BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016876
(381 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 168/382 (43%), Gaps = 47/382 (12%)
Query: 2 RFPSNAKVSDVTMNCNAETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTS 61
++ SN + + + + F V +T +RI ++ F + NH+L VV D +
Sbjct: 185 KYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGN 244
Query: 62 YTKPFPTSVIMIAPGQTTNVLLTADQPPARXXXXXXXXXXXXXXXXXXXXXXILEYKSAP 121
Y +PF TS I I G++ +VL+T DQ P+ +L Y
Sbjct: 245 YVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLT--LLNY---- 298
Query: 122 FNGKKGKSRSSAPIFPILPGFNDXXXXXXXXXRI-KSLHQVQVPTVIDENLFFTVGLGLI 180
K +S P P P ++D RI ++ + P + +F +I
Sbjct: 299 LPNSVSKLPTSPP--PQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVI 356
Query: 181 NCSNPNSPRCQGPNGTRFAASINNISFVFP-------RRNSLMQAYIQGQP-GIFTTDFP 232
N +IN++S P + +L+ A+ Q P +F D+
Sbjct: 357 N--------------GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYD 402
Query: 233 PVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVS---VEDHPMHLHGH 289
P + T R +Y+ K G V ++ Q+ +++ E HP HLHGH
Sbjct: 403 IDTPPTNEKT----------RIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGH 452
Query: 290 EFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPGIWLLHCHIDS 349
+F+V+G G G F+ + + + NL +PP RNT+ P GW A+RFVA+NPG+W HCHI+
Sbjct: 453 DFWVLGYGDGKFS-AEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEP 511
Query: 350 HLTWGLAMAFLVENGVGKLQTV 371
HL G+ + F GV K+ +
Sbjct: 512 HLHMGMGVVF--AEGVEKVGRI 531
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 282 HPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPGIW 341
HP+HLHGH+F++V FN AKFNL++PPRR+ P G++A+ F +NPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 342 LLHCHIDSHLTWGLAMAFL 360
LLHCHI H + GLAM F+
Sbjct: 523 LLHCHIAWHASEGLAMQFV 541
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 15 NCNAETVRFPVE--AGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIM 72
NC +F + G LR+IN ++ F + NH LTV+ D P+ T ++
Sbjct: 245 NCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLL 304
Query: 73 IAPGQTTNVLLTAD 86
I GQ +V++ A+
Sbjct: 305 IGIGQRYDVIVEAN 318
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 282 HPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPGIW 341
HP+HLHGH+F++V FN AKFNL++PPRR+ P G++A+ F +NPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 342 LLHCHIDSHLTWGLAMAFL 360
LLHCHI H + G+AM F+
Sbjct: 523 LLHCHIAWHASEGMAMQFV 541
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 15 NCNAETVRFPVE--AGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIM 72
NC +F + G LR+IN ++ F + NH LTV+ D P+ T ++
Sbjct: 245 NCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLL 304
Query: 73 IAPGQTTNVLLTAD 86
I GQ +V++ A+
Sbjct: 305 IGIGQRYDVIVEAN 318
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 282 HPMHLHGHEFYVVGSGLGN---------FNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVR 332
HPMHLHGH+F V+G F+P+ D A+ N +PPRR+T P GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 333 FVAENPGIWLLHCHIDSHLTWGLAMAFL 360
F +NPG WL HCHI H++ GL++ FL
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 3 FPSNAKVSDVTMNCN---AETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVD 59
F N ++ +N N + + G+ LRI+N++ + NH +TV+ D
Sbjct: 194 FSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAAD 253
Query: 60 TSYTKPFPTSVIMIAPGQTTNVLLTADQPP 89
+ +A GQ +V++ A + P
Sbjct: 254 MVPVNAMTVDSLFLAVGQRYDVVIDASRAP 283
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 282 HPMHLHGHEFYVVGSGLGN---------FNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVR 332
HPMHLHGH+F V+G F+P+ D A+ N +PPRR+T P GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 333 FVAENPGIWLLHCHIDSHLTWGLAMAFL 360
