Query 016877
Match_columns 381
No_of_seqs 238 out of 2471
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 05:16:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 3.8E-47 1.3E-51 347.9 31.5 278 24-381 15-296 (308)
2 3ii7_A Kelch-like protein 7; p 100.0 1.8E-45 6.1E-50 336.4 31.9 256 91-381 25-281 (306)
3 2xn4_A Kelch-like protein 2; s 100.0 3.4E-45 1.2E-49 333.9 32.4 252 91-379 31-283 (302)
4 2vpj_A Kelch-like protein 12; 100.0 5.9E-45 2E-49 332.1 31.8 252 91-381 32-287 (301)
5 4asc_A Kelch repeat and BTB do 100.0 2.8E-43 9.7E-48 323.2 29.4 260 91-379 14-284 (315)
6 2uvk_A YJHT; unknown function, 100.0 4.5E-43 1.5E-47 327.4 28.8 297 26-380 12-350 (357)
7 2woz_A Kelch repeat and BTB do 100.0 1.4E-42 4.7E-47 319.0 24.9 286 32-347 14-314 (318)
8 2woz_A Kelch repeat and BTB do 100.0 6.3E-41 2.2E-45 308.0 28.3 259 91-378 25-293 (318)
9 2xn4_A Kelch-like protein 2; s 100.0 3.8E-40 1.3E-44 300.5 30.0 285 28-343 10-302 (302)
10 4asc_A Kelch repeat and BTB do 100.0 2.6E-41 8.8E-46 310.2 21.9 289 32-350 3-307 (315)
11 1zgk_A Kelch-like ECH-associat 100.0 8.1E-40 2.8E-44 299.3 27.5 242 26-334 63-305 (308)
12 3ii7_A Kelch-like protein 7; p 100.0 8.4E-40 2.9E-44 298.8 27.5 274 33-335 11-291 (306)
13 2vpj_A Kelch-like protein 12; 100.0 4.5E-39 1.5E-43 293.2 25.8 239 25-334 54-296 (301)
14 2uvk_A YJHT; unknown function, 100.0 3.6E-38 1.2E-42 294.2 25.7 255 104-381 2-303 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 5.1E-36 1.7E-40 302.0 25.5 274 26-372 390-694 (695)
16 1k3i_A Galactose oxidase precu 100.0 2.3E-34 7.7E-39 289.3 22.0 324 27-371 189-548 (656)
17 2zwa_A Leucine carboxyl methyl 100.0 3.7E-34 1.3E-38 288.4 23.5 242 101-378 378-641 (695)
18 1k3i_A Galactose oxidase precu 100.0 1.4E-32 4.7E-37 276.4 16.1 303 51-381 168-506 (656)
19 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.013 4.3E-07 53.7 27.5 263 28-374 48-339 (376)
20 3dsm_A Uncharacterized protein 97.7 0.0032 1.1E-07 56.8 19.5 185 27-228 47-243 (328)
21 3dsm_A Uncharacterized protein 97.5 0.047 1.6E-06 49.0 26.8 267 48-372 16-302 (328)
22 3mbr_X Glutamine cyclotransfer 97.5 0.023 7.8E-07 48.7 20.0 109 105-229 12-122 (243)
23 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.026 8.9E-07 52.8 22.0 263 33-375 128-394 (445)
24 3mbr_X Glutamine cyclotransfer 97.4 0.015 5.1E-07 49.8 17.1 109 155-283 14-122 (243)
25 3jrp_A Fusion protein of prote 97.3 0.0098 3.4E-07 53.8 17.1 171 91-286 34-231 (379)
26 1l0q_A Surface layer protein; 97.3 0.0022 7.4E-08 58.9 12.4 166 34-230 2-178 (391)
27 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.048 1.6E-06 51.0 21.4 211 34-286 169-382 (445)
28 3nol_A Glutamine cyclotransfer 97.2 0.02 7E-07 49.5 16.5 180 27-229 46-244 (262)
29 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.13 4.5E-06 46.7 24.4 213 90-377 63-303 (376)
30 1p22_A F-BOX/WD-repeat protein 97.0 0.062 2.1E-06 50.1 18.7 213 33-287 142-357 (435)
31 1ri6_A Putative isomerase YBHE 96.9 0.039 1.3E-06 49.1 16.6 98 91-204 61-166 (343)
32 3ow8_A WD repeat-containing pr 96.9 0.1 3.4E-06 46.6 19.3 132 90-244 102-235 (321)
33 3v7d_B Cell division control p 96.9 0.23 7.8E-06 46.4 22.3 266 32-375 130-424 (464)
34 3nol_A Glutamine cyclotransfer 96.8 0.014 4.9E-07 50.4 12.1 111 153-283 34-144 (262)
35 3bws_A Protein LP49; two-domai 96.8 0.11 3.8E-06 48.0 19.4 152 33-203 133-296 (433)
36 3jro_A Fusion protein of prote 96.7 0.022 7.6E-07 57.6 14.7 95 91-200 32-133 (753)
37 1k8k_C P40, ARP2/3 complex 41 96.7 0.065 2.2E-06 48.2 16.3 128 90-232 30-164 (372)
38 3odt_A Protein DOA1; ubiquitin 96.7 0.16 5.3E-06 44.3 18.1 27 29-60 24-50 (313)
39 3v7d_B Cell division control p 96.7 0.3 1E-05 45.5 21.1 133 119-283 277-410 (464)
40 3nok_A Glutaminyl cyclase; bet 96.5 0.05 1.7E-06 47.1 13.3 148 27-201 58-212 (268)
41 2iwa_A Glutamine cyclotransfer 96.5 0.07 2.4E-06 46.4 14.2 168 151-374 10-183 (266)
42 1k8k_C P40, ARP2/3 complex 41 96.4 0.081 2.8E-06 47.6 15.1 104 121-244 19-125 (372)
43 2iwa_A Glutamine cyclotransfer 96.4 0.11 3.6E-06 45.3 14.6 152 27-201 24-183 (266)
44 4aez_A CDC20, WD repeat-contai 96.4 0.25 8.4E-06 45.3 18.2 92 90-201 156-250 (401)
45 1got_B GT-beta; complex (GTP-b 96.3 0.47 1.6E-05 42.3 19.3 100 121-244 154-255 (340)
46 4aow_A Guanine nucleotide-bind 96.3 0.059 2E-06 47.8 13.1 22 34-60 51-72 (340)
47 2pm7_B Protein transport prote 96.3 0.35 1.2E-05 42.3 18.0 64 122-200 67-133 (297)
48 3hfq_A Uncharacterized protein 96.2 0.091 3.1E-06 47.1 14.1 101 90-204 63-177 (347)
49 4ery_A WD repeat-containing pr 96.2 0.27 9.3E-06 43.1 16.8 99 121-243 76-177 (312)
50 3jrp_A Fusion protein of prote 96.2 0.085 2.9E-06 47.5 13.8 96 121-231 22-124 (379)
51 1r5m_A SIR4-interacting protei 96.2 0.23 7.9E-06 45.3 16.8 63 122-201 217-280 (425)
52 3fm0_A Protein CIAO1; WDR39,SG 96.0 0.12 4.2E-06 46.5 14.0 184 121-351 27-216 (345)
53 2ojh_A Uncharacterized protein 96.0 0.16 5.4E-06 43.6 14.2 240 87-378 19-264 (297)
54 3bg1_A Protein SEC13 homolog; 96.0 0.17 5.8E-06 44.8 14.4 69 122-205 71-143 (316)
55 2hes_X YDR267CP; beta-propelle 95.9 0.82 2.8E-05 40.6 20.9 197 121-372 118-328 (330)
56 4ery_A WD repeat-containing pr 95.8 0.84 2.9E-05 39.8 21.3 143 33-202 34-183 (312)
57 3bws_A Protein LP49; two-domai 95.8 0.24 8.1E-06 45.7 15.3 98 90-204 144-248 (433)
58 3dwl_C Actin-related protein 2 95.8 0.08 2.7E-06 47.9 11.7 134 91-244 34-175 (377)
59 2hqs_A Protein TOLB; TOLB, PAL 95.7 0.5 1.7E-05 43.8 17.0 228 90-379 159-394 (415)
60 1p22_A F-BOX/WD-repeat protein 95.7 0.23 7.8E-06 46.1 14.5 104 116-244 137-240 (435)
61 2ojh_A Uncharacterized protein 95.6 0.18 6.3E-06 43.2 12.7 106 90-208 62-171 (297)
62 2pm9_A Protein WEB1, protein t 95.6 1.3 4.5E-05 40.1 20.4 106 122-244 126-247 (416)
63 3nok_A Glutaminyl cyclase; bet 95.5 0.33 1.1E-05 42.0 13.7 154 162-374 55-212 (268)
64 3azo_A Aminopeptidase; POP fam 95.5 1.7 5.8E-05 42.6 21.0 241 90-378 102-375 (662)
65 3vgz_A Uncharacterized protein 95.5 1.2 4.2E-05 39.3 21.2 99 89-202 68-176 (353)
66 1gxr_A ESG1, transducin-like e 95.5 0.23 8E-06 43.6 13.2 95 121-231 108-204 (337)
67 2qc5_A Streptogramin B lactona 95.4 1.1 3.9E-05 38.4 24.6 167 33-228 30-205 (300)
68 3vl1_A 26S proteasome regulato 95.4 0.75 2.6E-05 42.0 16.9 92 90-201 119-214 (420)
69 1gxr_A ESG1, transducin-like e 95.4 1.3 4.4E-05 38.7 18.2 123 90-231 119-245 (337)
70 1got_B GT-beta; complex (GTP-b 95.3 1 3.5E-05 40.1 17.1 102 121-244 108-213 (340)
71 3jro_A Fusion protein of prote 95.3 0.12 4E-06 52.2 11.8 97 121-232 20-123 (753)
72 2z3z_A Dipeptidyl aminopeptida 95.3 1.9 6.4E-05 42.7 20.5 64 138-205 235-300 (706)
73 3dwl_C Actin-related protein 2 95.2 0.034 1.2E-06 50.5 7.0 96 121-231 22-121 (377)
74 1l0q_A Surface layer protein; 95.2 0.088 3E-06 47.9 9.8 119 90-230 12-136 (391)
75 1rwi_B Serine/threonine-protei 95.2 1.3 4.3E-05 37.6 18.2 170 33-229 34-210 (270)
76 2z2n_A Virginiamycin B lyase; 95.1 1.4 4.7E-05 37.8 25.1 167 33-228 25-200 (299)
77 1vyh_C Platelet-activating fac 95.1 0.7 2.4E-05 42.5 15.8 144 33-202 119-268 (410)
78 2hqs_A Protein TOLB; TOLB, PAL 94.9 0.88 3E-05 42.0 15.9 99 90-205 203-306 (415)
79 2ynn_A Coatomer subunit beta'; 94.9 1.4 4.9E-05 38.4 16.6 143 33-200 24-173 (304)
80 3mkq_A Coatomer beta'-subunit; 94.9 1.4 4.6E-05 44.4 18.4 172 33-231 24-207 (814)
81 1rwi_B Serine/threonine-protei 94.9 1.5 5.3E-05 37.0 20.9 120 90-229 46-168 (270)
82 4g56_B MGC81050 protein; prote 94.9 0.72 2.5E-05 41.6 14.8 102 121-244 150-256 (357)
83 3hfq_A Uncharacterized protein 94.9 0.25 8.7E-06 44.1 11.7 61 139-207 19-80 (347)
84 2pbi_B Guanine nucleotide-bind 94.8 1.4 4.7E-05 39.6 16.6 100 121-244 165-269 (354)
85 3v9f_A Two-component system se 94.8 0.9 3.1E-05 45.9 16.7 57 139-206 428-485 (781)
86 3f3f_A Nucleoporin SEH1; struc 94.8 0.98 3.4E-05 39.4 15.2 29 340-380 317-346 (351)
87 4a2l_A BT_4663, two-component 94.7 2 6.8E-05 43.4 19.2 59 139-207 428-488 (795)
88 3ow8_A WD repeat-containing pr 94.7 2.1 7.1E-05 37.8 17.6 100 121-244 175-277 (321)
89 3ei3_B DNA damage-binding prot 94.7 2 7E-05 38.5 17.6 141 35-199 87-236 (383)
90 2pm9_A Protein WEB1, protein t 94.7 1.9 6.6E-05 39.0 17.5 98 122-231 178-284 (416)
91 1pgu_A Actin interacting prote 94.7 1.1 3.6E-05 43.2 16.4 58 172-243 456-516 (615)
92 3v9f_A Two-component system se 94.6 1.5 5E-05 44.3 17.8 161 90-282 427-600 (781)
93 3u4y_A Uncharacterized protein 94.6 0.49 1.7E-05 41.7 12.9 122 90-229 20-147 (331)
94 3vl1_A 26S proteasome regulato 94.6 2.6 8.9E-05 38.3 22.9 104 33-150 108-215 (420)
95 2hes_X YDR267CP; beta-propelle 94.5 1.7 5.9E-05 38.4 16.4 104 121-244 69-182 (330)
96 3vgz_A Uncharacterized protein 94.4 2.4 8.3E-05 37.3 21.9 152 34-202 53-218 (353)
97 3i2n_A WD repeat-containing pr 94.4 1.5 5.1E-05 38.7 15.7 103 121-244 128-241 (357)
98 3no2_A Uncharacterized protein 94.4 1.3 4.6E-05 38.3 14.8 88 121-229 4-95 (276)
99 3zwl_B Eukaryotic translation 94.3 1.1 3.9E-05 39.6 14.8 23 33-60 43-65 (369)
100 2xbg_A YCF48-like protein; pho 94.3 2.7 9.4E-05 37.3 22.1 203 92-348 58-268 (327)
101 3u4y_A Uncharacterized protein 94.2 2.6 9E-05 36.8 16.7 128 33-179 9-147 (331)
102 4a11_B DNA excision repair pro 94.1 0.7 2.4E-05 41.7 13.1 92 90-200 122-219 (408)
103 1sq9_A Antiviral protein SKI8; 94.1 2.1 7.3E-05 38.5 16.4 21 35-60 27-47 (397)
104 2xbg_A YCF48-like protein; pho 94.1 2.9 0.0001 37.1 20.0 198 92-347 17-222 (327)
105 1nir_A Nitrite reductase; hemo 94.1 0.84 2.9E-05 44.0 14.0 100 33-150 148-260 (543)
106 3sfz_A APAF-1, apoptotic pepti 93.9 0.78 2.7E-05 48.8 14.6 92 121-231 972-1064(1249)
107 4aez_A CDC20, WD repeat-contai 93.8 2.7 9.2E-05 38.2 16.3 133 89-244 112-246 (401)
108 4e54_B DNA damage-binding prot 93.7 0.92 3.1E-05 42.0 13.2 144 33-200 131-283 (435)
109 1pgu_A Actin interacting prote 93.6 3.5 0.00012 39.5 17.7 101 121-243 127-235 (615)
110 3fm0_A Protein CIAO1; WDR39,SG 93.6 0.36 1.2E-05 43.3 9.9 96 171-286 27-127 (345)
111 2aq5_A Coronin-1A; WD40 repeat 93.6 1.4 4.6E-05 40.2 14.0 96 121-231 93-197 (402)
112 3iz6_a 40S ribosomal protein R 93.6 4 0.00014 36.8 20.0 101 123-244 171-278 (380)
113 1qhu_A Protein (hemopexin); be 93.5 3 0.0001 39.1 16.0 59 121-200 158-216 (460)
114 3dm0_A Maltose-binding peripla 93.5 3.8 0.00013 40.4 17.9 104 121-244 483-590 (694)
115 3b7f_A Glycosyl hydrolase, BNR 93.3 4.6 0.00016 36.8 19.7 103 92-206 33-154 (394)
116 3scy_A Hypothetical bacterial 93.3 4.2 0.00014 36.2 16.6 100 91-200 30-130 (361)
117 3mkq_A Coatomer beta'-subunit; 93.3 1.2 4E-05 44.8 14.1 123 91-232 36-163 (814)
118 3zwl_B Eukaryotic translation 93.3 0.83 2.9E-05 40.5 11.8 105 121-244 43-149 (369)
119 3k26_A Polycomb protein EED; W 93.2 4.1 0.00014 35.8 19.5 94 90-200 95-193 (366)
120 1sq9_A Antiviral protein SKI8; 93.2 2.1 7E-05 38.6 14.5 108 118-245 22-156 (397)
121 2pbi_B Guanine nucleotide-bind 93.2 3.8 0.00013 36.6 16.0 51 91-147 87-137 (354)
122 3scy_A Hypothetical bacterial 93.0 4.6 0.00016 35.9 17.9 51 92-148 79-130 (361)
123 3pe7_A Oligogalacturonate lyas 93.0 2.8 9.5E-05 37.6 15.0 65 138-207 168-233 (388)
124 2ynn_A Coatomer subunit beta'; 92.7 1.6 5.6E-05 38.0 12.6 62 121-200 66-129 (304)
125 3ju4_A Endo-N-acetylneuraminid 92.6 5.9 0.0002 36.1 19.6 185 100-287 270-484 (670)
126 1pby_B Quinohemoprotein amine 92.6 2.7 9.2E-05 36.6 14.0 137 50-203 12-167 (337)
127 3bg1_A Protein SEC13 homolog; 92.5 0.85 2.9E-05 40.2 10.5 104 121-244 24-134 (316)
128 3g4e_A Regucalcin; six bladed 92.4 2.8 9.7E-05 36.4 13.7 214 33-285 24-263 (297)
129 2aq5_A Coronin-1A; WD40 repeat 92.4 5.9 0.0002 35.8 16.5 91 123-228 145-238 (402)
130 3mmy_A MRNA export factor; mRN 92.3 1.7 5.9E-05 38.3 12.4 88 121-228 97-187 (368)
131 3mmy_A MRNA export factor; mRN 92.1 3.7 0.00013 36.1 14.4 89 90-200 108-200 (368)
132 1vyh_C Platelet-activating fac 92.1 2.6 9E-05 38.6 13.6 64 121-201 161-225 (410)
133 4gga_A P55CDC, cell division c 91.8 2.9 9.8E-05 38.3 13.7 90 50-148 126-219 (420)
134 1yfq_A Cell cycle arrest prote 91.7 6.2 0.00021 34.3 20.7 125 89-231 78-215 (342)
135 3lrv_A PRE-mRNA-splicing facto 91.7 6.6 0.00023 34.6 22.0 65 121-201 138-203 (343)
136 1yfq_A Cell cycle arrest prote 91.6 3 0.0001 36.5 13.1 93 121-231 22-121 (342)
137 4gqb_B Methylosome protein 50; 91.6 1.7 5.9E-05 38.9 11.5 67 121-201 92-160 (344)
138 4e54_B DNA damage-binding prot 91.5 0.9 3.1E-05 42.1 9.8 103 121-243 131-237 (435)
139 3k26_A Polycomb protein EED; W 91.5 0.94 3.2E-05 40.1 9.6 92 122-231 85-182 (366)
140 4g56_B MGC81050 protein; prote 90.8 6.7 0.00023 35.0 14.7 109 121-243 53-167 (357)
141 2xzm_R RACK1; ribosome, transl 90.7 8.2 0.00028 34.0 15.1 21 33-58 38-58 (343)
142 1r5m_A SIR4-interacting protei 90.6 9.2 0.00031 34.3 16.5 65 121-203 119-184 (425)
143 2pm7_B Protein transport prote 90.3 8.1 0.00028 33.3 19.0 53 90-148 77-133 (297)
144 1q7f_A NHL, brain tumor CG1071 90.3 7.7 0.00027 33.0 17.9 95 121-229 40-139 (286)
145 1pjx_A Dfpase, DIISOPROPYLFLUO 89.9 4.7 0.00016 34.8 12.7 98 121-229 28-135 (314)
146 1kb0_A Quinohemoprotein alcoho 89.8 16 0.00056 36.0 22.0 98 116-229 72-182 (677)
147 3ei3_B DNA damage-binding prot 89.6 7.6 0.00026 34.7 14.1 94 123-231 87-184 (383)
148 2ecf_A Dipeptidyl peptidase IV 89.5 16 0.00056 36.0 17.6 62 139-205 264-327 (741)
149 3sfz_A APAF-1, apoptotic pepti 89.4 4.6 0.00016 42.8 14.2 100 121-243 1014-1113(1249)
150 2bkl_A Prolyl endopeptidase; m 89.3 9.1 0.00031 37.8 15.4 181 91-285 148-339 (695)
151 3iuj_A Prolyl endopeptidase; h 89.2 16 0.00053 36.2 17.1 174 91-282 156-344 (693)
152 3i2n_A WD repeat-containing pr 89.2 4.1 0.00014 35.7 11.8 53 91-149 45-101 (357)
153 1w6s_A Methanol dehydrogenase 89.2 17 0.00059 35.3 18.1 64 139-205 132-199 (599)
154 4a11_B DNA excision repair pro 89.0 1.6 5.5E-05 39.3 9.1 70 121-204 55-136 (408)
155 2z2n_A Virginiamycin B lyase; 88.9 10 0.00034 32.2 21.1 119 90-228 36-158 (299)
156 1nir_A Nitrite reductase; hemo 88.5 11 0.00036 36.2 14.9 92 90-202 159-260 (543)
157 2xdw_A Prolyl endopeptidase; a 88.5 20 0.0007 35.3 17.7 180 91-285 152-356 (710)
158 2ad6_A Methanol dehydrogenase 88.4 19 0.00063 34.8 20.2 99 116-229 57-168 (571)
159 2vdu_B TRNA (guanine-N(7)-)-me 88.1 16 0.00054 33.6 19.3 63 122-202 210-274 (450)
160 3b7f_A Glycosyl hydrolase, BNR 88.0 15 0.00052 33.2 18.6 61 140-207 33-98 (394)
161 3c5m_A Oligogalacturonate lyas 87.2 6.8 0.00023 35.0 12.1 127 91-229 169-301 (396)
162 3frx_A Guanine nucleotide-bind 87.1 14 0.00049 32.0 15.6 129 90-244 87-225 (319)
163 2dg1_A DRP35, lactonase; beta 87.0 12 0.00041 32.6 13.4 95 121-228 55-152 (333)
164 3iz6_a 40S ribosomal protein R 86.9 17 0.00057 32.6 15.1 49 191-244 181-235 (380)
165 1w6s_A Methanol dehydrogenase 86.7 24 0.00083 34.3 17.4 98 116-228 57-173 (599)
166 1jmx_B Amine dehydrogenase; ox 86.7 14 0.00048 32.1 13.7 151 32-202 9-178 (349)
167 2ecf_A Dipeptidyl peptidase IV 86.6 13 0.00045 36.7 14.8 68 121-207 119-189 (741)
168 2ymu_A WD-40 repeat protein; u 86.2 14 0.00047 35.1 14.3 91 121-231 396-488 (577)
169 1erj_A Transcriptional repress 86.2 5.5 0.00019 36.0 10.9 99 121-243 134-235 (393)
170 4gqb_B Methylosome protein 50; 86.1 13 0.00043 33.1 13.1 182 33-244 138-329 (344)
171 2vdu_B TRNA (guanine-N(7)-)-me 86.1 21 0.0007 32.8 18.4 63 310-377 334-398 (450)
172 2dg1_A DRP35, lactonase; beta 85.9 10 0.00035 33.0 12.3 149 33-199 55-213 (333)
173 3pe7_A Oligogalacturonate lyas 85.6 14 0.00049 32.7 13.4 62 91-158 61-122 (388)
174 2bkl_A Prolyl endopeptidase; m 85.4 30 0.001 34.0 18.0 237 91-372 95-351 (695)
175 4ggc_A P55CDC, cell division c 84.7 18 0.00061 30.8 15.1 11 50-60 46-56 (318)
176 1qhu_A Protein (hemopexin); be 84.4 18 0.00062 33.8 13.4 48 171-231 158-207 (460)
177 3odt_A Protein DOA1; ubiquitin 84.3 18 0.00062 30.6 15.3 21 121-147 70-90 (313)
178 4gga_A P55CDC, cell division c 84.1 24 0.00082 31.9 17.6 94 89-200 124-219 (420)
179 1kv9_A Type II quinohemoprotei 84.1 18 0.00063 35.6 14.2 78 117-204 113-194 (668)
180 4aow_A Guanine nucleotide-bind 83.8 17 0.00056 31.4 12.7 69 122-205 51-123 (340)
181 4a2l_A BT_4663, two-component 83.7 38 0.0013 33.9 26.3 147 33-206 141-298 (795)
182 3no2_A Uncharacterized protein 83.7 20 0.00068 30.6 20.9 169 34-230 5-184 (276)
183 1nr0_A Actin interacting prote 83.3 34 0.0012 33.0 19.8 23 33-60 250-272 (611)
184 3c5m_A Oligogalacturonate lyas 82.9 25 0.00084 31.1 16.9 59 91-155 61-119 (396)
185 1itv_A MMP9; adaptive molecula 82.9 8.8 0.0003 31.3 9.5 52 166-229 11-72 (195)
186 1pex_A Collagenase-3, MMP-13; 82.7 19 0.00064 29.6 12.7 53 166-230 28-88 (207)
187 2qc5_A Streptogramin B lactona 82.3 22 0.00074 30.0 22.2 118 90-228 41-163 (300)
188 1ri6_A Putative isomerase YBHE 82.0 24 0.00081 30.4 18.6 63 122-198 141-208 (343)
189 2ymu_A WD-40 repeat protein; u 82.0 33 0.0011 32.3 15.0 62 121-200 355-417 (577)
190 1qks_A Cytochrome CD1 nitrite 82.0 38 0.0013 32.6 15.2 94 89-201 176-277 (567)
191 2ad6_A Methanol dehydrogenase 81.3 40 0.0014 32.4 20.2 79 117-205 111-193 (571)
192 1kb0_A Quinohemoprotein alcoho 81.1 44 0.0015 32.9 21.4 79 117-205 124-207 (677)
193 1erj_A Transcriptional repress 81.0 14 0.00049 33.2 11.4 93 90-202 145-241 (393)
194 1yiq_A Quinohemoprotein alcoho 80.5 47 0.0016 32.8 19.7 96 117-228 66-174 (689)
195 3azo_A Aminopeptidase; POP fam 80.1 44 0.0015 32.3 16.7 129 91-229 162-312 (662)
196 2xzm_R RACK1; ribosome, transl 80.1 30 0.001 30.2 13.2 59 171-244 87-147 (343)
197 2xdw_A Prolyl endopeptidase; a 79.6 49 0.0017 32.5 19.1 86 137-230 258-355 (710)
198 2p4o_A Hypothetical protein; p 79.4 30 0.001 29.8 17.8 152 27-199 35-198 (306)
199 3dm0_A Maltose-binding peripla 79.0 21 0.00073 35.0 12.7 23 171-201 441-463 (694)
200 1n7d_A LDL receptor, low-densi 78.2 56 0.0019 32.3 17.8 113 92-228 388-514 (699)
201 1npe_A Nidogen, entactin; glyc 78.0 29 0.001 29.0 18.1 176 27-228 39-225 (267)
202 2z3z_A Dipeptidyl aminopeptida 77.0 57 0.0019 31.8 15.4 111 90-207 235-352 (706)
203 2xyi_A Probable histone-bindin 76.6 13 0.00043 34.1 9.7 20 122-147 141-160 (430)
204 2ghs_A AGR_C_1268P; regucalcin 76.1 39 0.0013 29.4 13.5 66 122-207 61-126 (326)
205 3o4h_A Acylamino-acid-releasin 76.1 30 0.001 32.9 12.6 98 93-205 135-233 (582)
206 1qks_A Cytochrome CD1 nitrite 75.8 58 0.002 31.3 17.8 178 26-228 199-407 (567)
207 3g4e_A Regucalcin; six bladed 75.4 38 0.0013 28.9 14.6 99 90-199 35-139 (297)
208 1q7f_A NHL, brain tumor CG1071 75.2 36 0.0012 28.6 17.8 179 27-228 80-268 (286)
209 2fp8_A Strictosidine synthase; 74.5 42 0.0014 29.0 15.9 82 116-205 84-180 (322)
210 3frx_A Guanine nucleotide-bind 73.9 26 0.00091 30.3 10.7 59 171-244 76-136 (319)
211 4h5i_A Guanine nucleotide-exch 73.1 50 0.0017 29.3 15.0 81 139-232 158-241 (365)
212 3hxj_A Pyrrolo-quinoline quino 72.3 39 0.0013 29.0 11.4 71 140-227 80-153 (330)
213 1sqj_A OXG-RCBH, oligoxylogluc 72.1 85 0.0029 31.5 22.6 200 91-326 38-279 (789)
214 1yr2_A Prolyl oligopeptidase; 71.7 81 0.0028 31.1 16.2 86 189-285 293-383 (741)
215 3e5z_A Putative gluconolactona 71.4 46 0.0016 28.1 15.5 86 123-227 41-131 (296)
216 1kv9_A Type II quinohemoprotei 70.8 83 0.0028 30.8 21.8 97 116-228 61-169 (668)
217 1flg_A Protein (quinoprotein e 70.5 78 0.0027 30.4 18.9 73 117-205 64-144 (582)
218 2xyi_A Probable histone-bindin 70.1 63 0.0022 29.2 13.6 64 121-199 243-309 (430)
219 1yiq_A Quinohemoprotein alcoho 69.9 28 0.00096 34.4 10.8 120 217-377 66-199 (689)
220 3e5z_A Putative gluconolactona 69.1 52 0.0018 27.8 17.6 145 35-202 41-206 (296)
221 1pjx_A Dfpase, DIISOPROPYLFLUO 68.4 54 0.0018 27.7 15.4 148 33-198 28-206 (314)
222 1k32_A Tricorn protease; prote 67.4 76 0.0026 32.9 14.0 241 91-379 318-607 (1045)
223 3v65_B Low-density lipoprotein 66.5 73 0.0025 28.6 21.1 114 91-228 97-220 (386)
224 2mad_H Methylamine dehydrogena 66.0 74 0.0025 28.5 26.1 110 33-151 32-160 (373)
225 1su3_A Interstitial collagenas 65.8 45 0.0015 31.0 10.6 61 121-203 367-436 (450)
226 1su3_A Interstitial collagenas 65.4 28 0.00096 32.4 9.1 52 166-229 267-326 (450)
227 1npe_A Nidogen, entactin; glyc 65.0 60 0.002 27.0 19.8 90 121-228 47-140 (267)
228 2ghs_A AGR_C_1268P; regucalcin 65.0 36 0.0012 29.7 9.6 140 34-198 61-209 (326)
229 1nr0_A Actin interacting prote 64.5 1E+02 0.0035 29.5 21.3 102 121-243 250-352 (611)
230 3o4h_A Acylamino-acid-releasin 64.3 98 0.0033 29.3 14.7 198 118-376 29-231 (582)
231 3lrv_A PRE-mRNA-splicing facto 64.1 72 0.0025 27.6 14.3 152 33-204 138-299 (343)
232 3ju4_A Endo-N-acetylneuraminid 63.2 92 0.0031 28.5 12.3 65 115-180 342-406 (670)
233 4h5i_A Guanine nucleotide-exch 61.5 86 0.0029 27.6 12.8 108 119-244 228-341 (365)
234 1n7d_A LDL receptor, low-densi 60.7 1.3E+02 0.0045 29.6 14.1 153 27-203 456-618 (699)
235 3ott_A Two-component system se 59.5 99 0.0034 30.6 12.6 116 92-231 495-617 (758)
236 2hz6_A Endoplasmic reticulum t 58.6 2.8 9.6E-05 38.0 0.9 51 167-230 5-57 (369)
237 1hxn_A Hemopexin, HPX; heme, b 58.1 78 0.0027 26.1 13.8 55 120-199 27-90 (219)
238 3f3f_A Nucleoporin SEH1; struc 57.9 85 0.0029 26.5 14.5 62 171-245 22-89 (351)
239 1ijq_A LDL receptor, low-densi 56.9 96 0.0033 26.8 18.8 175 27-228 33-225 (316)
240 3fvz_A Peptidyl-glycine alpha- 56.6 97 0.0033 26.7 23.8 128 90-230 69-216 (329)
241 3ott_A Two-component system se 55.1 1.7E+02 0.0057 28.9 17.2 136 33-199 482-626 (758)
242 2p4o_A Hypothetical protein; p 52.8 1.1E+02 0.0037 26.1 19.3 95 89-200 52-148 (306)
243 1ijq_A LDL receptor, low-densi 50.7 1.2E+02 0.0042 26.1 21.3 114 91-228 11-138 (316)
244 1pex_A Collagenase-3, MMP-13; 50.6 1E+02 0.0034 25.1 14.9 60 121-202 127-195 (207)
245 1flg_A Protein (quinoprotein e 50.5 1.5E+02 0.005 28.5 11.7 55 216-281 63-123 (582)
246 3a0f_A Xyloglucanase; beta-pro 48.7 2.1E+02 0.0074 28.4 23.1 110 92-210 45-175 (763)
247 3tc9_A Hypothetical hydrolase; 47.1 1.7E+02 0.0057 26.7 16.1 96 90-202 159-260 (430)
248 1pby_B Quinohemoprotein amine 46.8 92 0.0032 26.3 9.1 108 90-203 11-128 (337)
249 3hrp_A Uncharacterized protein 46.7 1.6E+02 0.0056 26.5 17.2 91 121-227 141-236 (409)
250 3v65_B Low-density lipoprotein 46.5 1.6E+02 0.0055 26.3 18.4 167 33-228 127-305 (386)
251 3hrp_A Uncharacterized protein 46.0 1.7E+02 0.0058 26.4 17.8 124 90-229 152-286 (409)
252 3v64_C Agrin; beta propeller, 45.9 1.6E+02 0.0053 25.9 19.9 169 33-228 84-262 (349)
253 3hxj_A Pyrrolo-quinoline quino 45.3 1.4E+02 0.0048 25.2 14.1 110 92-228 80-194 (330)
254 3m0c_C LDL receptor, low-densi 44.9 2.5E+02 0.0087 28.1 21.5 86 121-228 435-532 (791)
255 1itv_A MMP9; adaptive molecula 44.2 1.2E+02 0.0042 24.3 10.5 92 121-230 64-165 (195)
256 3fvz_A Peptidyl-glycine alpha- 43.9 1.5E+02 0.0053 25.4 26.5 166 49-230 69-259 (329)
257 1xfd_A DIP, dipeptidyl aminope 43.2 1.5E+02 0.0051 28.8 10.8 65 91-155 38-108 (723)
258 2gop_A Trilobed protease; beta 42.9 1.2E+02 0.0043 25.8 9.4 103 90-207 152-259 (347)
259 1jmx_B Amine dehydrogenase; ox 39.9 85 0.0029 26.8 7.7 67 121-203 10-78 (349)
260 3oyo_A Hemopexin fold protein 39.1 1.6E+02 0.0055 24.2 11.1 50 170-229 126-188 (225)
261 3tc9_A Hypothetical hydrolase; 38.2 96 0.0033 28.4 8.0 48 171-229 149-198 (430)
262 1sqj_A OXG-RCBH, oligoxylogluc 37.2 3.3E+02 0.011 27.2 27.3 231 99-379 3-276 (789)
263 1gen_A Gelatinase A; hydrolase 36.1 1.8E+02 0.0061 23.8 10.5 90 121-230 87-193 (218)
264 2cn3_A Xyloglucanase, beta-1,4 35.5 3.3E+02 0.011 26.8 25.2 237 99-380 10-291 (737)
265 4ggc_A P55CDC, cell division c 35.3 1.9E+02 0.0066 24.0 18.4 58 89-152 44-103 (318)
266 3qhy_B Beta-lactamase inhibito 34.9 1.8E+02 0.0063 24.6 8.8 17 164-180 73-89 (282)
267 3iuj_A Prolyl endopeptidase; h 34.2 3.3E+02 0.011 26.4 20.3 81 138-228 259-344 (693)
268 3c7x_A Matrix metalloproteinas 33.8 1.8E+02 0.0062 23.2 9.3 62 121-201 109-177 (196)
269 3qhy_B Beta-lactamase inhibito 33.8 2.2E+02 0.0075 24.1 12.3 20 22-41 30-49 (282)
270 3c75_H MADH, methylamine dehyd 33.7 2.8E+02 0.0095 25.3 14.9 112 32-151 83-213 (426)
271 3sjl_D Methylamine dehydrogena 33.6 67 0.0023 29.1 5.9 72 121-204 291-368 (386)
272 2cn3_A Xyloglucanase, beta-1,4 33.1 3.6E+02 0.012 26.5 19.6 82 147-230 231-322 (737)
273 4hvt_A Ritya.17583.B, post-pro 32.9 2E+02 0.007 28.4 9.7 91 189-283 268-367 (711)
274 1gen_A Gelatinase A; hydrolase 32.4 2.1E+02 0.007 23.4 11.7 152 16-201 20-204 (218)
275 3gre_A Serine/threonine-protei 32.4 2.7E+02 0.0091 24.7 15.3 67 121-202 181-248 (437)
276 3v64_C Agrin; beta propeller, 31.0 2.7E+02 0.0092 24.3 22.4 114 91-228 54-177 (349)
277 3gre_A Serine/threonine-protei 30.9 2.8E+02 0.0096 24.5 12.7 61 171-244 181-243 (437)
278 3lp9_A LS-24; SEED albumin, pl 29.8 37 0.0012 28.3 3.2 62 119-201 70-149 (227)
279 1yr2_A Prolyl oligopeptidase; 29.5 4.1E+02 0.014 25.9 12.1 102 91-205 295-401 (741)
280 2mad_H Methylamine dehydrogena 29.4 1.5E+02 0.0051 26.4 7.6 70 121-203 278-354 (373)
281 3oyo_A Hemopexin fold protein 29.4 1.9E+02 0.0064 23.8 7.6 59 121-198 127-197 (225)
282 3ba0_A Macrophage metalloelast 29.2 3.1E+02 0.011 24.4 16.9 63 121-204 284-355 (365)
283 3a0f_A Xyloglucanase; beta-pro 26.8 4.7E+02 0.016 25.8 19.8 199 140-379 45-291 (763)
284 3m0c_C LDL receptor, low-densi 26.6 5E+02 0.017 26.0 19.2 171 33-229 435-620 (791)
285 3dr2_A Exported gluconolactona 26.2 2.9E+02 0.0099 23.2 10.4 101 91-200 108-225 (305)
286 2oaj_A Protein SNI1; WD40 repe 22.6 6.1E+02 0.021 25.6 12.6 63 121-201 28-90 (902)
287 3ba0_A Macrophage metalloelast 22.6 4.1E+02 0.014 23.6 14.5 90 116-229 185-292 (365)
288 3vu4_A KMHSV2; beta-propeller 22.4 3.7E+02 0.013 23.1 17.1 23 33-60 70-92 (355)
289 3sjl_D Methylamine dehydrogena 21.8 4.4E+02 0.015 23.7 18.2 112 33-152 44-174 (386)
290 3p5b_L Low density lipoprotein 20.3 4.6E+02 0.016 23.3 22.4 116 91-228 93-220 (400)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.8e-47 Score=347.93 Aligned_cols=278 Identities=17% Similarity=0.247 Sum_probs=232.5
Q ss_pred HHHhhheeEcCEEEEecCCCCCcccceeeeeeCCCceeeecCCCCCCCceeEEeeecccccccccCcceEeecCCCCCeE
Q 016877 24 VMILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWE 103 (381)
Q Consensus 24 ~~~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 103 (381)
+..|+++.+++.||++||.++ .. .+.++.||+.+++|+
T Consensus 15 ~~~~~~~~~~~~i~v~GG~~~-~~-----------------------------------------~~~~~~~d~~~~~W~ 52 (308)
T 1zgk_A 15 PRGSHAPKVGRLIYTAGGYFR-QS-----------------------------------------LSYLEAYNPSNGTWL 52 (308)
T ss_dssp ------CCCCCCEEEECCBSS-SB-----------------------------------------CCCEEEEETTTTEEE
T ss_pred eCCccccCCCCEEEEEeCcCC-CC-----------------------------------------cceEEEEcCCCCeEe
Confidence 347999999999999999621 11 125778888999999
Q ss_pred EccCCCCCCCCceEEEECCEEEEEecCC---CCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCC
Q 016877 104 KMKAAPVPRLDGAAIQIKNLLYVFAGYG---SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQ 180 (381)
Q Consensus 104 ~l~~~p~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~ 180 (381)
+++++|.+|..|+++.++++|||+||.. ......+++++||+.+++|++++++|.+ |..+++++.+++||++||.
T Consensus 53 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~ 130 (308)
T 1zgk_A 53 RLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP--RNRIGVGVIDGHIYAVGGS 130 (308)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC--CBTCEEEEETTEEEEECCE
T ss_pred ECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC--ccccEEEEECCEEEEEcCC
Confidence 9999999999999999999999999983 2334567899999999999999998874 7888999999999999998
Q ss_pred CCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEec
Q 016877 181 YGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEI 260 (381)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 260 (381)
++.. .++++++||+.+++|+.++++|.+|..|++++++++||++||........+ ++.||+.+++|+.++
T Consensus 131 ~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-------~~~yd~~~~~W~~~~ 200 (308)
T 1zgk_A 131 HGCI---HHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNS-------AECYYPERNEWRMIT 200 (308)
T ss_dssp ETTE---ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCC-------EEEEETTTTEEEECC
T ss_pred CCCc---ccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCce-------EEEEeCCCCeEeeCC
Confidence 7643 368899999999999999999999999999999999999999876543333 334468899999999
Q ss_pred CCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceEEEEE
Q 016877 261 PIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLV 339 (381)
Q Consensus 261 ~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~~~~~ 339 (381)
++|.+|..++++.++++||++||.+... ..++++.|| .+++|+.++++|.+|.. ++++++
T Consensus 201 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p~~r~~--~~~~~~ 261 (308)
T 1zgk_A 201 AMNTIRSGAGVCVLHNCIYAAGGYDGQD-----------------QLNSVERYDVETETWTFVAPMKHRRSA--LGITVH 261 (308)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEECCCCSSCCBS--CEEEEE
T ss_pred CCCCccccceEEEECCEEEEEeCCCCCC-----------------ccceEEEEeCCCCcEEECCCCCCCccc--eEEEEE
Confidence 9999999999999999999999986432 267899999 89999999999888765 456789
Q ss_pred CCEEEEEcccccccCCceeeeeecceEEEEcCCCceEEeecC
Q 016877 340 NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLNAML 381 (381)
Q Consensus 340 ~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~~l 381 (381)
+++||++||.+... ..+++++||+++++|+.++.|
T Consensus 262 ~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~ 296 (308)
T 1zgk_A 262 QGRIYVLGGYDGHT-------FLDSVECYDPDTDTWSEVTRM 296 (308)
T ss_dssp TTEEEEECCBCSSC-------BCCEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEcCcCCCc-------ccceEEEEcCCCCEEeecCCC
Confidence 99999999987643 467899999999999998765
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.8e-45 Score=336.42 Aligned_cols=256 Identities=21% Similarity=0.339 Sum_probs=219.0
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD 170 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~ 170 (381)
.++.||+.+++|++++++|.+|..|+++.++++|||+||.+ ....+++++||+.+++|+.++++|. +|..|++++.
T Consensus 25 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~ 100 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPT--PRDSLAACAA 100 (306)
T ss_dssp SEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSS--CCBSCEEEEE
T ss_pred eEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCc--cccceeEEEE
Confidence 67788889999999999999999999999999999999987 4456889999999999999999887 4788999999
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCC
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGK 250 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 250 (381)
+++||++||.+... ..++++++||+.+++|+.++++|.+|..|++++++++||++||....... ......++.||
T Consensus 101 ~~~iyv~GG~~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~---~~~~~~~~~yd 175 (306)
T 3ii7_A 101 EGKIYTSGGSEVGN--SALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVS---GRVLNSCEVYD 175 (306)
T ss_dssp TTEEEEECCBBTTB--SCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTT---CEECCCEEEEE
T ss_pred CCEEEEECCCCCCC--cEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCc---ccccceEEEeC
Confidence 99999999987322 24789999999999999999999999999999999999999997654321 01122344456
Q ss_pred ccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCC
Q 016877 251 PLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPD 329 (381)
Q Consensus 251 ~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~ 329 (381)
+.+++|+.++++|.++..++++.++++||++||.+... ..++++.|| .+++|+.++++|.+|
T Consensus 176 ~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 176 PATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLG-----------------GLDNVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTE-----------------EBCCEEEEETTTTEEEECCCCSCCB
T ss_pred CCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCC-----------------CCceEEEeeCCCCcEEECCCCCCCc
Confidence 89999999999999999999999999999999986431 367899999 899999999998887
Q ss_pred CCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCceEEeecC
Q 016877 330 SHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLNAML 381 (381)
Q Consensus 330 ~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~~l 381 (381)
.. +++++++++|||+||.+... ..+++++||+++++|+.++.|
T Consensus 239 ~~--~~~~~~~~~i~v~GG~~~~~-------~~~~~~~yd~~~~~W~~~~~~ 281 (306)
T 3ii7_A 239 VT--VKCAAVGSIVYVLAGFQGVG-------RLGHILEYNTETDKWVANSKV 281 (306)
T ss_dssp SC--CEEEEETTEEEEEECBCSSS-------BCCEEEEEETTTTEEEEEEEE
T ss_pred cc--eeEEEECCEEEEEeCcCCCe-------eeeeEEEEcCCCCeEEeCCCc
Confidence 65 45678899999999987654 467899999999999998754
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.4e-45 Score=333.90 Aligned_cols=252 Identities=18% Similarity=0.296 Sum_probs=217.0
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD 170 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~ 170 (381)
.+++||+.+++|++++++|.+|..|+++.++++|||+||.+... ..+++++||+.+++|+.++++|. +|..|+++++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~ 107 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSL-RVRTVDSYDPVKDQWTSVANMRD--RRSTLGAAVL 107 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSS-BCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCc-cccceEEECCCCCceeeCCCCCc--cccceEEEEE
Confidence 57788888999999999999999999999999999999987554 45789999999999999999887 4788999999
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCC
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGK 250 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 250 (381)
+++||++||.++.. .++++++||+.+++|+.++++|.+|..|++++++++||++||...... .....++.||
T Consensus 108 ~~~iyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-----~~~~~~~~yd 179 (302)
T 2xn4_A 108 NGLLYAVGGFDGST---GLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASR-----QCLSTVECYN 179 (302)
T ss_dssp TTEEEEEEEECSSC---EEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTT-----EECCCEEEEE
T ss_pred CCEEEEEcCCCCCc---cCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCC-----ccccEEEEEe
Confidence 99999999987643 378999999999999999999999999999999999999999865321 1112344456
Q ss_pred ccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCC
Q 016877 251 PLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPD 329 (381)
Q Consensus 251 ~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~ 329 (381)
+.+++|+.++++|.+|..++++.++++||++||.+... ..++++.|| ++++|+.++++|.+|
T Consensus 180 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~~~~r 242 (302)
T 2xn4_A 180 ATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPL-----------------VRKSVEVYDPTTNAWRQVADMNMCR 242 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSS-----------------BCCCEEEEETTTTEEEEECCCSSCC
T ss_pred CCCCcEEECCCCccccccccEEEECCEEEEECCCCCCc-----------------ccceEEEEeCCCCCEeeCCCCCCcc
Confidence 89999999999999999999999999999999986432 356799999 899999999998887
Q ss_pred CCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCceEEee
Q 016877 330 SHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLNA 379 (381)
Q Consensus 330 ~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~ 379 (381)
.. ++++.++++||++||.+... ..+++++||+++++|+.++
T Consensus 243 ~~--~~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 243 RN--AGVCAVNGLLYVVGGDDGSC-------NLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp BS--CEEEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEECS
T ss_pred cc--CeEEEECCEEEEECCcCCCc-------ccccEEEEcCCCCeEEECC
Confidence 65 45688999999999987553 4578999999999999986
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.9e-45 Score=332.13 Aligned_cols=252 Identities=17% Similarity=0.294 Sum_probs=218.5
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCe---EecCCCCCCCCccceEEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT---WGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~~~r~~~~~ 167 (381)
.++.||+.+++|++++++|.+|..|+++.++++|||+||.+.. ...+++++||+.+++ |+.++++|. +|..|++
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~d~~~~~~~~W~~~~~~p~--~r~~~~~ 108 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGR-SRLSSVECLDYTADEDGVWYSVAPMNV--RRGLAGA 108 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCCEEEEETTCCTTCCCEEECCCSS--CCBSCEE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCC-ccCceEEEEECCCCCCCeeEECCCCCC--CccceeE
Confidence 5777888899999999999999999999999999999998744 346789999999999 999999887 4788899
Q ss_pred EEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeee
Q 016877 168 VTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVK 247 (381)
Q Consensus 168 ~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 247 (381)
+..+++||++||.++.. .++++++||+.+++|+.++++|.+|..|++++++++||++||.+....... ++
T Consensus 109 ~~~~~~lyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-------~~ 178 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDGSR---RHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNS-------VE 178 (301)
T ss_dssp EEETTEEEEECCBCSSC---BCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCC-------EE
T ss_pred EEECCEEEEEcccCCCc---ccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccce-------EE
Confidence 99999999999987643 378999999999999999999999999999999999999999876443333 33
Q ss_pred cCCccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCC
Q 016877 248 DGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMP 326 (381)
Q Consensus 248 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~ 326 (381)
.||+.+++|+.++++|.++..++++.++++||++||.+... ..++++.|| .+++|+.++.+|
T Consensus 179 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 179 KYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA-----------------HLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEEECCCS
T ss_pred EEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc-----------------ccceEEEEeCCCCcEEECCCCC
Confidence 44588999999999999999999999999999999987432 256799999 899999999998
Q ss_pred CCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCceEEeecC
Q 016877 327 KPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLNAML 381 (381)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~~l 381 (381)
.+|.. ++++.++++||++||.+... ..+++++||+++++|+.++.|
T Consensus 242 ~~r~~--~~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~ 287 (301)
T 2vpj_A 242 TPRCY--VGATVLRGRLYAIAGYDGNS-------LLSSIECYDPIIDSWEVVTSM 287 (301)
T ss_dssp SCCBS--CEEEEETTEEEEECCBCSSS-------BEEEEEEEETTTTEEEEEEEE
T ss_pred Ccccc--eeEEEECCEEEEEcCcCCCc-------ccccEEEEcCCCCeEEEcCCC
Confidence 88765 45688899999999987654 457899999999999998764
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=323.20 Aligned_cols=260 Identities=17% Similarity=0.249 Sum_probs=212.4
Q ss_pred ceEeecCCCCCeEEccCC--CCCCCCceEEEECCEEEEEecC-----CCCCCcccceEEEeCCCCeEecCCCCCCCCccc
Q 016877 91 TFQDLPAPELKWEKMKAA--PVPRLDGAAIQIKNLLYVFAGY-----GSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHS 163 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~--p~~r~~~~~~~~~~~iyv~GG~-----~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~ 163 (381)
.++.||+.+++|+. +++ |.+|.+|+++.++++|||+||. .......+++++||+.+++|+.++++|. +|.
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~ 90 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS--PRC 90 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS--CEE
T ss_pred ceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc--chh
Confidence 56777888889987 655 4589999999999999999996 2233345679999999999999999887 488
Q ss_pred eEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCC-CCCCCCCccce
Q 016877 164 HLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG-ENRYTPEVDHW 242 (381)
Q Consensus 164 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~~ 242 (381)
.|+++..+++||++||.+.......++++++||+.+++|+.++++|.+|..|++++++++|||+||.. ......+
T Consensus 91 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~---- 166 (315)
T 4asc_A 91 LFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNK---- 166 (315)
T ss_dssp SCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCC----
T ss_pred ceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccce----
Confidence 89999999999999997632222458999999999999999999999999999999999999999984 3222322
Q ss_pred EeeeecCCccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEE
Q 016877 243 SLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKV 321 (381)
Q Consensus 243 ~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~ 321 (381)
++.||+.+++|+.++++|.+|..++++.++++||++||..... ..++++.|| .+++|+.
T Consensus 167 ---~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 167 ---MCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG-----------------LTSSAEVYSITDNKWAP 226 (315)
T ss_dssp ---EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS-----------------EEEEEEEEETTTTEEEE
T ss_pred ---EEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCC-----------------ccceEEEEECCCCeEEE
Confidence 3344688999999999999999999999999999999986432 356799999 8999999
Q ss_pred cCCCCCCCCCcceEEEEECCEEEEEcccccccC--CceeeeeecceEEEEcCCCceEEee
Q 016877 322 LPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHP--TTKKMVLVGEIFQFNLNTLVAVLNA 379 (381)
Q Consensus 322 i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~--~~~~~~~~~~v~~yd~~~~~W~~i~ 379 (381)
++++|.+|.. ++++.++++||++||.+.... .......++++++||+++++|+.+.
T Consensus 227 ~~~~p~~r~~--~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 227 FEAFPQERSS--LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp ECCCSSCCBS--CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CCCCCCcccc--eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 9999888765 456889999999999865321 0011125679999999999999874
No 6
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.5e-43 Score=327.45 Aligned_cols=297 Identities=17% Similarity=0.166 Sum_probs=217.8
Q ss_pred HhhheeEcCEEEEecCCCCCcccceeeeeeCCCceeeecCCCCCCCceeEEeeecccccccccCcceEeecCC--CCCeE
Q 016877 26 ILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAP--ELKWE 103 (381)
Q Consensus 26 ~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~W~ 103 (381)
.|++++++++||++||.++ +.+++||+. +++|+
T Consensus 12 ~~~~~~~~~~iyv~GG~~~---------------------------------------------~~~~~~d~~~~~~~W~ 46 (357)
T 2uvk_A 12 SGTGAIDNDTVYIGLGSAG---------------------------------------------TAWYKLDTQAKDKKWT 46 (357)
T ss_dssp SCEEEEETTEEEEECGGGT---------------------------------------------TCEEEEETTSSSCCEE
T ss_pred ceEEEEECCEEEEEeCcCC---------------------------------------------CeEEEEccccCCCCee
Confidence 5778888999999999443 135566665 58999
Q ss_pred EccCCC-CCCCCceEEEECCEEEEEecC-C---CCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEc
Q 016877 104 KMKAAP-VPRLDGAAIQIKNLLYVFAGY-G---SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVT 178 (381)
Q Consensus 104 ~l~~~p-~~r~~~~~~~~~~~iyv~GG~-~---~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~G 178 (381)
+++++| .+|..|+++.++++|||+||. + .....++++++||+.+++|+++++++ |.+|..|++++.+++||++|
T Consensus 47 ~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~G 125 (357)
T 2uvk_A 47 ALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTG 125 (357)
T ss_dssp ECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEE
T ss_pred ECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-CcccccceEEEECCEEEEEe
Confidence 999999 899999999999999999998 2 23345688999999999999999998 55788999999999999999
Q ss_pred CCCCCCC-------------------------------CCCcceEEEEECCCCcEEeCCCCCCCCcc-cEEEEECCEEEE
Q 016877 179 GQYGPQC-------------------------------RGPTAHTFVLDTETKKWQDLPPLPVPRYA-PATQLWRGRLHV 226 (381)
Q Consensus 179 G~~~~~~-------------------------------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv 226 (381)
|.+.... ...++++++||+.+++|+.++++|.+|.. |++++++++|||
T Consensus 126 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv 205 (357)
T 2uvk_A 126 GVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWL 205 (357)
T ss_dssp CCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEE
T ss_pred CcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEE
Confidence 9764210 01258999999999999999999976554 999999999999
Q ss_pred EccCCCCCCCCCccceEeeeecCCccCCceEEecCC--CCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCce
Q 016877 227 MGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPI--PRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNE 304 (381)
Q Consensus 227 ~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~--p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~ 304 (381)
+||..... ....+ +.++++|+.+++|+.++++ |+.+..++++.++++||++||.....................
T Consensus 206 ~GG~~~~~-~~~~~---v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~ 281 (357)
T 2uvk_A 206 INGEAKPG-LRTDA---VFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGL 281 (357)
T ss_dssp ECCEEETT-EECCC---EEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTC
T ss_pred EeeecCCC-cccCc---eEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccc
Confidence 99975432 11122 2234456799999998877 455667779999999999999753210000000000000001
Q ss_pred eecCceeEeC-CCCCeEEcCCCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCceEEeec
Q 016877 305 VVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLNAM 380 (381)
Q Consensus 305 ~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~~ 380 (381)
...++++.|| ++++|+.++++|.+|.. ++++.++++|||+||.+.... .++++++|++++++|..+..
T Consensus 282 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~------~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 282 KKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGK------AVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGC------EEEEEEEEEC-CCSCEEEC-
T ss_pred cceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCC------EeeeEEEEEEcCcEeEeeec
Confidence 1234688898 89999999999988876 455889999999999986653 46799999999999987643
No 7
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-42 Score=319.05 Aligned_cols=286 Identities=18% Similarity=0.300 Sum_probs=231.3
Q ss_pred EcCEEEEecCCCCCcccceeeeeeCCCce-ee--ecCCCCCCCceeEEeee-ccccccc---------ccCcceEeecCC
Q 016877 32 VADFFWASSSKFTSSYLNIASNWSPYHNS-II--LPNNGPQKGENIGVKTK-KDVVPKR---------ILPATFQDLPAP 98 (381)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~--~p~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~ 98 (381)
.++.||++||. .+++|||.+++ .. +|...+|..++++..++ ++..|+. .+...++.||+.
T Consensus 14 ~~~~i~~~GG~-------~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~ 86 (318)
T 2woz_A 14 VKDLILLVNDT-------AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV 86 (318)
T ss_dssp EEEEEEEECSS-------EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT
T ss_pred ecchhhhcccc-------ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC
Confidence 46899999993 47999999999 33 33356788887776555 6666652 233348899999
Q ss_pred CCCeEEccCCCCCCCCceEEEECCEEEEEecCCC-CCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEE
Q 016877 99 ELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGS-IDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVV 177 (381)
Q Consensus 99 ~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~ 177 (381)
+++|++++++|.+|..|+++.++++|||+||.+. ....++++++||+.+++|+.++++|. +|..|++++.+++||++
T Consensus 87 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~ 164 (318)
T 2woz_A 87 SSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI--KVYGHNVISHNGMIYCL 164 (318)
T ss_dssp TTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS--CEESCEEEEETTEEEEE
T ss_pred CCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC--cccccEEEEECCEEEEE
Confidence 9999999999999999999999999999999863 34556889999999999999998887 47889999999999999
Q ss_pred cCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceE
Q 016877 178 TGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWR 257 (381)
Q Consensus 178 GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 257 (381)
||..... ..++++++||+++++|+.++++|.+|..|++++++++|||+||..... ....++.||+.+++|+
T Consensus 165 GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 165 GGKTDDK--KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG-------LSASVEAFDLKTNKWE 235 (318)
T ss_dssp CCEESSS--CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTE-------EEEEEEEEETTTCCEE
T ss_pred cCCCCCC--CccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCC-------ccceEEEEECCCCeEE
Confidence 9985433 247899999999999999999999999999999999999999976532 2334556679999999
Q ss_pred EecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceEE
Q 016877 258 TEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAW 336 (381)
Q Consensus 258 ~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~~ 336 (381)
.++++|.+|..++++.++++||++||........ ........++++.|| ++++|+.+ +|.+|..+ ++
T Consensus 236 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~--------~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~--~~ 303 (318)
T 2woz_A 236 VMTEFPQERSSISLVSLAGSLYAIGGFAMIQLES--------KEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYAS--GA 303 (318)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCCBC------------CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGT--TC
T ss_pred ECCCCCCcccceEEEEECCEEEEECCeeccCCCC--------ceeccceeeeEEEEeCCCCEehhh--cccccccc--cc
Confidence 9999999999999999999999999986531100 000112467899999 99999998 56666654 45
Q ss_pred EEECCEEEEEc
Q 016877 337 VLVNNSIVIVG 347 (381)
Q Consensus 337 ~~~~~~l~v~G 347 (381)
++++++||++.
T Consensus 304 ~~~~~~iyi~~ 314 (318)
T 2woz_A 304 SCLATRLNLFK 314 (318)
T ss_dssp EEEEEEEEGGG
T ss_pred eeeCCEEEEEE
Confidence 78899999874
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=6.3e-41 Score=307.98 Aligned_cols=259 Identities=19% Similarity=0.300 Sum_probs=210.1
Q ss_pred ceEeecCCCCCeEEcc-CCCCCCCCceEEEECCEEEEEecCCC----C-CCcccceEEEeCCCCeEecCCCCCCCCccce
Q 016877 91 TFQDLPAPELKWEKMK-AAPVPRLDGAAIQIKNLLYVFAGYGS----I-DYVHSHVDIYNFTDNTWGGRFDMPREMAHSH 164 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~-~~p~~r~~~~~~~~~~~iyv~GG~~~----~-~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~ 164 (381)
.++.||+.+++|...+ +.|.+|.+|+++..+++|||+||... . ....+++++||+.+++|+.++++|.+ |..
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA--RCL 102 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC--BCS
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc--ccc
Confidence 4789999999998843 23478999999999999999999631 1 12345699999999999999998884 788
Q ss_pred EEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCC-CCCCCccceE
Q 016877 165 LGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGEN-RYTPEVDHWS 243 (381)
Q Consensus 165 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~~ 243 (381)
|++++.+++||++||..... ...++++++||+.+++|+.++++|.+|..|++++++++||++||.... ....
T Consensus 103 ~~~~~~~~~iyv~GG~~~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~------ 175 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQT-EASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTN------ 175 (318)
T ss_dssp CEEEEETTEEEEEEEEBTTT-CCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCC------
T ss_pred cceEEECCEEEEEcCccCCC-CcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccc------
Confidence 99999999999999986422 134799999999999999999999999999999999999999997432 1222
Q ss_pred eeeecCCccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEc
Q 016877 244 LAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVL 322 (381)
Q Consensus 244 ~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i 322 (381)
.++.||+.+++|+.++++|.+|..++++.++++||++||..... ..++++.|| ++++|+.+
T Consensus 176 -~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 176 -RVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG-----------------LSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp -CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTE-----------------EEEEEEEEETTTCCEEEC
T ss_pred -eEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCC-----------------ccceEEEEECCCCeEEEC
Confidence 23445689999999999999999999999999999999986431 356799999 89999999
Q ss_pred CCCCCCCCCcceEEEEECCEEEEEcccccccCCce--eeeeecceEEEEcCCCceEEe
Q 016877 323 PSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTK--KMVLVGEIFQFNLNTLVAVLN 378 (381)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~--~~~~~~~v~~yd~~~~~W~~i 378 (381)
+++|.+|.. ++++.++++||++||.+....... .....+++|+||+++++|+.+
T Consensus 238 ~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 238 TEFPQERSS--ISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CCCSSCCBS--CEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCCCcccc--eEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 999888765 456899999999999875321000 011467899999999999987
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=300.50 Aligned_cols=285 Identities=15% Similarity=0.206 Sum_probs=234.8
Q ss_pred hheeEcCEEEEecCCCCCcccceeeeeeCCCce-eeecC-CCCCCCceeEEeee-ccccccc---ccCcceEeecCCCCC
Q 016877 28 GFALVADFFWASSSKFTSSYLNIASNWSPYHNS-IILPN-NGPQKGENIGVKTK-KDVVPKR---ILPATFQDLPAPELK 101 (381)
Q Consensus 28 ~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~-~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~ 101 (381)
..+.+++.||++||.+. ..++++++||+.+++ ..++. +.+|..++++..++ ++..++. .....++.||+.+++
T Consensus 10 ~~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQ 88 (302)
T ss_dssp -----CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTE
T ss_pred cccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCc
Confidence 34457899999999654 467889999999999 77776 67888888876655 6766653 234578999999999
Q ss_pred eEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCC
Q 016877 102 WEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQY 181 (381)
Q Consensus 102 W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~ 181 (381)
|++++++|.+|..|+++.++++|||+||.+... .++++++||+.+++|+.++++|. +|..+++++.+++||++||.+
T Consensus 89 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~ 165 (302)
T 2xn4_A 89 WTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNT--RRSSVGVGVVGGLLYAVGGYD 165 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCEE
T ss_pred eeeCCCCCccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCC--cccCceEEEECCEEEEEeCCC
Confidence 999999999999999999999999999987644 45789999999999999999987 478889999999999999987
Q ss_pred CCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecC
Q 016877 182 GPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIP 261 (381)
Q Consensus 182 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 261 (381)
+... ..++++++||+++++|+.++++|.+|..|++++++++||++||.+......+ ++.||+.+++|+.+++
T Consensus 166 ~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-------~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 166 VASR-QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKS-------VEVYDPTTNAWRQVAD 237 (302)
T ss_dssp TTTT-EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCC-------EEEEETTTTEEEEECC
T ss_pred CCCC-ccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccce-------EEEEeCCCCCEeeCCC
Confidence 6432 2368899999999999999999999999999999999999999875433333 3344688999999999
Q ss_pred CCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcC-CCCCCCCCcceEEEEE
Q 016877 262 IPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLP-SMPKPDSHIEFAWVLV 339 (381)
Q Consensus 262 ~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~-~~~~~~~~~~~~~~~~ 339 (381)
+|..|..++++.++++||++||.+... ..++++.|| ++++|+.++ .+|.+|..+ +++++
T Consensus 238 ~~~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~~~~~r~~~--~~~~~ 298 (302)
T 2xn4_A 238 MNMCRRNAGVCAVNGLLYVVGGDDGSC-----------------NLASVEYYNPTTDKWTVVSSCMSTGRSYA--GVTVI 298 (302)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEECSSCCSSCCBSC--EEEEE
T ss_pred CCCccccCeEEEECCEEEEECCcCCCc-----------------ccccEEEEcCCCCeEEECCcccCcccccc--eEEEe
Confidence 999998889999999999999986432 356799999 899999997 788887654 45777
Q ss_pred CCEE
Q 016877 340 NNSI 343 (381)
Q Consensus 340 ~~~l 343 (381)
+++|
T Consensus 299 ~~~i 302 (302)
T 2xn4_A 299 DKRL 302 (302)
T ss_dssp EC--
T ss_pred cccC
Confidence 7765
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=310.16 Aligned_cols=289 Identities=17% Similarity=0.240 Sum_probs=233.9
Q ss_pred EcCEEEEecCCCCCcccceeeeeeCCCce-e--eecCCCCCCCceeEEeee-ccccccc---------ccCcceEeecCC
Q 016877 32 VADFFWASSSKFTSSYLNIASNWSPYHNS-I--ILPNNGPQKGENIGVKTK-KDVVPKR---------ILPATFQDLPAP 98 (381)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~--~~p~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~ 98 (381)
+++.||++|| +++++|||.+++ . .+|.+.+|..++++..++ ++..++. .....++.||+.
T Consensus 3 ~~~~l~~~GG-------~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 3 LQDLIFMISE-------EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp CEEEEEEEET-------TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred cceEEEEEcC-------CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC
Confidence 5789999999 578999999999 3 333355788888876655 6665552 233458899999
Q ss_pred CCCeEEccCCCCCCCCceEEEECCEEEEEecCC--CCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEE
Q 016877 99 ELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYG--SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYV 176 (381)
Q Consensus 99 ~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv 176 (381)
+++|++++++|.+|..|+++.++++|||+||.+ ......+++++||+.+++|+.++++|. +|..|+++..+++||+
T Consensus 76 ~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv 153 (315)
T 4asc_A 76 DSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY--VVYGHTVLSHMDLVYV 153 (315)
T ss_dssp TTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEE
T ss_pred CCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC--cccceeEEEECCEEEE
Confidence 999999999999999999999999999999975 234567889999999999999999887 4788999999999999
Q ss_pred EcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCce
Q 016877 177 VTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEW 256 (381)
Q Consensus 177 ~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W 256 (381)
+||..... ..++++++||+.+++|+.++++|.+|..|++++++++|||+||..... ....++.||+.+++|
T Consensus 154 ~GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 154 IGGKGSDR--KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG-------LTSSAEVYSITDNKW 224 (315)
T ss_dssp ECCBCTTS--CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS-------EEEEEEEEETTTTEE
T ss_pred EeCCCCCC--cccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCC-------ccceEEEEECCCCeE
Confidence 99984432 347999999999999999999999999999999999999999986542 223455667999999
Q ss_pred EEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceE
Q 016877 257 RTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFA 335 (381)
Q Consensus 257 ~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~ 335 (381)
+.++++|.+|..++++.++++||++||.+.....+ ........++++.|| ++++|+.+ ++.+|..+ +
T Consensus 225 ~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~--------~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~--~ 292 (315)
T 4asc_A 225 APFEAFPQERSSLSLVSLVGTLYAIGGFATLETES--------GELVPTELNDIWRYNEEEKKWEGV--LREIAYAA--G 292 (315)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTT--------SCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCS--S
T ss_pred EECCCCCCcccceeEEEECCEEEEECCccccCcCC--------ccccccccCcEEEecCCCChhhhh--ccCCcCcc--c
Confidence 99999999999999999999999999985321000 001113467899999 89999999 45556654 4
Q ss_pred EEEECCEEEEEcccc
Q 016877 336 WVLVNNSIVIVGGTT 350 (381)
Q Consensus 336 ~~~~~~~l~v~GG~~ 350 (381)
+++++++||++....
