Query 016882
Match_columns 381
No_of_seqs 249 out of 2850
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 03:39:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016882.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016882hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 4.5E-31 9.7E-36 246.1 30.8 309 48-367 7-328 (485)
2 KOG0254 Predicted transporter 100.0 6.9E-29 1.5E-33 240.9 30.1 305 49-367 42-352 (513)
3 TIGR01299 synapt_SV2 synaptic 100.0 8.1E-29 1.8E-33 245.0 30.6 273 48-337 163-474 (742)
4 TIGR00887 2A0109 phosphate:H+ 100.0 2.5E-27 5.4E-32 229.8 27.3 276 50-341 14-321 (502)
5 COG2271 UhpC Sugar phosphate p 100.0 2.5E-28 5.5E-33 218.5 18.2 287 47-371 24-315 (448)
6 TIGR00879 SP MFS transporter, 100.0 2.5E-26 5.4E-31 221.1 31.2 308 49-367 25-342 (481)
7 PRK10077 xylE D-xylose transpo 100.0 6.4E-26 1.4E-30 219.0 31.9 297 51-365 11-327 (479)
8 COG2814 AraJ Arabinose efflux 100.0 1.3E-26 2.8E-31 210.2 24.8 254 53-365 14-268 (394)
9 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.6E-26 7.8E-31 216.1 26.7 286 51-365 7-300 (412)
10 PRK11663 regulatory protein Uh 99.9 3.6E-25 7.9E-30 210.9 23.2 270 55-367 26-302 (434)
11 PRK10642 proline/glycine betai 99.9 2.7E-24 5.9E-29 207.9 28.1 268 53-364 17-306 (490)
12 TIGR00898 2A0119 cation transp 99.9 2.9E-24 6.4E-29 208.8 26.3 264 73-365 110-376 (505)
13 PRK11551 putative 3-hydroxyphe 99.9 6.8E-24 1.5E-28 200.6 27.8 264 49-365 12-276 (406)
14 TIGR00891 2A0112 putative sial 99.9 8.3E-24 1.8E-28 199.5 27.5 183 51-240 11-194 (405)
15 PRK12307 putative sialic acid 99.9 9.2E-24 2E-28 200.9 27.6 268 54-365 20-287 (426)
16 PRK10406 alpha-ketoglutarate t 99.9 8.9E-24 1.9E-28 201.3 27.0 183 53-239 23-223 (432)
17 TIGR00894 2A0114euk Na(+)-depe 99.9 7.5E-24 1.6E-28 203.8 26.6 282 51-365 18-318 (465)
18 PRK03545 putative arabinose tr 99.9 6.1E-24 1.3E-28 199.8 25.2 242 62-365 19-262 (390)
19 PRK10213 nepI ribonucleoside t 99.9 1.2E-23 2.6E-28 197.8 27.0 234 70-365 38-273 (394)
20 KOG2533 Permease of the major 99.9 3.5E-24 7.5E-29 202.7 22.9 291 44-370 37-335 (495)
21 TIGR00895 2A0115 benzoate tran 99.9 8.9E-24 1.9E-28 198.7 25.1 286 55-365 20-306 (398)
22 KOG1330 Sugar transporter/spin 99.9 1.9E-26 4.1E-31 208.5 6.3 274 50-370 31-309 (493)
23 PRK14995 methyl viologen resis 99.9 3.9E-23 8.4E-28 200.0 29.1 180 51-238 5-186 (495)
24 PRK09556 uhpT sugar phosphate 99.9 3.1E-24 6.6E-29 206.4 19.4 281 50-367 27-317 (467)
25 TIGR00903 2A0129 major facilit 99.9 6.4E-24 1.4E-28 197.2 20.6 233 70-360 9-242 (368)
26 KOG2532 Permease of the major 99.9 4.6E-23 9.9E-28 194.6 26.0 251 88-373 67-323 (466)
27 PRK15403 multidrug efflux syst 99.9 3.1E-23 6.7E-28 196.1 23.5 176 55-238 19-195 (413)
28 PF00083 Sugar_tr: Sugar (and 99.9 3E-29 6.6E-34 240.3 -18.0 293 57-365 5-307 (451)
29 PRK09705 cynX putative cyanate 99.9 1.4E-22 3E-27 190.6 27.5 237 69-367 26-263 (393)
30 PLN00028 nitrate transmembrane 99.9 1.4E-22 3E-27 195.1 27.8 256 63-368 47-312 (476)
31 PRK15075 citrate-proton sympor 99.9 1.5E-22 3.2E-27 193.0 25.9 256 54-365 17-295 (434)
32 TIGR00893 2A0114 d-galactonate 99.9 3.5E-23 7.6E-28 194.1 20.8 268 62-366 4-273 (399)
33 PRK09952 shikimate transporter 99.9 3.8E-22 8.1E-27 190.3 28.0 181 53-240 23-225 (438)
34 TIGR00711 efflux_EmrB drug res 99.9 1.7E-22 3.8E-27 195.4 25.0 291 54-365 4-312 (485)
35 PRK11273 glpT sn-glycerol-3-ph 99.9 1.5E-22 3.3E-27 193.9 23.2 177 55-240 32-214 (452)
36 PRK10091 MFS transport protein 99.9 4.8E-22 1E-26 186.4 24.4 174 56-237 7-181 (382)
37 TIGR00881 2A0104 phosphoglycer 99.9 2.6E-23 5.6E-28 194.1 14.7 268 60-365 3-273 (379)
38 KOG0255 Synaptic vesicle trans 99.9 1.7E-22 3.7E-27 197.0 21.0 218 89-319 113-333 (521)
39 TIGR00710 efflux_Bcr_CflA drug 99.9 4.2E-22 9.1E-27 186.7 22.3 247 62-365 15-263 (385)
40 PRK03699 putative transporter; 99.9 2.3E-21 4.9E-26 182.6 27.1 170 56-232 11-180 (394)
41 TIGR00890 2A0111 Oxalate/Forma 99.9 4E-22 8.7E-27 185.9 21.6 242 68-365 19-261 (377)
42 TIGR00712 glpT glycerol-3-phos 99.9 4.3E-22 9.3E-27 190.0 22.0 277 52-366 27-309 (438)
43 PRK03893 putative sialic acid 99.9 4.1E-21 8.9E-26 186.4 27.7 181 52-240 20-200 (496)
44 TIGR00900 2A0121 H+ Antiporter 99.9 1.2E-21 2.6E-26 182.0 21.4 254 62-365 9-268 (365)
45 PRK11043 putative transporter; 99.9 2.9E-21 6.2E-26 182.4 24.0 164 66-237 20-183 (401)
46 PF07690 MFS_1: Major Facilita 99.9 4.9E-22 1.1E-26 183.8 18.3 171 60-238 4-176 (352)
47 PRK15402 multidrug efflux syst 99.9 3.1E-21 6.8E-26 182.4 24.1 183 48-238 9-192 (406)
48 PRK15034 nitrate/nitrite trans 99.9 1.1E-20 2.3E-25 177.6 26.5 161 66-234 48-231 (462)
49 KOG0253 Synaptic vesicle trans 99.9 3.4E-21 7.4E-26 169.0 21.2 194 55-267 81-274 (528)
50 PRK10133 L-fucose transporter; 99.9 1.3E-20 2.9E-25 179.3 25.0 146 55-207 29-177 (438)
51 TIGR00806 rfc RFC reduced fola 99.9 7.2E-21 1.6E-25 175.7 21.9 166 67-242 41-210 (511)
52 TIGR00892 2A0113 monocarboxyla 99.9 9.4E-21 2E-25 181.4 23.3 159 67-234 34-193 (455)
53 TIGR00805 oat sodium-independe 99.9 3.3E-22 7.2E-27 197.4 12.9 278 55-364 36-387 (633)
54 PRK11652 emrD multidrug resist 99.9 1.6E-20 3.5E-25 176.8 23.8 165 66-238 22-187 (394)
55 TIGR00886 2A0108 nitrite extru 99.9 1.1E-20 2.4E-25 176.0 21.7 258 61-364 10-281 (366)
56 PRK10504 putative transporter; 99.9 1.3E-19 2.9E-24 174.7 29.0 172 57-236 15-187 (471)
57 TIGR00885 fucP L-fucose:H+ sym 99.9 7.9E-20 1.7E-24 172.5 26.6 172 55-233 6-205 (410)
58 PRK03633 putative MFS family t 99.9 7.2E-20 1.6E-24 171.6 26.0 148 55-209 9-156 (381)
59 TIGR00896 CynX cyanate transpo 99.9 1.2E-19 2.5E-24 168.5 25.4 236 69-365 17-253 (355)
60 PRK10473 multidrug efflux syst 99.9 6.9E-20 1.5E-24 172.4 23.7 160 70-237 21-181 (392)
61 PRK11102 bicyclomycin/multidru 99.9 4.8E-20 1E-24 172.5 22.4 162 69-238 8-170 (377)
62 PRK11195 lysophospholipid tran 99.9 1.3E-19 2.8E-24 170.4 24.4 145 89-238 33-177 (393)
63 PRK05122 major facilitator sup 99.9 5.8E-20 1.3E-24 173.3 21.6 160 61-228 24-192 (399)
64 PRK12382 putative transporter; 99.8 3.3E-19 7.2E-24 167.8 24.7 151 67-225 30-189 (392)
65 KOG0252 Inorganic phosphate tr 99.8 3E-20 6.5E-25 167.9 16.6 283 47-348 36-343 (538)
66 TIGR00897 2A0118 polyol permea 99.8 2.9E-19 6.2E-24 168.7 22.7 230 89-365 43-278 (402)
67 TIGR00899 2A0120 sugar efflux 99.8 5.2E-19 1.1E-23 165.3 23.9 171 61-239 6-181 (375)
68 TIGR00883 2A0106 metabolite-pr 99.8 4.3E-19 9.2E-24 166.5 22.0 229 91-365 27-276 (394)
69 cd06174 MFS The Major Facilita 99.8 8.6E-19 1.9E-23 161.7 23.1 168 58-233 5-172 (352)
70 KOG2504 Monocarboxylate transp 99.8 1.9E-19 4.2E-24 172.1 18.8 281 71-367 65-356 (509)
71 PRK10489 enterobactin exporter 99.8 1.6E-19 3.4E-24 171.4 16.9 241 69-365 34-280 (417)
72 COG0738 FucP Fucose permease [ 99.8 3.6E-18 7.8E-23 152.8 23.8 254 55-365 16-293 (422)
73 PRK11646 multidrug resistance 99.8 3.7E-18 8E-23 160.9 25.5 146 89-236 41-187 (400)
74 PF06609 TRI12: Fungal trichot 99.8 6.1E-18 1.3E-22 162.3 25.9 184 47-240 39-222 (599)
75 PRK09874 drug efflux system pr 99.8 4.6E-18 9.9E-23 160.8 24.5 168 61-237 23-196 (408)
76 COG2223 NarK Nitrate/nitrite t 99.8 7.4E-19 1.6E-23 158.2 17.2 238 70-367 32-277 (417)
77 PTZ00207 hypothetical protein; 99.8 7.3E-18 1.6E-22 162.8 24.1 153 73-236 48-207 (591)
78 COG2807 CynX Cyanate permease 99.8 3.9E-17 8.5E-22 144.1 25.9 245 60-365 20-264 (395)
79 PRK11010 ampG muropeptide tran 99.8 9.2E-18 2E-22 162.1 24.1 168 62-238 22-198 (491)
80 PRK10054 putative transporter; 99.8 4.9E-18 1.1E-22 159.8 21.1 147 89-237 38-185 (395)
81 TIGR00901 2A0125 AmpG-related 99.8 1.8E-17 3.9E-22 153.9 23.0 159 69-237 5-181 (356)
82 PRK11902 ampG muropeptide tran 99.8 2.7E-17 5.9E-22 155.3 23.9 171 59-238 6-185 (402)
83 KOG2615 Permease of the major 99.8 3.7E-18 7.9E-23 151.0 16.1 147 90-237 64-216 (451)
84 TIGR00902 2A0127 phenyl propri 99.8 2E-17 4.3E-22 155.1 21.6 245 59-363 11-259 (382)
85 PRK11128 putative 3-phenylprop 99.8 2.9E-17 6.4E-22 154.0 21.4 163 62-236 14-180 (382)
86 PRK10642 proline/glycine betai 99.8 2.7E-17 6E-22 159.1 19.7 176 89-268 281-459 (490)
87 PRK08633 2-acyl-glycerophospho 99.8 6.2E-17 1.3E-21 172.4 23.7 148 92-239 45-204 (1146)
88 PRK06814 acylglycerophosphoeth 99.8 4E-17 8.7E-22 173.5 22.2 228 93-365 51-282 (1140)
89 PRK15011 sugar efflux transpor 99.8 7.1E-16 1.5E-20 145.2 26.5 148 89-238 46-198 (393)
90 TIGR00882 2A0105 oligosacchari 99.7 1.1E-15 2.3E-20 144.1 21.7 142 89-234 33-182 (396)
91 TIGR00924 yjdL_sub1_fam amino 99.7 3.5E-15 7.6E-20 143.5 24.8 146 89-235 43-192 (475)
92 PRK10207 dipeptide/tripeptide 99.7 3.3E-16 7.2E-21 150.7 17.4 146 89-235 45-194 (489)
93 KOG3764 Vesicular amine transp 99.7 5.1E-17 1.1E-21 144.7 10.2 147 89-236 101-248 (464)
94 PRK09528 lacY galactoside perm 99.7 7.6E-15 1.7E-19 139.4 21.9 143 89-235 41-191 (420)
95 TIGR00880 2_A_01_02 Multidrug 99.6 3.1E-15 6.7E-20 118.9 13.4 136 100-236 4-140 (141)
96 PRK09584 tppB putative tripept 99.6 1.4E-14 2.9E-19 140.2 18.6 143 89-232 52-198 (500)
97 KOG2325 Predicted transporter/ 99.6 5.4E-14 1.2E-18 131.1 21.7 274 41-365 27-320 (488)
98 PF05977 MFS_3: Transmembrane 99.6 1.1E-13 2.3E-18 133.4 23.4 261 44-365 9-275 (524)
99 PRK15462 dipeptide/tripeptide 99.6 2.9E-14 6.2E-19 135.7 18.2 144 89-233 40-187 (493)
100 PRK15011 sugar efflux transpor 99.6 1.2E-13 2.6E-18 130.0 20.6 146 89-236 247-392 (393)
