Query 016880
Match_columns 381
No_of_seqs 262 out of 1516
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 05:19:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016880.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016880hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ku2a2 a.177.1.1 (A:93-272) S 100.0 2.5E-34 1.8E-38 254.9 11.5 148 223-370 2-180 (180)
2 d1siga_ a.177.1.1 (A:) Sigma70 99.9 5E-24 3.7E-28 202.0 15.5 83 285-367 248-334 (334)
3 d1rp3a3 a.177.1.1 (A:0-86) Sig 99.9 1.7E-22 1.3E-26 162.0 9.3 74 296-369 11-87 (87)
4 d1or7a2 a.177.1.1 (A:-1-111) S 99.0 2E-10 1.4E-14 92.6 7.9 86 282-370 8-94 (113)
5 d1h3la_ a.177.1.1 (A:) Sigma f 97.9 7.4E-06 5.4E-10 61.1 5.1 67 296-364 8-74 (75)
6 d1l0oc_ a.4.13.2 (C:) SigmaF { 96.1 0.0061 4.4E-07 43.6 6.3 42 252-293 14-55 (57)
7 d1rp3a1 a.4.13.1 (A:87-163) Si 95.0 0.022 1.6E-06 42.2 6.1 40 252-291 9-48 (77)
8 d1ku2a1 a.4.13.1 (A:273-332) S 92.4 0.14 1E-05 36.7 6.1 43 249-291 8-52 (60)
9 d1bl0a1 a.4.1.8 (A:9-62) MarA 62.7 4.7 0.00034 26.7 4.3 38 254-291 4-41 (54)
10 d1d5ya1 a.4.1.8 (A:3-56) Rob t 33.7 18 0.0013 23.6 3.5 38 254-291 4-41 (54)
11 d1jhfa1 a.4.5.2 (A:2-72) LexA 26.4 81 0.0059 21.8 6.2 23 264-286 19-42 (71)
12 d1lvaa3 a.4.5.35 (A:511-574) C 25.2 94 0.0069 21.1 6.3 29 262-290 16-44 (64)
13 d2ofya1 a.35.1.3 (A:3-84) Puta 22.4 51 0.0037 23.6 4.5 48 271-327 27-74 (82)
No 1
>d1ku2a2 a.177.1.1 (A:93-272) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=100.00 E-value=2.5e-34 Score=254.91 Aligned_cols=148 Identities=27% Similarity=0.436 Sum_probs=118.0
Q ss_pred hHHHHHhhcCCC-CCCCcHHHHHHHHHhHHHHHHHHHHHHHH------------------HHhCCcCchhHHHHHcCC--
Q 016880 223 FSAERALNSRGR-RLTIARNEAEMSKGVQVVANLERIKTTLE------------------KESGKAASLNCWAQAAGV-- 281 (381)
Q Consensus 223 ~~v~~~~~~~~~-~lLtaeEE~eL~~~iq~~~~Le~~r~~L~------------------~~~gr~ps~~ewA~aagl-- 281 (381)
++|+-|++..++ ||||++||++|+++|+.+..+.+...+.. ...+..|...+|+.....
T Consensus 2 DpVr~YLreig~v~LLT~EEEieLAr~Ie~g~~~~~~~~e~~~~~~~l~~e~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 81 (180)
T d1ku2a2 2 DPVRQYLHEIGQVPLLTLEEEIDLARKVEEGMEAIKKLSEATGLDQELIREVVRAKILGTARIQKIPGLKEKPDPKTVEE 81 (180)
T ss_dssp HHHHHHHHHHTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCSSCCCTTSCCSSCTTTHHH
T ss_pred CcHHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHHhhhHHHHhcchhhHHHhhHHHHHH
Confidence 346667776665 89999999999999998776554332221 012334444333222111
Q ss_pred ----------CHHHHHHHHHhcHHHHHHHHHHhhHHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHhhcCCCCCCccchH
Q 016880 282 ----------SERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTY 351 (381)
Q Consensus 282 ----------~~eeL~~~l~~G~~Are~LIe~nlrLV~~IAkry~~rg~d~EDLiQEG~IGLikAvekFDpsrG~rFSTY 351 (381)
....+....+.|+.|+++||+.|+|||++||++|.++|++++||||||+|||++|+++|||++|++|+||
T Consensus 82 ~~~~~~~~~~el~~l~~~~~~~~~a~~~li~~~~~lv~~~a~~~~~~~~~~~dl~q~g~~gl~~a~~~fd~~~g~~f~ty 161 (180)
T d1ku2a2 82 VDGKLKSLPKELKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTY 161 (180)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCSSSSCHHHHHHHHHHHHHHHHHHCCGGGCSCHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 1355667778889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC
Q 016880 352 VQYWIRKSISKMVARHARG 370 (381)
Q Consensus 352 A~~wIr~aI~~~Ir~qsr~ 370 (381)
|+|||+++|.++|++++|+
T Consensus 162 a~~~i~~~i~~~~~~~~rt 180 (180)
T d1ku2a2 162 ATWWIRQAINRAIADQART 180 (180)