F +NPG WL HCHI H++ GL++ FL
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 3 FPSNAKVSDVTMNCN---AETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVD 59
F N ++ +N N + + G+ LRI+N++ + NH +TV+ D
Sbjct: 194 FSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAAD 253
Query: 60 TSYTKPFPTSVIMIAPGQTTNVLLTADQPP 89
+ +A GQ +V++ A + P
Sbjct: 254 MVPVNAMTVDSLFLAVGQRYDVVIDASRAP 283
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 282 HPMHLHGHEFYVVGSGLGN---------FNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVR 332
HPMHLHGH+F V+G F+P+ D A+ N +PPRR+T P GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 333 FVAENPGIWLLHCHIDSHLTWGLAMAFL 360
F +NPG WL HCHI H++ GL++ FL
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 3 FPSNAKVSDVTMNCN---AETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVD 59
F N ++ +N N + + G+ LRI+N++ + NH +TV+ D
Sbjct: 194 FSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAAD 253
Query: 60 TSYTKPFPTSVIMIAPGQTTNVLLTADQPP 89
+ +A GQ +V++ A + P
Sbjct: 254 MVPVNAMTVDSLFLAVGQRYDVVIDASRAP 283
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 130/336 (38%), Gaps = 65/336 (19%)
Query: 25 VEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLT 84
V++G+ RI++++ + F + H++TV+ VD +P + I GQ +V++
Sbjct: 216 VQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVE 275
Query: 85 ADQPPARXXXXXXXXXXXXXXXXXXXXXXILEYKSAPFNGKKGKSRSSAPIFPILPGFND 144
A+Q ++ P NG+ G + G N
Sbjct: 276 ANQAVGN-----------------------YWIRANPSNGRNGFTG----------GINS 302
Query: 145 XXXXXXXXXRIKSLHQVQVPTVIDENLFFTVGLGLINCSNPNSPRCQGPNGTRFAASINN 204
+ T ++E LI NP +P P G N
Sbjct: 303 AIFRYQGAAVAEPTTSQNSGTALNE-------ANLIPLINPGAPGNPVPGGADI-----N 350
Query: 205 ISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYTGNVSRGLWQPRKRTKLYKLKFG 264
++ R + I G P I PP P++ + G+ P +
Sbjct: 351 LNLRIGRNATTADFTINGAPFI-----PPTVPVLL----QILSGVTNPNDLLPGGAVISL 401
Query: 265 SRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTP 324
Q++ + SI +HP HLHGH F VV + ++ +N ++P RR+ +
Sbjct: 402 PANQVI--EISIPGGGNHPFHLHGHNFDVV--------RTPGSSVYNYVNPVRRDVVSIG 451
Query: 325 PGGW-VAVRFVAENPGIWLLHCHIDSHLTWGLAMAF 359
GG V RFV +NPG W LHCHID HL GLA+ F
Sbjct: 452 GGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVF 487
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVED-----HPMHLHGHEFYVVGSGLGNFNPSTDTAKFN 311
+Y L S +++ F T++ V + HP HLHGH F VV S ++ +N
Sbjct: 370 SVYTLPLNSTIELSFPITTVNGVTNAPGAPHPFHLHGHAFSVVRSA--------GSSDYN 421
Query: 312 LIDPPRRNTIGTP-PGGWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAF 359
++P RR+T+ T PG V +RF +N G W LHCHID HL G A+ F
Sbjct: 422 YVNPVRRDTVSTGNPGDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIVF 470
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 282 HPMHLHGHEFYVVG--------SGLGN-FNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVR 332
HPMHLHGH+F V+G +G+ + F+P+ D + +P RR+ P GGW+ +
Sbjct: 472 HPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLA 531
Query: 333 FVAENPGIWLLHCHIDSHLTWGLAMAFL 360
F +NPG WL HCHI H++ GL++ FL
Sbjct: 532 FKTDNPGAWLFHCHIAWHVSGGLSVDFL 559
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 28 GETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQ 87
G+ LRIIN++ + + H +TV+ D F S + +A GQ +V + A+
Sbjct: 263 GKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANS 322
Query: 88 P 88
P
Sbjct: 323 P 323
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 258 LYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPR 317
+Y L + ++I F TS + HP HLHGH F VV S + +N DP
Sbjct: 371 VYSLPSDANIEISFPATSAAAGGPHPFHLHGHAFAVV--------RSAGSTTYNYNDPIF 422
Query: 318 RNTI--GTPPGGW-VAVRFVAENPGIWLLHCHIDSHLTWGLAMAF 359
R+T+ GTP V +RF NPG W LHCHID HL G A+ F
