---lv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~ 372 (381)
|-.|.++...+...+...-...-...+++ ..-+..| ....|++.|+|--.....++++..+.+||+-|+...++-
T Consensus 53 I~~G~~~~~~g~~~ap~a~~~l~~~~~~~--~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~iv 130 (403)
T PF03209_consen 53 IWGGTLLQAGGLAIAPFALLLLAESGQQS--SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIV 130 (403)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccccccc--ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHH
Confidence 44566666666555544432211111111 1223344 347889999999999999999999999999999999987
Q ss_pred HHHh
Q 016875 373 FCHC 376 (381)
Q Consensus 373 ~l~~ 376 (381)
|.+.
T Consensus 131 w~Ml 134 (403)
T PF03209_consen 131 WVML 134 (403)
T ss_pred HHHH
Confidence 7664
No 212
>PRK07331 cobalt transport protein CbiM; Provisional
Probab=66.15 E-value=70 Score=30.95 Aligned_cols=99 Identities=13% Similarity=0.164 Sum_probs=53.8
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhh-----ccCCCC-----ccc-
Q 016875 261 PLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNA-----FNQSPP-----KQI- 329 (381)
Q Consensus 261 ~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~-----~~~~g~-----~~~- 329 (381)
|.+.+-+..++..+++|...+|+. ++....+..+++-..++...+++.-...... .+++|. .+.
T Consensus 109 N~l~ma~~~~~v~y~iyr~~~~~~-----~~~~~~~~~~f~gg~l~i~~~al~~al~l~~~~~~~~~~~g~~~~~~~~~~ 183 (322)
T PRK07331 109 NCFNMAFIMPFVGYYIYKFIKKWT-----KSKKGEYIGAFIGGYIGINVAALFAAIEFGLQPLLFKDASGLPLYSPYPLS 183 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCccccccchHH
Confidence 344333445566666776665543 2333344445455555554444332211111 111221 112
Q ss_pred -hHHHHHHHHHHH-HHHHHHhhhhhHHHHHhhcCchh
Q 016875 330 -SLFWLSFQYCIF-GIADMFTFVGLLEFFYKEAPAGM 364 (381)
Q Consensus 330 -s~~wlv~~y~l~-~~~E~~~~~~glef~~~~aP~~m 364 (381)
++.-+.+..+.+ ++.|-.+...-+.|..|..|+-+
T Consensus 184 ~~~~~m~~~hl~i~gi~Eg~iT~~v~~~l~~~~p~ll 220 (322)
T PRK07331 184 VTIPAMLLPHLLVAGILEGIFTALVFSFIKRVSPGIL 220 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHh
Confidence 233355566665 99999999999999999999875
No 213
>PF14007 YtpI: YtpI-like protein
Probab=64.64 E-value=7.5 Score=30.03 Aligned_cols=69 Identities=20% Similarity=0.308 Sum_probs=43.4
Q ss_pred cCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHHhhcccceeecCC
Q 016875 54 GQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQP 128 (381)
Q Consensus 54 dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f~~g~~~y~~~~p 128 (381)
++++..||.| +...==-+.+.+|.++.....--.-- .+=.+.+.++++.+++|+...+.|.|.|+|..|
T Consensus 18 k~~Rs~~p~~-----k~~~~aka~ialG~fl~~fgiNQ~~~-~~st~~~iV~~ifl~lG~~n~~~G~r~y~hy~p 86 (89)
T PF14007_consen 18 KYFRSKDPME-----KKWYSAKANIALGIFLILFGINQMFL-FGSTVRLIVGAIFLVLGLFNLFAGIRAYRHYRP 86 (89)
T ss_pred HHhhcCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 4555566643 22111234556677766543311000 344688889999999999999999999887655
No 214
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=63.28 E-value=22 Score=36.40 Aligned_cols=82 Identities=15% Similarity=0.147 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeec-ccchhHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~-~g~~~~F~i 104 (381)
+...+++|-.+..+|.|+.--.+..+++|-=++ +.|...-+.+...+++|.+++..+....++. ++|+..+++
T Consensus 141 ~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~------~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~ 214 (513)
T KOG0254|consen 141 SWYQLIVGRILTGLGVGGASVLAPVYISEIAPA------HIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGL 214 (513)
T ss_pred hHHHHHHHHHHhccchhhhhhcchhhHhhcCCh------hhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHH
Confidence 567888888999999999875555544442211 2467777788889999999995554444433 589988876
Q ss_pred HHHHHHHHH
Q 016875 105 SSVATLIGL 113 (381)
Q Consensus 105 ~~i~m~~~l 113 (381)
..+.-++-.