T Consensus 293 ~~~~~~~l~v~~~~~ 307 (315)
T 4asc_A 293 ATFLPVRLNVLRLTK 307 (315)
T ss_dssp CEEEEEEECGGGSEE
T ss_pred eEEeCCEEEEEEehh
Confidence 588999999997643
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=8.1e-40 Score=299.26 Aligned_cols=242 Identities=18% Similarity=0.247 Sum_probs=204.4
Q ss_pred HhhheeEcCEEEEecCCCCCcccceeeeeeCCCceeeecCCCCCCCceeEEeeecccccccccCcceEeecCCCCCeEEc
Q 016877 26 ILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKM 105 (381)
Q Consensus 26 ~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~l 105 (381)
.|+++++++.||++||.+.... .....+.++.||+.+++|+++
T Consensus 63 ~~~~~~~~~~lyv~GG~~~~~~-------------------------------------~~~~~~~~~~~d~~~~~W~~~ 105 (308)
T 1zgk_A 63 GLAGCVVGGLLYAVGGRNNSPD-------------------------------------GNTDSSALDCYNPMTNQWSPC 105 (308)
T ss_dssp SCEEEEETTEEEEECCEEEETT-------------------------------------EEEECCCEEEEETTTTEEEEC
T ss_pred cceEEEECCEEEEECCCcCCCC-------------------------------------CCeecceEEEECCCCCeEeEC
Confidence 7889999999999999521000 001123678889899999999
Q ss_pred cCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCC
Q 016877 106 KAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQC 185 (381)
Q Consensus 106 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~ 185 (381)
+++|.+|..|+++.++++|||+||.+... .++++++||+.+++|+.++++|. +|..+++++.+++||++||.++...
T Consensus 106 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~ 182 (308)
T 1zgk_A 106 APMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLT--RRIGVGVAVLNRLLYAVGGFDGTNR 182 (308)
T ss_dssp CCCSSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEECCBCSSCB
T ss_pred CCCCcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCc--cccceEEEEECCEEEEEeCCCCCCc
Confidence 99999999999999999999999987543 45789999999999999999887 4788889999999999999876543
Q ss_pred CCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCC
Q 016877 186 RGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRG 265 (381)
Q Consensus 186 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~ 265 (381)
++++++||+.+++|+.++++|.+|..|++++++++||++||........+ ++.||+.+++|+.++++|..
T Consensus 183 ---~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-------v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 183 ---LNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNS-------VERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp ---CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCC-------EEEEETTTTEEEECCCCSSC
T ss_pred ---CceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccce-------EEEEeCCCCcEEECCCCCCC
Confidence 78999999999999999999999999999999999999999875433333 33445889999999999999
Q ss_pred CcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcce
Q 016877 266 GPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEF 334 (381)
Q Consensus 266 ~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~ 334 (381)
|..++++.++++||++||.+... ..++++.|| ++++|+.++++|.+|..+++
T Consensus 253 r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 305 (308)
T 1zgk_A 253 RSALGITVHQGRIYVLGGYDGHT-----------------FLDSVECYDPDTDTWSEVTRMTSGRSGVGV 305 (308)
T ss_dssp CBSCEEEEETTEEEEECCBCSSC-----------------BCCEEEEEETTTTEEEEEEECSSCCBSCEE
T ss_pred ccceEEEEECCEEEEEcCcCCCc-----------------ccceEEEEcCCCCEEeecCCCCCCccccee
Confidence 99999999999999999986432 367899999 89999999999999877654
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=8.4e-40 Score=298.77 Aligned_cols=274 Identities=16% Similarity=0.197 Sum_probs=233.9
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecC-CCCCCCceeEEeee-cccccccc--cCcceEeecCCCCCeEEccC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPN-NGPQKGENIGVKTK-KDVVPKRI--LPATFQDLPAPELKWEKMKA 107 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~-~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~W~~l~~ 107 (381)
.+.||++||.+. ++++++||+.+++ ..+++ +.+|..+.++..++ ++..++.. ....++.||+.+++|+++++
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred cceEEEEeCCCC---CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 489999999665 7899999999999 77777 77888888887766 77776642 44578999999999999999
Q ss_pred CCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCC-C
Q 016877 108 APVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQC-R 186 (381)
Q Consensus 108 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~-~ 186 (381)
+|.+|..|+++.++++|||+||.+.....++++++||+.+++|+.++++|.+ |..|+++..+++||++||...... .
T Consensus 88 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 88 PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ--RCSHGMVEANGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCEESCTTTC
T ss_pred CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC--cceeEEEEECCEEEEECCCCCCCCcc
Confidence 9999999999999999999999875555678899999999999999999874 788899999999999999866432 0
Q ss_pred CCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCC
Q 016877 187 GPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG 266 (381)
Q Consensus 187 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~ 266 (381)
..++++++||+++++|+.++++|.+|..|++++++++||++||.+...... .++.||+.+++|+.++++|..+
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~-------~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLD-------NVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBC-------CEEEEETTTTEEEECCCCSCCB
T ss_pred cccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCc-------eEEEeeCCCCcEEECCCCCCCc
Confidence 126899999999999999999999999999999999999999976542222 2444568999999999999999
Q ss_pred cceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceE
Q 016877 267 PHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFA 335 (381)
Q Consensus 267 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~ 335 (381)
..++++.++++||++||.+... ..++++.|| ++++|+.++++|.+|..++++
T Consensus 239 ~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 291 (306)
T 3ii7_A 239 VTVKCAAVGSIVYVLAGFQGVG-----------------RLGHILEYNTETDKWVANSKVRAFPVTSCLI 291 (306)
T ss_dssp SCCEEEEETTEEEEEECBCSSS-----------------BCCEEEEEETTTTEEEEEEEEECCSCTTCEE
T ss_pred cceeEEEECCEEEEEeCcCCCe-----------------eeeeEEEEcCCCCeEEeCCCcccccceeEEE
Confidence 9999999999999999986442 356899999 899999999999888876653
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=293.19 Aligned_cols=239 Identities=19% Similarity=0.280 Sum_probs=203.2
Q ss_pred HHhhheeEcCEEEEecCCCCCcccceeeeeeCCCceeeecCCCCCCCceeEEeeecccccccccCcceEeecCCCCC---
Q 016877 25 MILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELK--- 101 (381)
Q Consensus 25 ~~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 101 (381)
..|+++++++.||++||.++...++ .++.||+.+++
T Consensus 54 ~~~~~~~~~~~l~v~GG~~~~~~~~-----------------------------------------~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 54 RYVASVSLHDRIYVIGGYDGRSRLS-----------------------------------------SVECLDYTADEDGV 92 (301)
T ss_dssp BSCEEEEETTEEEEECCBCSSCBCC-----------------------------------------CEEEEETTCCTTCC
T ss_pred ccccEEEECCEEEEEcCCCCCccCc-----------------------------------------eEEEEECCCCCCCe
Confidence 4789999999999999966433322 56666777777
Q ss_pred eEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCC
Q 016877 102 WEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQY 181 (381)
Q Consensus 102 W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~ 181 (381)
|++++++|.+|..|+++.++++|||+||.+.... ++++++||+.+++|+.++++|. +|..|+++..+++||++||.+
T Consensus 93 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~ 169 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRR-HTSMERYDPNIDQWSMLGDMQT--AREGAGLVVASGVIYCLGGYD 169 (301)
T ss_dssp CEEECCCSSCCBSCEEEEETTEEEEECCBCSSCB-CCEEEEEETTTTEEEEEEECSS--CCBSCEEEEETTEEEEECCBC
T ss_pred eEECCCCCCCccceeEEEECCEEEEEcccCCCcc-cceEEEEcCCCCeEEECCCCCC--CcccceEEEECCEEEEECCCC
Confidence 9999999999999999999999999999886543 5789999999999999998887 478888999999999999987
Q ss_pred CCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecC
Q 016877 182 GPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIP 261 (381)
Q Consensus 182 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 261 (381)
+.. .++++++||+++++|+.++++|.+|..|++++++++||++||.+......+ ++.||+.+++|+.+++
T Consensus 170 ~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~-------v~~yd~~~~~W~~~~~ 239 (301)
T 2vpj_A 170 GLN---ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSS-------VEAYNIRTDSWTTVTS 239 (301)
T ss_dssp SSC---BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCC-------EEEEETTTTEEEEECC
T ss_pred CCc---ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccce-------EEEEeCCCCcEEECCC
Confidence 653 478999999999999999999999999999999999999999876443333 3344588999999999
Q ss_pred CCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcce
Q 016877 262 IPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEF 334 (381)
Q Consensus 262 ~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~ 334 (381)
+|..+..++++.++++||++||.+... ..++++.|| ++++|+.++++|.+|..+++
T Consensus 240 ~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~ 296 (301)
T 2vpj_A 240 MTTPRCYVGATVLRGRLYAIAGYDGNS-----------------LLSSIECYDPIIDSWEVVTSMGTQRCDAGV 296 (301)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSS-----------------BEEEEEEEETTTTEEEEEEEEEEEEESCEE
T ss_pred CCCcccceeEEEECCEEEEEcCcCCCc-----------------ccccEEEEcCCCCeEEEcCCCCcccccceE
Confidence 999999999999999999999986432 356799999 89999999999988776543
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=3.6e-38 Score=294.20 Aligned_cols=255 Identities=17% Similarity=0.205 Sum_probs=196.2
Q ss_pred EccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCC--CCeEecCCCCC-CCCccceEEEEEeCCEEEEEcCC
Q 016877 104 KMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFT--DNTWGGRFDMP-REMAHSHLGMVTDGRYIYVVTGQ 180 (381)
Q Consensus 104 ~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~~-~~~~r~~~~~~~~~~~iyv~GG~ 180 (381)
.+++||.+|.++++++++++|||+||.+. +++++||+. +++|+.+++|| . +|..|++++++++|||+||.
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~d~~~~~~~W~~~~~~p~~--~R~~~~~~~~~~~lyv~GG~ 74 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSAG-----TAWYKLDTQAKDKKWTALAAFPGG--PRDQATSAFIDGNLYVFGGI 74 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGGT-----TCEEEEETTSSSCCEEECCCCTTC--CCBSCEEEEETTEEEEECCE
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcCC-----CeEEEEccccCCCCeeECCCCCCC--cCccceEEEECCEEEEEcCC
Confidence 57899999999999999999999999763 369999998 49999999998 5 48889999999999999998
Q ss_pred -C-CCCCCCCcceEEEEECCCCcEEeCCCCC-CCCcccEEEEECCEEEEEccCCCCCCC----------CC---------
Q 016877 181 -Y-GPQCRGPTAHTFVLDTETKKWQDLPPLP-VPRYAPATQLWRGRLHVMGGSGENRYT----------PE--------- 238 (381)
Q Consensus 181 -~-~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~----------~~--------- 238 (381)
+ .......++++++||+.+++|+++++++ .+|..|++++++++|||+||.+...+. +.
T Consensus 75 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (357)
T 2uvk_A 75 GKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINA 154 (357)
T ss_dssp EECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhh
Confidence 3 1111234789999999999999999988 999999999999999999998642100 00
Q ss_pred --------ccceEeeeecCCccCCceEEecCCCCCCcc-eeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCc
Q 016877 239 --------VDHWSLAVKDGKPLEKEWRTEIPIPRGGPH-RACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDD 309 (381)
Q Consensus 239 --------~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~-~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (381)
...+...++.||+.+++|+.++++|..+.. ++++.++++||++||..... ...++
T Consensus 155 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~----------------~~~~~ 218 (357)
T 2uvk_A 155 HYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG----------------LRTDA 218 (357)
T ss_dssp HHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETT----------------EECCC
T ss_pred hhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCC----------------cccCc
Confidence 001223455667999999999988876544 78999999999999975321 13556
Q ss_pred eeEe--C-CCCCeEEcCCCCCCCCCcceEEEEECCEEEEEcccccccCC----------ceeeeeecceEEEEcCCCceE
Q 016877 310 VYML--D-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPT----------TKKMVLVGEIFQFNLNTLVAV 376 (381)
Q Consensus 310 v~~y--d-~~~~W~~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~----------~~~~~~~~~v~~yd~~~~~W~ 376 (381)
++.| | .+++|+.+++++.++.++.+++++.+++|||+||.+..... ......++++++||+++++|+
T Consensus 219 v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~ 298 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD 298 (357)
T ss_dssp EEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE
T ss_pred eEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee
Confidence 7666 4 68899999999888888888889999999999997643100 000002457999999999999
Q ss_pred EeecC
Q 016877 377 LNAML 381 (381)
Q Consensus 377 ~i~~l 381 (381)
.++.|
T Consensus 299 ~~~~~ 303 (357)
T 2uvk_A 299 KSGEL 303 (357)
T ss_dssp EEEEC
T ss_pred eCCCC
Confidence 98764
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=5.1e-36 Score=302.00 Aligned_cols=274 Identities=12% Similarity=0.080 Sum_probs=208.1
Q ss_pred HhhheeEcCEEEEecCCCCCcccceeeeeeCCCceeeecCCCCCCCceeEEeeecccccccccCcceEeecCCCCCeEEc
Q 016877 26 ILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKM 105 (381)
Q Consensus 26 ~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~l 105 (381)
+++++++++.||++||.++ ..+ +.++.||+.+++|+++
T Consensus 390 ~g~~~~~~~~iyv~GG~~~-~~~-----------------------------------------~~v~~yd~~~~~W~~~ 427 (695)
T 2zwa_A 390 FGDVDVAGNDVFYMGGSNP-YRV-----------------------------------------NEILQLSIHYDKIDMK 427 (695)
T ss_dssp SCEEEECSSCEEEECCBSS-SBC-----------------------------------------CCEEEEEECSSCEEEE
T ss_pred eeEEEEECCEEEEECCCCC-CCc-----------------------------------------CcEEEEECCCCeEEEe
Confidence 4555668999999999554 332 2466777788889888
Q ss_pred c-C-----CCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEE
Q 016877 106 K-A-----APVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYV 176 (381)
Q Consensus 106 ~-~-----~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv 176 (381)
+ + +|.+|..|+++.+ +++|||+||.+.....++++|+||+.+++|+.++++|. +|..|+++++ +++|||
T Consensus 428 ~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~--~R~~h~~~~~~~~~iyv 505 (695)
T 2zwa_A 428 NIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH--TRFRHSACSLPDGNVLI 505 (695)
T ss_dssp ECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB--CCBSCEEEECTTSCEEE
T ss_pred ccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC--CcccceEEEEcCCEEEE
Confidence 7 5 8999999999999 99999999998766567889999999999999999987 4788888886 999999
Q ss_pred EcCCCCCCCCCCcceEEEEECCCCcEEeCCC---CCCCCcccEEEEEC---CEEEEEccCCCCCCCCCccceEeeeecCC
Q 016877 177 VTGQYGPQCRGPTAHTFVLDTETKKWQDLPP---LPVPRYAPATQLWR---GRLHVMGGSGENRYTPEVDHWSLAVKDGK 250 (381)
Q Consensus 177 ~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 250 (381)
+||.+... ++++||+.+++|+.+++ +|.+|..|++++++ ++|||+||....... ....++.||
T Consensus 506 ~GG~~~~~------~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~-----~~~~v~~yd 574 (695)
T 2zwa_A 506 LGGVTEGP------AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTT-----VSDKAIIFK 574 (695)
T ss_dssp ECCBCSSC------SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSC-----BCCEEEEEE
T ss_pred ECCCCCCC------CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCe-----eeCcEEEEE
Confidence 99987633 79999999999999986 89999999988877 899999998543211 112234445
Q ss_pred ccCCc------eEEecCC-CCCCcceeEEEeC-CEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEE
Q 016877 251 PLEKE------WRTEIPI-PRGGPHRACVVVD-DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKV 321 (381)
Q Consensus 251 ~~~~~------W~~~~~~-p~~~~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~ 321 (381)
+.+++ |+.+.++ +.+|..++++.++ ++||++||.+.... ....++++.|| .+++|+.
T Consensus 575 ~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~--------------~~~~~~v~~yd~~t~~W~~ 640 (695)
T 2zwa_A 575 YDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL--------------FDRTNSIISLDPLSETLTS 640 (695)
T ss_dssp ECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC--------------CCTTTSEEEEETTTTEEEE
T ss_pred ccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC--------------CCCCCeEEEEECCCCeEEE
Confidence 77888 8888665 4677778899998 99999999864321 11367899999 8999996
Q ss_pred cCCCCCC------CCCcceEEEEECC-EEEEEcccccccCCceeeeeecceEEEEcCC
Q 016877 322 LPSMPKP------DSHIEFAWVLVNN-SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNT 372 (381)
Q Consensus 322 i~~~~~~------~~~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 372 (381)
++ +|.. ..+.+++++.+++ +|||+||....-. .+.+.+++|.+|+..
T Consensus 641 ~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfs---fGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 641 IP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYG---FGSVTNVGLKLIAIA 694 (695)
T ss_dssp CC-CCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTT---SCEEECCCEEEEECC
T ss_pred ee-ccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcC---ccccccceEEEEEEc
Confidence 53 2211 1234455566665 9999999653211 112567899998764
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=2.3e-34 Score=289.34 Aligned_cols=324 Identities=13% Similarity=0.073 Sum_probs=228.5
Q ss_pred hhheeE--cCEEEEecCCCCCc------ccceeeeeeCCCce-eeecC-CCCCCCce--eEEe--eecccccccccCcce
Q 016877 27 LGFALV--ADFFWASSSKFTSS------YLNIASNWSPYHNS-IILPN-NGPQKGEN--IGVK--TKKDVVPKRILPATF 92 (381)
Q Consensus 27 ~~~~~~--~~~ly~~GG~~~~~------~~~~~~~~d~~~~~-~~~p~-~~~~~~~~--~~~~--~~~~~~~~~~~~~~~ 92 (381)
|+++++ +++||++||.+... .++.+++||+.+++ ..++. ..+|..++ .+.. +.++..++.... .+
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-~v 267 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK-KT 267 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT-CE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC-ce
Confidence 445555 99999999965321 34579999999999 55555 44454443 4433 337777775433 79
Q ss_pred EeecCCCCCeEEccCCCCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCC-----CCCCCCccceEE
Q 016877 93 QDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF-----DMPREMAHSHLG 166 (381)
Q Consensus 93 ~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-----~~~~~~~r~~~~ 166 (381)
++||+.+++|+++++||.+|..|+++.+ +++|||+||........+++++||+.+++|+.++ +|+. .|. ++
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~--~~~-~~ 344 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLT--ADK-QG 344 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCC--CCT-TG
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccc--ccc-cc
Confidence 9999999999999999999999999999 9999999995444445678999999999999974 3333 233 35
Q ss_pred EEEeCCEEEEEcCCCCCCC-CCCcceEEEEECCCCcEEeCCC-CCC------CCcccEEEE---ECCEEEEEccCCCCCC
Q 016877 167 MVTDGRYIYVVTGQYGPQC-RGPTAHTFVLDTETKKWQDLPP-LPV------PRYAPATQL---WRGRLHVMGGSGENRY 235 (381)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~~-~~~~~~~~~yd~~~~~W~~~~~-~p~------~r~~~~~~~---~~~~lyv~GG~~~~~~ 235 (381)
++..++++|++||.++... ....++++.||+++++|..... .+. ++..++++. .+++||++||......
T Consensus 345 ~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~ 424 (656)
T 1k3i_A 345 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD 424 (656)
T ss_dssp GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS
T ss_pred eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC
Confidence 5568899999999865311 1236889999999999875432 211 233444443 4899999999653110
Q ss_pred C-CCccceEeeeecCCccCCceEEec--CCCCCCcceeEEEe-CCEEEEEccCCCCCCCCCCCCccccccCceeecCcee
Q 016877 236 T-PEVDHWSLAVKDGKPLEKEWRTEI--PIPRGGPHRACVVV-DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVY 311 (381)
Q Consensus 236 ~-~~~~~~~~~~~~~~~~~~~W~~~~--~~p~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (381)
. ....+. .++.||+.+++|+.+. +||.+|..++++.+ +++||++||.+.... ........+++
T Consensus 425 ~~~~~~~~--~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~-----------~~~~~~~~~v~ 491 (656)
T 1k3i_A 425 SDATTNAH--IITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIP-----------FEDSTPVFTPE 491 (656)
T ss_dssp SBCCCCEE--EEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCT-----------TCCCSBCCCCE
T ss_pred CCcCCcce--EEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcC-----------cCCCCcccceE
Confidence 1 111111 3556789999999986 89999988888887 999999999763210 00112356789
Q ss_pred EeC-CCCCeEEcCCCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcC
Q 016877 312 MLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLN 371 (381)
Q Consensus 312 ~yd-~~~~W~~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~ 371 (381)
.|| .+++|+.+++++.+|..|++++...+++||++||........ ..-++++|.|.
T Consensus 492 ~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~~~----~~~~~e~~~Pp 548 (656)
T 1k3i_A 492 IYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTT----NHFDAQIFTPN 548 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCSC----CCCEEEEEECG
T ss_pred EEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCCCCCCCCC----CeeEEEEEeCh
Confidence 999 899999999999999887654333499999999963321100 12356777763
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=3.7e-34 Score=288.44 Aligned_cols=242 Identities=14% Similarity=0.160 Sum_probs=191.8
Q ss_pred CeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCC-CCC---CCCccceEEEEEe--CCEE
Q 016877 101 KWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF-DMP---REMAHSHLGMVTD--GRYI 174 (381)
Q Consensus 101 ~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~~---~~~~r~~~~~~~~--~~~i 174 (381)
+|...+..|.+|.++ +++++++|||+||.+. ...+++++||+.+++|+.++ ++| .|.+|..|+++++ +++|
T Consensus 378 ~~~~~~~~p~rr~g~-~~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~l 454 (695)
T 2zwa_A 378 QLLECECPINRKFGD-VDVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQL 454 (695)
T ss_dssp EEEECCCTTCCBSCE-EEECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEE
T ss_pred eEeccCCCCCCceeE-EEEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEE
Confidence 344445555555554 4558999999999876 45678999999999999998 643 3446889999999 9999
Q ss_pred EEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CCEEEEEccCCCCCCCCCccceEeeeecCCccC
Q 016877 175 YVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLE 253 (381)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 253 (381)
||+||.+.... .++++|+||+.+++|+.++++|.+|..|+++++ +++|||+||.+... .++.||+.+
T Consensus 455 yv~GG~~~~~~--~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----------~v~~yd~~t 522 (695)
T 2zwa_A 455 LLIGGRKAPHQ--GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----------AMLLYNVTE 522 (695)
T ss_dssp EEECCBSSTTC--BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----------SEEEEETTT
T ss_pred EEEcCCCCCCC--ccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----------CEEEEECCC
Confidence 99999876542 478999999999999999999999999999996 99999999986543 344556999
Q ss_pred CceEEecC---CCCCCcceeEEEeC---CEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCC------eE
Q 016877 254 KEWRTEIP---IPRGGPHRACVVVD---DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMK------WK 320 (381)
Q Consensus 254 ~~W~~~~~---~p~~~~~~~~~~~~---~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~------W~ 320 (381)
++|+.+++ +|.+|..+++++++ ++||++||..... ....++++.|| .+++ |+
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~---------------~~~~~~v~~yd~~~~~w~~~~~W~ 587 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ---------------TTVSDKAIIFKYDAENATEPITVI 587 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS---------------SCBCCEEEEEEECTTCSSCCEEEE
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC---------------CeeeCcEEEEEccCCccccceEEE
Confidence 99999876 78888888877776 8999999985431 11467899999 8888 89
Q ss_pred EcCCC-CCCCCCcceEEEEEC-CEEEEEcccccccCCceeeeeecceEEEEcCCCceEEe
Q 016877 321 VLPSM-PKPDSHIEFAWVLVN-NSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLN 378 (381)
Q Consensus 321 ~i~~~-~~~~~~~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i 378 (381)
.+.++ +.+|.. +++++++ ++|||+||.+..... ...+++++||+++++|+.+
T Consensus 588 ~~~~~p~~~R~~--~~~~~~~~~~iyv~GG~~~~~~~----~~~~~v~~yd~~t~~W~~~ 641 (695)
T 2zwa_A 588 KKLQHPLFQRYG--SQIKYITPRKLLIVGGTSPSGLF----DRTNSIISLDPLSETLTSI 641 (695)
T ss_dssp EEEECGGGCCBS--CEEEEEETTEEEEECCBCSSCCC----CTTTSEEEEETTTTEEEEC
T ss_pred EcCCCCCCCccc--ceEEEeCCCEEEEECCccCCCCC----CCCCeEEEEECCCCeEEEe
Confidence 88775 355554 5567888 999999998754311 1357899999999999854
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.4e-32 Score=276.36 Aligned_cols=303 Identities=11% Similarity=0.002 Sum_probs=208.5
Q ss_pred eeeeeCCCce-eeecCCCCCCCceeEEe--ee-cccccccc---------cCcceEeecCCCCCeEEccCCCCCCCCce-
Q 016877 51 ASNWSPYHNS-IILPNNGPQKGENIGVK--TK-KDVVPKRI---------LPATFQDLPAPELKWEKMKAAPVPRLDGA- 116 (381)
Q Consensus 51 ~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~~-~~~~~~~~---------~~~~~~~~~~~~~~W~~l~~~p~~r~~~~- 116 (381)
++.|||.+++ ..+++ .|+..+..++. ++ ++..++.. ....++.||+.+++|++++++|.+|..++
T Consensus 168 ~~~~dp~~~~W~~~~~-~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~ 246 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTID-LPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP 246 (656)
T ss_dssp CCCCCTTSCEEEEEEE-CSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC
T ss_pred cccCCCCCCeeeeecc-CCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc
Confidence 6788999998 55544 24444455544 23 55554321 12368899999999999999998887654
Q ss_pred -EE-EECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEE
Q 016877 117 -AI-QIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTF 193 (381)
Q Consensus 117 -~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~ 193 (381)
++ ..+++||++||.+.. ++++||+.+++|+++++|+. +|..|+++++ +++||++||..... ...++++
T Consensus 247 ~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~--~R~~~s~~~~~dg~iyv~GG~~~~~--~~~~~~e 317 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQV--ARGYQSSATMSDGRVFTIGGSWSGG--VFEKNGE 317 (656)
T ss_dssp EEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSS--CCSSCEEEECTTSCEEEECCCCCSS--SCCCCEE
T ss_pred cccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCc--cccccceEEecCCeEEEEeCcccCC--cccccce
Confidence 33 358999999997642 69999999999999999987 4788888888 99999999953322 1378899
Q ss_pred EEECCCCcEEeC-----CCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCC----
Q 016877 194 VLDTETKKWQDL-----PPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPR---- 264 (381)
Q Consensus 194 ~yd~~~~~W~~~-----~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~---- 264 (381)
+||+++++|+.+ .+++..|.. +++..++++|++||.++..+... ....++.||+.+++|......+.
T Consensus 318 ~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~---~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 318 VYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAG---PSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp EEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECC---SSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred EeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEec---CccceeeeecCCcceeecCCccccccc
Confidence 999999999997 456666553 55568999999999765321100 01134455688999876433221
Q ss_pred ---CCcceeEEE---eCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcC--CCCCCCCCcceE
Q 016877 265 ---GGPHRACVV---VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLP--SMPKPDSHIEFA 335 (381)
Q Consensus 265 ---~~~~~~~~~---~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~--~~~~~~~~~~~~ 335 (381)
.+..++++. .+++||++||........ ... ...+++.|| .+++|+.+. .||.+|..+ +
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~-------~~~----~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~--~ 460 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD-------ATT----NAHIITLGEPGTSPNTVFASNGLYFARTFH--T 460 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB-------CCC----CEEEEECCSTTSCCEEEECTTCCSSCCBSC--E
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC-------cCC----cceEEEcCCCCCCCeeEEccCCCCCCcccC--C
Confidence 122234443 589999999975321100 000 112588899 899999986 788887654 4
Q ss_pred EEEE-CCEEEEEcccccccCCceeeeeecceEEEEcCCCceEEeecC
Q 016877 336 WVLV-NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLNAML 381 (381)
Q Consensus 336 ~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~~l 381 (381)
++++ +++|||+||.+...... ......++++||+++++|+.++.|
T Consensus 461 ~~~l~~g~i~v~GG~~~~~~~~-~~~~~~~v~~ydp~t~~W~~~~~~ 506 (656)
T 1k3i_A 461 SVVLPDGSTFITGGQRRGIPFE-DSTPVFTPEIYVPEQDTFYKQNPN 506 (656)
T ss_dssp EEECTTSCEEEECCBSBCCTTC-CCSBCCCCEEEEGGGTEEEECCCC
T ss_pred eEECCCCCEEEECCcccCcCcC-CCCcccceEEEcCCCCceeecCCC
Confidence 4555 99999999976321100 001456899999999999988754
No 19
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.92 E-value=0.013 Score=53.67 Aligned_cols=263 Identities=14% Similarity=0.161 Sum_probs=136.1
Q ss_pred hheeEcCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCC-------CCCc--eeEEeee-cccccccccCcceEee
Q 016877 28 GFALVADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGP-------QKGE--NIGVKTK-KDVVPKRILPATFQDL 95 (381)
Q Consensus 28 ~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~-------~~~~--~~~~~~~-~~~~~~~~~~~~~~~~ 95 (381)
.-++.++.||+... .+.+.+||+++++ ........ .... .....++ ++.... ...++.+
T Consensus 48 ~p~v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a~ 118 (376)
T 3q7m_A 48 HPALADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYAL 118 (376)
T ss_dssp CCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEEE
T ss_pred ccEEECCEEEEEcC------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEEE
Confidence 56778999999863 1378999999888 33322110 1111 1112222 333221 2468899
Q ss_pred cCCCC--CeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCCCCccceEEEEEeC
Q 016877 96 PAPEL--KWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDG 171 (381)
Q Consensus 96 ~~~~~--~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~ 171 (381)
|..+. .|+.-.+ .. .....+..++.+|+... ...+.+||+.+.+ |+.-...+....+...+.+..+
T Consensus 119 d~~tG~~~W~~~~~--~~-~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~ 188 (376)
T 3q7m_A 119 NTSDGTVAWQTKVA--GE-ALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAF 188 (376)
T ss_dssp ETTTCCEEEEEECS--SC-CCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEET
T ss_pred ECCCCCEEEEEeCC--Cc-eEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEEC
Confidence 98766 5765322 11 12223455788887543 1358999998775 8764332221012223445567
Q ss_pred CEEEEEcCCCCCCCCCCcceEEEEECCCC--cEEeCCCCCCCC--------cccEEEEECCEEEEEccCCCCCCCCCccc
Q 016877 172 RYIYVVTGQYGPQCRGPTAHTFVLDTETK--KWQDLPPLPVPR--------YAPATQLWRGRLHVMGGSGENRYTPEVDH 241 (381)
Q Consensus 172 ~~iyv~GG~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r--------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 241 (381)
+.+|+ |.. ...+..+|+++. .|+.-...|... .....++.++.+|+.+. . .....
T Consensus 189 ~~v~~-g~~--------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~-----g~l~~ 253 (376)
T 3q7m_A 189 GAAVV-GGD--------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N-----GNLTA 253 (376)
T ss_dssp TEEEE-CCT--------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T-----SCEEE
T ss_pred CEEEE-EcC--------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C-----cEEEE
Confidence 87776 321 245889998765 476543322111 22333456888888742 1 11222
Q ss_pred eEeeeecCCccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CC--CC
Q 016877 242 WSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DE--MK 318 (381)
Q Consensus 242 ~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~--~~ 318 (381)
++. ...+..|+.... . ....+..+++||+.... ..++.+| .+ ..
T Consensus 254 ~d~-----~tG~~~w~~~~~----~-~~~~~~~~~~l~~~~~~-----------------------g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 254 LDL-----RSGQIMWKRELG----S-VNDFIVDGNRIYLVDQN-----------------------DRVMALTIDGGVTL 300 (376)
T ss_dssp EET-----TTCCEEEEECCC----C-EEEEEEETTEEEEEETT-----------------------CCEEEEETTTCCEE
T ss_pred EEC-----CCCcEEeeccCC----C-CCCceEECCEEEEEcCC-----------------------CeEEEEECCCCcEE
Confidence 221 122335765321 1 22456678888886532 1378887 43 45
Q ss_pred eEEcCCCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCc
Q 016877 319 WKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (381)
Q Consensus 319 W~~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 374 (381)
|+.-. +... .. .+.++.++.||+..... .+++||+++++
T Consensus 301 w~~~~-~~~~-~~--~~~~~~~~~l~v~~~~g-------------~l~~~d~~tG~ 339 (376)
T 3q7m_A 301 WTQSD-LLHR-LL--TSPVLYNGNLVVGDSEG-------------YLHWINVEDGR 339 (376)
T ss_dssp EEECT-TTTS-CC--CCCEEETTEEEEECTTS-------------EEEEEETTTCC
T ss_pred Eeecc-cCCC-cc--cCCEEECCEEEEEeCCC-------------eEEEEECCCCc
Confidence 87631 1111 11 22356788888864311 36777777665
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.75 E-value=0.0032 Score=56.85 Aligned_cols=185 Identities=9% Similarity=-0.004 Sum_probs=101.1
Q ss_pred hhheeEcCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEE-e-eecccccccccCcceEeecCCCCCe
Q 016877 27 LGFALVADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGV-K-TKKDVVPKRILPATFQDLPAPELKW 102 (381)
Q Consensus 27 ~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~W 102 (381)
+++++.++++|+.... -+.+..+|+.+.+ ..++.. ....+++. - +..+.... ....+..+|+.+.+-
T Consensus 47 ~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~--~~p~~i~~~~~g~lyv~~~--~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 47 QSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGF--TSPRYIHFLSDEKAYVTQI--WDYRIFIINPKTYEI 117 (328)
T ss_dssp EEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECC--SSEEEEEEEETTEEEEEEB--SCSEEEEEETTTTEE
T ss_pred eEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCC--CCCcEEEEeCCCeEEEEEC--CCCeEEEEECCCCeE
Confidence 4566779999999752 2478999999988 445431 11222332 1 22333321 245788999988764
Q ss_pred EEccCCCCC----CCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEc
Q 016877 103 EKMKAAPVP----RLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVT 178 (381)
Q Consensus 103 ~~l~~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~G 178 (381)
...-++... ..-..++..++++||..-. ..+.+.++|+.+++....-+... .-......-++++|+..
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-----~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~dG~l~v~~ 189 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-----YQNRILKIDTETDKVVDELTIGI---QPTSLVMDKYNKMWTIT 189 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEEETTEEEEEECT-----TCCEEEEEETTTTEEEEEEECSS---CBCCCEECTTSEEEEEB
T ss_pred EEEEEcCCccccCCCcceEEEECCEEEEEcCC-----CCCEEEEEECCCCeEEEEEEcCC---CccceEEcCCCCEEEEE
Confidence 322122110 0222344478899998520 12469999999987654222211 11122223468888875
Q ss_pred CCCCCC--CCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE--CCEEEEEc
Q 016877 179 GQYGPQ--CRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMG 228 (381)
Q Consensus 179 G~~~~~--~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~G 228 (381)
...... .....+.++++|+++.+....-.++....-..+++. ++.+|+..
T Consensus 190 ~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 190 DGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp CCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred CCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 322110 000136799999999876543234333233444554 56788873
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.52 E-value=0.047 Score=48.98 Aligned_cols=267 Identities=13% Similarity=0.114 Sum_probs=133.9
Q ss_pred cceeeeeeCCCce-ee-ecC-----CCCCCCceeEEeee-cccccccccCcceEeecCCCCCe-EEccCCCCCCCCceEE
Q 016877 48 LNIASNWSPYHNS-II-LPN-----NGPQKGENIGVKTK-KDVVPKRILPATFQDLPAPELKW-EKMKAAPVPRLDGAAI 118 (381)
Q Consensus 48 ~~~~~~~d~~~~~-~~-~p~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W-~~l~~~p~~r~~~~~~ 118 (381)
-+.+..+|+++++ .. +.. .......++...++ .+.... .+..+..+|+.+.+- ..++....| ..++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~--~~~~v~viD~~t~~~~~~i~~~~~p---~~i~ 90 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN--NSHVIFAIDINTFKEVGRITGFTSP---RYIH 90 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG--GGTEEEEEETTTCCEEEEEECCSSE---EEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc--CCCEEEEEECcccEEEEEcCCCCCC---cEEE
Confidence 4688999999988 22 211 11111223333222 333322 245788899988765 334322222 2333
Q ss_pred E-ECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCC--CccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEE
Q 016877 119 Q-IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPRE--MAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVL 195 (381)
Q Consensus 119 ~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~y 195 (381)
. -++++||.... ...+.++|+.+.+-...-+.... .......++..++++|+..- + ..+.+.++
T Consensus 91 ~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~--~-----~~~~v~vi 157 (328)
T 3dsm_A 91 FLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW--S-----YQNRILKI 157 (328)
T ss_dssp EEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC--T-----TCCEEEEE
T ss_pred EeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC--C-----CCCEEEEE
Confidence 3 67899998743 24689999998875431111110 00022234558999999841 0 13579999
Q ss_pred ECCCCcEEeCCCCCCCCcccEEEE-ECCEEEEEccCCCC--CCCCCccceEeeeecCCccCCceEEecCCCCCCcceeEE
Q 016877 196 DTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGEN--RYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACV 272 (381)
Q Consensus 196 d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~ 272 (381)
|+++.+....-+.. ..-+.++. -++++|+....... .+... .-.++.+|+.+.+......++.......++
T Consensus 158 D~~t~~~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~----~~~v~~id~~t~~v~~~~~~~~g~~p~~la 231 (328)
T 3dsm_A 158 DTETDKVVDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYE----APSLYRIDAETFTVEKQFKFKLGDWPSEVQ 231 (328)
T ss_dssp ETTTTEEEEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBC----CCEEEEEETTTTEEEEEEECCTTCCCEEEE
T ss_pred ECCCCeEEEEEEcC--CCccceEEcCCCCEEEEECCCccCCccccC----CceEEEEECCCCeEEEEEecCCCCCceeEE
Confidence 99998764422111 11122232 36888887532210 01000 011223346666655433344332223444
Q ss_pred Ee--CCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceEEEE--ECCEEEEEc
Q 016877 273 VV--DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVL--VNNSIVIVG 347 (381)
Q Consensus 273 ~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~~~~--~~~~l~v~G 347 (381)
.. ++.||+..+ .++.+| .+.+.......+.. .....++++ .++.||+..
T Consensus 232 ~~~d~~~lyv~~~-------------------------~v~~~d~~t~~~~~~~~~~~~-~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 232 LNGTRDTLYWINN-------------------------DIWRMPVEADRVPVRPFLEFR-DTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp ECTTSCEEEEESS-------------------------SEEEEETTCSSCCSSCSBCCC-SSCEEEEEECTTTCCEEEEE
T ss_pred EecCCCEEEEEcc-------------------------EEEEEECCCCceeeeeeecCC-CCceEEEEEcCCCCeEEEEc
Confidence 44 567888654 278888 55543221111211 111223344 268899986
Q ss_pred ccccccCCceeeeeecceEEEEcCC
Q 016877 348 GTTEKHPTTKKMVLVGEIFQFNLNT 372 (381)
Q Consensus 348 G~~~~~~~~~~~~~~~~v~~yd~~~ 372 (381)
..+-. ..+.|.+||++.
T Consensus 286 ~~~y~--------~~~~V~v~d~~g 302 (328)
T 3dsm_A 286 AIDYQ--------QQGIVYRYSPQG 302 (328)
T ss_dssp CTTSS--------SEEEEEEECTTC
T ss_pred ccccc--------cCCEEEEECCCC
Confidence 21100 013589999873
No 22
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.50 E-value=0.023 Score=48.69 Aligned_cols=109 Identities=18% Similarity=0.112 Sum_probs=74.9
Q ss_pred ccCCCCCCCC--ceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCC
Q 016877 105 MKAAPVPRLD--GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYG 182 (381)
Q Consensus 105 l~~~p~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~ 182 (381)
+...|..... +++...++.+|+..|..+. +.+.++|+++++=...-+++. .-+..+++..+++||+....
T Consensus 12 ~~~~phd~~~ftqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~-- 83 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTWR-- 83 (243)
T ss_dssp EEEEECCTTCCEEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESS--
T ss_pred EEEcCCCCccccccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEee--
Confidence 3334444444 3667778999999997653 358899999998766545554 23567788899999998542
Q ss_pred CCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEcc
Q 016877 183 PQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGG 229 (381)
Q Consensus 183 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 229 (381)
.+.+++||+++.+- +...+.+..+.+++.-+++||+.-|
T Consensus 84 ------~~~v~v~D~~tl~~--~~ti~~~~~Gwglt~dg~~L~vSdg 122 (243)
T 3mbr_X 84 ------NHEGFVYDLATLTP--RARFRYPGEGWALTSDDSHLYMSDG 122 (243)
T ss_dssp ------SSEEEEEETTTTEE--EEEEECSSCCCEEEECSSCEEEECS
T ss_pred ------CCEEEEEECCcCcE--EEEEeCCCCceEEeeCCCEEEEECC
Confidence 46799999988653 3333334456677766778888854
No 23
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.45 E-value=0.026 Score=52.81 Aligned_cols=263 Identities=12% Similarity=0.043 Sum_probs=124.5
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEeeecccccccccCcceEeecCCCCCeEEccCCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p~ 110 (381)
++...+.|+.++ .+..||..+.+ ..+.. +...-..+...+.....+ .....+..+|..+.+-. ..+..
T Consensus 128 ~g~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~l~s~--~~dg~i~vwd~~~~~~~--~~~~~ 197 (445)
T 2ovr_B 128 CGNRIVSGSDDN-----TLKVWSAVTGKCLRTLVG-HTGGVWSSQMRDNIIISG--STDRTLKVWNAETGECI--HTLYG 197 (445)
T ss_dssp ETTEEEEEETTS-----CEEEEETTTCCEEEECCC-CSSCEEEEEEETTEEEEE--ETTSCEEEEETTTTEEE--EEECC
T ss_pred cCCEEEEEECCC-----cEEEEECCCCcEEEEEcC-CCCCEEEEEecCCEEEEE--eCCCeEEEEECCcCcEE--EEECC
Confidence 455666676555 67889998877 33332 111111111111111111 12345677777665432 22222
Q ss_pred CCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcc
Q 016877 111 PRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTA 190 (381)
Q Consensus 111 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 190 (381)
......+...++..++.|+.+ ..+.+||..+.+-...-.... .....+..++..++.|+.++
T Consensus 198 h~~~v~~~~~~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~~----~~v~~~~~~~~~l~~~~~dg-------- 259 (445)
T 2ovr_B 198 HTSTVRCMHLHEKRVVSGSRD------ATLRVWDIETGQCLHVLMGHV----AAVRCVQYDGRRVVSGAYDF-------- 259 (445)
T ss_dssp CSSCEEEEEEETTEEEEEETT------SEEEEEESSSCCEEEEEECCS----SCEEEEEECSSCEEEEETTS--------
T ss_pred CCCcEEEEEecCCEEEEEeCC------CEEEEEECCCCcEEEEEcCCc----ccEEEEEECCCEEEEEcCCC--------
Confidence 222233344455556677654 357888888765332111111 11222333666677776443
Q ss_pred eEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCCccee
Q 016877 191 HTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRA 270 (381)
Q Consensus 191 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~ 270 (381)
.+..||+.+.+-.. .+............++..++.|+.++ .+..|++ .+.+- +..+........
T Consensus 260 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d~-----~i~i~d~-------~~~~~--~~~~~~~~~~v~ 323 (445)
T 2ovr_B 260 MVKVWDPETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLDT-----SIRVWDV-------ETGNC--IHTLTGHQSLTS 323 (445)
T ss_dssp CEEEEEGGGTEEEE--EECCCSSCEEEEEECSSEEEEEETTS-----CEEEEET-------TTCCE--EEEECCCCSCEE
T ss_pred EEEEEECCCCcEeE--EecCCCCceEEEEECCCEEEEEeCCC-----eEEEEEC-------CCCCE--EEEEcCCcccEE
Confidence 37788887654322 12211111222334777777777543 3555553 22221 111111111223
Q ss_pred EEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCe-EEcCCCCCCCCCcceEEEEECCEEEEEcc
Q 016877 271 CVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKW-KVLPSMPKPDSHIEFAWVLVNNSIVIVGG 348 (381)
Q Consensus 271 ~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W-~~i~~~~~~~~~~~~~~~~~~~~l~v~GG 348 (381)
+...++++++.|+.++. +..|| .+.+- ..+.. +.... .....+..++.+++.|+
T Consensus 324 ~~~~~~~~l~~~~~dg~----------------------i~vwd~~~~~~~~~~~~-~~~~~-~~v~~~~~~~~~l~s~~ 379 (445)
T 2ovr_B 324 GMELKDNILVSGNADST----------------------VKIWDIKTGQCLQTLQG-PNKHQ-SAVTCLQFNKNFVITSS 379 (445)
T ss_dssp EEEEETTEEEEEETTSC----------------------EEEEETTTCCEEEEECS-TTSCS-SCEEEEEECSSEEEEEE
T ss_pred EEEEeCCEEEEEeCCCe----------------------EEEEECCCCcEEEEEcc-CCCCC-CCEEEEEECCCEEEEEe
Confidence 44456667777776543 66666 43321 22211 11111 12334566778888887
Q ss_pred cccccCCceeeeeecceEEEEcCCCce
Q 016877 349 TTEKHPTTKKMVLVGEIFQFNLNTLVA 375 (381)
Q Consensus 349 ~~~~~~~~~~~~~~~~v~~yd~~~~~W 375 (381)
.++ .+.+||+++++.
T Consensus 380 ~dg------------~v~iwd~~~~~~ 394 (445)
T 2ovr_B 380 DDG------------TVKLWDLKTGEF 394 (445)
T ss_dssp TTS------------EEEEEETTTCCE
T ss_pred CCC------------eEEEEECCCCce
Confidence 653 367777766553
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.36 E-value=0.015 Score=49.84 Aligned_cols=109 Identities=19% Similarity=0.226 Sum_probs=71.0
Q ss_pred CCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCC
Q 016877 155 DMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENR 234 (381)
Q Consensus 155 ~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 234 (381)
..|.+...+-.++...++.+|+-.|..+ .+.+..+|+++.+=...-+++....+..++..+++||+....++
T Consensus 14 ~~phd~~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~-- 85 (243)
T 3mbr_X 14 RYPHDTTAFTEGLFYLRGHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNH-- 85 (243)
T ss_dssp EEECCTTCCEEEEEEETTEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSS--
T ss_pred EcCCCCccccccEEEECCEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCC--
Confidence 3344334556678888999999998765 35689999999986665566666677778889999999965432
Q ss_pred CCCCccceEeeeecCCccCCceEEecCCCCCCcceeEEEeCCEEEEEcc
Q 016877 235 YTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGG 283 (381)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG 283 (381)
....| |+.+.+ .+...+....+.+++..+++||+--|
T Consensus 86 ---~v~v~-------D~~tl~--~~~ti~~~~~Gwglt~dg~~L~vSdg 122 (243)
T 3mbr_X 86 ---EGFVY-------DLATLT--PRARFRYPGEGWALTSDDSHLYMSDG 122 (243)
T ss_dssp ---EEEEE-------ETTTTE--EEEEEECSSCCCEEEECSSCEEEECS
T ss_pred ---EEEEE-------ECCcCc--EEEEEeCCCCceEEeeCCCEEEEECC
Confidence 22222 233333 22222222234467777888999776
No 25
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.34 E-value=0.0098 Score=53.82 Aligned_cols=171 Identities=11% Similarity=0.035 Sum_probs=84.1
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE--C--CEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--K--NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 166 (381)
.+..+|....++..+..+........++.+ + +.+++.|+.+ ..+.+||..+++|..+..+... ...-.+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~-~~~v~~ 106 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQIAVHAVH-SASVNS 106 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETTEEEEEEEECCC-SSCEEE
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCCceeEeeeecCC-CcceEE
Confidence 456666655555554444333333333333 2 5677777764 2478889999887765544321 112233
Q ss_pred EEEeC---CEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCC-CCCCcccEEEEE--------------CCEEEEEc
Q 016877 167 MVTDG---RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPL-PVPRYAPATQLW--------------RGRLHVMG 228 (381)
Q Consensus 167 ~~~~~---~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~--------------~~~lyv~G 228 (381)
++... +.+++.|+.+ ..+..||..+..-.....+ .....-.+++.. ++.+++.|
T Consensus 107 ~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (379)
T 3jrp_A 107 VQWAPHEYGPLLLVASSD--------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 178 (379)
T ss_dssp EEECCGGGCSEEEEEETT--------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEE
T ss_pred EEeCCCCCCCEEEEecCC--------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEE
Confidence 33332 4566666543 3477888876521110000 111111222222 46777777
Q ss_pred cCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCCcceeEEEe--C---CEEEEEccCCC
Q 016877 229 GSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVV--D---DRLLVIGGQEG 286 (381)
Q Consensus 229 G~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~--~---~~l~v~GG~~~ 286 (381)
+.++ .+..|++. .....|.....+........++.+ + +++++.|+.++
T Consensus 179 ~~dg-----~i~i~d~~-----~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 179 GADN-----LVKIWKYN-----SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp ETTS-----CEEEEEEE-----TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred eCCC-----eEEEEEec-----CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 7543 46666653 233345444333322222223333 3 67888887654
No 26
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.31 E-value=0.0022 Score=58.91 Aligned_cols=166 Identities=16% Similarity=0.101 Sum_probs=85.1
Q ss_pred CEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEe--ee-cccccccccCcceEeecCCCCCeEEccCC
Q 016877 34 DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVK--TK-KDVVPKRILPATFQDLPAPELKWEKMKAA 108 (381)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~W~~l~~~ 108 (381)
+++|+.|+.++ .+..||..+++ ..++.... ..++... +. .+..+ .....+..+|..+.+....-..
T Consensus 2 ~~l~vs~~~d~-----~v~v~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~--~~d~~i~v~d~~~~~~~~~~~~ 72 (391)
T 1l0q_A 2 TFAYIANSESD-----NISVIDVTSNKVTATIPVGSN--PMGAVISPDGTKVYVAN--AHSNDVSIIDTATNNVIATVPA 72 (391)
T ss_dssp EEEEEEETTTT-----EEEEEETTTTEEEEEEECSSS--EEEEEECTTSSEEEEEE--GGGTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEcCCCC-----EEEEEECCCCeEEEEeecCCC--cceEEECCCCCEEEEEC--CCCCeEEEEECCCCeEEEEEEC
Confidence 46888887555 78999999887 33333211 1122211 11 11111 1234677888877654433222
Q ss_pred CCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe--CCEEEEEcCCCCCC
Q 016877 109 PVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQ 184 (381)
Q Consensus 109 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~ 184 (381)
+. .-..++.. +.+||+.+..+ ..+.+||+.+++-........ ...+++.. +..+|+.++.
T Consensus 73 ~~--~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~---- 136 (391)
T 1l0q_A 73 GS--SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTGK----SPLGLALSPDGKKLYVTNNG---- 136 (391)
T ss_dssp SS--SEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETT----
T ss_pred CC--CccceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCCC----CcceEEECCCCCEEEEEeCC----
Confidence 22 11222222 33677665432 358999999887654322221 12334443 3467777643
Q ss_pred CCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE--CCEEEEEccC
Q 016877 185 CRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGS 230 (381)
Q Consensus 185 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~ 230 (381)
...+..||+.+.+....-... ..-..++.. ++.+|+.++.
T Consensus 137 ----~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 137 ----DKTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp ----TTEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETT
T ss_pred ----CCEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCC
Confidence 246899999887654432221 111233332 3457676554
No 27
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.27 E-value=0.048 Score=50.97 Aligned_cols=211 Identities=13% Similarity=0.066 Sum_probs=99.4
Q ss_pred CEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEeeecccccccccCcceEeecCCCCCeEEccCCCCC
Q 016877 34 DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPVP 111 (381)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p~~ 111 (381)
+.+.+.|+.++ .+..||..+++ ..+.... ..-..+...+.....+ .....+..+|..+.+-... +...
T Consensus 169 ~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~l~s~--s~dg~i~~wd~~~~~~~~~--~~~~ 238 (445)
T 2ovr_B 169 DNIIISGSTDR-----TLKVWNAETGECIHTLYGHT-STVRCMHLHEKRVVSG--SRDATLRVWDIETGQCLHV--LMGH 238 (445)
T ss_dssp TTEEEEEETTS-----CEEEEETTTTEEEEEECCCS-SCEEEEEEETTEEEEE--ETTSEEEEEESSSCCEEEE--EECC
T ss_pred CCEEEEEeCCC-----eEEEEECCcCcEEEEECCCC-CcEEEEEecCCEEEEE--eCCCEEEEEECCCCcEEEE--EcCC
Confidence 44666666555 67889998887 3333211 1111111111111111 1234567777766543221 1122
Q ss_pred CCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcce
Q 016877 112 RLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAH 191 (381)
Q Consensus 112 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 191 (381)
.....++..++..++.|+.+ ..+.+||+.+.+-...-.... ..-.++.. ++..++.|+.++ .
T Consensus 239 ~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~---~~v~~~~~-~~~~l~~~~~d~--------~ 300 (445)
T 2ovr_B 239 VAAVRCVQYDGRRVVSGAYD------FMVKVWDPETETCLHTLQGHT---NRVYSLQF-DGIHVVSGSLDT--------S 300 (445)
T ss_dssp SSCEEEEEECSSCEEEEETT------SCEEEEEGGGTEEEEEECCCS---SCEEEEEE-CSSEEEEEETTS--------C
T ss_pred cccEEEEEECCCEEEEEcCC------CEEEEEECCCCcEeEEecCCC---CceEEEEE-CCCEEEEEeCCC--------e
Confidence 22233444577777777764 247788887665332111111 11223333 666666666443 4
Q ss_pred EEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceE-EecCCCCCCccee
Q 016877 192 TFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWR-TEIPIPRGGPHRA 270 (381)
Q Consensus 192 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~-~~~~~p~~~~~~~ 270 (381)
+..||..+.+-... +............++.+++.|+.++ .+..|++ .+.+-. .+...........
T Consensus 301 i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg-----~i~vwd~-------~~~~~~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 301 IRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNADS-----TVKIWDI-------KTGQCLQTLQGPNKHQSAVT 366 (445)
T ss_dssp EEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEETTS-----CEEEEET-------TTCCEEEEECSTTSCSSCEE
T ss_pred EEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCCC-----eEEEEEC-------CCCcEEEEEccCCCCCCCEE
Confidence 78899887653221 1111111222334555666666443 4555653 222211 1111111122234
Q ss_pred EEEeCCEEEEEccCCC
Q 016877 271 CVVVDDRLLVIGGQEG 286 (381)
Q Consensus 271 ~~~~~~~l~v~GG~~~ 286 (381)
++.+++++++.|+.++
T Consensus 367 ~~~~~~~~l~s~~~dg 382 (445)
T 2ovr_B 367 CLQFNKNFVITSSDDG 382 (445)
T ss_dssp EEEECSSEEEEEETTS
T ss_pred EEEECCCEEEEEeCCC
Confidence 5566788888887654
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.21 E-value=0.02 Score=49.47 Aligned_cols=180 Identities=13% Similarity=-0.029 Sum_probs=106.2
Q ss_pred hhheeEcCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEeee-cccccccccCcceEeecCCCCCeE
Q 016877 27 LGFALVADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTK-KDVVPKRILPATFQDLPAPELKWE 103 (381)
Q Consensus 27 ~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W~ 103 (381)
.|+...++.||+..|..+. +.+..+|+++++ ..++-.....+.|+...++ ++.... .+..++.||+.+.+-
T Consensus 46 qGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw--~~~~v~v~D~~t~~~- 119 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW--KNGLGFVWNIRNLRQ- 119 (262)
T ss_dssp EEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES--SSSEEEEEETTTCCE-
T ss_pred ceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe--eCCEEEEEECccCcE-
Confidence 4556668999999985543 368899999998 3343322223444555544 555433 355789999987763
Q ss_pred EccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEec-CCC--CCCCCccceEEEEEeCCEEEEEcCC
Q 016877 104 KMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RFD--MPREMAHSHLGMVTDGRYIYVVTGQ 180 (381)
Q Consensus 104 ~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~--~~~~~~r~~~~~~~~~~~iyv~GG~ 180 (381)
+..++.+-.+.+++.-++.+|+.-| .+.++.+|+++.+-.. +.. .+.|. +.--.+...+++||+--
T Consensus 120 -~~ti~~~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~g~~~-~~lNELe~~~G~lyan~-- 188 (262)
T 3nol_A 120 -VRSFNYDGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAHGEEL-PELNELEWVDGEIFANV-- 188 (262)
T ss_dssp -EEEEECSSCCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEETTEEC-CCEEEEEEETTEEEEEE--
T ss_pred -EEEEECCCCceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccCCccc-cccceeEEECCEEEEEE--
Confidence 3334444455666665667887643 2459999999875433 221 12221 11112445689999642
Q ss_pred CCCCCCCCcceEEEEECCCCc---EEeCCCCCC--------CCcccEEEEE--CCEEEEEcc
Q 016877 181 YGPQCRGPTAHTFVLDTETKK---WQDLPPLPV--------PRYAPATQLW--RGRLHVMGG 229 (381)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~~~~---W~~~~~~p~--------~r~~~~~~~~--~~~lyv~GG 229 (381)
...+++.+.|+++.+ |-.++.+.. .-.-...+.. .+++||.|-
T Consensus 189 ------w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 189 ------WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ------TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ------ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 125789999999976 344443221 1122334443 568888874
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.17 E-value=0.13 Score=46.73 Aligned_cols=213 Identities=18% Similarity=0.219 Sum_probs=112.6
Q ss_pred cceEeecCCCC--CeEEccCCC-------CCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCC
Q 016877 90 ATFQDLPAPEL--KWEKMKAAP-------VPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPR 158 (381)
Q Consensus 90 ~~~~~~~~~~~--~W~~l~~~p-------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~ 158 (381)
..+..+|..+. .|+.-.... ........+..++.||+.... ..+.++|.++.+ |+.-..-..
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~~~~~ 135 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKVAGEA 135 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEECSSCC
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeCCCce
Confidence 36888988765 576533211 111223345568888886531 358999998764 876322111
Q ss_pred CCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCc--EEeCCCCCC--CCcccEEEEECCEEEEEccCCCCC
Q 016877 159 EMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK--WQDLPPLPV--PRYAPATQLWRGRLHVMGGSGENR 234 (381)
Q Consensus 159 ~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~~~~ 234 (381)
....+..++.+|+... ...++.||+++.+ |+.-...+. .+...+.++.++.+|+- ..++
T Consensus 136 -----~~~p~~~~~~v~v~~~---------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g-~~~g-- 198 (376)
T 3q7m_A 136 -----LSRPVVSDGLVLIHTS---------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVG-GDNG-- 198 (376)
T ss_dssp -----CSCCEEETTEEEEECT---------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEEC-CTTT--
T ss_pred -----EcCCEEECCEEEEEcC---------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEE-cCCC--
Confidence 1223456888887532 2468999998765 876443221 12223445567777763 2111
Q ss_pred CCCCccceEeeeecCCccCCceEEecCCCCCC--------cceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceee
Q 016877 235 YTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG--------PHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVV 306 (381)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~--------~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~ 306 (381)
....++ ....+..|+.....|... .....+..++.||+.+ ..+
T Consensus 199 ---~l~~~d-----~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~-~~g-------------------- 249 (376)
T 3q7m_A 199 ---RVSAVL-----MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALA-YNG-------------------- 249 (376)
T ss_dssp ---EEEEEE-----TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEEC-TTS--------------------
T ss_pred ---EEEEEE-----CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEe-cCc--------------------
Confidence 111111 112234677653333211 1123456688888864 221
Q ss_pred cCceeEeC-CC--CCeEEcCCCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCc--eEE
Q 016877 307 YDDVYMLD-DE--MKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV--AVL 377 (381)
Q Consensus 307 ~~~v~~yd-~~--~~W~~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~--W~~ 377 (381)
.++.+| .+ ..|+.-. + . ....+..++.||+..... .++.||+++++ |+.
T Consensus 250 --~l~~~d~~tG~~~w~~~~--~--~---~~~~~~~~~~l~~~~~~g-------------~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 250 --NLTALDLRSGQIMWKREL--G--S---VNDFIVDGNRIYLVDQND-------------RVMALTIDGGVTLWTQ 303 (376)
T ss_dssp --CEEEEETTTCCEEEEECC--C--C---EEEEEEETTEEEEEETTC-------------CEEEEETTTCCEEEEE
T ss_pred --EEEEEECCCCcEEeeccC--C--C---CCCceEECCEEEEEcCCC-------------eEEEEECCCCcEEEee
Confidence 277887 43 3587531 1 1 124567788998875321 37888877655 643
No 30
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.95 E-value=0.062 Score=50.09 Aligned_cols=213 Identities=13% Similarity=0.055 Sum_probs=100.3
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEeeecccccccccCcceEeecCCCCCeEEccCCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p~ 110 (381)
++..++.|+.++ .+..||..+.+ ..+.... ..-..+.. .+.....+ .....+..+|..+.+-.. .+..
T Consensus 142 d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~~h~-~~v~~l~~-~~~~l~sg-~~dg~i~vwd~~~~~~~~--~~~~ 211 (435)
T 1p22_A 142 DDQKIVSGLRDN-----TIKIWDKNTLECKRILTGHT-GSVLCLQY-DERVIITG-SSDSTVRVWDVNTGEMLN--TLIH 211 (435)
T ss_dssp CSSEEEEEESSS-----CEEEEESSSCCEEEEECCCS-SCEEEEEC-CSSEEEEE-ETTSCEEEEESSSCCEEE--EECC
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeEEEEEcCCC-CcEEEEEE-CCCEEEEE-cCCCeEEEEECCCCcEEE--EEcC
Confidence 666777777655 67889988877 3333211 11111111 11111111 123457777777665322 2222
Q ss_pred CCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecC-CCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCc
Q 016877 111 PRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR-FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPT 189 (381)
Q Consensus 111 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 189 (381)
......+....+..++.|+.+ ..+.+||..+.+-... ..+... ...-.++.. ++..++.|+.+
T Consensus 212 h~~~v~~l~~~~~~l~s~s~d------g~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~l~s~~~d-------- 275 (435)
T 1p22_A 212 HCEAVLHLRFNNGMMVTCSKD------RSIAVWDMASPTDITLRRVLVGH-RAAVNVVDF-DDKYIVSASGD-------- 275 (435)
T ss_dssp CCSCEEEEECCTTEEEEEETT------SCEEEEECSSSSCCEEEEEECCC-SSCEEEEEE-ETTEEEEEETT--------
T ss_pred CCCcEEEEEEcCCEEEEeeCC------CcEEEEeCCCCCCceeeeEecCC-CCcEEEEEe-CCCEEEEEeCC--------
Confidence 222233344456677777754 2477888876542210 011110 011223333 44455565533
Q ss_pred ceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCCcce
Q 016877 190 AHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHR 269 (381)
Q Consensus 190 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~ 269 (381)
..+..||..+.+-... +............++.+++.|+.++ .+..|++ .+.+ .+..+.......
T Consensus 276 g~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd~-------~~~~--~~~~~~~h~~~v 339 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDI-------ECGA--CLRVLEGHEELV 339 (435)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTS-----CEEEEET-------TTCC--EEEEECCCSSCE
T ss_pred CeEEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEEC-------CCCC--EEEEEeCCcCcE
Confidence 3578899887643221 1111111223334566777776543 4555653 2221 111111111123
Q ss_pred eEEEeCCEEEEEccCCCC
Q 016877 270 ACVVVDDRLLVIGGQEGD 287 (381)
Q Consensus 270 ~~~~~~~~l~v~GG~~~~ 287 (381)
.++.++++.++.|+.++.
T Consensus 340 ~~~~~~~~~l~sg~~dg~ 357 (435)
T 1p22_A 340 RCIRFDNKRIVSGAYDGK 357 (435)
T ss_dssp EEEECCSSEEEEEETTSC
T ss_pred EEEEecCCEEEEEeCCCc
Confidence 455568888888887643
No 31
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.94 E-value=0.039 Score=49.06 Aligned_cols=98 Identities=8% Similarity=0.006 Sum_probs=45.9
Q ss_pred ceEeecCC--CCCeEEccCCCCCCCCceEEEE-CC-EEEEEecCCCCCCcccceEEEeCCCC-eEecCCCCCCCCccceE
Q 016877 91 TFQDLPAP--ELKWEKMKAAPVPRLDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFTDN-TWGGRFDMPREMAHSHL 165 (381)
Q Consensus 91 ~~~~~~~~--~~~W~~l~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r~~~ 165 (381)
.+..|+.. +.+++.+..++....-..++.. ++ .+|+.+..+ ..+.+||+... +...+...+.. ....
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~--~~~~ 132 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVVEGL--DGCH 132 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEECCC--TTBC
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccccCC--CCce
Confidence 45555544 6677666544433222223322 33 566665322 34777777322 22222212211 1112
Q ss_pred EEEE--eCCEEEEEcCCCCCCCCCCcceEEEEECCC-CcEEe
Q 016877 166 GMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTET-KKWQD 204 (381)
Q Consensus 166 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~-~~W~~ 204 (381)
.++. .++.+|+.+.. ...+.+||..+ .+...
T Consensus 133 ~~~~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 133 SANISPDNRTLWVPALK--------QDRICLFTVSDDGHLVA 166 (343)
T ss_dssp CCEECTTSSEEEEEEGG--------GTEEEEEEECTTSCEEE
T ss_pred EEEECCCCCEEEEecCC--------CCEEEEEEecCCCceee
Confidence 2333 24467776522 24588899887 65543
No 32
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.94 E-value=0.1 Score=46.58 Aligned_cols=132 Identities=11% Similarity=-0.046 Sum_probs=61.5
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT 169 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 169 (381)
..+..+|..+.+-...-..........+..-++..++.|+.+ ..+.+||..+.+-...-.... ..-.+++.
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d------g~v~i~~~~~~~~~~~~~~~~---~~v~~~~~ 172 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV------GKVNIFGVESGKKEYSLDTRG---KFILSIAY 172 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT------SEEEEEETTTCSEEEEEECSS---SCEEEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC------CcEEEEEcCCCceeEEecCCC---ceEEEEEE
Confidence 356677776654322111111111112222355677777654 347788887664322111111 11223333
Q ss_pred -eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 170 -DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 170 -~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
-+++.++.|+.++ .+..||..+.+-...-... ...-.+++. -++++++.|+.++ .+..|++
T Consensus 173 spdg~~lasg~~dg--------~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spd~~~l~s~s~dg-----~i~iwd~ 235 (321)
T 3ow8_A 173 SPDGKYLASGAIDG--------IINIFDIATGKLLHTLEGH-AMPIRSLTFSPDSQLLVTASDDG-----YIKIYDV 235 (321)
T ss_dssp CTTSSEEEEEETTS--------CEEEEETTTTEEEEEECCC-SSCCCEEEECTTSCEEEEECTTS-----CEEEEET
T ss_pred CCCCCEEEEEcCCC--------eEEEEECCCCcEEEEEccc-CCceeEEEEcCCCCEEEEEcCCC-----eEEEEEC
Confidence 3556667776543 3788998876532211111 111122333 3567777776543 3556653
No 33
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.89 E-value=0.23 Score=46.38 Aligned_cols=266 Identities=10% Similarity=0.046 Sum_probs=120.0
Q ss_pred EcCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEeeecccccccccCcceEeecCCCCCeEEccCCC
Q 016877 32 VADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
.++.+.+.|+.++ .+..||..+.+ ..+.. +...-..+....+..... ......+..+|..+.+-.. .+.
T Consensus 130 ~~~~~l~sgs~dg-----~i~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~~~l~s-~s~dg~i~vwd~~~~~~~~--~~~ 200 (464)
T 3v7d_B 130 FEDNYVITGADDK-----MIRVYDSINKKFLLQLSG-HDGGVWALKYAHGGILVS-GSTDRTVRVWDIKKGCCTH--VFE 200 (464)
T ss_dssp EETTEEEEEETTS-----CEEEEETTTTEEEEEECC-CSSCEEEEEECSTTEEEE-EETTSCEEEEETTTTEEEE--EEC
T ss_pred ECCCEEEEEcCCC-----cEEEEECCCCcEEEEEeC-CCcCEEEEEEcCCCEEEE-EeCCCCEEEEECCCCcEEE--EEC
Confidence 3556667776555 67889988887 33432 111111111111111111 1123356677776654322 121
Q ss_pred CCCCCc-eEEEE---CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCC---------------------CCCCCccce
Q 016877 110 VPRLDG-AAIQI---KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD---------------------MPREMAHSH 164 (381)
Q Consensus 110 ~~r~~~-~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~---------------------~~~~~~r~~ 164 (381)
...... ++... ++..++.|+.++ .+.++|..+.+-..... +.. ....