Sbjct: 423 RDTVSTGTPAANDNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVF 467
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 37/71 (52%)
Query: 17 NAETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPG 76
+A+ V AG+ R+++++ + + F + H++T++ VD+ +P I I
Sbjct: 182 SADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAA 241
Query: 77 QTTNVLLTADQ 87
Q + +L A+Q
Sbjct: 242 QRYSFILNANQ 252
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPP 316
+Y L S ++I T++ HP HLHGH F VV S + +N DP
Sbjct: 370 SVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSA--------GSTTYNYNDPI 421
Query: 317 RRNTI--GTPPGGW-VAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQP 373
R+ + GTP G V +RF +NPG W LHCHID HL G A+ F + V ++ P
Sbjct: 422 FRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAED--VADVKAANP 479
Query: 374 PP 375
P
Sbjct: 480 VP 481
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 25 VEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLT 84
V+ G+ R+++ + + + F + H LTV+ VD ++P I I Q + +L
Sbjct: 190 VQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLN 249
Query: 85 ADQ 87
A+Q
Sbjct: 250 ANQ 252
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 80/170 (47%), Gaps = 26/170 (15%)
Query: 194 NGTRFAASIN-NISFVFPRRNSLMQAYIQGQPGIFTTDFPPVPPIIFDYT--GNVSRGLW 250
N T+ A +N N++F F N +I G+ FT PP P++ N ++ L
Sbjct: 315 NPTQGGADLNLNMAFNFDGTN----FFINGES--FT---PPTVPVLLQIISGANTAQDL- 364
Query: 251 QPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKF 310
+Y L S ++I F T+ HP HLHGH F VV S + +
Sbjct: 365 --LPSGSVYSLPSNSSIEITFPATTAAPGAPHPFHLHGHVFAVVRSA--------GSTSY 414
Query: 311 NLIDPPRRNTI--GTPPGGW-VAVRFVAENPGIWLLHCHIDSHLTWGLAM 357
N DP R+ + GTP G V +RF +NPG W LHCHID HL G A+
Sbjct: 415 NYDDPVWRDVVSTGTPQAGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFAV 464
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 2 RFPSNAKVSDV------TMNCNAETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTV 55
RFP A + + T A+ V G+ R+++ + + + F + +H+LTV
Sbjct: 161 RFPKGADSTLINGLGRSTSTPTADLAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTV 220
Query: 56 VGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQ 87
+ D T+P I I Q + +L A+Q
Sbjct: 221 IEADGVSTQPVTVDSIQIFAAQRYSFVLNANQ 252
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPP 316
+Y L + ++I T+ HP HLHGH F VV S ++ +N +P
Sbjct: 369 SVYSLPANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSA--------GSSTYNYANPV 420
Query: 317 RRNTIGT-PPGGWVAVRFVAENPGIWLLHCHIDSHLTWGLAM 357
R+ + T PG V +RF +NPG W LHCHID HL G A+
Sbjct: 421 YRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 18 AETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQ 77
A+ V G+ R+++ + + + F + H LTV+ D+ KP + I Q
Sbjct: 182 ADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQ 241
Query: 78 TTNVLLTADQ 87
+ +L ADQ
Sbjct: 242 RYSFVLNADQ 251
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPP 316
+Y L + ++I T+ HP HLHGH F VV S ++ +N +P
Sbjct: 369 SVYSLPANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSA--------GSSTYNYANPV 420
Query: 317 RRNTIGT-PPGGWVAVRFVAENPGIWLLHCHIDSHLTWGLAM 357
R+ + T PG V +RF +NPG W LHCHID HL G A+
Sbjct: 421 YRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 18 AETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQ 77
A+ V G+ R+++ + + + F + H LTV+ D+ KP + I Q
Sbjct: 182 ADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQ 241
Query: 78 TTNVLLTADQ 87
+ +L ADQ
Sbjct: 242 RYSFVLNADQ 251
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPP 316
+Y L + ++I T+ HP HLHGH F VV S ++ +N +P
Sbjct: 369 SVYSLPANADIEISLPATAAAPGFPHPFHLHGHTFAVVRSA--------GSSTYNYENPV 420
Query: 317 RRNTIGT-PPGGWVAVRFVAENPGIWLLHCHIDSHLTWGLAM 357
