BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016881
(381 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q56XQ0|U496I_ARATH UPF0496 protein At2g18630 OS=Arabidopsis thaliana GN=At2g18630 PE=2
SV=3
Length = 393
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/382 (60%), Positives = 312/382 (81%), Gaps = 6/382 (1%)
Query: 1 MMGGQSSKKKGG---DAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSR 57
MMGG+SSK K +PS P+++ +++Y+ LS YE AC DP L+SFD+ + ERT+R
Sbjct: 1 MMGGKSSKSKKNVEFGSPSTPVQIKINSEYTEHLSSYERACSEDPKLESFDSALHERTNR 60
Query: 58 VIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFET 117
VI+KL++GVE+ SLSFDSL+EVT LL+MNQ+VVKVIL+ K+DIWNNQDLF LV YFE+
Sbjct: 61 VINKLASGVEIKSLSFDSLREVTQCLLDMNQDVVKVILQDKEDIWNNQDLFSLVNLYFES 120
Query: 118 SIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDA 177
+ KT+DFC+ LENCL RAR SQ+IIQ AV QF+EE E +E ++Y +TL+ELK+FK A
Sbjct: 121 TAKTMDFCSELENCLNRARRSQVIIQFAVNQFEEENEDKE---NRKYEKTLEELKRFKVA 177
Query: 178 GDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLI 237
G+PFT+EFF LF VYKQQV+MLE L K KRKLDK+L+++KTWR VSN++FV+ FV+VLI
Sbjct: 178 GEPFTKEFFALFDLVYKQQVMMLEELHKLKRKLDKRLRNIKTWRRVSNMVFVTAFVSVLI 237
Query: 238 FSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVK 297
FSVVAAA+AAPP+V A+AGALAVP+GSVGKWCN+LW YEK ++GQKE++++++IG Y+
Sbjct: 238 FSVVAAAVAAPPVVAAIAGALAVPVGSVGKWCNTLWTKYEKVVRGQKEIITSIRIGTYIS 297
Query: 298 IMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHA 357
+ +MD+I +LV K+E++IE+LL A+FA+ EE V+LAI+EI+K+L+VF ETIE L +HA
Sbjct: 298 VKEMDNISILVRKVEVEIESLLKKAEFAITEEKEVRLAIDEIKKKLDVFTETIEELGEHA 357
Query: 358 DKCSRDIRRARTVILQKIIKYP 379
K D+ +ARTVILQ+II+YP
Sbjct: 358 GKYCSDVTKARTVILQRIIRYP 379
>sp|Q9SYZ7|U496A_ARATH UPF0496 protein At4g34320 OS=Arabidopsis thaliana GN=At4g34320 PE=1
SV=1
Length = 374
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/380 (58%), Positives = 289/380 (76%), Gaps = 11/380 (2%)
Query: 2 MGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHK 61
MG Q+SKK + Y+ +L Y AAC+ D +LQSFD +Q RTS VI
Sbjct: 1 MGNQTSKKSQETSAKS-------VHYTTELRSYAAACKADTELQSFDTCLQARTSHVIST 53
Query: 62 LSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKT 121
L+ GVEV +LSFDSLKEVT LLEMNQEVVKVIL+CKKDIW NQ++F LVEDYFE S+KT
Sbjct: 54 LATGVEVRALSFDSLKEVTQCLLEMNQEVVKVILDCKKDIWKNQEMFELVEDYFENSLKT 113
Query: 122 LDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPF 181
LDFC LE L+RAR+S L+I +A++QF++E +Q Y +TL+ELK FKDA PF
Sbjct: 114 LDFCAALEKGLRRARDSHLLILVALQQFEDESLVQ---GGNGYKKTLEELKNFKDAESPF 170
Query: 182 TEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVV 241
E+FF +FQSVYKQQ+LMLE+LQ RK KLDKKLK + TWR +S+++FV+TF VLI SVV
Sbjct: 171 NEDFFKMFQSVYKQQMLMLEKLQHRKNKLDKKLKCIHTWRKLSSIIFVATFATVLICSVV 230
Query: 242 AAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDM 301
AAA+AAPP+ ALA A AVP+GS+GKW +SLW +YE ALKGQKE++S+MQ G +V + D+
Sbjct: 231 AAAMAAPPVAAALAAATAVPLGSMGKWIDSLWKNYENALKGQKEVISSMQAGTFVAVKDL 290
Query: 302 DHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCS 361
D+IRVL+ +LEI+I ++ +A+FA+ E + VK+ I++I+K+LEVF + +E L AD CS
Sbjct: 291 DNIRVLIERLEIEITGMVKSAEFAV-EHNAVKIGIDDIKKKLEVFKKNVEELGTQADLCS 349
Query: 362 RDIRRARTVILQKIIKYPNN 381
RDIRRARTVILQ+IIK+PNN
Sbjct: 350 RDIRRARTVILQRIIKHPNN 369
>sp|Q10QE9|U496A_ORYSJ UPF0496 protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0199100
PE=2 SV=1
Length = 388
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/354 (58%), Positives = 287/354 (81%), Gaps = 7/354 (1%)
Query: 34 YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKV 93
YEAACR DP+L++FD T+Q RTSR I L+ GVEV SLS +SL+EVTG LL+MNQEVV+V
Sbjct: 35 YEAACRSDPELRTFDTTLQRRTSRAISTLAVGVEVRSLSLESLREVTGCLLDMNQEVVRV 94
Query: 94 ILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV 153
IL+CKKDIW + +LF LVEDYFE+S+ TLDFCT L+ CLKRAR+SQL++ +A+++FD+E
Sbjct: 95 ILDCKKDIWKSPELFDLVEDYFESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEE 154
Query: 154 E-------LQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKR 206
+ ++ RY RTL EL++FK AGDPFTEEFF FQ+VY+QQ+ MLE+LQ+R
Sbjct: 155 DNDAAAAGQEDAAPSARYARTLHELRQFKAAGDPFTEEFFSAFQAVYRQQLTMLEKLQQR 214
Query: 207 KRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVG 266
K +LDKK++++K WR VS+++F +TF AVLI SVVAAAIAAPP+ ALA A ++P+GS+G
Sbjct: 215 KHRLDKKVRAIKAWRRVSSIIFATTFAAVLICSVVAAAIAAPPVAAALAAAASIPVGSMG 274