T Consensus 215 ~~i~~~~~~ 223 (513)
T KOG0254|consen 215 ALIPAVILA 223 (513)
T ss_pred HHHHHHHHH
Confidence 554443333
No 215
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=61.83 E-value=6.2 Score=40.43 Aligned_cols=91 Identities=18% Similarity=0.085 Sum_probs=60.0
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe------e----cc
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF------I----DQ 96 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~------~----~~ 96 (381)
.+.+..+..+..+|.++.-|...++..++-++ +.|......++.+.-+|++++..+..+.. + ..
T Consensus 382 ~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~------~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~ 455 (500)
T PRK09584 382 VNWLIASYGLQSIGELMISGLGLAMVAQLVPQ------RLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLE 455 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhh
Confidence 34566677788899999999999998876443 24778888888888888888766653221 1 22
Q ss_pred cchhHHHHHHHHHHHHHHHHhhcccce
Q 016875 97 GWWLGFLISSVATLIGLIALAIGKPFY 123 (381)
Q Consensus 97 g~~~~F~i~~i~m~~~l~~f~~g~~~y 123 (381)
++...|..-++..++..++++.-.++.
T Consensus 456 ~~~~~f~~~~~~~~~~a~~~~~~~~~~ 482 (500)
T PRK09584 456 VYGRVFLQIGIATAVIAVLMLLTAPKL 482 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477888766655444444444433333
No 216
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=59.37 E-value=11 Score=38.54 Aligned_cols=81 Identities=11% Similarity=0.011 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHH--
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFL-- 103 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~-- 103 (381)
+...+.+.-++.++|.|..- .....+..-++++ +|.+..+++-.+.++|.++++.+++++ .++||+.=+-
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~k------ER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln 185 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPS------RYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLN 185 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHH
Confidence 45566667778888888876 7777777777643 378888999999999999999999884 4678875443
Q ss_pred -HHHHHHHHHHH
Q 016875 104 -ISSVATLIGLI 114 (381)
Q Consensus 104 -i~~i~m~~~l~ 114 (381)
|+...+.++++
T Consensus 186 ~Isl~s~~~a~~ 197 (511)
T TIGR00806 186 IISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHH
Confidence 44455555544
No 217
>PRK08319 cobalt transport protein CbiM; Validated
Probab=56.50 E-value=1.6e+02 Score=26.83 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhcCchhHH
Q 016875 335 SFQYCIFGIADMFTFVGLLEFFYKEAPAGMRT 366 (381)
Q Consensus 335 v~~y~l~~~~E~~~~~~glef~~~~aP~~m~s 366 (381)
.++++.+++.|.++.-....+..+.-|+-+++
T Consensus 183 ~~~~l~l~~~Eg~itg~~v~~l~~~rP~~l~t 214 (224)
T PRK08319 183 AVTQIPLAIAEGLLTVLIFNYLTKYRPDLLVK 214 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHhh
Confidence 45667899999999999999999999997764
No 218
>TIGR00123 cbiM cobalamin biosynthesis protein CbiM. In Methanobacterium thermoautotrophicum, Archaeoglobus fulgidus, and Methanococcus jannaschii, a second homolog of cbiM is also found. These cbiM-related proteins appear to represent a distinct but less well-conserved orthologous group. Still more distant homologs include sll0383 from Synechocystis sp. and HI1621 from Haemophilus influenzae; the latter protein, from a species that does not synthesize cobalamin, is the most divergent member of the group. The functions of and relationships among the set of proteins homologous to cbiM have not been determined.
Probab=56.23 E-value=1.2e+02 Score=27.45 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchh
Q 016875 332 FWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGM 364 (381)
Q Consensus 332 ~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m 364 (381)
....+.++.+++.|-.+......|..|..|+-.
T Consensus 180 ~~~~~~h~~~~i~Eg~iT~~~~~~l~~~~p~~l 212 (214)
T TIGR00123 180 GIFAYTQVPLAIAEGLLTVMIYDYITKLRPDTL 212 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhh
Confidence 444456677899999999999999999999854
No 219
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=55.88 E-value=44 Score=34.23 Aligned_cols=94 Identities=17% Similarity=0.073 Sum_probs=64.5
Q ss_pred chhHHHHHHHHHHHhccc---ccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhH
Q 016875 25 AIAAYFYGSLYLYSLGCG---GNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLG 101 (381)
Q Consensus 25 ~~~~~~~~~L~lia~G~G---~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~ 101 (381)
.....+..++.-...|.+ +.-.++..+.-+.....+.+.+. ..+-++|+=-..++|++++.++.+.+.|.+|.+..