R+ + T PG V +RF +NPG W LHCHID HL G A+
Sbjct: 421 YRDVVSTGSPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAV 462
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 17 NAETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPG 76
NA+ V G+ R+++ + + H F + H LTV+ D+ KP I I
Sbjct: 181 NADLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAA 240
Query: 77 QTTNVLLTADQ 87
Q + +L ADQ
Sbjct: 241 QRYSFVLNADQ 251
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 282 HPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTP-PGGWVAVRFVAENPGI 340
HP HLHGH F VV S ++ +N ++P +R+ + G V +RFV +NPG
Sbjct: 396 HPFHLHGHAFSVV--------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGP 447
Query: 341 WLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQPP 374
W HCHI+ HL GLA+ F E+ + PP
Sbjct: 448 WFFHCHIEFHLMNGLAIVF-AEDMANTVDANNPP 480
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 18 AETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQ 77
AE VE G+ +R+I+ + + F + H+LT++ VD T+P + I GQ
Sbjct: 182 AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241
Query: 78 TTNVLLTADQP 88
+ +L A+QP
Sbjct: 242 RYSFVLDANQP 252
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 282 HPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTP-PGGWVAVRFVAENPGI 340
HP HLHGH F VV S ++ +N ++P +R+ + G V +RFV +NPG
Sbjct: 396 HPFHLHGHAFSVV--------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGP 447
Query: 341 WLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQPP 374
W HCHI+ HL GLA+ F E+ + PP
Sbjct: 448 WFFHCHIEFHLMNGLAIVF-AEDMANTVDANNPP 480
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 18 AETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQ 77
AE VE G+ +R+I+ + + F + H+LT++ VD T+P + I GQ
Sbjct: 182 AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241
Query: 78 TTNVLLTADQP 88
+ +L A+QP
Sbjct: 242 RYSFVLDANQP 252
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPP 316
++ L S ++I F T+ HP HLHGH F VV S ++ +N +P
Sbjct: 370 SVFVLPSNSSIEISFPATANAPGFPHPFHLHGHAFAVVRSA--------GSSVYNYDNPI 421
Query: 317 RRNTIGT-PPGGWVAVRFVAENPGIWLLHCHIDSHLTWGLAM 357
R+ + T PG V +RF NPG W LHCHID HL G A+
Sbjct: 422 FRDVVSTGQPGDNVTIRFETNNPGPWFLHCHIDFHLDAGFAV 463
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 25 VEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLT 84
V G+ R+++ + + H F + NH +T++ D+ T+P I I Q + +L
Sbjct: 190 VTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLD 249
Query: 85 ADQP 88
A QP
Sbjct: 250 ASQP 253
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPP 316
+Y L + ++I F T+ HP HLHGH F VV S + +N +P
Sbjct: 370 SVYSLPSNADIEISFPATAAAPGAPHPFHLHGHAFAVVRSA--------GSTVYNYDNPI 421
Query: 317 RRNTI--GTPPGGW-VAVRFVAENPGIWLLHCHIDSHLTWGLAMAF 359
R+ + GTP G V +RF +NPG W LHCHID HL G A+ F
Sbjct: 422 FRDVVSTGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVF 467
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 18 AETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQ 77
A+ V G+ R+++ + + + F + H +T++ D+ T P I I Q
Sbjct: 183 ADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQ 242
Query: 78 TTNVLLTADQ 87
+ +L A+Q
Sbjct: 243 RYSFVLEANQ 252
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 282 HPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPP-GGWVAVRFVAENPGI 340
HP HLHGH+F V + S + N DP R+ + G V +RF +NPG
Sbjct: 397 HPFHLHGHDFAV--------SESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGP 448
Query: 341 WLLHCHIDSHLTWGLAMAF 359
W LHCHID HL G A+ F
Sbjct: 449 WFLHCHIDWHLDAGFAIVF 467
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 25 VEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPGQTTNVLLT 84
VE G+ +R+++ + + + F + H +T++ D ++ I I Q + +L