Query: 267 KWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFAL 326
KW +SL Y+ AL+GQKE++S MQ+G ++ I D+D IRVL+N++E++I ++++ +FA
Sbjct: 275 KWIDSLLKGYQDALRGQKEVVSAMQVGTFIAIKDLDSIRVLINRVELEISSMIDCVEFAE 334
Query: 327 REEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPN 380
R+E+ VK +EEI+K+LEVFM+++E L + AD+CSRDIRRARTV+LQ+II++P+
Sbjct: 335 RDEEAVKFGVEEIKKKLEVFMKSVEDLGEQADRCSRDIRRARTVVLQRIIRHPS 388
>sp|A2XDK8|U496A_ORYSI UPF0496 protein 1 OS=Oryza sativa subsp. indica GN=OsI_010151 PE=2
SV=1
Length = 388
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/354 (58%), Positives = 287/354 (81%), Gaps = 7/354 (1%)
Query: 34 YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKV 93
YEAACR DP+L++FD T+Q RTSR I L+ GVEV SLS +SL+EVTG LL+MNQEVV+V
Sbjct: 35 YEAACRSDPELRTFDTTLQRRTSRAISTLAVGVEVRSLSLESLREVTGCLLDMNQEVVRV 94
Query: 94 ILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV 153
IL+CKKDIW + +LF LVEDYFE+S+ TLDFCT L+ CLKRAR+SQL++ +A+++FD+E
Sbjct: 95 ILDCKKDIWKSPELFDLVEDYFESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEE 154
Query: 154 E-------LQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKR 206
+ ++ RY RTL EL++FK AGDPFTEEFF FQ+VY+QQ+ MLE+LQ+R
Sbjct: 155 DNDAAAAGQEDAAPSARYARTLHELRQFKAAGDPFTEEFFSAFQAVYRQQLTMLEKLQQR 214
Query: 207 KRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVG 266
K +LDKK++++K WR VS+++F +TF AVLI SVVAAAIAAPP+ ALA A ++P+GS+G
Sbjct: 215 KHRLDKKVRAIKAWRRVSSIIFATTFAAVLICSVVAAAIAAPPVAAALAAAASIPVGSMG 274
Query: 267 KWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFAL 326
KW +SL Y+ AL+GQKE++S MQ+G ++ I D+D IRVL+N++E++I ++++ +FA
Sbjct: 275 KWIDSLLKGYQDALRGQKEVVSAMQVGTFIAIKDLDSIRVLINRVELEISSMIDCVEFAE 334
Query: 327 REEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPN 380
R+E+ VK +EEI+K+LEVFM+++E L + AD+CSRDIRRARTV+LQ+II++P+
Sbjct: 335 RDEEAVKFGVEEIKKKLEVFMKSVEDLGEQADRCSRDIRRARTVVLQRIIRHPS 388
>sp|Q8GW16|U496H_ARATH UPF0496 protein At5g66675 OS=Arabidopsis thaliana GN=At5g66675 PE=2
SV=1
Length = 412
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/386 (54%), Positives = 300/386 (77%), Gaps = 9/386 (2%)
Query: 4 GQSSKKKGGDAPSPPLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHK 61
SS+ + + P P ++ TD + YSADL+ Y +ACR DPDLQSFD+++ +RT+RVI+
Sbjct: 14 SNSSRNRTNNTPLPQ-QIRTDMGSLYSADLTAYNSACREDPDLQSFDSSLHQRTNRVINS 72
Query: 62 LSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKT 121
L++G + SLSFD+L EV+G LLEMNQEVV+ I+E K+D+W+N+DL LV YF++SIKT
Sbjct: 73 LASGAQTRSLSFDALIEVSGCLLEMNQEVVRFIIESKEDVWDNKDLTCLVNAYFDSSIKT 132
Query: 122 LDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDE---KRYVRTLDELKKFKDAG 178
LDFC ++NC+KRAR Q+++Q A+KQF+ E E +Y +TL+EL KFK +G
Sbjct: 133 LDFCNAVDNCVKRARIGQMLLQFALKQFEMESSGSNKSVEPGTNKYAKTLEELNKFKASG 192
Query: 179 DPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIF 238
DPF +FF+L +SVY+QQV++LE L K+KRKLDKKLK++K W+ +SNV+FV+ FV+VLIF
Sbjct: 193 DPFDGDFFMLLESVYEQQVMLLEILHKQKRKLDKKLKNIKYWKKISNVVFVTAFVSVLIF 252
Query: 239 SVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKI 298
SVVAAA+AAPP+VTALA ALAVPIGS+GKWCN LW YE A+KGQK+++ +M+IGAYV +
Sbjct: 253 SVVAAAVAAPPVVTALAAALAVPIGSIGKWCNHLWKKYETAVKGQKDIVLSMRIGAYVTM 312
Query: 299 MDMDHIRVLVNKLEIQIEALLNNADFALREED---VVKLAIEEIRKRLEVFMETIEVLCD 355
DMD+IRV V+KL+I++E+++ DFAL+E++ V+L++ EI K+ +VF E IE + D
Sbjct: 313 KDMDNIRVHVDKLKIEMESMMQKVDFALKEKEEEVAVRLSMHEISKKFDVFTERIEEVGD 372
Query: 356 HADKCSRDIRRARTVILQKIIKYPNN 381
+A KCS++I ART++L+ I+ +P++
Sbjct: 373 NATKCSKNITLARTIVLRHILSFPSS 398
>sp|Q9SYZ8|U496B_ARATH UPF0496 protein At4g34330 OS=Arabidopsis thaliana GN=At4g34330 PE=3
SV=1
Length = 354
Score = 335 bits (858), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 250/365 (68%), Gaps = 18/365 (4%)
Query: 12 GDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSL 71
G+ S + + Y+ +L YEAAC+ D ++QSFD +Q RTS VI L+ GVEV SL
Sbjct: 2 GNKTSRKSKEKSGRNYTTELRSYEAACKEDMEIQSFDTRMQARTSHVISTLATGVEVRSL 61
Query: 72 SFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENC 131
SFDSLK V GSLL+MNQEV KVIL+CKKDIW NQ++F VE YFETS+KTLDF L+
Sbjct: 62 SFDSLKAVIGSLLDMNQEVAKVILDCKKDIWKNQEMFEFVEAYFETSLKTLDFFNALKRG 121
Query: 132 LKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQS 191
L+ + + L I +D Y +TL ELK+FKDA PF ++FF +FQS
Sbjct: 122 LQGVQINHLFI----------------LDGNGYKKTLQELKRFKDADRPFDQDFFKMFQS 165
Query: 192 VYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLV 251