101 TIGR01299 synapt_SV2 synaptic 99.6 5.3E-14 1.1E-18 140.2 18.2 141 96-238 597-737 (742)
102 TIGR02718 sider_RhtX_FptX side 99.6 4.2E-13 9E-18 126.3 23.2 174 55-236 4-185 (390)
103 PRK09528 lacY galactoside perm 99.6 1.4E-14 3E-19 137.7 13.2 148 90-238 258-407 (420)
104 TIGR00792 gph sugar (Glycoside 99.6 8.6E-14 1.9E-18 132.9 17.6 149 89-237 30-197 (437)
105 TIGR00889 2A0110 nucleoside tr 99.6 2E-13 4.4E-18 129.4 19.9 142 89-238 33-183 (418)
106 PRK11551 putative 3-hydroxyphe 99.6 9.4E-14 2E-18 131.3 15.9 148 89-236 250-397 (406)
107 TIGR00890 2A0111 Oxalate/Forma 99.5 8.8E-14 1.9E-18 129.6 14.6 139 89-228 235-375 (377)
108 PRK05122 major facilitator sup 99.5 4.3E-13 9.2E-18 126.6 18.5 142 95-237 250-391 (399)
109 TIGR00899 2A0120 sugar efflux 99.5 5.9E-13 1.3E-17 124.3 19.3 146 89-236 230-375 (375)
110 cd06174 MFS The Major Facilita 99.5 3E-13 6.4E-18 124.7 16.3 160 68-234 191-351 (352)
111 PF03137 OATP: Organic Anion T 99.5 7.2E-16 1.6E-20 148.8 -1.4 283 56-367 7-361 (539)
112 TIGR01301 GPH_sucrose GPH fami 99.5 3.7E-12 7.9E-17 120.9 23.7 150 89-238 34-222 (477)
113 KOG3626 Organic anion transpor 99.5 4.3E-14 9.3E-19 137.0 10.6 275 53-365 98-446 (735)
114 TIGR00889 2A0110 nucleoside tr 99.5 3.1E-13 6.6E-18 128.2 15.8 148 91-238 248-406 (418)
115 KOG2563 Permease of the major 99.5 4.7E-12 1E-16 115.3 21.5 269 45-365 38-322 (480)
116 TIGR00902 2A0127 phenyl propri 99.5 1.6E-12 3.6E-17 121.9 19.0 142 89-233 235-377 (382)
117 TIGR00892 2A0113 monocarboxyla 99.5 5.3E-13 1.2E-17 128.0 15.9 142 89-230 271-416 (455)
118 PRK12382 putative transporter; 99.5 1.4E-12 3.1E-17 122.7 17.6 137 96-233 251-387 (392)
119 PRK09556 uhpT sugar phosphate 99.5 1.3E-12 2.7E-17 126.0 17.1 144 89-233 289-447 (467)
120 PRK09952 shikimate transporter 99.5 3.5E-12 7.5E-17 121.8 18.1 149 89-237 281-435 (438)
121 TIGR00893 2A0114 d-galactonate 99.5 1.9E-12 4.2E-17 121.2 15.5 143 89-232 246-396 (399)
122 PRK09874 drug efflux system pr 99.4 1.3E-12 2.9E-17 123.5 14.4 138 95-233 259-396 (408)
123 PRK03699 putative transporter; 99.4 3.5E-12 7.5E-17 120.2 16.2 146 89-236 236-381 (394)
124 KOG4686 Predicted sugar transp 99.4 3.3E-13 7.2E-18 115.2 7.9 154 49-209 41-198 (459)
125 PRK11273 glpT sn-glycerol-3-ph 99.4 4E-12 8.7E-17 121.9 16.4 144 89-233 284-433 (452)
126 PRK03633 putative MFS family t 99.4 7.5E-12 1.6E-16 117.3 17.7 141 89-233 230-370 (381)
127 TIGR00883 2A0106 metabolite-pr 99.4 2.8E-12 6.2E-17 120.2 14.4 137 89-225 250-391 (394)
128 TIGR00891 2A0112 putative sial 99.4 3.4E-12 7.3E-17 120.3 14.6 132 89-220 269-401 (405)
129 PRK09705 cynX putative cyanate 99.4 1.2E-11 2.5E-16 116.6 16.9 149 89-239 235-386 (393)
130 TIGR00788 fbt folate/biopterin 99.4 7.2E-12 1.6E-16 120.3 15.7 172 56-238 30-212 (468)
131 PF11700 ATG22: Vacuole efflux 99.4 1.8E-11 3.9E-16 116.9 18.2 149 89-237 312-470 (477)
132 PRK03893 putative sialic acid 99.4 5.1E-12 1.1E-16 122.7 14.5 137 89-226 306-444 (496)
133 PRK03545 putative arabinose tr 99.4 3.2E-11 6.8E-16 113.5 19.1 142 89-233 236-378 (390)
134 TIGR00879 SP MFS transporter, 99.4 7.5E-12 1.6E-16 120.4 15.0 148 89-237 314-473 (481)
135 PRK10489 enterobactin exporter 99.4 2.4E-11 5.2E-16 115.4 17.9 149 89-238 254-403 (417)
136 TIGR00897 2A0118 polyol permea 99.4 2.7E-11 5.8E-16 114.5 17.7 151 74-234 244-400 (402)
137 PRK10077 xylE D-xylose transpo 99.4 2.5E-11 5.5E-16 117.3 17.6 149 89-238 301-461 (479)
138 TIGR00882 2A0105 oligosacchari 99.4 1.4E-11 2.9E-16 116.3 14.9 141 90-231 250-391 (396)
139 PRK09669 putative symporter Ya 99.4 2.3E-11 5E-16 116.5 16.1 148 89-236 40-206 (444)
140 PRK11128 putative 3-phenylprop 99.4 7E-11 1.5E-15 110.8 18.9 138 89-229 235-373 (382)
141 PRK11010 ampG muropeptide tran 99.3 7.6E-11 1.6E-15 114.1 19.3 147 89-236 253-404 (491)
142 PF03825 Nuc_H_symport: Nucleo 99.3 2.3E-10 5E-15 107.2 21.6 167 63-238 13-183 (400)
143 TIGR00792 gph sugar (Glycoside 99.3 2.4E-10 5.3E-15 109.1 21.9 119 92-210 255-381 (437)
144 PRK10429 melibiose:sodium symp 99.3 4.9E-11 1.1E-15 115.1 16.4 149 89-237 37-204 (473)
145 TIGR00895 2A0115 benzoate tran 99.3 1.8E-11 4E-16 114.9 13.0 118 89-206 280-397 (398)
146 TIGR00887 2A0109 phosphate:H+ 99.3 2.3E-11 4.9E-16 118.4 13.6 139 101-239 342-493 (502)
147 PRK11462 putative transporter; 99.3 3.4E-10 7.4E-15 108.6 21.2 144 89-232 40-201 (460)
148 COG3104 PTR2 Dipeptide/tripept 99.3 1.1E-10 2.5E-15 108.1 16.8 146 89-235 56-206 (498)
149 PF05977 MFS_3: Transmembrane 99.3 6E-11 1.3E-15 114.5 15.6 153 73-232 239-391 (524)
150 PRK11663 regulatory protein Uh 99.3 9.5E-11 2.1E-15 111.9 16.2 143 89-233 274-422 (434)
151 TIGR00898 2A0119 cation transp 99.3 1.4E-10 3.1E-15 112.9 17.5 136 100-238 361-498 (505)
152 TIGR00900 2A0121 H+ Antiporter 99.3 6.5E-11 1.4E-15 109.8 14.4 122 89-210 242-364 (365)
153 COG2270 Permeases of the major 99.3 5.1E-11 1.1E-15 108.0 12.6 149 89-237 283-431 (438)
154 PLN00028 nitrate transmembrane 99.3 8.7E-11 1.9E-15 113.4 15.2 144 89-235 283-433 (476)
155 PRK10406 alpha-ketoglutarate t 99.3 2.9E-10 6.3E-15 108.5 18.3 147 89-236 274-425 (432)
156 PRK10504 putative transporter; 99.3 3.9E-10 8.5E-15 108.8 19.1 122 89-210 292-416 (471)
157 PF13347 MFS_2: MFS/sugar tran 99.3 5.3E-11 1.2E-15 113.4 12.9 228 89-365 32-281 (428)
158 PRK15075 citrate-proton sympor 99.3 3.1E-10 6.6E-15 108.4 17.9 124 89-213 269-397 (434)
159 TIGR01272 gluP glucose/galacto 99.3 4.8E-10 1E-14 101.8 18.3 131 89-223 173-303 (310)
160 KOG2504 Monocarboxylate transp 99.3 1.1E-10 2.3E-15 112.2 14.7 171 58-235 304-476 (509)
161 PRK12307 putative sialic acid 99.3 2.9E-10 6.3E-15 108.2 17.5 129 89-218 261-391 (426)
162 PRK10054 putative transporter; 99.3 1.1E-10 2.4E-15 109.9 14.3 141 89-231 239-380 (395)
163 COG2814 AraJ Arabinose efflux 99.2 4.1E-10 9E-15 103.0 16.7 142 89-233 242-384 (394)
164 KOG0569 Permease of the major 99.2 5.9E-10 1.3E-14 105.1 18.1 149 89-239 300-459 (485)
165 TIGR00712 glpT glycerol-3-phos 99.2 1.2E-10 2.5E-15 111.4 12.8 148 89-237 282-436 (438)
166 TIGR00881 2A0104 phosphoglycer 99.2 9.9E-11 2.1E-15 109.1 11.8 128 89-217 247-379 (379)
167 TIGR02718 sider_RhtX_FptX side 99.2 9.9E-10 2.1E-14 103.3 17.9 140 89-229 238-385 (390)
168 PF01770 Folate_carrier: Reduc 99.2 9.9E-09 2.1E-13 94.5 22.9 151 89-240 35-187 (412)
169 PRK09848 glucuronide transport 99.2 5E-09 1.1E-13 100.5 22.2 121 89-209 259-388 (448)
170 COG2271 UhpC Sugar phosphate p 99.2 3.3E-10 7.2E-15 102.7 13.0 172 54-232 254-431 (448)
171 PF01306 LacY_symp: LacY proto 99.2 5.4E-10 1.2E-14 103.3 14.6 147 90-237 255-403 (412)
172 PRK10429 melibiose:sodium symp 99.2 5.6E-09 1.2E-13 100.8 22.0 117 92-208 264-392 (473)
173 PRK10091 MFS transport protein 99.2 1E-09 2.2E-14 103.0 15.9 142 89-232 230-373 (382)
174 PF05631 DUF791: Protein of un 99.1 1.8E-08 4E-13 90.4 22.2 227 89-364 64-298 (354)
175 PRK11902 ampG muropeptide tran 99.1 1.6E-09 3.4E-14 102.5 16.4 141 89-234 240-389 (402)
176 TIGR01272 gluP glucose/galacto 99.1 3.1E-09 6.8E-14 96.5 17.7 175 142-365 5-199 (310)
177 TIGR02332 HpaX 4-hydroxyphenyl 99.1 3.2E-10 7E-15 107.4 11.7 135 90-224 275-410 (412)
178 PRK10213 nepI ribonucleoside t 99.1 3.1E-09 6.8E-14 100.1 17.9 137 89-227 247-383 (394)
179 PRK08633 2-acyl-glycerophospho 99.1 1.3E-09 2.8E-14 116.6 17.3 138 89-226 263-401 (1146)
180 TIGR00896 CynX cyanate transpo 99.1 1.2E-09 2.6E-14 101.4 14.6 126 89-215 227-354 (355)
181 PF06813 Nodulin-like: Nodulin 99.1 2.9E-09 6.3E-14 92.2 15.8 161 68-238 18-185 (250)
182 PRK11646 multidrug resistance 99.1 2.2E-09 4.7E-14 101.4 15.7 141 90-230 239-383 (400)
183 PF11700 ATG22: Vacuole efflux 99.1 3.8E-08 8.2E-13 94.2 24.1 234 93-367 69-340 (477)
184 COG2211 MelB Na+/melibiose sym 99.1 7.1E-09 1.5E-13 97.0 18.3 149 89-237 43-210 (467)
185 TIGR00894 2A0114euk Na(+)-depe 99.1 8E-10 1.7E-14 106.5 12.5 146 89-235 292-450 (465)
186 PF01306 LacY_symp: LacY proto 99.1 5.5E-09 1.2E-13 96.7 17.3 141 89-233 38-186 (412)
187 TIGR00710 efflux_Bcr_CflA drug 99.1 5.9E-09 1.3E-13 97.7 17.6 128 89-219 237-370 (385)
188 PRK15402 multidrug efflux syst 99.1 9.8E-09 2.1E-13 97.1 19.1 137 89-227 246-387 (406)
189 PF03825 Nuc_H_symport: Nucleo 99.1 9.5E-09 2.1E-13 96.4 18.7 148 89-236 237-397 (400)
190 PRK06814 acylglycerophosphoeth 99.1 2.3E-09 5E-14 114.5 15.7 138 89-226 256-413 (1140)
191 PRK09848 glucuronide transport 99.1 7E-09 1.5E-13 99.5 17.3 117 89-205 39-173 (448)
192 KOG0253 Synaptic vesicle trans 99.0 6E-10 1.3E-14 99.0 7.8 131 104-237 391-521 (528)
193 PRK11195 lysophospholipid tran 99.0 1.2E-08 2.5E-13 96.2 17.0 135 89-226 236-371 (393)
194 PRK09669 putative symporter Ya 99.0 3.7E-08 8.1E-13 94.3 20.8 116 94-209 264-388 (444)
195 TIGR00711 efflux_EmrB drug res 99.0 5.9E-09 1.3E-13 100.9 15.2 121 89-209 286-410 (485)
196 COG2223 NarK Nitrate/nitrite t 99.0 1.1E-09 2.5E-14 99.3 9.2 145 89-234 249-400 (417)
197 TIGR00903 2A0129 major facilit 99.0 1.3E-08 2.8E-13 94.8 15.9 151 72-236 212-366 (368)
198 TIGR00901 2A0125 AmpG-related 99.0 6.4E-09 1.4E-13 96.6 12.9 105 89-193 239-355 (356)
199 PRK15034 nitrate/nitrite trans 99.0 8.8E-09 1.9E-13 97.4 13.8 136 99-234 291-453 (462)
200 PF07690 MFS_1: Major Facilita 99.0 6E-09 1.3E-13 96.2 12.1 112 89-200 237-352 (352)