Sbjct: 193 VEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLN 252
Query: 85 ADQP 88
A+QP
Sbjct: 253 ANQP 256
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPP 316
+Y L + ++I F T+ HP HLHGH F VV S + +N +P
Sbjct: 370 SVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA--------GSTVYNYDNPI 421
Query: 317 RRNTI--GTPPGGW-VAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQP 373
R+ + GTP G V +RF NPG W LHCHID HL G A+ ++ ++ V P
Sbjct: 422 FRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAV--VMAEDTPDVKAVNP 479
Query: 374 PP 375
P
Sbjct: 480 VP 481
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 2 RFPSNAKVSDVT------MNCNAETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTV 55
RFP A + + + AE V G+ R+++ + N H F + H LT+
Sbjct: 161 RFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI 220
Query: 56 VGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQ 87
+ VD+ ++P I I Q + +L A+Q
Sbjct: 221 IEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQ 252
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPP 316
+Y L + ++I F T+ HP HLHGH F VV S + +N +P
Sbjct: 370 SVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA--------GSTVYNYDNPI 421
Query: 317 RRNTI--GTPPGGW-VAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQP 373
R+ + GTP G V +RF NPG W LHCHID HL G A+ ++ ++ V P
Sbjct: 422 FRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAV--VMAEDTPDVKAVNP 479
Query: 374 PP 375
P
Sbjct: 480 VP 481
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 2 RFPSNAKVSDVT------MNCNAETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTV 55
RFP A + + + AE V G+ R+++ + N H F + H LT+
Sbjct: 161 RFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI 220
Query: 56 VGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQ 87
+ VD+ ++P I I Q + +L A+Q
Sbjct: 221 IEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQ 252
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 265 SRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTI--G 322
+ ++I F T+ HP HLHGH F VV S + +N +P R+ + G
Sbjct: 378 ASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA--------GSTVYNYSNPIFRDVVSTG 429
Query: 323 TPPGGW-VAVRFVAENPGIWLLHCHIDSHLTWGLAM 357
TP G V +RF+ NPG W LHCHID HL G A+
Sbjct: 430 TPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAV 465
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 2 RFPSNAKVSDVT------MNCNAETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTV 55
RFP+ A + + + +AE V G+ R+++ + + F + H LT+
Sbjct: 161 RFPAGADATLINGKGRAPSDTSAELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTI 220
Query: 56 VGVDTSYTKPFPTSVIMIAPGQTTNVLLTADQ 87
+ VD+S ++P I I Q + +L A+Q
Sbjct: 221 IEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQ 252
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 257 KLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPP 316
+ L + ++I F T+ HP HLHGH F VV S + +N +P
Sbjct: 370 SVXTLPSNASIEISFPATAAAPGAPHPFHLHGHVFAVVRSA--------GSTVYNYSNPI 421
Query: 317 RRNTI--GTPPGGW-VAVRFVAENPGIWLLHCHIDSHLTWGLAM 357
R+ + GTP G V +RF+ NPG W LHCHID HL G A+
Sbjct: 422 FRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 254 KRTKLYKLKFGSRVQIVF--QDTSIVSVEDHPMHLHGHEFYVV------GSGLG----NF 301
T + L+ V+IV QDT HP HLHGH F + LG +F
Sbjct: 367 SNTHTFILEKDEIVEIVLNNQDTGT-----HPFHLHGHAFQTIQRDRTYDDALGEVPHSF 421
Query: 302 NPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPGIWLLHCHIDSH 350
+P A P RR+T+ P +RF A+NPG+W HCHI+ H
Sbjct: 422 DPDNHPAFPEY--PMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWH 468
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 17 NAETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSYTKPFPTSVIMIAPG 76
N + + V+ T LLRI+N +F + +H++TVV +D T+ T ++ I
Sbjct: 174 NTMNLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVA 233
Query: 77 QTTNVLL 83
Q VL+
Sbjct: 234 QRYTVLV 240
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 253 RKRTKLYKLKFGSRVQIVFQDTSIV--SVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKF 310
RK L ++ S++ +V +D ++ S DHP H+HG +F ++ S L N A+F
Sbjct: 377 RKSYDLKRIDLSSKLGVV-EDWIVINKSHMDHPFHIHGTQFELISSKL---NGKVQKAEF 432
Query: 311 NLIDPPRRNTIGTPPGGWVAVRFVAENPGIWLLHCHIDSHLTWGL 355
+ R+TI P + +R + G+ + HCHI H G+
Sbjct: 433 RAL----RDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGM 473
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 17/84 (20%)
Query: 278 SVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAEN 337
++ H +H HGH F G+ S+D F++ PG + +
Sbjct: 971 EIDLHTVHFHGHSFQYKHRGV----YSSDV--FDIF-----------PGTYQTLEMFPRT 1013
Query: 338 PGIWLLHCHIDSHLTWGLAMAFLV 361
PGIWLLHCH+ H+ G+ + V
Sbjct: 1014 PGIWLLHCHVTDHIHAGMETTYTV 1037
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 317 RRNTIGTPPGGWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVEN 363
R +TI P VA+NPG W+L C +HL GL F V+
Sbjct: 291 RIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQE 337
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 17/84 (20%)
Query: 278 SVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAEN 337
++ H +H HGH F G+ S+D F++ PG + +
Sbjct: 990 EIDLHTVHFHGHSFQYKHRGV----YSSDV--FDIF-----------PGTYQTLEMFPRT 1032
Query: 338 PGIWLLHCHIDSHLTWGLAMAFLV 361
PGIWLLHCH+ H+ G+ + V
Sbjct: 1033 PGIWLLHCHVTDHIHAGMETTYTV 1056
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 317 RRNTIGTPPGGWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVEN 363
R +TI P VA+NPG W+L C +HL GL F V+
Sbjct: 310 RIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQE 356
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 282 HPMHLHGHEFYVVGSGL--GNFNPSTDTAKFNLIDPPRRNTIGTPPG---GWVAVRFVAE 336
H HLHGH + +G+ ++PS LID N PG G+ +
Sbjct: 212 HTFHLHGHRWLDNRTGMRTSEYDPSP------LIDIKDLN-----PGVSFGFQVIAGEGV 260
Query: 337 NPGIWLLHCHIDSHLTWGLAMAFLVENGVGKL 368
PG+W+ HCH+ +H G+A FLV N G +
Sbjct: 261 GPGMWMYHCHVQNHSDMGMAGMFLVRNADGTM 292
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 259 YKLKFGSRVQIVFQDTSIVSVED-HPMHLHGHEFYVVGSGL--GNFNPSTDTAKFNLIDP 315
++ G RV+IV I E H H+HGH + +G+ G +PS +ID
Sbjct: 211 FEATVGDRVEIVM----ITHGEYYHTFHMHGHRWADNRTGILTGPDDPS------RVID- 259
Query: 316 PRRNTIGTPPG--GWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQP 373
N I P G+ + G W+ HCH+ SH G+ FLV+ G + +P
Sbjct: 260 ---NKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYEP 316
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 259 YKLKFGSRVQIVFQDTSIVSVED-HPMHLHGHEFYVVGSGL--GNFNPSTDTAKFNLIDP 315
++ G RV+IV I E H H+HGH + +G+ G +PS +ID
Sbjct: 174 FEATVGDRVEIVM----ITHGEYYHTFHMHGHRWADNRTGILTGPDDPS------RVID- 222
Query: 316 PRRNTIGTPPG--GWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQP 373
N I P G+ + G W+ HCH+ SH G+ FLV+ G + +P
Sbjct: 223 ---NKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYEP 279
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 259 YKLKFGSRVQIVFQDTSIVSVED-HPMHLHGHEFYVVGSGL--GNFNPSTDTAKFNLIDP 315
++ G RV+IV I E H H+HGH + +G+ G +PS +ID
Sbjct: 173 FEATVGDRVEIVM----ITHGEYYHTFHMHGHRWADNRTGILTGPDDPS------RVID- 221
Query: 316 PRRNTIGTPPG--GWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQP 373
N I P G+ + G W+ HCH+ SH G+ FLV+ G + +P
Sbjct: 222 ---NKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYEP 278
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 259 YKLKFGSRVQIVFQDTSIVSVED-HPMHLHGHEFYVVGSGL--GNFNPSTDTAKFNLIDP 315
++ G RV+IV I E H H+HGH + +G+ G +PS +ID