T Consensus 43 ~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~-~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~ 121 (513)
T KOG0254|consen 43 VILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGE-YSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKT 121 (513)
T ss_pred hHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 455666667777777873 44445544444444333321100 01456899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 016875 102 FLISSVATLIGLIALAIG 119 (381)
Q Consensus 102 F~i~~i~m~~~l~~f~~g 119 (381)
+.++.+...++.++....
T Consensus 122 l~~~~~~~~iG~ii~~~a 139 (513)
T KOG0254|consen 122 LLLAVVLFLIGAIIIALA 139 (513)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999888888777655543
No 220
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=54.20 E-value=1.3e+02 Score=30.36 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=64.3
Q ss_pred CCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHH
Q 016875 291 TQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLH 370 (381)
Q Consensus 291 s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g 370 (381)
+|-+=|++|++++++.++..+.. .|++-++..+++.|.-+-...|..-..++.=-|++-||...+
T Consensus 92 npr~fm~~gLilsai~nil~Gfs---------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~s 156 (448)
T COG2271 92 NPRYFMAFGLILSAIVNILFGFS---------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWS 156 (448)
T ss_pred CCceeehHHHHHHHHHHHHHhhh---------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEE
Confidence 45556789999999988876533 267777888899999999999999999999999999999999
Q ss_pred HHHHHhhccC
Q 016875 371 LHFCHCHLAT 380 (381)
Q Consensus 371 ~~~l~~a~G~ 380 (381)
+|..+..+|.
T Consensus 157 iWn~shNiGG 166 (448)
T COG2271 157 IWNTSHNIGG 166 (448)
T ss_pred Eehhhhhccc
Confidence 9999988875
No 221
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=53.87 E-value=17 Score=36.15 Aligned_cols=77 Identities=19% Similarity=0.133 Sum_probs=50.6
Q ss_pred HhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHH-HHHHHHHhhhheeEeeccc------chhHHHHHHHHHH
Q 016875 38 SLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT-TLAAMIGVTAIVYVFIDQG------WWLGFLISSVATL 110 (381)
Q Consensus 38 a~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~i-NiGa~~a~~~~~~i~~~~g------~~~~F~i~~i~m~ 110 (381)
++..|.+-.....++.++.+++. |.++=.+|.... -+|..++.++.+++-|++| |...|.++++..+
T Consensus 312 G~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~ 385 (400)
T PF03825_consen 312 GLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMAL 385 (400)
T ss_pred hHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHH
Confidence 44445555555555655554432 445555555543 4899999999999988765 5567777887777
Q ss_pred HHHHHHhhcc
Q 016875 111 IGLIALAIGK 120 (381)
Q Consensus 111 ~~l~~f~~g~ 120 (381)
+..++|+...
T Consensus 386 ~~~~~f~~~f 395 (400)
T PF03825_consen 386 VILVLFVILF 395 (400)
T ss_pred HHHHHHHhhc
Confidence 7777777653
No 222
>PRK06265 cobalt transport protein CbiM; Validated
Probab=50.40 E-value=1.8e+02 Score=25.80 Aligned_cols=69 Identities=7% Similarity=-0.000 Sum_probs=42.3
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHH--HHHHHHHHHHHHHHhhhhhHHHHHhhcCchhH
Q 016875 294 QRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFW--LSFQYCIFGIADMFTFVGLLEFFYKEAPAGMR 365 (381)
Q Consensus 294 ~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~w--lv~~y~l~~~~E~~~~~~glef~~~~aP~~m~ 365 (381)
.+...|++-..++....++.-.-....... .+....+ .++.++.+++.|.++......+..+.-|+-.+
T Consensus 128 ~~~~~~f~~~~l~v~~~~l~~~~~l~l~~~---~~~~~~~~~~~~~~~~l~~~Eg~ltg~~v~~l~~~rP~~l~ 198 (199)
T PRK06265 128 PRGLAAFLAGALAVFLAALLCALELALSGG---FPFVPAAKLLGLAHLPLMVIEGIITAFAVSFLARVRPELLK 198 (199)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhcc
Confidence 456677777777776555543222222211 2222222 22445666777999999999999999988654
No 223
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=49.48 E-value=1.7e+02 Score=25.03 Aligned_cols=48 Identities=4% Similarity=0.028 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhh
Q 016875 330 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCH 377 (381)
Q Consensus 330 s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a 377 (381)
+.+.++|.-+++|+++.+.....-.+.++.+.++-++.-.|+++....