201 PRK10133 L-fucose transporter; 99.0 2.9E-08 6.2E-13 94.8 17.0 139 89-230 290-428 (438)
202 PRK14995 methyl viologen resis 99.0 1E-08 2.2E-13 99.7 13.9 121 89-209 290-413 (495)
203 PRK10473 multidrug efflux syst 99.0 2.4E-08 5.1E-13 94.0 16.1 129 89-223 234-362 (392)
204 PF13347 MFS_2: MFS/sugar tran 98.9 1.6E-08 3.4E-13 96.4 14.3 115 94-208 260-383 (428)
205 COG2807 CynX Cyanate permease 98.9 5.2E-08 1.1E-12 86.9 15.6 178 44-233 204-383 (395)
206 COG2211 MelB Na+/melibiose sym 98.9 3E-07 6.6E-12 86.2 21.2 120 89-208 267-395 (467)
207 KOG2816 Predicted transporter 98.9 4.1E-08 8.9E-13 93.1 14.2 133 102-238 70-203 (463)
208 COG0477 ProP Permeases of the 98.9 8.7E-08 1.9E-12 85.9 15.4 155 66-227 16-177 (338)
209 PRK11043 putative transporter; 98.9 1.5E-07 3.2E-12 88.9 17.2 120 89-209 233-357 (401)
210 KOG4686 Predicted sugar transp 98.8 3.8E-08 8.2E-13 84.7 11.4 123 89-213 295-418 (459)
211 PRK11102 bicyclomycin/multidru 98.8 2.3E-07 5E-12 86.7 17.9 116 89-205 225-345 (377)
212 PRK09584 tppB putative tripept 98.8 1.8E-07 3.9E-12 90.8 17.6 137 96-232 318-476 (500)
213 TIGR00788 fbt folate/biopterin 98.8 6.8E-08 1.5E-12 93.0 14.4 147 89-236 283-447 (468)
214 PF03209 PUCC: PUCC protein; 98.8 1.1E-06 2.4E-11 80.3 21.2 232 89-365 10-265 (403)
215 TIGR00924 yjdL_sub1_fam amino 98.8 2E-07 4.3E-12 90.0 16.9 136 96-232 314-465 (475)
216 PRK11462 putative transporter; 98.8 9.6E-07 2.1E-11 84.9 20.2 115 94-208 263-386 (460)
217 TIGR00926 2A1704 Peptide:H+ sy 98.8 4.6E-06 1E-10 82.8 25.0 145 89-233 18-180 (654)
218 TIGR00885 fucP L-fucose:H+ sym 98.8 3.2E-07 6.9E-12 86.9 16.2 134 90-226 265-403 (410)
219 KOG3762 Predicted transporter 98.8 1.2E-08 2.5E-13 95.3 6.0 144 89-233 401-545 (618)
220 KOG0252 Inorganic phosphate tr 98.7 7.4E-09 1.6E-13 94.8 3.8 180 52-239 304-502 (538)
221 KOG2532 Permease of the major 98.7 8.8E-08 1.9E-12 91.2 10.9 173 54-234 260-446 (466)
222 PRK11652 emrD multidrug resist 98.7 4.2E-06 9.2E-11 78.8 20.3 120 89-209 238-360 (394)
223 PF03209 PUCC: PUCC protein; 98.6 5.1E-06 1.1E-10 76.1 19.3 143 89-231 239-394 (403)
224 PRK10207 dipeptide/tripeptide 98.6 1.6E-06 3.5E-11 83.8 16.3 138 96-233 311-474 (489)
225 KOG3764 Vesicular amine transp 98.6 1E-07 2.2E-12 86.0 7.2 140 89-229 301-448 (464)
226 PF03092 BT1: BT1 family; Int 98.6 7.2E-07 1.6E-11 84.9 12.9 146 89-236 20-176 (433)
227 COG2270 Permeases of the major 98.5 1.6E-05 3.4E-10 72.9 19.6 233 92-367 56-311 (438)
228 TIGR00886 2A0108 nitrite extru 98.5 2E-07 4.3E-12 86.7 7.3 106 89-195 256-365 (366)
229 PF05978 UNC-93: Ion channel r 98.5 2.7E-06 5.8E-11 68.3 12.1 111 97-208 40-150 (156)
230 PF00083 Sugar_tr: Sugar (and 98.5 4.7E-10 1E-14 107.6 -11.7 148 89-239 283-441 (451)
231 TIGR00769 AAA ADP/ATP carrier 98.5 0.00018 4E-09 68.5 26.0 116 92-207 41-189 (472)
232 PF06609 TRI12: Fungal trichot 98.5 1.2E-06 2.6E-11 85.1 11.5 146 95-240 350-559 (599)
233 TIGR01301 GPH_sucrose GPH fami 98.5 6.5E-06 1.4E-10 78.6 16.0 142 97-238 308-475 (477)
234 KOG0254 Predicted transporter 98.4 1E-05 2.2E-10 79.1 17.1 147 90-239 326-488 (513)
235 COG0738 FucP Fucose permease [ 98.4 7.9E-06 1.7E-10 74.3 14.6 157 62-228 246-402 (422)
236 PTZ00207 hypothetical protein; 98.4 1.6E-05 3.5E-10 77.7 17.3 142 99-242 396-560 (591)
237 PF06779 DUF1228: Protein of u 98.3 2.7E-06 5.9E-11 60.0 6.4 80 64-150 4-83 (85)
238 PRK15403 multidrug efflux syst 98.2 0.00025 5.3E-09 67.4 20.3 135 89-226 249-388 (413)
239 KOG2816 Predicted transporter 98.1 0.00026 5.7E-09 67.5 18.6 119 89-208 272-391 (463)
240 KOG2615 Permease of the major 98.1 2.9E-05 6.2E-10 70.1 9.7 137 89-225 292-430 (451)
241 KOG2533 Permease of the major 98.0 0.00014 3E-09 69.9 14.7 162 55-223 276-444 (495)
242 KOG0255 Synaptic vesicle trans 98.0 0.00024 5.1E-09 69.7 16.6 133 105-239 361-497 (521)
243 PF12832 MFS_1_like: MFS_1 lik 98.0 2.4E-05 5.1E-10 54.8 6.6 65 62-133 10-74 (77)
244 PRK15462 dipeptide/tripeptide 98.0 0.00034 7.3E-09 67.3 16.3 133 95-227 309-469 (493)
245 KOG3098 Uncharacterized conser 98.0 0.00058 1.3E-08 64.4 16.8 107 100-207 56-162 (461)
246 COG3202 ATP/ADP translocase [E 97.9 0.019 4.1E-07 54.2 27.8 118 92-209 59-210 (509)
247 PF06963 FPN1: Ferroportin1 (F 97.9 0.0047 1E-07 58.3 22.2 133 96-229 40-194 (432)
248 KOG0637 Sucrose transporter an 97.8 6.7E-05 1.5E-09 69.4 8.3 118 89-206 62-202 (498)
249 PF02487 CLN3: CLN3 protein; 97.8 0.00038 8.1E-09 64.6 12.3 115 90-208 277-396 (402)
250 PF00854 PTR2: POT family; In 97.8 0.00027 5.8E-09 66.1 11.2 109 125-234 2-122 (372)
251 PF03219 TLC: TLC ATP/ADP tran 97.7 0.058 1.3E-06 52.0 28.0 117 92-208 56-205 (491)
252 PF03092 BT1: BT1 family; Int 97.7 0.0026 5.7E-08 60.7 16.5 149 90-238 251-416 (433)
253 PF02487 CLN3: CLN3 protein; 97.6 0.003 6.5E-08 58.7 15.5 133 97-234 62-194 (402)
254 PRK03612 spermidine synthase; 97.6 0.011 2.3E-07 57.7 19.4 130 89-219 45-182 (521)
255 TIGR00939 2a57 Equilibrative N 97.5 0.0027 5.9E-08 60.4 14.4 89 146-239 105-200 (437)
256 KOG3810 Micronutrient transpor 97.5 0.0015 3.2E-08 58.6 11.5 153 89-242 36-190 (433)
257 COG3104 PTR2 Dipeptide/tripept 97.5 0.0041 9E-08 58.6 14.5 137 94-231 324-483 (498)
258 KOG3574 Acetyl-CoA transporter 97.4 0.0078 1.7E-07 54.8 14.7 143 55-207 34-193 (510)
259 KOG1237 H+/oligopeptide sympor 97.2 0.0072 1.6E-07 59.3 12.8 144 89-233 68-243 (571)
260 KOG3098 Uncharacterized conser 97.0 0.062 1.3E-06 51.0 17.3 107 97-204 282-409 (461)
261 PF06963 FPN1: Ferroportin1 (F 97.0 0.017 3.6E-07 54.7 13.4 118 89-206 288-415 (432)
262 PF13000 Acatn: Acetyl-coenzym 96.8 0.064 1.4E-06 50.9 15.4 146 56-208 4-179 (544)
263 KOG2563 Permease of the major 96.6 0.0063 1.4E-07 56.6 6.7 147 90-236 297-451 (480)
264 TIGR00939 2a57 Equilibrative N 96.4 0.12 2.6E-06 49.3 14.6 111 95-206 308-431 (437)
265 KOG4332 Predicted sugar transp 96.4 0.0076 1.7E-07 52.2 5.8 87 89-176 67-154 (454)
266 KOG1479 Nucleoside transporter 95.9 0.55 1.2E-05 43.7 15.7 93 146-239 116-208 (406)
267 KOG1330 Sugar transporter/spin 95.8 0.015 3.3E-07 54.4 5.0 125 90-214 279-417 (493)
268 PF03137 OATP: Organic Anion T 95.7 0.0027 5.9E-08 62.1 0.0 151 54-210 307-515 (539)
269 KOG3762 Predicted transporter 95.7 0.012 2.6E-07 56.0 4.1 77 61-144 20-97 (618)
270 TIGR00805 oat sodium-independe 95.3 0.05 1.1E-06 54.6 7.2 65 70-140 348-415 (633)
271 PF01770 Folate_carrier: Reduc 95.0 0.2 4.4E-06 46.8 9.8 98 93-190 284-383 (412)
272 KOG2325 Predicted transporter/ 94.9 0.046 9.9E-07 52.1 5.2 79 149-228 389-468 (488)
273 TIGR00806 rfc RFC reduced fola 94.1 0.13 2.8E-06 49.1 6.3 95 97-191 301-397 (511)
274 PF01733 Nucleoside_tran: Nucl 94.0 0.019 4E-07 52.2 0.6 107 99-205 187-306 (309)
275 KOG1479 Nucleoside transporter 93.9 1.1 2.3E-05 41.9 11.7 113 92-204 280-400 (406)
276 KOG0637 Sucrose transporter an 92.5 0.21 4.6E-06 46.9 5.0 130 97-226 335-487 (498)
277 KOG3097 Predicted membrane pro 90.3 1.1 2.3E-05 40.5 6.8 72 104-176 68-139 (390)
278 COG4262 Predicted spermidine s 90.3 11 0.00023 34.6 12.9 86 89-174 38-132 (508)
279 PF07857 DUF1632: CEO family ( 90.1 4.7 0.0001 35.2 10.6 15 325-339 195-209 (254)
280 KOG3880 Predicted small molecu 88.9 0.62 1.4E-05 41.6 4.3 113 94-206 288-401 (409)
281 KOG4332 Predicted sugar transp 88.1 18 0.0004 32.0 12.6 133 96-229 284-425 (454)
282 PF07672 MFS_Mycoplasma: Mycop 87.8 15 0.00033 32.1 12.0 92 96-187 143-246 (267)
283 TIGR00769 AAA ADP/ATP carrier 82.8 48 0.001 32.1 18.0 71 155-226 274-345 (472)
284 PF12832 MFS_1_like: MFS_1 lik 82.7 8.4 0.00018 26.7 6.7 48 320-368 12-59 (77)
285 PF01733 Nucleoside_tran: Nucl 81.8 0.44 9.6E-06 43.2 0.0 79 156-239 6-88 (309)
286 PF03219 TLC: TLC ATP/ADP tran 81.3 56 0.0012 31.8 18.4 71 155-226 290-361 (491)
287 PF06912 DUF1275: Protein of u 80.8 33 0.00072 28.9 15.9 40 100-139 52-94 (209)
288 KOG3880 Predicted small molecu 80.6 9.1 0.0002 34.5 7.6 137 97-238 65-202 (409)
289 KOG3810 Micronutrient transpor 79.2 7.4 0.00016 35.7 6.7 94 97-190 274-369 (433)
290 TIGR00880 2_A_01_02 Multidrug 78.7 12 0.00026 28.2 7.4 40 94-133 87-126 (141)
291 COG5336 Uncharacterized protei 78.7 12 0.00025 27.6 6.3 33 98-130 46-79 (116)
292 PF07672 MFS_Mycoplasma: Mycop 75.3 4.5 9.8E-05 35.4 4.2 56 179-234 2-61 (267)
293 PF13000 Acatn: Acetyl-coenzym 75.0 86 0.0019 30.6 13.1 61 149-209 407-467 (544)
294 PF11947 DUF3464: Protein of u 74.6 35 0.00075 27.2 8.6 81 116-199 56-146 (153)
295 KOG3626 Organic anion transpor 71.7 2 4.2E-05 43.4 1.3 149 54-208 394-648 (735)
296 PRK10263 DNA translocase FtsK; 69.3 68 0.0015 35.0 11.7 25 194-219 142-166 (1355)
297 PRK14229 camphor resistance pr 66.0 53 0.0012 24.5 9.2 26 153-178 55-80 (108)
298 PF01528 Herpes_glycop: Herpes 64.5 70 0.0015 29.8 9.6 33 144-176 231-263 (374)
299 TIGR00926 2A1704 Peptide:H+ sy 64.4 61 0.0013 32.9 10.1 85 147-232 565-649 (654)
300 PHA03237 envelope glycoprotein 62.4 1.2E+02 0.0026 28.8 10.8 14 255-268 368-381 (424)
301 PHA03242 envelope glycoprotein 59.9 1.6E+02 0.0035 28.0 12.1 38 164-201 265-306 (428)
302 TIGR00844 c_cpa1 na(+)/h(+) an 59.3 1.9E+02 0.0041 30.1 12.3 37 188-225 106-142 (810)
303 KOG2601 Iron transporter [Inor 56.9 1.6E+02 0.0036 27.7 10.3 123 103-226 72-217 (503)
304 PF02632 BioY: BioY family; I 53.4 1.1E+02 0.0023 24.4 7.8 25 101-125 60-84 (148)
305 PF06779 DUF1228: Protein of u 53.1 80 0.0017 22.4 9.1 70 158-231 5-74 (85)