VY QQ ML++LQ+R+ KLDKKLK ++TWR +S+++F++TF ++I SV+AA +AAP +
Sbjct: 166 VYNQQKWMLDKLQRRQNKLDKKLKRIRTWRKLSSIIFMATFATLVICSVLAATMAAPHVA 225
Query: 252 TALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKL 311
ALA A P+GS+GKW +SLW +YE +KGQ E+ S+M +G YV + D+++I+ L+ +L
Sbjct: 226 AALA-AATPPVGSMGKWIDSLWKNYENEIKGQTEVFSSMYVGTYVAVQDLNNIKDLIKRL 284
Query: 312 EIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVI 371
+ +I ++ NA++A E VK+ I I+ +LEVF + +E L AD CS DIRRARTVI
Sbjct: 285 DTEIRGMVKNAEYA-GELGPVKIGINAIKTQLEVFKKNVEELEIQADMCSTDIRRARTVI 343
Query: 372 LQKII 376
LQ+II
Sbjct: 344 LQRII 348
>sp|Q9LVR3|U496G_ARATH UPF0496 protein At5g66670 OS=Arabidopsis thaliana GN=At5g66670 PE=2
SV=1
Length = 408
Score = 313 bits (801), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/384 (45%), Positives = 256/384 (66%), Gaps = 9/384 (2%)
Query: 1 MMGGQSSKKKGGDAPSPPLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRV 58
++ G SS G S + T+ +QYS+DLS Y +AC+ L+SFD+ + ERT+ +
Sbjct: 10 LIKGHSSSNNNGTNVSLAKTIQTNIRSQYSSDLSSYASACKKYSSLKSFDSLLHERTNSI 69
Query: 59 IHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETS 118
I L+A + SL+ +SL EV G LLE+NQ+ V+VI+E K+D+ N DL LV+ YF+++
Sbjct: 70 ISSLAAQAKTRSLNIESLMEVYGYLLELNQDTVRVIIESKEDVLKNNDLKALVDVYFKST 129
Query: 119 IKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV---ELQEVVDEKRYVRTLDELKKFK 175
KTLDFC +E C+K+A SQLII+ AVKQF+ E +L E +K+YV+TL+E+ KFK
Sbjct: 130 SKTLDFCNTVEKCVKKAEISQLIIRFAVKQFETETVDTDLGES-KKKKYVKTLEEMNKFK 188
Query: 176 DAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAV 235
GDPF EF ++SVY +QVL+L+ L+K K KL KKL+++KTWR++SNV+F + FV V
Sbjct: 189 AMGDPFDGEFVTQYKSVYDEQVLLLDELRKLKVKLGKKLRNIKTWRILSNVVFATAFVTV 248
Query: 236 LIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAY 295
+ SVVAAA+ APP+++A+A L PI VG WCN +W YEKA+K Q+ L+ TM++G
Sbjct: 249 FVLSVVAAAMMAPPVLSAVASGLTTPIEVVGMWCNKMWKEYEKAVKRQRGLVLTMELGVQ 308
Query: 296 VKIMDMDHIRVLVNKLEIQIEALLNNADFAL-REED--VVKLAIEEIRKRLEVFMETIEV 352
+ M +I+ V L I+I ++L +FA+ REE+ + A++EI+K++E F E IE
Sbjct: 309 ANNVTMVNIKFEVENLSIRISSILKTVNFAVDREENEMATRFAMQEIKKKVEGFTEKIEE 368
Query: 353 LCDHADKCSRDIRRARTVILQKII 376
+ + A CS+ I R V+L I+
Sbjct: 369 VGERAANCSKLIALGRLVVLGHIL 392
>sp|Q7XFE1|U496E_ORYSJ Putative UPF0496 protein 5 OS=Oryza sativa subsp. japonica
GN=Os10g0359200 PE=3 SV=2
Length = 423
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 245/326 (75%), Gaps = 1/326 (0%)
Query: 34 YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKV 93
YEAAC DP+L +FD ++ R SR I +++GVEV SLS SL+EVTG LL+MNQEVV+V
Sbjct: 33 YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLSLGSLREVTGCLLDMNQEVVRV 92
Query: 94 ILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV 153
+L+CK+D+W + DLF LVEDYFE S+ TLDF L+ L RAR+SQL++ LA+++ E
Sbjct: 93 VLDCKRDVWRSPDLFDLVEDYFEGSLHTLDFLAALDKSLHRARDSQLVLHLALQRHHHEP 152
Query: 154 ELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKK 213
E Y TL EL++FK AG+PFT+EFF FQ+VY+QQ+ M+ +L++RKR+LD++
Sbjct: 153 PAAASASEL-YASTLGELRQFKAAGEPFTDEFFAAFQTVYRQQMSMVGKLRRRKRRLDRR 211
Query: 214 LKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLW 273
L+S++ WR VS ++F+++F A+L+ SVVAAAIAAPP+ ALA A ++P+GS GKW +SL
Sbjct: 212 LRSVRVWRRVSGIVFLTSFAALLVCSVVAAAIAAPPVAAALAAAASMPVGSAGKWMDSLL 271
Query: 274 NSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVK 333
Y+ AL G KE++S MQ+G ++ I D+D IRVLV LE+QI ++ ++ +FA R+E+ V+
Sbjct: 272 KKYQDALHGHKEVVSAMQVGTFIAIKDLDSIRVLVEHLEVQISSMADSVEFAERDEEAVR 331
Query: 334 LAIEEIRKRLEVFMETIEVLCDHADK 359
I+E++K+LE+FM++++ L + AD+
Sbjct: 332 FGIDEVKKKLELFMKSVDDLGEQADR 357
>sp|Q9LVR4|U496F_ARATH UPF0496 protein At5g66660 OS=Arabidopsis thaliana GN=At5g66660 PE=2
SV=1
Length = 398
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/389 (45%), Positives = 258/389 (66%), Gaps = 8/389 (2%)
Query: 1 MMGGQSSKKKGGDAPSPPLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRV 58
+M G+SS K+ G + P EV TD ++YS+DLS Y +AC+ D +L+SFD+++ +RT+ +
Sbjct: 10 LMNGESSSKRNGPSTLPVKEVRTDMRSKYSSDLSSYTSACKKDSNLKSFDSSLHQRTNII 69
Query: 59 IHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETS 118
I L+A E SL+ DSL EV G LLE+NQ V+VI+E ++D+W N+DL LV+ YF+++
Sbjct: 70 ITSLAARAETQSLNLDSLMEVYGFLLELNQNAVRVIIESREDVWKNKDLKSLVDVYFKST 129
Query: 119 IKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEE---VELQEVVDEKRYVRTLDELKKFK 175