T Consensus 201 ~h~~~v~~l~~~~~~~~~~l~s~s~d~------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 272 (464)
T 3v7d_B 201 GHNSTVRCLDIVEYKNIKYIVTGSRDN------TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG--HMAS 272 (464)
T ss_dssp CCSSCEEEEEEEESSSCEEEEEEETTS------CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC--CSSC
T ss_pred CCCCccEEEEEecCCCCCEEEEEcCCC------cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC--ccce
Confidence 111111 12222 447777777653 46677776554221100 000 0111
Q ss_pred EEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CCEEEEEccCCCCCCCCCccceE
Q 016877 165 LGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWS 243 (381)
Q Consensus 165 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~ 243 (381)
......++.+++.|+.++ .+..||..+.+-...-... ...-.+++.. ++..++.|+.++ .+..|+
T Consensus 273 v~~~~~~~~~l~~~~~d~--------~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd 338 (464)
T 3v7d_B 273 VRTVSGHGNIVVSGSYDN--------TLIVWDVAQMKCLYILSGH-TDRIYSTIYDHERKRCISASMDT-----TIRIWD 338 (464)
T ss_dssp EEEEEEETTEEEEEETTS--------CEEEEETTTTEEEEEECCC-SSCEEEEEEETTTTEEEEEETTS-----CEEEEE
T ss_pred EEEEcCCCCEEEEEeCCC--------eEEEEECCCCcEEEEecCC-CCCEEEEEEcCCCCEEEEEeCCC-----cEEEEE
Confidence 112233344555665433 4788998876532221111 1122233333 456666766543 455565
Q ss_pred eeeecCCccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEc
Q 016877 244 LAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVL 322 (381)
Q Consensus 244 ~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i 322 (381)
+ .+.+ .+..+........++.+.++.++.|+.++. +..|| .+..-...
T Consensus 339 ~-------~~~~--~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~----------------------v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 339 L-------ENGE--LMYTLQGHTALVGLLRLSDKFLVSAAADGS----------------------IRGWDANDYSRKFS 387 (464)
T ss_dssp T-------TTTE--EEEEECCCSSCEEEEEECSSEEEEEETTSE----------------------EEEEETTTCCEEEE
T ss_pred C-------CCCc--EEEEEeCCCCcEEEEEEcCCEEEEEeCCCc----------------------EEEEECCCCceeee
Confidence 3 2222 221122112223455566777777776542 55665 33221111
Q ss_pred CCCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCce
Q 016877 323 PSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVA 375 (381)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W 375 (381)
..... .....+...++.+++.|+ ++ .+.+||.++++-
T Consensus 388 --~~~~~-~~~~~~~~~~~~~l~~~~-dg------------~i~iwd~~~g~~ 424 (464)
T 3v7d_B 388 --YHHTN-LSAITTFYVSDNILVSGS-EN------------QFNIYNLRSGKL 424 (464)
T ss_dssp --EECTT-CCCEEEEEECSSEEEEEE-TT------------EEEEEETTTCCE
T ss_pred --ecCCC-CccEEEEEeCCCEEEEec-CC------------eEEEEECCCCcE
Confidence 11111 112334667788888776 31 378888877653
No 34
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.84 E-value=0.014 Score=50.44 Aligned_cols=111 Identities=15% Similarity=0.159 Sum_probs=67.5
Q ss_pred CCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCC
Q 016877 153 RFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGE 232 (381)
Q Consensus 153 ~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~ 232 (381)
+...|....-+..++...++.+|+..|..+ .+.+.++|+++.+=...-+++..-....++..+++||+....++
T Consensus 34 v~~~phd~~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~ 107 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYRNGYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEECCTTCEEEEEEEETTEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSS
T ss_pred EEEecCCCCcccceEEEECCEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCC
Confidence 333444323344566677999999988665 46789999999876554456554455667888999999965332
Q ss_pred CCCCCCccceEeeeecCCccCCceEEecCCCCCCcceeEEEeCCEEEEEcc
Q 016877 233 NRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGG 283 (381)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG 283 (381)
....| |+.+.+-.. ..+....+.+++.-+++||+.-|
T Consensus 108 -----~v~v~-------D~~t~~~~~--ti~~~~eG~glt~dg~~L~~SdG 144 (262)
T 3nol_A 108 -----LGFVW-------NIRNLRQVR--SFNYDGEGWGLTHNDQYLIMSDG 144 (262)
T ss_dssp -----EEEEE-------ETTTCCEEE--EEECSSCCCCEEECSSCEEECCS
T ss_pred -----EEEEE-------ECccCcEEE--EEECCCCceEEecCCCEEEEECC
Confidence 22222 244433322 22222233466667778888765
No 35
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.84 E-value=0.11 Score=47.96 Aligned_cols=152 Identities=7% Similarity=-0.033 Sum_probs=73.2
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eee-cC---CCCCCC-ceeEEe--eecccccccccCcceEeecCCCCCeEE
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IIL-PN---NGPQKG-ENIGVK--TKKDVVPKRILPATFQDLPAPELKWEK 104 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~-p~---~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~ 104 (381)
++.+++.++.++ .+..||+.+++ ... +. ..+... .++... +.....+ .....+..+|..+.+...
T Consensus 133 ~~~~~~~~~~~~-----~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~--~~d~~v~~~d~~~~~~~~ 205 (433)
T 3bws_A 133 NTRLAIPLLEDE-----GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQ--MQANAVHVFDLKTLAYKA 205 (433)
T ss_dssp SSEEEEEBTTSS-----SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEE--GGGTEEEEEETTTCCEEE
T ss_pred CCeEEEEeCCCC-----eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEE--CCCCEEEEEECCCceEEE
Confidence 678888876443 57899998887 332 22 111111 111111 1111111 123467788877655332
Q ss_pred ccCCCCCCCCc-eEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCC
Q 016877 105 MKAAPVPRLDG-AAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQ 180 (381)
Q Consensus 105 l~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~ 180 (381)
.-. ...... .++.. +..+|+.+..+ ..+.+||+.+.+....-.... ...+++.. +++.+++++.
T Consensus 206 ~~~--~~~~~~~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 206 TVD--LTGKWSKILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRKTDKIG----LPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEE--CSSSSEEEEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEECCCCS----EEEEEEECTTSSEEEEEEE
T ss_pred EEc--CCCCCeeEEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEEecCCC----CceEEEEcCCCCEEEEEEC
Confidence 211 111112 22222 34677776543 358899998887654322221 12334432 3433334433
Q ss_pred CCCCCCCCcceEEEEECCCCcEE
Q 016877 181 YGPQCRGPTAHTFVLDTETKKWQ 203 (381)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~~~~W~ 203 (381)
...........+..||+.+.+-.
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEE
T ss_pred CCCccccCCCeEEEEECCCCcEE
Confidence 22111001357889999887543
No 36
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.022 Score=57.56 Aligned_cols=95 Identities=8% Similarity=0.010 Sum_probs=54.0
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE--C--CEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--K--NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 166 (381)
.+..+|....++..+..+........++.+ + +..++.|+.++ .+.++|..+++|..+..+.... ..-.+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg------~I~vwd~~~~~~~~~~~~~~h~-~~V~~ 104 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGRWSQIAVHAVHS-ASVNS 104 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS------CEEEEEEETTEEEEEEEECCCS-SCEEE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC------eEEEEECCCCcccccccccCCC-CCeEE
Confidence 566677666666555544433333333333 3 56777777642 4788899888877655443311 22233
Q ss_pred EEEe-C--CEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 167 MVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 167 ~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
++.. + +.+++.|+.+ ..+..||..+.
T Consensus 105 v~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~ 133 (753)
T 3jro_A 105 VQWAPHEYGPLLLVASSD--------GKVSVVEFKEN 133 (753)
T ss_dssp EEECCGGGCSEEEEEETT--------SEEEEEECCSS
T ss_pred EEECCCCCCCEEEEEeCC--------CcEEEEEeecC
Confidence 3333 2 5567777643 34778888765
No 37
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.70 E-value=0.065 Score=48.21 Aligned_cols=128 Identities=10% Similarity=0.069 Sum_probs=62.3
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceE-EEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAA-IQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~-~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
..+..||..+.++..+..+........+ +.. ++.+++.|+.+ ..+.+||..+.++.....+... ...-.++
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~-~~~v~~~ 102 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGRTWKPTLVILRI-NRAARCV 102 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETTEEEEEEECCCC-SSCEEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCCeeeeeEEeecC-CCceeEE
Confidence 3577778777766555544333322222 222 55667777654 2478889888877654322221 1122233
Q ss_pred EEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCc-EEeCCCC--CCCCcccEEEEE-CCEEEEEccCCC
Q 016877 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK-WQDLPPL--PVPRYAPATQLW-RGRLHVMGGSGE 232 (381)
Q Consensus 168 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~--p~~r~~~~~~~~-~~~lyv~GG~~~ 232 (381)
+.. ++..++.|+.++ .+..||..+.. |...... +....-.+++.. ++++++.|+.++
T Consensus 103 ~~~~~~~~l~~~~~d~--------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 103 RWAPNEKKFAVGSGSR--------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EECTTSSEEEEEETTS--------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCCEEEEEeCCC--------EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 332 455666666443 25555554433 3222211 112222233332 556777776543
No 38
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.16 Score=44.30 Aligned_cols=27 Identities=26% Similarity=0.102 Sum_probs=18.9
Q ss_pred heeEcCEEEEecCCCCCcccceeeeeeCCCce
Q 016877 29 FALVADFFWASSSKFTSSYLNIASNWSPYHNS 60 (381)
Q Consensus 29 ~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (381)
++..++..++.|+.++ .+..||..+..
T Consensus 24 ~~~~~~~~l~s~~~dg-----~v~vw~~~~~~ 50 (313)
T 3odt_A 24 VVAVDDSKVASVSRDG-----TVRLWSKDDQW 50 (313)
T ss_dssp EEEEETTEEEEEETTS-----EEEEEEESSSE
T ss_pred EEecCCCEEEEEEcCC-----cEEEEECCCCE
Confidence 3445676777877665 67888887776
No 39
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.66 E-value=0.3 Score=45.53 Aligned_cols=133 Identities=10% Similarity=0.069 Sum_probs=64.6
Q ss_pred EECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 119 QIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 119 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
..++.+++.|+.+ ..+.+||..+.+-...-.... ..-.+++. .++..++.|+.++ .+..||.
T Consensus 277 ~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~sg~~dg--------~i~vwd~ 339 (464)
T 3v7d_B 277 SGHGNIVVSGSYD------NTLIVWDVAQMKCLYILSGHT---DRIYSTIYDHERKRCISASMDT--------TIRIWDL 339 (464)
T ss_dssp EEETTEEEEEETT------SCEEEEETTTTEEEEEECCCS---SCEEEEEEETTTTEEEEEETTS--------CEEEEET
T ss_pred cCCCCEEEEEeCC------CeEEEEECCCCcEEEEecCCC---CCEEEEEEcCCCCEEEEEeCCC--------cEEEEEC
Confidence 3345566667654 248889988765433211111 11223333 3445666666443 4788998
Q ss_pred CCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCCcceeEEEeCCE
Q 016877 198 ETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDR 277 (381)
Q Consensus 198 ~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ 277 (381)
.+.+-.. .+......-......+..++.|+.++ .+..|++. .....+... ........+...+++
T Consensus 340 ~~~~~~~--~~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~-----~~~~~~~~~---~~~~~~~~~~~~~~~ 404 (464)
T 3v7d_B 340 ENGELMY--TLQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDAN-----DYSRKFSYH---HTNLSAITTFYVSDN 404 (464)
T ss_dssp TTTEEEE--EECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETT-----TCCEEEEEE---CTTCCCEEEEEECSS
T ss_pred CCCcEEE--EEeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECC-----CCceeeeec---CCCCccEEEEEeCCC
Confidence 8765322 22211222233345567777776543 45566532 111122211 111122234556777
Q ss_pred EEEEcc
Q 016877 278 LLVIGG 283 (381)
Q Consensus 278 l~v~GG 283 (381)
+++.|+
T Consensus 405 ~l~~~~ 410 (464)
T 3v7d_B 405 ILVSGS 410 (464)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 777776
No 40
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.55 E-value=0.05 Score=47.12 Aligned_cols=148 Identities=8% Similarity=-0.043 Sum_probs=93.6
Q ss_pred hhheeEcCEEEEecCCCCCcccceeeeeeCCCce--eee-cCCCCCCCceeEEeee-cccccccccCcceEeecCCCCCe
Q 016877 27 LGFALVADFFWASSSKFTSSYLNIASNWSPYHNS--IIL-PNNGPQKGENIGVKTK-KDVVPKRILPATFQDLPAPELKW 102 (381)
Q Consensus 27 ~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~-p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W 102 (381)
+|+...++.||+..|..+ .+..+|+++++ ..+ ++ ...+.|+...++ ++.... .+..++.||+.+.+-
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~l~~--~~FgeGit~~g~~Ly~ltw--~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWMERLG--NIFAEGLASDGERLYQLTW--TEGLLFTWSGMPPQR 128 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEEECT--TCCEEEEEECSSCEEEEES--SSCEEEEEETTTTEE
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEECCC--CcceeEEEEeCCEEEEEEc--cCCEEEEEECCcCcE
Confidence 566777899999999655 38899999998 333 32 112334555544 555433 356788999987653
Q ss_pred EEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEec-CC--CCCCCCccceEEEEEeCCEEEEEcC
Q 016877 103 EKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RF--DMPREMAHSHLGMVTDGRYIYVVTG 179 (381)
Q Consensus 103 ~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~--~~~~~~~r~~~~~~~~~~~iyv~GG 179 (381)
+..++.+-.+.+++.-++++|+.-| .+.+..+|+++.+-.. +. .-+.+. ..-..+...+++||+--
T Consensus 129 --~~ti~~~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~g~~v-~~lNeLe~~dG~lyanv- 197 (268)
T 3nok_A 129 --ERTTRYSGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLRGQPV-ELINELECANGVIYANI- 197 (268)
T ss_dssp --EEEEECSSCCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEETTEEC-CCEEEEEEETTEEEEEE-
T ss_pred --EEEEeCCCceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCCCccc-ccccccEEeCCEEEEEE-
Confidence 3334444455667777889998754 2469999999876443 21 122221 11223455688999642
Q ss_pred CCCCCCCCCcceEEEEECCCCc
Q 016877 180 QYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 180 ~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
...+++.+.|+++.+
T Consensus 198 -------w~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 198 -------WHSSDVLEIDPATGT 212 (268)
T ss_dssp -------TTCSEEEEECTTTCB
T ss_pred -------CCCCeEEEEeCCCCc
Confidence 115789999999876
No 41
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.50 E-value=0.07 Score=46.43 Aligned_cols=168 Identities=12% Similarity=0.030 Sum_probs=90.3
Q ss_pred ecCCCCCCCCccceEEEEEeC-CEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEcc
Q 016877 151 GGRFDMPREMAHSHLGMVTDG-RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGG 229 (381)
Q Consensus 151 ~~~~~~~~~~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 229 (381)
+.+...|.+...+.++++..+ +.+|+..|..+ .+.+..+|+++.+=...-+++.......++..+++||+..-
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~ 83 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYG------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW 83 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTT------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCC------CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe
Confidence 334444443222346677766 89999877433 36799999999875443344443444567778999999964
Q ss_pred CCCCCCCCCccceEeeeecCCccCCceEEecCCCCC-CcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecC
Q 016877 230 SGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRG-GPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYD 308 (381)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~-~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (381)
.++ ....+ |+.+.+ .+..+|.+ ..+.+.+.-++++|+..|. +
T Consensus 84 ~~~-----~v~vi-------D~~t~~--v~~~i~~g~~~g~glt~Dg~~l~vs~gs-----------------------~ 126 (266)
T 2iwa_A 84 LKN-----IGFIY-------DRRTLS--NIKNFTHQMKDGWGLATDGKILYGSDGT-----------------------S 126 (266)
T ss_dssp TCS-----EEEEE-------ETTTTE--EEEEEECCSSSCCEEEECSSSEEEECSS-----------------------S
T ss_pred cCC-----EEEEE-------ECCCCc--EEEEEECCCCCeEEEEECCCEEEEECCC-----------------------C
Confidence 322 22222 233332 22222111 2233455567789987642 2
Q ss_pred ceeEeC-CCCC-eEEcC--CCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCc
Q 016877 309 DVYMLD-DEMK-WKVLP--SMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (381)
Q Consensus 309 ~v~~yd-~~~~-W~~i~--~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 374 (381)
.++.+| .+.+ -..++ .-+.+..... .+...+++||+--... ++|.+.|+++++
T Consensus 127 ~l~viD~~t~~v~~~I~Vg~~~~p~~~~n-ele~~dg~lyvn~~~~------------~~V~vID~~tg~ 183 (266)
T 2iwa_A 127 ILYEIDPHTFKLIKKHNVKYNGHRVIRLN-ELEYINGEVWANIWQT------------DCIARISAKDGT 183 (266)
T ss_dssp EEEEECTTTCCEEEEEECEETTEECCCEE-EEEEETTEEEEEETTS------------SEEEEEETTTCC
T ss_pred eEEEEECCCCcEEEEEEECCCCcccccce-eEEEECCEEEEecCCC------------CeEEEEECCCCc
Confidence 488887 5543 22221 1111111111 2334488888663221 358888887764
No 42
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.44 E-value=0.081 Score=47.57 Aligned_cols=104 Identities=13% Similarity=0.188 Sum_probs=56.8
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++.++++|+.+ ..+.+||..+.+|..+..+.... ..-.+++.. ++.+++.|+.++ .+..||.++
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~dg--------~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEHN-GQVTGVDWAPDSNRIVTCGTDR--------NAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEEECCS-SCEEEEEEETTTTEEEEEETTS--------CEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCCC-CcccEEEEeCCCCEEEEEcCCC--------eEEEEECCC
Confidence 45677777653 35888999988776654443211 112233333 455666666433 477888888
Q ss_pred CcEEeCCCCC-CCCcccEEEEE-CCEEEEEccCCCCCCCCCccceEe
Q 016877 200 KKWQDLPPLP-VPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 200 ~~W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
.++.....+. ....-.++... ++++++.|+.++ .+..|++
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~ 125 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR-----VISICYF 125 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEe
Confidence 8765543222 22222233332 556777766443 4556665
No 43
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.39 E-value=0.11 Score=45.27 Aligned_cols=152 Identities=10% Similarity=-0.046 Sum_probs=91.8
Q ss_pred hhheeEc-CEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEeee-cccccccccCcceEeecCCCCCe
Q 016877 27 LGFALVA-DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTK-KDVVPKRILPATFQDLPAPELKW 102 (381)
Q Consensus 27 ~~~~~~~-~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W 102 (381)
||+++-. +.||+..|..+. +.+..+|+.+++ ..++........++...++ .+.... .+..+..+|+.+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~---s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~--~~~~v~viD~~t~~- 97 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGR---SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW--LKNIGFIYDRRTLS- 97 (266)
T ss_dssp EEEEECSTTEEEEEECSTTT---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET--TCSEEEEEETTTTE-
T ss_pred ccEEEeCCCeEEEECCCCCC---CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe--cCCEEEEEECCCCc-
Confidence 6677766 899999874332 478999999998 4444322233445555544 444433 45678899988654
Q ss_pred EEccCCCCC-CCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEec-CC--CCCCCCccceEEEEEeCCEEEEEc
Q 016877 103 EKMKAAPVP-RLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RF--DMPREMAHSHLGMVTDGRYIYVVT 178 (381)
Q Consensus 103 ~~l~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~--~~~~~~~r~~~~~~~~~~~iyv~G 178 (381)
.+..++.+ ..+.+++.-++++|+.-| .+.+..+|+++.+-.. ++ ..+.|..+ ...+...++++|+--
T Consensus 98 -v~~~i~~g~~~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~-~nele~~dg~lyvn~ 168 (266)
T 2iwa_A 98 -NIKNFTHQMKDGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYNGHRVIR-LNELEYINGEVWANI 168 (266)
T ss_dssp -EEEEEECCSSSCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCC-EEEEEEETTEEEEEE
T ss_pred -EEEEEECCCCCeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCCCccccc-ceeEEEECCEEEEec
Confidence 33333333 333444444568888643 2469999999875433 22 11222211 223444588999763
Q ss_pred CCCCCCCCCCcceEEEEECCCCc
Q 016877 179 GQYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
. ..+++.+.|+++.+
T Consensus 169 ~--------~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 169 W--------QTDCIARISAKDGT 183 (266)
T ss_dssp T--------TSSEEEEEETTTCC
T ss_pred C--------CCCeEEEEECCCCc
Confidence 2 14789999999876
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.37 E-value=0.25 Score=45.34 Aligned_cols=92 Identities=4% Similarity=-0.065 Sum_probs=47.8
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~ 167 (381)
..+..+|..+.+.... +........+...++.+++.|+.+ ..+.++|..... -..+..... .-.++
T Consensus 156 g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~----~v~~~ 223 (401)
T 4aez_A 156 GLVDIYDVESQTKLRT--MAGHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQGHSS----EVCGL 223 (401)
T ss_dssp SCEEEEETTTCCEEEE--ECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSS----CEEEE
T ss_pred CeEEEEECcCCeEEEE--ecCCCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcCCCC----CeeEE
Confidence 3567777766653222 222222333444566777777764 357788887432 111211111 11223
Q ss_pred EEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCc
Q 016877 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 168 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
+.. ++.+++.|+.++ .+..||..+.+
T Consensus 224 ~~~~~~~~l~s~~~d~--------~v~iwd~~~~~ 250 (401)
T 4aez_A 224 AWRSDGLQLASGGNDN--------VVQIWDARSSI 250 (401)
T ss_dssp EECTTSSEEEEEETTS--------CEEEEETTCSS
T ss_pred EEcCCCCEEEEEeCCC--------eEEEccCCCCC
Confidence 332 556677776443 47889988754
No 45
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.30 E-value=0.47 Score=42.34 Aligned_cols=100 Identities=9% Similarity=0.046 Sum_probs=49.0
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++. ++.|+.+ ..+.++|+.+.+-...-.-.. ..-.+++. -++.+++.|+.++ .+..||..+
T Consensus 154 ~~~-l~s~s~d------~~i~~wd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~sg~~d~--------~v~~wd~~~ 215 (340)
T 1got_B 154 DNQ-IVTSSGD------TTCALWDIETGQQTTTFTGHT---GDVMSLSLAPDTRLFVSGACDA--------SAKLWDVRE 215 (340)
T ss_dssp TTE-EEEEETT------SCEEEEETTTTEEEEEECCCS---SCEEEEEECTTSSEEEEEETTS--------CEEEEETTT
T ss_pred CCc-EEEEECC------CcEEEEECCCCcEEEEEcCCC---CceEEEEECCCCCEEEEEeCCC--------cEEEEECCC
Confidence 455 4555543 347888988776443211111 11223333 3456777776544 377888877
Q ss_pred CcEEeCCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 200 KKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
.+-...-.. ....-.+++. -++++++.|+.++ .+..|++
T Consensus 216 ~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~d~-----~v~iwd~ 255 (340)
T 1got_B 216 GMCRQTFTG-HESDINAICFFPNGNAFATGSDDA-----TCRLFDL 255 (340)
T ss_dssp CSEEEEECC-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CeeEEEEcC-CcCCEEEEEEcCCCCEEEEEcCCC-----cEEEEEC
Confidence 543221111 1111122222 2566777777543 4556653
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.30 E-value=0.059 Score=47.80 Aligned_cols=22 Identities=14% Similarity=0.077 Sum_probs=14.8
Q ss_pred CEEEEecCCCCCcccceeeeeeCCCce
Q 016877 34 DFFWASSSKFTSSYLNIASNWSPYHNS 60 (381)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (381)
+.+.+.||.++ .+-.||+.+..
T Consensus 51 ~~~l~S~s~D~-----~i~vWd~~~~~ 72 (340)
T 4aow_A 51 PDMILSASRDK-----TIIMWKLTRDE 72 (340)
T ss_dssp TTEEEEEETTS-----CEEEEEECCSS
T ss_pred CCEEEEEcCCC-----eEEEEECCCCC
Confidence 46777887666 56777776544
No 47
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.29 E-value=0.35 Score=42.28 Aligned_cols=64 Identities=13% Similarity=0.141 Sum_probs=35.1
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeC---CEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDG---RYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
+.+++.|+.+ ..+.++|..+.+|..+..+... ...-.+++... +.+++.|+.++ .+..||..
T Consensus 67 g~~l~s~s~D------~~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d~--------~v~~wd~~ 131 (297)
T 2pm7_B 67 GTILASCSYD------GKVMIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPMLLVASSDG--------KVSVVEFK 131 (297)
T ss_dssp CSEEEEEETT------TEEEEEEBSSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETTS--------EEEEEEBC
T ss_pred CCEEEEEcCC------CEEEEEEcCCCceEEEEEeecC-CCceeEEEeCcCCCCcEEEEEECCC--------cEEEEEec
Confidence 5677777765 2477889888877665433221 01122333332 45666665433 46667766
Q ss_pred CC
Q 016877 199 TK 200 (381)
Q Consensus 199 ~~ 200 (381)
+.
T Consensus 132 ~~ 133 (297)
T 2pm7_B 132 EN 133 (297)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 48
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.23 E-value=0.091 Score=47.07 Aligned_cols=101 Identities=8% Similarity=0.030 Sum_probs=47.8
Q ss_pred cceEeecCCCCCeEEccCCCCC--CCCceEEEECC-EEEEEecCCCCCCcccceEEEeCC-CCeEecCCCCC----CCC-
Q 016877 90 ATFQDLPAPELKWEKMKAAPVP--RLDGAAIQIKN-LLYVFAGYGSIDYVHSHVDIYNFT-DNTWGGRFDMP----REM- 160 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~--r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~~----~~~- 160 (381)
..+..|+..+.+++.+..+... +....+..-++ .||+.+..+ ..+.+||+. ..+...+..++ .|.
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK------GTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT------TEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC------CEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 4677788776666665542211 11222223344 577665321 246677764 22333221111 010
Q ss_pred ---ccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECC-CCcEEe
Q 016877 161 ---AHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTE-TKKWQD 204 (381)
Q Consensus 161 ---~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~-~~~W~~ 204 (381)
....+.++. -++++|+.+.. .+.+.+||.. +.+...
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~~--------~~~v~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDLG--------SDKVYVYNVSDAGQLSE 177 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEETT--------TTEEEEEEECTTSCEEE
T ss_pred cccCCCceEEEECCCCcEEEEeCC--------CCEEEEEEECCCCcEEE
Confidence 011233443 35567776431 2468888887 555544
No 49
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.19 E-value=0.27 Score=43.09 Aligned_cols=99 Identities=15% Similarity=0.123 Sum_probs=48.7
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++.+++.|+.+ ..+.+||..+.+-... +... ...-.++.. -++.+++.|+.++ .+..||..+
T Consensus 76 ~~~~l~s~~~d------~~i~vwd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~ 138 (312)
T 4ery_A 76 DSNLLVSASDD------KTLKIWDVSSGKCLKT--LKGH-SNYVFCCNFNPQSNLIVSGSFDE--------SVRIWDVKT 138 (312)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCEEEE--EECC-SSCEEEEEECSSSSEEEEEETTS--------CEEEEETTT
T ss_pred CCCEEEEECCC------CEEEEEECCCCcEEEE--EcCC-CCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCC
Confidence 45677777754 3578889887653321 1110 011122222 2445666666543 378889887
Q ss_pred CcEEeCCCCCCCC-cccEEEE-ECCEEEEEccCCCCCCCCCccceE
Q 016877 200 KKWQDLPPLPVPR-YAPATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (381)
Q Consensus 200 ~~W~~~~~~p~~r-~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~ 243 (381)
.+-... ++... .-.+++. -++++++.|+.++ .+..|+
T Consensus 139 ~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd 177 (312)
T 4ery_A 139 GKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWD 177 (312)
T ss_dssp CCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEE
Confidence 653221 11111 1112222 2556777776543 355555
No 50
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.19 E-value=0.085 Score=47.46 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=52.3
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-C--CEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
++..++.|+.++ .+.+||...+++..+..+... ...-.+++.. + +.+++.|+.++ .+..||.
T Consensus 22 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~dg--------~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSSDK------TIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDG--------KVLIWKE 86 (379)
T ss_dssp SSSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEECCC------cEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCCCEEEEeccCC--------EEEEEEc
Confidence 455667776542 477788876676665444321 1112233332 2 55666766543 3788899
Q ss_pred CCCcEEeCCCCCCC-CcccEEEEE-C--CEEEEEccCC
Q 016877 198 ETKKWQDLPPLPVP-RYAPATQLW-R--GRLHVMGGSG 231 (381)
Q Consensus 198 ~~~~W~~~~~~p~~-r~~~~~~~~-~--~~lyv~GG~~ 231 (381)
.+.+|..+..+... ..-.+++.. + +.+++.|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 88887766544322 222233332 2 5567776654
No 51
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.23 Score=45.29 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=31.5
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
+..+++|+.+ ..+.+||..+.+-...-.... ..-.+++. .++.+++.|+.++ .+..||..+.
T Consensus 217 ~~~~~~~~~~------g~i~~~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~d~--------~i~i~d~~~~ 279 (425)
T 1r5m_A 217 DDKFVIPGPK------GAIFVYQITEKTPTGKLIGHH---GPISVLEFNDTNKLLLSASDDG--------TLRIWHGGNG 279 (425)
T ss_dssp TTEEEEECGG------GCEEEEETTCSSCSEEECCCS---SCEEEEEEETTTTEEEEEETTS--------CEEEECSSSB
T ss_pred CCEEEEEcCC------CeEEEEEcCCCceeeeeccCC---CceEEEEECCCCCEEEEEcCCC--------EEEEEECCCC
Confidence 3345666543 358889988753222111111 11123333 3455666665433 3778887764
Q ss_pred c
Q 016877 201 K 201 (381)
Q Consensus 201 ~ 201 (381)
+
T Consensus 280 ~ 280 (425)
T 1r5m_A 280 N 280 (425)
T ss_dssp S
T ss_pred c
Confidence 3
No 52
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.04 E-value=0.12 Score=46.46 Aligned_cols=184 Identities=11% Similarity=0.098 Sum_probs=87.8
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++.+++.||.++ .+.++|..+++|.....+.......-.+++. -+++.++.|+.++ .+..+|..+
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--------~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--------TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEECC
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC--------cEEEEEccC
Confidence 567777887653 4777888888775432211110112223333 2456677776544 356677766
Q ss_pred CcEEeCCCCCC-CCcccEEEEE-CCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCCcceeEEEe--C
Q 016877 200 KKWQDLPPLPV-PRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVV--D 275 (381)
Q Consensus 200 ~~W~~~~~~p~-~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~--~ 275 (381)
..+..+..+.. ...-.+++.. ++++++.|+.++ .+..|++. ....+..+..+.........+.+ +
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~------~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVD------EEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEEC------TTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECC------CCCCeEEEEEecCcCCCeEEEEECCC
Confidence 66554433321 1111222222 566777777543 46667652 12223322222111111122222 5
Q ss_pred CEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceEEEEECCEEEEEccccc
Q 016877 276 DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTE 351 (381)
Q Consensus 276 ~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~ 351 (381)
+++++.|+.++. +..|| .+..|..+..+..........+...++++++.|+.++
T Consensus 162 ~~~l~s~s~d~~----------------------i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 162 QELLASASYDDT----------------------VKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp SSCEEEEETTSC----------------------EEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCEEEEEeCCCc----------------------EEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 667777776543 55565 5666654433322112211112223567777777653
No 53
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.02 E-value=0.16 Score=43.65 Aligned_cols=240 Identities=7% Similarity=-0.076 Sum_probs=111.6
Q ss_pred ccCcceEeecCCCCCeEEccCCCCCCCCceEEE-ECCEEEEEecCCCCCCcccceEEEeCCC-CeEecCCCCCCCCccce
Q 016877 87 ILPATFQDLPAPELKWEKMKAAPVPRLDGAAIQ-IKNLLYVFAGYGSIDYVHSHVDIYNFTD-NTWGGRFDMPREMAHSH 164 (381)
Q Consensus 87 ~~~~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~~~r~~ 164 (381)
.....++.+|..+.+...+...+ ..-.++.. -+++.+++++. ..++++|+.+ .+...+...+.. ....
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~-~~~~ 88 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTP--ELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPSPEKVDTGFAT-ICNN 88 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEES--SCCEEEEECTTSSEEEEEET-------TEEEEEESSSCCSCEECCCTTCC-CBCS
T ss_pred CcceeEEEEeCCCCceeeeccCC--cceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCCceEecccccc-cccc
Confidence 34457888888887765544321 11122222 24555555541 3589999998 776665433311 1111
Q ss_pred EEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CCE-EEEEccCCCCCCCCCccce
Q 016877 165 LGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGR-LHVMGGSGENRYTPEVDHW 242 (381)
Q Consensus 165 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~ 242 (381)
.....-+++.+++++..... ...++.+|..+..-..+..... ...+... +++ |++.+..+. ....|
T Consensus 89 ~~~~spdg~~l~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~-----~~~l~ 156 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFG----KSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ-----VFDIY 156 (297)
T ss_dssp CCEECTTSSEEEEEECTTTS----SCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT-----EEEEE
T ss_pred ceEECCCCCEEEEEEeCCCC----cceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC-----ceEEE
Confidence 11222345555555432221 4679999988877555543321 2222222 344 544443221 23444
Q ss_pred EeeeecCCccCCceEEecCCCCCCcceeEE-EeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeE
Q 016877 243 SLAVKDGKPLEKEWRTEIPIPRGGPHRACV-VVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWK 320 (381)
Q Consensus 243 ~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~ 320 (381)
.+ +..+.+...+...+... ..++ .-+++.+++.+.... ...+|.++ ......
T Consensus 157 ~~-----~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~~-------------------~~~i~~~~~~~~~~~ 210 (297)
T 2ojh_A 157 SM-----DIDSGVETRLTHGEGRN--DGPDYSPDGRWIYFNSSRTG-------------------QMQIWRVRVDGSSVE 210 (297)
T ss_dssp EE-----ETTTCCEEECCCSSSCE--EEEEECTTSSEEEEEECTTS-------------------SCEEEEEETTSSCEE
T ss_pred EE-----ECCCCcceEcccCCCcc--ccceECCCCCEEEEEecCCC-------------------CccEEEECCCCCCcE
Confidence 43 24444444443322211 1222 225554444432211 23578887 555555
Q ss_pred EcCCCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCceEEe
Q 016877 321 VLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLN 378 (381)
Q Consensus 321 ~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i 378 (381)
.+.... ..........+++.+++++........ .......++++|+++++...+
T Consensus 211 ~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~-~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 211 RITDSA---YGDWFPHPSPSGDKVVFVSYDADVFDH-PRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp ECCCCS---EEEEEEEECTTSSEEEEEEEETTCCSC-CSSEEEEEEEEETTSCSCEEE
T ss_pred EEecCC---cccCCeEECCCCCEEEEEEcCCCCCcc-cccCceEEEEEecCCCCceee
Confidence 554321 111111122356666666554221000 000013589999988776554
No 54
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.97 E-value=0.17 Score=44.84 Aligned_cols=69 Identities=14% Similarity=0.199 Sum_probs=37.3
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeC---CEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDG---RYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
+.+++.|+.+ ..+.++|+.+.+|..+..+... ...-.+++... +.+++.|+.++ .+..+|..
T Consensus 71 ~~~l~s~s~D------~~v~iWd~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYD------RKVIIWREENGTWEKSHEHAGH-DSSVNSVCWAPHDYGLILACGSSDG--------AISLLTYT 135 (316)
T ss_dssp SSCEEEEETT------SCEEEECCSSSCCCEEEEECCC-SSCCCEEEECCTTTCSCEEEECSSS--------CEEEEEEC
T ss_pred CCEEEEEECC------CEEEEEECCCCcceEEEEccCC-CCceEEEEECCCCCCcEEEEEcCCC--------CEEEEecC
Confidence 5677777765 2477889888776554322211 01112333332 45677776544 35667766
Q ss_pred CC-cEEeC
Q 016877 199 TK-KWQDL 205 (381)
Q Consensus 199 ~~-~W~~~ 205 (381)
+. .|...
T Consensus 136 ~~~~~~~~ 143 (316)
T 3bg1_A 136 GEGQWEVK 143 (316)
T ss_dssp SSSCEEEC
T ss_pred CCCCccee
Confidence 54 46543
No 55
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.95 E-value=0.82 Score=40.56 Aligned_cols=197 Identities=12% Similarity=0.141 Sum_probs=89.5
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCC--CeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTD--NTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
+++.++.|+.+. .+.++|... ..++.+..+... ...-.+++. -++.+++.|+.++ .+..+|.
T Consensus 118 ~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~--------~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRDK------SVWIWETDESGEEYECISVLQEH-SQDVKHVIWHPSEALLASSSYDD--------TVRIWKD 182 (330)
T ss_dssp TSCEEEEEETTS------CEEEEECCTTCCCCEEEEEECCC-SSCEEEEEECSSSSEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEeccC-CCceEEEEECCCCCEEEEEcCCC--------eEEEEEC
Confidence 456777777642 477788742 234433222221 011122333 2456677776544 3666777
Q ss_pred CCCcEEeCCCCCC-CCcccEEEEEC---CEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCC--CCcceeE
Q 016877 198 ETKKWQDLPPLPV-PRYAPATQLWR---GRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPR--GGPHRAC 271 (381)
Q Consensus 198 ~~~~W~~~~~~p~-~r~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~--~~~~~~~ 271 (381)
.+..|+.+..+.. ...-.++.... +..++.|+.++ .+..|++.... ......|.....++. ...-.++
T Consensus 183 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDD-EDDQQEWVCEAILPDVHKRQVYNV 256 (330)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEEC-TTSCEEEEEEEECCSCCSSCEEEE
T ss_pred CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCC-ccccceeEEeeecccccccceEEE
Confidence 7766665543321 11111222222 34556665433 56777754211 112334555443332 1111122
Q ss_pred EEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceEEEE--E--CCEEEEE
Q 016877 272 VVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVL--V--NNSIVIV 346 (381)
Q Consensus 272 ~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~~~~--~--~~~l~v~ 346 (381)
+...+.+++.||.++. +..|| .+..|+.+..............+. . ++.+++.
T Consensus 257 ~~s~~~~l~s~~~dg~----------------------v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las 314 (330)
T 2hes_X 257 AWGFNGLIASVGADGV----------------------LAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILAT 314 (330)
T ss_dssp EECTTSCEEEEETTSC----------------------EEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEE
T ss_pred EEcCCCEEEEEeCCCE----------------------EEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEE
Confidence 2224456666776533 56666 566675543221111110111122 2 4678888
Q ss_pred cccccccCCceeeeeecceEEEEcCC
Q 016877 347 GGTTEKHPTTKKMVLVGEIFQFNLNT 372 (381)
Q Consensus 347 GG~~~~~~~~~~~~~~~~v~~yd~~~ 372 (381)
|+.++ .+.++|+++
T Consensus 315 ~s~Dg------------~v~~W~~~~ 328 (330)
T 2hes_X 315 GGDDG------------IVNFWSLEK 328 (330)
T ss_dssp EETTS------------EEEEEEC--
T ss_pred ecCCC------------cEEEEEecc
Confidence 87664 366777653
No 56
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.84 E-value=0.84 Score=39.84 Aligned_cols=143 Identities=13% Similarity=0.036 Sum_probs=66.1
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEeee-cccccccccCcceEeecCCCCCeEEccCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTK-KDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
++.+.+.|+.++ .+..||..++. ..+.. ....-..+..... .....+ .....+..+|..+.+-... +.
T Consensus 34 ~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~-~~d~~i~vwd~~~~~~~~~--~~ 104 (312)
T 4ery_A 34 NGEWLASSSADK-----LIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSA-SDDKTLKIWDVSSGKCLKT--LK 104 (312)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEE--EE
T ss_pred CCCEEEEeeCCC-----eEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEEE-CCCCEEEEEECCCCcEEEE--Ec
Confidence 456667776555 56778887766 22322 1111111111000 000000 1223566777766543221 11
Q ss_pred CCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEec-CCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCC
Q 016877 110 VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQC 185 (381)
Q Consensus 110 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~ 185 (381)
.......++.+ ++.+++.|+.++ .+.+||+.+.+-.. +..... .-.+++. .++.+++.|+.++
T Consensus 105 ~~~~~v~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~d~--- 171 (312)
T 4ery_A 105 GHSNYVFCCNFNPQSNLIVSGSFDE------SVRIWDVKTGKCLKTLPAHSD----PVSAVHFNRDGSLIVSSSYDG--- 171 (312)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTS------CEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSEEEEEETTS---
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCEEEEEecCCCC----cEEEEEEcCCCCEEEEEeCCC---
Confidence 11111122222 456677777642 47888988765332 211111 1122333 2456667776543
Q ss_pred CCCcceEEEEECCCCcE
Q 016877 186 RGPTAHTFVLDTETKKW 202 (381)
Q Consensus 186 ~~~~~~~~~yd~~~~~W 202 (381)
.+..||..+.+-
T Consensus 172 -----~i~~wd~~~~~~ 183 (312)
T 4ery_A 172 -----LCRIWDTASGQC 183 (312)
T ss_dssp -----CEEEEETTTCCE
T ss_pred -----cEEEEECCCCce
Confidence 378899887654
No 57
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.82 E-value=0.24 Score=45.71 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=54.1
Q ss_pred cceEeecCCCCCeEEccCCC---CCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccce
Q 016877 90 ATFQDLPAPELKWEKMKAAP---VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSH 164 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p---~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~ 164 (381)
..+..+|..+.+.....+.. .+......+.+ ++.+++.++.+ ..+.+||+.+.+-...-.... ..-
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~~~---~~~ 214 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDLTG---KWS 214 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEECSS---SSE
T ss_pred CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcCCC---CCe
Confidence 35888888877765433221 11111222333 67888888753 358899988765433211111 112
Q ss_pred EEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEe
Q 016877 165 LGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQD 204 (381)
Q Consensus 165 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~ 204 (381)
.+++.. ++.+|+.+..+ ..+.+||+.+.+...
T Consensus 215 ~~~~~~~~~~~l~~~~~~~--------~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 215 KILLYDPIRDLVYCSNWIS--------EDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEEETTTTEEEEEETTT--------TEEEEEETTTTEEEE
T ss_pred eEEEEcCCCCEEEEEecCC--------CcEEEEECCCCcEEE
Confidence 233333 45677776432 458999998876543
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.81 E-value=0.08 Score=47.94 Aligned_cols=134 Identities=10% Similarity=0.020 Sum_probs=62.1
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCe-EecCCCCCCCCccceEEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~r~~~~~ 167 (381)
.+..+|..+..|..+..+........++.+ ++.+++.|+.+ ..+.+||..+.+ |.....+... ...-.++
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~~~~~-~~~v~~~ 106 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDGTWKQTLVLLRL-NRAATFV 106 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------CCCCEEECCCC-SSCEEEE
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCCceeeeeEeccc-CCceEEE
Confidence 566777777777776665543333333333 45677777754 247888888776 5543333221 1112223
Q ss_pred EEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCc-EEeCCCCCC--CCcccEEEEE-CCEEEEEccCCCCCCCCCccce
Q 016877 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK-WQDLPPLPV--PRYAPATQLW-RGRLHVMGGSGENRYTPEVDHW 242 (381)
Q Consensus 168 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~--~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 242 (381)
+.. ++++++.|+.++ .+..||..+.+ |..+..+.. ...-.+++.. ++++++.|+.++ .+..|
T Consensus 107 ~~~~~~~~l~~~~~d~--------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw 173 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGAR--------VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR-----KAYVL 173 (377)
T ss_dssp ECCTTSSCCEEEESSS--------CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS-----CEEEE
T ss_pred EECCCCCEEEEEecCC--------eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC-----EEEEE
Confidence 332 455666666433 36777777654 323322222 2222233332 556777776543 45566
Q ss_pred Ee
Q 016877 243 SL 244 (381)
Q Consensus 243 ~~ 244 (381)
++
T Consensus 174 d~ 175 (377)
T 3dwl_C 174 SA 175 (377)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 59
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.72 E-value=0.5 Score=43.77 Aligned_cols=228 Identities=9% Similarity=0.003 Sum_probs=110.7
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
..+..+|.....-..+..-. .......+ +++.+++++.+... ..++++|+.+.+...+...+. ...+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~---~~v~~~~~Spdg~~la~~s~~~~~---~~i~~~d~~tg~~~~l~~~~~----~~~~~ 228 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP---QPLMSPAWSPDGSKLAYVTFESGR---SALVIQTLANGAVRQVASFPR----HNGAP 228 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES---SCEEEEEECTTSSEEEEEECTTSS---CEEEEEETTTCCEEEEECCSS----CEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCC---CcceeeEEcCCCCEEEEEEecCCC---cEEEEEECCCCcEEEeecCCC----cccCE
Confidence 35666776554433332211 11112222 55555555544322 469999999988776654332 12233
Q ss_pred EEe-CC-EEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 168 VTD-GR-YIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 168 ~~~-~~-~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
+.. ++ +|++.+..++ ...++.+|+.+.+...+...+. .....+. -+++.+++++... .....|.+
T Consensus 229 ~~spdg~~la~~~~~~g------~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~spdg~~l~~~s~~~----g~~~i~~~ 296 (415)
T 2hqs_A 229 AFSPDGSKLAFALSKTG------SLNLYVMDLASGQIRQVTDGRS--NNTEPTWFPDSQNLAFTSDQA----GRPQVYKV 296 (415)
T ss_dssp EECTTSSEEEEEECTTS------SCEEEEEETTTCCEEECCCCSS--CEEEEEECTTSSEEEEEECTT----SSCEEEEE
T ss_pred EEcCCCCEEEEEEecCC------CceEEEEECCCCCEEeCcCCCC--cccceEECCCCCEEEEEECCC----CCcEEEEE
Confidence 332 34 4555554333 3569999999988776654321 1112222 2455444443221 11233332
Q ss_pred eeecCCccCCceEEecCCCCCCcceeEEE--eCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEE
Q 016877 245 AVKDGKPLEKEWRTEIPIPRGGPHRACVV--VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKV 321 (381)
Q Consensus 245 ~~~~~~~~~~~W~~~~~~p~~~~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~ 321 (381)
|..+.+-+.+... .. ....+. -+++.+++++.... ...++.+| .+.....
T Consensus 297 -----d~~~~~~~~l~~~--~~-~~~~~~~spdG~~l~~~~~~~g-------------------~~~i~~~d~~~~~~~~ 349 (415)
T 2hqs_A 297 -----NINGGAPQRITWE--GS-QNQDADVSSDGKFMVMVSSNGG-------------------QQHIAKQDLATGGVQV 349 (415)
T ss_dssp -----ETTSSCCEECCCS--SS-EEEEEEECTTSSEEEEEEECSS-------------------CEEEEEEETTTCCEEE
T ss_pred -----ECCCCCEEEEecC--CC-cccCeEECCCCCEEEEEECcCC-------------------ceEEEEEECCCCCEEE
Confidence 2334333322111 11 112222 35665555554321 12478888 6666665
Q ss_pred cCCCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCceEEee
Q 016877 322 LPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLNA 379 (381)
Q Consensus 322 i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~ 379 (381)
+.... .........+++.+++++.+... ..++.+|+++...+.+.
T Consensus 350 l~~~~----~~~~~~~spdg~~l~~~s~~~~~---------~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 350 LSSTF----LDETPSLAPNGTMVIYSSSQGMG---------SVLNLVSTDGRFKARLP 394 (415)
T ss_dssp CCCSS----SCEEEEECTTSSEEEEEEEETTE---------EEEEEEETTSCCEEECC
T ss_pred ecCCC----CcCCeEEcCCCCEEEEEEcCCCc---------cEEEEEECCCCcEEEee
Confidence 54321 11222244467777777654321 25899998877665543
No 60
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.67 E-value=0.23 Score=46.14 Aligned_cols=104 Identities=10% Similarity=0.060 Sum_probs=55.8
Q ss_pred eEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEE
Q 016877 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVL 195 (381)
Q Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~y 195 (381)
.+...++..++.|+.+ ..+.+||..+.+-... +... .........++.+++.|+.++ .+..|
T Consensus 137 ~~~~~d~~~l~~g~~d------g~i~iwd~~~~~~~~~--~~~h--~~~v~~l~~~~~~l~sg~~dg--------~i~vw 198 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRD------NTIKIWDKNTLECKRI--LTGH--TGSVLCLQYDERVIITGSSDS--------TVRVW 198 (435)
T ss_dssp EEEECCSSEEEEEESS------SCEEEEESSSCCEEEE--ECCC--SSCEEEEECCSSEEEEEETTS--------CEEEE
T ss_pred EEEEECCCEEEEEeCC------CeEEEEeCCCCeEEEE--EcCC--CCcEEEEEECCCEEEEEcCCC--------eEEEE
Confidence 3445577788888765 3478889877654332 1111 112233334677777777544 37888
Q ss_pred ECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEe
Q 016877 196 DTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 196 d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
|..+.+-... +......-.....++..++.|+.++ .+..|++
T Consensus 199 d~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~ 240 (435)
T 1p22_A 199 DVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDM 240 (435)
T ss_dssp ESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETTS-----CEEEEEC
T ss_pred ECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeC
Confidence 8887653222 1111111222333555667766543 4556654
No 61
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.56 E-value=0.18 Score=43.18 Aligned_cols=106 Identities=11% Similarity=-0.048 Sum_probs=57.5
Q ss_pred cceEeecCCC-CCeEEccCCCC-CCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPE-LKWEKMKAAPV-PRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~-~~W~~l~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
..++.+|..+ .+...+...+. .........-+++.++++...... ...++.+|..+..-..+..... ...+
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~-----~~~~ 134 (297)
T 2ojh_A 62 GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFG--KSAIYLLPSTGGTPRLMTKNLP-----SYWH 134 (297)
T ss_dssp TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTS--SCEEEEEETTCCCCEECCSSSS-----EEEE
T ss_pred CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCC--cceEEEEECCCCceEEeecCCC-----ccce
Confidence 4678888888 77666554332 121222233355555565533222 2458899988776555433221 2223
Q ss_pred EEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCC
Q 016877 168 VTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPL 208 (381)
Q Consensus 168 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 208 (381)
+.. +..|++.++.++ ...+|.+|..+.....+...
T Consensus 135 ~~spdg~~l~~~~~~~~------~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQ------VFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp EECTTSSEEEEEEEETT------EEEEEEEETTTCCEEECCCS
T ss_pred EECCCCCEEEEEECCCC------ceEEEEEECCCCcceEcccC
Confidence 332 345555554332 34688888888777666543
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.56 E-value=1.3 Score=40.11 Aligned_cols=106 Identities=10% Similarity=0.115 Sum_probs=51.9
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCCCe------Ee-cCCCCCCCCccceEEEEEeC--CEEEEEcCCCCCCCCCCcceE
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNT------WG-GRFDMPREMAHSHLGMVTDG--RYIYVVTGQYGPQCRGPTAHT 192 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~------W~-~~~~~~~~~~r~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~ 192 (381)
+.+++.|+.+ ..+.+||..+.+ -. .+...... ...-.+++... +.+++.|+.++ .+
T Consensus 126 ~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg--------~v 190 (416)
T 2pm9_A 126 DNVLASGGNN------GEIFIWDMNKCTESPSNYTPLTPGQSMSS-VDEVISLAWNQSLAHVFASAGSSN--------FA 190 (416)
T ss_dssp TTBEEEECSS------SCEEBCBTTTTSSCTTTCCCBCCCCSCCS-SCCCCEEEECSSCTTEEEEESSSS--------CE
T ss_pred CCEEEEEcCC------CeEEEEECCCCccccccccccccccccCC-CCCeeEEEeCCCCCcEEEEEcCCC--------CE
Confidence 5677777754 247788887764 11 11111111 11122344432 46777776543 48
Q ss_pred EEEECCCCcEEeCCCCCC-----CCcccEEEEEC--CEEEEEccCCCCCCCCCccceEe
Q 016877 193 FVLDTETKKWQDLPPLPV-----PRYAPATQLWR--GRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 193 ~~yd~~~~~W~~~~~~p~-----~r~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
..||..+.+-...-..+. ...-.+++... ..+++.|+.++. ...+..|++
T Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~ 247 (416)
T 2pm9_A 191 SIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDL 247 (416)
T ss_dssp EEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEET
T ss_pred EEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeC
Confidence 889998876433222221 12222333332 247777665431 124566654
No 63
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.55 E-value=0.33 Score=41.98 Aligned_cols=154 Identities=13% Similarity=0.049 Sum_probs=87.1
Q ss_pred cceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccc
Q 016877 162 HSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDH 241 (381)
Q Consensus 162 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 241 (381)
-+..++...++.+|+..|.++ .+.++|+++.+=...- ++..-....++..+++||+....++ ....
T Consensus 55 ~ftqGL~~~~~~Ly~stG~~g--------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~-----~v~V 120 (268)
T 3nok_A 55 AFTQGLVFHQGHFFESTGHQG--------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEG-----LLFT 120 (268)
T ss_dssp CCEEEEEEETTEEEEEETTTT--------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSC-----EEEE
T ss_pred cccceEEEECCEEEEEcCCCC--------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCC-----EEEE
Confidence 344667778999999988654 2889999987643322 4444445567788999999965332 2222
Q ss_pred eEeeeecCCccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCe-
Q 016877 242 WSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKW- 319 (381)
Q Consensus 242 ~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W- 319 (381)
| |+.+.+-.. ..+....+.+++..+++||+..|. +.++.+| ++.+-
T Consensus 121 ~-------D~~Tl~~~~--ti~~~~eGwGLt~Dg~~L~vSdGs-----------------------~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 121 W-------SGMPPQRER--TTRYSGEGWGLCYWNGKLVRSDGG-----------------------TMLTFHEPDGFALV 168 (268)
T ss_dssp E-------ETTTTEEEE--EEECSSCCCCEEEETTEEEEECSS-----------------------SEEEEECTTTCCEE
T ss_pred E-------ECCcCcEEE--EEeCCCceeEEecCCCEEEEECCC-----------------------CEEEEEcCCCCeEE
Confidence 2 243333322 222222234677778899998762 2478887 55432
Q ss_pred EEcC--CCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCc
Q 016877 320 KVLP--SMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (381)
Q Consensus 320 ~~i~--~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 374 (381)
..+. .-+.+.... --+...+++||+-- +. .++|.+.|+++++
T Consensus 169 ~~I~V~~~g~~v~~l-NeLe~~dG~lyanv-w~-----------s~~I~vIDp~TG~ 212 (268)
T 3nok_A 169 GAVQVKLRGQPVELI-NELECANGVIYANI-WH-----------SSDVLEIDPATGT 212 (268)
T ss_dssp EEEECEETTEECCCE-EEEEEETTEEEEEE-TT-----------CSEEEEECTTTCB
T ss_pred EEEEeCCCCcccccc-cccEEeCCEEEEEE-CC-----------CCeEEEEeCCCCc
Confidence 1221 111111111 12344588888532 11 2368888888765
No 64
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.53 E-value=1.7 Score=42.62 Aligned_cols=241 Identities=10% Similarity=-0.056 Sum_probs=113.6
Q ss_pred cceEeecCC--C-CCeEEccCCCCC----CCCceEEEECCEEEEEecCCC----CCCcccceEEEeCCC------CeEec
Q 016877 90 ATFQDLPAP--E-LKWEKMKAAPVP----RLDGAAIQIKNLLYVFAGYGS----IDYVHSHVDIYNFTD------NTWGG 152 (381)
Q Consensus 90 ~~~~~~~~~--~-~~W~~l~~~p~~----r~~~~~~~~~~~iyv~GG~~~----~~~~~~~~~~yd~~~------~~W~~ 152 (381)
..++.++.. . ..-.++...+.. +....+..-+++.+++...+. ......+++++|+.+ .+-+.
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 467777776 3 555666654321 111122233554444443321 112235699999988 66665
Q ss_pred CC-CCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECC-CC---cEEeCCCCCCCCcccEEEE-ECCEEEE
Q 016877 153 RF-DMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE-TK---KWQDLPPLPVPRYAPATQL-WRGRLHV 226 (381)
Q Consensus 153 ~~-~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~-~~---~W~~~~~~p~~r~~~~~~~-~~~~lyv 226 (381)
+. .-+. ........-+++..++...+.....-...+++++|.. +. ..+.+..-. ......... -++++|+
T Consensus 182 l~~~~~~---~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 182 LSDDAHR---FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp SSCSCSS---EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSCEEE
T ss_pred EEecCCC---cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-CceEcceEECCCCeEEE
Confidence 54 2221 1111122234443333332221110113689999998 56 333332211 111122222 2677776
Q ss_pred EccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCCc-------ceeEEEe-CCEEEEEccCCCCCCCCCCCCccc
Q 016877 227 MGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGP-------HRACVVV-DDRLLVIGGQEGDFMAKPGSPIFK 298 (381)
Q Consensus 227 ~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~-------~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~ 298 (381)
.+..++ ....|. +|..+.+++.+.+...... ...++.. ++++++.+.. +
T Consensus 258 ~~~~~~-----~~~l~~-----~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~------------ 314 (662)
T 3azo_A 258 ATDRTG-----WWNLHR-----VDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G------------ 314 (662)
T ss_dssp EECTTS-----SCEEEE-----ECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S------------
T ss_pred EECCCC-----CeEEEE-----EECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C------------
Confidence 654332 122333 3455677776543221110 1123333 6777776654 2
Q ss_pred cccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceEE-EEECCEEEEEcccccccCCceeeeeecceEEEEcCCCceE
Q 016877 299 CSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAW-VLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAV 376 (381)
Q Consensus 299 ~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~~-~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 376 (381)
...+|.+| ++...+.+.. + .... ..+ ..-++.+++..+.... ..++|.+|+++++.+
T Consensus 315 --------~~~l~~~d~~~~~~~~l~~-~--~~~~-~~~~s~~~~~~~~~~~~~~~---------~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 315 --------AAVLGILDPESGELVDAAG-P--WTEW-AATLTVSGTRAVGVAASPRT---------AYEVVELDTVTGRAR 373 (662)
T ss_dssp --------SCEEEEEETTTTEEEECCS-S--CCEE-EEEEEEETTEEEEEEEETTE---------EEEEEEEETTTCCEE
T ss_pred --------ccEEEEEECCCCcEEEecC-C--CCeE-EEEEecCCCEEEEEEcCCCC---------CCEEEEEECCCCceE
Confidence 23578777 5565666532 1 1111 122 3345666666543322 236888898888776
Q ss_pred Ee
Q 016877 377 LN 378 (381)
Q Consensus 377 ~i 378 (381)
.+
T Consensus 374 ~l 375 (662)
T 3azo_A 374 TI 375 (662)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 65
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.50 E-value=1.2 Score=39.31 Aligned_cols=99 Identities=13% Similarity=0.038 Sum_probs=52.1
Q ss_pred CcceEeecCCCCCeEEccCCCCCCCCceEEE-EC-CEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCC------
Q 016877 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQ-IK-NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM------ 160 (381)
Q Consensus 89 ~~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~------ 160 (381)
...+..+|..+.+-...-+.. ..-..++. -+ +++|+.+..+ ..+.++|+.+.+-...-+.+...
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHND--LKPFGATINNTTQTLWFGNTVN------SAVTAIDAKTGEVKGRLVLDDRKRTEEVR 139 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSEEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEEESCCCCCCSSCC
T ss_pred CccEEEEcCCCCeEEEEEecC--CCcceEEECCCCCEEEEEecCC------CEEEEEeCCCCeeEEEEecCCCccccccC
Confidence 346788888777543322221 11223333 33 4688877543 35899999887643221121100
Q ss_pred ccceEEEEE--eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcE
Q 016877 161 AHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (381)
Q Consensus 161 ~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (381)
+.....++. .++.+|+.+... ...++.+|+++.+-
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGK-------ESVIWVVDGGNIKL 176 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESS-------SCEEEEEETTTTEE
T ss_pred CCCCceEEECCCCCEEEEEecCC-------CceEEEEcCCCCce
Confidence 011233444 346688775211 24589999987754
No 66
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.46 E-value=0.23 Score=43.62 Aligned_cols=95 Identities=11% Similarity=0.068 Sum_probs=46.6
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++..+++|+.+ ..+.+||..+.+......+.... ..-.+++.. +++.++.|+.+ ..+..||..+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d--------g~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAELTSSA-PACYALAISPDSKVCFSCCSD--------GNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEEEECSS-SCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeeecccCC-CceEEEEECCCCCEEEEEeCC--------CcEEEEeCCC
Confidence 45666666653 35888999887754433222211 112233333 45566666543 3488899987
Q ss_pred CcEEeCCCCCCCCcccEEEEE-CCEEEEEccCC
Q 016877 200 KKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSG 231 (381)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~ 231 (381)
.+....-... ...-.+++.. +++.++.++.+
T Consensus 173 ~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 173 QTLVRQFQGH-TDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp TEEEEEECCC-SSCEEEEEECTTSSEEEEEETT
T ss_pred Cceeeeeecc-cCceEEEEECCCCCEEEEEecC
Confidence 7543321111 1112222222 55566666643
No 67
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.40 E-value=1.1 Score=38.39 Aligned_cols=167 Identities=13% Similarity=0.040 Sum_probs=81.1
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecCC-CCCCCceeEEee--ecccccccccCcceEeecCCCCCeEEccCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNN-GPQKGENIGVKT--KKDVVPKRILPATFQDLPAPELKWEKMKAA 108 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~ 108 (381)
++.||+....+ +.+..||+. +. ..++.. ......+++... ..+... .....+.++|+. .++.... +
T Consensus 30 ~g~l~v~~~~~-----~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~--~~~~~v~~~d~~-g~~~~~~-~ 99 (300)
T 2qc5_A 30 DGKVWFTQHKA-----NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTE--NGANKIGKLSKK-GGFTEYP-L 99 (300)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEE--TTTTEEEEECTT-SCEEEEE-C
T ss_pred CCCEEEEcCCC-----CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEe--cCCCeEEEECCC-CCeEEec-C
Confidence 67888876422 367888888 55 332221 111122222211 122211 123468888887 6665432 2
Q ss_pred CCCCCC-ceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCC
Q 016877 109 PVPRLD-GAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQC 185 (381)
Q Consensus 109 p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~ 185 (381)
+..... ..++.. ++.+|+..... ..+.+||+. .+..... ++... .....++. .++++|+....
T Consensus 100 ~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~~-~~~~~i~~d~~g~l~v~~~~----- 165 (300)
T 2qc5_A 100 PQPDSGPYGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYD-LPNKG-SYPAFITLGSDNALWFTENQ----- 165 (300)
T ss_dssp SSTTCCEEEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEE-CSSTT-CCEEEEEECTTSSEEEEETT-----
T ss_pred CCCCCCCccceECCCCCEEEEccCC------CeEEEECCC-CCEEEcc-CCCCC-CCceeEEECCCCCEEEEecC-----
Confidence 211122 233332 56888875321 348889987 5554332 22111 22234444 35678886421
Q ss_pred CCCcceEEEEECCCCcEEeCCCCCCCCcc-cEEEEE-CCEEEEEc
Q 016877 186 RGPTAHTFVLDTETKKWQDLPPLPVPRYA-PATQLW-RGRLHVMG 228 (381)
Q Consensus 186 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~lyv~G 228 (381)
...+++||+ +.+..... ++..... ..++.- ++.||+..
T Consensus 166 ---~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 166 ---NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp ---TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred ---CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEc
Confidence 246899998 66665532 2211112 223332 56788774
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.40 E-value=0.75 Score=41.99 Aligned_cols=92 Identities=5% Similarity=-0.030 Sum_probs=45.3
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEec-CCCCCCCCccceEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RFDMPREMAHSHLG 166 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~ 166 (381)
..+..+|..+.+-... +........++.+ ++.+++.|+.+ ..+.+||+.+.+-.. +.... ..-.+
T Consensus 119 g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~h~----~~v~~ 186 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREI--DQAHVSEITKLKFFPSGEALISSSQD------MQLKIWSVKDGSNPRTLIGHR----ATVTD 186 (420)
T ss_dssp SCEEEECTTSCEEEEE--TTSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCCCEEEECCS----SCEEE
T ss_pred CCEEEEeCCCcceeee--cccccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCcCceEEcCCC----CcEEE
Confidence 3567777765543222 2222222222222 45667777654 258888987653211 11111 11223
Q ss_pred EEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCc
Q 016877 167 MVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 167 ~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
++.. ++..++.|+.++ .+..||..+.+
T Consensus 187 ~~~~~~~~~l~s~~~d~--------~v~iwd~~~~~ 214 (420)
T 3vl1_A 187 IAIIDRGRNVLSASLDG--------TIRLWECGTGT 214 (420)
T ss_dssp EEEETTTTEEEEEETTS--------CEEEEETTTTE
T ss_pred EEEcCCCCEEEEEcCCC--------cEEEeECCCCc
Confidence 3333 455566666443 37788887764
No 69
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.36 E-value=1.3 Score=38.69 Aligned_cols=123 Identities=7% Similarity=-0.038 Sum_probs=60.3
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
..+..+|..+.+......+...........+ ++..++.|+.+ ..+.+||..+.+....-.... ..-.++
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~~---~~i~~~ 189 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGHT---DGASCI 189 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCS---SCEEEE
T ss_pred CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCceeeeeeccc---CceEEE
Confidence 4577788777664443333222222222222 45666677654 248889998876544221111 112233
Q ss_pred EEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEE-ECCEEEEEccCC
Q 016877 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSG 231 (381)
Q Consensus 168 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~ 231 (381)
+.. ++..++.|+.+ ..+..||..+.+-...-..+ ..-.+++. -+++++++|+.+
T Consensus 190 ~~~~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 190 DISNDGTKLWTGGLD--------NTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp EECTTSSEEEEEETT--------SEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCCEEEEEecC--------CcEEEEECCCCceEeeecCC--CceEEEEECCCCCEEEEEcCC
Confidence 332 45566666533 45888998876533221211 12223333 255666676643
No 70
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.32 E-value=1 Score=40.11 Aligned_cols=102 Identities=15% Similarity=0.088 Sum_probs=47.4
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCCCCccceEEEE-EeCCEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMV-TDGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
++..++.||.+ ..+.+||+.+.. ......+... ...-.++. ..++. ++.|+.+ ..+..||+
T Consensus 108 ~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~-l~s~s~d--------~~i~~wd~ 171 (340)
T 1got_B 108 SGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGH-TGYLSCCRFLDDNQ-IVTSSGD--------TTCALWDI 171 (340)
T ss_dssp TSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECC-SSCEEEEEEEETTE-EEEEETT--------SCEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCC-CccEEEEEECCCCc-EEEEECC--------CcEEEEEC
Confidence 45677777764 247778876542 1111111110 01111222 24555 4455433 34788998
Q ss_pred CCCcEEeCCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 198 ETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 198 ~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
.+.+-...-.- ....-.+++. -++++++.|+.++ .+..|++
T Consensus 172 ~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~ 213 (340)
T 1got_B 172 ETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDV 213 (340)
T ss_dssp TTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CCCcEEEEEcC-CCCceEEEEECCCCCEEEEEeCCC-----cEEEEEC
Confidence 87754321111 1111122222 2566777777543 4566653
No 71
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.30 E-value=0.12 Score=52.23 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=54.2
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eC--CEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DG--RYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~--~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
++..++.|+.+ ..+.+||...+++..+..+... ...-.+++. .+ +.+++.|+.++ .+..||.