306 PF05631 DUF791: Protein of un 52.8 1.9E+02 0.0042 26.8 15.1 104 105-208 174-303 (354)
307 PF12805 FUSC-like: FUSC-like 50.3 1.6E+02 0.0036 26.2 9.6 34 129-162 4-38 (284)
308 PTZ00101 rhomboid-1 protease; 49.2 2E+02 0.0042 25.7 12.3 39 105-143 119-158 (278)
309 COG3202 ATP/ADP translocase [E 47.9 2.7E+02 0.006 27.1 17.4 80 150-230 287-368 (509)
310 TIGR01666 YCCS hypothetical me 47.2 3.4E+02 0.0074 28.0 12.4 50 115-164 44-98 (704)
311 TIGR01667 YCCS_YHJK integral m 46.2 3.3E+02 0.0072 28.0 11.9 44 121-164 54-98 (701)
312 TIGR02230 ATPase_gene1 F0F1-AT 45.7 1.2E+02 0.0026 22.3 6.8 27 109-135 57-84 (100)
313 COG3619 Predicted membrane pro 45.2 2E+02 0.0043 24.7 18.2 31 93-123 54-84 (226)
314 PF06813 Nodulin-like: Nodulin 45.2 47 0.001 29.0 5.1 45 321-366 15-59 (250)
315 PRK11715 inner membrane protei 45.2 2.9E+02 0.0062 26.5 11.2 19 127-145 335-353 (436)
316 COG1268 BioY Uncharacterized c 43.5 1.2E+02 0.0025 25.2 6.8 23 101-123 89-111 (184)
317 PF07760 DUF1616: Protein of u 43.0 2.5E+02 0.0054 25.2 10.9 59 150-209 22-80 (287)
318 PF06123 CreD: Inner membrane 42.7 3.1E+02 0.0068 26.2 11.3 54 127-184 329-382 (430)
319 PTZ00265 multidrug resistance 42.6 5.6E+02 0.012 29.2 23.4 21 212-232 196-216 (1466)
320 PHA03231 glycoprotein BALF4; P 41.9 1E+02 0.0022 31.9 7.4 13 255-267 769-781 (829)
321 PF06570 DUF1129: Protein of u 40.5 2.2E+02 0.0048 23.9 12.1 23 212-234 175-197 (206)
322 COG0861 TerC Membrane protein 39.5 2.7E+02 0.0058 24.5 12.2 67 154-223 23-89 (254)
323 PF11947 DUF3464: Protein of u 38.8 66 0.0014 25.7 4.5 23 294-316 50-72 (153)
324 PF05255 UPF0220: Uncharacteri 38.5 2.2E+02 0.0047 23.2 9.1 61 175-235 14-79 (166)
325 PF11299 DUF3100: Protein of u 37.8 41 0.00089 28.8 3.4 97 89-207 134-230 (241)
326 COG4769 Predicted membrane pro 37.7 1.1E+02 0.0023 24.8 5.4 51 103-159 82-132 (181)
327 KOG1237 H+/oligopeptide sympor 37.1 1.3E+02 0.0027 30.1 7.2 83 127-209 421-520 (571)
328 PF10183 ESSS: ESSS subunit of 36.5 1.4E+02 0.003 22.2 5.7 27 212-238 58-85 (105)
329 PF11151 DUF2929: Protein of u 36.5 1.2E+02 0.0026 19.6 5.9 44 193-237 12-55 (57)
330 PF01405 PsbT: Photosystem II 36.0 77 0.0017 17.3 3.0 13 227-239 16-28 (29)
331 PF06341 DUF1056: Protein of u 34.3 1.4E+02 0.003 19.8 5.4 38 144-182 25-62 (63)
332 PRK10692 hypothetical protein; 33.9 1.6E+02 0.0034 20.9 5.1 17 123-139 3-19 (92)
333 COG4858 Uncharacterized membra 33.4 2.8E+02 0.0061 23.0 11.1 21 156-176 132-152 (226)
334 PF03547 Mem_trans: Membrane t 33.4 4E+02 0.0086 24.7 12.0 16 106-121 7-22 (385)
335 KOG3574 Acetyl-CoA transporter 32.9 2.2E+02 0.0048 27.0 7.4 58 153-210 375-432 (510)
336 COG4177 LivM ABC-type branched 32.6 3.9E+02 0.0084 24.4 12.3 57 148-209 209-269 (314)
337 PRK14230 camphor resistance pr 32.3 2.3E+02 0.0049 21.6 9.8 24 154-177 60-83 (119)
338 COG1288 Predicted membrane pro 32.0 1.7E+02 0.0036 28.0 6.5 36 193-229 198-234 (481)
339 PF10785 NADH-u_ox-rdase: NADH 31.6 1.9E+02 0.0041 20.5 5.8 41 106-146 30-77 (86)
340 PF15050 SCIMP: SCIMP protein 30.8 88 0.0019 23.6 3.7 36 212-247 3-40 (133)
341 PF12273 RCR: Chitin synthesis 30.5 21 0.00046 27.6 0.6 18 214-231 1-18 (130)
342 PF04281 Tom22: Mitochondrial 30.0 1.6E+02 0.0035 23.0 5.3 28 172-199 60-87 (137)
343 KOG2881 Predicted membrane pro 29.9 3.4E+02 0.0073 23.9 7.6 15 106-120 70-84 (294)
344 PRK11875 psbT photosystem II r 29.3 95 0.0021 17.1 2.7 12 228-239 17-28 (31)
345 TIGR02230 ATPase_gene1 F0F1-AT 29.3 2.3E+02 0.0051 20.8 6.9 33 191-223 51-86 (100)
346 PF02694 UPF0060: Uncharacteri 28.9 94 0.002 23.0 3.6 47 95-141 55-101 (107)
347 PRK11469 hypothetical protein; 28.8 3.4E+02 0.0074 22.5 9.5 50 90-139 130-180 (188)
348 PF10225 DUF2215: Uncharacteri 28.8 4E+02 0.0086 23.3 11.4 57 143-203 30-86 (249)
349 PF14851 FAM176: FAM176 family 27.3 1.9E+02 0.0041 23.2 5.3 33 144-176 15-47 (153)
350 COG5336 Uncharacterized protei 27.3 2E+02 0.0043 21.5 4.9 32 136-167 62-93 (116)
351 PRK02237 hypothetical protein; 27.2 1.6E+02 0.0035 21.9 4.5 47 95-141 57-103 (109)
352 PF06706 CTV_P6: Citrus triste 26.5 1.1E+02 0.0024 18.3 2.9 23 359-381 5-27 (51)
353 KOG2765 Predicted membrane pro 26.2 2.5E+02 0.0053 26.3 6.5 16 118-133 208-223 (416)
354 PF10762 DUF2583: Protein of u 26.1 1.9E+02 0.0042 20.3 4.5 17 123-139 3-19 (89)
355 PTZ00370 STEVOR; Provisional 26.0 1.4E+02 0.0031 26.5 4.8 24 212-235 256-279 (296)
356 PRK14231 camphor resistance pr 25.6 3.2E+02 0.0069 21.1 8.9 24 154-177 62-85 (129)
357 PRK14233 camphor resistance pr 25.5 3.3E+02 0.0071 21.2 10.1 24 154-177 70-93 (133)
358 PF13829 DUF4191: Domain of un 25.4 1.6E+02 0.0035 25.2 4.9 22 212-233 50-71 (224)
359 CHL00031 psbT photosystem II p 25.4 1E+02 0.0023 17.3 2.5 13 228-240 17-29 (33)
360 PF15061 DUF4538: Domain of un 24.8 95 0.0021 20.1 2.6 22 212-233 4-25 (58)
361 PRK03818 putative transporter; 24.7 7E+02 0.015 24.8 11.5 82 93-175 434-516 (552)
362 KOG0055 Multidrug/pheromone ex 24.4 1E+03 0.022 26.5 13.7 38 190-231 152-189 (1228)
363 COG1079 Uncharacterized ABC-ty 24.1 5.4E+02 0.012 23.3 14.7 98 106-207 19-118 (304)
364 TIGR00986 3a0801s05tom22 mitoc 24.0 2.1E+02 0.0046 22.5 4.9 24 172-195 58-81 (145)
365 PRK15049 L-asparagine permease 23.9 6.9E+02 0.015 24.4 12.0 20 212-231 446-465 (499)
366 PRK10921 twin-arginine protein 23.4 5.1E+02 0.011 22.8 12.7 11 212-222 192-202 (258)
367 PF09605 Trep_Strep: Hypotheti 22.8 4.4E+02 0.0095 21.8 12.2 55 102-159 36-90 (186)
368 PLN02332 membrane bound O-acyl 22.4 7.2E+02 0.016 24.1 10.3 28 123-150 340-367 (465)
369 KOG3097 Predicted membrane pro 22.4 1.9E+02 0.0042 26.7 5.0 42 92-133 308-349 (390)
370 KOG0055 Multidrug/pheromone ex 21.7 1.1E+03 0.024 26.1 18.9 22 211-232 806-827 (1228)
371 PF04550 Phage_holin_2: Phage 21.6 2.9E+02 0.0063 19.7 4.7 31 147-177 31-61 (89)
372 PLN02878 homogentisate phytylt 21.6 5.9E+02 0.013 22.8 9.5 73 120-193 195-267 (280)
373 TIGR02865 spore_II_E stage II 21.4 4.6E+02 0.01 27.4 8.3 46 150-196 186-231 (764)
374 TIGR03802 Asp_Ala_antiprt aspa 21.3 8.3E+02 0.018 24.4 11.5 84 94-179 450-534 (562)
375 PF02990 EMP70: Endomembrane p 20.9 4E+02 0.0086 26.3 7.5 32 177-208 291-322 (521)
376 PRK14220 camphor resistance pr 20.7 3.9E+02 0.0084 20.3 9.2 25 153-177 61-85 (120)
377 COG2274 SunT ABC-type bacterio 20.4 9.7E+02 0.021 24.8 22.7 139 95-235 158-315 (709)
378 PLN02776 prenyltransferase 20.2 6.9E+02 0.015 23.1 10.4 25 122-146 74-98 (341)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-31 Score=246.15 Aligned_cols=309 Identities=28% Similarity=0.467 Sum_probs=255.1
Q ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCC-cccc--CCh----hHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016882 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGI-SWYD--LSS----VEIGLITSGSLYGALIGSILAFNIADI 120 (381)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~g~l~d~ 120 (381)
+++....+..+++.+.+||....+++....+.+-.+..- +.+| .+. ...+.+.+++.+|.++|+++.++++||
T Consensus 7 ~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~ 86 (485)
T KOG0569|consen 7 RRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADR 86 (485)
T ss_pred HHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344555577777779999999999887665543211000 0023 333 345667888999999999999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHH---hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHH
Q 016882 121 LGRRRELILAALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV 197 (381)
Q Consensus 121 ~Grk~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 197 (381)
+|||..+++..++..++.++..+ .+++.+++++|++.|+..|......+.|+.|..|.+.||....+.+.+..+|.+
T Consensus 87 ~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~l 166 (485)
T KOG0569|consen 87 FGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGIL 166 (485)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHH
Confidence 99999999998888887777666 467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hhcccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHH-hhccccCcchhhHHHHHHHHHHHhCCCCCCCC
Q 016882 198 GGYGIGSL-LVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLL-CAMKRKGDMQDLRESAISCLCRLRGQSIGDSA 275 (381)
Q Consensus 198 ~~~~~~~~-l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (381)
++..++.. +..+...|++.+.+..+++++.++...++||||+|+.. ++ +++||++.++++++.+.++++
T Consensus 167 l~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~---------~~~~A~~sl~~y~G~~~~~~~ 237 (485)
T KOG0569|consen 167 LGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKG---------DEEEARKALKFYRGKEDVEAE 237 (485)
T ss_pred HHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcC---------CHHHHHHHHHHHhCCCcchhH
Confidence 99777655 33444479999999999999999999999999999988 45 789999999999999887665
Q ss_pred hhhHHHHHHhhhhccccccccchhhcccc-chHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHH
Q 016882 276 PTEVDEILTELSYVGEDKEVSLREVFHGK-CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLG 354 (381)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 354 (381)
.++..++.++.+. +++++.+++++++++ .++++.+.+.+.+.++++|.+...+|...++++.|+ +.+.+.+++...+
T Consensus 238 ~e~~~~e~~~~~~-~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~-~~~~a~~an~~~g 315 (485)
T KOG0569|consen 238 IEEMLREIEEEEL-EKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGF-TPEEAQYANLGIG 315 (485)