KTLDFC +ENC+KR SQLII+ AVKQF+ E +L +K+Y +TL+EL KFK
Sbjct: 130 SKTLDFCNTVENCVKRTEISQLIIRFAVKQFEAESVDTDLGGDKKKKKYTKTLEELNKFK 189
Query: 176 DAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAV 235
GDPF E F SVY QQVL LE L+K++RKLDKK +++KT R VSNV F + +V+V
Sbjct: 190 AMGDPFDGELVTQFDSVYDQQVLFLEELRKQRRKLDKKQRNVKTLRTVSNVFFATAYVSV 249
Query: 236 LIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAY 295
L+ SVVA ++APP+V A+A PI GKW + +W YEKA+K Q+ L+ TM+
Sbjct: 250 LVLSVVATTMSAPPVVCAVASGSTAPIEITGKWFSQMWKKYEKAVKRQRGLVLTMESRVQ 309
Query: 296 VKIMDMDHIRVLVNKLEIQIEALLNNADFAL---REEDVVKLAIEEIRKRLEVFMETIEV 352
V M +IR V++L + ++L DFA+ EE+ + LA++ I+K ++ F E +E
Sbjct: 310 VNNEAMKNIRSDVDELRSWVSSILETVDFAVEREEEEEAMGLAMQGIKKHVDGFTEKMEE 369
Query: 353 LCDHADKCSRDIRRARTVILQKIIKYPNN 381
+ ++A KCS+ I R ++L+ I+ P N
Sbjct: 370 VGENAAKCSKFIALGRLLVLEHILGLPAN 398
>sp|A2Z6C5|U496E_ORYSI Putative UPF0496 protein 5 OS=Oryza sativa subsp. indica
GN=OsI_032118 PE=3 SV=1
Length = 428
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/327 (50%), Positives = 242/327 (74%), Gaps = 1/327 (0%)
Query: 34 YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKV 93
YEAAC DP+L +FD ++ R SR I +++GVEV SLS SL+EVTG LL+MNQEVV+V
Sbjct: 36 YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLSLGSLREVTGCLLDMNQEVVRV 95
Query: 94 ILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV 153
+L CK+D+W + DLF LVEDYFE S+ TLDF L+ L RAR+SQL++ LAV++ E
Sbjct: 96 VLACKRDVWRSPDLFDLVEDYFEGSLHTLDFLAALDKSLHRARDSQLVLHLAVQRHHHEP 155
Query: 154 ELQEVVDEKR-YVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDK 212
Y TL EL++FK AG+PFT+EFF FQ+VY+QQ+ M+ +L++RKR+LD+
Sbjct: 156 PAAAAASASELYASTLGELRQFKAAGEPFTDEFFAAFQTVYRQQMSMVGKLRRRKRRLDR 215
Query: 213 KLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSL 272
+L+S++ WR VS ++F++ F A+L+ SVVAAAIAAPP+ ALA A ++P+GS GKW +SL
Sbjct: 216 RLRSVRVWRRVSGIVFLTAFAALLVCSVVAAAIAAPPVAAALAPAASMPVGSAGKWMDSL 275
Query: 273 WNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVV 332
Y+ AL G KE++S MQ+G ++ I D+D IRVLV LE+QI ++ ++ +FA R+E+ V
Sbjct: 276 LKKYQDALHGHKEVVSAMQVGTFIAIKDLDSIRVLVEHLEVQISSMADSVEFAERDEEAV 335
Query: 333 KLAIEEIRKRLEVFMETIEVLCDHADK 359
+ I+E++K+LE+FM++++ L + AD+
Sbjct: 336 RFGIDEVKKKLELFMKSVDDLGEQADR 362
>sp|P0DI79|U496P_ARATH UPF0496 protein At3g28300 OS=Arabidopsis thaliana GN=At3g28300 PE=2
SV=1
Length = 385
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 190/373 (50%), Gaps = 25/373 (6%)
Query: 26 QYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFD---SLKEVTGS 82
+YSA L Y +AC P+L+SFD+ +Q++TS +I+ ++ + + + KE T
Sbjct: 10 KYSAHLRAYNSACGDHPELKSFDSELQQKTSNLINSFTSDAKTGLVPLPQHAAYKEFTKH 69
Query: 83 LLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLII 142
L E+NQ+V I+ + +W N L LVE YFE++ KTLD + + A+ + I
Sbjct: 70 LAEVNQQVSDYIIGYGEVVWENSTLRSLVETYFESAKKTLDIAENVTEYVDEAKRGERYI 129
Query: 143 QLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPF-TEEFFVLFQSVYKQQVLMLE 201
AV QF+++ E KRY TL ELKKF+ G+PF ++F LF+ ++K+Q +LE
Sbjct: 130 VAAVAQFEKDKENDVGKKTKRYENTLRELKKFEAMGNPFDGDKFTTLFKLMHKEQESLLE 189
Query: 202 RLQKRKRKLDKKLK-------SMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTAL 254
R+++ K KLD++LK S K W ++SNVLF+ FVAV + S+V V
Sbjct: 190 RVRETKEKLDEELKNIEMEISSRKKWSIISNVLFIGAFVAVAVGSMVLVCTGVGAGVGVA 249
Query: 255 AGALAVPIGSVGKWCN---------SLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIR 305
L++P+ ++G W E+ALK + + M G +DM+ I
Sbjct: 250 G-LLSLPLIAIG-WVGVHTILENKIQAREKQEEALKKAHRIANEMDKGMETDKVDMNSIS 307
Query: 306 VLVNKLEIQIEALLNNADFALRE---EDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSR 362
V+ L+ +I ++LN A + E K +E + + E I+ + D K S+
Sbjct: 308 GKVHALKSKITSMLNAVKDATEDGANEVDTKQVMETLTGDVVELTEDIKAVGDDVAKYSK 367
Query: 363 DIRRARTVILQKI 375
I +LQKI
Sbjct: 368 MIEETSYHVLQKI 380
>sp|P0DI78|U496D_ARATH UPF0496 protein At3g28290 OS=Arabidopsis thaliana GN=At3g28290 PE=2
SV=1
Length = 385
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 190/373 (50%), Gaps = 25/373 (6%)
Query: 26 QYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFD---SLKEVTGS 82
+YSA L Y +AC P+L+SFD+ +Q++TS +I+ ++ + + + KE T
Sbjct: 10 KYSAHLRAYNSACGDHPELKSFDSELQQKTSNLINSFTSDAKTGLVPLPQHAAYKEFTKH 69
Query: 83 LLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLII 142
L E+NQ+V I+ + +W N L LVE YFE++ KTLD + + A+ + I
Sbjct: 70 LAEVNQQVSDYIIGYGEVVWENSTLRSLVETYFESAKKTLDIAENVTEYVDEAKRGERYI 129