T Consensus 20 dg~~latg~~d------g~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s~Dg--------~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDG--------KVLIWKE 84 (753)
T ss_dssp SSCCEEEEETT------TEEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEETTS--------CEEEEEE
T ss_pred CCCeEEEEECC------CcEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEeCCC--------eEEEEEC
Confidence 34566677654 2477888877777765544431 112223333 23 56677776544 3788888
Q ss_pred CCCcEEeCCCCCCC-CcccEEEEE-C--CEEEEEccCCC
Q 016877 198 ETKKWQDLPPLPVP-RYAPATQLW-R--GRLHVMGGSGE 232 (381)
Q Consensus 198 ~~~~W~~~~~~p~~-r~~~~~~~~-~--~~lyv~GG~~~ 232 (381)
.+.+|..+..+... ..-.+++.. + +.+++.|+.++
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 88887666544322 222233332 2 56777776543
No 72
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.27 E-value=1.9 Score=42.66 Aligned_cols=64 Identities=16% Similarity=0.018 Sum_probs=35.0
Q ss_pred cceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCCC-cEEeC
Q 016877 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK-KWQDL 205 (381)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~-~W~~~ 205 (381)
..++++|+.+.+-..+...... ...-..++. -+++..+++..+... ....++.+|+.+. ..+.+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~---~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK-EKFLTNLSWSPDENILYVAEVNRAQ---NECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT-TCEEEEEEECTTSSEEEEEEECTTS---CEEEEEEEETTTCCEEEEE
T ss_pred eEEEEEECCCCceEeeccCCCC-ceeEeeEEEECCCCEEEEEEeCCCC---CeeEEEEEECCCCceeeEE
Confidence 5699999998876665432111 122223333 244433333333221 2468999999988 66554
No 73
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.24 E-value=0.034 Score=50.46 Aligned_cols=96 Identities=14% Similarity=0.160 Sum_probs=47.2
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++.+++.|+.+ ..+.+||..++.|+.+..+.... ..-.+++.. ++++++.|+.++ .+..||..+
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d~--------~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDGNGWKHARTFSDHD-KIVTCVDWAPKSNRIVTCSQDR--------NAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEETTEEEECCCBCCCS-SCEEEEEECTTTCCEEEEETTS--------SEEEC----
T ss_pred CCCEEEEecCC------CEEEEEEccCCceEEEEEEecCC-ceEEEEEEeCCCCEEEEEeCCC--------eEEEEEcCC
Confidence 45666777654 24778888888888876665421 122333333 456666776443 377888877
Q ss_pred Cc-EEeCCCCC-CCCcccEEEEE-CCEEEEEccCC
Q 016877 200 KK-WQDLPPLP-VPRYAPATQLW-RGRLHVMGGSG 231 (381)
Q Consensus 200 ~~-W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~ 231 (381)
.. |.....+. ....-.+++.. ++++++.|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence 65 43322221 11122222222 45666666654
No 74
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.22 E-value=0.088 Score=47.93 Aligned_cols=119 Identities=15% Similarity=0.108 Sum_probs=61.0
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE-CC-EEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
..+..+|..+.+-...-... ..-.+++.. ++ .||+.++.+ ..+.++|+.+++....-..+. .-.++
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d------~~i~v~d~~~~~~~~~~~~~~----~v~~~ 79 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHS------NDVSIIDTATNNVIATVPAGS----SPQGV 79 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGG------TEEEEEETTTTEEEEEEECSS----SEEEE
T ss_pred CEEEEEECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCC------CeEEEEECCCCeEEEEEECCC----Cccce
Confidence 35777777766533221111 111222222 33 677777543 358899998887654322222 12233
Q ss_pred EEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-C-CEEEEEccC
Q 016877 168 VTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-R-GRLHVMGGS 230 (381)
Q Consensus 168 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~ 230 (381)
+.. ++.||+.+.. ...+.+||+.+.+-...-.. ......++.. + ..+|+.++.
T Consensus 80 ~~spdg~~l~~~~~~--------~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~ 136 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMA--------SSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNG 136 (391)
T ss_dssp EECTTSSEEEEEETT--------TTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETT
T ss_pred EECCCCCEEEEEECC--------CCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCC
Confidence 333 4457766542 24689999998765433221 2222333333 3 357677653
No 75
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.18 E-value=1.3 Score=37.60 Aligned_cols=170 Identities=14% Similarity=0.062 Sum_probs=81.1
Q ss_pred cCEEEE-ecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--eecccccccccCcceEeecCCCCCeEEccCC
Q 016877 33 ADFFWA-SSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPELKWEKMKAA 108 (381)
Q Consensus 33 ~~~ly~-~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~ 108 (381)
++.||+ ....+ +.+..||+.+.. ...+........+++.. +..+.... ...+..+|+.......+...
T Consensus 34 ~g~l~v~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~---~~~i~~~d~~~~~~~~~~~~ 105 (270)
T 1rwi_B 34 AGNVYVTSEGMY-----GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF---NNRVVTLAAGSNNQTVLPFD 105 (270)
T ss_dssp TCCEEEEECSSS-----CEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET---TTEEEEECTTCSCCEECCCC
T ss_pred CCCEEEEccCCC-----CcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC---CCEEEEEeCCCceEeeeecC
Confidence 568998 53322 356788887666 33332111122333322 22333222 44688888877654443211
Q ss_pred CCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCC
Q 016877 109 PVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCR 186 (381)
Q Consensus 109 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~ 186 (381)
.. ..-..++.. ++++|+.... ...+.++|..+........... .....++.. ++++|+....
T Consensus 106 ~~-~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~------ 169 (270)
T 1rwi_B 106 GL-NYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGL---NDPDGVAVDNSGNVYVTDTD------ 169 (270)
T ss_dssp SC-SSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCSC---CSCCCEEECTTCCEEEEEGG------
T ss_pred Cc-CCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccccC---CCceeEEEeCCCCEEEEECC------
Confidence 11 111233332 5678887542 2347888876655443221111 112234443 5678887431
Q ss_pred CCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CCEEEEEcc
Q 016877 187 GPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGG 229 (381)
Q Consensus 187 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG 229 (381)
...+.+||+.+..-........ ..-..+++- ++.+|+...
T Consensus 170 --~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 170 --NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp --GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEET
T ss_pred --CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEEC
Confidence 3568999998776544322111 112233333 457888753
No 76
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.14 E-value=1.4 Score=37.84 Aligned_cols=167 Identities=8% Similarity=0.010 Sum_probs=80.2
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecC-CCCCCCceeEEe--eecccccccccCcceEeecCCCCCeEEccCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPN-NGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPELKWEKMKAA 108 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~ 108 (381)
++.+|+....+ +.+..||+. +. ...+. .......+++.. +..+... .....+.++++. .+.+... +
T Consensus 25 ~g~l~v~~~~~-----~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~--~~~~~i~~~~~~-g~~~~~~-~ 94 (299)
T 2z2n_A 25 KGKVWITQHKA-----NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTE--NAANKIGRITKK-GIIKEYT-L 94 (299)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEE--TTTTEEEEECTT-SCEEEEE-C
T ss_pred CCCEEEEecCC-----CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeC--CCCCeEEEECCC-CcEEEEe-C
Confidence 67888865322 367888888 55 33321 111112222221 1122211 112357788876 4444433 2
Q ss_pred CCCCCC-ceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCC
Q 016877 109 PVPRLD-GAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQC 185 (381)
Q Consensus 109 p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~ 185 (381)
|..-.. ..++.. ++.+|+.... ...+.++|+ +.+..... .+.. ......++.. ++.+|+..-
T Consensus 95 ~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~-~~~~-~~~~~~i~~~~~g~l~v~~~------ 159 (299)
T 2z2n_A 95 PNPDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYE-LPNK-GSYPSFITLGSDNALWFTEN------ 159 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEE-CSST-TCCEEEEEECTTSCEEEEET------
T ss_pred CCcCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEec-CCCC-CCCCceEEEcCCCCEEEEeC------
Confidence 222222 233333 4688887532 135888998 55555432 1111 1223344443 568888642
Q ss_pred CCCcceEEEEECCCCcEEeCCCCCCC-CcccEEEEE-CCEEEEEc
Q 016877 186 RGPTAHTFVLDTETKKWQDLPPLPVP-RYAPATQLW-RGRLHVMG 228 (381)
Q Consensus 186 ~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~-~~~lyv~G 228 (381)
....+++||+ +.+..... .+.. ..-..++.. ++++|+..
T Consensus 160 --~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 160 --QNNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp --TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred --CCCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEc
Confidence 1356899999 76666532 1111 111233332 46788774
No 77
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.13 E-value=0.7 Score=42.54 Aligned_cols=144 Identities=10% Similarity=0.003 Sum_probs=65.2
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEee-ecccccccccCcceEeecCCCCCeEEccCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKT-KKDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
++.+.+.|+.++ .+..||..+++ ..+.... ..-..+.... +.....+ .....+..+|..+.+- +..+.
T Consensus 119 ~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~~h~-~~V~~v~~~~~~~~l~sg-s~D~~i~iwd~~~~~~--~~~~~ 189 (410)
T 1vyh_C 119 VFSVMVSASEDA-----TIKVWDYETGDFERTLKGHT-DSVQDISFDHSGKLLASC-SADMTIKLWDFQGFEC--IRTMH 189 (410)
T ss_dssp SSSEEEEEESSS-----CEEEEETTTCCCCEEECCCS-SCEEEEEECTTSSEEEEE-ETTSCCCEEETTSSCE--EECCC
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEeccC-CcEEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCce--eEEEc
Confidence 456677777655 67889988876 3333211 1111111100 0001000 1122455566554432 22222
Q ss_pred CCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCC
Q 016877 110 VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCR 186 (381)
Q Consensus 110 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 186 (381)
.......++.+ ++..++.|+.+ ..+.+||..+..-...-.-.. ..-..+.. .++.+++.|+.++
T Consensus 190 ~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~h~---~~v~~~~~~~~g~~l~s~s~D~---- 256 (410)
T 1vyh_C 190 GHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKTFTGHR---EWVRMVRPNQDGTLIASCSNDQ---- 256 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEEECCS---SCEEEEEECTTSSEEEEEETTS----
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEeCCC---ccEEEEEECCCCCEEEEEcCCC----
Confidence 22222222333 45667777754 357888988765332111011 11112222 3456666776543
Q ss_pred CCcceEEEEECCCCcE
Q 016877 187 GPTAHTFVLDTETKKW 202 (381)
Q Consensus 187 ~~~~~~~~yd~~~~~W 202 (381)
.+..||..+..-
T Consensus 257 ----~v~vwd~~~~~~ 268 (410)
T 1vyh_C 257 ----TVRVWVVATKEC 268 (410)
T ss_dssp ----CEEEEETTTCCE
T ss_pred ----eEEEEECCCCce
Confidence 366777766543
No 78
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.94 E-value=0.88 Score=42.05 Aligned_cols=99 Identities=7% Similarity=0.002 Sum_probs=54.7
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE--CC-EEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 166 (381)
..++.+|..+.+...+...+. ......+ ++ +|++.+..++ ...++.+|+.+.+...+...+. ....
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~---~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~----~~~~ 271 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR---HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRS----NNTE 271 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS---CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSS----CEEE
T ss_pred cEEEEEECCCCcEEEeecCCC---cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCC----cccc
Confidence 367888888877666544322 1222222 44 4555554332 2359999999888776654332 1122
Q ss_pred EEE-eCCE-EEEEcCCCCCCCCCCcceEEEEECCCCcEEeC
Q 016877 167 MVT-DGRY-IYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL 205 (381)
Q Consensus 167 ~~~-~~~~-iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~ 205 (381)
.+. -+++ |++.+..++ ...++.+|..+.+-..+
T Consensus 272 ~~~spdg~~l~~~s~~~g------~~~i~~~d~~~~~~~~l 306 (415)
T 2hqs_A 272 PTWFPDSQNLAFTSDQAG------RPQVYKVNINGGAPQRI 306 (415)
T ss_dssp EEECTTSSEEEEEECTTS------SCEEEEEETTSSCCEEC
T ss_pred eEECCCCCEEEEEECCCC------CcEEEEEECCCCCEEEE
Confidence 333 2444 444432222 35799999988765544
No 79
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.92 E-value=1.4 Score=38.38 Aligned_cols=143 Identities=5% Similarity=-0.102 Sum_probs=64.0
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEeee-cccccccccCcceEeecCCCCCeEEccCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTK-KDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
++.+.+.|+.++ .+..||..++. ..+.... ..-..+..... .....+ .....+..+|..+.+-.. .+.
T Consensus 24 ~~~~l~s~~~dg-----~v~lWd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~-s~d~~i~vwd~~~~~~~~--~~~ 94 (304)
T 2ynn_A 24 TEPWVLTTLYSG-----RVELWNYETQVEVRSIQVTE-TPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEKVV--DFE 94 (304)
T ss_dssp SSSEEEEEETTS-----EEEEEETTTTEEEEEEECCS-SCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCEEE--EEE
T ss_pred CCCEEEEEcCCC-----cEEEEECCCCceeEEeeccC-CcEEEEEEeCCCCEEEEE-CCCCEEEEEECCCCcEEE--EEe
Confidence 556667777555 67889998876 3333211 00011111000 011111 122356677776654221 111
Q ss_pred CCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe--CCEEEEEcCCCCCCC
Q 016877 110 VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQC 185 (381)
Q Consensus 110 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~ 185 (381)
.......++.+ ++.+++.|+.++ .+.++|..++. .....+... ...-.+++.. ++.+++.|+.++
T Consensus 95 ~h~~~v~~~~~~~~~~~l~sgs~D~------~v~lWd~~~~~-~~~~~~~~h-~~~v~~v~~~p~~~~~l~sgs~D~--- 163 (304)
T 2ynn_A 95 AHPDYIRSIAVHPTKPYVLSGSDDL------TVKLWNWENNW-ALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLDR--- 163 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTS------CEEEEEGGGTT-EEEEEECCC-CSCEEEEEECTTCTTEEEEEETTS---
T ss_pred CCCCcEEEEEEcCCCCEEEEECCCC------eEEEEECCCCc-chhhhhccc-CCcEEEEEECCCCCCEEEEEeCCC---
Confidence 11111222222 456677777652 46777876541 111111110 1112334443 345677776543
Q ss_pred CCCcceEEEEECCCC
Q 016877 186 RGPTAHTFVLDTETK 200 (381)
Q Consensus 186 ~~~~~~~~~yd~~~~ 200 (381)
.+..||..+.
T Consensus 164 -----~v~iwd~~~~ 173 (304)
T 2ynn_A 164 -----TVKVWSLGQS 173 (304)
T ss_dssp -----EEEEEETTCS
T ss_pred -----eEEEEECCCC
Confidence 4777887543
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.89 E-value=1.4 Score=44.36 Aligned_cols=172 Identities=5% Similarity=-0.113 Sum_probs=77.6
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEee-ecccccccccCcceEeecCCCCCeEEccCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKT-KKDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
++.+.++|+.++ .+..||..++. ..+.... ..-..+.-.. +.....+ .....+..+|..+.+....-.
T Consensus 24 ~~~~la~~~~~g-----~v~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~-~~dg~i~vw~~~~~~~~~~~~-- 94 (814)
T 3mkq_A 24 TEPWVLTTLYSG-----RVEIWNYETQVEVRSIQVTE-TPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEKVVDFE-- 94 (814)
T ss_dssp SSSEEEEEETTS-----EEEEEETTTTEEEEEEECCS-SCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCEEEEEE--
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCceEEEEecCC-CcEEEEEEeCCCCEEEEE-eCCCeEEEEECCCCcEEEEEe--
Confidence 455666666444 67889988877 3333211 1111111110 1111111 113467778877766433211
Q ss_pred CCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCC-eEecC-CCCCCCCccceEEEEEe--CCEEEEEcCCCCC
Q 016877 110 VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDN-TWGGR-FDMPREMAHSHLGMVTD--GRYIYVVTGQYGP 183 (381)
Q Consensus 110 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~-~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~ 183 (381)
.......+..+ ++..++.|+.+ ..+.+||..++ ..... .... ..-.+++.. ++..++.|+.+
T Consensus 95 ~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~----~~v~~~~~~p~~~~~l~~~~~d-- 162 (814)
T 3mkq_A 95 AHPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFEGHE----HFVMCVAFNPKDPSTFASGCLD-- 162 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEECCS----SCEEEEEEETTEEEEEEEEETT--
T ss_pred cCCCCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEcCCC----CcEEEEEEEcCCCCEEEEEeCC--
Confidence 11111222222 45556666643 24778888765 33221 1111 112334443 45677776643
Q ss_pred CCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE---CCEEEEEccCC
Q 016877 184 QCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW---RGRLHVMGGSG 231 (381)
Q Consensus 184 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~ 231 (381)
..+..||..+..-...-..........++.. ++.+++.|+.+
T Consensus 163 ------g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 163 ------RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp ------SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT
T ss_pred ------CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC
Confidence 3478888765432111111111222233332 56677777654
No 81
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.88 E-value=1.5 Score=37.05 Aligned_cols=120 Identities=13% Similarity=-0.017 Sum_probs=58.7
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMV 168 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~ 168 (381)
..+..+++.+............ .-.+++.. ++.+|+... + ..+.+||+.......+..... .....++
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g~l~v~~~-~------~~i~~~d~~~~~~~~~~~~~~---~~p~~i~ 114 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGLY-QPQGLAVDGAGTVYVTDF-N------NRVVTLAAGSNNQTVLPFDGL---NYPEGLA 114 (270)
T ss_dssp CEEEEECC-----EECCCCSCC-SCCCEEECTTCCEEEEET-T------TEEEEECTTCSCCEECCCCSC---SSEEEEE
T ss_pred CcEEEecCCCcccceEeeCCcC-CcceeEECCCCCEEEEcC-C------CEEEEEeCCCceEeeeecCCc---CCCcceE
Confidence 3577787766554433221111 11233333 567888764 1 358889988776544422111 1223444
Q ss_pred Ee-CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CCEEEEEcc
Q 016877 169 TD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGG 229 (381)
Q Consensus 169 ~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG 229 (381)
.. ++++|+.... ...++++|..+........... ..-..+++. ++++|+...
T Consensus 115 ~~~~g~l~v~~~~--------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 115 VDTQGAVYVADRG--------NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp ECTTCCEEEEEGG--------GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEG
T ss_pred ECCCCCEEEEECC--------CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEEC
Confidence 43 6678887431 2458888877665544321111 111233333 567888753
No 82
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.87 E-value=0.72 Score=41.56 Aligned_cols=102 Identities=12% Similarity=0.134 Sum_probs=50.5
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
+++.++.|+.++ .+.++|..+++-...-.... ..-.+++.. ++.+++.++.++ .+..||..
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~~~~h~---~~v~~v~~s~~~~~~~~s~~~dg--------~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKSYNAHS---SEVNCVAACPGKDTIFLSCGEDG--------RILLWDTR 212 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEEECCCS---SCEEEEEECTTCSSCEEEEETTS--------CEEECCTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCC---CCEEEEEEccCCCceeeeeccCC--------ceEEEECC
Confidence 556777777643 47788988876443211111 112233332 234667776543 37778887
Q ss_pred CCcEEeCCCCCCCCccc-EEEEE--CCEEEEEccCCCCCCCCCccceEe
Q 016877 199 TKKWQDLPPLPVPRYAP-ATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 199 ~~~W~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
+.+-............. +++.. ++.+++.|+.+. .+..|++
T Consensus 213 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~ 256 (357)
T 4g56_B 213 KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNI 256 (357)
T ss_dssp SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEES
T ss_pred CCceeeeeeeccccccccchhhhhcccceEEEeeccc-----ceeEEEC
Confidence 76432221221111112 22222 356777776543 3455553
No 83
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.86 E-value=0.25 Score=44.07 Aligned_cols=61 Identities=8% Similarity=-0.002 Sum_probs=35.7
Q ss_pred ceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC
Q 016877 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (381)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (381)
.++.+|.++++++.+...... .....++. -++++|+.+...+ ...++.||+.+.+++.+..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~--~~p~~~a~spdg~l~~~~~~~~------~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAAT--QNPTYLALSAKDCLYSVDKEDD------EGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEEC--SCCCCEEECTTCEEEEEEEETT------EEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeecc--CCcceEEEccCCeEEEEEecCC------CceEEEEEecCCcEEEeee
Confidence 478888888888764322110 11112333 3677887753211 3678999998887766653
No 84
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.85 E-value=1.4 Score=39.61 Aligned_cols=100 Identities=9% Similarity=0.085 Sum_probs=48.9
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecC-CCCCCCCccceEEEEEe---CCEEEEEcCCCCCCCCCCcceEEEEE
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR-FDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLD 196 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd 196 (381)
++..++.|+.+ ..+.++|+.+.+-... ..... .-.++... ++..++.|+.++ .+..||
T Consensus 165 ~~~~l~t~s~D------~~v~lwd~~~~~~~~~~~~h~~----~v~~~~~~~~~~g~~l~sgs~Dg--------~v~~wd 226 (354)
T 2pbi_B 165 SDMQILTASGD------GTCALWDVESGQLLQSFHGHGA----DVLCLDLAPSETGNTFVSGGCDK--------KAMVWD 226 (354)
T ss_dssp SSSEEEEEETT------SEEEEEETTTCCEEEEEECCSS----CEEEEEECCCSSCCEEEEEETTS--------CEEEEE
T ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEEEEEcCCCC----CeEEEEEEeCCCCCEEEEEeCCC--------eEEEEE
Confidence 34455556543 3578889887754321 11111 11122221 346677777544 378889
Q ss_pred CCCCcEEeCCCCCCCCcccEEEEE-CCEEEEEccCCCCCCCCCccceEe
Q 016877 197 TETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 197 ~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
..+.+....-... ...-.+++.. ++.+++.|+.++ .+..|++
T Consensus 227 ~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~ 269 (354)
T 2pbi_B 227 MRSGQCVQAFETH-ESDVNSVRYYPSGDAFASGSDDA-----TCRLYDL 269 (354)
T ss_dssp TTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CCCCcEEEEecCC-CCCeEEEEEeCCCCEEEEEeCCC-----eEEEEEC
Confidence 8877643321111 1111122222 566777776543 4556653
No 85
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.81 E-value=0.9 Score=45.87 Aligned_cols=57 Identities=21% Similarity=0.123 Sum_probs=36.0
Q ss_pred ceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC
Q 016877 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP 206 (381)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~ 206 (381)
-+.+||+.+++++.......+ ...-.+++.. ++.||+-.. .-+++||+.+.+|+...
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNE-LLDVRVFYEDKNKKIWIGTH----------AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTC-CCCEEEEEECTTSEEEEEET----------TEEEEEESSSSSCCEEE
T ss_pred CEEEEcCCCCcEEEeccCCCC-CCeEEEEEECCCCCEEEEEC----------CceEEEeCCCCeEEecc
Confidence 488999999999887532111 1222233333 578887431 34899999998886654
No 86
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.75 E-value=0.98 Score=39.43 Aligned_cols=29 Identities=7% Similarity=0.048 Sum_probs=20.2
Q ss_pred CCEEEEEcccccccCCceeeeeecceEEEEcCCC-ceEEeec
Q 016877 340 NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTL-VAVLNAM 380 (381)
Q Consensus 340 ~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~-~W~~i~~ 380 (381)
++++++.|+.++ .+.+||.+++ .|+.+..
T Consensus 317 ~~~~l~s~~~dg------------~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 317 TGTILSSAGDDG------------KVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp SSCCEEEEETTS------------CEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEecCCC------------cEEEEecCcCcchhheee
Confidence 577888887653 3777777764 6887764
No 87
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.74 E-value=2 Score=43.39 Aligned_cols=59 Identities=7% Similarity=0.115 Sum_probs=36.0
Q ss_pred ceEEEeCCCCeEecCCCCCCCCc-cceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC
Q 016877 139 HVDIYNFTDNTWGGRFDMPREMA-HSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (381)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (381)
-+.+||+.+++++.......... ..-.+++.. ++.||+-.. +-+++||+++.+|+....
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~~~~~~~ 488 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL----------SALVRFNPEQRSFTTIEK 488 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES----------SCEEEEETTTTEEEECCB
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec----------CceeEEeCCCCeEEEccc
Confidence 37899999988877643111011 112233332 567776532 238999999999988753
No 88
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.71 E-value=2.1 Score=37.77 Aligned_cols=100 Identities=8% Similarity=0.091 Sum_probs=51.7
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEec-CCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
+++.++.|+.++ .+.+||+.+.+-.. +.....+. .+++. -++++++.|+.++ .+..||..
T Consensus 175 dg~~lasg~~dg------~i~iwd~~~~~~~~~~~~h~~~v----~~l~~spd~~~l~s~s~dg--------~i~iwd~~ 236 (321)
T 3ow8_A 175 DGKYLASGAIDG------IINIFDIATGKLLHTLEGHAMPI----RSLTFSPDSQLLVTASDDG--------YIKIYDVQ 236 (321)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEECCCSSCC----CEEEECTTSCEEEEECTTS--------CEEEEETT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEEcccCCce----eEEEEcCCCCEEEEEcCCC--------eEEEEECC
Confidence 557777777642 47889998775432 22111111 12333 3566777776543 37788887
Q ss_pred CCcEEeCCCCCCCCcccEEEEE-CCEEEEEccCCCCCCCCCccceEe
Q 016877 199 TKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 199 ~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
+......-.- ....-.+++.. +++.++.|+.++ .+..|++
T Consensus 237 ~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~-----~v~iwd~ 277 (321)
T 3ow8_A 237 HANLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDK-----SVKVWDV 277 (321)
T ss_dssp TCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CcceeEEEcC-CCCceEEEEECCCCCEEEEEeCCC-----cEEEEeC
Confidence 7654321111 11111222222 566777776543 4566653
No 89
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.71 E-value=2 Score=38.53 Aligned_cols=141 Identities=4% Similarity=-0.138 Sum_probs=67.0
Q ss_pred EEEEecCCCCCcccceeeeeeCCCce-e-eecC-CCCCCCceeEEe--eecccccccccCcceEeecCCCCCeEEccCCC
Q 016877 35 FFWASSSKFTSSYLNIASNWSPYHNS-I-ILPN-NGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 35 ~ly~~GG~~~~~~~~~~~~~d~~~~~-~-~~p~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
.+++.|+.++ .+..||..+.. . .+.. .....-..+... .+...... .....+..+|..+.....+....
T Consensus 87 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~ 160 (383)
T 3ei3_B 87 TTVAVGSKGG-----DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS-SIRGATTLRDFSGSVIQVFAKTD 160 (383)
T ss_dssp TEEEEEEBTS-----CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE-ETTTEEEEEETTSCEEEEEECCC
T ss_pred CEEEEEcCCC-----eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE-eCCCEEEEEECCCCceEEEeccC
Confidence 5677776554 67889998776 3 2321 111111122211 11111111 12335667777765554443322
Q ss_pred CCCCCceE-E-EECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCE-EEEEcCCCCCCC
Q 016877 110 VPRLDGAA-I-QIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRY-IYVVTGQYGPQC 185 (381)
Q Consensus 110 ~~r~~~~~-~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~~~~~ 185 (381)
.......+ + .-++.+++.|+.+ ..+.+||+....-..+..... .-.+++.. ++. +++.|+.+
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~d---- 226 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHKA----KVTHAEFNPRCDWLMATSSVD---- 226 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSSS----CEEEEEECSSCTTEEEEEETT----
T ss_pred CCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCCC----cEEEEEECCCCCCEEEEEeCC----
Confidence 11111222 2 2255677777654 358888886544443322111 12233333 333 66666643
Q ss_pred CCCcceEEEEECCC
Q 016877 186 RGPTAHTFVLDTET 199 (381)
Q Consensus 186 ~~~~~~~~~yd~~~ 199 (381)
..+..||..+
T Consensus 227 ----~~i~iwd~~~ 236 (383)
T 3ei3_B 227 ----ATVKLWDLRN 236 (383)
T ss_dssp ----SEEEEEEGGG
T ss_pred ----CEEEEEeCCC
Confidence 3477888876
No 90
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.68 E-value=1.9 Score=39.01 Aligned_cols=98 Identities=8% Similarity=0.027 Sum_probs=48.5
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCC---ccceEEEEEeC--CEEEEEcCCCCCCCCCCcceEEEEE
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM---AHSHLGMVTDG--RYIYVVTGQYGPQCRGPTAHTFVLD 196 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~---~r~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~~yd 196 (381)
+.+++.|+.+ ..+.+||+.+.+-...-..+.+. ...-.+++... ..+++.|+.++. ...+..||
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-----~~~i~~~d 246 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN-----DPSILIWD 246 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS-----SCCCCEEE
T ss_pred CcEEEEEcCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC-----CceEEEEe
Confidence 4677777754 24888999887654432222100 11223344433 246777664431 12477888
Q ss_pred CCCCcEEeCCCCC--CCCcccEEEEE--CCEEEEEccCC
Q 016877 197 TETKKWQDLPPLP--VPRYAPATQLW--RGRLHVMGGSG 231 (381)
Q Consensus 197 ~~~~~W~~~~~~p--~~r~~~~~~~~--~~~lyv~GG~~ 231 (381)
..+.. ..+..+. ....-.+++.. ++++++.|+.+
T Consensus 247 ~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 284 (416)
T 2pm9_A 247 LRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD 284 (416)
T ss_dssp TTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS
T ss_pred CCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCC
Confidence 88743 1111222 11222233332 56677777654
No 91
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.66 E-value=1.1 Score=43.24 Aligned_cols=58 Identities=9% Similarity=-0.093 Sum_probs=30.7
Q ss_pred CEEEEEcCC-CCCCCCCCcceEEEEECCCCcEEeCCCCCCCCccc-EEEE-ECCEEEEEccCCCCCCCCCccceE
Q 016877 172 RYIYVVTGQ-YGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAP-ATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (381)
Q Consensus 172 ~~iyv~GG~-~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~ 243 (381)
++.++.|+. + ..+..||..+..... ..+......- +++. -++++++.|+.++ .+..|+
T Consensus 456 ~~~l~~~~~~d--------~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg-----~i~iw~ 516 (615)
T 1pgu_A 456 QNYVAVGLEEG--------NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMG-----KILLYD 516 (615)
T ss_dssp SSEEEEEETTT--------SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CCEEEEeecCC--------CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCC-----eEEEee
Confidence 555666653 3 348889998876643 2222111112 2222 2677777777543 355565
No 92
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.64 E-value=1.5 Score=44.32 Aligned_cols=161 Identities=7% Similarity=0.025 Sum_probs=81.7
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCC-CC-ccceE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR-EM-AHSHL 165 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~~-~r~~~ 165 (381)
.-+.+||+.+.+++.......+.....+... ++.|++... .-+.+||+.+++|+.....+. +. ...-.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 498 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVR 498 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEE
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeE
Confidence 3567888888887776532111112222222 457776432 238899999988876543221 00 11122
Q ss_pred EEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC---CCCCCcccEEEE-ECCEEEEEccCCCCCCCCCcc
Q 016877 166 GMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP---LPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVD 240 (381)
Q Consensus 166 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~ 240 (381)
+++. .++.|++-.-. .-+++||+.+.+++.... ++... -.+++. .++.|++... .+ .
T Consensus 499 ~i~~d~~g~lWigt~~---------~Gl~~~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~T~-~G------l- 560 (781)
T 3v9f_A 499 SIAQDSEGRFWIGTFG---------GGVGIYTPDMQLVRKFNQYEGFCSNT-INQIYRSSKGQMWLATG-EG------L- 560 (781)
T ss_dssp EEEECTTCCEEEEESS---------SCEEEECTTCCEEEEECTTTTCSCSC-EEEEEECTTSCEEEEET-TE------E-
T ss_pred EEEEcCCCCEEEEEcC---------CCEEEEeCCCCeEEEccCCCCCCCCe-eEEEEECCCCCEEEEEC-CC------c-
Confidence 2322 35678875311 238899999998887653 22111 112222 2466776532 11 0
Q ss_pred ceEeeeecCCccCCceEEec---CCCCCCcceeEEEe-CCEEEEEc
Q 016877 241 HWSLAVKDGKPLEKEWRTEI---PIPRGGPHRACVVV-DDRLLVIG 282 (381)
Q Consensus 241 ~~~~~~~~~~~~~~~W~~~~---~~p~~~~~~~~~~~-~~~l~v~G 282 (381)
++.||+.+.+++... .+|..... +++.. +++|++.+
T Consensus 561 -----v~~~d~~~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 561 -----VCFPSARNFDYQVFQRKEGLPNTHIR-AISEDKNGNIWAST 600 (781)
T ss_dssp -----EEESCTTTCCCEEECGGGTCSCCCCC-EEEECSSSCEEEEC
T ss_pred -----eEEECCCCCcEEEccccCCCCCceEE-EEEECCCCCEEEEc
Confidence 133456666665542 34443332 33333 56787754
No 93
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.64 E-value=0.49 Score=41.65 Aligned_cols=122 Identities=7% Similarity=-0.012 Sum_probs=61.6
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEE-ECC-EEEEEecCCCCCCcccceEEEeCCCCeE-e-cCCCCCCCCccceE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQ-IKN-LLYVFAGYGSIDYVHSHVDIYNFTDNTW-G-GRFDMPREMAHSHL 165 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~-~~~~~~~~~~r~~~ 165 (381)
..+..+|..+.+.......+.. ...++. -++ .+|+.+..+ ..++++|+.+.+- . .+.....| +...
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~--~~~~ 89 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYD--FVDTAITSDCSNVVVTSDFC------QTLVQIETQLEPPKVVAIQEGQSS--MADV 89 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCC--EEEEEECSSSCEEEEEESTT------CEEEEEECSSSSCEEEEEEECSSC--CCCE
T ss_pred CeEEEEeCcccceeeeEEccCC--cceEEEcCCCCEEEEEeCCC------CeEEEEECCCCceeEEecccCCCC--ccce
Confidence 4678888888877554443321 123332 244 577776532 3689999988764 2 22221221 1112
Q ss_pred EEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CC-EEEEEcc
Q 016877 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RG-RLHVMGG 229 (381)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG 229 (381)
+..-.++.+| .+...+ ....+.+||+++.+-... ++.....+.++.. ++ .+|+.+.
T Consensus 90 ~~s~dg~~l~-~~~~~~-----~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 90 DITPDDQFAV-TVTGLN-----HPFNMQSYSFLKNKFIST--IPIPYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp EECTTSSEEE-ECCCSS-----SSCEEEEEETTTTEEEEE--EECCTTEEEEEECTTSSCEEEEEE
T ss_pred EECCCCCEEE-EecCCC-----CcccEEEEECCCCCeEEE--EECCCCccceEECCCCCEEEEEec
Confidence 2222344666 432111 013799999998775443 2222222344443 34 4777754
No 94
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.58 E-value=2.6 Score=38.27 Aligned_cols=104 Identities=5% Similarity=-0.095 Sum_probs=48.0
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEeee-cccccccccCcceEeecCCCCCeEEccCCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTK-KDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p~ 110 (381)
++.++++|+.++ .+..||..+.. ..........-..+..... .....+ .....+..+|..+.+-. ..+..
T Consensus 108 ~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~~--~~~~~ 179 (420)
T 3vl1_A 108 QMRRFILGTTEG-----DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISS-SQDMQLKIWSVKDGSNP--RTLIG 179 (420)
T ss_dssp SSCEEEEEETTS-----CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCCC--EEEEC
T ss_pred CCCEEEEEECCC-----CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEE-eCCCeEEEEeCCCCcCc--eEEcC
Confidence 566777777554 67888988777 3332211111111111100 011111 12235667776654321 11111
Q ss_pred CCCCc-eEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeE
Q 016877 111 PRLDG-AAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTW 150 (381)
Q Consensus 111 ~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 150 (381)
..... +++.. ++..++.|+.++ .+.+||+.+.+-
T Consensus 180 h~~~v~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~ 215 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVLSASLDG------TIRLWECGTGTT 215 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTS------CEEEEETTTTEE
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCC------cEEEeECCCCce
Confidence 11111 22222 456666776542 477888887653
No 95
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.54 E-value=1.7 Score=38.38 Aligned_cols=104 Identities=11% Similarity=0.122 Sum_probs=45.9
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCC-----eEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEE
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN-----TWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFV 194 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~-----~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 194 (381)
++.+++.|+.++ .+.++|.... ++..+..+... ...-.+++.. +++.++.|+.++ .+..
T Consensus 69 ~~~~las~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~g~~las~s~D~--------~v~i 133 (330)
T 2hes_X 69 HTSLLAAGSFDS------TVSIWAKEESADRTFEMDLLAIIEGH-ENEVKGVAWSNDGYYLATCSRDK--------SVWI 133 (330)
T ss_dssp TSSEEEEEETTS------CEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTS--------CEEE
T ss_pred CCCEEEEEeCCC------cEEEEEcccCcCccccceeEEEEcCC-CCcEEEEEECCCCCEEEEEeCCC--------EEEE
Confidence 456777777653 3666776432 12222112110 0111223332 456666766543 3677
Q ss_pred EECCC--CcEEeCCCCCCC-CcccEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 195 LDTET--KKWQDLPPLPVP-RYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 195 yd~~~--~~W~~~~~~p~~-r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
+|..+ ..++.+..+... ..-.+++. -++.+++.|+.++ .+..|+.
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~iW~~ 182 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-----TVRIWKD 182 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEE
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEC
Confidence 78742 234333222211 11112222 2556777777543 4667764
No 96
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.42 E-value=2.4 Score=37.27 Aligned_cols=152 Identities=12% Similarity=0.098 Sum_probs=72.4
Q ss_pred CEEEEecCCC-CCcccceeeeeeCCCce--eeecCCCCCCCceeEEeee-cccccccccCcceEeecCCCCCeEEccCCC
Q 016877 34 DFFWASSSKF-TSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTK-KDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 34 ~~ly~~GG~~-~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
+.+|+..... ....-+.+..||+.+.+ ..++.........+..-++ .+... .....+..+|+.+.+-...-+.+
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~--~~~~~v~~~d~~~~~~~~~~~~~ 130 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGN--TVNSAVTAIDAKTGEVKGRLVLD 130 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEE--TTTTEEEEEETTTCCEEEEEESC
T ss_pred CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEe--cCCCEEEEEeCCCCeeEEEEecC
Confidence 4777766321 11124578999998887 3333211111111111111 12211 12346888888877643322222
Q ss_pred CCC--------CCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcC
Q 016877 110 VPR--------LDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTG 179 (381)
Q Consensus 110 ~~r--------~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG 179 (381)
... .-..++.. ++++|+.+... ...++++|+.+.+-...-+...... ......-.++.+|+...
T Consensus 131 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 131 DRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQNTGKMS-TGLALDSEGKRLYTTNA 204 (353)
T ss_dssp CCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECCCCTTC-CCCEEETTTTEEEEECT
T ss_pred CCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecCCCCcc-ceEEECCCCCEEEEEcC
Confidence 111 01223332 34677776322 1358999998776443222111101 11222224556777643
Q ss_pred CCCCCCCCCcceEEEEECCCCcE
Q 016877 180 QYGPQCRGPTAHTFVLDTETKKW 202 (381)
Q Consensus 180 ~~~~~~~~~~~~~~~yd~~~~~W 202 (381)
...+..+|+.+.+-
T Consensus 205 ---------~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 205 ---------DGELITIDTADNKI 218 (353)
T ss_dssp ---------TSEEEEEETTTTEE
T ss_pred ---------CCeEEEEECCCCeE
Confidence 24688999988764
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.42 E-value=1.5 Score=38.70 Aligned_cols=103 Identities=5% Similarity=-0.072 Sum_probs=51.2
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCCCCccceEEEEE-----eCCEEEEEcCCCCCCCCCCcceEE
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVT-----DGRYIYVVTGQYGPQCRGPTAHTF 193 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~-----~~~~iyv~GG~~~~~~~~~~~~~~ 193 (381)
++..++.|+.+ ..+.+||+.+.+ ...+........+.-.+++. .++.+++.|+.+ ..+.
T Consensus 128 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d--------~~i~ 193 (357)
T 3i2n_A 128 GAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN--------GDIK 193 (357)
T ss_dssp CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT--------SEEE
T ss_pred CccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC--------CeEE
Confidence 45566777654 247788888764 23232222111112222331 355666666533 3588
Q ss_pred EEECCCCcEEeCCCCCCCCcccEEEEE----CCEEEEEccCCCCCCCCCccceEe
Q 016877 194 VLDTETKKWQDLPPLPVPRYAPATQLW----RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 194 ~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
.||..+.+-...... ...-.+++.. ++..++.|+.++ .+..|++
T Consensus 194 i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~ 241 (357)
T 3i2n_A 194 LFDLRNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLEG-----KFHVFDM 241 (357)
T ss_dssp EEETTTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEESTT-----EEEEEEE
T ss_pred EEECccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCCC-----eEEEEeC
Confidence 899988764322111 1222333333 456677766443 4555654
No 98
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.36 E-value=1.3 Score=38.31 Aligned_cols=88 Identities=13% Similarity=0.072 Sum_probs=47.4
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
.+++++.|..+ ..+.++|.++.+ |+.-..-. ...+...+.-++++++.+ .+.+..||+.
T Consensus 4 ~~~~lv~~~~~------~~v~~~d~~tG~~~w~~~~~~~---~~~~~~~~~pdG~ilvs~----------~~~V~~~d~~ 64 (276)
T 3no2_A 4 PQHLLVGGSGW------NKIAIINKDTKEIVWEYPLEKG---WECNSVAATKAGEILFSY----------SKGAKMITRD 64 (276)
T ss_dssp CCEEEEECTTC------SEEEEEETTTTEEEEEEECCTT---CCCCEEEECTTSCEEEEC----------BSEEEEECTT
T ss_pred CCcEEEeeCCC------CEEEEEECCCCeEEEEeCCCcc---CCCcCeEECCCCCEEEeC----------CCCEEEECCC
Confidence 45777776543 458889987775 77543211 122344455677888732 2458899983
Q ss_pred C-CcEEeCCCCCCCCcccEEEE-ECCEEEEEcc
Q 016877 199 T-KKWQDLPPLPVPRYAPATQL-WRGRLHVMGG 229 (381)
Q Consensus 199 ~-~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG 229 (381)
- ..|+.-.+ .....+++.. .++++++...
T Consensus 65 G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 65 GRELWNIAAP--AGCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp SCEEEEEECC--TTCEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEcCC--CCccccccEECCCCCEEEEec
Confidence 2 23765432 1112233333 3566666643
No 99
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.34 E-value=1.1 Score=39.58 Aligned_cols=23 Identities=26% Similarity=0.210 Sum_probs=16.4
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS 60 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (381)
++.+.+.|+.++ .+..||..+++
T Consensus 43 ~~~~l~~~~~dg-----~i~vwd~~~~~ 65 (369)
T 3zwl_B 43 EGDLLFSCSKDS-----SASVWYSLNGE 65 (369)
T ss_dssp TSCEEEEEESSS-----CEEEEETTTCC
T ss_pred CCCEEEEEeCCC-----EEEEEeCCCch
Confidence 566677776555 67889988777
No 100
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.27 E-value=2.7 Score=37.27 Aligned_cols=203 Identities=13% Similarity=0.109 Sum_probs=98.7
Q ss_pred eEeecCCCCCeEEccC-CCCCCCC-ceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCC-CCCccceEEEE
Q 016877 92 FQDLPAPELKWEKMKA-APVPRLD-GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMP-REMAHSHLGMV 168 (381)
Q Consensus 92 ~~~~~~~~~~W~~l~~-~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~~~r~~~~~~ 168 (381)
+++..-...+|+++.. .+.+... .++...++.+|++|-. ..+++-+-.-.+|+.+.... .| .......+
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~-~~~~~i~~ 129 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLP-GSPRLIKA 129 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET-------TEEEEESSTTSSCEECCCCTTCS-SCEEEEEE
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC-------CeEEEECCCCCCceECccccCCC-CCeEEEEE
Confidence 4444434568998753 2222322 3344446788887621 12443333356899986432 12 12222233
Q ss_pred EeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CCEEEEEccCCCCCCCCCccceEeeee
Q 016877 169 TDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSLAVK 247 (381)
Q Consensus 169 ~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~ 247 (381)
..++.+|+.|.. ..+++-+-.-.+|+.+.... +...+.++.. ++.++++|- .+ ..|...
T Consensus 130 ~~~~~~~~~~~~---------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~G-------~~~~S~-- 189 (327)
T 2xbg_A 130 LGNGSAEMITNV---------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSS-RG-------SFYSTW-- 189 (327)
T ss_dssp EETTEEEEEETT---------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEET-TS-------SEEEEE--
T ss_pred ECCCCEEEEeCC---------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEEC-CC-------cEEEEe--
Confidence 457888888741 12555444456899886422 2233444443 456666652 21 222211
Q ss_pred cCCccCCceEEecCCCCCCcceeEEE-eCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEe-C-CCCCeEEcCC
Q 016877 248 DGKPLEKEWRTEIPIPRGGPHRACVV-VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYML-D-DEMKWKVLPS 324 (381)
Q Consensus 248 ~~~~~~~~W~~~~~~p~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y-d-~~~~W~~i~~ 324 (381)
|....+|+.+....... ...++. -++++|+.+.. + .++.. + ...+|+.+..
T Consensus 190 --d~gG~tW~~~~~~~~~~-~~~~~~~~~g~~~~~~~~-G----------------------~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 190 --EPGQTAWEPHNRTTSRR-LHNMGFTPDGRLWMIVNG-G----------------------KIAFSDPDNSENWGELLS 243 (327)
T ss_dssp --CTTCSSCEEEECCSSSC-EEEEEECTTSCEEEEETT-T----------------------EEEEEETTEEEEECCCBC
T ss_pred --CCCCCceeECCCCCCCc-cceeEECCCCCEEEEeCC-c----------------------eEEEecCCCCCeeEeccC
Confidence 22246888774322222 223332 35678876532 1 14554 2 3668988753
Q ss_pred CCCCCCCcceEEEEE-CCEEEEEcc
Q 016877 325 MPKPDSHIEFAWVLV-NNSIVIVGG 348 (381)
Q Consensus 325 ~~~~~~~~~~~~~~~-~~~l~v~GG 348 (381)
.+.+....-.+++.. ++.+|++|+
T Consensus 244 ~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 244 PLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp TTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CcccCCcceEEEEecCCCEEEEEeC
Confidence 211221111222222 578888875
No 101
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.17 E-value=2.6 Score=36.79 Aligned_cols=128 Identities=8% Similarity=0.006 Sum_probs=62.5
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEe--ee-cccccccccCcceEeecCCCCCe-E-Ec
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVK--TK-KDVVPKRILPATFQDLPAPELKW-E-KM 105 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~W-~-~l 105 (381)
.+.+|+....++ .+..||+.+++ ..++... ... +++.. +. .+... .....++.+|..+.+- . .+
T Consensus 9 ~~~~~v~~~~~~-----~v~~~d~~~~~~~~~~~~~~-~~~-~~~~s~dg~~l~~~~--~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 9 SNFGIVVEQHLR-----RISFFSTDTLEILNQITLGY-DFV-DTAITSDCSNVVVTS--DFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp CCEEEEEEGGGT-----EEEEEETTTCCEEEEEECCC-CEE-EEEECSSSCEEEEEE--STTCEEEEEECSSSSCEEEEE
T ss_pred CCEEEEEecCCC-----eEEEEeCcccceeeeEEccC-Ccc-eEEEcCCCCEEEEEe--CCCCeEEEEECCCCceeEEec
Confidence 578888876433 78999999887 3333211 111 22211 11 12111 1233688888887764 2 22
Q ss_pred cCCCCCCCCceEEEE-CC-EEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CC-EEEEEcC
Q 016877 106 KAAPVPRLDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR-YIYVVTG 179 (381)
Q Consensus 106 ~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~-~iyv~GG 179 (381)
..-..++ ++++.. ++ .+| .+...+. ...+.++|+.+.+-...-+... ..+.++.. ++ .+|+.+.
T Consensus 80 ~~~~~~~--~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 80 QEGQSSM--ADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPIPY----DAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp EECSSCC--CCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEECCT----TEEEEEECTTSSCEEEEEE
T ss_pred ccCCCCc--cceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEECCC----CccceEECCCCCEEEEEec
Confidence 2222222 212222 33 566 3322211 1258999999887655322221 12344443 33 5787654
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.15 E-value=0.7 Score=41.73 Aligned_cols=92 Identities=11% Similarity=0.078 Sum_probs=44.2
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE----CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI----KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHL 165 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~ 165 (381)
..+..+|..+.+-......+.+. ..+... ++.+++.|+.+ ..+.+||+.+.+-... +... ...-.
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~~~~~--~~~~-~~~v~ 190 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETV--YSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGSCSHI--LQGH-RQEIL 190 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCE--EEEEECSSCSSCCEEEEEESS------SSEEEEESSSSCCCEE--ECCC-CSCEE
T ss_pred CeEEEeeCCCCccceeccCCCce--eeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCcceeee--ecCC-CCcEE
Confidence 45777777766543332222211 112111 33467777654 2478888876542221 1110 01122
Q ss_pred EEEEe-C-CEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 166 GMVTD-G-RYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 166 ~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
+++.. + ..+++.|+.++ .+..||..+.
T Consensus 191 ~~~~~~~~~~ll~~~~~dg--------~i~i~d~~~~ 219 (408)
T 4a11_B 191 AVSWSPRYDYILATASADS--------RVKLWDVRRA 219 (408)
T ss_dssp EEEECSSCTTEEEEEETTS--------CEEEEETTCS
T ss_pred EEEECCCCCcEEEEEcCCC--------cEEEEECCCC
Confidence 33333 2 33677776543 3777887654
No 103
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.14 E-value=2.1 Score=38.45 Aligned_cols=21 Identities=19% Similarity=0.033 Sum_probs=14.2
Q ss_pred EEEEecCCCCCcccceeeeeeCCCce
Q 016877 35 FFWASSSKFTSSYLNIASNWSPYHNS 60 (381)
Q Consensus 35 ~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (381)
.+++.|+.++ .+..||..+..
T Consensus 27 ~~l~s~~~dg-----~i~iw~~~~~~ 47 (397)
T 1sq9_A 27 SFTVSCSGDG-----YLKVWDNKLLD 47 (397)
T ss_dssp SEEEEEETTS-----EEEEEESBCCT
T ss_pred CeEEEEcCCC-----EEEEEECCCcc
Confidence 5667776555 67788887654
No 104
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.13 E-value=2.9 Score=37.08 Aligned_cols=198 Identities=12% Similarity=0.128 Sum_probs=97.6
Q ss_pred eEeecCCCCCeEEccCCCCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCC-CCCccceEEEEE
Q 016877 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMP-REMAHSHLGMVT 169 (381)
Q Consensus 92 ~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~~~r~~~~~~~ 169 (381)
+++-.-...+|+.+. .|......++... .+.+|++|- . ..+++-.-.-.+|+.+.... .+ ......+..
T Consensus 17 ~~~s~d~g~~W~~~~-~~~~~~~~~v~~~~~~~~~~~G~-~------g~i~~s~DgG~tW~~~~~~~~~~-~~~~~~i~~ 87 (327)
T 2xbg_A 17 SAIPALDYNPWEAIQ-LPTTATILDMSFIDRHHGWLVGV-N------ATLMETRDGGQTWEPRTLVLDHS-DYRFNSVSF 87 (327)
T ss_dssp -CCCBCSSCCEEEEE-CSCSSCEEEEEESSSSCEEEEET-T------TEEEEESSTTSSCEECCCCCSCC-CCEEEEEEE
T ss_pred eeecCCCCCCceEee-cCCCCcEEEEEECCCCcEEEEcC-C------CeEEEeCCCCCCCeECCCCCCCC-CccEEEEEe
Confidence 334344556898875 3333322333333 457888653 1 12444333346899985321 21 122344555
Q ss_pred eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCC-CCCcccEEE-EECCEEEEEccCCCCCCCCCccceEeeee
Q 016877 170 DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP-VPRYAPATQ-LWRGRLHVMGGSGENRYTPEVDHWSLAVK 247 (381)
Q Consensus 170 ~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 247 (381)
.++.+|+.|- . ..+++-+-.-.+|+.+.... .+.....++ .-++.+|+.+.. + ..|..
T Consensus 88 ~~~~~~~~g~-~--------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-g-------~v~~S--- 147 (327)
T 2xbg_A 88 QGNEGWIVGE-P--------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV-G-------AIYRT--- 147 (327)
T ss_dssp ETTEEEEEEE-T--------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT-C-------CEEEE---
T ss_pred cCCeEEEEEC-C--------CeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC-c-------cEEEE---
Confidence 6788998752 1 23444333457899987432 222223333 346788887641 1 12221
Q ss_pred cCCccCCceEEecCCCCCCcceeEEEe-CCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-C-CCCeEEcCC
Q 016877 248 DGKPLEKEWRTEIPIPRGGPHRACVVV-DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-D-EMKWKVLPS 324 (381)
Q Consensus 248 ~~~~~~~~W~~~~~~p~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~-~~~W~~i~~ 324 (381)
+..-.+|+.+....... ...++.. +++++++|- .+ .+|.-+ . ..+|+.+..
T Consensus 148 --~DgG~tW~~~~~~~~~~-~~~~~~~~~~~~~~~g~-~G----------------------~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 148 --KDSGKNWQALVQEAIGV-MRNLNRSPSGEYVAVSS-RG----------------------SFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp --SSTTSSEEEEECSCCCC-EEEEEECTTSCEEEEET-TS----------------------SEEEEECTTCSSCEEEEC
T ss_pred --cCCCCCCEEeecCCCcc-eEEEEEcCCCcEEEEEC-CC----------------------cEEEEeCCCCCceeECCC
Confidence 12356798875422222 2233333 556666552 21 255553 3 689998854
Q ss_pred CCCCCCCcceEEE-EECCEEEEEc
Q 016877 325 MPKPDSHIEFAWV-LVNNSIVIVG 347 (381)
Q Consensus 325 ~~~~~~~~~~~~~-~~~~~l~v~G 347 (381)
+.+... ..++ ..++.+|+++
T Consensus 202 -~~~~~~--~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 202 -TTSRRL--HNMGFTPDGRLWMIV 222 (327)
T ss_dssp -CSSSCE--EEEEECTTSCEEEEE
T ss_pred -CCCCcc--ceeEECCCCCEEEEe
Confidence 222222 2222 2356677665
No 105
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.08 E-value=0.84 Score=44.01 Aligned_cols=100 Identities=7% Similarity=-0.064 Sum_probs=51.3
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEe--ee-cccccccccCcceEeecC--CCCCeEEc
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVK--TK-KDVVPKRILPATFQDLPA--PELKWEKM 105 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~--~~~~W~~l 105 (381)
++.+|+.+..++ .+..||..+++ ..++.... .+++... +. .+..... ..+..+|. .+.+ .+
T Consensus 148 ~~~~~vs~~~d~-----~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~t~~--~~ 215 (543)
T 1nir_A 148 PNLFSVTLRDAG-----QIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRD---ARIDMIDLWAKEPT--KV 215 (543)
T ss_dssp GGEEEEEEGGGT-----EEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETT---SEEEEEETTSSSCE--EE
T ss_pred CCEEEEEEcCCC-----eEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCC---CeEEEEECcCCCCc--EE
Confidence 778888876433 77889999887 44443111 2333221 11 2222222 57888888 4443 23
Q ss_pred cCCCCCCCCceEEEE-----CC-EEEEEecCCCCCCcccceEEEeCCCCeE
Q 016877 106 KAAPVPRLDGAAIQI-----KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTW 150 (381)
Q Consensus 106 ~~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W 150 (381)
..++....-..++.. ++ .+|+..-. ...+.++|..+.+-
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLEP 260 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCCE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEcc------CCeEEEEecccccc
Confidence 333322221223332 44 56554422 23577888877653
No 106
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.92 E-value=0.78 Score=48.83 Aligned_cols=92 Identities=9% Similarity=-0.022 Sum_probs=46.2
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecC-CCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR-FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++..+++|+.+ ..+.+||..+.+.... .....+ -......-+++..+.|+.++ .+..||..+
T Consensus 972 ~g~~l~~g~~~------g~i~i~d~~~~~~~~~~~~h~~~---v~~l~~s~dg~~l~s~~~dg--------~i~vwd~~~ 1034 (1249)
T 3sfz_A 972 HLEYVAFGDED------GAIKIIELPNNRVFSSGVGHKKA---VRHIQFTADGKTLISSSEDS--------VIQVWNWQT 1034 (1249)
T ss_dssp TSSEEEEEETT------SCCEEEETTTTSCEEECCCCSSC---CCCEEECSSSSCEEEECSSS--------BEEEEETTT
T ss_pred CCCEEEEEcCC------CCEEEEEcCCCceeeecccCCCc---eEEEEECCCCCEEEEEcCCC--------EEEEEECCC
Confidence 45666666654 2477888877653332 111111 11112223556666666433 478899998
Q ss_pred CcEEeCCCCCCCCcccEEEEECCEEEEEccCC
Q 016877 200 KKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (381)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 231 (381)
......... ...-.++....+..++.++.+
T Consensus 1035 ~~~~~~~~~--~~~v~~~~~~~~~~l~~~~~d 1064 (1249)
T 3sfz_A 1035 GDYVFLQAH--QETVKDFRLLQDSRLLSWSFD 1064 (1249)
T ss_dssp TEEECCBCC--SSCEEEEEECSSSEEEEEESS
T ss_pred CceEEEecC--CCcEEEEEEcCCCcEEEEECC
Confidence 876644322 222223333344445555543
No 107
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.77 E-value=2.7 Score=38.22 Aligned_cols=133 Identities=11% Similarity=-0.037 Sum_probs=64.8
Q ss_pred CcceEeecCCCCCeEEccCCCCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
...+..+|..+.+............-.+++.. ++.++++|+.+ ..+.+||..+.+-...-.... ..-.++
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~---~~v~~~ 182 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQTKLRTMAGHQ---ARVGCL 182 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCCS---SCEEEE
T ss_pred CCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCCeEEEEecCCC---CceEEE
Confidence 44677888887776554443322211222222 55677777654 247888988765433211111 112233
Q ss_pred EEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CCEEEEEccCCCCCCCCCccceEe
Q 016877 168 VTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 168 ~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
.. ++.+++.|+.+ ..+..||..+..-....-......-.++... ++.+++.|+.++ .+..|++
T Consensus 183 ~~-~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~ 246 (401)
T 4aez_A 183 SW-NRHVLSSGSRS--------GAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDA 246 (401)
T ss_dssp EE-ETTEEEEEETT--------SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred EE-CCCEEEEEcCC--------CCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccC
Confidence 33 45566666543 3578888874321110000111111222222 566777776543 4555653
No 108
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.70 E-value=0.92 Score=42.01 Aligned_cols=144 Identities=7% Similarity=-0.082 Sum_probs=67.3
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCC-CceeEEe--eecccccccccCcceEeecCCCCCeEEccC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQK-GENIGVK--TKKDVVPKRILPATFQDLPAPELKWEKMKA 107 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~ 107 (381)
++.+.+.|+.++ .+..||..+.. ..+....+.. -.++.-. .+.....+ .....+..+|..++....+..
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~-s~D~~v~iwd~~~~~~~~~~~ 204 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYAS-SMEGTTRLQDFKGNILRVFAS 204 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEE-CSSSCEEEEETTSCEEEEEEC
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEE-eCCCEEEEeeccCCceeEEec
Confidence 556778887666 67889987766 2222211111 1111111 11111111 122356677776655443332
Q ss_pred CCCCCC-CceEE-EECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe--CCEEEEEcCCCCC
Q 016877 108 APVPRL-DGAAI-QIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGP 183 (381)
Q Consensus 108 ~p~~r~-~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~ 183 (381)
...... ..++. .-++.+++.|+.++ .+.++|.....-..+.... ..-.+++.. ++.+++.|+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~~~~~~~~~~h~----~~v~~v~~~p~~~~~~~s~s~d~- 273 (435)
T 4e54_B 205 SDTINIWFCSLDVSASSRMVVTGDNVG------NVILLNMDGKELWNLRMHK----KKVTHVALNPCCDWFLATASVDQ- 273 (435)
T ss_dssp CSSCSCCCCCEEEETTTTEEEEECSSS------BEEEEESSSCBCCCSBCCS----SCEEEEEECTTCSSEEEEEETTS-
T ss_pred cCCCCccEEEEEECCCCCEEEEEeCCC------cEeeeccCcceeEEEeccc----ceEEeeeecCCCceEEEEecCcc-
Confidence 222111 12222 23567778887642 4778888654322221111 111233332 344666776544
Q ss_pred CCCCCcceEEEEECCCC
Q 016877 184 QCRGPTAHTFVLDTETK 200 (381)
Q Consensus 184 ~~~~~~~~~~~yd~~~~ 200 (381)
.+..||..+.
T Consensus 274 -------~v~iwd~~~~ 283 (435)
T 4e54_B 274 -------TVKIWDLRQV 283 (435)
T ss_dssp -------BCCEEETTTC
T ss_pred -------eeeEEecccc
Confidence 2556787654
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.63 E-value=3.5 Score=39.52 Aligned_cols=101 Identities=9% Similarity=0.106 Sum_probs=46.3
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CC-EEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR-YIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
+++.+++++.+... ...++.+|... .-..+.... ..-.+++.. ++ .+++.|+.+ ..+..||..
T Consensus 127 ~~~~l~~~~~~~~~--~~~v~~~d~~~-~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~~d--------~~v~vwd~~ 191 (615)
T 1pgu_A 127 EGRRLCVVGEGRDN--FGVFISWDSGN-SLGEVSGHS----QRINACHLKQSRPMRSMTVGDD--------GSVVFYQGP 191 (615)
T ss_dssp TSSEEEEEECCSSC--SEEEEETTTCC-EEEECCSCS----SCEEEEEECSSSSCEEEEEETT--------TEEEEEETT
T ss_pred CCCEEEEeccCCCC--ccEEEEEECCC-cceeeecCC----ccEEEEEECCCCCcEEEEEeCC--------CcEEEEeCC
Confidence 45666666654322 23577777332 222222111 112233333 23 266666543 357788877
Q ss_pred CCcEEeCCCCCC-CC---cccEEEEE-C-CEEEEEccCCCCCCCCCccceE
Q 016877 199 TKKWQDLPPLPV-PR---YAPATQLW-R-GRLHVMGGSGENRYTPEVDHWS 243 (381)
Q Consensus 199 ~~~W~~~~~~p~-~r---~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~ 243 (381)
+.+-.. .+.. .. .-.+++.. + +++++.|+.++ .+..|+
T Consensus 192 ~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd 235 (615)
T 1pgu_A 192 PFKFSA--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFD 235 (615)
T ss_dssp TBEEEE--EECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEE
T ss_pred Ccceee--eecccCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEE
Confidence 654322 1221 11 22233333 4 56777776543 355565
No 110
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.62 E-value=0.36 Score=43.28 Aligned_cols=96 Identities=11% Similarity=0.101 Sum_probs=46.8
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCC--CCCcccEEEE-ECCEEEEEccCCCCCCCCCccceEeeee
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP--VPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVK 247 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 247 (381)
++++++.||.++ .+..+|.++..|.....+. ....-.+++. -++++++.|+.++ .+..|+..
T Consensus 27 ~g~~las~~~D~--------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~-- 91 (345)
T 3fm0_A 27 AGTLLASCGGDR--------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKN-- 91 (345)
T ss_dssp TSSCEEEEETTS--------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEEC--
T ss_pred CCCEEEEEcCCC--------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEcc--
Confidence 556677776544 3667787777765332111 1122222222 2566777777543 45666542
Q ss_pred cCCccCCceEEecCCCCCCcceeEEEe--CCEEEEEccCCC
Q 016877 248 DGKPLEKEWRTEIPIPRGGPHRACVVV--DDRLLVIGGQEG 286 (381)
Q Consensus 248 ~~~~~~~~W~~~~~~p~~~~~~~~~~~--~~~l~v~GG~~~ 286 (381)
+..++.+..+........++.+ ++++++.|+.++
T Consensus 92 -----~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~ 127 (345)
T 3fm0_A 92 -----QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127 (345)
T ss_dssp -----CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred -----CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC
Confidence 3333333222211111223333 567777777654
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.62 E-value=1.4 Score=40.20 Aligned_cols=96 Identities=9% Similarity=-0.053 Sum_probs=48.2
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEec-----CCCCCCCCccceEEEEEeCC--EEEEEcCCCCCCCCCCcceEE
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-----RFDMPREMAHSHLGMVTDGR--YIYVVTGQYGPQCRGPTAHTF 193 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-----~~~~~~~~~r~~~~~~~~~~--~iyv~GG~~~~~~~~~~~~~~ 193 (381)
++.+++.|+.+ ..+.+||..++.... +..+... ...-.+++...+ .+++.|+.++ .+.
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~dg--------~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCDN--------VIL 157 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEETTS--------CEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEcCCC--------EEE
Confidence 55777788754 247888888765421 1111111 111223344332 4677776443 478
Q ss_pred EEECCCCcEEeCCC-CCCCCcccEEEEE-CCEEEEEccCC
Q 016877 194 VLDTETKKWQDLPP-LPVPRYAPATQLW-RGRLHVMGGSG 231 (381)
Q Consensus 194 ~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~ 231 (381)
.||..+.+....-. ......-.+++.. ++++++.|+.+
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 197 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD 197 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC
Confidence 89998876533211 1122222233332 56667776644
No 112
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.56 E-value=4 Score=36.77 Aligned_cols=101 Identities=7% Similarity=0.080 Sum_probs=48.2
Q ss_pred EEEEEecCCCCCCcccceEEEeCCCCeEecCC--CCCCCCccceEEEEE--eCCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 123 LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 123 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
..++.|+.+ ..+.++|+.+.+-...- ..+......-.++.. .++.+++.|+.++ .+..||..
T Consensus 171 ~~l~s~s~D------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--------~v~~wd~~ 236 (380)
T 3iz6_a 171 TRLITGSGD------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT--------TVRLWDLR 236 (380)
T ss_dssp SCEEEECTT------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS--------CEEEEETT
T ss_pred CEEEEECCC------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC--------eEEEEECC
Confidence 445566544 34778898877644321 111110111222333 2567888887654 36778876
Q ss_pred CCc--EEeCCCCCCCCcccEEEEE-CCEEEEEccCCCCCCCCCccceEe
Q 016877 199 TKK--WQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 199 ~~~--W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
... -..+.. ....-.+++.. +++.++.|+.++ .+..|++
T Consensus 237 ~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~ 278 (380)
T 3iz6_a 237 ITSRAVRTYHG--HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDM 278 (380)
T ss_dssp TTCCCCEEECC--CSSCCCEEEECTTSSEEEEECSSS-----CEEEEET
T ss_pred CCCcceEEECC--cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEEC
Confidence 321 111111 11111233332 566777776543 4566653
No 113
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=93.52 E-value=3 Score=39.11 Aligned_cols=59 Identities=14% Similarity=0.190 Sum_probs=37.4
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
++++|+|-| +..|.||..+++.... ..|. .+. --++....+++|+|-| +..++||+.+.
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~~~~~-~w~g-i~~-iDAA~~~~g~~YfFkG----------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGTKKER-SWPA-VGN-CTSALRWLGRYYCFQG----------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTEEEEE-CCTT-SCC-CSEEEEETTEEEEEET----------TEEEEECTTTC
T ss_pred CCeEEEEec--------ccEEEEecccceeecc-cCCC-CCc-cchheeeCCceEEEEC----------CEEEEEcCccC
Confidence 678898887 2479999988765431 1111 112 1234445689999976 56788887654
No 114
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.45 E-value=3.8 Score=40.43 Aligned_cols=104 Identities=14% Similarity=0.023 Sum_probs=48.1
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCC---EEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGR---YIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~---~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
++..++.|+.+. .+.++|.....=..+..........-.+++...+ .+++.|+.++ .+..||.
T Consensus 483 ~~~~l~s~s~D~------~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~--------~v~vwd~ 548 (694)
T 3dm0_A 483 DNRQIVSASRDR------TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK--------TVKVWNL 548 (694)
T ss_dssp TSSCEEEEETTS------CEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS--------CEEEEET
T ss_pred CCCEEEEEeCCC------EEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC--------eEEEEEC
Confidence 456667776542 4667776544322221111110111223333322 3556665443 3778888
Q ss_pred CCCcEEeCCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 198 ETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 198 ~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
.+.+-...-.-. ...-.+++. -++++++.|+.++ .+..|++
T Consensus 549 ~~~~~~~~~~~h-~~~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~ 590 (694)
T 3dm0_A 549 SNCKLRSTLAGH-TGYVSTVAVSPDGSLCASGGKDG-----VVLLWDL 590 (694)
T ss_dssp TTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS-----BCEEEET
T ss_pred CCCcEEEEEcCC-CCCEEEEEEeCCCCEEEEEeCCC-----eEEEEEC
Confidence 776533211111 111122222 2567777777543 4566653
No 115
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.35 E-value=4.6 Score=36.76 Aligned_cols=103 Identities=12% Similarity=0.060 Sum_probs=54.4
Q ss_pred eEeecCCC--CCeEEccCCCCCCCCceEEEE---CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCC---CCCCcc-
Q 016877 92 FQDLPAPE--LKWEKMKAAPVPRLDGAAIQI---KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDM---PREMAH- 162 (381)
Q Consensus 92 ~~~~~~~~--~~W~~l~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~---~~~~~r- 162 (381)
++.++... .+|+.+.+......-++++.. ++.||+.+..... -.-+++.+-...+|+.+... +....+
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~---g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~ 109 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHL---GPTVFRSDDGGGNWTEATRPPAFNKAPEGE 109 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--C---CEEEEEESSTTSCCEECSBCCCCCCCC---
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCC---CccEEEeCCCCCCceECCccccCCCccccc
Confidence 34444433 689876422111222333332 4578876542111 12477777777899987532 211011
Q ss_pred ------ceEEEEEe----CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC
Q 016877 163 ------SHLGMVTD----GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP 206 (381)
Q Consensus 163 ------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~ 206 (381)
.-.+++.. .+.||+.+- ..-+++.+-...+|+.+.