T ss_pred HHHHHHHHHHhcc-ccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 5555444444322 234677899999987 566788888999999999999999999999999999 8899999999999
Q ss_pred HHHHHHhHHHHHH
Q 016882 355 LFKVGSCTLFFMS 367 (381)
Q Consensus 355 ~~~~i~~~~~~~~ 367 (381)
...++.++++.+.
T Consensus 316 ~v~~~~t~~~~~l 328 (485)
T KOG0569|consen 316 IVNLLSTLVSPFL 328 (485)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999997754
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=6.9e-29 Score=240.92 Aligned_cols=305 Identities=40% Similarity=0.596 Sum_probs=241.3
Q ss_pred HHHHHHHHHHHHHhhhccc--ccccccccccccCCCCCCCccccCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHhhchH
Q 016882 49 AAILPFLFPALGGLLYGYD--IGSTSCATISIESPTLSGISWYDLSS--VEIGLITSGSLYGALIGSILAFNIADILGRR 124 (381)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk 124 (381)
......+....+.+..+++ .+..++....+.++..... ...+. .+.+|+.+...++..+++++.|+++|++|||
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~--~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk 119 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYD--LSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRK 119 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3445556677777888886 5666666666665422211 11222 4669999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHH
Q 016882 125 RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (381)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 204 (381)
+.++++.++..++.+++++++|+++++++|++.|+|.|+.....+.|++|..|++.||...+..+....+|..++..++.
T Consensus 120 ~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~ 199 (513)
T KOG0254|consen 120 KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINY 199 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999966655
Q ss_pred HhhcccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHH-
Q 016882 205 LLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEIL- 283 (381)
Q Consensus 205 ~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (381)
...+...+||..+.+..+++++..+..+++||+|+|+.+++ +.+|+++.++++++.+..+ ...+.++.+
T Consensus 200 ~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g---------~~~~a~~~l~~l~g~~~~~-~~~~~~~~~~ 269 (513)
T KOG0254|consen 200 GTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG---------RLEEAKRSLKRLRGLSPED-VEVELELLKI 269 (513)
T ss_pred hhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC---------ChHHHHHHHHHHhCCCCcc-hHHHHHHHHH
Confidence 55433138999999999999998877888999999999976 8899999999999844221 122222222
Q ss_pred Hhhh-hccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhH
Q 016882 284 TELS-YVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCT 362 (381)
Q Consensus 284 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 362 (381)
+... ......+..+.+++++..+++..+.+.+..+++++|++...+|.+++++..|.++.. ...+.+.++.++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~--~~~~~~~~~v~~~~t~ 347 (513)
T KOG0254|consen 270 KLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT--FLASIILGVVNFLGTL 347 (513)
T ss_pred HHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch--HHHHHHHHHHHHHHHH
Confidence 1111 111122224677777567788888999999999999999999999999999983332 7788888888888888
Q ss_pred HHHHH
Q 016882 363 LFFMS 367 (381)
Q Consensus 363 ~~~~~ 367 (381)
++.+.
T Consensus 348 ~~~~l 352 (513)
T KOG0254|consen 348 VATYL 352 (513)
T ss_pred HHHHH
Confidence 87533
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=8.1e-29 Score=245.04 Aligned_cols=273 Identities=18% Similarity=0.213 Sum_probs=217.2
Q ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHH
Q 016882 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (381)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l 127 (381)
+..|.++++++++.+..+++...++..+|.+.++ +|++..+.+++.+++.++.+++++++|+++||+|||+.+
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~-------~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l 235 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKD-------LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL 235 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 4455566777788888899998899999998876 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhh
Q 016882 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (381)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 207 (381)
+++.++.+++.++++++++++.++++|++.|++.|+..+...+++.|++|+++|++.+++...++.+|.++++.++..+.
T Consensus 236 ii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 236 LICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887766
Q ss_pred ccc------------chhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCC-
Q 016882 208 DLV------------AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDS- 274 (381)
Q Consensus 208 ~~~------------~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 274 (381)
... .+||+.+++.+++.++.++..+++||+|+|+..++ +.+|+++.+++++..+....
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~g---------r~~eA~~iL~~i~~~n~~~~~ 386 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENG---------KHDEAWMILKLIHDTNMRAKG 386 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCC---------CHHHHHHHHHHHhcCCCCCcC
Confidence 422 27999999999888888888888999999998876 67899999999876543211
Q ss_pred Chhh---HHHHHHhhh-----h-c-ccc----------------ccccchhhccccchHHHHHHHHHHHHHHhhchhHHH
Q 016882 275 APTE---VDEILTELS-----Y-V-GED----------------KEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVL 328 (381)
Q Consensus 275 ~~~~---~~~~~~~~~-----~-~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (381)
...+ .++.+.... + + +.. .+.+++++|+.+.+++.++++++ ++....+++.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~-wf~~~~~yygl~ 465 (742)
T TIGR01299 387 HPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGV-WFTLSFGYYGLS 465 (742)
T ss_pred chhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 1110 011000000 0 0 000 01135667776666665555554 555666789999
Q ss_pred hcHHHHHHH
Q 016882 329 YYAASILQS 337 (381)
Q Consensus 329 ~~~~~~~~~ 337 (381)
.|.|.++++
T Consensus 466 ~w~P~~~~~ 474 (742)
T TIGR01299 466 VWFPDMIKH 474 (742)
T ss_pred HHHHHHHHH
Confidence 999988644
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=2.5e-27 Score=229.82 Aligned_cols=276 Identities=20% Similarity=0.247 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q 016882 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (381)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~ 129 (381)
.+..+++++++.+.++++...++...+.+..+... ++.+.+..+.+++.+.+.++..++++++|+++||+|||+.+.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYH--GKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 34455777788899999999999888876553111 1135667788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhch------HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHH
Q 016882 130 AALLYLVGALVTALAPD------FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (381)
Q Consensus 130 ~~~~~~~~~~~~~~~~~------~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 203 (381)
+.++..++.++++++++ ++.++++|++.|++.|...+..+.++.|++|+++|++++++.+....+|.++++.++
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888765 788999999999999999999999999999999999999999999999999999888
Q ss_pred HHhhc----------------------ccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhH-HHHH
Q 016882 204 SLLVD----------------------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLR-ESAI 260 (381)
Q Consensus 204 ~~l~~----------------------~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 260 (381)
..+.. ..++||+.|.+.++++++.++..+++||+|+|+..++ ++ ++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~---------~~~~~a~ 242 (502)
T TIGR00887 172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVA---------KDVEQAA 242 (502)
T ss_pred HHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhC---------cchHHHH
Confidence 76542 1137999999998888888788888999999998765 22 3455
Q ss_pred HHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchH---HHHHHHHHHHHHHhhchhHHHhcHHHHHHH
Q 016882 261 SCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK---ALIIGAGLVLFQQITGQPSVLYYAASILQS 337 (381)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (381)
+.+++.+..+..++ .++.++.+++ ++..+.+++++++++..+ +..+++...++.+...++....|.|.++++
T Consensus 243 ~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~ 317 (502)
T TIGR00887 243 SDMSAVLQVKIEAE-PDEVEKASTA----VEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA 317 (502)
T ss_pred HHHHHHhccccccC-cccccchhcc----ccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH
Confidence 55666544322111 1111111111 111223577887643222 233333333333333345667788999998
Q ss_pred cCCC
Q 016882 338 AGFS 341 (381)
Q Consensus 338 ~g~~ 341 (381)
.|++
T Consensus 318 ~G~~ 321 (502)
T TIGR00887 318 IGYS 321 (502)
T ss_pred HcCC
Confidence 8883
No 5
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.5e-28 Score=218.53 Aligned_cols=287 Identities=15% Similarity=0.088 Sum_probs=226.8
Q ss_pred hHHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH
Q 016882 47 VSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE 126 (381)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~ 126 (381)
.+.++.+++.+.+++..+++.+-+.+.+.|.+.++ .++|.+|.|++.+.+.+.+.++.++.|.++||.++|+.