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~ 135 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQ 135 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHH
Confidence 356788999999999999999999999999999999999998887643
No 224
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=49.42 E-value=40 Score=34.34 Aligned_cols=73 Identities=14% Similarity=0.200 Sum_probs=56.5
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHH
Q 016875 294 QRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHF 373 (381)
Q Consensus 294 ~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~ 373 (381)
+-++.+.++++++-+...... ..+.+.++..=+++|++|-...|.--....+=+|+.-|+...++-+
T Consensus 104 ~v~~~~~~~sa~~t~l~P~aa-------------~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~ 170 (466)
T KOG2532|consen 104 RVFFISGLISALLTLLTPLAA-------------SIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILT 170 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------------HhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHH
Confidence 346677777776655544332 2344466788899999999999999999999999999999999888
Q ss_pred HHhhcc
Q 016875 374 CHCHLA 379 (381)
Q Consensus 374 l~~a~G 379 (381)
...-+|
T Consensus 171 ~g~q~g 176 (466)
T KOG2532|consen 171 AGSQLG 176 (466)
T ss_pred HHHHHH
Confidence 776554
No 225
>PRK11462 putative transporter; Provisional
Probab=48.13 E-value=21 Score=36.01 Aligned_cols=62 Identities=15% Similarity=0.088 Sum_probs=34.7
Q ss_pred HHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhH-HHHHHHHHHHHHHHHhhhheeE
Q 016875 31 YGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY-FNFYLFATTLAAMIGVTAIVYV 92 (381)
Q Consensus 31 ~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~-f~~fY~~iNiGa~~a~~~~~~i 92 (381)
++...+..+|.|..-+-..++.+|--|.++-+-.++++.. |+-+-+..++|..++..+.+++
T Consensus 322 ~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 322 FVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445555556555556788887775543322334433 5555566777776666555443
No 226
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=46.25 E-value=24 Score=35.90 Aligned_cols=88 Identities=10% Similarity=-0.009 Sum_probs=62.0
Q ss_pred HHHHHhccccccc--------ccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875 34 LYLYSLGCGGNRG--------TLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS 105 (381)
Q Consensus 34 L~lia~G~G~~k~--------nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~ 105 (381)
..++.-|.|++-- -+..+.+..|-+.+.+.-+-.+..=.--+..-|+|-++|-+.-+|+.|.+|-.-+++..
T Consensus 41 k~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~ 120 (538)
T KOG0252|consen 41 KAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKE 120 (538)
T ss_pred HHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHH
Confidence 3455567776642 34555666665544211112233445567889999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccce
Q 016875 106 SVATLIGLIALAIGKPFY 123 (381)
Q Consensus 106 ~i~m~~~l~~f~~g~~~y 123 (381)
.+.|+++.+ .++-++.
T Consensus 121 liImIi~t~--~~~~s~~ 136 (538)
T KOG0252|consen 121 LIIMIICSA--LSGLSVG 136 (538)
T ss_pred HHHHHHHHH--HhccCCC
Confidence 999999987 5565544
No 227
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=45.51 E-value=1.9e+02 Score=29.04 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=41.3
Q ss_pred ccchH-HHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 327 KQISL-FWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 327 ~~~s~-~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
.+... ...+-+|.+.+..---..++++.|..+.||+...|..|.+-.--.-+|
T Consensus 364 ~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLG 417 (510)
T KOG3574|consen 364 FPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLG 417 (510)
T ss_pred eeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhc
Confidence 44433 345568899999888899999999999999999999998765444443
No 228
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=42.86 E-value=1.6e+02 Score=29.94 Aligned_cols=50 Identities=20% Similarity=0.181 Sum_probs=40.2
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHH
Q 016875 67 LASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 116 (381)
Q Consensus 67 ~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f 116 (381)
|...+..-.-++-.|..+++.+.+++.+.+|+...|.++++..+++++--
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~ 195 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYM 195 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 56666666666667888889999999999999999999998887777633
No 229
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=42.67 E-value=74 Score=32.66 Aligned_cols=93 Identities=12% Similarity=0.040 Sum_probs=63.3
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCCCccchHHHHHHHHH
Q 016875 260 LPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYC 339 (381)
Q Consensus 260 ~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g~~~~s~~wlv~~y~ 339 (381)
..++.-.++.|++..+ -+|.+ +.-+-+..|.++++++-++...+|.+ ++ =+.++++..++
T Consensus 79 a~slg~~i~~liF~~W----s~k~~------~~k~Pli~s~ii~~~g~llY~~l~~~----~~------~~~y~mL~~R~ 138 (488)
T KOG2325|consen 79 ASSLGHAIFSLIFGIW----SNKTG------SVKKPLIVSFLIAIIGNLLYLALAYV----PN------GVKYLMLVARI 138 (488)
T ss_pred HHHHHHHhcchhhccc----ccccC------CcccCHHHHHHHHHHHHHHHHHHHhc----cc------chHHHHHHHHH
Confidence 3567777888888863 12322 33445788999999998888777731 11 16889999999
Q ss_pred HHHHH-HHHhhhhhHHHHHhhcCchhHHHHHHHH
Q 016875 340 IFGIA-DMFTFVGLLEFFYKEAPAGMRTLLLHLH 372 (381)
Q Consensus 340 l~~~~-E~~~~~~glef~~~~aP~~m~s~~~g~~ 372 (381)
+.|+| -.+..-=.+--..+-.++|+|+++.+..