Query: 143 QLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPF-TEEFFVLFQSVYKQQVLMLE 201
AV QF+++ E KRY TL ELKKF+ G+PF ++F LF+ ++K+Q +LE
Sbjct: 130 VAAVAQFEKDKENDVGKKTKRYENTLRELKKFEAMGNPFDGDKFTTLFKLMHKEQESLLE 189
Query: 202 RLQKRKRKLDKKLK-------SMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTAL 254
R+++ K KLD++LK S K W ++SNVLF+ FVAV + S+V V
Sbjct: 190 RVRETKEKLDEELKNIEMEISSRKKWSIISNVLFIGAFVAVAVGSMVLVCTGVGAGVGVA 249
Query: 255 AGALAVPIGSVGKWCN---------SLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIR 305
L++P+ ++G W E+ALK + + M G +DM+ I
Sbjct: 250 G-LLSLPLIAIG-WVGVHTILENKIQAREKQEEALKKAHRIANEMDKGMETDKVDMNSIS 307
Query: 306 VLVNKLEIQIEALLNNADFALRE---EDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSR 362
V+ L+ +I ++LN A + E K +E + + E I+ + D K S+
Sbjct: 308 GKVHALKSKITSMLNAVKDATEDGANEVDTKQVMETLTGDVVELTEDIKAVGDDVAKYSK 367
Query: 363 DIRRARTVILQKI 375
I +LQKI
Sbjct: 368 MIEETSYHVLQKI 380
>sp|Q9LHD9|U496C_ARATH UPF0496 protein At3g28270 OS=Arabidopsis thaliana GN=At3g28270 PE=2
SV=1
Length = 374
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 201/360 (55%), Gaps = 18/360 (5%)
Query: 31 LSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLS-FDSLKEVTGSLLEMNQE 89
+S Y++AC P L+SFDA++Q+RT+++I L+ + S S D+ E++ L+E+ Q
Sbjct: 16 MSAYKSACEEHPKLKSFDASLQQRTNKMIDSLTVEDKNGSSSPHDAHMELSKHLVEVTQG 75
Query: 90 VVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQF 149
V I E + D+W+NQ L LV YFE + KTL+ +ENC++ A QL+I+ A+ +F
Sbjct: 76 VADFITEIEDDVWDNQALKYLVLAYFENTKKTLEIFKTIENCVENAEMGQLLIREALAEF 135
Query: 150 DEEVELQEVVD-EKRYVRTLDELKKFKDAGDPFTEEFFVL-FQSVYKQQVLMLERLQKRK 207
++E ++V +K+Y +TL++LK FK+ GDPF + F+ + KQQ +LE + + +
Sbjct: 136 EKESAEKDVGGKKKKYEKTLEDLKSFKEMGDPFDGKVLTTQFERIKKQQESLLEEVSETR 195
Query: 208 RKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGK 267
+K+ ++ +++ +++NV+F + F V + S+ A IA A GALA P+ + G
Sbjct: 196 KKIQDEISNLEKKTLITNVVFGAAFAIVAVASI--ALIATGVGAAAGFGALAAPLLAAG- 252
Query: 268 WCN---------SLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEAL 318
W N + LK +E+ +++ G + + +LV+ LE +I+ +
Sbjct: 253 WAGVYTTLDKKKDALNKQLEGLKKVEEIEESVEKGIKTNEEATETVSILVDGLEDRIKNM 312
Query: 319 LNNADFALREED---VVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKI 375
L D A+ ED ++ + +I K++E + I + + + S+ I +AR +LQKI
Sbjct: 313 LKLVDNAIDHEDNEAATRIVLTQISKKVEKLTKKITEVGESVEDHSKLIAKARLQVLQKI 372
>sp|Q6E240|U496E_ARATH UPF0496 protein At3g28310/At3g28320 OS=Arabidopsis thaliana
GN=At3g28310/At3g28320 PE=2 SV=3
Length = 384
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 198/376 (52%), Gaps = 29/376 (7%)
Query: 25 AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSL-KEVTG-S 82
++YS + Y AAC PDL+SFD+ IQ+RTS +I L+ + S+S ++ KEV
Sbjct: 9 SRYSEHVDAYRAACGHHPDLKSFDSKIQQRTSNLIDSLTVEAKTGSVSPHAVHKEVIDIH 68
Query: 83 LLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLII 142
L+E+++ V VI EC +++W N L LV+DYF ++++TL + C+ A+ Q I
Sbjct: 69 LVEVSKAVADVITECGEEVWENGTLQSLVKDYFNSTMETLKIFETVTQCVHEAKRGQRYI 128
Query: 143 QLAVKQFDEEVELQEV-VDEKRYVRTLDELKKFKDAGDPFTEEFF-VLFQSVYKQQVLML 200
+ AV QF ++ E ++V V +KRY +TL+EL KFK G+PF + F+ + KQQ +
Sbjct: 129 KAAVAQFKKDSEEKDVGVKKKRYGKTLEELMKFKAMGNPFDDGLLKTQFELMNKQQESLF 188
Query: 201 ERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAV 260
+R+ + K ++ K+++ ++ + +SNV +T V+ ++F A AA + G +
Sbjct: 189 DRVTETKERIAKEIEEVQ--KRISNV-NTATIVSHVVFGAAAFGYAAGCIALMCTG-VGA 244
Query: 261 PIGS---------VGKWCN---SLWNSYE------KALKGQKELMSTMQIGAYVKIMDMD 302
P+G+ V +W L NS E KAL K + + G M
Sbjct: 245 PLGAGMVTLLPVIVVQWVGVNYVLNNSLEALQKQLKALNKVKPIPERITEGMEADKEGMK 304
Query: 303 HIRVLVNKLEIQIEALLNNADFALREED---VVKLAIEEIRKRLEVFMETIEVLCDHADK 359
+ V++L+ QI +LL D A+ E VKL +E + ++ I +C+ K
Sbjct: 305 SVPEQVDELKDQISSLLQTVDDAIGSEGDEVDVKLDMESLEDDVKTLTTKITEVCETVAK 364
Query: 360 CSRDIRRARTVILQKI 375
S+ I+ AR +L+KI
Sbjct: 365 YSKIIKEARLHVLEKI 380
>sp|Q9M1J0|U496O_ARATH UPF0496 protein At3g57100 OS=Arabidopsis thaliana GN=At3g57100 PE=2
SV=1
Length = 359
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 166/325 (51%), Gaps = 31/325 (9%)
Query: 68 VHSLSFDSLKEVTGSLLEMNQEVVKVILECKK-DIWNNQDLFGLVEDYFETSIKTLDFCT 126
+ S S D+L ++ + M+++V K+ +E ++ D+ + DLF L+ YF TS C
Sbjct: 43 LRSRSEDNLNKLGECMDNMDEDVSKLFIEFQQTDLREDPDLFRLLNHYFTTSKGVSQLCE 102
Query: 127 VLENCLKRARNSQ-LIIQLAVKQFD-EEVELQEVVDEKRYVRTLDELKKFK-----DAG- 178