T ss_dssp HHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999875
No 2
>d1siga_ a.177.1.1 (A:) Sigma70 {Escherichia coli [TaxId: 562]}
Probab=99.90 E-value=5e-24 Score=201.96 Aligned_cols=83 Identities=34% Similarity=0.788 Sum_probs=76.4
Q ss_pred HHHHHHHhcH----HHHHHHHHHhhHHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHHHHH
Q 016880 285 VLKQHLAFGW----YCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSI 360 (381)
Q Consensus 285 eL~~~l~~G~----~Are~LIe~nlrLV~~IAkry~~rg~d~EDLiQEG~IGLikAvekFDpsrG~rFSTYA~~wIr~aI 360 (381)
.+.+.+..|. .|+++||+.|++||++||++|.++|++++||+|+|++||++||++|||.+|++|+|||+|||||+|
T Consensus 248 ~i~~~i~~ge~~~~~ak~~~~~~~~~lv~~~~~~~~~~~~~~~dl~~~~~~~l~~~~~~~~~~~~~~f~~~~~~~~~~~~ 327 (334)
T d1siga_ 248 DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 327 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHTTSTTSSSCHHHHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccchHHHHHHhHHHHHHHHHHhccCCCCCHHHHHHhhHHHHHHHHHhcCCCCCCchHhhhHHHHHHHH
Confidence 3444555554 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc
Q 016880 361 SKMVARH 367 (381)
Q Consensus 361 ~~~Ir~q 367 (381)
.++|++|
T Consensus 328 ~~~~~~~ 334 (334)
T d1siga_ 328 TRSIADQ 334 (334)
T ss_dssp HHHHHHC
T ss_pred HHHHhCC
Confidence 9999986
No 3
>d1rp3a3 a.177.1.1 (A:0-86) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=99.87 E-value=1.7e-22 Score=161.98 Aligned_cols=74 Identities=23% Similarity=0.367 Sum_probs=70.3
Q ss_pred HHHHHHHHhhHHHHHHHHHccCC---CCCHHHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHHHHHHHHHHHcCC
Q 016880 296 CREELIKSTRPLVLFLARNYRGL---GIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHAR 369 (381)
Q Consensus 296 Are~LIe~nlrLV~~IAkry~~r---g~d~EDLiQEG~IGLikAvekFDpsrG~rFSTYA~~wIr~aI~~~Ir~qsr 369 (381)
.+++||+.|+|||.++|++|.++ ++++|||+|+|++||++|+++|||++|++|+|||.+|||++|.++||++++
T Consensus 11 ~re~li~~~~~LV~~ia~~~~~~~~~~~e~eDL~q~G~igL~~A~~~yd~~~g~~F~tYA~~~Irgai~d~lRk~dw 87 (87)
T d1rp3a3 11 EREELILKYLPLVKAIATNIKKHLPEDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRSLDF 87 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCTTSCHHHHHHHHHHHHHHHHHTCCCCCTHHHHHHHHHHHHHHHHHHHHTSST
T ss_pred HHHHHHHHhHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 68999999999999999999765 899999999999999999999999999999999999999999999998764
No 4
>d1or7a2 a.177.1.1 (A:-1-111) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=99.04 E-value=2e-10 Score=92.62 Aligned_cols=86 Identities=15% Similarity=0.169 Sum_probs=77.7
Q ss_pred CHHHHHHHHHhcHH-HHHHHHHHhhHHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHHHHH
Q 016880 282 SERVLKQHLAFGWY-CREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSI 360 (381)
Q Consensus 282 ~~eeL~~~l~~G~~-Are~LIe~nlrLV~~IAkry~~rg~d~EDLiQEG~IGLikAvekFDpsrG~rFSTYA~~wIr~aI 360 (381)
++++|+.+++.|+. |.++|+..|.+.|..++.++.+. -+.+|++|++++.+|+.+.+|++. + .|.+|++.-+++.+
T Consensus 8 tD~~Li~~~~~Gd~~Af~~l~~~y~~~l~~~~~~~~~~-~daeDl~Qe~~l~~~~~~~~~~~~-~-~~~~wl~~I~~n~~ 84 (113)
T d1or7a2 8 TDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPS-GDVPDVVQEAFIKAYRALDSFRGD-S-AFYTWLYRIAVNTA 84 (113)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTSCG-GGHHHHHHHHHHHHHHHGGGCCSS-S-CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHhcccccCC-C-CHHHHHHHHHHHHH
Confidence 36789999999986 99999999999999999999766 579999999999999999999975 3 69999999999999
Q ss_pred HHHHHHcCCC
Q 016880 361 SKMVARHARG 370 (381)
Q Consensus 361 ~~~Ir~qsr~ 370 (381)
.+.+|+..+.