T Consensus 110 ~~~~~~~i~~l~~~~~~~~~~l~~g~~---------~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 110 TGRVVDHVFWLTPGHASEPGTWYAGTS---------PQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp -CCCCCEEEEEEECCTTSTTCEEEEEE---------TTEEEEESSTTSBCEECH
T ss_pred ccccccceeEEEeCCCCCCCEEEEEec---------CCcEEEEcCCCCCeEECc
Confidence 11233443 577887542 234888888888999985
No 116
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.31 E-value=4.2 Score=36.17 Aligned_cols=100 Identities=8% Similarity=-0.056 Sum_probs=49.1
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECC-EEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT 169 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 169 (381)
.++.+|..+.+.+.+.........+.+..-++ .||+....+..... -.+|.+|..+.+.+.+...+... .....++.
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~-v~~~~~~~~~g~~~~~~~~~~~~-~~p~~~~~ 107 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAA-VSAFAFDKEKGTLHLLNTQKTMG-ADPCYLTT 107 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCE-EEEEEEETTTTEEEEEEEEECSS-SCEEEEEE
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCc-EEEEEEeCCCCcEEEeeEeccCC-CCcEEEEE
Confidence 35566777777766654421121222222344 57766543211111 12556666667777665443211 12233344
Q ss_pred eCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 170 DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 170 ~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
.++.+|+.... ...+..|+..++
T Consensus 108 dg~~l~~~~~~--------~~~v~~~~~~~~ 130 (361)
T 3scy_A 108 NGKNIVTANYS--------GGSITVFPIGQD 130 (361)
T ss_dssp CSSEEEEEETT--------TTEEEEEEBCTT
T ss_pred CCCEEEEEECC--------CCEEEEEEeCCC
Confidence 55567766421 245778887643
No 117
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.31 E-value=1.2 Score=44.84 Aligned_cols=123 Identities=3% Similarity=-0.064 Sum_probs=56.6
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecC-CCCCCCCccceEEEEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR-FDMPREMAHSHLGMVT 169 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~ 169 (381)
.+..+|..+.+....-..+..........-++..+++|+.+ ..+.+||..+.+.... ..... .-.+++.
T Consensus 36 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~----~v~~~~~ 105 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAHPD----YIRSIAV 105 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT------SEEEEEETTTCCEEEEEECCSS----CEEEEEE
T ss_pred EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEecCCC----CEEEEEE
Confidence 56677766654322111111111111222355667777653 3588899887765432 11111 1122333
Q ss_pred e-CCEEEEEcCCCCCCCCCCcceEEEEECCCC-cEEeCCCCCCCCcccEEEEE--CCEEEEEccCCC
Q 016877 170 D-GRYIYVVTGQYGPQCRGPTAHTFVLDTETK-KWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGE 232 (381)
Q Consensus 170 ~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~ 232 (381)
. ++...+.|+.+ ..+..||..+. .....-. .....-.+++.. ++.+++.|+.++
T Consensus 106 s~~~~~l~~~~~d--------g~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 106 HPTKPYVLSGSDD--------LTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp CSSSSEEEEEETT--------SEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred eCCCCEEEEEcCC--------CEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 2 44455565533 34778888765 2222111 111122233333 456777776543
No 118
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.31 E-value=0.83 Score=40.49 Aligned_cols=105 Identities=9% Similarity=-0.021 Sum_probs=50.0
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++.+++.|+.+ ..+.+||..+.+-...-.-.. ..-.+++.. +++.++.|+.+ ..+..||..+
T Consensus 43 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~ 105 (369)
T 3zwl_B 43 EGDLLFSCSKD------SSASVWYSLNGERLGTLDGHT---GTIWSIDVDCFTKYCVTGSAD--------YSIKLWDVSN 105 (369)
T ss_dssp TSCEEEEEESS------SCEEEEETTTCCEEEEECCCS---SCEEEEEECTTSSEEEEEETT--------TEEEEEETTT
T ss_pred CCCEEEEEeCC------CEEEEEeCCCchhhhhhhhcC---CcEEEEEEcCCCCEEEEEeCC--------CeEEEEECCC
Confidence 45666677654 247888887765433211111 112233333 45556666543 3588889887
Q ss_pred CcEEeCCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 200 KKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
.+-...-.. ...-.++.. -+++.++.++.+..........|++
T Consensus 106 ~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~ 149 (369)
T 3zwl_B 106 GQCVATWKS--PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEI 149 (369)
T ss_dssp CCEEEEEEC--SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEE
T ss_pred CcEEEEeec--CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEe
Confidence 664333221 111222222 2455555555431112234555554
No 119
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.22 E-value=4.1 Score=35.82 Aligned_cols=94 Identities=10% Similarity=-0.002 Sum_probs=47.3
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE---CCEEEEEecCCCCCCcccceEEEeCCCCeEecCC-CCCCCCccceE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI---KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF-DMPREMAHSHL 165 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~r~~~ 165 (381)
..+..+|..+.+-.. .+........++.+ ++.+++.|+.+ ..+.+||..+.+-...- .+... ...-.
T Consensus 95 g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~-~~~v~ 165 (366)
T 3k26_A 95 GIIRIINPITMQCIK--HYVGHGNAINELKFHPRDPNLLLSVSKD------HALRLWNIQTDTLVAIFGGVEGH-RDEVL 165 (366)
T ss_dssp CEEEEECTTTCCEEE--EEESCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTTTEEEEEECSTTSC-SSCEE
T ss_pred CEEEEEEchhceEee--eecCCCCcEEEEEECCCCCCEEEEEeCC------CeEEEEEeecCeEEEEecccccc-cCcee
Confidence 457788877654322 12111112222222 45677777764 24888999877644321 11111 11222
Q ss_pred EEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 166 GMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 166 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
+++.. ++..++.|+.++ .+..||..+.
T Consensus 166 ~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~ 193 (366)
T 3k26_A 166 SADYDLLGEKIMSCGMDH--------SLKLWRINSK 193 (366)
T ss_dssp EEEECTTSSEEEEEETTS--------CEEEEESCSH
T ss_pred EEEECCCCCEEEEecCCC--------CEEEEECCCC
Confidence 33332 455566666433 4778888764
No 120
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=93.19 E-value=2.1 Score=38.56 Aligned_cols=108 Identities=8% Similarity=-0.038 Sum_probs=53.4
Q ss_pred EEECCEEEEEecCCCCCCcccceEEEeCCCCe----EecCCCCCCCCccceEEEEEe-C----C---EEEEEcCCCCCCC
Q 016877 118 IQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT----WGGRFDMPREMAHSHLGMVTD-G----R---YIYVVTGQYGPQC 185 (381)
Q Consensus 118 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~----W~~~~~~~~~~~r~~~~~~~~-~----~---~iyv~GG~~~~~~ 185 (381)
+.+...+++.|+.+ ..+.+||..+.+ +..+..+... ...-.+++.. + + .+++.|+.++
T Consensus 22 ~~~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg--- 91 (397)
T 1sq9_A 22 VSACNSFTVSCSGD------GYLKVWDNKLLDNENPKDKSYSHFVH-KSGLHHVDVLQAIERDAFELCLVATTSFSG--- 91 (397)
T ss_dssp EEECSSEEEEEETT------SEEEEEESBCCTTCCGGGGEEEEECC-TTCEEEEEEEEEEETTTEEEEEEEEEETTS---
T ss_pred EEecCCeEEEEcCC------CEEEEEECCCcccccCCCcceEEecC-CCcEEEEEEecccccCCccccEEEEEcCCC---
Confidence 33444677777654 247788887765 2222111111 0111223332 3 5 6777776543
Q ss_pred CCCcceEEEEECCCCc------EEeCCCCCCC---CcccEEEEE-----CCEE-EEEccCCCCCCCCCccceEee
Q 016877 186 RGPTAHTFVLDTETKK------WQDLPPLPVP---RYAPATQLW-----RGRL-HVMGGSGENRYTPEVDHWSLA 245 (381)
Q Consensus 186 ~~~~~~~~~yd~~~~~------W~~~~~~p~~---r~~~~~~~~-----~~~l-yv~GG~~~~~~~~~~~~~~~~ 245 (381)
.+..||..+.. +..+...+.. ..-.++... ++.. ++.|+.++ .+..|++.
T Consensus 92 -----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~ 156 (397)
T 1sq9_A 92 -----DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TTYIWKFH 156 (397)
T ss_dssp -----CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CEEEEEEE
T ss_pred -----CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cEEEEeCC
Confidence 37777777665 6665543311 222233333 4556 77776543 46667654
No 121
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.18 E-value=3.8 Score=36.62 Aligned_cols=51 Identities=12% Similarity=0.063 Sum_probs=24.0
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCC
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTD 147 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 147 (381)
.+..+|..+.+-...-..+.......+..-++..++.||.++ .+.+|+...
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~------~i~v~~~~~ 137 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDN------KCSVYPLTF 137 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTS------EEEEEECCC
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCC------CEEEEEEec
Confidence 455666555543322222222111122223567778887653 356666543
No 122
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.05 E-value=4.6 Score=35.88 Aligned_cols=51 Identities=4% Similarity=0.027 Sum_probs=24.9
Q ss_pred eEeecCCCCCeEEccCCCCCCCCceEEEECC-EEEEEecCCCCCCcccceEEEeCCCC
Q 016877 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQIKN-LLYVFAGYGSIDYVHSHVDIYNFTDN 148 (381)
Q Consensus 92 ~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 148 (381)
++.++..+.+.+.+...+..........+++ .||+....+ ..+.+|+..++
T Consensus 79 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~------~~v~~~~~~~~ 130 (361)
T 3scy_A 79 AFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSG------GSITVFPIGQD 130 (361)
T ss_dssp EEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTT------TEEEEEEBCTT
T ss_pred EEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCC------CEEEEEEeCCC
Confidence 3455555566666554432222222222255 566655321 34777887643
No 123
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.99 E-value=2.8 Score=37.61 Aligned_cols=65 Identities=2% Similarity=-0.067 Sum_probs=35.1
Q ss_pred cceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC
Q 016877 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (381)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (381)
..++.+|+.+.+-+.+...+. ...+....- +++..++....... .....++.+|+.+...+.+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~---~~~~~~~sp~dg~~l~~~~~~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ---WLGHPIYRPYDDSTVAFCHEGPHD--LVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS---CEEEEEEETTEEEEEEEEECSCTT--TSSCSEEEEETTSCCCEESCC
T ss_pred ceEEEEECCCCceEEeecCCc---cccccEECCCCCCEEEEEEecCCC--CCcceEEEEeCCCCceEEeee
Confidence 569999999887665543222 222222223 44433333222111 114579999998877666654
No 124
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=92.71 E-value=1.6 Score=37.98 Aligned_cols=62 Identities=5% Similarity=-0.014 Sum_probs=33.1
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEec-CCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
++.+++.|+.+ ..+.++|..+.+-.. +.... ..-.+++.. ++.+++.|+.++ .+..+|.+
T Consensus 66 ~~~~l~s~s~d------~~i~vwd~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~sgs~D~--------~v~lWd~~ 127 (304)
T 2ynn_A 66 RKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAHP----DYIRSIAVHPTKPYVLSGSDDL--------TVKLWNWE 127 (304)
T ss_dssp GGTEEEEEETT------SEEEEEETTTCCEEEEEECCS----SCEEEEEECSSSSEEEEEETTS--------CEEEEEGG
T ss_pred CCCEEEEECCC------CEEEEEECCCCcEEEEEeCCC----CcEEEEEEcCCCCEEEEECCCC--------eEEEEECC
Confidence 55667777654 247788887764322 11111 112233333 455666666543 36677776
Q ss_pred CC
Q 016877 199 TK 200 (381)
Q Consensus 199 ~~ 200 (381)
+.
T Consensus 128 ~~ 129 (304)
T 2ynn_A 128 NN 129 (304)
T ss_dssp GT
T ss_pred CC
Confidence 54
No 125
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=92.61 E-value=5.9 Score=36.09 Aligned_cols=185 Identities=16% Similarity=0.124 Sum_probs=99.0
Q ss_pred CCeEE--ccCCCCCCCCceEEEECCEEEEEecCCCCCCcccc-eEEEe----CCCCeEe-cCCCCCCCCccceEEEEEeC
Q 016877 100 LKWEK--MKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSH-VDIYN----FTDNTWG-GRFDMPREMAHSHLGMVTDG 171 (381)
Q Consensus 100 ~~W~~--l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~-~~~yd----~~~~~W~-~~~~~~~~~~r~~~~~~~~~ 171 (381)
+.|++ |+.+|..-.-|+.+.+++.=|++|=.++.-.+..- +..|. ...+.-+ .++.- ........++-.++
T Consensus 270 spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~se-y~~~AsEPCvkyYd 348 (670)
T 3ju4_A 270 SPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSE-YEPDASEPCIKYYD 348 (670)
T ss_dssp SCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGG-GCTTEEEEEEEEET
T ss_pred CCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhh-hccccccchhhhhC
Confidence 35643 45566556678899999888888865443322111 22221 1122222 22221 11134567788899
Q ss_pred CEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC-CCCCCCcccEEEEECCEEEEEccCCC----------CCCC---C
Q 016877 172 RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP-PLPVPRYAPATQLWRGRLHVMGGSGE----------NRYT---P 237 (381)
Q Consensus 172 ~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~----------~~~~---~ 237 (381)
+.+|+.---.... ..-+.+.+-+..-..|+.+. +-..-....-.+.+++.||+||-... .+|. |
T Consensus 349 gvLyLtTRgt~~~--~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~a~yP 426 (670)
T 3ju4_A 349 GVLYLITRGTRGD--RLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYKASYP 426 (670)
T ss_dssp TEEEEEEEESCTT--SCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSSCBCC
T ss_pred CEEEEEecCcCCC--CCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCCCcccccccCC
Confidence 9999986322221 12356777777788898875 22223333445678999999986432 1121 1
Q ss_pred CccceEeeeecCCccCCceEEecC------CCCCCcce-eEEEeCCEE-EEEccCCCC
Q 016877 238 EVDHWSLAVKDGKPLEKEWRTEIP------IPRGGPHR-ACVVVDDRL-LVIGGQEGD 287 (381)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~W~~~~~------~p~~~~~~-~~~~~~~~l-~v~GG~~~~ 287 (381)
..-.-...+.+...+.-+|..+.. .-....+. ++|+-++-| |+|||++..
T Consensus 427 RtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~ 484 (670)
T 3ju4_A 427 RTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHF 484 (670)
T ss_dssp EEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSC
T ss_pred ceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccC
Confidence 111122334444555668876532 12222333 344556665 678997643
No 126
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.59 E-value=2.7 Score=36.58 Aligned_cols=137 Identities=11% Similarity=0.032 Sum_probs=63.8
Q ss_pred eeeeeeCCCce--eeecCCCCC-CCceeEE--eee-cccccccccCcceEeecCCCCCeEEccCCCCCC----CCceEEE
Q 016877 50 IASNWSPYHNS--IILPNNGPQ-KGENIGV--KTK-KDVVPKRILPATFQDLPAPELKWEKMKAAPVPR----LDGAAIQ 119 (381)
Q Consensus 50 ~~~~~d~~~~~--~~~p~~~~~-~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p~~r----~~~~~~~ 119 (381)
.+..||+.+.+ ..++..... ...+++. -+. .+... .....+..+|..+.+-...-+.+.+- .-..++.
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~--~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV--NKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAAL 89 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE--TTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEE
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEe--CCCCeEEEEECCCCCeEeeEEcCCcccccccccceEE
Confidence 67889998877 333321100 0111221 111 12211 12346788888776643322222100 1122333
Q ss_pred E-CC-EEEEEecC---CCCCC--cccceEEEeCCCCeEecCCCCCCCCccceEEEEE--eCCEEEEEcCCCCCCCCCCcc
Q 016877 120 I-KN-LLYVFAGY---GSIDY--VHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTA 190 (381)
Q Consensus 120 ~-~~-~iyv~GG~---~~~~~--~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 190 (381)
. ++ .+|+.... ..... ....+.+||+.+.+....-+.+.. ...++. .++.+|+.. .
T Consensus 90 s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~-----------~ 154 (337)
T 1pby_B 90 SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ----ITMLAWARDGSKLYGLG-----------R 154 (337)
T ss_dssp CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS----CCCEEECTTSSCEEEES-----------S
T ss_pred CCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC----cceeEECCCCCEEEEeC-----------C
Confidence 2 34 77776421 10110 125699999988765443222221 112233 234477662 3
Q ss_pred eEEEEECCCCcEE
Q 016877 191 HTFVLDTETKKWQ 203 (381)
Q Consensus 191 ~~~~yd~~~~~W~ 203 (381)
.++.+|+.+.+-.
T Consensus 155 ~i~~~d~~~~~~~ 167 (337)
T 1pby_B 155 DLHVMDPEAGTLV 167 (337)
T ss_dssp SEEEEETTTTEEE
T ss_pred eEEEEECCCCcEe
Confidence 4889999887643
No 127
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.51 E-value=0.85 Score=40.17 Aligned_cols=104 Identities=9% Similarity=0.018 Sum_probs=51.8
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe---CCEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
++..++.|+.+ ..+.+||+.+++...+..+... ...-.+++.. ++.+++.|+.++ .+..+|+
T Consensus 24 ~g~~lasgs~D------~~v~lwd~~~~~~~~~~~l~gH-~~~V~~v~~~~~~~~~~l~s~s~D~--------~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD------RSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMYGNILASCSYDR--------KVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT------TEEEEEEEETTEEEEEEEEECC-SSCEEEEEECCGGGSSCEEEEETTS--------CEEEECC
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcEEEEEEcCC-CccEEEEEeCCCCCCCEEEEEECCC--------EEEEEEC
Confidence 45677777754 2477788776654332222211 0111233332 255667776543 3778888
Q ss_pred CCCcEEeCCCCC-CCCcccEEEEE-C--CEEEEEccCCCCCCCCCccceEe
Q 016877 198 ETKKWQDLPPLP-VPRYAPATQLW-R--GRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 198 ~~~~W~~~~~~p-~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
++..|..+..+. ....-.+++.. + +.+++.|+.++ .+..|++
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~ 134 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTY 134 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEE
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEec
Confidence 877664433222 11112233332 2 45666666543 4555654
No 128
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.42 E-value=2.8 Score=36.37 Aligned_cols=214 Identities=8% Similarity=0.056 Sum_probs=100.5
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--eecccccccccCcceEeecCCCCCeEEccCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
++.||++...+ +.+.+||+.++. ....... ...+++.. +..... ....+..+|+.+.+++.+...+
T Consensus 24 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~dG~l~v~----~~~~l~~~d~~~g~~~~~~~~~ 92 (297)
T 3g4e_A 24 SNSLLFVDIPA-----KKVCRWDSFTKQVQRVTMDA--PVSSVALRQSGGYVAT----IGTKFCALNWKEQSAVVLATVD 92 (297)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTCCEEEEECSS--CEEEEEEBTTSSEEEE----ETTEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEeCCC--ceEEEEECCCCCEEEE----ECCeEEEEECCCCcEEEEEecC
Confidence 46777776533 367999998876 3332211 11112111 111111 1346889999888877765443
Q ss_pred CC--CCCceEEEE--CCEEEEEecCCCC-----CCcccceEEEeCCCCeEecCC-CCCCCCccceEEEEEe--CCEEEEE
Q 016877 110 VP--RLDGAAIQI--KNLLYVFAGYGSI-----DYVHSHVDIYNFTDNTWGGRF-DMPREMAHSHLGMVTD--GRYIYVV 177 (381)
Q Consensus 110 ~~--r~~~~~~~~--~~~iyv~GG~~~~-----~~~~~~~~~yd~~~~~W~~~~-~~~~~~~r~~~~~~~~--~~~iyv~ 177 (381)
.. ........+ ++++|+..-.... ......++++|+.. +...+. .+. ....++.. ++.+|+.
T Consensus 93 ~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~-----~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 93 NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD-----ISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES-----BEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc-----cccceEEcCCCCEEEEe
Confidence 22 111222222 5677764321110 11224588888763 333221 111 12234443 4468887
Q ss_pred cCCCCCCCCCCcceEEEEEC--CCCcEEe---CCCCCCC-CcccEEEE-ECCEEEEEccCCCCCCCCCccceEeeeecCC
Q 016877 178 TGQYGPQCRGPTAHTFVLDT--ETKKWQD---LPPLPVP-RYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVKDGK 250 (381)
Q Consensus 178 GG~~~~~~~~~~~~~~~yd~--~~~~W~~---~~~~p~~-r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 250 (381)
... ...+++||. ++..... +..++.. ..-..+++ -++.||+.....+ . +..+|
T Consensus 167 ~~~--------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~-----~-------v~~~d 226 (297)
T 3g4e_A 167 DSL--------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG-----R-------VIRLD 226 (297)
T ss_dssp EGG--------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT-----E-------EEEEC
T ss_pred cCC--------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC-----E-------EEEEc
Confidence 531 356788875 4544321 1112111 11123333 3567887742211 1 22234
Q ss_pred ccCCceEEecCCCCCCcceeEEEeC----CEEEEEccCC
Q 016877 251 PLEKEWRTEIPIPRGGPHRACVVVD----DRLLVIGGQE 285 (381)
Q Consensus 251 ~~~~~W~~~~~~p~~~~~~~~~~~~----~~l~v~GG~~ 285 (381)
+.+.+.....++|... ..++.++ +.|||.....
T Consensus 227 ~~tG~~~~~i~~p~~~--~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 227 PVTGKRLQTVKLPVDK--TTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TTTCCEEEEEECSSSB--EEEEEEESGGGCEEEEEEBCT
T ss_pred CCCceEEEEEECCCCC--ceEEEEeCCCCCEEEEEcCCc
Confidence 6656555444445332 2445553 4788876543
No 129
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.40 E-value=5.9 Score=35.80 Aligned_cols=91 Identities=8% Similarity=0.003 Sum_probs=46.9
Q ss_pred EEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCc
Q 016877 123 LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 123 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
.+++.|+.+ ..+.++|..+.+....-..... ...-.+++.. ++.+++.|+.+ ..+..||+.+.+
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~ 209 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTGAAVLTLGPDVH-PDTIYSVDWSRDGALICTSCRD--------KRVRVIEPRKGT 209 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTTEEEEEECTTTC-CSCEEEEEECTTSSCEEEEETT--------SEEEEEETTTTE
T ss_pred CEEEEEcCC------CEEEEEECCCCCccEEEecCCC-CCceEEEEECCCCCEEEEEecC--------CcEEEEeCCCCc
Confidence 577777764 2488899988765542210110 1122333333 55566666543 458899998865
Q ss_pred EEeCC-CCCC-CCcccEEEEECCEEEEEc
Q 016877 202 WQDLP-PLPV-PRYAPATQLWRGRLHVMG 228 (381)
Q Consensus 202 W~~~~-~~p~-~r~~~~~~~~~~~lyv~G 228 (381)
-...- .... .+....+..-++++++.|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 210 VVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp EEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred eeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 43221 1111 112222223467777776
No 130
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.32 E-value=1.7 Score=38.35 Aligned_cols=88 Identities=8% Similarity=-0.073 Sum_probs=47.0
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE---eCCEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT---DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
++..++.|+.+ ..+.+||..+.+.........+ -.++.. .++.+++.|+.+ ..+..||.
T Consensus 97 ~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~~~~~d--------g~i~vwd~ 158 (368)
T 3mmy_A 97 DGSKVFTASCD------KTAKMWDLSSNQAIQIAQHDAP----VKTIHWIKAPNYSCVMTGSWD--------KTLKFWDT 158 (368)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECSSC----EEEEEEEECSSCEEEEEEETT--------SEEEEECS
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCCceeeccccCc----eEEEEEEeCCCCCEEEEccCC--------CcEEEEEC
Confidence 55666677654 3588899988876654332221 122332 356677777644 34788888
Q ss_pred CCCcEEeCCCCCCCCcccEEEEECCEEEEEc
Q 016877 198 ETKKWQDLPPLPVPRYAPATQLWRGRLHVMG 228 (381)
Q Consensus 198 ~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~G 228 (381)
.+.+- +..+.......+.....+.+++..
T Consensus 159 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 159 RSSNP--MMVLQLPERCYCADVIYPMAVVAT 187 (368)
T ss_dssp SCSSC--SEEEECSSCEEEEEEETTEEEEEE
T ss_pred CCCcE--EEEEecCCCceEEEecCCeeEEEe
Confidence 76541 111222223333444555555543
No 131
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.10 E-value=3.7 Score=36.08 Aligned_cols=89 Identities=7% Similarity=-0.084 Sum_probs=46.1
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEE----ECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQ----IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHL 165 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~----~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~ 165 (381)
..+..+|..+.+...+... .....++. -++.+++.|+.+ ..+.+||+.+.+-.. .+..+ ....
T Consensus 108 g~v~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~--~~~~~--~~~~ 174 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQH---DAPVKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSNPMM--VLQLP--ERCY 174 (368)
T ss_dssp SEEEEEETTTTEEEEEEEC---SSCEEEEEEEECSSCEEEEEEETT------SEEEEECSSCSSCSE--EEECS--SCEE
T ss_pred CcEEEEEcCCCCceeeccc---cCceEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCcEEE--EEecC--CCce
Confidence 3577778777665443221 11122222 255777787764 248888887654222 11211 1233
Q ss_pred EEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
+.....+.+++.+. ...+..||....
T Consensus 175 ~~~~~~~~~~~~~~---------~~~i~~~~~~~~ 200 (368)
T 3mmy_A 175 CADVIYPMAVVATA---------ERGLIVYQLENQ 200 (368)
T ss_dssp EEEEETTEEEEEEG---------GGCEEEEECSSS
T ss_pred EEEecCCeeEEEeC---------CCcEEEEEeccc
Confidence 44555665555433 244677777654
No 132
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.06 E-value=2.6 Score=38.59 Aligned_cols=64 Identities=9% Similarity=0.030 Sum_probs=34.3
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++.+++.|+.++ .+.+||+.+.+-.. .+... ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 161 ~~~~l~sgs~D~------~i~iwd~~~~~~~~--~~~~h-~~~V~~v~~~p~~~~l~s~s~D--------~~i~~wd~~~ 223 (410)
T 1vyh_C 161 SGKLLASCSADM------TIKLWDFQGFECIR--TMHGH-DHNVSSVSIMPNGDHIVSASRD--------KTIKMWEVQT 223 (410)
T ss_dssp TSSEEEEEETTS------CCCEEETTSSCEEE--CCCCC-SSCEEEEEECSSSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCceeE--EEcCC-CCCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCC
Confidence 457778887653 35667876554322 22221 1112233332 44556666643 3477888877
Q ss_pred Cc
Q 016877 200 KK 201 (381)
Q Consensus 200 ~~ 201 (381)
..
T Consensus 224 ~~ 225 (410)
T 1vyh_C 224 GY 225 (410)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 133
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.84 E-value=2.9 Score=38.33 Aligned_cols=90 Identities=9% Similarity=0.040 Sum_probs=43.1
Q ss_pred eeeeeeCCCce-eeecC-CCCCCC-ceeEEee-ecccccccccCcceEeecCCCCCeEEccCCCCCCCCceEEEECCEEE
Q 016877 50 IASNWSPYHNS-IILPN-NGPQKG-ENIGVKT-KKDVVPKRILPATFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLY 125 (381)
Q Consensus 50 ~~~~~d~~~~~-~~~p~-~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iy 125 (381)
++..||..+++ ..+.. ..+... .+++-.. +.....+ .....+..+|..+.+-.. .+........+...++.++
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasg-s~Dg~v~iWd~~~~~~~~--~~~~h~~~v~~~s~~~~~l 202 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVG-TSSAEVQLWDVQQQKRLR--NMTSHSARVGSLSWNSYIL 202 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEE--EECCCSSCEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEE-ECCCeEEEEEcCCCcEEE--EEeCCCCceEEEeeCCCEE
Confidence 68899999887 43322 111111 1111111 1111111 123356777776654322 2222222334455677788
Q ss_pred EEecCCCCCCcccceEEEeCCCC
Q 016877 126 VFAGYGSIDYVHSHVDIYNFTDN 148 (381)
Q Consensus 126 v~GG~~~~~~~~~~~~~yd~~~~ 148 (381)
+.|+.+. .+..+|....
T Consensus 203 ~sgs~d~------~i~~~d~~~~ 219 (420)
T 4gga_A 203 SSGSRSG------HIHHHDVRVA 219 (420)
T ss_dssp EEEETTS------EEEEEETTSS
T ss_pred EEEeCCC------ceeEeeeccc
Confidence 8887642 3666676544
No 134
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=91.71 E-value=6.2 Score=34.34 Aligned_cols=125 Identities=4% Similarity=-0.092 Sum_probs=59.2
Q ss_pred CcceEeecC-CCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCC---e----EecCCCCCCCC
Q 016877 89 PATFQDLPA-PELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDN---T----WGGRFDMPREM 160 (381)
Q Consensus 89 ~~~~~~~~~-~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~----W~~~~~~~~~~ 160 (381)
...+..+|. .+.+-..+...+....-..+....+.+++.|+.+ ..+.+||+.+. . .+.+..+..+
T Consensus 78 dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~- 150 (342)
T 1yfq_A 78 QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKVK- 150 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSSC-
T ss_pred CCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccccccccccccCCeeeEEeeC-
Confidence 346778888 7766555443111111122222225556666654 24777777640 0 2223333321
Q ss_pred ccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCC-Cc--EEeCCCCCCCCcccEEEEE--CCEEEEEccCC
Q 016877 161 AHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTET-KK--WQDLPPLPVPRYAPATQLW--RGRLHVMGGSG 231 (381)
Q Consensus 161 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~-~~--W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~ 231 (381)
..-.+++...+. ++.|+.+ ..+..||..+ .. ..... .+....-.+++.. ++++++.|+.+
T Consensus 151 -~~v~~~~~~~~~-l~~~~~d--------~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 151 -NKIFTMDTNSSR-LIVGMNN--------SQVQWFRLPLCEDDNGTIEE-SGLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp -CCEEEEEECSSE-EEEEEST--------TEEEEEESSCCTTCCCEEEE-CSCSSCEEEEEECSGGGCEEEEEETT
T ss_pred -CceEEEEecCCc-EEEEeCC--------CeEEEEECCccccccceeee-cCCCCceeEEEECCCCCCEEEEEecC
Confidence 223455556666 4455432 4588899887 32 21111 1111122233333 46677777654
No 135
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.71 E-value=6.6 Score=34.62 Aligned_cols=65 Identities=8% Similarity=0.073 Sum_probs=37.6
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++.+++.|+.++ .+.+||+.+.+-......... ..-.+++. -++.+++.|+.++ .+..||..+
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~~--~~i~~~~~~pdg~~lasg~~dg--------~i~iwd~~~ 201 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHSAKSD--VEYSSGVLHKDSLLLALYSPDG--------ILDVYNLSS 201 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEECCCSS--CCCCEEEECTTSCEEEEECTTS--------CEEEEESSC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEecCCC--CceEEEEECCCCCEEEEEcCCC--------EEEEEECCC
Confidence 456777777542 478889887765433222221 11223333 3567777777543 478899987
Q ss_pred Cc
Q 016877 200 KK 201 (381)
Q Consensus 200 ~~ 201 (381)
.+
T Consensus 202 ~~ 203 (343)
T 3lrv_A 202 PD 203 (343)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 136
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=91.56 E-value=3 Score=36.46 Aligned_cols=93 Identities=10% Similarity=0.038 Sum_probs=47.4
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCe----EecCCCCCCCCccceEEEEE-eCCE-EEEEcCCCCCCCCCCcceEEE
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT----WGGRFDMPREMAHSHLGMVT-DGRY-IYVVTGQYGPQCRGPTAHTFV 194 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~----W~~~~~~~~~~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~~ 194 (381)
++.+++.|+.+ ..+.+||..+.. -........ .-.+++. -+++ .++.|+.+ ..+..
T Consensus 22 ~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~~~~~d--------g~i~~ 83 (342)
T 1yfq_A 22 SKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSLRYKH----PLLCCNFIDNTDLQIYVGTVQ--------GEILK 83 (342)
T ss_dssp GGTEEEEEETT------SEEEEEEEETTTTEEEEEEEEECSS----CEEEEEEEESSSEEEEEEETT--------SCEEE
T ss_pred CCCEEEEEcCC------CeEEEEEeCCCCccccceeeeecCC----ceEEEEECCCCCcEEEEEcCC--------CeEEE
Confidence 44556666643 246777776654 332221111 1222333 3556 66666643 34888
Q ss_pred EEC-CCCcEEeCCCCCCCCcccEEEEECCEEEEEccCC
Q 016877 195 LDT-ETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (381)
Q Consensus 195 yd~-~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 231 (381)
||. .+.+-..+...+....-.+++...+.+++.++.+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d 121 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT
T ss_pred EEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC
Confidence 999 8877666554212222233444435566666644
No 137
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=91.55 E-value=1.7 Score=38.89 Aligned_cols=67 Identities=10% Similarity=-0.058 Sum_probs=33.3
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCC-CCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR-EMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
.+.-++.|+.+ ..+.++|+.+++-........ .-...-.+++. -+++.++.|+.++ .+..+|++
T Consensus 92 ~d~~l~~~s~d------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~--------~i~iwd~~ 157 (344)
T 4gqb_B 92 GERGILVASDS------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI--------CIKVWDLA 157 (344)
T ss_dssp TTTEEEEEETT------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETT
T ss_pred CCCeEEEEECC------CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC--------eEEEEECC
Confidence 44445566554 247788887664222111000 00011123333 3566677776544 37788988
Q ss_pred CCc
Q 016877 199 TKK 201 (381)
Q Consensus 199 ~~~ 201 (381)
+.+
T Consensus 158 ~~~ 160 (344)
T 4gqb_B 158 QQV 160 (344)
T ss_dssp TTE
T ss_pred CCc
Confidence 765
No 138
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.53 E-value=0.9 Score=42.08 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=53.7
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
++.+++.|+.++ .+.++|..+..-..+-.+... ...-.+++.. ++.+++.|+.++ .+-++|.+
T Consensus 131 ~~~~lasGs~dg------~i~lWd~~~~~~~~~~~~~gH-~~~V~~l~f~p~~~~~l~s~s~D~--------~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG------DIMLWNFGIKDKPTFIKGIGA-GGSITGLKFNPLNTNQFYASSMEG--------TTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS------CEEEECSSCCSCCEEECCCSS-SCCCCEEEECSSCTTEEEEECSSS--------CEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCceeEEEccCC-CCCEEEEEEeCCCCCEEEEEeCCC--------EEEEeecc
Confidence 456788887653 477888876654332222111 1111234442 455666776554 36778988
Q ss_pred CCcEEeCCCCC-CCCcccEEEE-ECCEEEEEccCCCCCCCCCccceE
Q 016877 199 TKKWQDLPPLP-VPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (381)
Q Consensus 199 ~~~W~~~~~~p-~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~ 243 (381)
++.-..+.... ......++.. -++++++.|+.++ .+..|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd 237 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLN 237 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEE
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeec
Confidence 77655443221 1112223333 3566777776543 345555
No 139
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.47 E-value=0.94 Score=40.14 Aligned_cols=92 Identities=9% Similarity=-0.051 Sum_probs=46.9
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCCCeEec-CCCCCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
+.+++.|+.++ .+.+||+.+.+-.. +..... .-.++... ++.+++.|+.++ .+..||..
T Consensus 85 ~~~l~~~~~dg------~i~v~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~l~s~~~dg--------~i~iwd~~ 146 (366)
T 3k26_A 85 HPLLAVAGSRG------IIRIINPITMQCIKHYVGHGN----AINELKFHPRDPNLLLSVSKDH--------ALRLWNIQ 146 (366)
T ss_dssp CEEEEEEETTC------EEEEECTTTCCEEEEEESCCS----CEEEEEECSSCTTEEEEEETTS--------CEEEEETT
T ss_pred CCEEEEecCCC------EEEEEEchhceEeeeecCCCC----cEEEEEECCCCCCEEEEEeCCC--------eEEEEEee
Confidence 46777887642 47888887664322 111111 12233333 556777776543 47889988
Q ss_pred CCcEEeCC-CCC-CCCcccEEEEE-CCEEEEEccCC
Q 016877 199 TKKWQDLP-PLP-VPRYAPATQLW-RGRLHVMGGSG 231 (381)
Q Consensus 199 ~~~W~~~~-~~p-~~r~~~~~~~~-~~~lyv~GG~~ 231 (381)
+.+-...- .+. ....-.+++.. ++..++.|+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCC
Confidence 76543321 111 12222222222 45566666654
No 140
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.79 E-value=6.7 Score=35.02 Aligned_cols=109 Identities=12% Similarity=0.049 Sum_probs=44.3
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCC-CCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMP-REMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
++++++.|+.+........++.|+..+..=....... ......-.+++.. +++++ .++.++ .+..||+.
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg--------~v~lWd~~ 123 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDSG--------AVELWEIL 123 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETTS--------CEEEC---
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECCC--------EEEEeecc
Confidence 6788888876543333345778877654321110000 0000111233333 45544 454332 37778877
Q ss_pred CCcEEeCCCCC---CCCcccEEEE-ECCEEEEEccCCCCCCCCCccceE
Q 016877 199 TKKWQDLPPLP---VPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (381)
Q Consensus 199 ~~~W~~~~~~p---~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~ 243 (381)
+.+-..+.... ....-.+++. -+++.++.|+.++ .+..|+
T Consensus 124 ~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-----~v~iwd 167 (357)
T 4g56_B 124 EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-----SVKVWD 167 (357)
T ss_dssp -----CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEE
T ss_pred ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEE
Confidence 65432222111 1111122222 2566777777544 355565
No 141
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=90.71 E-value=8.2 Score=34.04 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=14.2
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYH 58 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~ 58 (381)
++.+.+.|+.++ .+..||..+
T Consensus 38 d~~~l~sgs~D~-----~v~iWd~~~ 58 (343)
T 2xzm_R 38 DSPVLISGSRDK-----TVMIWKLYE 58 (343)
T ss_dssp CCCEEEEEETTS-----CEEEEEECS
T ss_pred CCCEEEEEcCCC-----EEEEEECCc
Confidence 566778887665 566777654
No 142
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=90.59 E-value=9.2 Score=34.26 Aligned_cols=65 Identities=6% Similarity=-0.125 Sum_probs=34.4
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++.+++.|+.++ .+.+||.....-..+..... .-.+++.. ++..++.++.+ ..+..||..+
T Consensus 119 ~~~~l~~~~~dg------~i~i~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~ 180 (425)
T 1r5m_A 119 DGNSIVTGVENG------ELRLWNKTGALLNVLNFHRA----PIVSVKWNKDGTHIISMDVE--------NVTILWNVIS 180 (425)
T ss_dssp TSSEEEEEETTS------CEEEEETTSCEEEEECCCCS----CEEEEEECTTSSEEEEEETT--------CCEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeeeccCCCc----cEEEEEECCCCCEEEEEecC--------CeEEEEECCC
Confidence 456777776542 47778855444444432222 12233332 44555565543 3377888877
Q ss_pred CcEE
Q 016877 200 KKWQ 203 (381)
Q Consensus 200 ~~W~ 203 (381)
.+-.
T Consensus 181 ~~~~ 184 (425)
T 1r5m_A 181 GTVM 184 (425)
T ss_dssp TEEE
T ss_pred CcEE
Confidence 6543
No 143
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=90.35 E-value=8.1 Score=33.25 Aligned_cols=53 Identities=13% Similarity=0.245 Sum_probs=28.4
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEEC----CEEEEEecCCCCCCcccceEEEeCCCC
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQIK----NLLYVFAGYGSIDYVHSHVDIYNFTDN 148 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~~yd~~~~ 148 (381)
..+..+|..+.+|..+..+........++.+. +.+++.|+.+ ..+.+||+.+.
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~ 133 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKEN 133 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSS
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCC
Confidence 45677777776665544332222222233332 4567777654 24677777654
No 144
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.30 E-value=7.7 Score=32.96 Aligned_cols=95 Identities=9% Similarity=-0.007 Sum_probs=48.8
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCC--CCccceEEEEE--eCCEEEEEcCCCCCCCCCCcceEEEEE
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR--EMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLD 196 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd 196 (381)
++.+||....+ ..+.+||+....-..+..... ........++. .++.+|+.+... ...+.+||
T Consensus 40 ~g~l~v~~~~~------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-------~~~i~~~d 106 (286)
T 1q7f_A 40 QNDIIVADTNN------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-------THQIQIYN 106 (286)
T ss_dssp TCCEEEEEGGG------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-------GCEEEEEC
T ss_pred CCCEEEEECCC------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-------CCEEEEEC
Confidence 45788876432 358889988554443322110 00122344555 368899886310 24588999
Q ss_pred CCCCcEEeCCCCCCCCcccEEEE-ECCEEEEEcc
Q 016877 197 TETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGG 229 (381)
Q Consensus 197 ~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG 229 (381)
+....-..+.... ...-..+++ -++++|+...
T Consensus 107 ~~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~ 139 (286)
T 1q7f_A 107 QYGQFVRKFGATI-LQHPRGVTVDNKGRIIVVEC 139 (286)
T ss_dssp TTSCEEEEECTTT-CSCEEEEEECTTSCEEEEET
T ss_pred CCCcEEEEecCcc-CCCceEEEEeCCCCEEEEEC
Confidence 6655443332211 111123333 3567888754
No 145
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=89.95 E-value=4.7 Score=34.75 Aligned_cols=98 Identities=9% Similarity=0.092 Sum_probs=51.4
Q ss_pred CCEEEEEecCCC-CCCcccceEEEeCCCCeEecCCCCCC--CCccceEEEEE-eC-CEEEEEcCCCCCCCCCCcceEEEE
Q 016877 121 KNLLYVFAGYGS-IDYVHSHVDIYNFTDNTWGGRFDMPR--EMAHSHLGMVT-DG-RYIYVVTGQYGPQCRGPTAHTFVL 195 (381)
Q Consensus 121 ~~~iyv~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~~~y 195 (381)
++.+|+...... .......+.+||+.++++..+.. +. .......+++. .+ +++|+... .+.+++|
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~---------~~~l~~~ 97 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADM---------RLGLLVV 97 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEET---------TTEEEEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEEC---------CCCEEEE
Confidence 567888721000 00112358899998888876532 10 00112234444 34 78998753 1358999
Q ss_pred ECCCCcEEeC-CCCCC--C-CcccEEEE-ECCEEEEEcc
Q 016877 196 DTETKKWQDL-PPLPV--P-RYAPATQL-WRGRLHVMGG 229 (381)
Q Consensus 196 d~~~~~W~~~-~~~p~--~-r~~~~~~~-~~~~lyv~GG 229 (381)
|++ .+...+ ..... + ..-..++. -++++|+...
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 998 777666 32211 1 11223333 3567887753
No 146
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=89.85 E-value=16 Score=36.01 Aligned_cols=98 Identities=18% Similarity=0.284 Sum_probs=58.8
Q ss_pred eEEEECCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCCCC------ccceEEEEEeCCEEEEEcCCCCCCCCC
Q 016877 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREM------AHSHLGMVTDGRYIYVVTGQYGPQCRG 187 (381)
Q Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~------~r~~~~~~~~~~~iyv~GG~~~~~~~~ 187 (381)
+-++.++.||+.... ..++++|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 72 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------- 136 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------- 136 (677)
T ss_dssp CCEEETTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--------
T ss_pred CCEEECCEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--------
Confidence 335679999998652 458999998774 88754332100 0112345668899988632
Q ss_pred CcceEEEEECCCCc--EEeCCC-C-CC-CCcccEEEEECCEEEEEcc
Q 016877 188 PTAHTFVLDTETKK--WQDLPP-L-PV-PRYAPATQLWRGRLHVMGG 229 (381)
Q Consensus 188 ~~~~~~~yd~~~~~--W~~~~~-~-p~-~r~~~~~~~~~~~lyv~GG 229 (381)
...++.+|.++.+ |+.-.. - +. .....+-++.++++|+..+
T Consensus 137 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~ 182 (677)
T 1kb0_A 137 -DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNG 182 (677)
T ss_dssp -TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCB
T ss_pred -CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEec
Confidence 2468999998664 876432 1 11 1122234467888887654
No 147
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=89.60 E-value=7.6 Score=34.65 Aligned_cols=94 Identities=10% Similarity=0.032 Sum_probs=50.5
Q ss_pred EEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeC--CEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 123 LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDG--RYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 123 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
.+++.|+.+ ..+.+||..+.+.......... ...-.+++... +.+++.|+.+ ..+..+|..+.
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQNKTSFIQGMGP-GDAITGMKFNQFNTNQLFVSSIR--------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTTCEEEECCCST-TCBEEEEEEETTEEEEEEEEETT--------TEEEEEETTSC
T ss_pred CEEEEEcCC------CeEEEEeCCCcccceeeecCCc-CCceeEEEeCCCCCCEEEEEeCC--------CEEEEEECCCC
Confidence 577777754 2488899987776654332111 12223444443 4666666543 35788999877
Q ss_pred cEEeCCCCCC-CCcccEEEE-ECCEEEEEccCC
Q 016877 201 KWQDLPPLPV-PRYAPATQL-WRGRLHVMGGSG 231 (381)
Q Consensus 201 ~W~~~~~~p~-~r~~~~~~~-~~~~lyv~GG~~ 231 (381)
....+..... ...-.+++. -++++++.|+.+
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 184 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST 184 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCC
Confidence 6655543221 111223333 255666676644
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=89.51 E-value=16 Score=35.98 Aligned_cols=62 Identities=5% Similarity=-0.059 Sum_probs=33.0
Q ss_pred ceEEEeCCC-CeEecCCCC-CCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeC
Q 016877 139 HVDIYNFTD-NTWGGRFDM-PREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL 205 (381)
Q Consensus 139 ~~~~yd~~~-~~W~~~~~~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~ 205 (381)
.++++|+.+ .+-..+... .....-...+. -.+..|++...... . ...+++.+|+.+.+...+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~-~---~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD-Q---KKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT-S---SEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc-C---CeEEEEEEECCCCceEEE
Confidence 688899887 664444321 11100112223 34445555432121 1 257899999998876654
No 149
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.45 E-value=4.6 Score=42.84 Aligned_cols=100 Identities=6% Similarity=-0.075 Sum_probs=51.7
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
+++.++.|+.+ ..+.+||..+++......... .-.+++...+..++.|+.+ ..+..||..+.
T Consensus 1014 dg~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~----~v~~~~~~~~~~l~~~~~d--------g~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1014 DGKTLISSSED------SVIQVWNWQTGDYVFLQAHQE----TVKDFRLLQDSRLLSWSFD--------GTVKVWNVITG 1075 (1249)
T ss_dssp SSSCEEEECSS------SBEEEEETTTTEEECCBCCSS----CEEEEEECSSSEEEEEESS--------SEEEEEETTTT
T ss_pred CCCEEEEEcCC------CEEEEEECCCCceEEEecCCC----cEEEEEEcCCCcEEEEECC--------CcEEEEECCCC
Confidence 55667777654 358889999888776543332 1223444444345555533 35788888776
Q ss_pred cEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceE
Q 016877 201 KWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWS 243 (381)
Q Consensus 201 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~ 243 (381)
+-...-..........+..-++++++.|+.++ .+..|+
T Consensus 1076 ~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~-----~v~iwd 1113 (1249)
T 3sfz_A 1076 RIERDFTCHQGTVLSCAISSDATKFSSTSADK-----TAKIWS 1113 (1249)
T ss_dssp CCCEEEECCSSCCCCEEECSSSSSCEEECCSS-----CCCEEC
T ss_pred ceeEEEcccCCcEEEEEECCCCCEEEEEcCCC-----cEEEEE
Confidence 42111111111112222233566667766543 355555
No 150
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=89.26 E-value=9.1 Score=37.80 Aligned_cols=181 Identities=9% Similarity=0.056 Sum_probs=82.1
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCC-------CcccceEEEeCCCCeEe--cCCCCCCCCc
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSID-------YVHSHVDIYNFTDNTWG--GRFDMPREMA 161 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~~yd~~~~~W~--~~~~~~~~~~ 161 (381)
.++.+|..+.+......++.......+..-+++.++++..+... .....++++++.+..-+ .+...+.. .
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~-~ 226 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD-P 226 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-T
T ss_pred EEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-C
Confidence 57788888776531111221111222223355555565554321 12245899998876532 22222211 1
Q ss_pred cceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCcc
Q 016877 162 HSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVD 240 (381)
Q Consensus 162 r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 240 (381)
....+... -+++..++...+.. ..++++.+|..+..|+.+..-.... ...+..++.+|+...... .
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~----~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~~-------~ 293 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGW----SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEGA-------P 293 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETT----TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTTC-------T
T ss_pred EEEEEEEECCCCCEEEEEEeCCC----CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCCC-------C
Confidence 12222322 34443444332221 1467888888777787765322222 222235666665543211 1
Q ss_pred ceEeeeecCCc-cCCceEEecCCCCCCcceeEEEeCCEEEEEccCC
Q 016877 241 HWSLAVKDGKP-LEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQE 285 (381)
Q Consensus 241 ~~~~~~~~~~~-~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~ 285 (381)
.+.+.+.+.+. ....|+.+.+......-..+...+++|++....+
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~d 339 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKD 339 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEET
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEEC
Confidence 12222222211 1224877654321211123344588888876544
No 151
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=89.21 E-value=16 Score=36.16 Aligned_cols=174 Identities=11% Similarity=0.028 Sum_probs=80.7
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECC-EEEEEecCCCC------CCcccceEEEeCCCCeEe--cCCCCCC-CC
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKN-LLYVFAGYGSI------DYVHSHVDIYNFTDNTWG--GRFDMPR-EM 160 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~------~~~~~~~~~yd~~~~~W~--~~~~~~~-~~ 160 (381)
.++.+|..+.+.... .++..+....+.. ++ .||...-.... ......++++++.+..=+ .+...+. .
T Consensus 156 ~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~- 232 (693)
T 3iuj_A 156 EIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ- 232 (693)
T ss_dssp EEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG-
T ss_pred EEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC-
Confidence 577788888776543 1222222233344 65 45544332210 011245888887765421 1111111 0
Q ss_pred ccceEEE-EEeCCE-EEEEcCCCCCCCCCCcceEEEEECCCC--cEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCC
Q 016877 161 AHSHLGM-VTDGRY-IYVVTGQYGPQCRGPTAHTFVLDTETK--KWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYT 236 (381)
Q Consensus 161 ~r~~~~~-~~~~~~-iyv~GG~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~ 236 (381)
.....+. ..-+++ |++...... ..++++.+|..+. .|+.+.+-...... .....++++|+....+.
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~-----~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~---- 302 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANST-----SGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDA---- 302 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSS-----SCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC----
T ss_pred CeEEEEEEEcCCCCEEEEEEccCC-----CCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCC----
Confidence 0112222 233444 444322111 1368999998765 67766533222221 23456788998865432
Q ss_pred CCccceEeeeecCC-ccCCceEEecCCCCCCcceeEEEeCCEEEEEc
Q 016877 237 PEVDHWSLAVKDGK-PLEKEWRTEIPIPRGGPHRACVVVDDRLLVIG 282 (381)
Q Consensus 237 ~~~~~~~~~~~~~~-~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~G 282 (381)
..+.+.+.+.+ +....|+.+.+-..... .....++.|++..
T Consensus 303 ---~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 303 ---PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY 344 (693)
T ss_dssp ---TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEE
T ss_pred ---CCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEE
Confidence 11222222222 22346887655443332 4455566766654
No 152
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=89.20 E-value=4.1 Score=35.70 Aligned_cols=53 Identities=8% Similarity=0.064 Sum_probs=26.3
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE-C---CEEEEEecCCCCCCcccceEEEeCCCCe
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI-K---NLLYVFAGYGSIDYVHSHVDIYNFTDNT 149 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 149 (381)
.+..+|..+.+............-.++... + +.+++.|+.+ ..+.+||..+.+
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~ 101 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG------GNLHIWNLEAPE 101 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT------SCEEEECTTSCS
T ss_pred EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC------CeEEEEeCCCCC
Confidence 566667666654433222111111122222 2 3667777654 247788887664
No 153
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.15 E-value=17 Score=35.30 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=34.8
Q ss_pred ceEEEeCCCCe--EecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCc--EEeC
Q 016877 139 HVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK--WQDL 205 (381)
Q Consensus 139 ~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~--W~~~ 205 (381)
.+.++|.++.+ |+.-..-+........+-++.++.+|+-.+.... .....++.||.++.+ |+.-
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~---g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL---GVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG---TCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc---CCCCeEEEEECCCCcEEEEEc
Confidence 58899988774 8863211110001122334568888764321111 113568999998755 8654
No 154
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=88.95 E-value=1.6 Score=39.26 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=36.6
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCC----------CCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD----------MPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGP 188 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~----------~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 188 (381)
++.+++.|+.++ .+.+||..+.+...... .+......-.+++.. ++.+++.|+.+
T Consensus 55 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------- 121 (408)
T 4a11_B 55 EGRYMLSGGSDG------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD------- 121 (408)
T ss_dssp TCCEEEEEETTS------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-------
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-------
Confidence 457777777642 47788887664332211 000001112233333 44566666543
Q ss_pred cceEEEEECCCCcEEe
Q 016877 189 TAHTFVLDTETKKWQD 204 (381)
Q Consensus 189 ~~~~~~yd~~~~~W~~ 204 (381)
..+..||..+.+-..
T Consensus 122 -~~i~iwd~~~~~~~~ 136 (408)
T 4a11_B 122 -KTLKVWDTNTLQTAD 136 (408)
T ss_dssp -SEEEEEETTTTEEEE
T ss_pred -CeEEEeeCCCCccce
Confidence 357888988776443
No 155
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=88.86 E-value=10 Score=32.19 Aligned_cols=119 Identities=8% Similarity=0.024 Sum_probs=60.2
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCc-eEEE-ECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDG-AAIQ-IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
..+..+|+. .+...... +...... +++. -++.+|+..... ..+.+||+. .+.+... ++.. .....++
T Consensus 36 ~~v~~~d~~-~~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i 104 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPL-PTPDAKVMCLTISSDGEVWFTENAA------NKIGRITKK-GIIKEYT-LPNP-DSAPYGI 104 (299)
T ss_dssp TEEEEECTT-CCEEEEEC-SSTTCCEEEEEECTTSCEEEEETTT------TEEEEECTT-SCEEEEE-CSST-TCCEEEE
T ss_pred CcEEEEcCC-CCeEEecC-CcccCceeeEEECCCCCEEEeCCCC------CeEEEECCC-CcEEEEe-CCCc-CCCceee
Confidence 357788887 66655431 2111222 2222 256788875321 248888886 4454432 2211 1223445
Q ss_pred EEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CCEEEEEc
Q 016877 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMG 228 (381)
Q Consensus 168 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~G 228 (381)
+.. ++.+|+.... ...++++|+ +.+............-..++.. ++++|+..
T Consensus 105 ~~~~~g~l~v~~~~--------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 105 TEGPNGDIWFTEMN--------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp EECTTSCEEEEETT--------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEecC--------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 544 5788887431 245889998 5555443211111222233333 56788764
No 156
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=88.53 E-value=11 Score=36.19 Aligned_cols=92 Identities=11% Similarity=0.067 Sum_probs=46.2
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE-CC-EEEEEecCCCCCCcccceEEEeC--CCCeEecCCCCCCCCccceE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNF--TDNTWGGRFDMPREMAHSHL 165 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~--~~~~W~~~~~~~~~~~r~~~ 165 (381)
..+..+|..+.+-... ++....-|.++.. ++ ++|+.+. + +.+.+||+ .+.+-.. .++.. ....
T Consensus 159 ~~V~v~D~~t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~-d------~~V~v~D~~~~t~~~~~--~i~~g--~~p~ 225 (543)
T 1nir_A 159 GQIALVDGDSKKIVKV--IDTGYAVHISRMSASGRYLLVIGR-D------ARIDMIDLWAKEPTKVA--EIKIG--IEAR 225 (543)
T ss_dssp TEEEEEETTTCCEEEE--EECSTTEEEEEECTTSCEEEEEET-T------SEEEEEETTSSSCEEEE--EEECC--SEEE
T ss_pred CeEEEEECCCceEEEE--EecCcccceEEECCCCCEEEEECC-C------CeEEEEECcCCCCcEEE--EEecC--CCcc
Confidence 4577788877654322 2211123344333 44 6666653 2 45889999 5554322 22221 1223
Q ss_pred EEEEe-----CC-EEEEEcCCCCCCCCCCcceEEEEECCCCcE
Q 016877 166 GMVTD-----GR-YIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (381)
Q Consensus 166 ~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (381)
.++.. ++ .+|+.. +. .+.+..+|..+.+-
T Consensus 226 ~va~sp~~~~dg~~l~v~~-~~-------~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGA-YW-------PPQFAIMDGETLEP 260 (543)
T ss_dssp EEEECCSTTCTTTEEEEEE-EE-------SSEEEEEETTTCCE
T ss_pred eEEeCCCcCCCCCEEEEEE-cc-------CCeEEEEecccccc
Confidence 34443 34 566543 21 25577889887653
No 157
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.47 E-value=20 Score=35.31 Aligned_cols=180 Identities=13% Similarity=0.079 Sum_probs=80.8
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE-CCEEEEEecCCCCC----------CcccceEEEeCCCCeEe--cCCCCC
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSID----------YVHSHVDIYNFTDNTWG--GRFDMP 157 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~----------~~~~~~~~yd~~~~~W~--~~~~~~ 157 (381)
.++.+|..+.+...... +... ....+.. +++.++++..+... .....++++++.+.+-+ .+...+
T Consensus 152 ~i~v~d~~tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp EEEEEETTTTEEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEEEECCCCCCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC
Confidence 57788888777654321 1111 1222222 55444444333220 11235888898877632 121111
Q ss_pred CCCccceEEEE-EeCC-EEEEEcCCCCCCCCCCcceEEEEECCC------C--cEEeCCCCCCCCcccEEEEECCEEEEE
Q 016877 158 REMAHSHLGMV-TDGR-YIYVVTGQYGPQCRGPTAHTFVLDTET------K--KWQDLPPLPVPRYAPATQLWRGRLHVM 227 (381)
Q Consensus 158 ~~~~r~~~~~~-~~~~-~iyv~GG~~~~~~~~~~~~~~~yd~~~------~--~W~~~~~~p~~r~~~~~~~~~~~lyv~ 227 (381)
.. ........ .-++ .|++... .+.. ..++++.+|..+ . .++.+........ .....-++.||+.
T Consensus 230 ~~-~~~~~~~~~SpDg~~l~~~~~-~~~~---~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~ 303 (710)
T 2xdw_A 230 DE-PKWMGGAELSDDGRYVLLSIR-EGCD---PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFK 303 (710)
T ss_dssp TC-TTCEEEEEECTTSCEEEEEEE-CSSS---SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEE
T ss_pred CC-CeEEEEEEEcCCCCEEEEEEE-ccCC---CccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEE
Confidence 10 11222232 2344 4444432 2211 146899999876 3 5666653222221 2233456788888
Q ss_pred ccCCCCCCCCCccceEeeeecCCcc-CCceEEecCCCCCCcceeEEEe-CCEEEEEccCC
Q 016877 228 GGSGENRYTPEVDHWSLAVKDGKPL-EKEWRTEIPIPRGGPHRACVVV-DDRLLVIGGQE 285 (381)
Q Consensus 228 GG~~~~~~~~~~~~~~~~~~~~~~~-~~~W~~~~~~p~~~~~~~~~~~-~~~l~v~GG~~ 285 (381)
+..... .+.+.+.+.+.. ...|+.+.+......-..+... ++++++....+
T Consensus 304 s~~~~~-------~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 304 TNRHSP-------NYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp ECTTCT-------TCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred ECCCCC-------CCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 653221 122222222211 1258876543221111233445 67777766543
No 158
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.44 E-value=19 Score=34.78 Aligned_cols=99 Identities=15% Similarity=0.228 Sum_probs=57.8
Q ss_pred eEEEECCEEEEEecCCCCCCcccceEEEeC-CCC--eEecCCCCCCCCc------cceEEEEEeCCEEEEEcCCCCCCCC
Q 016877 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNF-TDN--TWGGRFDMPREMA------HSHLGMVTDGRYIYVVTGQYGPQCR 186 (381)
Q Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~~~--~W~~~~~~~~~~~------r~~~~~~~~~~~iyv~GG~~~~~~~ 186 (381)
+-++.++.||+.... ...++++|. ++. .|+.-...+.... ....+.++.+++||+...
T Consensus 57 ~P~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 123 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------- 123 (571)
T ss_dssp CCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred ccEEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------
Confidence 345679999998652 135899998 665 4987433221000 012245678999998642
Q ss_pred CCcceEEEEECCCC--cEEeC-CCCCCC-CcccEEEEECCEEEEEcc
Q 016877 187 GPTAHTFVLDTETK--KWQDL-PPLPVP-RYAPATQLWRGRLHVMGG 229 (381)
Q Consensus 187 ~~~~~~~~yd~~~~--~W~~~-~~~p~~-r~~~~~~~~~~~lyv~GG 229 (381)
...++.+|.++. .|+.- ...+.. ....+-++.++++|+-..
T Consensus 124 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 124 --NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCS 168 (571)
T ss_dssp --TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECB
T ss_pred --CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEec
Confidence 246899999876 48753 221111 112233457888887653
No 159
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.07 E-value=16 Score=33.57 Aligned_cols=63 Identities=14% Similarity=0.180 Sum_probs=35.4
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCCCeEec--CCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG--RFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~--~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
+.+++.|+.+ ..+.+||+.+.+... +..... .-.+++..++.+++.|+.+ ..+..||..+
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h~~----~v~~~~~sd~~~l~s~~~d--------~~v~vwd~~~ 271 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFGHKH----FVSSICCGKDYLLLSAGGD--------DKIFAWDWKT 271 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCCCSS----CEEEEEECSTTEEEEEESS--------SEEEEEETTT
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecCCCC----ceEEEEECCCCEEEEEeCC--------CeEEEEECCC
Confidence 7788888764 347788887664332 111111 1122222256666676633 3588889887
Q ss_pred CcE
Q 016877 200 KKW 202 (381)
Q Consensus 200 ~~W 202 (381)
.+-
T Consensus 272 ~~~ 274 (450)
T 2vdu_B 272 GKN 274 (450)
T ss_dssp CCE
T ss_pred CcE
Confidence 653
No 160
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.96 E-value=15 Score=33.21 Aligned_cols=61 Identities=16% Similarity=0.191 Sum_probs=35.6
Q ss_pred eEEEeCCC--CeEecCCCCCCCCccceEEEEEe---CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC
Q 016877 140 VDIYNFTD--NTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (381)
Q Consensus 140 ~~~yd~~~--~~W~~~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (381)
+++++... .+|+.+.+... ...-++++.. ++.||+.+.. +. .-.-+++.+-...+|+.+..
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~--~~~v~~i~~dp~~~~~l~~g~~~-g~----~g~gl~~s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFL--GHTIHHIVQDPREPERMLMAART-GH----LGPTVFRSDDGGGNWTEATR 98 (394)
T ss_dssp EEEEEECTTSCSEEEEEEEST--TSEEEEEEECSSSTTCEEEEEEC-------CCEEEEEESSTTSCCEECSB
T ss_pred eEEEECCCCCCCceECCccCC--CCceEEEEECCCCCCeEEEEecC-CC----CCccEEEeCCCCCCceECCc
Confidence 66677654 68997642111 1223445554 5678876532 11 01257888878889999863
No 161
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.18 E-value=6.8 Score=34.95 Aligned_cols=127 Identities=14% Similarity=0.061 Sum_probs=63.1
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE--CCE-EEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNL-LYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
.++.+|..+.+...+.. ........... ++. |++... .........++.+|+.+.+++.+.. ..+ .......
T Consensus 169 ~l~~~d~~~g~~~~~~~--~~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~-~~~~~~~ 243 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQ--DTAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAE-GESCTHE 243 (396)
T ss_dssp EEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCT-TEEEEEE
T ss_pred eEEEEECCCCcEEeecc--CCcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCC-Cccccce
Confidence 57778887777665542 11211222222 243 444432 2221122469999998888777654 211 1112222
Q ss_pred EE-eCCE-EEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE-CCEEEEEcc
Q 016877 168 VT-DGRY-IYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGG 229 (381)
Q Consensus 168 ~~-~~~~-iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG 229 (381)
+. -+++ |+... ..... ....++++|+.+.+.+.+...+. .. ....- +++++++.+
T Consensus 244 ~~spdg~~l~~~~-~~~~~---~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 244 FWIPDGSAMAYVS-YFKGQ---TDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp EECTTSSCEEEEE-EETTT---CCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEE
T ss_pred EECCCCCEEEEEe-cCCCC---ccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEec
Confidence 33 2444 44442 22111 12459999999887766654442 11 22233 677666654
No 162
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=87.12 E-value=14 Score=32.04 Aligned_cols=129 Identities=9% Similarity=0.003 Sum_probs=57.6
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
..+..+|..+.+-.. .+........++.+ ++.+++.|+.+. .+.++|.....-..+..... .-..+
T Consensus 87 ~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~------~i~vwd~~~~~~~~~~~h~~----~v~~~ 154 (319)
T 3frx_A 87 KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRDK------TIKVWTIKGQCLATLLGHND----WVSQV 154 (319)
T ss_dssp SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETTS------CEEEEETTSCEEEEECCCSS----CEEEE
T ss_pred CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCeEEEEeccCC----cEEEE
Confidence 356677776654211 11111111222222 456777777653 46677876554333322111 11122
Q ss_pred EEe-------CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCc
Q 016877 168 VTD-------GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEV 239 (381)
Q Consensus 168 ~~~-------~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~ 239 (381)
... ++.+++.|+.++ .+..+|..+.+-...-. .....-.+++. -++++++.|+.++ .+
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d~--------~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~dg-----~i 220 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGNDK--------MVKAWNLNQFQIEADFI-GHNSNINTLTASPDGTLIASAGKDG-----EI 220 (319)
T ss_dssp EECCC------CCEEEEEETTS--------CEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSSEEEEEETTC-----EE
T ss_pred EEccCCCCCCCccEEEEEeCCC--------EEEEEECCcchhheeec-CCCCcEEEEEEcCCCCEEEEEeCCC-----eE
Confidence 222 223555665433 37778887654322100 01111112222 2566777777543 45
Q ss_pred cceEe
Q 016877 240 DHWSL 244 (381)
Q Consensus 240 ~~~~~ 244 (381)
..|++
T Consensus 221 ~iwd~ 225 (319)
T 3frx_A 221 MLWNL 225 (319)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 55653
No 163
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=87.02 E-value=12 Score=32.58 Aligned_cols=95 Identities=11% Similarity=0.089 Sum_probs=52.2
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
+++||+.+..+ ..+++||+.+++...+...+. ..-.+++. -++++|+....+.. ....+++||+++
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~---~~~~~i~~~~dg~l~v~~~~~~~----~~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSHK---ANPAAIKIHKDGRLFVCYLGDFK----STGGIFAATENG 121 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECSS---SSEEEEEECTTSCEEEEECTTSS----SCCEEEEECTTS
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCC---CCcceEEECCCCcEEEEeCCCCC----CCceEEEEeCCC
Confidence 56788876532 358999999888776432111 12234444 36678887532211 125699999998
Q ss_pred CcEEe-CCCCCCCCcccEEEE-ECCEEEEEc
Q 016877 200 KKWQD-LPPLPVPRYAPATQL-WRGRLHVMG 228 (381)
Q Consensus 200 ~~W~~-~~~~p~~r~~~~~~~-~~~~lyv~G 228 (381)
..-+. +........-..++. -++++|+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEE
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEe
Confidence 77552 222211111222222 256788764
No 164
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=86.88 E-value=17 Score=32.56 Aligned_cols=49 Identities=16% Similarity=0.299 Sum_probs=25.1
Q ss_pred eEEEEECCCCcEEeCC--CCCCCCcc--cEEEE--ECCEEEEEccCCCCCCCCCccceEe
Q 016877 191 HTFVLDTETKKWQDLP--PLPVPRYA--PATQL--WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 191 ~~~~yd~~~~~W~~~~--~~p~~r~~--~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
.+..||..+.+-...- ..+..... .++.. .++.+++.|+.++ .+..|++
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~ 235 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDL 235 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEET
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEEC
Confidence 3778888876543321 22222111 12222 2567888887654 4566654
No 165
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.74 E-value=24 Score=34.25 Aligned_cols=98 Identities=11% Similarity=0.163 Sum_probs=55.4
Q ss_pred eEEEECCEEEEEecCCCCCCcccceEEEeC-CCC--eEecCCCCCCCC---c---cceEEEEE--eCCE----EEEEcCC
Q 016877 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNF-TDN--TWGGRFDMPREM---A---HSHLGMVT--DGRY----IYVVTGQ 180 (381)
Q Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~~~--~W~~~~~~~~~~---~---r~~~~~~~--~~~~----iyv~GG~ 180 (381)
+-++.++.||+.... ...++++|. ++. .|+.-...+... . ....+.++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp CCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred ccEEECCEEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 345679999998752 135899998 666 498754332100 0 01123455 6777 887532
Q ss_pred CCCCCCCCcceEEEEECCCCc--EEeCCCCCCC--CcccEEEEECCEEEEEc
Q 016877 181 YGPQCRGPTAHTFVLDTETKK--WQDLPPLPVP--RYAPATQLWRGRLHVMG 228 (381)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~lyv~G 228 (381)
...++.+|.++.+ |+.-..-+.. ....+-++.++++|+-.