L CL+R+ N++ L++ A+ F+ E++ ++E + +T +L+ F ++G
Sbjct: 103 SLRTCLERSENNECLLLDEALVDFELEKLGYGGSLEEASFRKTYRDLRNFNAFYNNNSGE 162
Query: 179 --DPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVL 236
D EF FQ+ +++ M+ +L+K + +DKKL+ ++ R + ++ +AV+
Sbjct: 163 EDDLDYCEFLRKFQTCHEELAKMVVKLEKTMKDIDKKLRRVRGRRAIVTAALLAPVIAVI 222
Query: 237 IFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYV 296
S + A + VPI + + S W ++LK +K MS+M+ G V
Sbjct: 223 FLSKLVAGL--------------VPIEGLSTFVASRWRKSTESLKREKTAMSSMERGIIV 268
Query: 297 KIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLA---IEEIRKRLEVFMETIEVL 353
+ ++ I LV++LE ++ A+FA+++ V +A +EE RKRL+ T+ L
Sbjct: 269 ALKQVEKISKLVSRLESVERSISLTAEFAVKKRSSVVVAMREVEEERKRLK---STLVDL 325
Query: 354 CDHADKCSRDIRRARTVILQKIIKY 378
C+ + RTV L+KI ++
Sbjct: 326 DRETGLCNGFAQFGRTVALEKITEF 350
>sp|Q9SMN4|U496J_ARATH UPF0496 protein At3g48650 OS=Arabidopsis thaliana GN=At3g48650 PE=2
SV=1
Length = 277
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 10/214 (4%)
Query: 141 IIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLML 200
++++ F+ E + +Y TL++L K K GD F +EF ++++Y + ++L
Sbjct: 40 LMEIKRSPFERESRDTDFGGNNKYAGTLEKLNKVKALGDLFGDEFTTQYKAIYDEHQMLL 99
Query: 201 ERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAV 260
+ + + +KK K+ K + + + F + ++VL + A++ LV A + V
Sbjct: 100 NKSHHMQLEHEKKHKNDKKSKRLGYIFFAAALLSVLALWIYLGAVS---LVVAAKVVIEV 156
Query: 261 PIGSVG---KWCNSLWNSYEK--ALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQI 315
S+ KW + E A K +L +M A + I + LV L +I
Sbjct: 157 ATPSIAPLWKWVTEILEDSESEIAYKKLTDLFRSMDKNANLNIEFAKTFKSLVETLLTRI 216
Query: 316 EALLNNADFAL--REEDVVKLAIEEIRKRLEVFM 347
+ +L D+A+ REE+ VKL ++ + L+V +
Sbjct: 217 KPILETVDYAVEQREEETVKLVSKKSLRILKVLL 250
>sp|Q337C0|U496D_ORYSJ UPF0496 protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0513300
PE=2 SV=1
Length = 456
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 139/353 (39%), Gaps = 46/353 (13%)
Query: 33 LYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVK 92
++ L LQ A+ ++ + + KL L+ ++ L E++ +
Sbjct: 21 MFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVLTLSWMRLAVDCLSELHTNIAN 80
Query: 93 VI--LECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFD 150
+I LE W+++ V+ Y +S+K LD C L + L R QL++Q A+
Sbjct: 81 LITDLELPVSDWDDK----WVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYAL---- 132
Query: 151 EEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKL 210
V+ + V + ++LK+ +P E+ L + V LQ+ L
Sbjct: 133 ------HVLGSESGVPSQEQLKR----AEPSLREWMELVGVRCARLVSCSATLQELAGNL 182
Query: 211 D-KKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAP--PLVTALAGALAVP--IGSV 265
K+K+ +++ L+ V V + S+ A ++ PLV L VP G
Sbjct: 183 SLMKVKNSAKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVE-----LHVPEKFG-- 235
Query: 266 GKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFA 325
W + +N A+ +EL + G+ + +++ + +L + A +
Sbjct: 236 --WSQA-FNDLHTAVS--EELTRQLSGGSVAAVKELEEVEACARRLHVL-------ASTS 283
Query: 326 LREEDVVKLAIEEIRKRLEVFMETIEVLCDH--ADKCSRDIRRARTVILQKII 376
EE+ LA EV ++I DH K + D R +++ + I
Sbjct: 284 QLEEEAANLANAVSHTEEEVMSDSIAQEGDHHCGLKLADDTTREGGIVISESI 336
>sp|Q65VB8|DNAA_MANSM Chromosomal replication initiator protein DnaA OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=dnaA PE=3 SV=1
Length = 457
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 146 VKQFDEEVELQEVVDEKRYVRTLDELK----KFKDAGDPFTEEFFVLFQSVY---KQQVL 198
V+++ + ++ + + + K++ R+LD L +F D EEFF F S++ KQ +L
Sbjct: 197 VQEYVKALKAERIENFKKFYRSLDALLIDDIQFFAGKDGTQEEFFNTFNSLFEGEKQIIL 256
Query: 199 MLERLQKRKRKLDKKLKSMKTWRM 222
+R + K+D +LKS +W +
Sbjct: 257 TSDRYPREIEKIDDRLKSRFSWGL 280
>sp|Q9LMM6|BPS1_ARATH Protein BPS1, chloroplastic OS=Arabidopsis thaliana GN=BPS1 PE=2
SV=1
Length = 349
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 37 ACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILE 96
+ +L P L +F+ + S+++ K + + L+ +K+ SL E + + +I +
Sbjct: 29 SSKLLPLLNNFETNLASSISKLVPKEKSDI----LTVSWMKQAMESLCETHNGIKTLITD 84
Query: 97 CKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQ 156
+ + + +D + V+ Y + S+K LD C + L R L++Q A+ +E
Sbjct: 85 LELPVSDWEDKW--VDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFAL----HNLEAN 138
Query: 157 EVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKR 208
+ + +LD K+ + +P E + S+ Q L L +++ +