T Consensus 85 ~d~~R~~~r~ 94 (113)
T d1or7a2 85 KNYLVAQGRR 94 (113)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 9999987653
No 5
>d1h3la_ a.177.1.1 (A:) Sigma factor SigR {Streptomyces coelicolor a3(2) [TaxId: 100226]}
Probab=97.86 E-value=7.4e-06 Score=61.10 Aligned_cols=67 Identities=9% Similarity=-0.028 Sum_probs=61.9
Q ss_pred HHHHHHHHhhHHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHHHHHHHHH
Q 016880 296 CREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMV 364 (381)
Q Consensus 296 Are~LIe~nlrLV~~IAkry~~rg~d~EDLiQEG~IGLikAvekFDpsrG~rFSTYA~~wIr~aI~~~I 364 (381)
.+++++..|.+.+..+|.++.+...+.+|++|+.++-+++...+|++. ..|.+|...-+++.+.+.+
T Consensus 8 ~f~~~~~~y~~~l~~~~~~~~~d~~~aeDivQd~f~~~~~~~~~~~~~--~~~~~wl~~i~~n~~~d~~ 74 (75)
T d1h3la_ 8 RFERDALEFLDQMYSAALRMTRNPADAEDLVQETYAKAYASFHQFREG--TNLKAWLYRILTNTFINSY 74 (75)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHGGGCCSS--SCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhhhcCCC--CCHHHHHHHHHHHHHHHHh
Confidence 689999999999999999999988999999999999999999999974 3699999999999998764
No 6
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.12 E-value=0.0061 Score=43.56 Aligned_cols=42 Identities=19% Similarity=0.194 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhCCcCchhHHHHHcCCCHHHHHHHHHhc
Q 016880 252 VANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFG 293 (381)
Q Consensus 252 ~~~Le~~r~~L~~~~gr~ps~~ewA~aagl~~eeL~~~l~~G 293 (381)
..++.++..+|..++|++||.++.|++.|++.+++...+..+
T Consensus 14 ~~ki~~~~~~l~q~lgRePT~~EiA~~l~~~~e~V~~~l~a~ 55 (57)
T d1l0oc_ 14 GNKIRKAKDELSKTRGRAPTVTEIADHLGISPEDVVLAQEAV 55 (57)
T ss_dssp HHHHHHHHHHHHHHHTSCCBHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCHHHHHHHHCcCHHHHHHHHHHh
Confidence 345778889999999999999999999999999998877653
No 7
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=95.02 E-value=0.022 Score=42.20 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhCCcCchhHHHHHcCCCHHHHHHHHH
Q 016880 252 VANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLA 291 (381)
Q Consensus 252 ~~~Le~~r~~L~~~~gr~ps~~ewA~aagl~~eeL~~~l~ 291 (381)
..+++++..+|..++||+||.++.|+..|++.+++.+.+.
T Consensus 9 ~~ki~~a~~~L~~~lGR~Pt~~EiA~~lg~s~~e~~~~l~ 48 (77)
T d1rp3a1 9 ERRIKEVVEKLKEKLGREPTDEEVAKELGISTEELFKTLD 48 (77)
T ss_dssp HHHHHHHHHHHHHHHSSCCCHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCCCHHHHHHHHCcCHHHHHHHHH
Confidence 4468889999999999999999999999999998877653
No 8
>d1ku2a1 a.4.13.1 (A:273-332) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=92.42 E-value=0.14 Score=36.66 Aligned_cols=43 Identities=26% Similarity=0.411 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHHHHhCCcCchhHHHHHcCC--CHHHHHHHHH
Q 016880 249 VQVVANLERIKTTLEKESGKAASLNCWAQAAGV--SERVLKQHLA 291 (381)
Q Consensus 249 iq~~~~Le~~r~~L~~~~gr~ps~~ewA~aagl--~~eeL~~~l~ 291 (381)
++..-++.++..+|..++||+||.+|.|++.|+ +.+.+...+.