T Consensus 130 --------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~ 173 (599)
T 1w6s_A 130 --------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGS 173 (599)
T ss_dssp --------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECC
T ss_pred --------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEe
Confidence 2458899988765 8753211100 11223345788887654
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=86.69 E-value=14 Score=32.07 Aligned_cols=151 Identities=9% Similarity=-0.028 Sum_probs=69.9
Q ss_pred EcCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEe--ee-cccccccccCcceEeecCCCCCeEEcc
Q 016877 32 VADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVK--TK-KDVVPKRILPATFQDLPAPELKWEKMK 106 (381)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~W~~l~ 106 (381)
.++.+|+.++.++ .+..||+.+++ ..++........++... +. .+... .....+..+|..+.+-...-
T Consensus 9 ~~~~~~v~~~~~~-----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~--~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 9 AGHEYMIVTNYPN-----NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN--NHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp TTCEEEEEEETTT-----EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE--TTTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCC-----eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe--CCCCcEEEEeCCCCcEEEEE
Confidence 3678888886443 78999999887 33332110011222211 11 11111 12346888888776543322
Q ss_pred CCCC-----CCCCceEEEE-CC-EEEEEecC--CCCCCc---ccceEEEeCCCCeEec-CCCCCCCCccceEEEEE-eCC
Q 016877 107 AAPV-----PRLDGAAIQI-KN-LLYVFAGY--GSIDYV---HSHVDIYNFTDNTWGG-RFDMPREMAHSHLGMVT-DGR 172 (381)
Q Consensus 107 ~~p~-----~r~~~~~~~~-~~-~iyv~GG~--~~~~~~---~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~-~~~ 172 (381)
..+. ...-..++.. ++ .+|+.... .....+ ...+.+||+.+++-.. +...+.+ +...+++. -++
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg 159 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP--RQVYLMRAADDG 159 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC--SSCCCEEECTTS
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC--CcccceeECCCC
Confidence 2221 1111223332 44 56655421 000000 1468899988743221 1111111 11122323 355
Q ss_pred EEEEEcCCCCCCCCCCcceEEEEECCCCcE
Q 016877 173 YIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (381)
Q Consensus 173 ~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (381)
++|+.++ +++++|+.+.+-
T Consensus 160 ~l~~~~~-----------~i~~~d~~~~~~ 178 (349)
T 1jmx_B 160 SLYVAGP-----------DIYKMDVKTGKY 178 (349)
T ss_dssp CEEEESS-----------SEEEECTTTCCE
T ss_pred cEEEccC-----------cEEEEeCCCCce
Confidence 6777432 278888877654
No 167
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=86.58 E-value=13 Score=36.70 Aligned_cols=68 Identities=7% Similarity=0.034 Sum_probs=38.2
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCC---eEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN---TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
+++.++++.. ..++++|..++ .-..+..... ........-+++..+++. ...++.+|.
T Consensus 119 Dg~~l~~~~~-------~~i~~~d~~~~~~~~~~~l~~~~~---~~~~~~~SPDG~~la~~~---------~~~i~~~d~ 179 (741)
T 2ecf_A 119 DAQRLLFPLG-------GELYLYDLKQEGKAAVRQLTHGEG---FATDAKLSPKGGFVSFIR---------GRNLWVIDL 179 (741)
T ss_dssp TSSEEEEEET-------TEEEEEESSSCSTTSCCBCCCSSS---CEEEEEECTTSSEEEEEE---------TTEEEEEET
T ss_pred CCCEEEEEeC-------CcEEEEECCCCCcceEEEcccCCc---ccccccCCCCCCEEEEEe---------CCcEEEEec
Confidence 5555555543 46999999887 5554433222 111222223455444442 136999999
Q ss_pred CCCcEEeCCC
Q 016877 198 ETKKWQDLPP 207 (381)
Q Consensus 198 ~~~~W~~~~~ 207 (381)
.+.+...+..
T Consensus 180 ~~g~~~~~~~ 189 (741)
T 2ecf_A 180 ASGRQMQLTA 189 (741)
T ss_dssp TTTEEEECCC
T ss_pred CCCCEEEecc
Confidence 9888776643
No 168
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=86.23 E-value=14 Score=35.06 Aligned_cols=91 Identities=9% Similarity=-0.005 Sum_probs=42.7
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
+++.++.|+.+ ..+.+||.....-..+..... .-.+++. -+++.++.++.+ ..+..||...
T Consensus 396 dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~~~~----~v~~~~~s~d~~~l~~~~~d--------~~v~~w~~~~ 457 (577)
T 2ymu_A 396 DGQTIASASDD------KTVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDDQTIASASDD--------KTVKLWNRNG 457 (577)
T ss_dssp TSSCEEEEETT------SEEEEECTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETT--------SEEEEEETTS
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCEEEEecCCCC----CeEEEEECCCCCEEEEEcCC--------CEEEEEECCC
Confidence 45666777654 246778865443333322221 1122333 345566666533 3467778655
Q ss_pred CcEEeCCCCCCCCcccEEEE-ECCEEEEEccCC
Q 016877 200 KKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSG 231 (381)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~ 231 (381)
..-..+.... ..-.+++. -++++++.++.+
T Consensus 458 ~~~~~~~~~~--~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 458 QLLQTLTGHS--SSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp CEEEEEECCS--SCEEEEEECTTSCEEEEEETT
T ss_pred CEEEEEcCCC--CCEEEEEEcCCCCEEEEEeCC
Confidence 4433332211 11122222 256677776643
No 169
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=86.20 E-value=5.5 Score=36.04 Aligned_cols=99 Identities=8% Similarity=0.025 Sum_probs=51.1
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
+++.++.|+.+ ..+.++|..+.+-...-.-.. ..-.+++.. ++..++.|+.+ ..+..+|..+
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l~s~s~d--------~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMILQGHE---QDIYSLDYFPSGDKLVSGSGD--------RTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCCS---SCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEccCC---CCEEEEEEcCCCCEEEEecCC--------CcEEEEECCC
Confidence 55677777764 247888988776443211111 112233332 44455566543 3477889887
Q ss_pred CcEEeCCCCCCCCcccEEEEE--CCEEEEEccCCCCCCCCCccceE
Q 016877 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWS 243 (381)
Q Consensus 200 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 243 (381)
.+....-... ....+++.. ++++++.|+.++ .+..|+
T Consensus 197 ~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd 235 (393)
T 1erj_A 197 GQCSLTLSIE--DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWD 235 (393)
T ss_dssp TEEEEEEECS--SCEEEEEECSTTCCEEEEEETTS-----CEEEEE
T ss_pred CeeEEEEEcC--CCcEEEEEECCCCCEEEEEcCCC-----cEEEEE
Confidence 7643321111 111222332 567777777543 355555
No 170
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=86.13 E-value=13 Score=33.10 Aligned_cols=182 Identities=11% Similarity=0.033 Sum_probs=81.3
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEee-ecccccccccCcceEeecCCCCCeEEccCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKT-KKDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
++...+.|+.++ .+..||..+++ ..+.... ..-..+.... +............+..+|..+.+-...-...
T Consensus 138 dg~~l~sgs~d~-----~i~iwd~~~~~~~~~~~~h~-~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 211 (344)
T 4gqb_B 138 SGTQAVSGSKDI-----CIKVWDLAQQVVLSSYRAHA-AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS 211 (344)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEEECCCS-SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC--
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCcC-CceEEEEecCCCCCceeeeccccccccccccccceeeeeecc
Confidence 566677776555 67889998887 3333211 1111111100 0000000112235667777765532211111
Q ss_pred CCCCCceEEEE---CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-C-CEEEEEcCCCCCC
Q 016877 110 VPRLDGAAIQI---KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G-RYIYVVTGQYGPQ 184 (381)
Q Consensus 110 ~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~ 184 (381)
.......++.+ ++++++.|+.++ .+.+||..+.+- +..+... ...-.+++.. + .++++.|+.++
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg------~v~~wd~~~~~~--~~~~~~h-~~~v~~v~fsp~g~~~lasgs~D~-- 280 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENG------TVSLVDTKSTSC--VLSSAVH-SQCVTGLVFSPHSVPFLASLSEDC-- 280 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTS------EEEEEESCC--C--CEEEECC-SSCEEEEEECSSSSCCEEEEETTS--
T ss_pred eeeccceeeeecCCCCcceEEeccCC------cEEEEECCCCcE--EEEEcCC-CCCEEEEEEccCCCeEEEEEeCCC--
Confidence 11111222222 456888887642 477889876532 1112111 1112233333 2 35566666543
Q ss_pred CCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE--CCEEEEEccCCCCCCCCCccceEe
Q 016877 185 CRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 185 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
.+.+||..+.+-.... .....-.+++.. +..+++.||.++ .+..|++
T Consensus 281 ------~i~vwd~~~~~~~~~~--~H~~~V~~v~~sp~~~~llas~s~D~-----~v~~w~v 329 (344)
T 4gqb_B 281 ------SLAVLDSSLSELFRSQ--AHRDFVRDATWSPLNHSLLTTVGWDH-----QVVHHVV 329 (344)
T ss_dssp ------CEEEECTTCCEEEEEC--CCSSCEEEEEECSSSTTEEEEEETTS-----CEEEEEC
T ss_pred ------eEEEEECCCCcEEEEc--CCCCCEEEEEEeCCCCeEEEEEcCCC-----eEEEEEC
Confidence 3778888876543321 111122233322 345777777543 4566664
No 171
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=86.06 E-value=21 Score=32.79 Aligned_cols=63 Identities=13% Similarity=0.171 Sum_probs=31.6
Q ss_pred eeEe-C-CCCCeEEcCCCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCCCceEE
Q 016877 310 VYML-D-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVL 377 (381)
Q Consensus 310 v~~y-d-~~~~W~~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 377 (381)
+|.. + ....++.+..++.. .. -.+++...+.+++..+......... ..-++|.++.++++|+.
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~-~~-v~~~~~~~~~~~v~~~~~~~~~~~~---~~i~v~~~~~~~~~~~~ 398 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFP-YN-VISLSAHNDEFQVTLDNKESSGVQK---NFAKFIEYNLNENSFVV 398 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECS-SC-EEEEEEETTEEEEEECCTTCCSSCC---CSEEEEEEETTTTEEEE
T ss_pred EEEeccCCCCceeeccEeccC-Cc-eEEEEecCCcEEEEEecccCCCCCC---cceEEEEEEcCCCeEEE
Confidence 4555 2 33455555444333 22 2344556677777765432110000 11257888888888853
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=85.87 E-value=10 Score=33.03 Aligned_cols=149 Identities=7% Similarity=-0.097 Sum_probs=71.8
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--eecccccccc--cCcceEeecCCCCCeEEc-c
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--TKKDVVPKRI--LPATFQDLPAPELKWEKM-K 106 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~W~~l-~ 106 (381)
++.||+.+..+ ..+..||+.+++ ..+.........+++.. +..+...... ....+..+|+.+.....+ .
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~ 129 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE 129 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc
Confidence 56788876533 367889998877 33321111111222211 1111111100 113688888887765432 2
Q ss_pred CCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-C-CEEEEEcCCCC
Q 016877 107 AAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G-RYIYVVTGQYG 182 (381)
Q Consensus 107 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~ 182 (381)
..... .....+.+ ++++|+.............++++|+.+.+...+..-. ....+++.. + +.+|+....
T Consensus 130 ~~~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~~~-- 202 (333)
T 2dg1_A 130 DLSTA-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI----SVANGIALSTDEKVLWVTETT-- 202 (333)
T ss_dssp SSSSC-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE----SSEEEEEECTTSSEEEEEEGG--
T ss_pred cCccC-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC----CcccceEECCCCCEEEEEeCC--
Confidence 21111 12222222 5678876533211112346899998877665542110 112234433 3 358876421
Q ss_pred CCCCCCcceEEEEECCC
Q 016877 183 PQCRGPTAHTFVLDTET 199 (381)
Q Consensus 183 ~~~~~~~~~~~~yd~~~ 199 (381)
...+++||+.+
T Consensus 203 ------~~~i~~~d~~~ 213 (333)
T 2dg1_A 203 ------ANRLHRIALED 213 (333)
T ss_dssp ------GTEEEEEEECT
T ss_pred ------CCeEEEEEecC
Confidence 35688898864
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=85.62 E-value=14 Score=32.74 Aligned_cols=62 Identities=6% Similarity=0.016 Sum_probs=35.9
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCC
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR 158 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~ 158 (381)
.++.+|..+.+-.++...+..........-+++.+++...+ ..++++|+.+.+-..+...+.
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~------~~l~~~d~~~g~~~~~~~~~~ 122 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG------RNLMRVDLATLEENVVYQVPA 122 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT------TEEEEEETTTCCEEEEEECCT
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC------CeEEEEECCCCcceeeeechh
Confidence 57788888877777665443322222333455434444322 358999999887665544443
No 174
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=85.38 E-value=30 Score=34.03 Aligned_cols=237 Identities=11% Similarity=0.006 Sum_probs=106.8
Q ss_pred ceEeecCCCCCeEEccCCCCCCCC----ceE--EEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccce
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLD----GAA--IQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSH 164 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~----~~~--~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~ 164 (381)
.+++.+.....|+.+.+.+.--.. ... .+-+++.+++.-...... ...++++|+.+++......++. ...
T Consensus 95 ~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~-~~~i~v~dl~tg~~~~~~~~~~--~~~- 170 (695)
T 2bkl_A 95 ILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAAD-EAVLHVIDVDSGEWSKVDVIEG--GKY- 170 (695)
T ss_dssp EEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCS-CCEEEEEETTTCCBCSSCCBSC--CTT-
T ss_pred EEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCc-eEEEEEEECCCCCCcCCcccCc--ccc-
Confidence 456666666677776543321111 111 222555555443221111 2369999999988652112221 111
Q ss_pred EEEEE-eCCEEEEEcCCCCCCC-----CCCcceEEEEECCCCcE--EeCCCCCC-CCcccEEEE-ECCEEEEEccCCCCC
Q 016877 165 LGMVT-DGRYIYVVTGQYGPQC-----RGPTAHTFVLDTETKKW--QDLPPLPV-PRYAPATQL-WRGRLHVMGGSGENR 234 (381)
Q Consensus 165 ~~~~~-~~~~iyv~GG~~~~~~-----~~~~~~~~~yd~~~~~W--~~~~~~p~-~r~~~~~~~-~~~~lyv~GG~~~~~ 234 (381)
...+. -+++.++++..+.... .....++++++..+..- ..+-..+. +........ -+++.+++......
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~- 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW- 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-
Confidence 22333 3555555554433200 01245689999887652 22222221 122222222 24554444332210
Q ss_pred CCCCccceEeeeecCCccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC
Q 016877 235 YTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD 314 (381)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 314 (381)
...+.|.+ +..+.+|+.+.+-..... ..+..++.+|+....... ...++.+|
T Consensus 250 --~~~~l~~~-----~~~~~~~~~l~~~~~~~~--~~~~~~g~l~~~s~~~~~-------------------~~~l~~~d 301 (695)
T 2bkl_A 250 --SENDVYWK-----RPGEKDFRLLVKGVGAKY--EVHAWKDRFYVLTDEGAP-------------------RQRVFEVD 301 (695)
T ss_dssp --TEEEEEEE-----CTTCSSCEEEEECSSCCE--EEEEETTEEEEEECTTCT-------------------TCEEEEEB
T ss_pred --CceEEEEE-----cCCCCceEEeecCCCceE--EEEecCCcEEEEECCCCC-------------------CCEEEEEe
Confidence 12233332 344556776654322221 223356665555432211 23478877
Q ss_pred -CCCC---eEEcCCCCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecceEEEEcCC
Q 016877 315 -DEMK---WKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNT 372 (381)
Q Consensus 315 -~~~~---W~~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 372 (381)
.+.. |+.+.+-. +.... ..+...+++|++....+... .++.++++.
T Consensus 302 ~~~~~~~~~~~l~~~~-~~~~l-~~~~~~~~~lv~~~~~dg~~----------~l~~~~~~g 351 (695)
T 2bkl_A 302 PAKPARASWKEIVPED-SSASL-LSVSIVGGHLSLEYLKDATS----------EVRVATLKG 351 (695)
T ss_dssp TTBCSGGGCEEEECCC-SSCEE-EEEEEETTEEEEEEEETTEE----------EEEEEETTC
T ss_pred CCCCCccCCeEEecCC-CCCeE-EEEEEECCEEEEEEEECCEE----------EEEEEeCCC
Confidence 4433 87764321 11111 22344588888877654332 467777644
No 175
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=84.66 E-value=18 Score=30.84 Aligned_cols=11 Identities=18% Similarity=0.271 Sum_probs=9.6
Q ss_pred eeeeeeCCCce
Q 016877 50 IASNWSPYHNS 60 (381)
Q Consensus 50 ~~~~~d~~~~~ 60 (381)
++..||..+++
T Consensus 46 tV~iWd~~tg~ 56 (318)
T 4ggc_A 46 SVYLWSASSGD 56 (318)
T ss_dssp EEEEEETTTCC
T ss_pred EEEEEECCCCC
Confidence 68899999887
No 176
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=84.45 E-value=18 Score=33.81 Aligned_cols=48 Identities=19% Similarity=0.342 Sum_probs=33.0
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeC--CCCCCCCcccEEEEECCEEEEEccCC
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL--PPLPVPRYAPATQLWRGRLHVMGGSG 231 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~ 231 (381)
++++|+|-| +..|+||..+.+...- +.+| . .-++....+++|+|-|..
T Consensus 158 ~~~~yfFkG----------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~~ 207 (460)
T 1qhu_A 158 DEGILFFQG----------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGNQ 207 (460)
T ss_dssp SSEEEEEET----------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETTE
T ss_pred CCeEEEEec----------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECCE
Confidence 678899976 5689999988765432 1222 2 345556689999998853
No 177
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=84.27 E-value=18 Score=30.63 Aligned_cols=21 Identities=14% Similarity=0.249 Sum_probs=12.3
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTD 147 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~ 147 (381)
++.+++.|+.++ .+..+|...
T Consensus 70 ~~~~l~~~~~dg------~i~~~~~~~ 90 (313)
T 3odt_A 70 EKELLLFGGKDT------MINGVPLFA 90 (313)
T ss_dssp TTTEEEEEETTS------CEEEEETTC
T ss_pred CCCEEEEecCCC------eEEEEEeee
Confidence 556777777543 355566543
No 178
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=84.13 E-value=24 Score=31.94 Aligned_cols=94 Identities=10% Similarity=0.081 Sum_probs=53.3
Q ss_pred CcceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEE
Q 016877 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 166 (381)
...++.+|..+.+..++-.+......-.++.+ ++..++.|+.++ .+.++|..+.+-.....-.. ....
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~~~~~~h~----~~v~ 193 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLRNMTSHS----ARVG 193 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCS----SCEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEEEEEeCCC----CceE
Confidence 45788889888877665544443333333333 557777887653 47889988776433211111 1122
Q ss_pred EEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
+...++.+.+.|+.++ .+..+|....
T Consensus 194 ~~s~~~~~l~sgs~d~--------~i~~~d~~~~ 219 (420)
T 4gga_A 194 SLSWNSYILSSGSRSG--------HIHHHDVRVA 219 (420)
T ss_dssp EEEEETTEEEEEETTS--------EEEEEETTSS
T ss_pred EEeeCCCEEEEEeCCC--------ceeEeeeccc
Confidence 3344556666766433 4566776554
No 179
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=84.10 E-value=18 Score=35.56 Aligned_cols=78 Identities=13% Similarity=0.097 Sum_probs=45.0
Q ss_pred EEEECCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEE
Q 016877 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFV 194 (381)
Q Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 194 (381)
.++.+++||+... ...+.++|.++.+ |+.-..-+........+-++.++.+|+-.+.... .....++.
T Consensus 113 ~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~---~~~g~v~a 182 (668)
T 1kv9_A 113 VALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY---GVRGFVSA 182 (668)
T ss_dssp CEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT---CCBCEEEE
T ss_pred eEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCc---CCCCEEEE
Confidence 3456888887542 1358999998774 8864321111112223345578888874321111 12457999
Q ss_pred EECCCCc--EEe
Q 016877 195 LDTETKK--WQD 204 (381)
Q Consensus 195 yd~~~~~--W~~ 204 (381)
||+++.+ |+.
T Consensus 183 ~D~~tG~~~W~~ 194 (668)
T 1kv9_A 183 YDADTGKLAWRF 194 (668)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCcEEEEe
Confidence 9998765 865
No 180
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=83.76 E-value=17 Score=31.41 Aligned_cols=69 Identities=10% Similarity=0.014 Sum_probs=32.9
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCCCeEe---cCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWG---GRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~---~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
+.+++.||.++ .+.++|+.+.+-. ....+... ...-.+++. .++++.+.|+.++ .+..++.
T Consensus 51 ~~~l~S~s~D~------~i~vWd~~~~~~~~~~~~~~l~~h-~~~V~~~~~s~dg~~l~s~~~d~--------~i~~~~~ 115 (340)
T 4aow_A 51 PDMILSASRDK------TIIMWKLTRDETNYGIPQRALRGH-SHFVSDVVISSDGQFALSGSWDG--------TLRLWDL 115 (340)
T ss_dssp TTEEEEEETTS------CEEEEEECCSSSCSEEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEET
T ss_pred CCEEEEEcCCC------eEEEEECCCCCcccceeeEEEeCC-CCCEEEEEECCCCCEEEEEcccc--------cceEEee
Confidence 46788888653 3556666543321 11111110 011122222 3456666666443 3667777
Q ss_pred CCCcEEeC
Q 016877 198 ETKKWQDL 205 (381)
Q Consensus 198 ~~~~W~~~ 205 (381)
........
T Consensus 116 ~~~~~~~~ 123 (340)
T 4aow_A 116 TTGTTTRR 123 (340)
T ss_dssp TTTEEEEE
T ss_pred cccceeee
Confidence 76654443
No 181
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=83.70 E-value=38 Score=33.89 Aligned_cols=147 Identities=8% Similarity=0.010 Sum_probs=74.7
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCC--CceeEEe--eecccccccccCcceEeecCCCCCeEEccC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQK--GENIGVK--TKKDVVPKRILPATFQDLPAPELKWEKMKA 107 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~ 107 (381)
++.||+... +-+.+||+.+++ ..++...+.. -..+... +.+.... ...-+++|++.+++++....
T Consensus 141 ~g~lwi~t~-------~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt---~~~Gl~~~~~~~~~~~~~~~ 210 (795)
T 4a2l_A 141 PEQLLISTP-------EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGT---STDGLYTYSITQKTFEKVIP 210 (795)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEEEE---SSSCEEEEETTTCCEEECC-
T ss_pred CCCEEEEEC-------CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEEEE---CCCCEEEEeCCCCeEEEecC
Confidence 677887542 246788988777 4433211000 1111111 1122211 11257889998888877643
Q ss_pred CCCCCCCceEE-EECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCC---CCCc-cceEEEEEe-CCEEEEEcCCC
Q 016877 108 APVPRLDGAAI-QIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMP---REMA-HSHLGMVTD-GRYIYVVTGQY 181 (381)
Q Consensus 108 ~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~---~~~~-r~~~~~~~~-~~~iyv~GG~~ 181 (381)
.+....-.++. .-++.|+|..-. +-+++||+.+++++.....+ .... ..-.++... ++.|+|-..
T Consensus 211 ~~~~~~i~~i~~d~~g~lwigt~~-------~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-- 281 (795)
T 4a2l_A 211 ILGTKQIQAILQQSPTRIWVATEG-------AGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF-- 281 (795)
T ss_dssp ---CCCEEEEEEEETTEEEEEEBS-------SCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES--
T ss_pred CCCCCeeEEEEEcCCCCEEEEECC-------CCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC--
Confidence 22111111222 235677764311 23889999998887654321 1111 112233333 567776421
Q ss_pred CCCCCCCcceEEEEECCCCcEEeCC
Q 016877 182 GPQCRGPTAHTFVLDTETKKWQDLP 206 (381)
Q Consensus 182 ~~~~~~~~~~~~~yd~~~~~W~~~~ 206 (381)
.-+.+||+.+.+++...
T Consensus 282 --------~Gl~~~~~~~~~~~~~~ 298 (795)
T 4a2l_A 282 --------NDLNIYHEGTDSFASYS 298 (795)
T ss_dssp --------SCEEEEETTTTEEEEEC
T ss_pred --------ChhheEcCCCCeEEEEe
Confidence 13789999999998765
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=83.66 E-value=20 Score=30.65 Aligned_cols=169 Identities=9% Similarity=-0.087 Sum_probs=80.1
Q ss_pred CEEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEe--eecccccccccCcceEeecCCCC-CeEEccCC
Q 016877 34 DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPEL-KWEKMKAA 108 (381)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~W~~l~~~ 108 (381)
+.+++.|..++ .+..+|+++++ ..++.......+.+... +.+.. . ....+..+|+... .|+--.
T Consensus 5 ~~~lv~~~~~~-----~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s---~~~~V~~~d~~G~~~W~~~~-- 73 (276)
T 3no2_A 5 QHLLVGGSGWN-----KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-S---YSKGAKMITRDGRELWNIAA-- 73 (276)
T ss_dssp CEEEEECTTCS-----EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-E---CBSEEEEECTTSCEEEEEEC--
T ss_pred CcEEEeeCCCC-----EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-e---CCCCEEEECCCCCEEEEEcC--
Confidence 55666665443 67899998888 55555321122223222 11222 1 2346888898332 465432
Q ss_pred CCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCe-EecC--CCCCCCCccceEEEEEeCCEEEEEcCCCCCC
Q 016877 109 PVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGR--FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQ 184 (381)
Q Consensus 109 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~--~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~ 184 (381)
+.....+++..+ ++.+++....+ ...++.+|+..+. |+.- ...+.+...........++.+++....
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~---- 144 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA---- 144 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT----
T ss_pred CCCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC----
Confidence 111112333333 56666654321 1357788875442 4431 111111111112233445555554321
Q ss_pred CCCCcceEEEEECCC-CcEEeCCCCCCCCcccEEEE-ECCEEEEEccC
Q 016877 185 CRGPTAHTFVLDTET-KKWQDLPPLPVPRYAPATQL-WRGRLHVMGGS 230 (381)
Q Consensus 185 ~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~ 230 (381)
...+..||++- ..|+.-.+. ..+++.. .++.+++.+..
T Consensus 145 ----~~~v~~~d~~G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 145 ----TSEVREIAPNGQLLNSVKLSG----TPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp ----TTEEEEECTTSCEEEEEECSS----CCCEEEECTTSCEEEECBT
T ss_pred ----CCEEEEECCCCCEEEEEECCC----CccceeEcCCCCEEEEeCC
Confidence 35688999872 236553321 1123333 46778877653
No 183
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=83.28 E-value=34 Score=32.97 Aligned_cols=23 Identities=17% Similarity=-0.006 Sum_probs=16.4
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS 60 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (381)
++...+.|+.++ ++..||..+.+
T Consensus 250 dg~~l~s~s~D~-----~v~lWd~~~~~ 272 (611)
T 1nr0_A 250 DGTKIASASADK-----TIKIWNVATLK 272 (611)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTE
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCc
Confidence 556667776554 67889988776
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.89 E-value=25 Score=31.12 Aligned_cols=59 Identities=5% Similarity=-0.033 Sum_probs=31.0
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCC
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD 155 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~ 155 (381)
.++.+|..+.+..++...+..........-+++.+++...+ ..++++|+.+.+-+.+..
T Consensus 61 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~------~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 61 NYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE------LNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp EEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT------TEEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC------CcEEEEECCCCCcEEEEe
Confidence 56777877777666644222111112223345444344322 148899988776555543
No 185
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=82.85 E-value=8.8 Score=31.26 Aligned_cols=52 Identities=13% Similarity=0.235 Sum_probs=30.0
Q ss_pred EEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC--cEEe--C----CCCCCCCcccEEEEE--CCEEEEEcc
Q 016877 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK--KWQD--L----PPLPVPRYAPATQLW--RGRLHVMGG 229 (381)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~--~W~~--~----~~~p~~r~~~~~~~~--~~~lyv~GG 229 (381)
+++..++++|+|=| +.+|+++.... .... + +.+|.. --++... ++++|+|-|
T Consensus 11 Ai~~~~g~~yfFkg----------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~--IDAa~~~~~~~~~yfFkG 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKD----------GKYWRFSEGRGSRPQGPFLIADKWPALPRK--LDSVFEEPLSKKLFFFSG 72 (195)
T ss_dssp EEEEETTEEEEEET----------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS--CSEEEECTTTCCEEEEET
T ss_pred EEEEeCCEEEEEEC----------CEEEEEECCccccCCCcEEhhhccCCCCCC--ccEEEEECCCCeEEEEeC
Confidence 35567999999955 45788877652 2211 1 234432 2233332 678998876
No 186
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=82.70 E-value=19 Score=29.61 Aligned_cols=53 Identities=11% Similarity=0.115 Sum_probs=30.5
Q ss_pred EEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEe--C----CCCCCCCcccEEEEE--CCEEEEEccC
Q 016877 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQD--L----PPLPVPRYAPATQLW--RGRLHVMGGS 230 (381)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~--~----~~~p~~r~~~~~~~~--~~~lyv~GG~ 230 (381)
+++...+++|+|=| ..+|+++.....+.. + +.+|.. --++... ++++|+|-|.
T Consensus 28 Ai~~~~g~~y~Fkg----------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~--iDAa~~~~~~~~iyfFkG~ 88 (207)
T 1pex_A 28 AITSLRGETMIFKD----------RFFWRLHPQQVDAELFLTKSFWPELPNR--IDAAYEHPSHDLIFIFRGR 88 (207)
T ss_dssp EEEEETTEEEEEET----------TEEEEECSSSSCCEEEEHHHHCTTSCSS--CCEEEEETTTTEEEEEETT
T ss_pred EEEeCCCcEEEEEC----------CEEEEEeCCCcCCCceehhHhccCCCCC--ccEEEEeccCCcEEEEccC
Confidence 45567999999954 457788765533321 1 234422 2233333 5889998663
No 187
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=82.26 E-value=22 Score=30.00 Aligned_cols=118 Identities=10% Similarity=0.122 Sum_probs=60.5
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
..+.++|+. .+..... ++..........+ ++.+|+..... ..+.+||+. +++.... ++... .....+
T Consensus 41 ~~v~~~~~~-~~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~------~~v~~~d~~-g~~~~~~-~~~~~-~~~~~i 109 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFE-VPTPDAKVMCLIVSSLGDIWFTENGA------NKIGKLSKK-GGFTEYP-LPQPD-SGPYGI 109 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTT------TEEEEECTT-SCEEEEE-CSSTT-CCEEEE
T ss_pred CeEEEECCC-CceEEEE-CCCCCCcceeEEECCCCCEEEEecCC------CeEEEECCC-CCeEEec-CCCCC-CCCccc
Confidence 467788887 6655432 2222122222222 46788865321 348899988 6665432 22111 223444
Q ss_pred EEe-CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCC-CCcccEEEE-ECCEEEEEc
Q 016877 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPV-PRYAPATQL-WRGRLHVMG 228 (381)
Q Consensus 168 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~-~~~~lyv~G 228 (381)
+.. ++.+|+.... ...+++||+. .+..... ++. ...-..++. -++++|+..
T Consensus 110 ~~~~~g~l~v~~~~--------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 110 TEGLNGDIWFTQLN--------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp EECSTTCEEEEETT--------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred eECCCCCEEEEccC--------CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEe
Confidence 443 6788887421 2468899988 5554332 221 112223333 246688764
No 188
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=82.04 E-value=24 Score=30.36 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=31.2
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCC-CeEecCC--CCCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEE
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTD-NTWGGRF--DMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLD 196 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~--~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd 196 (381)
..+|+.+..+ ..+.+||+.+ .+...+. ....+.......++.. +..+|+.+.. ...+..||
T Consensus 141 ~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~--------~~~i~~~~ 206 (343)
T 1ri6_A 141 RTLWVPALKQ------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--------NSSVDVWE 206 (343)
T ss_dssp SEEEEEEGGG------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--------TTEEEEEE
T ss_pred CEEEEecCCC------CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC--------CCEEEEEE
Confidence 3677765322 3588899887 6554322 1111101111223332 3457776532 24577888
Q ss_pred CC
Q 016877 197 TE 198 (381)
Q Consensus 197 ~~ 198 (381)
..
T Consensus 207 ~~ 208 (343)
T 1ri6_A 207 LK 208 (343)
T ss_dssp SS
T ss_pred ec
Confidence 74
No 189
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=82.03 E-value=33 Score=32.29 Aligned_cols=62 Identities=6% Similarity=-0.031 Sum_probs=30.5
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
+++.++.|+.++ .+.+||.....-..+.....+ -.+++. .+++.++.|+.+ ..+..||...
T Consensus 355 ~g~~l~~~~~dg------~v~~~~~~~~~~~~~~~~~~~----v~~~~~s~dg~~l~~~~~d--------~~v~~~~~~~ 416 (577)
T 2ymu_A 355 DGQTIASASDDK------TVKLWNRNGQLLQTLTGHSSS----VRGVAFSPDGQTIASASDD--------KTVKLWNRNG 416 (577)
T ss_dssp TSSEEEEEETTS------EEEEEETTCCEEEEEECCSSC----EEEEEECTTSSCEEEEETT--------SEEEEECTTC
T ss_pred CCCEEEEEeCCC------EEEEEcCCCCEEEEecCCCCC----eEEEEECCCCCEEEEEeCC--------CEEEEEeCCC
Confidence 456667776542 466777655444433222211 112222 345556666543 3466777544
Q ss_pred C
Q 016877 200 K 200 (381)
Q Consensus 200 ~ 200 (381)
.
T Consensus 417 ~ 417 (577)
T 2ymu_A 417 Q 417 (577)
T ss_dssp C
T ss_pred C
Confidence 3
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=81.98 E-value=38 Score=32.60 Aligned_cols=94 Identities=9% Similarity=0.024 Sum_probs=47.8
Q ss_pred CcceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEE
Q 016877 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 166 (381)
+..+..+|..+.+-.. .++....-|.++.. +.++|+.+ .+ ..+.+||+.+.+-+.+..++.. .....
T Consensus 176 ~~~V~viD~~t~~v~~--~i~~g~~p~~v~~SpDGr~lyv~~-~d------g~V~viD~~~~t~~~v~~i~~G--~~P~~ 244 (567)
T 1qks_A 176 AGQIALIDGSTYEIKT--VLDTGYAVHISRLSASGRYLFVIG-RD------GKVNMIDLWMKEPTTVAEIKIG--SEARS 244 (567)
T ss_dssp TTEEEEEETTTCCEEE--EEECSSCEEEEEECTTSCEEEEEE-TT------SEEEEEETTSSSCCEEEEEECC--SEEEE
T ss_pred CCeEEEEECCCCeEEE--EEeCCCCccceEECCCCCEEEEEc-CC------CeEEEEECCCCCCcEeEEEecC--CCCce
Confidence 3467788888775432 22333232344333 34788764 21 3589999852222222233321 11223
Q ss_pred EEEe------CCEEEEEcCCCCCCCCCCcceEEEEECCCCc
Q 016877 167 MVTD------GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 167 ~~~~------~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
+++. +..+|+..- ..+.+.++|..+.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~--------~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAY--------WPPQYVIMDGETLE 277 (567)
T ss_dssp EEECCSTTCTTTEEEEEEE--------ETTEEEEEETTTCC
T ss_pred eEEccccCCCCCEEEEEEc--------cCCeEEEEECCCCc
Confidence 4443 446777632 13567788987754
No 191
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=81.27 E-value=40 Score=32.42 Aligned_cols=79 Identities=8% Similarity=0.039 Sum_probs=44.5
Q ss_pred EEEECCEEEEEecCCCCCCcccceEEEeCCCC--eEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEE
Q 016877 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDN--TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFV 194 (381)
Q Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 194 (381)
.++.+++||+... ...+.++|.++. .|+.-..-+........+-++.++.+|+-.+..... ....++.
T Consensus 111 ~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~---~~g~v~a 180 (571)
T 2ad6_A 111 LAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG---VRGAVNA 180 (571)
T ss_dssp CEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT---CCCEEEE
T ss_pred cEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccC---CCCEEEE
Confidence 4556889988643 135899999877 487532111000011223345688888754321111 1356899
Q ss_pred EECCCCc--EEeC
Q 016877 195 LDTETKK--WQDL 205 (381)
Q Consensus 195 yd~~~~~--W~~~ 205 (381)
||+++.+ |+.-
T Consensus 181 ~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 181 FDLKTGELKWRAF 193 (571)
T ss_dssp EETTTCCEEEEEE
T ss_pred EECCCCcEEEEEc
Confidence 9998654 8653
No 192
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=81.11 E-value=44 Score=32.86 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=45.6
Q ss_pred EEEECCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCC-CCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEE
Q 016877 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFD-MPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTF 193 (381)
Q Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~-~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 193 (381)
.++.+++||+... ...+.++|.++.+ |+.-.. -+........+.++.++.+|+-.+.... .....++
T Consensus 124 ~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~---~~~g~v~ 193 (677)
T 1kb0_A 124 VALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY---GVRGYIT 193 (677)
T ss_dssp CEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT---CCBCEEE
T ss_pred ceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccccc---CCCCEEE
Confidence 4556888888642 1358999998764 876422 1110011222345578888875432111 1246799
Q ss_pred EEECCCCc--EEeC
Q 016877 194 VLDTETKK--WQDL 205 (381)
Q Consensus 194 ~yd~~~~~--W~~~ 205 (381)
.||.++.+ |+.-
T Consensus 194 a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 194 AYDAETGERKWRWF 207 (677)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCcEEEEec
Confidence 99998765 8653
No 193
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=80.99 E-value=14 Score=33.21 Aligned_cols=93 Identities=10% Similarity=-0.039 Sum_probs=47.7
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
..+..+|..+.+-... +........++.+ ++..++.|+.+ ..+.++|+.+.+....-.... .-.++
T Consensus 145 ~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~~~~----~v~~~ 212 (393)
T 1erj_A 145 RLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRTGQCSLTLSIED----GVTTV 212 (393)
T ss_dssp SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECSS----CEEEE
T ss_pred CeEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCC------CcEEEEECCCCeeEEEEEcCC----CcEEE
Confidence 3566777766543221 1111111122222 45556666654 357888988876543222221 12233
Q ss_pred EEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCCcE
Q 016877 168 VTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (381)
Q Consensus 168 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (381)
+.. ++++++.|+.++ .+..||..+..-
T Consensus 213 ~~~~~~~~~l~~~s~d~--------~v~iwd~~~~~~ 241 (393)
T 1erj_A 213 AVSPGDGKYIAAGSLDR--------AVRVWDSETGFL 241 (393)
T ss_dssp EECSTTCCEEEEEETTS--------CEEEEETTTCCE
T ss_pred EEECCCCCEEEEEcCCC--------cEEEEECCCCcE
Confidence 332 567777776544 377888887653
No 194
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=80.48 E-value=47 Score=32.76 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=56.9
Q ss_pred EEEECCEEEEEecCCCCCCcccceEEEeCCCC--eEecCCCCCCCCc------cceEEEEEeCCEEEEEcCCCCCCCCCC
Q 016877 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDN--TWGGRFDMPREMA------HSHLGMVTDGRYIYVVTGQYGPQCRGP 188 (381)
Q Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 188 (381)
-++.++.||+.... ..++++|.++. .|+.-...+.... ....+.++.+++||+...
T Consensus 66 P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--------- 129 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--------- 129 (689)
T ss_dssp CEEETTEEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---------
T ss_pred CEEECCEEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---------
Confidence 35679999997642 35899998876 4887443321000 012235668899887642
Q ss_pred cceEEEEECCCCc--EEeCCC-CCC--CCcccEEEEECCEEEEEc
Q 016877 189 TAHTFVLDTETKK--WQDLPP-LPV--PRYAPATQLWRGRLHVMG 228 (381)
Q Consensus 189 ~~~~~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~lyv~G 228 (381)
...++.+|.+|.+ |+.-.. -+. .....+-++.++.+|+-.
T Consensus 130 dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~ 174 (689)
T 1yiq_A 130 DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGN 174 (689)
T ss_dssp TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECC
T ss_pred CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEe
Confidence 2458899988764 876432 111 122223456788888743
No 195
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=80.14 E-value=44 Score=32.26 Aligned_cols=129 Identities=12% Similarity=0.045 Sum_probs=65.0
Q ss_pred ceEeecCCC------CCeEEcc-CCCCCCCCceEEEECCEEEEEecCCCCCC--cccceEEEeCC-CC---eEecCCCCC
Q 016877 91 TFQDLPAPE------LKWEKMK-AAPVPRLDGAAIQIKNLLYVFAGYGSIDY--VHSHVDIYNFT-DN---TWGGRFDMP 157 (381)
Q Consensus 91 ~~~~~~~~~------~~W~~l~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--~~~~~~~yd~~-~~---~W~~~~~~~ 157 (381)
.++.+|..+ .+.+.+. .-+. ........-+++.+++...+.... ...+++++|.. +. +.+.+..-.
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred EEEEEECCCCccccCCceeEEEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 566777766 5555544 2111 111112233554444444332211 12469999998 56 444443211
Q ss_pred CCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCC----c---ccEEEEE-CCEEEEEc
Q 016877 158 REMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPR----Y---APATQLW-RGRLHVMG 228 (381)
Q Consensus 158 ~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~---~~~~~~~-~~~lyv~G 228 (381)
. ......+. -++++|+.+..++ ...++++|+++.+++.+.+..... . ....+.. ++++++.+
T Consensus 241 ~---~~~~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 241 E---EAIAQAEWAPDGSLIVATDRTG------WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp T---BCEEEEEECTTSCEEEEECTTS------SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred C---ceEcceEECCCCeEEEEECCCC------CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 1 12223333 3667777765433 347999999898898875432111 0 1123333 66777665
Q ss_pred c
Q 016877 229 G 229 (381)
Q Consensus 229 G 229 (381)
.
T Consensus 312 ~ 312 (662)
T 3azo_A 312 G 312 (662)
T ss_dssp B
T ss_pred E
Confidence 4
No 196
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=80.09 E-value=30 Score=30.24 Aligned_cols=59 Identities=10% Similarity=0.079 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEe-CCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQD-LPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
++.+.+.|+.+ ..+..+|..+.+-.. +.. ....-.+++. -+++.++.|+.++ .+..|++
T Consensus 87 ~~~~l~s~s~D--------~~v~lwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~ 147 (343)
T 2xzm_R 87 ENCFAISSSWD--------KTLRLWDLRTGTTYKRFVG--HQSEVYSVAFSPDNRQILSAGAER-----EIKLWNI 147 (343)
T ss_dssp STTEEEEEETT--------SEEEEEETTSSCEEEEEEC--CCSCEEEEEECSSTTEEEEEETTS-----CEEEEES
T ss_pred CCCEEEEEcCC--------CcEEEEECCCCcEEEEEcC--CCCcEEEEEECCCCCEEEEEcCCC-----EEEEEec
Confidence 44556666543 347788888765322 111 1111122222 2455666666543 4556653
No 197
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=79.58 E-value=49 Score=32.48 Aligned_cols=86 Identities=13% Similarity=0.064 Sum_probs=49.9
Q ss_pred ccceEEEeCCC------C--eEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC---cEEeC
Q 016877 137 HSHVDIYNFTD------N--TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK---KWQDL 205 (381)
Q Consensus 137 ~~~~~~yd~~~------~--~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~---~W~~~ 205 (381)
.++++++|..+ . .+..+..-... ........++.||+.+..+. ....++.+|+.+. .|+.+
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~s~~~~-----~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEG---EYDYVTNEGTVFTFKTNRHS-----PNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSS---CEEEEEEETTEEEEEECTTC-----TTCEEEEEETTSCCGGGCEEE
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCc---EEEEEeccCCEEEEEECCCC-----CCCEEEEEeCCCCCcccceec
Confidence 35699999876 3 57766433221 12234456788888875432 1357999998875 48776
Q ss_pred CCCCCCCcccEEEEE-CCEEEEEccC
Q 016877 206 PPLPVPRYAPATQLW-RGRLHVMGGS 230 (381)
Q Consensus 206 ~~~p~~r~~~~~~~~-~~~lyv~GG~ 230 (381)
-+-........+... ++++++....
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 432221222334445 6777776543
No 198
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=79.44 E-value=30 Score=29.85 Aligned_cols=152 Identities=9% Similarity=0.077 Sum_probs=76.6
Q ss_pred hhhee-EcCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--eecccccccccCcceEeecCCCCCe
Q 016877 27 LGFAL-VADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPELKW 102 (381)
Q Consensus 27 ~~~~~-~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W 102 (381)
++.++ -++.||+.-..+ +.+.++|+.... ..+... ....+++.. +..+......-...+..+++.+.+.
T Consensus 35 egia~~~~g~lyv~d~~~-----~~I~~~d~~g~~~~~~~~~--~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHEV-----GEIVSITPDGNQQIHATVE--GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp EEEEECTTSCEEEEETTT-----TEEEEECTTCCEEEEEECS--SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred ceEEECCCCCEEEEeCCC-----CeEEEECCCCceEEEEeCC--CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 44444 267788886422 367899987755 322221 122233322 1122221111111377788878777
Q ss_pred EEccCCCCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCe---EecCCC----CCCCCccceEEEEEeCCEE
Q 016877 103 EKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNT---WGGRFD----MPREMAHSHLGMVTDGRYI 174 (381)
Q Consensus 103 ~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~---W~~~~~----~~~~~~r~~~~~~~~~~~i 174 (381)
+.+...+..+.....+.. ++.+|+.--. ...++++|+.+.+ |..-.. .+.........+...++.+
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~l 181 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSY------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFL 181 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETT------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECC------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEE
Confidence 776665554443344333 4567775321 2368999987642 311110 1110011223344456789
Q ss_pred EEEcCCCCCCCCCCcceEEEEECCC
Q 016877 175 YVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
|+.-- ..+.+++||+..
T Consensus 182 yv~d~--------~~~~I~~~~~~~ 198 (306)
T 2p4o_A 182 YVSNT--------EKMLLLRIPVDS 198 (306)
T ss_dssp EEEET--------TTTEEEEEEBCT
T ss_pred EEEeC--------CCCEEEEEEeCC
Confidence 98732 146799999875
No 199
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=79.01 E-value=21 Score=34.96 Aligned_cols=23 Identities=9% Similarity=-0.061 Sum_probs=15.3
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECCCCc
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
++++.+.|+.++ .+.++|..+.+
T Consensus 441 ~g~~l~sgs~Dg--------~v~vwd~~~~~ 463 (694)
T 3dm0_A 441 DGQFALSGSWDG--------ELRLWDLAAGV 463 (694)
T ss_dssp TSSEEEEEETTS--------EEEEEETTTTE
T ss_pred CCCEEEEEeCCC--------cEEEEECCCCc
Confidence 556667776543 47788887764
No 200
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=78.22 E-value=56 Score=32.31 Aligned_cols=113 Identities=15% Similarity=0.072 Sum_probs=54.7
Q ss_pred eEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCC----CeEecCC--CCCCCCccc
Q 016877 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTD----NTWGGRF--DMPREMAHS 163 (381)
Q Consensus 92 ~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~~--~~~~~~~r~ 163 (381)
+..++..+.....+.+ ..+.-++++.. ++.||+.--. ...+.++++.. ..-..+. .+..|
T Consensus 388 I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~~------~~~I~~~~~~g~~~~~~~~~~i~~~~~~P---- 455 (699)
T 1n7d_A 388 VRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQAP---- 455 (699)
T ss_dssp -CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCTT------TTSBEEEESCCCCC-CCCCCBCCSCC--C----
T ss_pred eEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEecC------CCeEEEEecCCCCCCcceEEEEeCCCCCc----
Confidence 4455665555544322 12222333333 5688886321 23588888875 1111111 12222
Q ss_pred eEEEEE--eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC--CCCCCCcccEEEE--ECCEEEEEc
Q 016877 164 HLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (381)
Q Consensus 164 ~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~lyv~G 228 (381)
.++++ .++.||+.-. ....++++|+....-+.+. .+..|+ .+++ .++.||+.-
T Consensus 456 -~glavD~~~g~LY~tD~--------~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td 514 (699)
T 1n7d_A 456 -DGLAVDWIHSNIYWTDS--------VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTD 514 (699)
T ss_dssp -CCEECCCSSSBCEECCT--------TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECC
T ss_pred -ceEEEEeeCCcEEEEec--------cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcc
Confidence 23443 4678998631 1355889998876544432 223332 2233 356777763
No 201
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=78.01 E-value=29 Score=29.01 Aligned_cols=176 Identities=9% Similarity=-0.020 Sum_probs=89.0
Q ss_pred hhheeE--cCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--e-ecccccccccCcceEeecCCCC
Q 016877 27 LGFALV--ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--T-KKDVVPKRILPATFQDLPAPEL 100 (381)
Q Consensus 27 ~~~~~~--~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 100 (381)
|++++- ++.||+.-..+ +.+.++|+.... ..+.........+++.. . .++... .....+.+++....
T Consensus 39 ~gi~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d--~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDISE-----PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD--SQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEETTTTEEEEEETTT-----TEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSC
T ss_pred EEEEEecCCCEEEEEECCC-----CEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEE--CCCCEEEEEEcCCC
Confidence 566664 57899886532 478889987765 32222111122334332 1 133222 22346777776554
Q ss_pred CeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe--CCEEEE
Q 016877 101 KWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYV 176 (381)
Q Consensus 101 ~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv 176 (381)
.-+.+.+....+. ..++.. +++||+.-.... ...++++++....-+.+..... ....++++. +++||+
T Consensus 112 ~~~~~~~~~~~~P-~~i~vd~~~g~lyv~~~~~~----~~~I~~~~~dg~~~~~~~~~~~---~~P~gia~d~~~~~lyv 183 (267)
T 1npe_A 112 QRRVLFDTGLVNP-RGIVTDPVRGNLYWTDWNRD----NPKIETSHMDGTNRRILAQDNL---GLPNGLTFDAFSSQLCW 183 (267)
T ss_dssp SCEEEECSSCSSE-EEEEEETTTTEEEEEECCSS----SCEEEEEETTSCCCEEEECTTC---SCEEEEEEETTTTEEEE
T ss_pred CEEEEEECCCCCc-cEEEEeeCCCEEEEEECCCC----CcEEEEEecCCCCcEEEEECCC---CCCcEEEEcCCCCEEEE
Confidence 3333322111111 223333 579998753211 2357888876543332221111 223345553 578998
Q ss_pred EcCCCCCCCCCCcceEEEEECCCCcEEeC-CCCCCCCcccEEEEECCEEEEEc
Q 016877 177 VTGQYGPQCRGPTAHTFVLDTETKKWQDL-PPLPVPRYAPATQLWRGRLHVMG 228 (381)
Q Consensus 177 ~GG~~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~lyv~G 228 (381)
.-. ..+.++++|+....-..+ ..+..| ..+++.++.||+.-
T Consensus 184 ~d~--------~~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~ 225 (267)
T 1npe_A 184 VDA--------GTHRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTD 225 (267)
T ss_dssp EET--------TTTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEE
T ss_pred EEC--------CCCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEE
Confidence 742 146799999976432222 222222 35556688999974
No 202
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=77.03 E-value=57 Score=31.78 Aligned_cols=111 Identities=9% Similarity=-0.013 Sum_probs=55.5
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCC-eEecCCCCCCCCcc-ceE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDN-TWGGRFDMPREMAH-SHL 165 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r-~~~ 165 (381)
..++.+|..+.+-..+............+.+ +++.++++..+.... ...++.+|+.+. ....+.....+... ...
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~-~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQN-ECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSC-EEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCC-eeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 3577788877665444322111112222222 454444443332222 346999999988 66654311110000 001
Q ss_pred EEEE-e--CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC
Q 016877 166 GMVT-D--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (381)
Q Consensus 166 ~~~~-~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (381)
.++. - ++++++.+..++ ...+|.+|......+.+..
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g------~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDG------WNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp CCEECTTCSSEEEEEECTTS------SCEEEEEETTSCEEEECCC
T ss_pred CceeecCCCCEEEEEEccCC------ccEEEEEECCCCEEEecCC
Confidence 1222 3 677666654433 4678999987777777643
No 203
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=76.60 E-value=13 Score=34.07 Aligned_cols=20 Identities=15% Similarity=0.227 Sum_probs=12.8
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCC
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTD 147 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~ 147 (381)
+.+++.|+.++ .+.+||..+
T Consensus 141 ~~~lat~~~dg------~V~vwd~~~ 160 (430)
T 2xyi_A 141 ACVIATKTPSS------DVLVFDYTK 160 (430)
T ss_dssp EEEEEEECSSS------CEEEEEGGG
T ss_pred CcEEEEECCCC------cEEEEECCC
Confidence 46777776542 477777764
No 204
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=76.11 E-value=39 Score=29.42 Aligned_cols=66 Identities=9% Similarity=-0.009 Sum_probs=41.5
Q ss_pred CEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCc
Q 016877 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 122 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
+.+|+++-.. ..+++||+.+++..... .+. .-......-++++|+... ..+++||+++.+
T Consensus 61 ~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~---~v~~i~~~~dg~l~v~~~----------~gl~~~d~~~g~ 120 (326)
T 2ghs_A 61 GTAWWFNILE------RELHELHLASGRKTVHA-LPF---MGSALAKISDSKQLIASD----------DGLFLRDTATGV 120 (326)
T ss_dssp TEEEEEEGGG------TEEEEEETTTTEEEEEE-CSS---CEEEEEEEETTEEEEEET----------TEEEEEETTTCC
T ss_pred CEEEEEECCC------CEEEEEECCCCcEEEEE-CCC---cceEEEEeCCCeEEEEEC----------CCEEEEECCCCc
Confidence 5788876432 35899999988765442 222 112222335788887631 348999999988
Q ss_pred EEeCCC
Q 016877 202 WQDLPP 207 (381)
Q Consensus 202 W~~~~~ 207 (381)
.+.+..
T Consensus 121 ~~~~~~ 126 (326)
T 2ghs_A 121 LTLHAE 126 (326)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 876643
No 205
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=76.10 E-value=30 Score=32.92 Aligned_cols=98 Identities=11% Similarity=-0.055 Sum_probs=54.3
Q ss_pred EeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eC
Q 016877 93 QDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DG 171 (381)
Q Consensus 93 ~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~ 171 (381)
..||..+.+-+++...+. ...+..-+++.++++..+..+. ..++++|+.+.+++.+...+. . ....+. -+
T Consensus 135 ~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~--~~i~~~d~~~g~~~~l~~~~~---~-~~~~~~SpD 205 (582)
T 3o4h_A 135 ALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGR--VSLFTSNLSSGGLRVFDSGEG---S-FSSASISPG 205 (582)
T ss_dssp EEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTE--EEEEEEETTTCCCEEECCSSC---E-EEEEEECTT
T ss_pred eEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCC--eEEEEEcCCCCCceEeecCCC---c-cccceECCC
Confidence 356766666555543332 2223344666666555443221 359999999998887754332 1 122232 24
Q ss_pred CEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeC
Q 016877 172 RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL 205 (381)
Q Consensus 172 ~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~ 205 (381)
++.++.+..++ ...++++|+++.+.+.+
T Consensus 206 G~~l~~~~~~~------~~~i~~~d~~~~~~~~~ 233 (582)
T 3o4h_A 206 MKVTAGLETAR------EARLVTVDPRDGSVEDL 233 (582)
T ss_dssp SCEEEEEECSS------CEEEEEECTTTCCEEEC
T ss_pred CCEEEEccCCC------eeEEEEEcCCCCcEEEc
Confidence 44333332222 35799999999887743
No 206
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=75.78 E-value=58 Score=31.26 Aligned_cols=178 Identities=12% Similarity=0.132 Sum_probs=84.0
Q ss_pred HhhheeE--cCEEEEecCCCCCcccceeeeeeCC--Cce--eeecC-CCCCCCceeEEe-----eecccccccccCcceE
Q 016877 26 ILGFALV--ADFFWASSSKFTSSYLNIASNWSPY--HNS--IILPN-NGPQKGENIGVK-----TKKDVVPKRILPATFQ 93 (381)
Q Consensus 26 ~~~~~~~--~~~ly~~GG~~~~~~~~~~~~~d~~--~~~--~~~p~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 93 (381)
.|++++- +.++|+.+. + +.+..||+. +.+ ..++. ..|+ ++... .+.+..-....+..+.
T Consensus 199 p~~v~~SpDGr~lyv~~~-d-----g~V~viD~~~~t~~~v~~i~~G~~P~---~ia~s~~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGR-D-----GKVNMIDLWMKEPTTVAEIKIGSEAR---SIETSKMEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp EEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCCEEEEEECCSEEE---EEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred ccceEECCCCCEEEEEcC-C-----CeEEEEECCCCCCcEeEEEecCCCCc---eeEEccccCCCCCEEEEEEccCCeEE
Confidence 3555544 457887642 2 368999995 555 44443 2221 22222 1222222233455677
Q ss_pred eecCCCCCeEEccCC-----------CCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCcc
Q 016877 94 DLPAPELKWEKMKAA-----------PVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAH 162 (381)
Q Consensus 94 ~~~~~~~~W~~l~~~-----------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r 162 (381)
.+|..+.+=.+.-++ |.+|.....+..++..+++--. -...++..|........+..++. .+
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~-----~~g~v~~vd~~~~~~~~v~~i~~--~~ 342 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK-----ETGKILLVDYTDLNNLKTTEISA--ER 342 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET-----TTTEEEEEETTCSSEEEEEEEEC--CS
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec-----CCCeEEEEecCCCccceeeeeec--cc
Confidence 888766543221111 1223222222223323332211 12457888877665444433333 23
Q ss_pred ceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEE---eC-CCCCCCCcccEEEEE--CCEEEEEc
Q 016877 163 SHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQ---DL-PPLPVPRYAPATQLW--RGRLHVMG 228 (381)
Q Consensus 163 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~---~~-~~~p~~r~~~~~~~~--~~~lyv~G 228 (381)
..|..... +.++|+... ..+.+.++|.++.+-. .+ ...|.+..+... .. .+.+|+..
T Consensus 343 ~~~d~~~~pdgr~~~va~~--------~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~ 407 (567)
T 1qks_A 343 FLHDGGLDGSHRYFITAAN--------ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATS 407 (567)
T ss_dssp SEEEEEECTTSCEEEEEEG--------GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEE
T ss_pred cccCceECCCCCEEEEEeC--------CCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeC
Confidence 44444432 345555432 2577999999988643 23 334544333332 33 25677664
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=75.39 E-value=38 Score=28.93 Aligned_cols=99 Identities=5% Similarity=-0.090 Sum_probs=50.8
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCC--CCccceEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR--EMAHSHLG 166 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~ 166 (381)
..++++|+.+.+-.... .+. + -.+++.. ++++++.. .+.+.+||+++++++.+...+. +..+....
T Consensus 35 ~~i~~~d~~~~~~~~~~-~~~-~-~~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di 103 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVT-MDA-P-VSSVALRQSGGYVATI--------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDG 103 (297)
T ss_dssp TEEEEEETTTCCEEEEE-CSS-C-EEEEEEBTTSSEEEEE--------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEE
T ss_pred CEEEEEECCCCcEEEEe-CCC-c-eEEEEECCCCCEEEEE--------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCE
Confidence 46778888776543322 111 1 1122222 55666643 1358999999998887654322 22233333
Q ss_pred EEEeCCEEEEEcCCCCCC---CCCCcceEEEEECCC
Q 016877 167 MVTDGRYIYVVTGQYGPQ---CRGPTAHTFVLDTET 199 (381)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~---~~~~~~~~~~yd~~~ 199 (381)
.+.-++.||+-.-..... .......++++|+..
T Consensus 104 ~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 104 KVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp EECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred EECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 333467788742111100 001245789999864
No 208
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=75.23 E-value=36 Score=28.59 Aligned_cols=179 Identities=8% Similarity=-0.001 Sum_probs=85.4
Q ss_pred hhhee--EcCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--eecccccccccCcceEeecCCCCC
Q 016877 27 LGFAL--VADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPELK 101 (381)
Q Consensus 27 ~~~~~--~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 101 (381)
+++++ -++.||+..... .+.+..||+.... ..+.........+++.. +..+... .....+..||+....
T Consensus 80 ~~i~~~~~~g~l~v~~~~~----~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~--~~~~~i~~~~~~g~~ 153 (286)
T 1q7f_A 80 NRVAVVRNSGDIIVTERSP----THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVE--CKVMRVIIFDQNGNV 153 (286)
T ss_dssp EEEEEETTTTEEEEEECGG----GCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEE--TTTTEEEEECTTSCE
T ss_pred eEEEEEcCCCeEEEEcCCC----CCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEE--CCCCEEEEEcCCCCE
Confidence 34555 368899886421 2367888854443 33332111112233221 1122221 123467788876543
Q ss_pred eEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEc
Q 016877 102 WEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVT 178 (381)
Q Consensus 102 W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~G 178 (381)
...+... ..........+ ++.+||.... ...+.+||+..+....+..-.. .....+++. -++++|+..
T Consensus 154 ~~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~g~--~~~p~~i~~d~~G~l~v~~ 224 (286)
T 1q7f_A 154 LHKFGCS-KHLEFPNGVVVNDKQEIFISDNR------AHCVKVFNYEGQYLRQIGGEGI--TNYPIGVGINSNGEILIAD 224 (286)
T ss_dssp EEEEECT-TTCSSEEEEEECSSSEEEEEEGG------GTEEEEEETTCCEEEEESCTTT--SCSEEEEEECTTCCEEEEE
T ss_pred EEEeCCC-CccCCcEEEEECCCCCEEEEECC------CCEEEEEcCCCCEEEEEccCCc--cCCCcEEEECCCCCEEEEe
Confidence 3333211 11111222222 4688887643 2458899987665444432110 012234444 356888875
Q ss_pred CCCCCCCCCCcceEEEEECCCCcEEeCCC-CCCCCcccEEEE-ECCEEEEEc
Q 016877 179 GQYGPQCRGPTAHTFVLDTETKKWQDLPP-LPVPRYAPATQL-WRGRLHVMG 228 (381)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~lyv~G 228 (381)
..++ ..+.+||+....-..+.. .+.. .-.++++ -++++|+..
T Consensus 225 ~~~~-------~~i~~~~~~g~~~~~~~~~~~~~-~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 225 NHNN-------FNLTIFTQDGQLISALESKVKHA-QCFDVALMDDGSVVLAS 268 (286)
T ss_dssp CSSS-------CEEEEECTTSCEEEEEEESSCCS-CEEEEEEETTTEEEEEE
T ss_pred CCCC-------EEEEEECCCCCEEEEEcccCCCC-cceeEEECCCCcEEEEC
Confidence 3211 268899987554333321 1111 1123333 367888883
No 209
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=74.46 E-value=42 Score=29.01 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=43.4
Q ss_pred eEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCC--CCccceEEEEEe--CCEEEEEcCCCCCCC----
Q 016877 116 AAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR--EMAHSHLGMVTD--GRYIYVVTGQYGPQC---- 185 (381)
Q Consensus 116 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~~~~~--~~~iyv~GG~~~~~~---- 185 (381)
+++.. ++.|||.-.. ..+.++|+.+++.+.+..... +. .....+++. ++.||+.-.......
T Consensus 84 gi~~~~~~g~l~v~d~~-------~~i~~~d~~~g~~~~~~~~~~~~~~-~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 84 DISYNLQNNQLYIVDCY-------YHLSVVGSEGGHATQLATSVDGVPF-KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp EEEEETTTTEEEEEETT-------TEEEEECTTCEECEEEESEETTEEC-SCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred eEEEcCCCCcEEEEECC-------CCEEEEeCCCCEEEEecccCCCCcc-cccceEEEecCCCEEEEECCcccccccccc
Confidence 34444 5789987432 237888988766555432211 11 122334443 578998642110000
Q ss_pred -----CCCcceEEEEECCCCcEEeC
Q 016877 186 -----RGPTAHTFVLDTETKKWQDL 205 (381)
Q Consensus 186 -----~~~~~~~~~yd~~~~~W~~~ 205 (381)
......+++||+.+.+.+.+
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred eehcccCCCceEEEEeCCCCEEEEe
Confidence 01136799999988776543
No 210
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=73.95 E-value=26 Score=30.27 Aligned_cols=59 Identities=7% Similarity=0.085 Sum_probs=29.4
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEe-CCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQD-LPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
++...+.|+.+ ..+..||..+.+-.. +.. ....-.++.. -++.+++.|+.++ .+..|++
T Consensus 76 dg~~l~s~s~D--------~~v~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~ 136 (319)
T 3frx_A 76 DGAYALSASWD--------KTLRLWDVATGETYQRFVG--HKSDVMSVDIDKKASMIISGSRDK-----TIKVWTI 136 (319)
T ss_dssp TSSEEEEEETT--------SEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSCEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeCC--------CEEEEEECCCCCeeEEEcc--CCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEEC
Confidence 45566666644 347788988765321 111 1111112222 2456777776543 4556653
No 211
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=73.12 E-value=50 Score=29.25 Aligned_cols=81 Identities=9% Similarity=-0.112 Sum_probs=40.2
Q ss_pred ceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCC--CCCccc
Q 016877 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP--VPRYAP 215 (381)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~ 215 (381)
.+.++|+++.+-........+ -.+++. -++++++.++. +.+.+++..+..-....... ......
T Consensus 158 ~i~iwd~~~~~~~~~~~~~~~----V~~v~fspdg~~l~s~s~---------~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETRGE----VKDLHFSTDGKVVAYITG---------SSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp EEEEEETTTTEEEEEEECSSC----CCEEEECTTSSEEEEECS---------SCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EEEEeECCCCcEEEEeCCCCc----eEEEEEccCCceEEeccc---------eeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 477889988765443222211 123333 35566666542 33667777766543322111 111112
Q ss_pred EEEEECCEEEEEccCCC
Q 016877 216 ATQLWRGRLHVMGGSGE 232 (381)
Q Consensus 216 ~~~~~~~~lyv~GG~~~ 232 (381)
.+..-+++.++.++.+.
T Consensus 225 v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 225 INFIADDTVLIAASLKK 241 (365)
T ss_dssp EEEEETTEEEEEEEESS
T ss_pred EEEcCCCCEEEEEecCC
Confidence 22345788888776543
No 212
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=72.35 E-value=39 Score=28.96 Aligned_cols=71 Identities=17% Similarity=0.226 Sum_probs=35.4
Q ss_pred eEEEeCCCC-eEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECC-CCcEEeCCCCCCCCcccEE
Q 016877 140 VDIYNFTDN-TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE-TKKWQDLPPLPVPRYAPAT 217 (381)
Q Consensus 140 ~~~yd~~~~-~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~ 217 (381)
+.+||+..+ .|+... +.. .....+..++.||+... ...+++||++ ...|+...+.+. ..+.
T Consensus 80 l~~~d~~g~~~~~~~~--~~~---~~~~~~~~~~~l~v~t~---------~~~l~~~d~~g~~~~~~~~~~~~---~~~~ 142 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDT--KKA---IVSDFTIFEDILYVTSM---------DGHLYAINTDGTEKWRFKTKKAI---YATP 142 (330)
T ss_dssp EEEECCCGGGGGGSCC----------CCEEEETTEEEEECT---------TSEEEEECTTSCEEEEEECSSCC---CSCC
T ss_pred EEEECCCCcEEEEEEC--CCC---cccCceEECCEEEEEec---------CCEEEEEcCCCCEEEEEcCCCce---eeee
Confidence 888987433 354321 111 11123334888887532 2458899987 445765432221 1222
Q ss_pred EEE-CCEEEEE
Q 016877 218 QLW-RGRLHVM 227 (381)
Q Consensus 218 ~~~-~~~lyv~ 227 (381)
+.. ++.||+.