Sbjct: 139 SPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLV--QTLNLPKVKNSAK 188
>sp|A2Z9A6|U496D_ORYSI UPF0496 protein 4 OS=Oryza sativa subsp. indica GN=OsI_033149 PE=3
SV=2
Length = 456
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 21/220 (9%)
Query: 33 LYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVK 92
++ L LQ A+ ++ + + KL L+ ++ L E++ +
Sbjct: 21 MFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVLTLSWMRLAVDCLSELHTNIAN 80
Query: 93 VI--LECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFD 150
+I LE W+++ V+ Y +S+K LD C L + L R QL++Q A+
Sbjct: 81 LITDLELPVSDWDDK----WVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYAL---- 132
Query: 151 EEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKL 210
V+ + V + ++LK+ +P E+ L + V LQ+ L
Sbjct: 133 ------HVLGSESGVPSQEQLKR----AEPSLREWMELVGVRCPRLVSCSATLQELAGNL 182
Query: 211 D-KKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPP 249
K+K+ +++ L+ V V + S+ A ++ P
Sbjct: 183 SLMKVKNSVKGKVLMRALYGIESVTVFVCSIFVAVLSGSP 222
>sp|Q9LJK4|U496L_ARATH UPF0496 protein At3g19250 OS=Arabidopsis thaliana GN=At3g19250 PE=2
SV=1
Length = 360
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 114/283 (40%), Gaps = 32/283 (11%)
Query: 107 LFGLVEDYFETSIKTLDFCTVLENCLKRAR---NSQLIIQLAVKQFDEEVELQEVVDEKR 163
L LV YF+ S FC L + AR + L+ + D +DE
Sbjct: 95 LTNLVSTYFQHSEDATRFCLNLYQNVHSARCHLYTPLLDLFNIFPRDS----HSAIDESF 150
Query: 164 YVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMV 223
D K +PF FQ + ++L R RK +++ +
Sbjct: 151 CNLAFDVFLKLDTFENPFASPESHSFQDTQLCFYQLADKLDTRIRKSKSRVRLLH-HATA 209
Query: 224 SNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQ 283
+ L + T V V+ S A A P + +AG L P L +S++K
Sbjct: 210 GSALCLVTAVVVVAASAAFIAYHALPTILVVAGPLCTPY---------LPHSFKK----- 255
Query: 284 KELMSTMQI-----GAYVKIMDMDHIRVLVNKLEIQI--EALLNNADFALREEDVVKLA- 335
KEL + Q+ G + D+D I LV++L + + LL R DV +
Sbjct: 256 KELSNIFQLNVAAKGTFALNKDLDTIDRLVSRLHTGVKNDKLLIRLGLE-RGRDVYTIPE 314
Query: 336 -IEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIK 377
++++RK +EVL DH + ++ ++R+++L++I++
Sbjct: 315 FVKQLRKSHVNHTHQLEVLVDHICRWFTNVNKSRSLLLKEILR 357
>sp|A6VR65|DNAA_MARMS Chromosomal replication initiator protein DnaA OS=Marinomonas sp.
(strain MWYL1) GN=dnaA PE=3 SV=1
Length = 516
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 23 TDAQYSADLSLYEAACR--LDPDLQS-FDATIQERTSRVIHKLSAGVEVH-SLSFDSLKE 78
D ++ A L+L R L+P Q T +R +V ++ G ++ S +FD+
Sbjct: 133 ADLEFEAPLTLSGTGLRGELEPYEQGQLPLTAPKRKVQVEGGINHGANLNNSFTFDNF-- 190
Query: 79 VTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNS 138
+ G ++ + E +N ++G V + + + R +
Sbjct: 191 IEGKSNQLAHAAALQVAENPGGAYNPLFIYGGV------GLGKTHLMQAVGTEMMRHNPN 244
Query: 139 QLIIQLAVKQFDEE----VELQEVVDEKRYVRTLDELK----KFKDAGDPFTEEFFVLFQ 190
++ L ++F + ++L + D KRY R++D L +F D EEFF F
Sbjct: 245 AKVVYLHSERFVADMVKALQLNAINDFKRYYRSVDALLIDDIQFFAGKDRTQEEFFHTFN 304
Query: 191 SVY---KQQVLMLERLQKRKRKLDKKLKSMKTWRMV 223
++ +Q +L +R K + L+ +LKS W +
Sbjct: 305 ALLEGGQQMILTCDRYPKEIQGLEDRLKSRFGWGLT 340
>sp|Q6DYE5|U496K_ARATH UPF0496 protein At1g20180 OS=Arabidopsis thaliana GN=At1g20180 PE=2
SV=2
Length = 390
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 132/308 (42%), Gaps = 22/308 (7%)
Query: 80 TGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQ 139
T LL+ QE + +++ + L L+ +F+ S + D C L CL++ + +
Sbjct: 88 TDYLLDPPQETLDALMQ-------DSSLDNLIVTFFDLSSEACDVCETLLQCLQQIKINH 140
Query: 140 LIIQLAV---KQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFF-VLFQSVYKQ 195
I+ + K+ + E E EL +F +P F+ V+
Sbjct: 141 NKIKRVMKIGKRVCNGAKTLECSPEMLCALIFQELSRFAALKNPLCRIVNEAQFRIVHDA 200
Query: 196 QVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAA------AIAAPP 249
+L +L +KR++ +K++ K + + V T A++I ++ A AAP
Sbjct: 201 NSDLLTKLTSKKRRIRRKIRFFKFCKKLGGYSLVITHSAIVITLLIIALHSILGVFAAPA 260
Query: 250 LVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVN 309
L+ + L + G+ S ++ + L Q ++ + G ++ I D+D + L
Sbjct: 261 LLGLCSFCLLRKKKAKGRMHKSNKDTTLEKLGTQIDIAAK---GMFILINDLDTLSRLAG 317
Query: 310 KLEIQIEALLNNADFAL--REEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRA 367
+L +IE A R+ +V+K A+ E E F + ++ L +H C I R+
Sbjct: 318 RLCDEIEHRKTVAAMCAKSRKIEVLKEALREFNGHEEKFSDQLQELEEHLYLCFHTINRS 377
Query: 368 RTVILQKI 375
R ++L +I
Sbjct: 378 RRLVLAQI 385
>sp|B4UIA9|NUOD2_ANASK NADH-quinone oxidoreductase subunit D 2 OS=Anaeromyxobacter sp.