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-------~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~f 96 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIED-------GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYF 96 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcee
Confidence 33455677889999999999999999999999998 78999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHH--H
Q 016882 127 LILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG--S 204 (381)
Q Consensus 127 l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~ 204 (381)
+.+++++.++.+++++++++.+.+.++.++.|..+|..+|.+...+..|+|+++||+..++++.+.++|+.+.+++. +
T Consensus 97 m~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 97 MAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred ehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred HhhcccchhHHHHHhhHHHHHHHH-HHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHH
Q 016882 205 LLVDLVAGWRYMYGASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEIL 283 (381)
Q Consensus 205 ~l~~~~~~w~~~f~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (381)
.+..+. +||..|++.++++++.. +.++..+|+|+..-.. ..||.+ + |..+..
T Consensus 177 ~~~~~~-~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP----------~ie~~~-------~---------d~~e~~ 229 (448)
T COG2271 177 FFAFHG-GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP----------PIEEYR-------G---------DPLEIY 229 (448)
T ss_pred HHHhcc-chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC----------CHHHhh-------c---------Cchhhh
Confidence 888776 99999999999988754 5555688888632111 011111 0 000000
Q ss_pred Hhhhhccccccccchhhcccc-chHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHc-CCCCCchhHHHHHHHHHHHHHHh
Q 016882 284 TELSYVGEDKEVSLREVFHGK-CLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKVGSC 361 (381)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~ 361 (381)
+++++.+..+.++++.+. ...+.++.+.+..+..+..-+.+..|.|.++.+. |+ +..++....+++-..++.|+
T Consensus 230 ---~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~-s~~~a~~a~~lfE~agl~G~ 305 (448)
T COG2271 230 ---EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF-SLVKANWAISLFEVAGLPGT 305 (448)
T ss_pred ---hhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCC-CHHHHHHHHHHHHHHhhHHH
Confidence 001111113344444322 1113333333333334444678899999998776 88 88999999999999999999
Q ss_pred HHHHHHHHHH
Q 016882 362 TLFFMSNVYF 371 (381)
Q Consensus 362 ~~~~~~~~~~ 371 (381)
+++.+.++-+
T Consensus 306 Ll~GwlSDkl 315 (448)
T COG2271 306 LLAGWLSDKL 315 (448)
T ss_pred HHHHHHHHHh
Confidence 9988775433
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=2.5e-26 Score=221.15 Aligned_cols=308 Identities=33% Similarity=0.535 Sum_probs=217.6
Q ss_pred HHHHHHHHHHHHHhhhcccccccccccccccCCCCC-CCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHH
Q 016882 49 AAILPFLFPALGGLLYGYDIGSTSCATISIESPTLS-GISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (381)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l 127 (381)
..+...+++.++.+...++........+.+..+..- ...+-+.+..+.+++.+++.++..++++++|+++||+|||+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~ 104 (481)
T TIGR00879 25 KVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL 104 (481)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH
Confidence 344445666667788888888888888877665110 0000124489999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHH-
Q 016882 128 ILAALLYLVGALVTALAP---DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG- 203 (381)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~- 203 (381)
.++.++..++.+++.+.. +++.++++|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 184 (481)
T TIGR00879 105 LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGS 184 (481)
T ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999998886543 4568999999999999999999999999999999999999999999999999999999
Q ss_pred --HHhhcccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhh-HH
Q 016882 204 --SLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTE-VD 280 (381)
Q Consensus 204 --~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 280 (381)
....+.. +||+.|++.++..++.++..+++||+|++...++ +.+++++..++.......+....+ .+
T Consensus 185 ~~~~~~~~~-~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (481)
T TIGR00879 185 GKVSLNNTL-GWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKG---------RVEEARKSLARLRGTSGEDKELLDELE 254 (481)
T ss_pred HhhcCCCCc-cHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcC---------ChHHHHHHHHHHhCCCCCcHHHHHHHH
Confidence 5555555 9999999977777777777778999988765433 122233333333322221111100 00
Q ss_pred HHHHhhhhccccccccchhhcccc--chHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHH
Q 016882 281 EILTELSYVGEDKEVSLREVFHGK--CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKV 358 (381)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 358 (381)
........+.+..+..+.+.++.. ..++.++...+..+....+.....+|.|+++++.|+ +...+.....+..+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~ 333 (481)
T TIGR00879 255 LIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGV-STDHAFLVSIIVGAVNF 333 (481)
T ss_pred HHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCC-CchHHHHHHHHHHHHHH
Confidence 001110111111112234444322 235555656666666666677788999999999999 55777778888888888
Q ss_pred HHhHHHHHH
Q 016882 359 GSCTLFFMS 367 (381)
Q Consensus 359 i~~~~~~~~ 367 (381)
++.+++...
T Consensus 334 ~~~~~~g~l 342 (481)
T TIGR00879 334 AFTFVAIFL 342 (481)
T ss_pred HHHHHHHHH
Confidence 888776543
No 7
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=6.4e-26 Score=219.00 Aligned_cols=297 Identities=29% Similarity=0.484 Sum_probs=214.3
Q ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCCC-CccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q 016882 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG-ISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (381)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~ 129 (381)
....+.++++.+..+++...+++..+.+.++-.+. ..+++.+..+.+++.+++.++..++++++|+++||+|||+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~ 90 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI 90 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 34446667788999999999999888776652211 12248899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh------------chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHH
Q 016882 130 AALLYLVGALVTALA------------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV 197 (381)
Q Consensus 130 ~~~~~~~~~~~~~~~------------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 197 (381)
+.++.+++.++++++ +.++.++++|++.|++.|...+...++++|++|+++|++++++.+.+..+|.+
T Consensus 91 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 91 AAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 999999888877763 23567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc-------ccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCC
Q 016882 198 GGYGIGSLLVD-------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQS 270 (381)
Q Consensus 198 ~~~~~~~~l~~-------~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (381)
+++.++..+.. ...+||+.|++.+++.++..+..+++||+|+++..++ +.+++++..+++.+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~---------~~~~~~~~~~~~~~~~ 241 (479)
T PRK10077 171 VVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRG---------KQEQAEGILRKIMGNT 241 (479)
T ss_pred HHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcC---------CHHHHHHHHHHHcCCh
Confidence 99887765542 1238999999998888877777778999998875543 3345555555554332
Q ss_pred CCCCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHH
Q 016882 271 IGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVS 350 (381)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 350 (381)
.. ....++..+....+. ...+..+. .........+....+.+..+++...+|.|++.++.|. +...+....
T Consensus 242 ~~---~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~-~~~~~~~~~ 312 (479)
T PRK10077 242 LA---TQALQEIKHSLDHGR----KTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGA-STDIALLQT 312 (479)
T ss_pred hH---HHHHHHHHHHHHHhh----hhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCC-CCchHHHHH
Confidence 11 111111111110000 00011111 1112223333445566667777888999999999998 555566666
Q ss_pred HHHHHHHHHHhHHHH
Q 016882 351 ILLGLFKVGSCTLFF 365 (381)
Q Consensus 351 ~~~~~~~~i~~~~~~ 365 (381)
...++..+++.+++.
T Consensus 313 ~~~~~~~~i~~~~~g 327 (479)
T PRK10077 313 IIVGVINLTFTVLAI 327 (479)
T ss_pred HHHHHHHHHHHHHHH
Confidence 677777777776654
No 8
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.3e-26 Score=210.17 Aligned_cols=254 Identities=22% Similarity=0.245 Sum_probs=209.7
Q ss_pred HHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 016882 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (381)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~ 132 (381)
.++...++.|..+.+.......+|++.+| +|+|..+.|++.++|.++..+++++...++||+.||++++..+.
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~d-------l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAAD-------LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 34556677788899999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccch
Q 016882 133 LYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG 212 (381)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 212 (381)
+++++++++++++||+.++++|++.|+..|..++...++..++.|+++|++++++...+..++.++|.+++.++.+.. |
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~-G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-G 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-h
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred hHHHHHhhHHHHHHHHHHH-hhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccc
Q 016882 213 WRYMYGASTPLAVIMGMGM-WWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGE 291 (381)
Q Consensus 213 w~~~f~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (381)
||+.|++.++++++.++.. ..+| |+... ++..
T Consensus 166 WR~~F~~ia~l~ll~~~~~~~~lP--~~~~~---------------------------------------------~~~~ 198 (394)
T COG2814 166 WRATFLAIAVLALLALLLLWKLLP--PSEIS---------------------------------------------GSLP 198 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CccCC---------------------------------------------CCCC
Confidence 9999999999998865544 4577 22000 0001
Q ss_pred cccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 292 DKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
....+..+.++++..+..++...+... ..+..++|..|++.+..|+ +.+.......++++..++|+.++-
T Consensus 199 ~~~~~~~~~l~~p~v~~~l~~t~l~~~---g~F~~ftYi~P~L~~v~g~-s~~~vs~~Ll~~Gv~~~~Gn~~gG 268 (394)
T COG2814 199 GPLRTLLRLLRRPGVLLGLLATFLFMT---GHFALYTYIRPFLESVAGF-SVSAVSLVLLAFGIAGFIGNLLGG 268 (394)
T ss_pred cchhHHHHHhcCchHHHHHHHHHHHHc---chhhhHHhHHHHHHHccCC-CHhHHHHHHHHHHHHHHHHHHHHh
Confidence 111224556666644444433333222 2234455555666666799 888999999999999999999865
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=3.6e-26 Score=216.14 Aligned_cols=286 Identities=17% Similarity=0.191 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q 016882 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (381)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~ 130 (381)
+...+.++++++.++++....+...|.+.++ +|++..+.+++.+++.+++.+++++.|+++||+|||+++..+
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~ 79 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKD-------LGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGI 79 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhh-------cCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHH
Confidence 3445667777788999999999999988887 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc-
Q 016882 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL- 209 (381)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~- 209 (381)
.++++++.+++++++|++.++++|++.|++.+...+....++.|++|+++|++++++++.+..+|..+++++++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 159 (412)
T TIGR02332 80 MVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD 159 (412)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988642
Q ss_pred ----cchhHHHHHhhHHHHHHHH-HHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHH
Q 016882 210 ----VAGWRYMYGASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILT 284 (381)
Q Consensus 210 ----~~~w~~~f~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (381)
..|||+.|++.+++.++.. +..+++||+|+.. ++. ..++.+...++++.+..+.++.+ +
T Consensus 160 ~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~---------~~l-~~~~~~~~~~~~~~~~~~~~~~~------~ 223 (412)
T TIGR02332 160 GLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA---------KWL-DEEDKKALKEMIDNDQLTLEQPE------G 223 (412)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC---------CCC-CHHHHHHHHHHHHhccccccccc------c
Confidence 2399999999988877644 4555678887521 000 00111111111111110000000 0
Q ss_pred hhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHc--CCCCCchhHHHHHHHHHHHHHHhH
Q 016882 285 ELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA--GFSAASDATRVSILLGLFKVGSCT 362 (381)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~~ 362 (381)
+.++.+......++++++ + .. +...+..+....++..+..|.|.++++. |+ +..++.....+..+..+++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~-~---~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~-s~~~~~~~~~~~~l~~~~g~l 297 (412)
T TIGR02332 224 AFAHAAMPQRSMLREIFT-P---AI-MLYTLAYFCLTNTLSAINIWTPQILQSFNQGS-SNIMIGLLAAIPQFCTIFGMI 297 (412)
T ss_pred ccccccccHHHHHHHhcC-h---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-cHHHhHHHhhHHHHHHHHHHH
Confidence 000000011112333332 2 22 2233333444455677888999999885 45 455666677777777777777
Q ss_pred HHH
Q 016882 363 LFF 365 (381)
Q Consensus 363 ~~~ 365 (381)
++.