T Consensus 143 ~~~~~g~l~vg 153 (330)
T 3hxj_A 143 IVSEDGTIYVG 153 (330)
T ss_dssp EECTTSCEEEE
T ss_pred EEcCCCEEEEE
Confidence 333 5667764
No 213
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=72.09 E-value=85 Score=31.50 Aligned_cols=200 Identities=11% Similarity=0.087 Sum_probs=94.9
Q ss_pred ceEeecCCCCCeEEccCCCC-----CCCCceEEEEC---CEEEEEecCCCCCCcccceEEEeCCCCeEecCCC-CCCC--
Q 016877 91 TFQDLPAPELKWEKMKAAPV-----PRLDGAAIQIK---NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD-MPRE-- 159 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~-----~r~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~-- 159 (381)
.+++-+-...+|+++...+. .+.-.+++... +.+|+..|....... ..+++=+-.-.+|+++.. ++.+
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~-~~v~~S~DgG~TW~~~~~~~~~~~~ 116 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW-AAFYVSEDRGQSFTIYESPFPMGAN 116 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC-CEEEEESSTTSEEEEEECSSCCCTT
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc-cEEEEECCCCCcceeccCCcccCcc
Confidence 35555556678999865321 12223333332 468887664221111 234444444568998742 1110
Q ss_pred -Ccc-ceEEEEEe---CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCC---CCcccEEEEE----CCEEEEE
Q 016877 160 -MAH-SHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPV---PRYAPATQLW----RGRLHVM 227 (381)
Q Consensus 160 -~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~~----~~~lyv~ 227 (381)
..| ....+++. .+.+|+. ... ..+++=+-.-.+|+++..+|. .-.......+ .+.||+.
T Consensus 117 ~~~~~~~~~iav~p~~~~~v~~g-~~~--------~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 187 (789)
T 1sqj_A 117 DMGRNNGERLAVNPFNSNEVWMG-TRT--------EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYAS 187 (789)
T ss_dssp STTTTSCCCEEEETTEEEEEEEE-CSS--------SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEE
T ss_pred CCCccceeEEEEcCCCCCEEEEE-ecc--------CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEE
Confidence 012 12234443 3567763 211 225544444578999876441 1122222332 2467776
Q ss_pred ccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCC-------c---------ceeEEEe--CCEEEEEccCCCCCC
Q 016877 228 GGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG-------P---------HRACVVV--DDRLLVIGGQEGDFM 289 (381)
Q Consensus 228 GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~-------~---------~~~~~~~--~~~l~v~GG~~~~~~ 289 (381)
.... ...|.- ...-.+|+.+..+|... . .+.++.. .+.||+..+.....
T Consensus 188 ~~~~-------~~v~~S-----~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p- 254 (789)
T 1sqj_A 188 ATAP-------QGMYVT-----HDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGP- 254 (789)
T ss_dssp ESST-------TCEEEE-----SSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSS-
T ss_pred EcCC-------CeEEEE-----cCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCC-
Confidence 4321 122221 12345788876555432 0 0222222 78888874321100
Q ss_pred CCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCC
Q 016877 290 AKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMP 326 (381)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~ 326 (381)
. ......+|..+ ...+|+.+...+
T Consensus 255 ----------~---~g~~g~l~~S~DgG~tW~~~~~~~ 279 (789)
T 1sqj_A 255 ----------W---GVTFGEVWRQNRTSGAWDDITPRV 279 (789)
T ss_dssp ----------S---CCCCCCEEEEETTTCCEEECCCCT
T ss_pred ----------C---CCCCceEEEEeCCCCceEECcCCC
Confidence 0 00123477776 788999987644
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=71.75 E-value=81 Score=31.13 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=45.1
Q ss_pred cceEEEEECCCC--c-EEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccC--CceEEecCCC
Q 016877 189 TAHTFVLDTETK--K-WQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLE--KEWRTEIPIP 263 (381)
Q Consensus 189 ~~~~~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~--~~W~~~~~~p 263 (381)
.++++.+|..+. . |+.+.+........ +...++.||+...... +....|.. + ..+ ..|+.+.+-.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~----~~~~l~~~---d--~~~~~~~~~~l~~~~ 362 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGA----PLKKIVRV---D--LSGSTPRFDTVVPES 362 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTC----TTCEEEEE---E--CSSSSCEEEEEECCC
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCC----CCCEEEEE---e--CCCCccccEEEecCC
Confidence 468999999876 6 77765433222222 2345777887754321 11122222 2 333 4788775433
Q ss_pred CCCcceeEEEeCCEEEEEccCC
Q 016877 264 RGGPHRACVVVDDRLLVIGGQE 285 (381)
Q Consensus 264 ~~~~~~~~~~~~~~l~v~GG~~ 285 (381)
... -..+...+++|++....+
T Consensus 363 ~~~-l~~~~~~~~~lv~~~~~d 383 (741)
T 1yr2_A 363 KDN-LESVGIAGNRLFASYIHD 383 (741)
T ss_dssp SSE-EEEEEEEBTEEEEEEEET
T ss_pred CCe-EEEEEEECCEEEEEEEEC
Confidence 221 123344578887776544
No 215
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=71.40 E-value=46 Score=28.14 Aligned_cols=86 Identities=7% Similarity=-0.004 Sum_probs=49.3
Q ss_pred EEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEEECCCCc
Q 016877 123 LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 123 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
.+|+++..+ ..+++||+.++ .+.... +. ....+++. -++++|+.... ...+.+||+.+.+
T Consensus 41 ~l~~~~~~~------~~i~~~~~~~~-~~~~~~-~~---~~~~~l~~~~dg~l~v~~~~--------~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 41 AVIFSDVRQ------NRTWAWSDDGQ-LSPEMH-PS---HHQNGHCLNKQGHLIACSHG--------LRRLERQREPGGE 101 (296)
T ss_dssp EEEEEEGGG------TEEEEEETTSC-EEEEES-SC---SSEEEEEECTTCCEEEEETT--------TTEEEEECSTTCC
T ss_pred EEEEEeCCC------CEEEEEECCCC-eEEEEC-CC---CCcceeeECCCCcEEEEecC--------CCeEEEEcCCCCc
Confidence 588887542 35889999987 554432 21 12234444 46778876421 2468999998888
Q ss_pred EEeCCCCC----CCCcccEEEEECCEEEEE
Q 016877 202 WQDLPPLP----VPRYAPATQLWRGRLHVM 227 (381)
Q Consensus 202 W~~~~~~p----~~r~~~~~~~~~~~lyv~ 227 (381)
.+.+.... ..+....+..-++++|+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 76653211 111122222346788886
No 216
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=70.77 E-value=83 Score=30.82 Aligned_cols=97 Identities=19% Similarity=0.285 Sum_probs=57.4
Q ss_pred eEEEECCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCCCCc------cceEEEEEeCCEEEEEcCCCCCCCCC
Q 016877 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMA------HSHLGMVTDGRYIYVVTGQYGPQCRG 187 (381)
Q Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~------r~~~~~~~~~~~iyv~GG~~~~~~~~ 187 (381)
+-++.++.||+.... ..++++|.++.+ |+.-...+.... ....+.++.+++||+...
T Consensus 61 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------- 125 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------- 125 (668)
T ss_dssp CCEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--------
T ss_pred CCEEECCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--------
Confidence 335679999998642 358899988764 887443321100 012235667888887532
Q ss_pred CcceEEEEECCCCc--EEeCCCCCC--CCcccEEEEECCEEEEEc
Q 016877 188 PTAHTFVLDTETKK--WQDLPPLPV--PRYAPATQLWRGRLHVMG 228 (381)
Q Consensus 188 ~~~~~~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~lyv~G 228 (381)
...++.+|.+|.+ |+.-..-+. .....+-++.++++|+..
T Consensus 126 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~ 169 (668)
T 1kv9_A 126 -DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGN 169 (668)
T ss_dssp -TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECC
T ss_pred -CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeC
Confidence 2468999988765 876432111 122233456788888753
No 217
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=70.49 E-value=78 Score=30.42 Aligned_cols=73 Identities=23% Similarity=0.393 Sum_probs=46.1
Q ss_pred EEEECCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCCCCCc----cceEEEEEeCCEEEEEcCCCCCCCCCCcc
Q 016877 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMA----HSHLGMVTDGRYIYVVTGQYGPQCRGPTA 190 (381)
Q Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 190 (381)
-++.+++||+.... +.++++|.++.+ |+.-...+.... ....+.++.+++||+... ..
T Consensus 64 P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---------dg 127 (582)
T 1flg_A 64 AIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---------DA 127 (582)
T ss_dssp CEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------TT
T ss_pred cEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------CC
Confidence 35679999998753 138899988764 887443322100 011234568899987532 24
Q ss_pred eEEEEECCCCc--EEeC
Q 016877 191 HTFVLDTETKK--WQDL 205 (381)
Q Consensus 191 ~~~~yd~~~~~--W~~~ 205 (381)
.++.+|.+|.+ |+.-
T Consensus 128 ~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 128 SVVALNKNTGKVVWKKK 144 (582)
T ss_dssp EEEEEESSSCCEEEEEE
T ss_pred EEEEEECCCCCEEeeec
Confidence 68999998765 8753
No 218
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=70.10 E-value=63 Score=29.21 Aligned_cols=64 Identities=8% Similarity=0.062 Sum_probs=33.4
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCe-EecCCCCCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
++.+++.|+.+ ..+.+||+.+.. ...+..+... ...-.+++.. +..+++.|+.++ .+..||.
T Consensus 243 ~~~~l~s~~~d------g~i~i~d~~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~~l~tg~~dg--------~v~vwd~ 307 (430)
T 2xyi_A 243 HESLFGSVADD------QKLMIWDTRNNNTSKPSHTVDAH-TAEVNCLSFNPYSEFILATGSADK--------TVALWDL 307 (430)
T ss_dssp CTTEEEEEETT------SEEEEEETTCSCSSSCSEEEECC-SSCEEEEEECSSCTTEEEEEETTS--------EEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECCCCCCCcceeEeecC-CCCeEEEEeCCCCCCEEEEEeCCC--------eEEEEeC
Confidence 45677777654 358889988652 1111111110 0111223333 334788887543 4788888
Q ss_pred CC
Q 016877 198 ET 199 (381)
Q Consensus 198 ~~ 199 (381)
.+
T Consensus 308 ~~ 309 (430)
T 2xyi_A 308 RN 309 (430)
T ss_dssp TC
T ss_pred CC
Confidence 76
No 219
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=69.89 E-value=28 Score=34.38 Aligned_cols=120 Identities=19% Similarity=0.175 Sum_probs=61.1
Q ss_pred EEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCC--------CCcceeEEEeCCEEEEEccCCCCC
Q 016877 217 TQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPR--------GGPHRACVVVDDRLLVIGGQEGDF 288 (381)
Q Consensus 217 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~--------~~~~~~~~~~~~~l~v~GG~~~~~ 288 (381)
-++.+++||+.... ...+-+ +...-+..|+.....+. .....+.+..+++||+... +
T Consensus 66 P~v~~g~vyv~~~~--------~~v~Al---D~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d--- 130 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF--------SVVYAL---DARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-D--- 130 (689)
T ss_dssp CEEETTEEEEECGG--------GCEEEE---ETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T---
T ss_pred CEEECCEEEEEcCC--------CeEEEE---ECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-C---
Confidence 35689999998541 111211 11123446876433221 0111234567888887542 2
Q ss_pred CCCCCCCccccccCceeecCceeEeC-CC--CCeEEcCC-CCCCCCCcceEEEEECCEEEEEcccccccCCceeeeeecc
Q 016877 289 MAKPGSPIFKCSRRNEVVYDDVYMLD-DE--MKWKVLPS-MPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGE 364 (381)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~yd-~~--~~W~~i~~-~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 364 (381)
..++.+| .+ ..|+.-.. -+........+.++.++.||+..+..... ....
T Consensus 131 -------------------g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~-------~~g~ 184 (689)
T 1yiq_A 131 -------------------GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG-------VRGY 184 (689)
T ss_dssp -------------------SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTC-------CBCE
T ss_pred -------------------CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccC-------CCCE
Confidence 1378888 43 46876542 11111122223366788888744321111 1235
Q ss_pred eEEEEcCCCc--eEE
Q 016877 365 IFQFNLNTLV--AVL 377 (381)
Q Consensus 365 v~~yd~~~~~--W~~ 377 (381)
++.||.++++ |+.
T Consensus 185 v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 185 VTAYDAETGKEAWRF 199 (689)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 8999988876 754
No 220
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=69.09 E-value=52 Score=27.80 Aligned_cols=145 Identities=9% Similarity=-0.003 Sum_probs=69.2
Q ss_pred EEEEecCCCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEe--eecccccccccCcceEeecCCCCCeEEccCCC-
Q 016877 35 FFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPELKWEKMKAAP- 109 (381)
Q Consensus 35 ~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p- 109 (381)
.||+++..++ .+..||+.++. ...+.. ...+++.. +..+... .-...+..+|+.+.+.+.+....
T Consensus 41 ~l~~~~~~~~-----~i~~~~~~~~~~~~~~~~~---~~~~l~~~~dg~l~v~~--~~~~~i~~~d~~~g~~~~~~~~~~ 110 (296)
T 3e5z_A 41 AVIFSDVRQN-----RTWAWSDDGQLSPEMHPSH---HQNGHCLNKQGHLIACS--HGLRRLERQREPGGEWESIADSFE 110 (296)
T ss_dssp EEEEEEGGGT-----EEEEEETTSCEEEEESSCS---SEEEEEECTTCCEEEEE--TTTTEEEEECSTTCCEEEEECEET
T ss_pred EEEEEeCCCC-----EEEEEECCCCeEEEECCCC---CcceeeECCCCcEEEEe--cCCCeEEEEcCCCCcEEEEeeccC
Confidence 4777775333 67889988764 222211 11222211 1122111 11236888998887776653311
Q ss_pred ---CCCCCceEEEECCEEEEE----ecCCC-------CCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEE
Q 016877 110 ---VPRLDGAAIQIKNLLYVF----AGYGS-------IDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYI 174 (381)
Q Consensus 110 ---~~r~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~i 174 (381)
..+....++.-++++|+. |.... .......++.+|+. ++...+.... ....+++. -++++
T Consensus 111 ~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~~~~gi~~s~dg~~ 185 (296)
T 3e5z_A 111 GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR----VKPNGLAFLPSGNL 185 (296)
T ss_dssp TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC----SSEEEEEECTTSCE
T ss_pred CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC----CCCccEEECCCCCE
Confidence 111122223336688886 43210 11112368999987 5544432211 11223444 34555
Q ss_pred EEEcCCCCCCCCCCcceEEEEECC-CCcE
Q 016877 175 YVVTGQYGPQCRGPTAHTFVLDTE-TKKW 202 (381)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~-~~~W 202 (381)
++.... ...+++||+. +.+.
T Consensus 186 lv~~~~--------~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 186 LVSDTG--------DNATHRYCLNARGET 206 (296)
T ss_dssp EEEETT--------TTEEEEEEECSSSCE
T ss_pred EEEeCC--------CCeEEEEEECCCCcC
Confidence 544321 3568888876 4444
No 221
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=68.36 E-value=54 Score=27.74 Aligned_cols=148 Identities=7% Similarity=-0.017 Sum_probs=68.5
Q ss_pred cCEEEEecCCC--CCcccceeeeeeCCCce-eeecCC----CCCCCceeEEe---eecccccccccCcceEeecCCCCCe
Q 016877 33 ADFFWASSSKF--TSSYLNIASNWSPYHNS-IILPNN----GPQKGENIGVK---TKKDVVPKRILPATFQDLPAPELKW 102 (381)
Q Consensus 33 ~~~ly~~GG~~--~~~~~~~~~~~d~~~~~-~~~p~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~W 102 (381)
++.+|+..... .....+.+..||+.+++ ..+... ......++... +..+.... ...+..+|+. .+.
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---~~~l~~~d~~-g~~ 103 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---RLGLLVVQTD-GTF 103 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---TTEEEEEETT-SCE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---CCCEEEEeCC-CCE
Confidence 67888871100 00122367889988777 333210 00111222211 11222211 2257788887 666
Q ss_pred EEc-cCCCCC--CCC-ceEEE-ECCEEEEEecCCC---------CCCcccceEEEeCCCCeEecCCC-CCCCCccceEEE
Q 016877 103 EKM-KAAPVP--RLD-GAAIQ-IKNLLYVFAGYGS---------IDYVHSHVDIYNFTDNTWGGRFD-MPREMAHSHLGM 167 (381)
Q Consensus 103 ~~l-~~~p~~--r~~-~~~~~-~~~~iyv~GG~~~---------~~~~~~~~~~yd~~~~~W~~~~~-~~~~~~r~~~~~ 167 (381)
..+ ...... ... ..++. -++.+|+...... .......+++||+. .+...+.. +.. ...+
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~-----~~~i 177 (314)
T 1pjx_A 104 EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF-----PNGI 177 (314)
T ss_dssp EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS-----EEEE
T ss_pred EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC-----cceE
Confidence 655 332211 111 22222 2568887664321 11112468999987 55544321 111 1233
Q ss_pred EEe-----CC-EEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 168 VTD-----GR-YIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 168 ~~~-----~~-~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
+.. ++ .+|+.... ...+++||++
T Consensus 178 ~~~~~~d~dg~~l~v~~~~--------~~~i~~~~~~ 206 (314)
T 1pjx_A 178 AVRHMNDGRPYQLIVAETP--------TKKLWSYDIK 206 (314)
T ss_dssp EEEECTTSCEEEEEEEETT--------TTEEEEEEEE
T ss_pred EEecccCCCCCEEEEEECC--------CCeEEEEECC
Confidence 333 33 57776421 2568888876
No 222
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=67.36 E-value=76 Score=32.86 Aligned_cols=241 Identities=10% Similarity=-0.033 Sum_probs=0.0
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceE-EEeCCCCeEecCCCCCCCCccceEEEEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVD-IYNFTDNTWGGRFDMPREMAHSHLGMVT 169 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 169 (381)
.++.++..+.....+...+..+....... +++.++++.. ...++ ++|..+.+-..+..... ........
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~------~~~l~~~~d~~~~~~~~l~~~~~---~~~~~~~S 387 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR------EGDFLGIYDYRTGKAEKFEENLG---NVFAMGVD 387 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET------TEEEEEEEETTTCCEEECCCCCC---SEEEEEEC
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC------CCceEEEEECCCCCceEecCCcc---ceeeeEEC
Q ss_pred eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEccCCC-----CCCCCCccceEe
Q 016877 170 DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGE-----NRYTPEVDHWSL 244 (381)
Q Consensus 170 ~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~-----~~~~~~~~~~~~ 244 (381)
-+++..+++..++ .++.+|+++.+-..+..-........+..-+++.+++++... .........|+
T Consensus 388 pDG~~la~~~~~~--------~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d- 458 (1045)
T 1k32_A 388 RNGKFAVVANDRF--------EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD- 458 (1045)
T ss_dssp TTSSEEEEEETTS--------EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE-
T ss_pred CCCCEEEEECCCC--------eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE-
Q ss_pred eeecCCccCCceEEecCCCCCCcceeEEEeCCEEEEEccCCCCCCCCCCCCccccccCceeecCce--------eEeC-C
Q 016877 245 AVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDV--------YMLD-D 315 (381)
Q Consensus 245 ~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v--------~~yd-~ 315 (381)
..+.+...+..............-+..|+........ ........++ +..- .
T Consensus 459 ------~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 519 (1045)
T 1k32_A 459 ------MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLD-------------PSPDRVVLNFSFEVVSKPFVIPLI 519 (1045)
T ss_dssp ------TTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCC-------------CEECSSSSCEECCSCBEEEEEESS
T ss_pred ------CCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCC-------------cCcchhccccccccCceeEEEEeC
Q ss_pred CCCeEE-----------------------cCCCCCCCCCcceEEEEECCEEEEE-----------cccccccCCceeeee
Q 016877 316 EMKWKV-----------------------LPSMPKPDSHIEFAWVLVNNSIVIV-----------GGTTEKHPTTKKMVL 361 (381)
Q Consensus 316 ~~~W~~-----------------------i~~~~~~~~~~~~~~~~~~~~l~v~-----------GG~~~~~~~~~~~~~ 361 (381)
...+.. +..++.+...........++++++. .......
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~-------- 591 (1045)
T 1k32_A 520 PGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKG-------- 591 (1045)
T ss_dssp TTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCE--------
T ss_pred CCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCc--------
Q ss_pred ecceEEEEcCCCceEEee
Q 016877 362 VGEIFQFNLNTLVAVLNA 379 (381)
Q Consensus 362 ~~~v~~yd~~~~~W~~i~ 379 (381)
.++.||+++.+.+.+.
T Consensus 592 --~l~~~d~~~~~~~~l~ 607 (1045)
T 1k32_A 592 --VLLKYDVKTRKVTEVK 607 (1045)
T ss_dssp --EEEEEETTTCCEEEEE
T ss_pred --eEEEEECCCCcEEEee
No 223
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=66.54 E-value=73 Score=28.60 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=61.0
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCC--CCCCCccceEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD--MPREMAHSHLG 166 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~r~~~~ 166 (381)
.+.++++.....+.+.+ ....-.+++.. ++.||+.--. ...++++++.....+.+.. +..| .+
T Consensus 97 ~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~p-----~g 163 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNVEEVVSTGLESP-----GG 163 (386)
T ss_dssp CEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCCEEEEECSSCSCC-----CC
T ss_pred cceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCC------CCcEEEEecCCCCcEEEEeCCCCCc-----cE
Confidence 45666666665544432 11122233332 5689987421 2458899998776555422 2222 23
Q ss_pred EEE--eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC--CCCCCCcccEEEEE--CCEEEEEc
Q 016877 167 MVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQLW--RGRLHVMG 228 (381)
Q Consensus 167 ~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~G 228 (381)
+++ .++.||+.-.. ...+++++++...-+.+. .+..| ..+++. ++.||+.-
T Consensus 164 lavd~~~g~lY~~d~~--------~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td 220 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSG--------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTD 220 (386)
T ss_dssp EEEETTTTEEEEEETT--------TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEE
T ss_pred EEEEeCCCeEEEEcCC--------CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEec
Confidence 444 47899987421 356888888755432221 22222 233443 67888874
No 224
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=66.02 E-value=74 Score=28.45 Aligned_cols=110 Identities=6% Similarity=-0.126 Sum_probs=54.2
Q ss_pred cCEEEEecC-CCCCcccceeeeeeCCCce--eeecCCCCCCCceeEEeee-cccccc-------cccCcceEeecCCCCC
Q 016877 33 ADFFWASSS-KFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTK-KDVVPK-------RILPATFQDLPAPELK 101 (381)
Q Consensus 33 ~~~ly~~GG-~~~~~~~~~~~~~d~~~~~--~~~p~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~ 101 (381)
..++|+.-+ ..+... .+..||+.+++ ..+|..... ...+..-++ .|.... ....+.+..+|+.+.+
T Consensus 32 ~~~~yv~~~~~~~~~~--~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 32 GRRSYINLPAHHSAII--QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCEEEEeCCcccCCcc--EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 467888865 222111 88999999988 556552211 222222222 232221 0123467788887654
Q ss_pred eEEccCCC-CCCC----C-ceEEE-E-CCEEEEEecCCCCCCcccceEEEeCCCCeEe
Q 016877 102 WEKMKAAP-VPRL----D-GAAIQ-I-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG 151 (381)
Q Consensus 102 W~~l~~~p-~~r~----~-~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 151 (381)
-..--+++ .+|. . ...+. - +.++|+..-.. .+.+.++| .+++-.
T Consensus 109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~-----~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA-----GPAVGLVV-QGGSSD 160 (373)
T ss_pred EEEEEECCCccccccCCCccceEECCCCCEEEEEecCC-----CCeEEEEE-CCCCEE
Confidence 32211222 1111 1 12222 2 34677764211 24588999 877543
No 225
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=65.82 E-value=45 Score=31.01 Aligned_cols=61 Identities=13% Similarity=0.242 Sum_probs=38.9
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEec-----C----CCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcce
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-----R----FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAH 191 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-----~----~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 191 (381)
++++|+|-| +..|+||..+++-.. + +.+|. +-. ++...++++|+|-| +.
T Consensus 367 ~~k~yfFkG--------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~---~iD-AA~~~~g~~YFFkg----------~~ 424 (450)
T 1su3_A 367 TGKTYFFVA--------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGH---KVD-AVFMKDGFFYFFHG----------TR 424 (450)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECSSCSEEHHHHSTTSCS---CCS-EEEEETTEEEEEET----------TE
T ss_pred CCeEEEEeC--------CEEEEEeCCCccccCCCCcchhhcCCCCCC---Ccc-EEEEcCCeEEEEeC----------CE
Confidence 579999976 358999977554322 1 12222 222 33346899999965 56
Q ss_pred EEEEECCCCcEE
Q 016877 192 TFVLDTETKKWQ 203 (381)
Q Consensus 192 ~~~yd~~~~~W~ 203 (381)
.|+||..+.+=.
T Consensus 425 ywr~d~~~~~v~ 436 (450)
T 1su3_A 425 QYKFDPKTKRIL 436 (450)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCcceEe
Confidence 899998876643
No 226
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=65.37 E-value=28 Score=32.44 Aligned_cols=52 Identities=13% Similarity=0.139 Sum_probs=28.6
Q ss_pred EEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEe--C----CCCCCCCcccEEEEE--CCEEEEEcc
Q 016877 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQD--L----PPLPVPRYAPATQLW--RGRLHVMGG 229 (381)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~--~----~~~p~~r~~~~~~~~--~~~lyv~GG 229 (381)
+++...+++|+|=| ..+|+++.....+.. + +.+|.. --++... ++++|+|=|
T Consensus 267 Ai~~~~ge~y~Fkg----------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~--iDAa~~~~~~g~~~fFKg 326 (450)
T 1su3_A 267 AITTIRGEVMFFKD----------RFYMRTNPFYPEVELNFISVFWPQLPNG--LEAAYEFADRDEVRFFKG 326 (450)
T ss_dssp EEEEETTEEEEEET----------TEEEECCTTSSSCEEEEGGGTCTTSCSS--CCEEEEEGGGTEEEEEET
T ss_pred eEEecCCeEEEEeC----------CEEEEEcCCCCcccceehhHhccCCCCC--eeEEEEEcCCCeEEEEeC
Confidence 45668999999965 345666654433211 1 123322 1223332 688998865
No 227
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=64.98 E-value=60 Score=27.01 Aligned_cols=90 Identities=14% Similarity=0.056 Sum_probs=48.5
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
++.||+.-.. ...+.++|+....-..+..... ...+.+++. ++.||+.-.. .+.++++|+.
T Consensus 47 ~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~---~~p~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~ 109 (267)
T 1npe_A 47 DKVVYWTDIS------EPSIGRASLHGGEPTTIIRQDL---GSPEGIALDHLGRTIFWTDSQ--------LDRIEVAKMD 109 (267)
T ss_dssp TTEEEEEETT------TTEEEEEESSSCCCEEEECTTC---CCEEEEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEECC------CCEEEEEecCCCCcEEEEECCC---CCccEEEEEecCCeEEEEECC--------CCEEEEEEcC
Confidence 4689987532 2458899987664333211111 123445553 5799987431 3568899987
Q ss_pred CCcEEeCCCCCCCCcccEEEEE--CCEEEEEc
Q 016877 199 TKKWQDLPPLPVPRYAPATQLW--RGRLHVMG 228 (381)
Q Consensus 199 ~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~G 228 (381)
...-+.+.+....+ -..+++. +++||+..
T Consensus 110 g~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 110 GTQRRVLFDTGLVN-PRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp SCSCEEEECSSCSS-EEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCC-ccEEEEeeCCCEEEEEE
Confidence 54333222111111 1233443 68899885
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=64.96 E-value=36 Score=29.66 Aligned_cols=140 Identities=5% Similarity=-0.114 Sum_probs=68.9
Q ss_pred CEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--eecccccccccCcceEeecCCCCCeEEccCCCC
Q 016877 34 DFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (381)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p~ 110 (381)
+.+|+++... ..+.+||+.++. ..+... ....++... +...... ...++.+|+.+.+.+.+...+.
T Consensus 61 ~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~~--~~v~~i~~~~dg~l~v~~----~~gl~~~d~~~g~~~~~~~~~~ 129 (326)
T 2ghs_A 61 GTAWWFNILE-----RELHELHLASGRKTVHALP--FMGSALAKISDSKQLIAS----DDGLFLRDTATGVLTLHAELES 129 (326)
T ss_dssp TEEEEEEGGG-----TEEEEEETTTTEEEEEECS--SCEEEEEEEETTEEEEEE----TTEEEEEETTTCCEEEEECSST
T ss_pred CEEEEEECCC-----CEEEEEECCCCcEEEEECC--CcceEEEEeCCCeEEEEE----CCCEEEEECCCCcEEEEeeCCC
Confidence 6777776532 367899998877 333221 111122211 1222221 2348889988888776654332
Q ss_pred CC--CCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-C-CEEEEEcCCCCCC
Q 016877 111 PR--LDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G-RYIYVVTGQYGPQ 184 (381)
Q Consensus 111 ~r--~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~ 184 (381)
.. .......+ ++++|+.............++++| +.+...+..-. ....+.+.. + +.+|+....
T Consensus 130 ~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~----~~~~~i~~s~dg~~lyv~~~~---- 199 (326)
T 2ghs_A 130 DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI----SIPNSICFSPDGTTGYFVDTK---- 199 (326)
T ss_dssp TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE----SSEEEEEECTTSCEEEEEETT----
T ss_pred CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC----cccCCeEEcCCCCEEEEEECC----
Confidence 11 11112222 557776432211112234688898 45555432100 112233333 3 368876421
Q ss_pred CCCCcceEEEEECC
Q 016877 185 CRGPTAHTFVLDTE 198 (381)
Q Consensus 185 ~~~~~~~~~~yd~~ 198 (381)
...+++||..
T Consensus 200 ----~~~I~~~d~~ 209 (326)
T 2ghs_A 200 ----VNRLMRVPLD 209 (326)
T ss_dssp ----TCEEEEEEBC
T ss_pred ----CCEEEEEEcc
Confidence 3568899875
No 229
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=64.53 E-value=1e+02 Score=29.50 Aligned_cols=102 Identities=11% Similarity=0.140 Sum_probs=49.8
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
+++.++.|+.+ ..+.++|..+.+....-............++. ++..++.++.++ .+..+|+.+.
T Consensus 250 dg~~l~s~s~D------~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~--------~i~~~~~~~~ 314 (611)
T 1nr0_A 250 DGTKIASASAD------KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW-TKQALVSISANG--------FINFVNPELG 314 (611)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSGGGCEEEEEE-CSSCEEEEETTC--------CEEEEETTTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCceeeeecCCCCccceeEEEEE-cCCEEEEEeCCC--------cEEEEeCCCC
Confidence 56777777764 35788899887765432222211122223333 455555555433 3667787765
Q ss_pred cEEeCCCCCCCCcccEEEE-ECCEEEEEccCCCCCCCCCccceE
Q 016877 201 KWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (381)
Q Consensus 201 ~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~ 243 (381)
+-...-. .....-.+++. -+++.++.|+.++ .+..|+
T Consensus 315 ~~~~~~~-gh~~~v~~l~~spdg~~l~s~s~D~-----~v~~Wd 352 (611)
T 1nr0_A 315 SIDQVRY-GHNKAITALSSSADGKTLFSADAEG-----HINSWD 352 (611)
T ss_dssp EEEEEEC-CCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CcceEEc-CCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEE
Confidence 4222111 11111112222 2566666766543 455665
No 230
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=64.33 E-value=98 Score=29.25 Aligned_cols=198 Identities=12% Similarity=0.028 Sum_probs=90.2
Q ss_pred EEECCEEEEEecC-CCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEE
Q 016877 118 IQIKNLLYVFAGY-GSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLD 196 (381)
Q Consensus 118 ~~~~~~iyv~GG~-~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd 196 (381)
...+++.+++++. ++ .+.+|+..+.+-+++...+. ....+.+...+++......++.. ....+|..+
T Consensus 29 ~~~DG~~la~~s~~~g------~~~lw~~~~g~~~~lt~~~~---~~~~~~~~spd~~l~~~~~~~g~---~~~~l~~~~ 96 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSEG------SVNAYLYDGGETVKLNREPI---NSVLDPHYGVGRVILVRDVSKGA---EQHALFKVN 96 (582)
T ss_dssp EEETTTEEEEEEEETT------EEEEEEEETTEEEECCSSCC---SEECEECTTCSEEEEEEECSTTS---CCEEEEEEE
T ss_pred cCCCCCeEEEEEccCC------ceeEEEEcCCCcEeeecccc---cccccccCCCCeEEEEeccCCCC---cceEEEEEe
Confidence 4557665666553 22 23444555555555543331 11122222334554443321111 135678888
Q ss_pred C--CCCcEEeCCCCCCCCcccEEEEEC-CEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCCcceeEEE
Q 016877 197 T--ETKKWQDLPPLPVPRYAPATQLWR-GRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVV 273 (381)
Q Consensus 197 ~--~~~~W~~~~~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~ 273 (381)
. ....- .+...+..+ ..+...+ +.++++.+..+ ....|++ .+.+-+.+...+. . .....
T Consensus 97 ~~~~g~~~-~l~~~~~~~--~~~~s~dg~~~~~~s~~~~-----~~~l~d~-------~~g~~~~l~~~~~--~-~~~~s 158 (582)
T 3o4h_A 97 TSRPGEEQ-RLEAVKPMR--ILSGVDTGEAVVFTGATED-----RVALYAL-------DGGGLRELARLPG--F-GFVSD 158 (582)
T ss_dssp TTSTTCCE-ECTTSCSBE--EEEEEECSSCEEEEEECSS-----CEEEEEE-------ETTEEEEEEEESS--C-EEEEE
T ss_pred ccCCCccc-cccCCCCce--eeeeCCCCCeEEEEecCCC-----CceEEEc-------cCCcEEEeecCCC--c-eEEEC
Confidence 7 44332 333332222 2233334 44555544332 1225543 3444444433232 1 12334
Q ss_pred eCCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceEEEEECCEEEEEcccccc
Q 016877 274 VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEK 352 (381)
Q Consensus 274 ~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~ 352 (381)
-+++.+++++..... ..++|.+| .+.+++.+..-+ ......+...|++.++.+..++.
T Consensus 159 pDG~~la~~~~~~~~------------------~~~i~~~d~~~g~~~~l~~~~---~~~~~~~~SpDG~~l~~~~~~~~ 217 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGG------------------RVSLFTSNLSSGGLRVFDSGE---GSFSSASISPGMKVTAGLETARE 217 (582)
T ss_dssp EETTEEEEEEEEETT------------------EEEEEEEETTTCCCEEECCSS---CEEEEEEECTTSCEEEEEECSSC
T ss_pred CCCCEEEEEEEcCCC------------------CeEEEEEcCCCCCceEeecCC---CccccceECCCCCEEEEccCCCe
Confidence 466666655543210 12488888 777777664321 11112224446766653332221
Q ss_pred cCCceeeeeecceEEEEcCCCceE
Q 016877 353 HPTTKKMVLVGEIFQFNLNTLVAV 376 (381)
Q Consensus 353 ~~~~~~~~~~~~v~~yd~~~~~W~ 376 (381)
..++++|+++++..
T Consensus 218 ----------~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 218 ----------ARLVTVDPRDGSVE 231 (582)
T ss_dssp ----------EEEEEECTTTCCEE
T ss_pred ----------eEEEEEcCCCCcEE
Confidence 25899998887765
No 231
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=64.09 E-value=72 Score=27.63 Aligned_cols=152 Identities=8% Similarity=0.014 Sum_probs=67.2
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecC-CCCCCCceeEEeee-cccccccccCcceEeecCCCCCeEEccCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPN-NGPQKGENIGVKTK-KDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W~~l~~~p 109 (381)
++.+++.|+.++ .+..||..+++ ..+.. ........+..... .....+ .....+..+|..+.+-.. ..+.
T Consensus 138 ~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg-~~dg~i~iwd~~~~~~~~-~~~~ 210 (343)
T 3lrv_A 138 NTEYFIWADNRG-----TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY-SPDGILDVYNLSSPDQAS-SRFP 210 (343)
T ss_dssp -CCEEEEEETTC-----CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE-CTTSCEEEEESSCTTSCC-EECC
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCCCCc-cEEe
Confidence 556677777555 67889998877 43322 11111111111111 111111 123467788877665320 1122
Q ss_pred C-CCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEe-cCCCCCCCCccc-eEEEEEe-CCEEEEEcCC-CC
Q 016877 110 V-PRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG-GRFDMPREMAHS-HLGMVTD-GRYIYVVTGQ-YG 182 (381)
Q Consensus 110 ~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~~~r~-~~~~~~~-~~~iyv~GG~-~~ 182 (381)
. ....-.++.+ ++..++.|+ ++ .+.++|+.+.+-. .+..+....... ..+++.. +++.++.|+. ++
T Consensus 211 ~~h~~~v~~l~fs~~g~~l~s~~-~~------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~ 283 (343)
T 3lrv_A 211 VDEEAKIKEVKFADNGYWMVVEC-DQ------TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN 283 (343)
T ss_dssp CCTTSCEEEEEECTTSSEEEEEE-SS------BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT
T ss_pred ccCCCCEEEEEEeCCCCEEEEEe-CC------eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC
Confidence 2 1112222222 456666666 21 4888898765321 122211100000 1123333 4555555432 22
Q ss_pred CCCCCCcceEEEEECCCCcEEe
Q 016877 183 PQCRGPTAHTFVLDTETKKWQD 204 (381)
Q Consensus 183 ~~~~~~~~~~~~yd~~~~~W~~ 204 (381)
.-.+|.|+.....|..
T Consensus 284 ------~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 284 ------SLTIYKFDKKTKNWTK 299 (343)
T ss_dssp ------EEEEEEECTTTCSEEE
T ss_pred ------cEEEEEEcccccceEe
Confidence 2345555567778987
No 232
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=63.16 E-value=92 Score=28.54 Aligned_cols=65 Identities=15% Similarity=0.202 Sum_probs=44.7
Q ss_pred ceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCC
Q 016877 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQ 180 (381)
Q Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~ 180 (381)
..+-..++.+|++--......+-+.+.+-+.....|..+. +|.-......-.+..++.||+||-.
T Consensus 342 PCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slr-fp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 342 PCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLR-FPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp EEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEE-CTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred chhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhhee-ccccccccCCCcceeCCEEEEEecc
Confidence 4445679999987654434444566888888888999863 2332234455578899999999954
No 233
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=61.49 E-value=86 Score=27.64 Aligned_cols=108 Identities=4% Similarity=-0.094 Sum_probs=55.6
Q ss_pred EECCEEEEEecCCCCCCcccceEEEeCCCCeEecCC--CCCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceEEEE
Q 016877 119 QIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVL 195 (381)
Q Consensus 119 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~y 195 (381)
.-++..++.++.+.... ..++.+|.......... .+... ...-.+++. -++++++.|+.++ .+..|
T Consensus 228 spdg~~l~~~s~d~~~~--~~i~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~Spdg~~lasgs~D~--------~V~iw 296 (365)
T 4h5i_A 228 IADDTVLIAASLKKGKG--IVLTKISIKSGNTSVLRSKQVTNR-FKGITSMDVDMKGELAVLASNDN--------SIALV 296 (365)
T ss_dssp EETTEEEEEEEESSSCC--EEEEEEEEETTEEEEEEEEEEESS-CSCEEEEEECTTSCEEEEEETTS--------CEEEE
T ss_pred cCCCCEEEEEecCCcce--eEEeecccccceecceeeeeecCC-CCCeEeEEECCCCCceEEEcCCC--------EEEEE
Confidence 34778888877654332 23666776665544321 11110 011122333 3677777887543 37889
Q ss_pred ECCCCcEEeCCCCCCCCcc--cEEEE-ECCEEEEEccCCCCCCCCCccceEe
Q 016877 196 DTETKKWQDLPPLPVPRYA--PATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 196 d~~~~~W~~~~~~p~~r~~--~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
|.++.+-. ......... .+++. -++++++.|+.++ .+..|++
T Consensus 297 d~~~~~~~--~~~~~gH~~~V~~v~fSpdg~~laS~S~D~-----tvrvw~i 341 (365)
T 4h5i_A 297 KLKDLSMS--KIFKQAHSFAITEVTISPDSTYVASVSAAN-----TIHIIKL 341 (365)
T ss_dssp ETTTTEEE--EEETTSSSSCEEEEEECTTSCEEEEEETTS-----EEEEEEC
T ss_pred ECCCCcEE--EEecCcccCCEEEEEECCCCCEEEEEeCCC-----eEEEEEc
Confidence 99876532 111111111 12222 3677777776543 5667765
No 234
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=60.69 E-value=1.3e+02 Score=29.57 Aligned_cols=153 Identities=10% Similarity=-0.011 Sum_probs=75.9
Q ss_pred hhhee--EcCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--ee-cccccccccCcceEeecCCCC
Q 016877 27 LGFAL--VADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--TK-KDVVPKRILPATFQDLPAPEL 100 (381)
Q Consensus 27 ~~~~~--~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~ 100 (381)
+++|+ .++.||+.-.. .+.+..+++.... ..+-........++++- .+ +|..... ....++++++...
T Consensus 456 ~glavD~~~g~LY~tD~~-----~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~-~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGV 529 (699)
T ss_dssp CCEECCCSSSBCEECCTT-----TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS-SSCCEEBCCSSSC
T ss_pred ceEEEEeeCCcEEEEecc-----CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC-CCCeEEEEeCCCC
Confidence 44555 46788887432 2356888887665 33322111112233321 12 3322211 1245677666543
Q ss_pred CeEEcc--CCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEE
Q 016877 101 KWEKMK--AAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYV 176 (381)
Q Consensus 101 ~W~~l~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv 176 (381)
.-+.+. .+..| .++++- +++||+.=.. ...|+++|+....-+.+...... .....++++.++.||+
T Consensus 530 ~~~~l~~~~l~~P---nGlavd~~~~~LY~aD~~------~~~I~~~d~dG~~~~~~~~~~~~-~~~P~glavd~~~lyw 599 (699)
T 1n7d_A 530 DIYSLVTENIQWP---NGITLDLLSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFW 599 (699)
T ss_dssp CCCEESCSSCSSC---CCEEECTTTCCEEEEETT------TTEEEEECSSSSCCEEECCCSSS-CSSCCCCEEETTEEEE
T ss_pred CeeEEEeCCCCCc---cEEEEeccCCEEEEEecC------CCeEEEEccCCCceEEEEecCCc-CCCceEeEEECCEEEE
Confidence 322222 12112 223332 5689986532 24588999875433333222111 1223456778889998
Q ss_pred EcCCCCCCCCCCcceEEEEECCCCcEE
Q 016877 177 VTGQYGPQCRGPTAHTFVLDTETKKWQ 203 (381)
Q Consensus 177 ~GG~~~~~~~~~~~~~~~yd~~~~~W~ 203 (381)
.-. ....|.++|+.+.+-.
T Consensus 600 td~--------~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 600 TDI--------INEAIFSANRLTGSDV 618 (699)
T ss_dssp ECS--------TTTCEEEEETTTEEEE
T ss_pred EeC--------CCCeEEEEEccCCCce
Confidence 842 1356899998766543
No 235
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=59.45 E-value=99 Score=30.60 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=58.4
Q ss_pred eEeecCCCCCeEEccCCCCC-CCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCC--CCCCCCccceEE
Q 016877 92 FQDLPAPELKWEKMKAAPVP-RLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSHLG 166 (381)
Q Consensus 92 ~~~~~~~~~~W~~l~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~r~~~~ 166 (381)
+.+||+.+++++.+..-... .....+... ++.|++.. . .-+.+||+++++++... .+|. ..-.+
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~-------~Gl~~~~~~~~~~~~~~~~gl~~---~~i~~ 563 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H-------GGVMRINPKDESQQSISFGSFSN---NEILS 563 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T-------TEEEEECC--CCCCBCCCCC------CCEEE
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c-------CceEEEecCCCceEEecccCCCc---cceEE
Confidence 45666666666554311111 111122222 45677543 2 12788999988887653 2332 22344
Q ss_pred EEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEE--CCEEEEEccCC
Q 016877 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSG 231 (381)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~ 231 (381)
++..++.|++... +-+.+||+++.+..... ++..... .++.. ++.|| |||.+
T Consensus 564 i~~~~g~lWi~t~----------~Gl~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~G~l~-fG~~~ 617 (758)
T 3ott_A 564 MTCVKNSIWVSTT----------NGLWIIDRKTMDARQQN-MTNKRFT-SLLFDPKEDCVY-LGGAD 617 (758)
T ss_dssp EEEETTEEEEEES----------SCEEEEETTTCCEEEC---CCCCCS-EEEEETTTTEEE-EECBS
T ss_pred EEECCCCEEEECC----------CCeEEEcCCCceeEEec-CCCCcee-eeEEECCCCcEE-EecCC
Confidence 5556888988642 33889999998876643 3332232 23322 45555 55543
No 236
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=58.58 E-value=2.8 Score=37.95 Aligned_cols=51 Identities=10% Similarity=0.095 Sum_probs=24.8
Q ss_pred EEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCc--EEeCCCCCCCCcccEEEEECCEEEEEccC
Q 016877 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK--WQDLPPLPVPRYAPATQLWRGRLHVMGGS 230 (381)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~ 230 (381)
.++.++.||+.+. ...++.+|.++.+ |+.-. . + ...+.++.++++|+.++.
T Consensus 5 P~v~~~~v~~gs~---------dg~v~a~d~~tG~~~W~~~~--~-~-~~s~p~~~~g~~~v~~s~ 57 (369)
T 2hz6_A 5 VTLPETLLFVSTL---------DGSLHAVSKRTGSIKWTLKE--D-P-VLQVPTHVEEPAFLPDPN 57 (369)
T ss_dssp ---CTTEEEEEET---------TSEEEEEETTTCCEEEEEEC--C-C-SCCCC-----CCEEECTT
T ss_pred CeeeCCEEEEEcC---------CCEEEEEECCCCCEEEEecC--C-C-ceecceEcCCCEEEEeCC
Confidence 4556777776542 2358889987654 76543 1 1 112233456778887643
No 237
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=58.05 E-value=78 Score=26.08 Aligned_cols=55 Identities=18% Similarity=0.328 Sum_probs=32.3
Q ss_pred ECCEEEEEecCCCCCCcccceEEEeCCCC---------eEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcc
Q 016877 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDN---------TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTA 190 (381)
Q Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---------~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 190 (381)
.++++|+|=|. ..|+++.... .|..+ |.. -.. +...++++|+|=| +
T Consensus 27 ~~g~~yfFkg~--------~~Wr~~~~~~~~~p~~Is~~wpgL---P~~---IDA-A~~~~~~~yfFkG----------~ 81 (219)
T 1hxn_A 27 NHGATYVFSGS--------HYWRLDTNRDGWHSWPIAHQWPQG---PST---VDA-AFSWEDKLYLIQD----------T 81 (219)
T ss_dssp TTSCEEEEETT--------EEEESSSSSCTTCCEEGGGTCTTS---CSS---CSE-EEEETTEEEEEET----------T
T ss_pred CCCcEEEEeCC--------EEEEEcCCCCCCCceEhhhhccCC---CCC---ccE-EEEECCcEEEecC----------C
Confidence 47889999763 3555554322 23332 322 122 2234899999965 5
Q ss_pred eEEEEECCC
Q 016877 191 HTFVLDTET 199 (381)
Q Consensus 191 ~~~~yd~~~ 199 (381)
.+|+|+..+
T Consensus 82 ~yw~~~~~~ 90 (219)
T 1hxn_A 82 KVYVFLTKG 90 (219)
T ss_dssp EEEEEECSS
T ss_pred EEEEEeCCC
Confidence 689998753
No 238
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=57.95 E-value=85 Score=26.47 Aligned_cols=62 Identities=15% Similarity=0.123 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECC--CCcEEeCCCCCC-CCcccEEEEE---CCEEEEEccCCCCCCCCCccceEe
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTE--TKKWQDLPPLPV-PRYAPATQLW---RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~-~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
++.+++.|+.++ .+..||.. ...++.+..+.. ...-.+++.. ++.+++.|+.++ .+..|++
T Consensus 22 ~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~ 88 (351)
T 3f3f_A 22 YGRHVATCSSDQ--------HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEE 88 (351)
T ss_dssp SSSEEEEEETTS--------EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEE
T ss_pred CCCEEEEeeCCC--------eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEec
Confidence 445556665433 35566655 334444332221 1122233333 367777777543 4666765
Q ss_pred e
Q 016877 245 A 245 (381)
Q Consensus 245 ~ 245 (381)
.
T Consensus 89 ~ 89 (351)
T 3f3f_A 89 D 89 (351)
T ss_dssp C
T ss_pred C
Confidence 3
No 239
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=56.93 E-value=96 Score=26.78 Aligned_cols=175 Identities=9% Similarity=0.037 Sum_probs=88.1
Q ss_pred hhheeE--cCEEEEecCCCCCcccceeeeeeCCC----ce--eeecCCCCCCCceeEEe--e-ecccccccccCcceEee
Q 016877 27 LGFALV--ADFFWASSSKFTSSYLNIASNWSPYH----NS--IILPNNGPQKGENIGVK--T-KKDVVPKRILPATFQDL 95 (381)
Q Consensus 27 ~~~~~~--~~~ly~~GG~~~~~~~~~~~~~d~~~----~~--~~~p~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~ 95 (381)
+++++- ++.||+.-.. .+.+.++|+.. .. ..++.. .....++++- . .+|..- .....+.++
T Consensus 33 ~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~glavd~~~~~ly~~d--~~~~~I~~~ 104 (316)
T 1ijq_A 33 VALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHSNIYWTD--SVLGTVSVA 104 (316)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSS-CSCCCEEEEETTTTEEEEEE--TTTTEEEEE
T ss_pred EEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCC-CCCcCEEEEeecCCeEEEEE--CCCCEEEEE
Confidence 444543 5789998653 23678888876 22 223221 1222444432 2 233321 123466777
Q ss_pred cCCCCCeEEcc--CCCCCCCCceEEE--ECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-
Q 016877 96 PAPELKWEKMK--AAPVPRLDGAAIQ--IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD- 170 (381)
Q Consensus 96 ~~~~~~W~~l~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~- 170 (381)
++....-..+. .+..|+ .+++ .++.||+..-.. ...++++++....-+.+..... ....++++.
T Consensus 105 ~~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d~~~-----~~~I~~~~~dG~~~~~~~~~~~---~~P~gla~d~ 173 (316)
T 1ijq_A 105 DTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTENI---QWPNGITLDL 173 (316)
T ss_dssp ETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCCEEEEECSSC---SCEEEEEEET
T ss_pred eCCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEccCC-----CCeEEEEcCCCCCeEEEEECCC---CCceEEEEec
Confidence 76654333332 222222 2333 267899875211 1358899887544333321111 223455554
Q ss_pred -CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCC-CCCCcccEEEEECCEEEEEc
Q 016877 171 -GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPL-PVPRYAPATQLWRGRLHVMG 228 (381)
Q Consensus 171 -~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~lyv~G 228 (381)
+++||+.-. ....++++|+....-+.+... .....-.++++.++.||+.-
T Consensus 174 ~~~~lY~~D~--------~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d 225 (316)
T 1ijq_A 174 LSGRLYWVDS--------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 225 (316)
T ss_dssp TTTEEEEEET--------TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred cCCEEEEEEC--------CCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEE
Confidence 689998732 146799999875432222211 11122246667789999985
No 240
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=56.55 E-value=97 Score=26.71 Aligned_cols=128 Identities=9% Similarity=-0.076 Sum_probs=62.6
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEE-ECCEEEEEecCCCCCCcccceEEEeCCCCe--EecCCCCC-----CCCc
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQ-IKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMP-----REMA 161 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~-----~~~~ 161 (381)
..+..+|+.+.+.........-..-..++. -++.|||....+ ..+.+||+.... -..+.... ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 142 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL------HQVFKLDPHSKEGPLLILGRSMQPGSDQNHF 142 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT------TEEEEECTTCSSCCSEEESBTTBCCCSTTCC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCC------CEEEEEeCCCCeEEEEEecccCCCCCCcccc
Confidence 357788887665433211100011122332 256788876432 358889987551 22221100 0001
Q ss_pred cceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCC-------CCCC-cccEEEEE-C-CEEEEEcc
Q 016877 162 HSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPL-------PVPR-YAPATQLW-R-GRLHVMGG 229 (381)
Q Consensus 162 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-------p~~r-~~~~~~~~-~-~~lyv~GG 229 (381)
.....+++. ++.||+..++. ...+.+||+....-..+... +... .-..+++- + +.|||...
T Consensus 143 ~~P~~ia~~~~~g~lyv~d~~~-------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 143 CQPTDVAVEPSTGAVFVSDGYC-------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp SSEEEEEECTTTCCEEEEECSS-------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred CCCcEEEEeCCCCeEEEEeCCC-------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 123455655 68899986421 25688999765443333211 1111 12344443 3 78999864
Q ss_pred C
Q 016877 230 S 230 (381)
Q Consensus 230 ~ 230 (381)
.
T Consensus 216 ~ 216 (329)
T 3fvz_A 216 E 216 (329)
T ss_dssp T
T ss_pred C
Confidence 3
No 241
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=55.11 E-value=1.7e+02 Score=28.93 Aligned_cols=136 Identities=8% Similarity=-0.047 Sum_probs=67.6
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCce-eEEeee----cccccccccCcceEeecCCCCCeEEcc
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGEN-IGVKTK----KDVVPKRILPATFQDLPAPELKWEKMK 106 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~W~~l~ 106 (381)
++.||+.+|..+ -+.+||+.+++ ..+.......... .+.... +.... ..-+.+||+.+.+++...
T Consensus 482 ~g~lWi~~~t~~-----Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt----~~Gl~~~~~~~~~~~~~~ 552 (758)
T 3ott_A 482 EGNVWVLLYNNK-----GIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF----HGGVMRINPKDESQQSIS 552 (758)
T ss_dssp TSCEEEEETTCS-----SEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE----TTEEEEECC--CCCCBCC
T ss_pred CCCEEEEccCCC-----CcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe----cCceEEEecCCCceEEec
Confidence 567898665432 25789999888 5543311110111 111111 11111 234788999888776553
Q ss_pred --CCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCC
Q 016877 107 --AAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGP 183 (381)
Q Consensus 107 --~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~ 183 (381)
.+|.. .-.++..-++.|++... +-+.+||+++.+..... ++.. ....++.. .++.|| |||.
T Consensus 553 ~~gl~~~-~i~~i~~~~g~lWi~t~--------~Gl~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~G~l~-fG~~--- 616 (758)
T 3ott_A 553 FGSFSNN-EILSMTCVKNSIWVSTT--------NGLWIIDRKTMDARQQN-MTNK--RFTSLLFDPKEDCVY-LGGA--- 616 (758)
T ss_dssp CCC---C-CEEEEEEETTEEEEEES--------SCEEEEETTTCCEEEC---CCC--CCSEEEEETTTTEEE-EECB---
T ss_pred ccCCCcc-ceEEEEECCCCEEEECC--------CCeEEEcCCCceeEEec-CCCC--ceeeeEEECCCCcEE-EecC---
Confidence 23321 12233334678887652 23789999998877642 2321 12222222 367776 6664
Q ss_pred CCCCCcceEEEEECCC
Q 016877 184 QCRGPTAHTFVLDTET 199 (381)
Q Consensus 184 ~~~~~~~~~~~yd~~~ 199 (381)
+-+..|||+.
T Consensus 617 ------~Gl~~f~p~~ 626 (758)
T 3ott_A 617 ------DGFGISHSNL 626 (758)
T ss_dssp ------SEEEEEEC--
T ss_pred ------CceEEEChhh
Confidence 3478899975
No 242
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=52.85 E-value=1.1e+02 Score=26.13 Aligned_cols=95 Identities=8% Similarity=-0.052 Sum_probs=51.7
Q ss_pred CcceEeecCCCCCeEEccCCCCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEE
Q 016877 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 167 (381)
...++++|+... .......+ ..-++++.. ++++||....... ..+..+|+.+.+.+.+...+. .+.....
T Consensus 52 ~~~I~~~d~~g~-~~~~~~~~--~~p~gia~~~dG~l~vad~~~~~----~~v~~~d~~~g~~~~~~~~~~--~~~~~g~ 122 (306)
T 2p4o_A 52 VGEIVSITPDGN-QQIHATVE--GKVSGLAFTSNGDLVATGWNADS----IPVVSLVKSDGTVETLLTLPD--AIFLNGI 122 (306)
T ss_dssp TTEEEEECTTCC-EEEEEECS--SEEEEEEECTTSCEEEEEECTTS----CEEEEEECTTSCEEEEEECTT--CSCEEEE
T ss_pred CCeEEEECCCCc-eEEEEeCC--CCceeEEEcCCCcEEEEeccCCc----ceEEEEcCCCCeEEEEEeCCC--ccccCcc
Confidence 346788887653 22222222 112233332 5678886532111 137888988888776655543 2333334
Q ss_pred E-EeCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 168 V-TDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 168 ~-~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
+ ..++.+|+.-- ....++++|+.+.
T Consensus 123 ~~~~~~~~~v~d~--------~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 123 TPLSDTQYLTADS--------YRGAIWLIDVVQP 148 (306)
T ss_dssp EESSSSEEEEEET--------TTTEEEEEETTTT
T ss_pred cccCCCcEEEEEC--------CCCeEEEEeCCCC
Confidence 3 34566777631 1357999999864
No 243
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=50.72 E-value=1.2e+02 Score=26.10 Aligned_cols=114 Identities=14% Similarity=0.034 Sum_probs=58.7
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCC----CeEecC-C-CCCCCCcc
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTD----NTWGGR-F-DMPREMAH 162 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~-~-~~~~~~~r 162 (381)
.+.++|..+.....+.+ ....-.+.+.. +++||+.--. ...+.++|+.. ..-+.+ . .+..|
T Consensus 11 ~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p--- 79 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQAP--- 79 (316)
T ss_dssp SEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT------TTEEEEEEC--------CEEEECSSCSCC---
T ss_pred eEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC------CCcEEEEECCCCCCCcccEEEEeCCCCCc---
Confidence 45667776666554422 12222334333 5689987643 24588888876 222222 1 22222
Q ss_pred ceEEEEE--eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC--CCCCCCcccEEEEE--CCEEEEEc
Q 016877 163 SHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQLW--RGRLHVMG 228 (381)
Q Consensus 163 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~G 228 (381)
.++++ .++.||+.-. ....++++|+....-+.+. .+..| ..+++. ++.||+..
T Consensus 80 --~glavd~~~~~ly~~d~--------~~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 80 --DGLAVDWIHSNIYWTDS--------VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTD 138 (316)
T ss_dssp --CEEEEETTTTEEEEEET--------TTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEE
T ss_pred --CEEEEeecCCeEEEEEC--------CCCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEc
Confidence 34444 4789998732 1356889998765433222 23333 233443 67899875
No 244
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=50.60 E-value=1e+02 Score=25.11 Aligned_cols=60 Identities=17% Similarity=0.261 Sum_probs=38.3
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecC---------CCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcce
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR---------FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAH 191 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---------~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 191 (381)
++++|+|-| +..|+||..+++-..- +.+|. +-. ++...++++|+|-| +.
T Consensus 127 ~gk~yfFkG--------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~---~iD-aAf~~~g~~YfFkg----------~~ 184 (207)
T 1pex_A 127 TGKTLLFSG--------NQVWRYDDTNHIMDKDYPRLIEEDFPGIGD---KVD-AVYEKNGYIYFFNG----------PI 184 (207)
T ss_dssp TSEEEEEET--------TEEEEEETTTTEECSSCCCBHHHHSTTSCS---CCS-EEEEETTEEEEEET----------TE
T ss_pred CCEEEEEeC--------CEEEEEeCcCccccCCCCccHHHcCCCCCC---Ccc-EEEEcCCcEEEEEC----------CE
Confidence 379999987 3488999876543211 11222 222 23346899999965 56
Q ss_pred EEEEECCCCcE
Q 016877 192 TFVLDTETKKW 202 (381)
Q Consensus 192 ~~~yd~~~~~W 202 (381)
.|+||..+.+=
T Consensus 185 y~rf~~~~~~v 195 (207)
T 1pex_A 185 QFEYSIWSNRI 195 (207)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEeCCccEE
Confidence 89999987653
No 245
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=50.53 E-value=1.5e+02 Score=28.51 Aligned_cols=55 Identities=16% Similarity=0.282 Sum_probs=28.2
Q ss_pred EEEEECCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCC------cceeEEEeCCEEEEE
Q 016877 216 ATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG------PHRACVVVDDRLLVI 281 (381)
Q Consensus 216 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~------~~~~~~~~~~~l~v~ 281 (381)
+-++.+++||+..... . .+-+ +...-+..|+.....+... ...+.+..+++||+.
T Consensus 63 ~P~v~~g~vyv~~~~~------~--v~Al---D~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~ 123 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS------R--LFAL---DAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFG 123 (582)
T ss_dssp CCEEETTEEEEEETTT------E--EEEE---ESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEE
T ss_pred ccEEECCEEEEEcCCC------C--EEEE---ECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEE
Confidence 3357899999986521 1 1111 1112344687654332210 012345678888875
No 246
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=48.73 E-value=2.1e+02 Score=28.38 Aligned_cols=110 Identities=14% Similarity=0.164 Sum_probs=53.8
Q ss_pred eEeecCCCCCeEEccC-C-----CC---CCCCceEEEE----CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCC-CC
Q 016877 92 FQDLPAPELKWEKMKA-A-----PV---PRLDGAAIQI----KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD-MP 157 (381)
Q Consensus 92 ~~~~~~~~~~W~~l~~-~-----p~---~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~~ 157 (381)
+++-+-...+|+++.. + +. .........+ .+.+|+..|..........+++=+=.-.+|+++.. .+
T Consensus 45 v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~ 124 (763)
T 3a0f_A 45 TYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVP 124 (763)
T ss_dssp EEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSC
T ss_pred EEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCcc
Confidence 5555555678998865 3 21 1222233333 25888876531111111223333334568998752 11
Q ss_pred CC---Cccc-eEEEEEe---CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCC
Q 016877 158 RE---MAHS-HLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPV 210 (381)
Q Consensus 158 ~~---~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 210 (381)
.+ ..|. ...+++. .+.+|+.+. ...+++=+-.-.+|+++..++.
T Consensus 125 ~~~~~~g~~~~~~l~v~p~~~~~v~a~~~---------~~~l~~S~DgG~TW~~~~~~~~ 175 (763)
T 3a0f_A 125 MGANDMGRNGGERLAVNPHWTDELWFGSR---------TQGLWRSTDRAQTWSRMNQLPD 175 (763)
T ss_dssp CCTTSTTTTSBCCEEECTTSTTCEEEECS---------SSCEEEESSTTSSCEECTTSCC
T ss_pred cCccccCccccceEEECCCCCCEEEEEeC---------CCcEEEECCCCcCccccccCcc
Confidence 10 0121 1234443 367887642 1234444444578999987664
No 247
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=47.11 E-value=1.7e+02 Score=26.68 Aligned_cols=96 Identities=7% Similarity=-0.026 Sum_probs=49.9
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEECC-EEEEEecCCCCCCcccceEEEeCCCCeEe---cCCCCCCCCccceE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQIKN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWG---GRFDMPREMAHSHL 165 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~---~~~~~~~~~~r~~~ 165 (381)
..+.++|+..++.+.+.+ ...+..+-++..++ .||+....... ....+..++.. ..|. .++.+.. .+
T Consensus 159 ~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~~-g~~~~~~~l~~~~~-----p~ 229 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNN--DRPNNYILTRE-SGFKVITELTKGQN-----CN 229 (430)
T ss_dssp EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEGG-GTSCSEEEEEECSS-----CC
T ss_pred CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeCC-CceeeeeeeccCCC-----ce
Confidence 467788888777666543 11111122222233 58887653321 12235556653 2333 2322222 23
Q ss_pred EEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCCcE
Q 016877 166 GMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (381)
Q Consensus 166 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (381)
.+++. ++.||+.-- ....+++||+.+..-
T Consensus 230 giavdp~~g~lyv~d~--------~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 230 GAETHPINGELYFNSW--------NAGQVFRYDFTTQET 260 (430)
T ss_dssp CEEECTTTCCEEEEET--------TTTEEEEEETTTTEE
T ss_pred EEEEeCCCCEEEEEEC--------CCCEEEEEECCCCcE
Confidence 44454 578998731 135699999987754
No 248
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=46.82 E-value=92 Score=26.32 Aligned_cols=108 Identities=10% Similarity=0.103 Sum_probs=51.1
Q ss_pred cceEeecCCCCCeEEccCCCCC--CCCceEEEECC-EEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCC--ccce
Q 016877 90 ATFQDLPAPELKWEKMKAAPVP--RLDGAAIQIKN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM--AHSH 164 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~--r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~--~r~~ 164 (381)
..+..+|..+.+-...-.++.. +....+..-++ .+|+.+..+ ..+.++|+.+.+-...-..+.+. ....
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS------ESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT------TEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC------CeEEEEECCCCCeEeeEEcCCcccccccc
Confidence 3677788776654332222221 11222222344 777776432 35899999887644321121100 0011
Q ss_pred EEEEEe--CCEEEEEcCCCCCCCCC---CcceEEEEECCCCcEE
Q 016877 165 LGMVTD--GRYIYVVTGQYGPQCRG---PTAHTFVLDTETKKWQ 203 (381)
Q Consensus 165 ~~~~~~--~~~iyv~GG~~~~~~~~---~~~~~~~yd~~~~~W~ 203 (381)
..++.. ++.+|+.....+..... ....+.+||+.+.+..
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 123332 44777764210000000 1367999999887653
No 249
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=46.68 E-value=1.6e+02 Score=26.46 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=47.6
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
++.||+.... ...+.++|+.+++-..+..... ....+....++.+|+.... + ...++++|+.+.
T Consensus 141 ~g~lyv~d~~------~~~I~~id~~~g~~~~~~~~~~---~~~ia~~~~g~~l~~~d~~-~------~~~I~~~d~~~~ 204 (409)
T 3hrp_A 141 NNTVLAYQRD------DPRVRLISVDDNKVTTVHPGFK---GGKPAVTKDKQRVYSIGWE-G------THTVYVYMKASG 204 (409)
T ss_dssp TTEEEEEETT------TTEEEEEETTTTEEEEEEETCC---BCBCEECTTSSEEEEEBSS-T------TCEEEEEEGGGT
T ss_pred CCCEEEEecC------CCcEEEEECCCCEEEEeeccCC---CCceeEecCCCcEEEEecC-C------CceEEEEEcCCC
Confidence 5689998752 2358899999877655432221 1112222234567776431 1 126899998754
Q ss_pred c-EEeCCCC-C-CCCcccEEEEE--CCEEEEE
Q 016877 201 K-WQDLPPL-P-VPRYAPATQLW--RGRLHVM 227 (381)
Q Consensus 201 ~-W~~~~~~-p-~~r~~~~~~~~--~~~lyv~ 227 (381)
. ...+... + ....-+.+++. ++.||+.
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEE
Confidence 3 2233111 1 11222333443 6789984
No 250
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=46.53 E-value=1.6e+02 Score=26.28 Aligned_cols=167 Identities=11% Similarity=0.027 Sum_probs=84.4
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--e-ecccccccccCcceEeecCCCCCeEEcc--
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--T-KKDVVPKRILPATFQDLPAPELKWEKMK-- 106 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~W~~l~-- 106 (381)
++.||+.--. .+.+.++++.... ..+.........++++- . .+|... .....+.++++....-+.+.
T Consensus 127 ~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d--~~~~~I~~~~~dg~~~~~l~~~ 199 (386)
T 3v65_B 127 RELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD--SGTSRIEVANLDGAHRKVLLWQ 199 (386)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEE--TTTTEEEECBTTSCSCEEEECS
T ss_pred CCeEEEEeCC-----CCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEc--CCCCeEEEEeCCCCceEEeecC
Confidence 5788887542 2367888887665 33322111122333332 1 122221 12335667666554323322
Q ss_pred CCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE--eCCEEEEEcCCCC
Q 016877 107 AAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT--DGRYIYVVTGQYG 182 (381)
Q Consensus 107 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~ 182 (381)
.+..| .++++- ++.||+.--.. ...++++++....-+.+..-.. ....++++ .+++||+.-.