Sbjct: 170 FEATVGDRVEIVM----ITHGEYYHTFHMHGHRWADNRTGILTGPDDPS------RVID- 218
Query: 316 PRRNTIGTPPG--GWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQP 373
N I P G+ + G W+ HCH+ SH G+ FLV+ G + +P
Sbjct: 219 ---NKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYEP 275
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 234 VPPIIFDYTGNVSRGLWQPRKRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYV 293
+P +FDY ++ T+ ++K G +++ ++ DH +H H
Sbjct: 159 IPGDVFDYYTINAKSF----PETQPIRVKKGDVIRL-----RLIGAGDHVHAIHTH---- 205
Query: 294 VGSGLGNFNPSTDTAKFNLIDPPRRNTIGTPPGGWVAVRFVAENPGIWLLHCHIDSHLTW 353
G+ + F L P + +T+ PG V +NPG+W++H H+D+H T
Sbjct: 206 -----GHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTN 260
Query: 354 G 354
G
Sbjct: 261 G 261
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 13 TMNCNA--ETVRFPVEAGETILLRIINSAMNQEHFFGVANH-KLTVVGVDTSY--TKPFP 67
T+N + ET V+ G+ I LR+I + +H + H ++ + + KP
Sbjct: 168 TINAKSFPETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGFPLDKPIK 224
Query: 68 TSVIMIAPGQTTNVLLTADQP 88
++I PG+ +V+L D P
Sbjct: 225 GDTVLIGPGERYDVILNMDNP 245
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 19/120 (15%)
Query: 259 YKLKFGSRVQIVFQDTSIVSVED-HPMHLHGHEFYVVGSGL--GNFNPSTDTAKFNLIDP 315
++ G RV+ V I E H HLHGH + +G+ G +PS +ID
Sbjct: 176 FEATVGDRVEFVM----ITHGEYYHTFHLHGHRWADNRTGMLTGPDDPS------QVID- 224
Query: 316 PRRNTIGTPPG--GWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLVENGVGKLQTVQP 373
N I P G+ + G W+ HCH+ SH G+ FLV+ G + P
Sbjct: 225 ---NKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYDP 281
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 6 NAKVSDVTMNCNAETVRFPVEAGETILLRIINSAMNQEHFFGVANHKLTVVGVDTSY-TK 64
N K D+ + N V T+ LR++N++ + + + +H L ++ D + +
Sbjct: 173 NGKEGDLVL-VNGALRPTLVAQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEE 231
Query: 65 PFPTSVIMIAPGQTTNVLL 83
P S +++APG+ VL+
Sbjct: 232 PLEVSELLLAPGERAEVLV 250
>pdb|2R7E|B Chain B, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 770
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 29/108 (26%)
Query: 254 KRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLI 313
+R + Y L GS I H +H GH F V A +NL
Sbjct: 376 QRIRWYLLSMGSNENI------------HSIHFSGHVFTVRK------KEEYKMALYNLY 417
Query: 314 DPPRRNTIGTPPGGWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLV 361
PG + V + GIW + C I HL G++ FLV
Sbjct: 418 -----------PGVFETVEMLPSKAGIWRVECLIGEHLHAGMSTLFLV 454
>pdb|3CDZ|B Chain B, Crystal Structure Of Human Factor Viii
Length = 684
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 29/108 (26%)
Query: 254 KRTKLYKLKFGSRVQIVFQDTSIVSVEDHPMHLHGHEFYVVGSGLGNFNPSTDTAKFNLI 313
+R + Y L GS I H +H GH F V A +NL
Sbjct: 290 QRIRWYLLSMGSNENI------------HSIHFSGHVFTVRK------KEEYKMALYNLY 331
Query: 314 DPPRRNTIGTPPGGWVAVRFVAENPGIWLLHCHIDSHLTWGLAMAFLV 361
PG + V + GIW + C I HL G++ FLV
Sbjct: 332 -----------PGVFETVEMLPSKAGIWRVECLIGEHLHAGMSTLFLV 368
>pdb|2DV6|A Chain A, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|B Chain B, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|C Chain C, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|D Chain D, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|E Chain E, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|F Chain F, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
Length = 447
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 323 TPPGGWVAVRFVAENPGIWLLHC---HIDSHLTWGLAMAFLVE 362
T PG V F A PGI++ HC + +H+T G+ LVE
Sbjct: 238 TDPGEETVVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVE 280
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 282 HPMHLHGHEFYVVGSGLGNFNPST----DTAKFNLIDPPRRNTIGTPPGGWVAVRFVAEN 337
HP+H+H +F V+ GN N T ++ +++ RR T+ V A