T Consensus 298 ~~g 300 (412)
T TIGR02332 298 WWS 300 (412)
T ss_pred HHH
Confidence 644
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=3.6e-25 Score=210.86 Aligned_cols=270 Identities=13% Similarity=0.091 Sum_probs=198.6
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
....++++...++....+...|.+.++ +|++..+.+++.+++.+++.+++++.|+++||+|||+++.++.++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLAD-------LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 445556667777777778888888887 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 016882 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 214 (381)
+++.++++++++++.+++.|++.|++.|...+....++.|++|+++|++++++.+.+..+|..+++.+++.+.+.. +||
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~ 177 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWR 177 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHH
Confidence 9999999999999999999999999999889999999999999999999999999999999999999999998887 999
Q ss_pred HHHHhhHHHHHHH-HHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccc
Q 016882 215 YMYGASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDK 293 (381)
Q Consensus 215 ~~f~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (381)
+.|++.+++.++. ++..+++||+|++.... +.++. + ++++ +..++ ++++
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~---~~~~~--~-~~~~--------------------~~~~~----~~~~ 227 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLP---SVGEW--R-HDAL--------------------ELAQQ----QEGA 227 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCC---Ccccc--c-cccc--------------------ccchh----cccc
Confidence 9999988877654 34445678876532100 00000 0 0000 00000 0000
Q ss_pred cccchh-----hccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHH-HcCCCCCchhHHHHHHHHHHHHHHhHHHHHH
Q 016882 294 EVSLRE-----VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKVGSCTLFFMS 367 (381)
Q Consensus 294 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 367 (381)
+.++++ .++++..+.. .+..+.....+..+..|.|.+++ +.|+ +..++.....++.+..+++.+++...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~l~~~~g~-s~~~a~~~~~~~~~~~~~g~~~~g~l 302 (434)
T PRK11663 228 GLSRKEILTKYVLLNPYIWLL----SFSYVLVYVVRAAINDWGNLYMSETLGV-DLVTANSAVSMFELGGFIGALVAGWG 302 (434)
T ss_pred CCChhhhHHHHHhcChHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhccCC-CHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 111222 3333322222 22222222334556678888875 4688 66777777888888888888875544
No 11
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=2.7e-24 Score=207.88 Aligned_cols=268 Identities=19% Similarity=0.265 Sum_probs=189.0
Q ss_pred HHHHHHHHHhhhcccccccccccccccCCCCCCCccccCC--hh--HHHH--HHHHHHHHHHHHHHHHHHHHHhhchHHH
Q 016882 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLS--SV--EIGL--ITSGSLYGALIGSILAFNIADILGRRRE 126 (381)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~--~~~~~~~~~~~~~~~~g~l~d~~Grk~~ 126 (381)
..+..++++++.++|...++...|.+.++ ++.+ +. ..+. +.++.++++.++++++|+++||+|||++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 89 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKV-------FFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKI 89 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 34556778899999999999988888776 4322 21 1222 2477889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchHHH--------HHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHH
Q 016882 127 LILAALLYLVGALVTALAPDFII--------MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG 198 (381)
Q Consensus 127 l~~~~~~~~~~~~~~~~~~~~~~--------~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 198 (381)
+.++++++++++++++++++++. ++++|+++|++.|+..+...+++.|++|+++|++..++...+..+|..+
T Consensus 90 l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~l 169 (490)
T PRK10642 90 LAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVL 169 (490)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999864 8899999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHhhc-------ccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCC
Q 016882 199 GYGIGSLLVD-------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSI 271 (381)
Q Consensus 199 ~~~~~~~l~~-------~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (381)
++.+...+.. ...|||+.|++.+++.++.+++..++||+|++...++ +.++..
T Consensus 170 g~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~---------~~~~~~----------- 229 (490)
T PRK10642 170 GAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVD---------KLEQGD----------- 229 (490)
T ss_pred HHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHH---------hhhhhc-----------
Confidence 8876654432 1239999999988776666666667899998643221 000000
Q ss_pred CCCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHH
Q 016882 272 GDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVS 350 (381)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 350 (381)
. + . ..+.++.++++++++ +++...+..... +.....++.+..|.|.++++ .|+ +...+....
T Consensus 230 ~--------~---~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~l~~~~g~-s~~~~~~~~ 292 (490)
T PRK10642 230 R--------E---G---LQDGPKVSFKEIATK-HWRSLLTCIGLV-IATNVTYYMLLTYMPSYLSHNLHY-SEDHGVLII 292 (490)
T ss_pred c--------c---c---ccccccCCHHHHHHH-hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHH
Confidence 0 0 0 001112345566653 233333333222 22334456677788888864 588 545555555
Q ss_pred HHHHHHHHHHhHHH
Q 016882 351 ILLGLFKVGSCTLF 364 (381)
Q Consensus 351 ~~~~~~~~i~~~~~ 364 (381)
....+..+++.+++
T Consensus 293 ~~~~~~~~~~~~~~ 306 (490)
T PRK10642 293 IAIMIGMLFVQPVM 306 (490)
T ss_pred HHHHHHHHHHHHHH
Confidence 56666666665553
No 12
>TIGR00898 2A0119 cation transport protein.
Probab=99.93 E-value=2.9e-24 Score=208.81 Aligned_cols=264 Identities=22% Similarity=0.321 Sum_probs=194.9
Q ss_pred cccccccCCCCCCCccccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHH
Q 016882 73 CATISIESPTLSGISWYDLS---SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (381)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 149 (381)
...+.+.+| +|++ ..+.+++.+++.++..++++++|+++||+|||++++++.++..++.++.+++++++.
T Consensus 110 ~~~~~i~~e-------~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (505)
T TIGR00898 110 TFSSTIVTE-------WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTV 182 (505)
T ss_pred cccccEEEE-------ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 345666665 7998 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH
Q 016882 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
++++|++.|++.+...+...+++.|++|+++|+.+.++...+..+|.++++.++..+. +||+.|++.+++.++..+
T Consensus 183 ~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~ 258 (505)
T TIGR00898 183 FLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFL 258 (505)
T ss_pred HHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887663 599999999999888777
Q ss_pred HHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchHHH
Q 016882 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (381)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (381)
..+++||+|+|+..++ +.+|+++.+++..+.+......+..+. ..+.+.+++.++.+++++++++..+..
T Consensus 259 ~~~~~~esp~~l~~~~---------~~~~a~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~ 328 (505)
T TIGR00898 259 LSWFVPESPRWLISQG---------RIEEALKILQRIAKINGKKLPAEVLSL-SLEKDLSSSKKQYSFLDLFRTPNLRKT 328 (505)
T ss_pred HHHhcCCChHHHHHCC---------CHHHHHHHHHHHHHHcCCCCCHHHHhh-hhhhhhhhccCCCcHHHHhCChHHHHH
Confidence 7788999999987765 456666666665433322211111111 101111112224577889988877776
Q ss_pred HHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 310 IIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
.+.+.+.++.....++.. +......+. + ......+.++..+++.++..
T Consensus 329 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~---~~~~~~~~~~~~i~~~~~~~ 376 (505)
T TIGR00898 329 TLCLMMLWFTTAFSYYGL----VLDLGNLGG-N---IYLDLFISGLVELPAKLITL 376 (505)
T ss_pred HHHHHHHHHHHHHHHHHH----hccccccCC-C---hHHHHHHHHHHHHHHHHHHH
Confidence 666555555432222222 222333344 1 33444455555566655543
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=6.8e-24 Score=200.57 Aligned_cols=264 Identities=25% Similarity=0.304 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHH
Q 016882 49 AAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI 128 (381)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~ 128 (381)
+.+..........+.++++....+...|.+.++ +|.++.+.+++.+.+.++..+++++.|+++||+|||+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 84 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQE-------FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILI 84 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 445555667777788899999999999999887 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 129 LAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
.+.++.+++.+++.++++++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++.++..+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 85 VSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred ccchhHHHHHhhHHHHHHHHH-HHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhh
Q 016882 209 LVAGWRYMYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELS 287 (381)
Q Consensus 209 ~~~~w~~~f~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (381)
.. +||+.|++.+++.++.++ ...++||+|++...+. + .++.
T Consensus 165 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~----~~~~---------------------------- 206 (406)
T PRK11551 165 DA-AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAG-----A----GKQR---------------------------- 206 (406)
T ss_pred cc-CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccC-----c----chhh----------------------------
Confidence 76 999999998877665443 4455788765321100 0 0000
Q ss_pred hccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 288 YVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+...+..++++..++... .....+......+....|.|.++++.|+ +...........++..+++.++..
T Consensus 207 ------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g 276 (406)
T PRK11551 207 ------APVLRALFGEGRATATLL-LWISYFFTLIVLYFLLNWLPSLLVGQGL-SRSQAGLVQIAFNIGGALGSLLIG 276 (406)
T ss_pred ------hhhHHHHhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCC-ChhhhhHHHHHHHHHHHHHHHHHH
Confidence 000011111111111111 1111222223345566788899888888 667777777777788877777644
No 14
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.93 E-value=8.3e-24 Score=199.51 Aligned_cols=183 Identities=24% Similarity=0.369 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q 016882 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (381)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~ 130 (381)
+..+....++++..+++....+...+.+.++ +|++..+.+++.+++.++..+++++.|+++||+|||+++.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~ 83 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGE-------FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTS 83 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3445667778888899999999999999887 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc
Q 016882 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (381)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 210 (381)
.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 84 IVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred c-hhHHHHHhhHHHHHHHHHHHhhcccchhH
Q 016882 211 A-GWRYMYGASTPLAVIMGMGMWWLPASPRW 240 (381)
Q Consensus 211 ~-~w~~~f~i~~~~~~~~~~~~~~~~~~~~~ 240 (381)
+ +||+.|++.+++.++.++.....||++++
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 194 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALWLRKNIPEAEDW 194 (405)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 2 49999998777766666666667887654
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=9.2e-24 Score=200.94 Aligned_cols=268 Identities=16% Similarity=0.214 Sum_probs=199.5
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 016882 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (381)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~ 133 (381)
++...++++..+++.....+..|.+.++ +|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKAD-------LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 3556677778888888888899988877 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchh
Q 016882 134 YLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213 (381)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 213 (381)
.+++.++++++++++.++++|++.|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.+.+.+.+.. +|
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w 171 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GW 171 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888877 99
Q ss_pred HHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccc
Q 016882 214 RYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDK 293 (381)
Q Consensus 214 ~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (381)
|+.|++.++..++.+......||++++...+. ..+ .++.. ...+..
T Consensus 172 ~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~---------------------~~~--~~~~~-----------~~~~~~ 217 (426)
T PRK12307 172 RAAFFVGLLPVLLVIYIRARAPESKEWEEAKL---------------------SGK--GKHSQ-----------SAWSVF 217 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCChHHHHhhh---------------------hcc--ccccc-----------cchhhh
Confidence 99998865443333322223455443211000 000 00000 000011
Q ss_pred cccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 294 EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+.+++++++++.++.......+.++ .+.....+..+.|.++++.|+ +.........+.++..+++.+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~g~~~~g 287 (426)
T PRK12307 218 SLSMKGLFNRAQFPLTLCVFIVLFS-IFGANWPIFGLLPTYLAGEGF-DTGVVSNLMTAAAFGTVLGNIVWG 287 (426)
T ss_pred hHHHHHHHhhchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2245677777655544443333222 223333456678888888888 556666666677777777777644
No 16
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.93 E-value=8.9e-24 Score=201.27 Aligned_cols=183 Identities=19% Similarity=0.254 Sum_probs=144.9
Q ss_pred HHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHH---HHHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q 016882 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLI---TSGSLYGALIGSILAFNIADILGRRRELIL 129 (381)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~ 129 (381)
.++..+++++..++|...++...|.+.++-.+ .+.+..+.+.. .++.+++..++++++|+++||+|||+++.+
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFCSLYFAHIFFP----SGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 44556677888999999999988888776111 03445544443 444555556999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhchHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHH
Q 016882 130 AALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYG 201 (381)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 201 (381)
+.++++++++++++++++. .++++|+++|++.|..++...+++.|++|+++|++..++.+.+...|..+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764 58899999999999999999999999999999999999998888888888877
Q ss_pred HHHHhhc-------ccchhHHHHHhhHHHHHHHHHHHhhcccchh
Q 016882 202 IGSLLVD-------LVAGWRYMYGASTPLAVIMGMGMWWLPASPR 239 (381)
Q Consensus 202 ~~~~l~~-------~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~ 239 (381)
+...+.. ...|||+.|++.+++.++.+......||+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~ 223 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQ 223 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 6655432 1239999999988887766554445666653
No 17
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.93 E-value=7.5e-24 Score=203.79 Aligned_cols=282 Identities=15% Similarity=0.097 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCCC---------------CccccCChhHHHHHHHHHHHHHHHHHHHHH
Q 016882 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG---------------ISWYDLSSVEIGLITSGSLYGALIGSILAF 115 (381)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 115 (381)
+.+..++.++....+.++...+.+.+.+.++.... ..+++++..+.|++.+.+.+++.+++++.|
T Consensus 18 ~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g 97 (465)
T TIGR00894 18 LFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVG 97 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchH
Confidence 34446666666778889999988888776521110 114799999999999999999999999999
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHH
Q 016882 116 NIADILGRRRELILAALLYLVGALVTALA--PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIV 193 (381)
Q Consensus 116 ~l~d~~Grk~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 193 (381)
+++||+|||+++.++.+++.++.+++.++ .+++.+++.|++.|++.+...+....++.|++|+++|++++++...+..