T Consensus 139 l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~ 172 (488)
T KOG2325|consen 139 LTGVGVGNFAVLRAYIADASTVEDRPRAFAATSG 172 (488)
T ss_pred HcCcCcccHHHHHHHHHhccCccchHHHHHHhhh
Confidence 99999 4444444444445577888888877665
No 230
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=41.13 E-value=22 Score=36.42 Aligned_cols=91 Identities=13% Similarity=0.068 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee------c---c-
Q 016875 27 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI------D---Q- 96 (381)
Q Consensus 27 ~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~------~---~- 96 (381)
.+.+.....+..+|.++.-|...++..+.-+++ .+...-..++...++|+.++..+..+... . .
T Consensus 379 ~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~------~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~ 452 (489)
T PRK10207 379 PWFIVLVYLFQSLGELFISALGLAMIAALVPQH------LMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLP 452 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhh
Confidence 344556677788888888777777776654332 35667778888889999888777644321 1 1
Q ss_pred cchhHHHHHHHHHHHHHHHHhhcccce
Q 016875 97 GWWLGFLISSVATLIGLIALAIGKPFY 123 (381)
Q Consensus 97 g~~~~F~i~~i~m~~~l~~f~~g~~~y 123 (381)
.+..-|..-++..++..++++...|++
T Consensus 453 ~~~~~f~~~~~~~~~~~v~~~~~~~~~ 479 (489)
T PRK10207 453 VYTNVFGKIGLVTLGVAVVMALMVPWL 479 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 255666655554444444444434434
No 231
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=41.05 E-value=41 Score=34.34 Aligned_cols=38 Identities=8% Similarity=0.226 Sum_probs=30.3
Q ss_pred cccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEe
Q 016875 50 ALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 93 (381)
Q Consensus 50 ~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~ 93 (381)
++..|.++.++ -.++|..+..+-|+|.++|+.++.++.
T Consensus 152 ~fandi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 152 GFANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666543 569999999999999999998887764
No 232
>PRK11909 cobalt transport protein CbiM; Provisional
Probab=37.42 E-value=3.3e+02 Score=24.94 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHH-HHHHHHhhhhhHHHHHhhcCchhH
Q 016875 330 SLFWLSFQYCIF-GIADMFTFVGLLEFFYKEAPAGMR 365 (381)
Q Consensus 330 s~~wlv~~y~l~-~~~E~~~~~~glef~~~~aP~~m~ 365 (381)
+.--+++..+.+ ++.|-.+.....+|..|..|+.+-
T Consensus 182 ~~~~~~~~h~~i~~i~Eg~iT~~~~~~l~~~~~~~~l 218 (230)
T PRK11909 182 SIPAMLFAHLTVAGIVEAIVTGLVVYYLQKADEENLL 218 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHh
Confidence 344566677777 999999999999999999666553
No 233
>PTZ00207 hypothetical protein; Provisional
Probab=36.84 E-value=39 Score=35.59 Aligned_cols=84 Identities=17% Similarity=0.098 Sum_probs=55.0
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHH-HhhhheeEeecccchhHHHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMI-GVTAIVYVFIDQGWWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~-a~~~~~~i~~~~g~~~~F~i 104 (381)
+.+.+++...+..+|.|.+-+.......+.|++ +|.....+...+.++|+.+ +++...++.+ +|+..|.+
T Consensus 119 s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-------~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~ 189 (591)
T PTZ00207 119 SVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS-------NRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFF 189 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHH
Confidence 456667777788888887777666777777742 2677889999999999964 5666666553 45555544
Q ss_pred -HHHHHHHHHHHHhh
Q 016875 105 -SSVATLIGLIALAI 118 (381)
Q Consensus 105 -~~i~m~~~l~~f~~ 118 (381)
+.++.+++++.+..