T Consensus 200 ~l~~P---~giavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~~~---~~PnGlavd~~~~~lY~aD~--- 265 (386)
T 3v65_B 200 SLEKP---RAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADTHL---FWPNGLTIDYAGRRMYWVDA--- 265 (386)
T ss_dssp SCSCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEECSSC---SCEEEEEEEGGGTEEEEEET---
T ss_pred CCCCC---cEEEEEcCCCeEEEeccCC-----CCEEEEEeCCCCCcEEEEECCC---CCeeeEEEeCCCCEEEEEEC---
Confidence 12222 123333 56899874211 2458999987543333221111 12234555 4789999832
Q ss_pred CCCCCCcceEEEEECCCCcEEeC-C-CCCCCCcccEEEEECCEEEEEc
Q 016877 183 PQCRGPTAHTFVLDTETKKWQDL-P-PLPVPRYAPATQLWRGRLHVMG 228 (381)
Q Consensus 183 ~~~~~~~~~~~~yd~~~~~W~~~-~-~~p~~r~~~~~~~~~~~lyv~G 228 (381)
....++++|+....-+.+ . .++. -.++++.++.||+.-
T Consensus 266 -----~~~~I~~~d~dG~~~~~~~~~~~~~---P~giav~~~~ly~td 305 (386)
T 3v65_B 266 -----KHHVIERANLDGSHRKAVISQGLPH---PFAITVFEDSLYWTD 305 (386)
T ss_dssp -----TTTEEEEECTTSCSCEEEECSSCSS---EEEEEEETTEEEEEE
T ss_pred -----CCCEEEEEeCCCCeeEEEEECCCCC---ceEEEEECCEEEEee
Confidence 146799999875332222 2 2222 246667889999984
No 251
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=46.04 E-value=1.7e+02 Score=26.39 Aligned_cols=124 Identities=9% Similarity=0.017 Sum_probs=59.6
Q ss_pred cceEeecCCCCCeEEccCCCCCCCCceEEEE-CCEEEEEecCCCCCCcccceEEEeCCCCe-EecCCCCCCCCccceEEE
Q 016877 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGRFDMPREMAHSHLGM 167 (381)
Q Consensus 90 ~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~r~~~~~ 167 (381)
..+.++|+.+..-..+.... .. .+-+..- ++.||+...... ..++.+|+.++. ...+...+.+.....+++
T Consensus 152 ~~I~~id~~~g~~~~~~~~~-~~-~~ia~~~~g~~l~~~d~~~~-----~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~i 224 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGF-KG-GKPAVTKDKQRVYSIGWEGT-----HTVYVYMKASGWAPTRIGQLGSTFSGKIGAV 224 (409)
T ss_dssp TEEEEEETTTTEEEEEEETC-CB-CBCEECTTSSEEEEEBSSTT-----CEEEEEEGGGTTCEEEEEECCTTSCSCCCBC
T ss_pred CcEEEEECCCCEEEEeeccC-CC-CceeEecCCCcEEEEecCCC-----ceEEEEEcCCCceeEEeeeccchhcCCcEEE
Confidence 45667777665444332221 11 1111122 335666543221 158888887543 223311111001122334
Q ss_pred EEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC---CCCCCCcc-c-EEEEE--CCEEEEEcc
Q 016877 168 VTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP---PLPVPRYA-P-ATQLW--RGRLHVMGG 229 (381)
Q Consensus 168 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~-~-~~~~~--~~~lyv~GG 229 (381)
++. ++.||+.-. ...+++||+++.....+. ........ . .+++. ++.||+...
T Consensus 225 av~p~~g~lyv~d~---------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 225 ALDETEEWLYFVDS---------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EECTTSSEEEEECT---------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeCCCCeEEEEEC---------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 443 688998421 246999999887655541 11111222 1 45554 578998853
No 252
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=45.86 E-value=1.6e+02 Score=25.92 Aligned_cols=169 Identities=9% Similarity=0.003 Sum_probs=86.0
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce-eeecCCCCCCCceeEEe--ee-cccccccccCcceEeecCCCCCeEEcc--
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVK--TK-KDVVPKRILPATFQDLPAPELKWEKMK-- 106 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~~p~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~W~~l~-- 106 (381)
++.||+.--. .+.+.++++.... ..+.........++++- .+ +|... .....+.+++.....-+.+.
T Consensus 84 ~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d--~~~~~I~~~~~dG~~~~~l~~~ 156 (349)
T 3v64_C 84 RELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD--SGTSRIEVANLDGAHRKVLLWQ 156 (349)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECT
T ss_pred ccEEEEEecc-----CCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEc--CCCCeEEEEcCCCCceEEEEeC
Confidence 5788887542 2367888887665 33322111122344432 11 22221 12335667766554333332
Q ss_pred CCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE--eCCEEEEEcCCCC
Q 016877 107 AAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT--DGRYIYVVTGQYG 182 (381)
Q Consensus 107 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~ 182 (381)
.+..|+ ++++- ++.||+.--.. ...++++++....-+.+..-.. ....++++ .+++||+.-.
T Consensus 157 ~l~~P~---~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~~~---~~PnGla~d~~~~~lY~aD~--- 222 (349)
T 3v64_C 157 SLEKPR---AIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADTHL---FWPNGLTIDYAGRRMYWVDA--- 222 (349)
T ss_dssp TCSCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESCCSSC---SCEEEEEEETTTTEEEEEET---
T ss_pred CCCCcc---eEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEEECCC---CCcceEEEeCCCCEEEEEEC---
Confidence 222222 23333 57899875221 2458999987654443322111 22344555 4789999832
Q ss_pred CCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEEECCEEEEEc
Q 016877 183 PQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMG 228 (381)
Q Consensus 183 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~G 228 (381)
....++++|+....-+.+..... ..-.++++.++.||+.-
T Consensus 223 -----~~~~I~~~~~dG~~~~~~~~~~~-~~P~giav~~~~ly~td 262 (349)
T 3v64_C 223 -----KHHVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTD 262 (349)
T ss_dssp -----TTTEEEEEETTSCSCEEEECSSC-SSEEEEEEETTEEEEEE
T ss_pred -----CCCEEEEEeCCCCceEEEEeCCC-CCceEEEEECCEEEEec
Confidence 14679999987543222211111 12245666899999984
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=45.34 E-value=1.4e+02 Score=25.24 Aligned_cols=110 Identities=14% Similarity=0.169 Sum_probs=53.3
Q ss_pred eEeecCCCC-CeEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCC-CCeEecCCCCCCCCccceEEEEE
Q 016877 92 FQDLPAPEL-KWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFT-DNTWGGRFDMPREMAHSHLGMVT 169 (381)
Q Consensus 92 ~~~~~~~~~-~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~~~r~~~~~~~ 169 (381)
++.||+... .|+... +... ....+..++.||+... + ..+++||+. ...|+...+.+. ..+.+.
T Consensus 80 l~~~d~~g~~~~~~~~--~~~~-~~~~~~~~~~l~v~t~-~------~~l~~~d~~g~~~~~~~~~~~~-----~~~~~~ 144 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDT--KKAI-VSDFTIFEDILYVTSM-D------GHLYAINTDGTEKWRFKTKKAI-----YATPIV 144 (330)
T ss_dssp EEEECCCGGGGGGSCC--------CCEEEETTEEEEECT-T------SEEEEECTTSCEEEEEECSSCC-----CSCCEE
T ss_pred EEEECCCCcEEEEEEC--CCCc-ccCceEECCEEEEEec-C------CEEEEEcCCCCEEEEEcCCCce-----eeeeEE
Confidence 778886433 353221 1111 1122334888887432 1 348889987 335765432211 112233
Q ss_pred e-CCEEEEEcCCCCCCCCCCcceEEEEECCC-CcEEeCCCCCCCCcccEEEE-ECCEEEEEc
Q 016877 170 D-GRYIYVVTGQYGPQCRGPTAHTFVLDTET-KKWQDLPPLPVPRYAPATQL-WRGRLHVMG 228 (381)
Q Consensus 170 ~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~-~~~~lyv~G 228 (381)
. ++.||+... ...+++||++. ..|+...+ .... .+.+. .++.||+..
T Consensus 145 ~~~g~l~vgt~---------~~~l~~~d~~g~~~~~~~~~--~~~~-~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 145 SEDGTIYVGSN---------DNYLYAINPDGTEKWRFKTN--DAIT-SAASIGKDGTIYFGS 194 (330)
T ss_dssp CTTSCEEEECT---------TSEEEEECTTSCEEEEEECS--SCCC-SCCEECTTCCEEEES
T ss_pred cCCCEEEEEcC---------CCEEEEECCCCCEeEEEecC--CCce-eeeEEcCCCEEEEEe
Confidence 3 677776421 24588999872 23655322 1111 22233 366777664
No 254
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=44.93 E-value=2.5e+02 Score=28.12 Aligned_cols=86 Identities=17% Similarity=0.087 Sum_probs=46.6
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCC----eEec-CC-CCCCCCccceEEEEE--eCCEEEEEcCCCCCCCCCCcceE
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN----TWGG-RF-DMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHT 192 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~-~~-~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~ 192 (381)
+++||+.-... ..++++++... .... +. .+..| .++++ .+++||+.-. ....+
T Consensus 435 ~~~lY~sD~~~------~~I~~~~l~g~~~~~~~~~vi~~~l~~P-----~GLAvD~~~~~LY~tD~--------~~~~I 495 (791)
T 3m0c_C 435 SNRIYWSDLSQ------RMICSTQLDRAHGVSSYDTVISRDIQAP-----DGLAVDWIHSNIYWTDS--------VLGTV 495 (791)
T ss_dssp TTEEEEEETTT------TEEEEEEC--------CEEEECSSCSCC-----CEEEEETTTTEEEEEET--------TTTEE
T ss_pred CCeeEEeeccc------eeEEEEeccCCCCCcceeEEEecCCCCc-----ceeeeeecCCcEEEEec--------CCCeE
Confidence 56888875421 34777777642 2222 22 22222 23444 4779999842 14679
Q ss_pred EEEECCCCcEEeCC--CCCCCCcccEEEE--ECCEEEEEc
Q 016877 193 FVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (381)
Q Consensus 193 ~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~lyv~G 228 (381)
+++++....-+.+. .+..|+ .+++ .++.||+.-
T Consensus 496 ~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 496 SVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTD 532 (791)
T ss_dssp EEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEE
T ss_pred EEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEec
Confidence 99999876554442 333332 3444 257899874
No 255
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=44.18 E-value=1.2e+02 Score=24.27 Aligned_cols=92 Identities=12% Similarity=0.138 Sum_probs=48.9
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeE-ecCCC--CCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEEC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTW-GGRFD--MPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~--~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (381)
++++|+|-|. ..|+|+..+-.- +.+.. +|....+-..++...++++|+|-| +..|+||.
T Consensus 64 ~~~~yfFkG~--------~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg----------~~ywr~d~ 125 (195)
T 1itv_A 64 SKKLFFFSGR--------QVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG----------RRLWRFDV 125 (195)
T ss_dssp TCCEEEEETT--------EEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET----------TEEEEEET
T ss_pred CCeEEEEeCC--------EEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC----------CEEEEEeC
Confidence 5688888772 366676432110 11211 222111223333334689999965 56899998
Q ss_pred CCCcEEe-----CC-CC-CCCCcccEEEEECCEEEEEccC
Q 016877 198 ETKKWQD-----LP-PL-PVPRYAPATQLWRGRLHVMGGS 230 (381)
Q Consensus 198 ~~~~W~~-----~~-~~-p~~r~~~~~~~~~~~lyv~GG~ 230 (381)
.+++=.. +. .- ..|..-.++...++.+|++-|.
T Consensus 126 ~~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 126 KAQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQDR 165 (195)
T ss_dssp TTTEECGGGCEEHHHHSTTSCSSCSEEEEETTEEEEEETT
T ss_pred CcccccCCCccChhhcCCCCCCCCCEEEEeCCeEEEEeCC
Confidence 8754211 10 01 1122344566678999999764
No 256
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=43.91 E-value=1.5e+02 Score=25.36 Aligned_cols=166 Identities=11% Similarity=0.028 Sum_probs=81.3
Q ss_pred ceeeeeeCCCce-ee-ecCCCCCCCceeEEe--eecccccccccCcceEeecCCCC--CeEEccCC------CCCCCCc-
Q 016877 49 NIASNWSPYHNS-II-LPNNGPQKGENIGVK--TKKDVVPKRILPATFQDLPAPEL--KWEKMKAA------PVPRLDG- 115 (381)
Q Consensus 49 ~~~~~~d~~~~~-~~-~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~W~~l~~~------p~~r~~~- 115 (381)
+.+..+|+.+++ .. .....-....+++.. +.++... .....+..+++... .-..+... .......
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d--~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTD--VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEE--TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEE--CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc
Confidence 368889998777 32 221111222333332 1222221 22346788887654 22222211 1111122
Q ss_pred eEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCC-------CCCCccceEEEEEe-C-CEEEEEcCCCCCC
Q 016877 116 AAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDM-------PREMAHSHLGMVTD-G-RYIYVVTGQYGPQ 184 (381)
Q Consensus 116 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-------~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~ 184 (381)
.++.. ++.|||..+.. ...+.+||+....-..+... +.. .....++++. + +.||+....
T Consensus 147 ~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~-~~~p~gia~d~~~g~l~v~d~~---- 216 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQ-FSVPHSLALVPHLDQLCVADRE---- 216 (329)
T ss_dssp EEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTE-ESCEEEEEEETTTTEEEEEETT----
T ss_pred EEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcc-cCCCcEEEEECCCCEEEEEECC----
Confidence 23333 57899987521 23588898655443333211 111 1223455554 3 799998532
Q ss_pred CCCCcceEEEEECCCCcEEeC-CCCCCCCcccEEEEECCEEEEEccC
Q 016877 185 CRGPTAHTFVLDTETKKWQDL-PPLPVPRYAPATQLWRGRLHVMGGS 230 (381)
Q Consensus 185 ~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~lyv~GG~ 230 (381)
...+.+||+++.+.... ........-.+++...+.+|+..|.
T Consensus 217 ----~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 217 ----NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp ----TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC
T ss_pred ----CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC
Confidence 35699999986665432 2112222223444455777777664
No 257
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=43.22 E-value=1.5e+02 Score=28.75 Aligned_cols=65 Identities=6% Similarity=-0.219 Sum_probs=33.9
Q ss_pred ceEeecCCCCCeEEccCCCCC---CCCceEEEECCEEEEEecCCCCC---CcccceEEEeCCCCeEecCCC
Q 016877 91 TFQDLPAPELKWEKMKAAPVP---RLDGAAIQIKNLLYVFAGYGSID---YVHSHVDIYNFTDNTWGGRFD 155 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~---r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~~yd~~~~~W~~~~~ 155 (381)
.+..+|..+.+-..+...... +....+..-+++.++++..+... .....++++|..+.+-+.+..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 108 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP 108 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC
Confidence 577777777654443322111 11112223356655565443221 123569999999887655543
No 258
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=42.93 E-value=1.2e+02 Score=25.84 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=52.0
Q ss_pred cceEeecCCCCCe-EEccCCCCCCCCceEEEECCEEEEEecCCCCCC--c-ccceEEEeCCCCeEecCCCCCCCCccceE
Q 016877 90 ATFQDLPAPELKW-EKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDY--V-HSHVDIYNFTDNTWGGRFDMPREMAHSHL 165 (381)
Q Consensus 90 ~~~~~~~~~~~~W-~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--~-~~~~~~yd~~~~~W~~~~~~~~~~~r~~~ 165 (381)
..++.+|..+.+. ..+.. + .........+.+++.+..+.... . ...++.+| +.+++.+..- . . ..
T Consensus 152 ~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~---~-~~ 220 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-V---S-FY 220 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-E---S-EE
T ss_pred ceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC-c---c-ee
Confidence 3577788877766 55554 2 22333333333555554432211 1 34688888 6777765432 1 1 12
Q ss_pred EEEEeCC-EEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC
Q 016877 166 GMVTDGR-YIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (381)
Q Consensus 166 ~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (381)
.. .-++ .|++.+...... ......++.+| +.+++.+..
T Consensus 221 ~~-spdg~~l~~~~~~~~~~-~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 221 AV-DSDGERILLYGKPEKKY-MSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp EE-EECSSCEEEEECCSSSC-CCSSCEEEEEC--SSCEEESST
T ss_pred eE-CCCCCEEEEEEccccCC-ccccceEEEEC--CCceEeccc
Confidence 22 4444 454444322111 11246799999 666766643
No 259
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=39.89 E-value=85 Score=26.78 Aligned_cols=67 Identities=15% Similarity=0.214 Sum_probs=40.1
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (381)
++++|+.++.+ ..++++|+.+++....-+.+.. .....++.. ++.+|+.+.. ...+++||+.
T Consensus 10 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~~~v~~~~--------~~~i~~~d~~ 73 (349)
T 1jmx_B 10 GHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPDK--FGPGTAMMAPDNRTAYVLNNH--------YGDIYGIDLD 73 (349)
T ss_dssp TCEEEEEEETT------TEEEEEETTTTEEEEEEECSSC--CSSCEEEECTTSSEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEeCCC------CeEEEEECCCCcEEEEEecCCC--CCCceeEECCCCCEEEEEeCC--------CCcEEEEeCC
Confidence 56788887653 4589999998876543222220 011223332 3468877532 3568999998
Q ss_pred CCcEE
Q 016877 199 TKKWQ 203 (381)
Q Consensus 199 ~~~W~ 203 (381)
+.+-.
T Consensus 74 t~~~~ 78 (349)
T 1jmx_B 74 TCKNT 78 (349)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 87654
No 260
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=39.09 E-value=1.6e+02 Score=24.20 Aligned_cols=50 Identities=16% Similarity=0.198 Sum_probs=31.2
Q ss_pred eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC-----CCCC------CCcccEEEE--ECCEEEEEcc
Q 016877 170 DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP-----PLPV------PRYAPATQL--WRGRLHVMGG 229 (381)
Q Consensus 170 ~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~-----~~p~------~r~~~~~~~--~~~~lyv~GG 229 (381)
.++++|+|-| +..|+||..+++...-| ..|. +..--++.. .++++|+|-|
T Consensus 126 ~~gk~yfFkG----------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG 188 (225)
T 3oyo_A 126 KGKEVYLFKG----------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG 188 (225)
T ss_dssp STTEEEEEET----------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET
T ss_pred CCCcEEEEeC----------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC
Confidence 3689999976 56899997776554311 1221 223334444 3789999976
No 261
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=38.16 E-value=96 Score=28.36 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCCCCCcccEEEE-EC-CEEEEEcc
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WR-GRLHVMGG 229 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~-~~lyv~GG 229 (381)
++.||+.-- ...+.++|+++.+.+.+.. ...+- ..+++ .+ +.||+...
T Consensus 149 ~g~Lyv~d~---------~~~I~~id~~~~~v~~~~~-~~~~P-~~ia~d~~G~~lyvad~ 198 (430)
T 3tc9_A 149 HNHLYLVGE---------QHPTRLIDFEKEYVSTVYS-GLSKV-RTICWTHEADSMIITND 198 (430)
T ss_dssp EEEEEEEEB---------TEEEEEEETTTTEEEEEEC-CCSCE-EEEEECTTSSEEEEEEC
T ss_pred CCeEEEEeC---------CCcEEEEECCCCEEEEEec-CCCCc-ceEEEeCCCCEEEEEeC
Confidence 578998732 1678999999988777643 11111 12222 23 45888864
No 262
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=37.23 E-value=3.3e+02 Score=27.18 Aligned_cols=231 Identities=12% Similarity=0.145 Sum_probs=111.2
Q ss_pred CCCeEEccCCCCCCCCceEEEE---CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCC---CccceEEEEEeC-
Q 016877 99 ELKWEKMKAAPVPRLDGAAIQI---KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPRE---MAHSHLGMVTDG- 171 (381)
Q Consensus 99 ~~~W~~l~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~---~~r~~~~~~~~~- 171 (381)
..+|+.+.+....| -.+++.. .+.+|+ |+.. .-+++-+-.-.+|+.+...+.+ ..+.-.++++..
T Consensus 3 ~~~W~~~~~~~~g~-i~~i~~~p~~~~~~~a-~~~~------ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~ 74 (789)
T 1sqj_A 3 HYEFKNVAIGGGGY-ITGIVAHPKTKDLLYA-RTDI------GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPN 74 (789)
T ss_dssp -CEEEECCCCBCSC-EEEEEECSSSTTCEEE-EESS------SCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETT
T ss_pred cccceEccCCCCCc-EEEEEECCCCCCEEEE-EecC------CCEEEecCCCCCeeECccCCCcccccCCceeEEEECCC
Confidence 35798887632222 2233332 235655 4322 1366666677899998653321 012334455542
Q ss_pred --CEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC-CC-----CCC-cccEEEEE---CCEEEEEccCCCCCCCCCc
Q 016877 172 --RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP-LP-----VPR-YAPATQLW---RGRLHVMGGSGENRYTPEV 239 (381)
Q Consensus 172 --~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p-----~~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~ 239 (381)
+.+|+..|..... ....+++=+-.-.+|+++.. ++ ..| ..+.+++. .+.+|+. ... .
T Consensus 75 ~~~~i~~~~g~~~~~---~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~-------~ 143 (789)
T 1sqj_A 75 NPDRLYLAQGRYVGD---EWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRT-------E 143 (789)
T ss_dssp EEEEEEEEECSCTTS---SCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSS-------S
T ss_pred CCCEEEEEeCccCCC---cccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEE-ecc-------C
Confidence 5688876632211 01345555555678998752 11 112 22345554 3456663 211 1
Q ss_pred cceEeeeecCCccCCceEEecCCCC---CCcceeEEEe----CCEEEEEccCCCCCCCCCCCCccccccCceeecCceeE
Q 016877 240 DHWSLAVKDGKPLEKEWRTEIPIPR---GGPHRACVVV----DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYM 312 (381)
Q Consensus 240 ~~~~~~~~~~~~~~~~W~~~~~~p~---~~~~~~~~~~----~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (381)
..|.- +..-.+|+.+..+|. .......+.+ .+.||+...... .+|.
T Consensus 144 gl~~S-----~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~----------------------~v~~ 196 (789)
T 1sqj_A 144 GIWKS-----SDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQ----------------------GMYV 196 (789)
T ss_dssp CEEEE-----SSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTT----------------------CEEE
T ss_pred CEEEE-----CCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCC----------------------eEEE
Confidence 23332 134568998765441 1122233333 245666443211 2555
Q ss_pred eC-CCCCeEEcCCCCCCC-------C-------CcceEEEE-E-CCEEEEEcccccccCCceeeeeecceEEEEcCCCce
Q 016877 313 LD-DEMKWKVLPSMPKPD-------S-------HIEFAWVL-V-NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVA 375 (381)
Q Consensus 313 yd-~~~~W~~i~~~~~~~-------~-------~~~~~~~~-~-~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W 375 (381)
=. ...+|+.+..++... . ...+.+++ . ++.||+..+........ -...+++.+-...+|
T Consensus 197 S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g----~~g~l~~S~DgG~tW 272 (789)
T 1sqj_A 197 THDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGV----TFGEVWRQNRTSGAW 272 (789)
T ss_dssp ESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCC----CCCCEEEEETTTCCE
T ss_pred EcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCC----CCceEEEEeCCCCce
Confidence 43 567899987544321 0 00022222 2 78898884321100000 012478878777888
Q ss_pred EEee
Q 016877 376 VLNA 379 (381)
Q Consensus 376 ~~i~ 379 (381)
+.+.
T Consensus 273 ~~~~ 276 (789)
T 1sqj_A 273 DDIT 276 (789)
T ss_dssp EECC
T ss_pred EECc
Confidence 8765
No 263
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=36.14 E-value=1.8e+02 Score=23.80 Aligned_cols=90 Identities=17% Similarity=0.221 Sum_probs=47.9
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEe-----cCCC--CCCCCccceEEEEE-eCCEEEEEcCCCCCCCCCCcceE
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG-----GRFD--MPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHT 192 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-----~~~~--~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~ 192 (381)
++++|+|-| +..|+||.. +-. .+.. +|....+-..+... .++++|+|-| +..
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~--~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG----------~~y 146 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSAS--TLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG----------DKF 146 (218)
T ss_dssp TTEEEEEET--------TEEEEEETT--EECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET----------TEE
T ss_pred CCEEEEEeC--------CEEEEEcCc--cccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC----------CEE
Confidence 579999976 347888742 111 1111 22111122222222 4689999965 568
Q ss_pred EEEECCCCcEEeC-----C-C-CCCCCcccEEEEEC--CEEEEEccC
Q 016877 193 FVLDTETKKWQDL-----P-P-LPVPRYAPATQLWR--GRLHVMGGS 230 (381)
Q Consensus 193 ~~yd~~~~~W~~~-----~-~-~p~~r~~~~~~~~~--~~lyv~GG~ 230 (381)
|+||..+++-... . . +..+..-.++...+ +++|+|-|.
T Consensus 147 wr~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 147 WRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp EEEETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEETT
T ss_pred EEEECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEECC
Confidence 9999887642211 0 0 11223334555544 899999663
No 264
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=35.50 E-value=3.3e+02 Score=26.79 Aligned_cols=237 Identities=17% Similarity=0.210 Sum_probs=114.7
Q ss_pred CCCeEEccCCCCCCCCceEEEE--C-CEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCC---ccceEEEEEe--
Q 016877 99 ELKWEKMKAAPVPRLDGAAIQI--K-NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM---AHSHLGMVTD-- 170 (381)
Q Consensus 99 ~~~W~~l~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~---~r~~~~~~~~-- 170 (381)
..+|+.+.+-...-.-.++++. + +.||+.. .. ..+++.+-...+|+.+.+.+... ...-.++++.
T Consensus 10 ~~~w~~~~~~~~~g~i~~i~~~p~~~~~~~~~~-~~------ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~ 82 (737)
T 2cn3_A 10 PYKWDNVVIGGGGGFMPGIVFNETEKDLIYARA-AI------GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPV 82 (737)
T ss_dssp CEEEEEECCCSBCSCCCEEEECSSSTTCEEEEC-SS------SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSS
T ss_pred CCeeEEcccCCCcceeeEEEECCCCCCEEEEEe-cC------CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCC
Confidence 4579888754333122333332 2 4677633 11 24888888889999986643210 0112344443
Q ss_pred -CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC-CCC-----CC-cccEEEEE---CCEEEEEccCCCCCCCCCc
Q 016877 171 -GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP-LPV-----PR-YAPATQLW---RGRLHVMGGSGENRYTPEV 239 (381)
Q Consensus 171 -~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~-----~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~ 239 (381)
.+.||+..|............+++=+-.-.+|+.+.. .+. .+ ..+.+++. .+.||+.... + .
T Consensus 83 ~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~-g------~ 155 (737)
T 2cn3_A 83 DPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC-G------N 155 (737)
T ss_dssp STTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST-T------C
T ss_pred CCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc-C------C
Confidence 3679987653111000001345554445678988752 111 11 22444442 2566664311 0 1
Q ss_pred cceEeeeecCCccCCceEEecCCCCCCc--------------ceeEEEeC----------CEEEEEccCCCCCCCCCCCC
Q 016877 240 DHWSLAVKDGKPLEKEWRTEIPIPRGGP--------------HRACVVVD----------DRLLVIGGQEGDFMAKPGSP 295 (381)
Q Consensus 240 ~~~~~~~~~~~~~~~~W~~~~~~p~~~~--------------~~~~~~~~----------~~l~v~GG~~~~~~~~~~~~ 295 (381)
..|.- +..-.+|+.+..+|.... +...+.++ +.||+.-... .
T Consensus 156 gl~~S-----~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~-~-------- 221 (737)
T 2cn3_A 156 GLWRS-----TDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADK-N-------- 221 (737)
T ss_dssp CEEEE-----SSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCS-S--------
T ss_pred cEEEe-----CCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCC-C--------
Confidence 22322 123457887765543211 11223332 2555532111 0
Q ss_pred ccccccCceeecCceeEeC-CCCCeEEcCCCCCCCCCcceEEEEE-CCEEEEEcccccccCCceeeeeecceEEEEcCCC
Q 016877 296 IFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLV-NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTL 373 (381)
Q Consensus 296 ~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 373 (381)
..+|+=. ...+|+.+..+|... ..+.+++. ++.||+..+......... -...+++++-...
T Consensus 222 ------------~~v~~S~DgG~tW~~~~~~p~~~--~~~~~~~~~~~~l~~~~~d~~g~y~~~---~~g~v~~s~d~G~ 284 (737)
T 2cn3_A 222 ------------ESIYRSTDGGVTWKAVPGQPKGL--LPHHGVLASNGMLYITYGDTCGPYDGN---GKGQVWKFNTRTG 284 (737)
T ss_dssp ------------CCEEEESSTTSCCEECTTCCCSS--EEEEEEECTTSEEEEEEESSCCSSCCS---CCEEEEEEETTTC
T ss_pred ------------ccEEEEcCCCCceEECCCCCCcc--cceEEEECCCCeEEEEecCCCCccccc---cCceEEEEeCCCC
Confidence 1155543 577899998665432 22222222 688888754321100000 1135899999999
Q ss_pred ceEEeec
Q 016877 374 VAVLNAM 380 (381)
Q Consensus 374 ~W~~i~~ 380 (381)
+|+.+..
T Consensus 285 tW~~i~~ 291 (737)
T 2cn3_A 285 EWIDITP 291 (737)
T ss_dssp CEEECCS
T ss_pred CEEEccC
Confidence 9998753
No 265
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=35.31 E-value=1.9e+02 Score=23.96 Aligned_cols=58 Identities=5% Similarity=-0.028 Sum_probs=35.0
Q ss_pred CcceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEec
Q 016877 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG 152 (381)
Q Consensus 89 ~~~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 152 (381)
...+..+|..+.+..++-.+......-.++.+ +++.++.|+.++ .+.++|.++++-..
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg------~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLR 103 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC------cEEEeecCCceeEE
Confidence 34678888888776554433333322223333 557778887653 47788988876433
No 266
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=34.88 E-value=1.8e+02 Score=24.64 Aligned_cols=17 Identities=6% Similarity=0.020 Sum_probs=12.5
Q ss_pred eEEEEEeCCEEEEEcCC
Q 016877 164 HLGMVTDGRYIYVVTGQ 180 (381)
Q Consensus 164 ~~~~~~~~~~iyv~GG~ 180 (381)
.|++++.++++|.+|-.
T Consensus 73 ~hs~~l~~G~v~~wG~n 89 (282)
T 3qhy_B 73 YHSLALKDGEVIAWGGN 89 (282)
T ss_dssp SEEEEEETTEEEEEECC
T ss_pred CEEEEEECCEEEEeeCC
Confidence 45565569999999853
No 267
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=34.23 E-value=3.3e+02 Score=26.40 Aligned_cols=81 Identities=14% Similarity=0.159 Sum_probs=48.1
Q ss_pred cceEEEeCCCC--eEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC---cEEeCCCCCCCC
Q 016877 138 SHVDIYNFTDN--TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK---KWQDLPPLPVPR 212 (381)
Q Consensus 138 ~~~~~yd~~~~--~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r 212 (381)
++++++|..+. .|..+..-.. .........+++||+....+.. ...++..|+.+. .|+.+.+-....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~---~~~~~~~~~g~~l~~~t~~~~~-----~~~l~~~d~~~~~~~~~~~l~~~~~~~ 330 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLD---ADVSLVDNKGSTLYLLTNRDAP-----NRRLVTVDAANPGPAHWRDLIPERQQV 330 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSS---SCEEEEEEETTEEEEEECTTCT-----TCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred cEEEEEECCCCCCceEEEeCCCC---ceEEEEeccCCEEEEEECCCCC-----CCEEEEEeCCCCCccccEEEecCCCCE
Confidence 57999998765 6777643222 1122244578899998764332 356899998763 487754332222
Q ss_pred cccEEEEECCEEEEEc
Q 016877 213 YAPATQLWRGRLHVMG 228 (381)
Q Consensus 213 ~~~~~~~~~~~lyv~G 228 (381)
. .....++.|++..
T Consensus 331 -~-~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 331 -L-TVHSGSGYLFAEY 344 (693)
T ss_dssp -E-EEEEETTEEEEEE
T ss_pred -E-EEEEECCEEEEEE
Confidence 2 4445666666553
No 268
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=33.77 E-value=1.8e+02 Score=23.24 Aligned_cols=62 Identities=11% Similarity=0.126 Sum_probs=37.0
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEec-----CCCC-CCCCccceEEEEEeCC-EEEEEcCCCCCCCCCCcceEE
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-----RFDM-PREMAHSHLGMVTDGR-YIYVVTGQYGPQCRGPTAHTF 193 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-----~~~~-~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~ 193 (381)
++++|+|-|. ..|+||..+++-.. +... ..| ..-..+....++ ++|+|-| +..+
T Consensus 109 ~g~~yfFkG~--------~yw~yd~~~~~v~~gyPk~i~~~~gip-~~idaAf~~~~~~~~YfFkg----------~~y~ 169 (196)
T 3c7x_A 109 NGKTYFFRGN--------KYYRFNEELRAVDSEYPKNIKVWEGIP-ESPRGSFMGSDEVFTYFYKG----------NKYW 169 (196)
T ss_dssp TTEEEEEETT--------EEEEEETTTTEECTTCSEEGGGSBTCC-SSCSEEEECTTSSEEEEEET----------TEEE
T ss_pred CCEEEEEECC--------EEEEEeCCcccccCCCCccHHHCCCcC-CCcceeEEecCCCEEEEEEC----------CEEE
Confidence 5799999763 47889987764332 1111 111 111222333344 8999965 5689
Q ss_pred EEECCCCc
Q 016877 194 VLDTETKK 201 (381)
Q Consensus 194 ~yd~~~~~ 201 (381)
+||..+.+
T Consensus 170 r~d~~~~~ 177 (196)
T 3c7x_A 170 KFNNQKLK 177 (196)
T ss_dssp EEETTTTE
T ss_pred EEECCcce
Confidence 99998764
No 269
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=33.76 E-value=2.2e+02 Score=24.14 Aligned_cols=20 Identities=15% Similarity=-0.026 Sum_probs=16.5
Q ss_pred HHHHHhhheeEcCEEEEecC
Q 016877 22 IFVMILGFALVADFFWASSS 41 (381)
Q Consensus 22 ~~~~~~~~~~~~~~ly~~GG 41 (381)
+|-..|.+++-++.+|..|-
T Consensus 30 a~G~~h~~~l~~G~v~~wG~ 49 (282)
T 3qhy_B 30 AGGYFHGLALKGGKVLGWGA 49 (282)
T ss_dssp EECSSEEEEEETTEEEEEEC
T ss_pred EeCCCeEEEEECCEEEEEeC
Confidence 45667888888999999985
No 270
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=33.75 E-value=2.8e+02 Score=25.35 Aligned_cols=112 Identities=8% Similarity=-0.070 Sum_probs=59.1
Q ss_pred EcCEEEEecCCCCCcccceeeeeeCCCce--eeecC-CCCCCCceeEEeee-cccccc-------cccCcceEeecCCCC
Q 016877 32 VADFFWASSSKFTSSYLNIASNWSPYHNS--IILPN-NGPQKGENIGVKTK-KDVVPK-------RILPATFQDLPAPEL 100 (381)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~-~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~ 100 (381)
-.+.+|+.-....... +.+..+|+.+++ ..+|. ..| ...+..-++ .|.... ......+..+|+.+.
T Consensus 83 ~~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 83 DARRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CTTEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 3467898876332212 799999999999 55554 222 222221122 222211 012346889999988
Q ss_pred CeEEccCCC-CCC------CCceEEEEC-CEEEEEecCCCCCCcccceEEEeCCCCeEe
Q 016877 101 KWEKMKAAP-VPR------LDGAAIQIK-NLLYVFAGYGSIDYVHSHVDIYNFTDNTWG 151 (381)
Q Consensus 101 ~W~~l~~~p-~~r------~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 151 (381)
+-..--+++ .+| -+.....-+ .++||..-. ..+.+.++|+.+++=.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-----~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-----PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-----SSCEEEEEETTTTEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-----CCCeEEEEECCCCeEE
Confidence 643322232 112 122233333 478886421 1246899999987643
No 271
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=33.55 E-value=67 Score=29.12 Aligned_cols=72 Identities=10% Similarity=0.159 Sum_probs=42.5
Q ss_pred CCEEEEEecC---CCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEE-eCC--EEEEEcCCCCCCCCCCcceEEE
Q 016877 121 KNLLYVFAGY---GSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGR--YIYVVTGQYGPQCRGPTAHTFV 194 (381)
Q Consensus 121 ~~~iyv~GG~---~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~~~~ 194 (381)
++++||.-+. ...+...++++++|+++.+-..--+++. +. .++++ -++ .+|+.-+. .+++..
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~---~~-~~lavs~D~~~~ly~tn~~--------~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH---EI-DSINVSQDEKPLLYALSTG--------DKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EE-CEEEECSSSSCEEEEEETT--------TTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC---Cc-ceEEECCCCCeEEEEEcCC--------CCeEEE
Confidence 4699997432 2222334679999999876554222222 22 23433 443 47775431 477999
Q ss_pred EECCCCcEEe
Q 016877 195 LDTETKKWQD 204 (381)
Q Consensus 195 yd~~~~~W~~ 204 (381)
||..+.+-..
T Consensus 359 iD~~t~k~~~ 368 (386)
T 3sjl_D 359 HDAESGEELR 368 (386)
T ss_dssp EETTTCCEEE
T ss_pred EECCCCcEEE
Confidence 9999887533
No 272
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=33.14 E-value=3.6e+02 Score=26.52 Aligned_cols=82 Identities=20% Similarity=0.309 Sum_probs=49.1
Q ss_pred CCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCC-CcceEEEEECCCCcEEeCCCCCCC----CcccEEEEE
Q 016877 147 DNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRG-PTAHTFVLDTETKKWQDLPPLPVP----RYAPATQLW 220 (381)
Q Consensus 147 ~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~ 220 (381)
-.+|+.+..+|.. ...+..+.. ++.+|+..+........ ....+++++-...+|+.+.+.|.. ++..+...+
T Consensus 231 G~tW~~~~~~p~~--~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v 308 (737)
T 2cn3_A 231 GVTWKAVPGQPKG--LLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAV 308 (737)
T ss_dssp TSCCEECTTCCCS--SEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEE
T ss_pred CCceEECCCCCCc--ccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEE
Confidence 4679999866652 222333333 78899875422110001 246799999999999999876642 333433333
Q ss_pred ----CCEEEEEccC
Q 016877 221 ----RGRLHVMGGS 230 (381)
Q Consensus 221 ----~~~lyv~GG~ 230 (381)
.+.||+.+..
T Consensus 309 ~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 309 DRQNPDIIMVTSMN 322 (737)
T ss_dssp CTTCTTCEEEEEEC
T ss_pred cCCCCCEEEEEecc
Confidence 3578887653
No 273
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=32.95 E-value=2e+02 Score=28.38 Aligned_cols=91 Identities=15% Similarity=0.126 Sum_probs=44.3
Q ss_pred cceEEEEECCC--CcEEeCCCCCCCCcccEEEEECCEEEEEccCCCCCCCCCccceEeeeecCCc-c-----CCceEE-e
Q 016877 189 TAHTFVLDTET--KKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKP-L-----EKEWRT-E 259 (381)
Q Consensus 189 ~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~-~-----~~~W~~-~ 259 (381)
.+.++..|... ..|.++ .+|. ...-+...++++|+....+-..-......+.+.+.+++. . ...|+. +
T Consensus 268 ~~~~~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKI-NMPS--DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF 344 (711)
T ss_dssp CEEEEEEECSSSSCEEEEC-CSCT--TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE
T ss_pred ceeEEEEcCCCCCCcceEe-ecCC--cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE
Confidence 47788888663 668777 3332 222245679999998643210000001112222222222 1 357887 4
Q ss_pred cCCCCCCcceeEEEeCCEEEEEcc
Q 016877 260 IPIPRGGPHRACVVVDDRLLVIGG 283 (381)
Q Consensus 260 ~~~p~~~~~~~~~~~~~~l~v~GG 283 (381)
.+-+.. .-..+...++.|++..-
T Consensus 345 ~~~~~~-~l~~~~~~~~~l~~~~~ 367 (711)
T 4hvt_A 345 TPTANE-VFNFISTTKDRVFLATY 367 (711)
T ss_dssp CCCTTE-EEEEEEECSSCEEEEEE
T ss_pred CCCCCC-eEEEEEEECCEEEEEEE
Confidence 443322 22244556777777543
No 274
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=32.44 E-value=2.1e+02 Score=23.41 Aligned_cols=152 Identities=16% Similarity=0.178 Sum_probs=75.2
Q ss_pred ceehhHHHHH---HhhheeEcCEEEEecCCCCCcccceeeeeeCCCce----eeecC---CCCCCCceeEEe----eecc
Q 016877 16 ARVVLSIFVM---ILGFALVADFFWASSSKFTSSYLNIASNWSPYHNS----IILPN---NGPQKGENIGVK----TKKD 81 (381)
Q Consensus 16 ~~~~~~~~~~---~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~----~~~p~---~~~~~~~~~~~~----~~~~ 81 (381)
...++.+|-. +-|++..++.+|+|-| +.+++++..... ..+.. ..| ....++.. +..+
T Consensus 20 ~p~~p~~C~~~~~~DAi~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp-~~IDAA~~~~~~~k~y 91 (218)
T 1gen_A 20 GPVTPEICKQDIVFDGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELP-EKIDAVYEAPQEEKAV 91 (218)
T ss_dssp CCCCCCTTTSCCCCSEEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSC-SCCSEEEEETTTTEEE
T ss_pred CCCCcccCCCCCcEeEEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCC-CCccEEEEECCCCEEE
Confidence 3455677842 7788888999999987 234555443311 11111 111 11222211 1122
Q ss_pred cccccccCcceEeecCCCC--Ce-EEccC--CCCC-CCCceEEE--ECCEEEEEecCCCCCCcccceEEEeCCCCeEecC
Q 016877 82 VVPKRILPATFQDLPAPEL--KW-EKMKA--APVP-RLDGAAIQ--IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR 153 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~--~W-~~l~~--~p~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~ 153 (381)
. ..-+.+++|+..+. .+ +.+.. +|.. ..--++.. .++++|+|-| +..|+||..+++-...
T Consensus 92 f----FkG~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~~v~~g 159 (218)
T 1gen_A 92 F----FAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKKMDPG 159 (218)
T ss_dssp E----EETTEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTTEECSS
T ss_pred E----EeCCEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECccccccCC
Confidence 1 12235667764211 11 12222 2221 11223333 2579999976 3488899877643321
Q ss_pred ---------CCCCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCCc
Q 016877 154 ---------FDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 154 ---------~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (381)
..+|. .-. ++... ++++|+|=| +..|+||..+..
T Consensus 160 yPr~i~~~w~g~p~---~id-aAf~~~~~g~~YfFkg----------~~y~~~~~~~~~ 204 (218)
T 1gen_A 160 FPKLIADAWNAIPD---NLD-AVVDLQGGGHSYFFKG----------AYYLKLENQSLK 204 (218)
T ss_dssp CCEEHHHHSSSCCS---SCS-EEEECTTTCEEEEEET----------TEEEEEETTEEE
T ss_pred CCcchhhccCCCCC---CCC-EEEEEcCCCcEEEEEC----------CEEEEEECCcee
Confidence 11121 222 33333 489999965 567888887654
No 275
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=32.37 E-value=2.7e+02 Score=24.68 Aligned_cols=67 Identities=12% Similarity=0.017 Sum_probs=37.2
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe-CCEEEEEcCCCCCCCCCCcceEEEEECCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (381)
++.+++.|+.+ ..+.+||+.+.+-...-..+. ....-.+++.. ++..++.|+.++ .+..||..+
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg--------~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSP-RHGAVSSICIDEECCVLILGTTRG--------IIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCG-GGCCEEEEEECTTSCEEEEEETTS--------CEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCC-CCCceEEEEECCCCCEEEEEcCCC--------eEEEEEcCC
Confidence 46777777764 358889998765432211110 01112233332 566677776543 378899887
Q ss_pred CcE
Q 016877 200 KKW 202 (381)
Q Consensus 200 ~~W 202 (381)
.+.
T Consensus 246 ~~~ 248 (437)
T 3gre_A 246 NVL 248 (437)
T ss_dssp TEE
T ss_pred ccE
Confidence 654
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=30.98 E-value=2.7e+02 Score=24.32 Aligned_cols=114 Identities=11% Similarity=0.037 Sum_probs=61.7
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCCeEecCC--CCCCCCccceEE
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSHLG 166 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~r~~~~ 166 (381)
.+.++++.....+.+.+ ....-.+++.. ++.||+.--. ...++++++....-+.+. .+..| .+
T Consensus 54 ~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~p-----~g 120 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNVEEVVSTGLESP-----GG 120 (349)
T ss_dssp CEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSCSCC-----CE
T ss_pred ceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEecc------CCceEEEecCCCCceEEEeCCCCCc-----cE
Confidence 45666776666554432 11112233332 5689987422 245888998876554432 22222 23
Q ss_pred EEE--eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC--CCCCCCcccEEEEE--CCEEEEEc
Q 016877 167 MVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQLW--RGRLHVMG 228 (381)
Q Consensus 167 ~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~G 228 (381)
+++ .++.||+.-. ..+.+++++++...-+.+. .+..| ..+++. ++.||+.-
T Consensus 121 lavd~~~g~ly~~d~--------~~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td 177 (349)
T 3v64_C 121 LAVDWVHDKLYWTDS--------GTSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTD 177 (349)
T ss_dssp EEEETTTTEEEEEET--------TTTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEE
T ss_pred EEEecCCCeEEEEcC--------CCCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEec
Confidence 444 4789998742 1357889998765433321 23333 233443 67888874
No 277
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=30.94 E-value=2.8e+02 Score=24.52 Aligned_cols=61 Identities=10% Similarity=0.170 Sum_probs=31.7
Q ss_pred CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCCCC-CCCcccEEEEE-CCEEEEEccCCCCCCCCCccceEe
Q 016877 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP-VPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSL 244 (381)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 244 (381)
++.+++.|+.+ ..+..||..+.+-...-..+ ....-.+++.. ++++++.|+.++ .+..|++
T Consensus 181 ~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~ 243 (437)
T 3gre_A 181 EKSLLVALTNL--------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDI 243 (437)
T ss_dssp SCEEEEEEETT--------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeCC--------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEc
Confidence 46677777643 35888999876532211111 11122222222 567777777553 3556653
No 278
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=29.82 E-value=37 Score=28.27 Aligned_cols=62 Identities=10% Similarity=0.123 Sum_probs=36.5
Q ss_pred EECCEEEEEecCCCCCCcccceEEEe--CC-------------CCeEecCCCC--CCCCccceEEEEE-eCCEEEEEcCC
Q 016877 119 QIKNLLYVFAGYGSIDYVHSHVDIYN--FT-------------DNTWGGRFDM--PREMAHSHLGMVT-DGRYIYVVTGQ 180 (381)
Q Consensus 119 ~~~~~iyv~GG~~~~~~~~~~~~~yd--~~-------------~~~W~~~~~~--~~~~~r~~~~~~~-~~~~iyv~GG~ 180 (381)
..++++|+|-|. .+|+|+ +. +..|..++.- |. .-..+... .++++|+|-|
T Consensus 70 ~~~g~~~fFKg~--------~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~---~IDAA~~~~~~~k~yfFkG- 137 (227)
T 3lp9_A 70 TENNEAFIFYEN--------FCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFES---GIDAAYRSTRGKEVYLFKG- 137 (227)
T ss_dssp CSTTEEEEEETT--------EEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTT---CCSEEEECSSTTEEEEEET-
T ss_pred CCCCEEEEEeCC--------EEEEEeCCCCccccccccCceEHhhhcCCCCCccCCC---cccEEEEECCCCEEEEEEC-
Confidence 367899999873 477777 21 1224444311 22 12222222 3689999966
Q ss_pred CCCCCCCCcceEEEEECCCCc
Q 016877 181 YGPQCRGPTAHTFVLDTETKK 201 (381)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~~~~ 201 (381)
+..|+||..+++
T Consensus 138 ---------~~yw~~d~~~~~ 149 (227)
T 3lp9_A 138 ---------DQYARIDYGSNS 149 (227)
T ss_dssp ---------TEEEEEETTTTE
T ss_pred ---------CEEEEEeCCCcc
Confidence 568999987653
No 279
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=29.46 E-value=4.1e+02 Score=25.95 Aligned_cols=102 Identities=7% Similarity=0.049 Sum_probs=57.5
Q ss_pred ceEeecCCCC--C-eEEccCCCCCCCCceEEEECCEEEEEecCCCCCCcccceEEEeCCC--CeEecCCCCCCCCccceE
Q 016877 91 TFQDLPAPEL--K-WEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTD--NTWGGRFDMPREMAHSHL 165 (381)
Q Consensus 91 ~~~~~~~~~~--~-W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~~~r~~~ 165 (381)
.++..|..+. . |+.+..-..... ..+..-++.||+....+.. ...++.+|+.+ ..|+.+-+-.. ..-.
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~s~~~~~---~~~l~~~d~~~~~~~~~~l~~~~~---~~l~ 367 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQW-DFVDGVGDQLWFVSGDGAP---LKKIVRVDLSGSTPRFDTVVPESK---DNLE 367 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSCE-EEEEEETTEEEEEECTTCT---TCEEEEEECSSSSCEEEEEECCCS---SEEE
T ss_pred eEEEEECCCCCCcccEEecCCCCceE-EEEeccCCEEEEEECCCCC---CCEEEEEeCCCCccccEEEecCCC---CeEE
Confidence 5666666555 5 766653222111 1122346677777644321 23589999887 57988643222 1122
Q ss_pred EEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeC
Q 016877 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL 205 (381)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~ 205 (381)
.+...++++++....++ ...++.+|+....-+.+
T Consensus 368 ~~~~~~~~lv~~~~~dg------~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 368 SVGIAGNRLFASYIHDA------KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEEBTEEEEEEEETT------EEEEEEEETTSCEEEEC
T ss_pred EEEEECCEEEEEEEECC------EEEEEEEeCCCCceeec
Confidence 34455888887765444 46789999765544444
No 280
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=29.43 E-value=1.5e+02 Score=26.39 Aligned_cols=70 Identities=9% Similarity=0.061 Sum_probs=38.5
Q ss_pred CCEEEEEecCCC---CCCcccceEEEeCCCCeEe-cCCCCCCCCccceEEEEE-eC-C-EEEEEcCCCCCCCCCCcceEE
Q 016877 121 KNLLYVFAGYGS---IDYVHSHVDIYNFTDNTWG-GRFDMPREMAHSHLGMVT-DG-R-YIYVVTGQYGPQCRGPTAHTF 193 (381)
Q Consensus 121 ~~~iyv~GG~~~---~~~~~~~~~~yd~~~~~W~-~~~~~~~~~~r~~~~~~~-~~-~-~iyv~GG~~~~~~~~~~~~~~ 193 (381)
++++||...... .....++++++|+.+.+-. .+ +.+. + ..+++. -+ . .+|+.... .+++.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g~---~-p~~i~~s~Dg~~~l~v~~~~--------~~~V~ 344 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGH---D-VDAISVAQDGGPDLYALSAG--------TEVLH 344 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-ECCC---C-cCeEEECCCCCeEEEEEcCC--------CCeEE
Confidence 458898754211 1123467999999877642 23 2222 1 222333 33 4 46654321 36799
Q ss_pred EEECCCCcEE
Q 016877 194 VLDTETKKWQ 203 (381)
Q Consensus 194 ~yd~~~~~W~ 203 (381)
++|.++.+=.
T Consensus 345 ViD~~t~~vv 354 (373)
T 2mad_H 345 IYDAGAGDQD 354 (373)
T ss_pred EEECCCCCEE
Confidence 9999886543
No 281
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=29.42 E-value=1.9e+02 Score=23.83 Aligned_cols=59 Identities=15% Similarity=0.245 Sum_probs=36.3
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecC----C-CCCC------CCccceEEEEE-eCCEEEEEcCCCCCCCCCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR----F-DMPR------EMAHSHLGMVT-DGRYIYVVTGQYGPQCRGP 188 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~----~-~~~~------~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 188 (381)
++++|+|-| +..|+||..+++...- . ..|. | ..-..+... .++++|+|-|
T Consensus 127 ~gk~yfFkG--------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~-~~iDAAf~~~~~g~~YfFkG--------- 188 (225)
T 3oyo_A 127 GKEVYLFKG--------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFE-SGIDACFASHKEPEAYLFKG--------- 188 (225)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTT-TCCSEEEECSSTTEEEEEET---------
T ss_pred CCcEEEEeC--------CeEEEEECCCCeecCCCcchhhcCCCcccccCC-CCcCEEEEeCCCCEEEEEEC---------
Confidence 679999987 3488898776654431 1 1111 1 112222222 4789999966
Q ss_pred cceEEEEECC
Q 016877 189 TAHTFVLDTE 198 (381)
Q Consensus 189 ~~~~~~yd~~ 198 (381)
+..|+||..
T Consensus 189 -~~ywr~d~~ 197 (225)
T 3oyo_A 189 -QNYVRIDFT 197 (225)
T ss_dssp -TEEEEEECC
T ss_pred -CEEEEEeCC
Confidence 568999998
No 282
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=29.21 E-value=3.1e+02 Score=24.44 Aligned_cols=63 Identities=13% Similarity=0.164 Sum_probs=39.9
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecC---------CCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcce
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR---------FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAH 191 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---------~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 191 (381)
++++|+|-| +..|+||..+++-..- +.+|. +-..++...++++|+|=| +.
T Consensus 284 ~~~~yfFkG--------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~---~iDaA~~~~~g~~YfFkg----------~~ 342 (365)
T 3ba0_A 284 FYRTYFFVD--------NQYWRYDERRQMMDPGYPKLITKNFQGIGP---KIDAVFYSKNKYYYFFQG----------SN 342 (365)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECSSCCCCHHHHSTTCCS---SCSEEEEETTTEEEEEET----------TE
T ss_pred CCEEEEEEC--------CEEEEEeCCcceecCCCCcchhhcCCCCCC---ccceeeEecCCcEEEEeC----------CE
Confidence 469999976 3489999876653321 11222 222333333889999965 56
Q ss_pred EEEEECCCCcEEe
Q 016877 192 TFVLDTETKKWQD 204 (381)
Q Consensus 192 ~~~yd~~~~~W~~ 204 (381)
.|+||..+.+-..
T Consensus 343 ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 343 QFEYDFLLQRITK 355 (365)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCccEEec
Confidence 8999998876544
No 283
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=26.78 E-value=4.7e+02 Score=25.83 Aligned_cols=199 Identities=15% Similarity=0.194 Sum_probs=98.1
Q ss_pred eEEEeCCCCeEecCCC-C-----CCC--CccceEEEEEe---CCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCCC-
Q 016877 140 VDIYNFTDNTWGGRFD-M-----PRE--MAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP- 207 (381)
Q Consensus 140 ~~~yd~~~~~W~~~~~-~-----~~~--~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~- 207 (381)
+++-+-.-.+|+++.. + +.. .....+++++. .+.+|+..|..... .....+++=+-.-.+|+++..
T Consensus 45 v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~--~~~~~i~~S~DgG~TW~~~~~~ 122 (763)
T 3a0f_A 45 TYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQW--DPWAAFLVSDDRGKTFKQYRSP 122 (763)
T ss_dssp EEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTT--CSCCEEEEESSTTSSCEEEECS
T ss_pred EEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccC--CCCceEEEECCCCCCceeccCC
Confidence 6666667789999865 3 210 11223444443 36899876532111 112345554445678998752
Q ss_pred CC-----CCCc-ccEEEEE---CCEEEEEccCCCCCCCCCccceEeeeecCCccCCceEEecCCCCCC---cceeEEEe-
Q 016877 208 LP-----VPRY-APATQLW---RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG---PHRACVVV- 274 (381)
Q Consensus 208 ~p-----~~r~-~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~---~~~~~~~~- 274 (381)
.+ ..|. ...+++. .+.+|+.+- ....|.- +..-.+|+.+..++... .....+.+
T Consensus 123 ~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~--------~~~l~~S-----~DgG~TW~~~~~~~~~~~~~~~~~~i~~~ 189 (763)
T 3a0f_A 123 VPMGANDMGRNGGERLAVNPHWTDELWFGSR--------TQGLWRS-----TDRAQTWSRMNQLPDSSTYGIGIISVIFD 189 (763)
T ss_dssp SCCCTTSTTTTSBCCEEECTTSTTCEEEECS--------SSCEEEE-----SSTTSSCEECTTSCCCSCTTTCEEEEEEC
T ss_pred cccCccccCccccceEEECCCCCCEEEEEeC--------CCcEEEE-----CCCCcCccccccCcccCCCccceEEEEEC
Confidence 11 1121 1234443 356777641 1223322 13456899887665421 12222232
Q ss_pred ---CCEEEEEccCCCCCCCCCCCCccccccCceeecCceeEeC-CCCCeEEcCCCCCC------------------CCCc
Q 016877 275 ---DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKP------------------DSHI 332 (381)
Q Consensus 275 ---~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~i~~~~~~------------------~~~~ 332 (381)
.+.||+.....+ .+|.-+ ...+|+.+...+.. ....
T Consensus 190 p~~~~~~~~~~~~~g----------------------~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 247 (763)
T 3a0f_A 190 PKNVGTAYVASHAVG----------------------GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPL 247 (763)
T ss_dssp SSSTTCEEEEESSTT----------------------CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCE
T ss_pred CCCCCEEEEEEeCCC----------------------eEEEECCCCCCccccCCCccccccccccccccccccccCCCCc
Confidence 245776543210 155544 56789998754421 1111
Q ss_pred ceEEEEE-CCEEEEEcccccccCCceeeeeecceEEEEcCCCceEEee
Q 016877 333 EFAWVLV-NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVAVLNA 379 (381)
Q Consensus 333 ~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~ 379 (381)
.+.+++. ++.||+........... ....+++.+-...+|+.+.
T Consensus 248 ~~~~~~~~~g~l~~~~~~~~~~~~~----~~g~v~rS~D~G~tW~~~~ 291 (763)
T 3a0f_A 248 PIKIALGKNGRLYITYSDAPGPWGV----LYGEVWSYDPTNGNWKHIT 291 (763)
T ss_dssp EEEEEECTTSCEEEEEESSCSSSCC----CCEEEEEEETTTTEEEECC
T ss_pred ceeEEECCCCcEEEEeccCCCCCCC----cceeEEEEeCCCCceEECC
Confidence 2222222 57888874211000000 0125888888888898764
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=26.55 E-value=5e+02 Score=25.97 Aligned_cols=171 Identities=9% Similarity=0.002 Sum_probs=84.3
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCc----e-eeecCCCCCCCceeEEe--e-ecccccccccCcceEeecCCCCCeEE
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHN----S-IILPNNGPQKGENIGVK--T-KKDVVPKRILPATFQDLPAPELKWEK 104 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~----~-~~~p~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~W~~ 104 (381)
++.||+.-..+ +.+.++++... . ..+.........++++- + .+|..- .....+.+++.....-+.
T Consensus 435 ~~~lY~sD~~~-----~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD--~~~~~I~v~~ldG~~~~~ 507 (791)
T 3m0c_C 435 SNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD--SVLGTVSVADTKGVKRKT 507 (791)
T ss_dssp TTEEEEEETTT-----TEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE--TTTTEEEEEETTSSSEEE
T ss_pred CCeeEEeeccc-----eeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe--cCCCeEEEEeCCCCeEEE
Confidence 57788775422 24566666532 1 22212112223344432 2 233322 233467777776555444
Q ss_pred cc--CCCCCCCCceEEE--ECCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEe--CCEEEEEc
Q 016877 105 MK--AAPVPRLDGAAIQ--IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVT 178 (381)
Q Consensus 105 l~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~G 178 (381)
+. .+..|| ++++ .+++||+.--.. ...++++++....-+.+..-.. ....++++. +++||+.=
T Consensus 508 l~~~~l~~P~---gIaVDp~~g~LYwtD~g~-----~~~I~~~~~dG~~~~~lv~~~l---~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 508 LFRENGSKPR---AIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTENI---QWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp EEECTTCCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCCEEEEECSSC---SCEEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcc---eEEEecCCCCEEEecCCC-----CCeEEEEecCCCceEEEEeCCC---CCceEEEEecCCCeEEEEe
Confidence 42 232332 2333 257899874111 1358888887654443322111 122345544 78999983
Q ss_pred CCCCCCCCCCcceEEEEECCCCcEEeCC-CCCCCCcccEEEEECCEEEEEcc
Q 016877 179 GQYGPQCRGPTAHTFVLDTETKKWQDLP-PLPVPRYAPATQLWRGRLHVMGG 229 (381)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG 229 (381)
. ..+.++++|+....=+.+. ....-...+++++.+++||+.-.
T Consensus 577 ~--------~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 577 S--------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp T--------TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEET
T ss_pred C--------CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEEC
Confidence 2 1467999998754333332 11111133467778999999854
No 285
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=26.22 E-value=2.9e+02 Score=23.16 Aligned_cols=101 Identities=6% Similarity=-0.068 Sum_probs=50.0
Q ss_pred ceEeecCCCCCeEEccCCC-CC---CCCceEEEECCEEEEE----ecCCC-------CCCcccceEEEeCCCCeEecCCC
Q 016877 91 TFQDLPAPELKWEKMKAAP-VP---RLDGAAIQIKNLLYVF----AGYGS-------IDYVHSHVDIYNFTDNTWGGRFD 155 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p-~~---r~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~~~~W~~~~~ 155 (381)
.+.++++. .+.+.+.... .. +....++.-++.||+. |-... .......+++||+.+++.+.+.
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~- 185 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA- 185 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-
Confidence 57777775 5555543211 11 1112223336688875 42210 1111246999999888877654
Q ss_pred CCCCCccceEEEEEe--CCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 156 MPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 156 ~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
.. .....++.. +..+|+........ ....+++||...+
T Consensus 186 -~~---~~p~gl~~spdg~~lyv~~~~~~~~---~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 186 -DL---DHPNGLAFSPDEQTLYVSQTPEQGH---GSVEITAFAWRDG 225 (305)
T ss_dssp -EE---SSEEEEEECTTSSEEEEEECCC------CCCEEEEEEEETT
T ss_pred -cC---CCCcceEEcCCCCEEEEEecCCcCC---CCCEEEEEEecCC
Confidence 11 112234443 33588774321100 0256888887654
No 286
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=22.58 E-value=6.1e+02 Score=25.61 Aligned_cols=63 Identities=17% Similarity=0.092 Sum_probs=32.2
Q ss_pred CCEEEEEecCCCCCCcccceEEEeCCCCeEecCCCCCCCCccceEEEEEeCCEEEEEcCCCCCCCCCCcceEEEEECCCC
Q 016877 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (381)
Q Consensus 121 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (381)
++.+++.|+.++ .+.+||..+.+-... ++. ...-.+++...+++.+.|+.+ ..+..+|..+.
T Consensus 28 dg~~lAsgs~Dg------~I~lw~~~~~~~~~~--~~~--~~~V~~l~fspg~~L~S~s~D--------~~v~lWd~~~~ 89 (902)
T 2oaj_A 28 TQNLLAIATVTG------EVHIYGQQQVEVVIK--LED--RSAIKEMRFVKGIYLVVINAK--------DTVYVLSLYSQ 89 (902)
T ss_dssp TTTEEEEEETTS------EEEEECSTTCEEEEE--CSS--CCCEEEEEEETTTEEEEEETT--------CEEEEEETTTC
T ss_pred CCCEEEEEeCCC------EEEEEeCCCcEEEEE--cCC--CCCEEEEEEcCCCEEEEEECc--------CeEEEEECCCC
Confidence 456677776542 466777665543221 111 111223443435544455432 45788888876
Q ss_pred c
Q 016877 201 K 201 (381)
Q Consensus 201 ~ 201 (381)
+
T Consensus 90 ~ 90 (902)
T 2oaj_A 90 K 90 (902)
T ss_dssp S
T ss_pred c
Confidence 4
No 287
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=22.56 E-value=4.1e+02 Score=23.61 Aligned_cols=90 Identities=9% Similarity=0.143 Sum_probs=46.7
Q ss_pred eEEEECCEEEEEecCCCCCCcccceEEEeCCCC---------eEecCCCCCCCCccceEEEEE-eCCEEEEEcCCCCCCC
Q 016877 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDN---------TWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQC 185 (381)
Q Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---------~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~ 185 (381)
+++.+++++|+|=|. .+|+++.... .|.. +|. ....+... .++++|+|=|
T Consensus 185 Av~~~~g~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wpg---LP~---~iDAa~~~~~~g~~~fFkg------ 244 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDR--------FFWLKVSERPKTSVNLISSLWPT---LPS---GIEAAYEIEARNQVFLFKD------ 244 (365)
T ss_dssp CEEEETTEEEEEETT--------EEEECCSSCCCCCEEEHHHHCSS---CCS---SCCEEEEEGGGTEEEEEET------
T ss_pred eEEEcCCeEEEEeCC--------EEEEEcCCCccCCccchhhhccC---CCC---CccEEEEecCCCEEEEEeC------
Confidence 345678999999763 3555554332 2333 332 22222222 3789999965
Q ss_pred CCCcceEEEEECCCCc--E-EeCCC--CCCC-CcccEEEEE--CCEEEEEcc
Q 016877 186 RGPTAHTFVLDTETKK--W-QDLPP--LPVP-RYAPATQLW--RGRLHVMGG 229 (381)
Q Consensus 186 ~~~~~~~~~yd~~~~~--W-~~~~~--~p~~-r~~~~~~~~--~~~lyv~GG 229 (381)
+..|+|+..+.. + +.+.. +|.. ..--++... ++++|+|-|
T Consensus 245 ----~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG 292 (365)
T 3ba0_A 245 ----DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD 292 (365)
T ss_dssp ----TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET
T ss_pred ----CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC
Confidence 457787654321 1 12322 2321 122233333 579999966
No 288
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=22.40 E-value=3.7e+02 Score=23.10 Aligned_cols=23 Identities=4% Similarity=0.185 Sum_probs=15.8
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS 60 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (381)
.+.+.+.|+.++ .+..||..+++
T Consensus 70 ~~~~~~~~~~d~-----~v~iWd~~~~~ 92 (355)
T 3vu4_A 70 TNYVAFVTGVKE-----VVHIWDDVKKQ 92 (355)
T ss_dssp SSEEEEECSSTT-----EEEEEETTTTE
T ss_pred CCEEEEEECCcc-----EEEEEECCCCc
Confidence 455656666443 78889988877
No 289
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=21.77 E-value=4.4e+02 Score=23.66 Aligned_cols=112 Identities=7% Similarity=-0.051 Sum_probs=58.3
Q ss_pred cCEEEEecCCCCCcccceeeeeeCCCce--eeecC-CCCCCCceeEEeee-ccccccc-------ccCcceEeecCCCCC
Q 016877 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPN-NGPQKGENIGVKTK-KDVVPKR-------ILPATFQDLPAPELK 101 (381)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~~p~-~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~ 101 (381)
.+.+|+.-... ....+.+..+|+.+++ ..+|. ..| . ..+..-+. .|..... .....+..+|+.+.+
T Consensus 44 ~~~vyV~~~~~-~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 44 ARRVYVNDPAH-FAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp TTEEEEEECGG-GCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCEEEEEcCcc-cCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 66788886521 0112689999999998 45554 223 1 22221122 2222110 123468899999887
Q ss_pred eEEccCCCC-CC-----CCceEE-EE-CCEEEEEecCCCCCCcccceEEEeCCCCeEec
Q 016877 102 WEKMKAAPV-PR-----LDGAAI-QI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG 152 (381)
Q Consensus 102 W~~l~~~p~-~r-----~~~~~~-~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 152 (381)
-..--+++. .| .-+.++ .- +.++||.... ..+.+.+.|..+++-..
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-----~~~~VsVID~~t~~vv~ 174 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-----PAPAVGVVDLEGKAFKR 174 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-----SSCEEEEEETTTTEEEE
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-----CCCeEEEEECCCCcEEE
Confidence 433222222 12 122233 32 3478886421 12468899999886443
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=20.30 E-value=4.6e+02 Score=23.33 Aligned_cols=116 Identities=14% Similarity=0.039 Sum_probs=59.4
Q ss_pred ceEeecCCCCCeEEccCCCCCCCCceEEEE--CCEEEEEecCCCCCCcccceEEEeCCCC----eEecCCCCCCCCccce
Q 016877 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDN----TWGGRFDMPREMAHSH 164 (381)
Q Consensus 91 ~~~~~~~~~~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~~~~~~~~~~r~~ 164 (381)
.+...+.....++.+.+ ..+.-.+++.. ++.||+.--. ...++++++... ....+..... ...
T Consensus 93 ~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~------~~~I~~~~~~g~~~~~~~~~~~~~~~---~~p 161 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDI---QAP 161 (400)
T ss_dssp EEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEEC------CCCEEEECSSC---SCE
T ss_pred eeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC------CCeEEEEEcccCCCCCcceEEEeCCC---CCc
Confidence 45566666666655432 22222333333 5789987432 234778887652 1222211111 122
Q ss_pred EEEEE--eCCEEEEEcCCCCCCCCCCcceEEEEECCCCcEEeCC--CCCCCCcccEEEE--ECCEEEEEc
Q 016877 165 LGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (381)
Q Consensus 165 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~lyv~G 228 (381)
.++++ .++.||+.-.. ...++++|++...-+.+. .+..|+ .+++ .++.||+.-
T Consensus 162 ~glavD~~~~~lY~~d~~--------~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td 220 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTD 220 (400)
T ss_dssp EEEEEETTTTEEEEEETT--------TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEE
T ss_pred ccEEEEecCCceEEEECC--------CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEe
Confidence 34455 47899998421 356889998876544432 232332 3344 267898874
Done!