(strain K) GN=nuoD2 PE=3 SV=1
Length = 431
Score = 35.4 bits (80), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 315 IEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDH 356
+ +++NN FAL E + KL I E + L V I +CDH
Sbjct: 110 VSSIMNNVGFALAVEKLAKLEIPERARYLRVITSEIHRICDH 151
>sp|Q2IL06|NUOD1_ANADE NADH-quinone oxidoreductase subunit D 1 OS=Anaeromyxobacter
dehalogenans (strain 2CP-C) GN=nuoD1 PE=3 SV=2
Length = 430
Score = 35.4 bits (80), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 315 IEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDH 356
+ +++NN FAL E + KL I E + L V I +CDH
Sbjct: 109 VSSIMNNVGFALAVEKLAKLEIPERARYLRVITSEIHRICDH 150
>sp|A7H9V5|NUOD2_ANADF NADH-quinone oxidoreductase subunit D 2 OS=Anaeromyxobacter sp.
(strain Fw109-5) GN=nuoD2 PE=3 SV=1
Length = 431
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 315 IEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDH 356
+ +++NN FAL E + KL + E K L V I +CDH
Sbjct: 110 VSSIMNNVGFALAVEKLCKLDVPERAKYLRVVTSEIHRICDH 151
>sp|Q21PW4|DNAA_SACD2 Chromosomal replication initiator protein DnaA OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dnaA
PE=3 SV=1
Length = 524
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 153 VELQEVVDEKRYVRTLDELK----KFKDAGDPFTEEFFVLFQSVY---KQQVLMLERLQK 205
++L + D KRY R++D L +F + EEFF F ++ +Q +L +R K
Sbjct: 271 LQLNAINDFKRYYRSVDALLIDDIQFFAGKERSQEEFFHTFNALLEGGQQIILTCDRYPK 330
Query: 206 RKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAP 248
L+++LKS W + + V I A + AP
Sbjct: 331 EINGLEERLKSRFGWGLTVAIEPPELETRVAILKRKAEQVGAP 373
>sp|C6A2Y3|Y920_THESM UPF0200 protein TSIB_0920 OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=TSIB_0920 PE=3 SV=1
Length = 190
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 132 LKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQS 191
L++ + +LA+ + E ++ E V + VR+LDE++ FKDA F EE ++ +
Sbjct: 57 LRQELGDNAVAKLAIPKVRELLKTHEAVIIE-GVRSLDEIQAFKDA---FPEEKVIII-A 111
Query: 192 VYKQQVLMLERLQKRKRKLDKKLKS---MKTWR----MVSNVLFVSTFVAV 235
V+ ERL KR R D K S + W+ + NV+ ++ ++ V
Sbjct: 112 VHSSPQKRFERLSKRGRSDDPKSWSEFEARDWKELKFGLGNVIALADYLIV 162
>sp|Q9CLQ4|DNAA_PASMU Chromosomal replication initiator protein DnaA OS=Pasteurella
multocida (strain Pm70) GN=dnaA PE=3 SV=1
Length = 451
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 162 KRYVRTLDELK----KFKDAGDPFTEEFFVLFQSVY---KQQVLMLERLQKRKRKLDKKL 214
K++ R+LD L +F + EEFF +F +++ +Q +L +R K KL+++L
Sbjct: 207 KKFYRSLDALLVDDIQFFAEKEKTQEEFFHIFNNLFDTGRQIILTSDRYPKEIEKLEERL 266
Query: 215 KSMKTWRMVSNV--LFVSTFVAVLIFSVVAAAIAAPPLVTALAG 256
KS W + + + + T VA+L+ I P V G
Sbjct: 267 KSRFGWGLTTAIEPPELETRVAILLKKAEEKNIYLPEEVAFFIG 310
>sp|P43742|DNAA_HAEIN Chromosomal replication initiator protein DnaA OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=dnaA PE=3 SV=1
Length = 454
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 162 KRYVRTLDELK----KFKDAGDPFTEEFFVLFQSVY---KQQVLMLERLQKRKRKLDKKL 214
K++ R+LD L +F + EEFF +F S++ +Q +L +R K K++++L
Sbjct: 211 KKFYRSLDALLVDDIQFFAEKEKTQEEFFHIFNSLFETGRQIILTSDRYPKEIEKIEERL 270
Query: 215 KSMKTWRMVSNV 226
KS W + + +
Sbjct: 271 KSRFGWGLTTAI 282
>sp|Q6PDS3|SARM1_MOUSE Sterile alpha and TIR motif-containing protein 1 OS=Mus musculus
GN=Sarm1 PE=1 SV=1
Length = 724
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 86 MNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLA 145
+ +EV + IL C W ++ +T ++ + F EN ++ + L+++L
Sbjct: 397 LGEEVPRRILPCVAS-WKEAEV--------QTWLQQIGFSQYCENFREQQVDGDLLLRLT 447
Query: 146 VKQFDEEVELQEVVDEKRYVRTLDELKKF 174
++ ++ ++ + KR+ R L ELK F
Sbjct: 448 DEELQTDLGMKSSITRKRFFRELTELKTF 476
>sp|Q9SMU4|U496N_ARATH UPF0496 protein At3g49070 OS=Arabidopsis thaliana GN=At3g49070 PE=2
SV=1
Length = 416
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 293 GAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRL----EVFME 348
G Y+ D+D I LV ++ ++ + A+F + EE+ + L E F E
Sbjct: 311 GTYILSRDLDTISRLVTRINDEVNHVRAMAEFWVGRGSGRVRGSEEVARELKRCEESFSE 370
Query: 349 TIEVLCDHADKCSRDIRRARTVILQKII 376
++ L +H C I RAR +++++I+
Sbjct: 371 ELDELEEHIYLCFMTINRARNLLVKEIL 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,132,899
Number of Sequences: 539616
Number of extensions: 4976420
Number of successful extensions: 19531
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 19458
Number of HSP's gapped (non-prelim): 86
length of query: 381
length of database: 191,569,459
effective HSP length: 119
effective length of query: 262
effective length of database: 127,355,155
effective search space: 33367050610
effective search space used: 33367050610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)