T Consensus 190 l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 190 LMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHhh
Confidence 33444444444433
No 234
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=31.60 E-value=43 Score=34.20 Aligned_cols=58 Identities=16% Similarity=0.244 Sum_probs=42.9
Q ss_pred ccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHH
Q 016875 49 PALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLI 111 (381)
Q Consensus 49 ~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~ 111 (381)
...+.++|++ +. ++.+++.-+...+|+.+++..++.+.+-++.||..+-.+.-+.+++
T Consensus 288 k~~v~~~~p~--~~---~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 288 KSKLKAQYPS--PN---EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHCCC--HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3555777753 32 3789999999999999977777778888999999777664444444
No 235
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=30.24 E-value=6.3e+02 Score=26.05 Aligned_cols=86 Identities=21% Similarity=0.189 Sum_probs=55.7
Q ss_pred hhHHHHHHHH-HHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHH
Q 016875 26 IAAYFYGSLY-LYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLI 104 (381)
Q Consensus 26 ~~~~~~~~L~-lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i 104 (381)
+.+.+|+... +..+|.|+.-.-....++.-|+++. .+..++. -.+.-+|.++=+.+.-++-+++||+.++.+
T Consensus 133 ~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR-----~lA~Gia--~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~ 205 (509)
T KOG2504|consen 133 SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKR-----ALATGIA--VSGTGVGTVVFPPLLKYLLSKYGWRGALLI 205 (509)
T ss_pred hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHH-----HHHHhhh--hccCCcceeeHHHHHHHHHHHhCcHHHHHH
Confidence 4556666664 3678889888777777775555422 1333333 356667777777777888899999999987
Q ss_pred HHHHHHHHHHHHhh
Q 016875 105 SSVATLIGLIALAI 118 (381)
Q Consensus 105 ~~i~m~~~l~~f~~ 118 (381)
=+..++-.++.-+.
T Consensus 206 ~~~~~l~~~~~~~~ 219 (509)
T KOG2504|consen 206 FGGISLNVLVAGAL 219 (509)
T ss_pred HHHHHHHHHHHHHH
Confidence 66555433333333
No 236
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=27.55 E-value=19 Score=35.66 Aligned_cols=66 Identities=21% Similarity=0.182 Sum_probs=47.2
Q ss_pred ccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHH
Q 016875 43 GNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 114 (381)
Q Consensus 43 ~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~ 114 (381)
+.-+....+.+|.|+.+. |..+..+.+...++|+++++.+.+++.++.+-...|.+-++.++++.+
T Consensus 365 g~~~~~~~~~~ElfPt~~------R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i 430 (451)
T PF00083_consen 365 GWGPLPWIYTAELFPTKV------RSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAII 430 (451)
T ss_pred cccccccccccccccccc------cccccccccccccccccccccccccccccccccccchhhHHHHHHHHh
Confidence 344666677788887543 788888989999999999999999999888744455544444444443
No 237
>PF01307 Plant_vir_prot: Plant viral movement protein; InterPro: IPR001896 This family of membrane/coat proteins are found in a number of different ssRNA plant virus families that include Potexvirus, Hordeivirus and Carlavirus.
Probab=23.84 E-value=67 Score=25.56 Aligned_cols=29 Identities=10% Similarity=0.275 Sum_probs=24.6
Q ss_pred cchhHHHHHHHHHHHHHHHHhhcccceee
Q 016875 97 GWWLGFLISSVATLIGLIALAIGKPFYRI 125 (381)
Q Consensus 97 g~~~~F~i~~i~m~~~l~~f~~g~~~y~~ 125 (381)
++...+.++++++.++++++.+.++.+.+
T Consensus 6 d~sk~~l~~aiG~~lal~i~~ltr~tlPh 34 (104)
T PF01307_consen 6 DYSKSYLAAAIGVSLALIIFTLTRSTLPH 34 (104)
T ss_pred CCccchhHHHHHHHHHHHHHHhhcCCCCC
Confidence 46678899999999999999999887654
No 238
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=22.31 E-value=94 Score=31.46 Aligned_cols=38 Identities=16% Similarity=0.030 Sum_probs=30.8
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhheeEeeccc-----chhHHHH
Q 016875 67 LASYFNFYLFATTLAAMIGVTAIVYVFIDQG-----WWLGFLI 104 (381)
Q Consensus 67 ~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g-----~~~~F~i 104 (381)
+...|..+....|+|..+++.+.+++.+..| |..-+..
T Consensus 385 egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~ 427 (468)
T TIGR00788 385 ESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLL 427 (468)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHH
Confidence 5788999999999999999998888888777 5554443
No 239
>PF12650 DUF3784: Domain of unknown function (DUF3784); InterPro: IPR017259 This group represents an uncharacterised conserved protein.