T Consensus 8 ~e~i~rv~r~~~~l~qe~gRePt~eEiA~~l~~~l~~ekV~~~l~ 52 (60)
T d1ku2a1 8 VETINKLSRTARQLQQELGREPSYEEIAEAMGPGWDAKRVEETLK 52 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHCSSCCHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHCCCCCHHHHHHHHH
Confidence 344556778888999999999999999999874 5666655443
No 9
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=62.71 E-value=4.7 Score=26.73 Aligned_cols=38 Identities=18% Similarity=0.209 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhCCcCchhHHHHHcCCCHHHHHHHHH
Q 016880 254 NLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLA 291 (381)
Q Consensus 254 ~Le~~r~~L~~~~gr~ps~~ewA~aagl~~eeL~~~l~ 291 (381)
.++++..-+++....+++.+++|+.+|++...|.+..+
T Consensus 4 ~i~~v~~yI~~~~~~~~tl~~lA~~~~~s~~~l~r~Fk 41 (54)
T d1bl0a1 4 TIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFK 41 (54)
T ss_dssp HHHHHHHHHHTTTTSCCCCHHHHHHSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCHHHHHHHHCcCHHHHHHHHH
Confidence 46677777888889999999999999999988876554
No 10
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.74 E-value=18 Score=23.65 Aligned_cols=38 Identities=24% Similarity=0.204 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhCCcCchhHHHHHcCCCHHHHHHHHH
Q 016880 254 NLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLA 291 (381)
Q Consensus 254 ~Le~~r~~L~~~~gr~ps~~ewA~aagl~~eeL~~~l~ 291 (381)
.++++..-+++....+.+.+++|+.+|++...|.+..+
T Consensus 4 ii~~i~~yi~~~~~~~itl~~lA~~~~~S~~~l~r~Fk 41 (54)
T d1d5ya1 4 IIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFK 41 (54)
T ss_dssp HHHHHHHHHHTTSSSSCCCHHHHTTTSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCHHHHHHHHCcCHHHHHHHHH
Confidence 35567777888889999999999999999988766554
No 11
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=26.37 E-value=81 Score=21.82 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=18.4
Q ss_pred HHhCCcCchhHHHHHcCC-CHHHH
Q 016880 264 KESGKAASLNCWAQAAGV-SERVL 286 (381)
Q Consensus 264 ~~~gr~ps~~ewA~aagl-~~eeL 286 (381)
.+.|.+||..+.|++.|+ +...+
T Consensus 19 ~~~G~~Ps~rei~~~~g~~S~stv 42 (71)
T d1jhfa1 19 SQTGMPPTRAEIAQRLGFRSPNAA 42 (71)
T ss_dssp HHHSSCCCHHHHHHHTTCSSHHHH
T ss_pred HHhCCCCCHHHHHHHcCCCCHHHH
Confidence 345999999999999998 55443
No 12
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=25.24 E-value=94 Score=21.10 Aligned_cols=29 Identities=14% Similarity=0.065 Sum_probs=21.8
Q ss_pred HHHHhCCcCchhHHHHHcCCCHHHHHHHH
Q 016880 262 LEKESGKAASLNCWAQAAGVSERVLKQHL 290 (381)
Q Consensus 262 L~~~~gr~ps~~ewA~aagl~~eeL~~~l 290 (381)
+.+.--.+|+..+.|+..|+++.++...+
T Consensus 16 ~~~~g~~PP~vrdl~~~l~~~e~~~~~lL 44 (64)
T d1lvaa3 16 YRVSRWQPPSFKEVAGSFNLDPSELEELL 44 (64)
T ss_dssp HHHHTTSCCBHHHHHHHTTCCHHHHHHHH
T ss_pred HHHcCCCCCcHHHHHHHhCCCHHHHHHHH
Confidence 33333489999999999999988765543
No 13
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=22.44 E-value=51 Score=23.64 Aligned_cols=48 Identities=21% Similarity=0.243 Sum_probs=34.3
Q ss_pred chhHHHHHcCCCHHHHHHHHHhcHHHHHHHHHHhhHHHHHHHHHccCCCCCHHHHHH
Q 016880 271 SLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQ 327 (381)
Q Consensus 271 s~~ewA~aagl~~eeL~~~l~~G~~Are~LIe~nlrLV~~IAkry~~rg~d~EDLiQ 327 (381)
+..+.|+.+|++...|- .+..|+.. .-....+.+||.-+ |++++||+.
T Consensus 27 t~~eLA~~~Gvs~~~ls-~iE~G~~~-----~ps~~tl~kia~~L---~v~~~~Ll~ 74 (82)
T d2ofya1 27 SMVTVAFDAGISVETLR-KIETGRIA-----TPAFFTIAAVARVL---DLSLDDVAA 74 (82)
T ss_dssp CHHHHHHHHTCCHHHHH-HHHTTCCS-----SCBHHHHHHHHHHT---TCCHHHHHT
T ss_pred CHHHHHHHHcCCHHHHH-HHHcCCcC-----CCCHHHHHHHHHHH---CCCHHHHHh
Confidence 77899999999987764 45555310 01356678888877 799999985
Done!