Sbjct: 398 HPIHIHLVDFKVISRTSGN-NARTVMPYESGLKDVVWLGRRETV-------VVEAHYAPF 449
Query: 338 PGIWLLHCHIDSHLTWGLAMAF 359
PG+++ HCH H + AF
Sbjct: 450 PGVYMFHCHNLIHEDHDMMAAF 471
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 323 TPPGGWVAVRFVAENPGIWLLHCH---IDSHLTWGLAMAFLVE 362
T PG F A NPG+++ HC + H+ G+ LVE
Sbjct: 103 TAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVE 145
>pdb|1KCB|A Chain A, Crystal Structure Of A No-Forming Nitrite Reductase
Mutant: An Analog Of A Transition State In Enzymatic
Reaction
Length = 340
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 325 PGGWVAVRFVAENPGIWLLHCHIDS----HLTWGLAMAFLV 361
PG +RF A PG+++ HC + H+T G+ A +V
Sbjct: 116 PGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|1NIB|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|B Chain B, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|C Chain C, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|A Chain A, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|B Chain B, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|C Chain C, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2BW4|A Chain A, Atomic Resolution Structure Of Resting State Of The
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|2BW5|A Chain A, Atomic Resolution Structure Of No-Bound Achromobacter
Cycloclastes Cu Nitrite Reductase
pdb|2BWD|A Chain A, Atomic Resolution Structure Of Achromobacter Cycloclastes
Cu Nitrite Reductase With Endogenously Bound Nitrite And
No
pdb|2BWI|A Chain A, Atomic Resolution Structure Of Nitrite -Soaked
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|1NIC|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NID|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIE|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIF|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2NRD|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2Y1A|A Chain A, Crystal Structure Of Achromobacter Cycloclastes Cu Nitrite
Reductase With Bound No
Length = 340
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 325 PGGWVAVRFVAENPGIWLLHCHIDS----HLTWGLAMAFLV 361
PG +RF A PG+++ HC + H+T G+ A +V
Sbjct: 116 PGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|2AVF|A Chain A, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|B Chain B, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|C Chain C, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|D Chain D, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|E Chain E, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|F Chain F, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
Length = 329
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 325 PGGWVAVRFVAENPGIWLLHCHIDS----HLTWGLAMAFLV 361
PG +RF A PG+++ HC + H+T G+ A +V
Sbjct: 116 PGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|1RZP|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZQ|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
Length = 335
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 325 PGGWVAVRFVAENPGIWLLHCHIDS----HLTWGLAMAFLV 361
PG +RF A PG+++ HC + H+T G+ A +V
Sbjct: 116 PGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,086,030
Number of Sequences: 62578
Number of extensions: 440350
Number of successful extensions: 1136
Number of sequences better than 100.0: 75
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1033
Number of HSP's gapped (non-prelim): 108
length of query: 381
length of database: 14,973,337
effective HSP length: 101
effective length of query: 280
effective length of database: 8,652,959
effective search space: 2422828520
effective search space used: 2422828520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)