Probab=21.92 E-value=2.1e+02 Score=22.00 Aligned_cols=19 Identities=11% Similarity=0.394 Sum_probs=8.5
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q 016875 68 ASYFNFYLFATTLAAMIGV 86 (381)
Q Consensus 68 ~~~f~~fY~~iNiGa~~a~ 86 (381)
.+....+...+.+..+++.
T Consensus 43 ~r~~g~~~~~~~i~~li~~ 61 (97)
T PF12650_consen 43 CRFMGKFMLIIGIILLIGG 61 (97)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444454444444444433
No 240
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=21.75 E-value=1.2e+02 Score=29.71 Aligned_cols=97 Identities=9% Similarity=-0.021 Sum_probs=58.3
Q ss_pred cchhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHH-HHHHHHHHHHhhhheeEeecccc--hh
Q 016875 24 GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-FATTLAAMIGVTAIVYVFIDQGW--WL 100 (381)
Q Consensus 24 ~~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY-~~iNiGa~~a~~~~~~i~~~~g~--~~ 100 (381)
-.+...+++|=++-.+++-..-..--+=...+.++++-+ ++....-|..-- +...+-+..+.+++-++.+..|. ..
T Consensus 118 ~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~-~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~va 196 (354)
T PF05631_consen 118 SSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFP-QEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVA 196 (354)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcc
Confidence 345778888888888888887766655544444443321 112334444322 22234456666666566666655 67
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q 016875 101 GFLISSVATLIGLIALAIGKP 121 (381)
Q Consensus 101 ~F~i~~i~m~~~l~~f~~g~~ 121 (381)
.|..+.+..+++.++....++
T Consensus 197 PF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 197 PFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred hHHHHHHHHHHHHHHHHhccc
Confidence 888888888777766554443
No 241
>PF11027 DUF2615: Protein of unknown function (DUF2615); InterPro: IPR020309 This entry represents a group of uncharacterised protein from the Metazoa, including CD034 (or C4orf34) and YQF4 (or C34C12.4).
Probab=21.53 E-value=1.2e+02 Score=24.12 Aligned_cols=27 Identities=7% Similarity=0.118 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHHHHHHhhcccceeec
Q 016875 100 LGFLISSVATLIGLIALAIGKPFYRIQ 126 (381)
Q Consensus 100 ~~F~i~~i~m~~~l~~f~~g~~~y~~~ 126 (381)
-.|.+..+.|+++++.|+++=+.++..
T Consensus 54 ~~~~~~~~w~~~A~~ly~~RP~s~R~~ 80 (103)
T PF11027_consen 54 SMFMMMMLWMVLAMALYLLRPSSLRSR 80 (103)
T ss_pred cHHHHHHHHHHHHHHHHHcCchhhcCC
Confidence 456677788899999998876666654
No 242
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=21.27 E-value=1.5e+02 Score=30.18 Aligned_cols=68 Identities=13% Similarity=0.028 Sum_probs=44.1
Q ss_pred chhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhh-hHHHHHHHHHHHHHHHHhhhheeE
Q 016875 25 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA-SYFNFYLFATTLAAMIGVTAIVYV 92 (381)
Q Consensus 25 ~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~-~~f~~fY~~iNiGa~~a~~~~~~i 92 (381)
.+..+.++...+..+|.|..-+-.-++++|--|.++-+--+|++ -.|+.+=+..=+|..++..+.+++
T Consensus 325 ~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 325 GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677778888888999999999999999987765443222233 344555555555666665544433
No 243
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=21.15 E-value=6.7 Score=39.02 Aligned_cols=80 Identities=13% Similarity=0.162 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEee---cccchhHH
Q 016875 26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI---DQGWWLGF 102 (381)
Q Consensus 26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~---~~g~~~~F 102 (381)
+...+.++-.+..+|.|+.-+....+..|.-+++ .|.....++..+.++|.+++.++...+.+ +.+|+..+
T Consensus 101 ~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~------~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~ 174 (451)
T PF00083_consen 101 NFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPK------HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILL 174 (451)
T ss_pred cccccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccc
Confidence 5677778888899999998888888877655432 25566677777788888888766544433 35699998
Q ss_pred HHHHHHHHH
Q 016875 103 LISSVATLI 111 (381)
Q Consensus 103 ~i~~i~m~~ 111 (381)
.++++..++
T Consensus 175 ~~~~~~~l~ 183 (451)
T PF00083_consen 175 IFGAIPSLL 183 (451)
T ss_pred ccccccccc
Confidence 877765543
No 244
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=20.96 E-value=1.9e+02 Score=31.39 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=61.6
Q ss_pred cchhhhhHHHHHHHHHHHHHHHH----HHhhhcc-------C---------C-----------CC----ccchHHH--HH
Q 016875 293 LQRVGVGLVLSVISMTIAGFVEV----KRRNAFN-------Q---------S-----------PP----KQISLFW--LS 335 (381)
Q Consensus 293 l~ki~iG~~l~~ls~~~~~~~e~----~~~~~~~-------~---------~-----------g~----~~~s~~w--lv 335 (381)
++-+|+|.++++++.++.++-+. ++++... + + +. ..-+..| ++
T Consensus 162 Pr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff 241 (735)
T KOG3626|consen 162 PRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFF 241 (735)
T ss_pred cceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHH
Confidence 46799999999999988876641 1111000 0 0 00 1112233 44
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhcc
Q 016875 336 FQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 379 (381)
Q Consensus 336 ~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G 379 (381)
..-++.|+|+.-+.+.|..++=+-+-++-.++..|+.+....+|
T Consensus 242 ~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lG 285 (735)
T KOG3626|consen 242 LGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILG 285 (735)
T ss_pred HHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhh
Confidence 56699999999999999999999999999999999988776665
No 245
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=20.48 E-value=6.8e+02 Score=25.72 Aligned_cols=155 Identities=11% Similarity=-0.008 Sum_probs=80.7
Q ss_pred HHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhhccCCCcCCccccCCc---ccccchHHHHHHHHHHHHHHHHHhhhhcCC
Q 016875 210 KILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPS---IPVLPLLFMAILIPIYEFLFVPFARKITGH 286 (381)
Q Consensus 210 k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~~~d~~i~g~~ip~~~---~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~ 286 (381)
.+++++.-+....-+.|+.-.+..|-+.++. .+|-+| +.-..|+.=++..|+.......+-.|.++|
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l----------Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRR 101 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL----------GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRR 101 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc----------CCCcccccccccccccccceecccccccccccccccccc
Confidence 4555666666667778887777666665543 244444 334556666667777766554443455443
Q ss_pred CCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccCCC--CccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhc-Cch
Q 016875 287 PAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSP--PKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEA-PAG 363 (381)
Q Consensus 287 ~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~~g--~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~a-P~~ 363 (381)
+| =|..|-++..+++.........-....++.. ..+-.+.-.+..+.|+-++-=++--..=++..+.+ |+.
T Consensus 102 --RP----fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~ 175 (498)
T KOG0637|consen 102 --RP----FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA 175 (498)
T ss_pred --cc----hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh
Confidence 12 2455555555565544333211111111111 11234444445555555554333333445555554 344
Q ss_pred hHHHHHHHHHHHhhccC
Q 016875 364 MRTLLLHLHFCHCHLAT 380 (381)
Q Consensus 364 m~s~~~g~~~l~~a~G~ 380 (381)
.+....+.+-+..|+||
T Consensus 176 ~~~~Ans~f~~f~avGn 192 (498)
T KOG0637|consen 176 KKTRANSVFSFFMAVGN 192 (498)
T ss_pred hhhccchhHHHHHHhcc
Confidence 44448888888888887
No 246
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=20.37 E-value=1.3e+02 Score=26.46 Aligned_cols=77 Identities=22% Similarity=0.250 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHH-HHHHHHHHHhhhheeEe--ecccchhHHHH
Q 016875 28 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF-ATTLAAMIGVTAIVYVF--IDQGWWLGFLI 104 (381)
Q Consensus 28 ~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~-~iNiGa~~a~~~~~~i~--~~~g~~~~F~i 104 (381)
..+.+.-.+..++.|..-|...+...|.+++ . +++...+.++.. ..++|..+++.+.+++. +..+|+..|.+
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 3444444446778888888889999998876 2 235566666666 46667666665444333 34678886665
Q ss_pred HHHHH
Q 016875 105 SSVAT 109 (381)
Q Consensus 105 ~~i~m 109 (381)
.....
T Consensus 170 ~~~~~ 174 (338)
T COG0477 170 AALLG 174 (338)
T ss_pred HHHHH
Confidence 55443
No 247
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=20.34 E-value=2.2e+02 Score=22.88 Aligned_cols=49 Identities=22% Similarity=0.268 Sum_probs=35.3
Q ss_pred hhHHHHHHHHHH-HHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHH
Q 016875 68 ASYFNFYLFATT-LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 116 (381)
Q Consensus 68 ~~~f~~fY~~iN-iGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f 116 (381)
++..+|....++ ++.+++...++.-.++-||-+|.....+-+++.+++=
T Consensus 36 e~~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~lis 85 (116)
T PF12670_consen 36 ESILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLIS 85 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 456677655555 5777888888888888999999988776665554433
Done!