T Consensus 98 ~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 177 (465)
T TIGR00894 98 YLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQ 177 (465)
T ss_pred HHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888877554 5688899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh-cccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCC
Q 016882 194 LGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIG 272 (381)
Q Consensus 194 ~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (381)
+|.++++++++.+.+...+||+.|++.++++++..+++++ .+|+|+.. ++. .++|. +.+++. ...
T Consensus 178 ~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~------~~~----~~~~~-~~i~~~---~~~ 243 (465)
T TIGR00894 178 LGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH------PCI----SKFEK-KYINSS---LQG 243 (465)
T ss_pred HHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC------CCC----CHHHH-HHHHhh---ccc
Confidence 9999999999999876239999999999988876655544 55665420 000 00111 111100 000
Q ss_pred CCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHH
Q 016882 273 DSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSI 351 (381)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 351 (381)
++++.+++..++++++++..+. ..+..+....+++.+..|.|.++++ .|+ +..++.....
T Consensus 244 --------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~lp~~l~~~~g~-s~~~~g~~~~ 304 (465)
T TIGR00894 244 --------------QKGSTRQSLPIKAIPKSLPVWA----IWFAIFGHFWLYTILPTYLPTFISWVLRV-SGKENGLLSS 304 (465)
T ss_pred --------------ccCCCCCCCCHHHHhcCHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHhHHHHH
Confidence 0001112334677777643333 3333344444567777888888765 588 6677777777
Q ss_pred HHHHHHHHHhHHHH
Q 016882 352 LLGLFKVGSCTLFF 365 (381)
Q Consensus 352 ~~~~~~~i~~~~~~ 365 (381)
+..+..+++.+++-
T Consensus 305 ~~~~~~~i~~~~~g 318 (465)
T TIGR00894 305 LPYLFAWLCSIFAG 318 (465)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777766644
No 18
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=6.1e-24 Score=199.79 Aligned_cols=242 Identities=20% Similarity=0.261 Sum_probs=184.8
Q ss_pred hhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 016882 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~ 141 (381)
+..........+.+|.+.++ +|.+..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++..++++++
T Consensus 19 ~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 91 (390)
T PRK03545 19 FIFNTTEFVPVGLLSDIAQS-------FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLS 91 (390)
T ss_pred HHHHhHHHHHHcchHHHHhH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHH
Confidence 33333434455567888887 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhH
Q 016882 142 ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAST 221 (381)
Q Consensus 142 ~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~ 221 (381)
++++|++.++++|++.|++.+...+...+++.|++|+++|++++++...+..+|..++|++++.+.+.. |||+.|++.+
T Consensus 92 ~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~ 170 (390)
T PRK03545 92 ALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTFLAIG 170 (390)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHHHHHH
Confidence 999999999999999999999888999999999999999999999999999999999999999998877 9999999999
Q ss_pred HHHHHHHHHHh-hcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhh
Q 016882 222 PLAVIMGMGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300 (381)
Q Consensus 222 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (381)
+++++..+..+ +.|+.|+. + +....+.++.
T Consensus 171 ~~~~l~~~~~~~~~~~~~~~-----------------~--------------------------------~~~~~~~~~~ 201 (390)
T PRK03545 171 GGALITLLLLIKLLPLLPSE-----------------H--------------------------------SGSLKSLPLL 201 (390)
T ss_pred HHHHHHHHHHHHhCCCCCCC-----------------C--------------------------------cchHHHHHHH
Confidence 88776554433 35553210 0 0000123456
Q ss_pred ccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
++++..+.......+.... ......|.+.++++ .|+ +.........+.++..+++.++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~-s~~~~~~~~~~~~~~~~~g~~~~g 262 (390)
T PRK03545 202 FRRPALVSLYLLTVVVVTA----HFTAYSYIEPFVQQVAGL-SENFATLLLLLFGGAGIIGSVLFS 262 (390)
T ss_pred HhCcHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCC-CccHHHHHHHHHHHHHHHHHHHHH
Confidence 6666544433332222221 22233455555554 588 666777777777778888877644
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.93 E-value=1.2e-23 Score=197.77 Aligned_cols=234 Identities=19% Similarity=0.266 Sum_probs=180.2
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHH
Q 016882 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (381)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 149 (381)
...+.+|.+.++ +|.++++.++..+++.++..+++++.|++.||+|||+.+..+.++.+++.+++.++++++.
T Consensus 38 ~~~~~l~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (394)
T PRK10213 38 LPVSLLTPMAQD-------LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSL 110 (394)
T ss_pred HHHhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHH
Confidence 444456777776 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH
Q 016882 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
++++|++.|++.+...+....++.|++|+++|++++++...+.++|.+++|.+++.+.+.. +||+.|++.+++++++.+
T Consensus 111 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 111 LLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999887 999999998877766544
Q ss_pred HHh-hcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchHH
Q 016882 230 GMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA 308 (381)
Q Consensus 230 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (381)
... ..||+|+. + ++...+.++.++++..+.
T Consensus 190 ~~~~~~p~~~~~----------------~---------------------------------~~~~~~~~~~l~~~~~~~ 220 (394)
T PRK10213 190 WIIKSLPSLPGE----------------P---------------------------------SHQKQNTFRLLQRPGVMA 220 (394)
T ss_pred HHHHHCCCCCcc----------------c---------------------------------ccchhHHHHHhcCHHHHH
Confidence 333 34553210 0 000011234555544433
Q ss_pred HHHHHHHHHHHHhhchhHH-HhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 309 LIIGAGLVLFQQITGQPSV-LYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
..+...+.. .+.... .+..|.+.++.|+ +.+.........++..+++.++.-
T Consensus 221 ~~~~~~~~~----~~~~~~~~~~~p~~~~~~g~-s~~~~g~~~~~~~~~~iig~~~~~ 273 (394)
T PRK10213 221 GMIAIFMSF----AGQFAFFTYIRPVYMNLAGF-GVDGLTLVLLSFGIASFVGTSLSS 273 (394)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHH
Confidence 322222221 222333 3345777777898 666677777777777788776533
No 20
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.5e-24 Score=202.68 Aligned_cols=291 Identities=16% Similarity=0.156 Sum_probs=223.8
Q ss_pred CchhHHHHHHHHHHHHHHhhhccccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016882 44 NYSVSAAILPFLFPALGGLLYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG 122 (381)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G 122 (381)
+..++..+.++..++..++....+...++.+... +.+| +++...+.+.+.+++.++++++.++++.|.||++
T Consensus 37 ~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~ed-------l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ 109 (495)
T KOG2533|consen 37 KLLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKED-------LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP 109 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccc-------cchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC
Confidence 3445555566677777788888887766654433 3343 7899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHH
Q 016882 123 RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGI 202 (381)
Q Consensus 123 rk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 202 (381)
..+.+....+++++..++....+|++.+++.|++.|+.+++.+|....+++.|+.+++|+..++++....++|.++|.++
T Consensus 110 ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggli 189 (495)
T KOG2533|consen 110 LSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLI 189 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHH
Confidence 99999999999998888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc-----ccchhHHHHHhhHHHHHHHH-HHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCCh
Q 016882 203 GSLLVD-----LVAGWRYMYGASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAP 276 (381)
Q Consensus 203 ~~~l~~-----~~~~w~~~f~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (381)
+..+.. ...||||.|++.++++++.. +..+++|+.|.... ...++|.+-..++++.++...
T Consensus 190 A~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~----------fl~~~ek~~~~~~~~~~~~~~--- 256 (495)
T KOG2533|consen 190 AYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAW----------FLTDEEKELVVERLRESPSGG--- 256 (495)
T ss_pred HHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcc----------ccchHHHHHHHHHHHhccCCC---
Confidence 999642 22499999999999998855 55566999886210 001122221122222111110
Q ss_pred hhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHH
Q 016882 277 TEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGL 355 (381)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 355 (381)
.+++.++.++++.++++..++..++.++... ..+.+.+|+|.++++ .|+ +..++...++...+
T Consensus 257 -----------~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~l----v~~~~~~~lpl~l~~~~~~-s~~~a~~ls~~~~~ 320 (495)
T KOG2533|consen 257 -----------IENKFKWKGFKEALKDPGVWPFSLCYFFLKL----VNYGFSYWLPLYLKSNGGY-SELQANLLSTPYDV 320 (495)
T ss_pred -----------cccccCHHHHHHHHhchhHHHHHHHHHHHhh----ccccHHHHHHHHHHcCCCc-ChHHhccccchHHh
Confidence 0112456778888888766655544443333 347788999999998 468 88899999999999
Q ss_pred HHHHHhHHHHHHHHH
Q 016882 356 FKVGSCTLFFMSNVY 370 (381)
Q Consensus 356 ~~~i~~~~~~~~~~~ 370 (381)
.++++.+++.+.+..
T Consensus 321 ~g~v~~i~ag~lsdr 335 (495)
T KOG2533|consen 321 GGIVGLILAGYLSDR 335 (495)
T ss_pred hhHHHHHHHHHHHHH
Confidence 999999998766544
No 21
>TIGR00895 2A0115 benzoate transport.
Probab=99.93 E-value=8.9e-24 Score=198.66 Aligned_cols=286 Identities=23% Similarity=0.352 Sum_probs=203.8
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
+...+..+..+++........|.+.++ +|.+..+.+++.++..++..++.++.|+++||+|||+.+..+.++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 20 ILSFLIMLMDGYDLAAMGFAAPAISAE-------WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 344445566666666777778888777 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 016882 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 214 (381)
+++.++..+.++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+.. +|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~ 171 (398)
T TIGR00895 93 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWR 171 (398)
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-cce
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998887 999
Q ss_pred HHHHhhHHHHHH-HHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccc
Q 016882 215 YMYGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDK 293 (381)
Q Consensus 215 ~~f~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (381)
+.|++.+++.++ .++...++||++++...++ .++.++..++.......+... +..+ .+.+.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~ 236 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESIDFLVSKR----------PETVRRIVNAIAPQMQAEAQS-ALPE----QKATQGTK 236 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCChHHHhcC----------HHHHHHHHHHHHHhccccccc-cccc----cccccchh
Confidence 999998766555 4455566888876543321 122222222221111111000 0000 00000111
Q ss_pred cccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 294 EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+..++.+++++..+........ .+.....+.....|.|++.++.|+ +.........+..+..+++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 306 (398)
T TIGR00895 237 RSVFKALFQGKTARITVLLWLL-YFMLLVGVYFLTNWLPKLMVELGF-SLSLAATGGALFNFGGVIGSIIFG 306 (398)
T ss_pred hHHHHHHhcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122233433333333332222 233334456677788888888888 666777777777877777777754
No 22
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.9e-26 Score=208.46 Aligned_cols=274 Identities=19% Similarity=0.218 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q 016882 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (381)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~ 129 (381)
....++++++.+.++..|...+....+...+. +|++++..|++.+++.+.+++.+|+.|+++||+.||+++.+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~-------fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTY-------FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHh-------cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 34455777888899999999999999888887 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
|.++|.++.+++++++.+|++.++|.+.|+|.+...++.+++++|.+|.++|++++++++.+..+|..+|...+..+.+.
T Consensus 104 G~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cchhHHHHHhhHHHHHHHHHHHhh-cccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhh
Q 016882 210 VAGWRYMYGASTPLAVIMGMGMWW-LPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSY 288 (381)
Q Consensus 210 ~~~w~~~f~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (381)
...|||.|+..+++++++.++.++ .+|+++.-. +|. .+.... ..
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~--------------~~~-------~~~~~~--------------~~ 228 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPERGAR--------------DEV-------DGENKM--------------VK 228 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCcccccc--------------ccc-------ccCCcC--------------CC
Confidence 756999999999999987666555 555433100 000 000000 00
Q ss_pred ccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHH----HHHcCCCCCchhHHHHHHHHHHHHHHhHHH
Q 016882 289 VGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASI----LQSAGFSAASDATRVSILLGLFKVGSCTLF 364 (381)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 364 (381)
.......+.+.+.+++..+...+......+.. ..+.+|.|.+ .+-.|+ +..+......+....+.+|++.|
T Consensus 229 ~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~----Gs~sww~p~~~~~~~~~~~~-~~~~~~ifg~vt~~~G~lGvl~G 303 (493)
T KOG1330|consen 229 PFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVI----GSLSWWAPAFIYYSYELIGF-DHNATLIFGGVTCAGGSLGVLFG 303 (493)
T ss_pred CccchHHHHHHHHccCceeeehHHHHHHHHhc----cccchhhhhHHHHHHHHhCC-ccccchhhhhHHHhhchhhheeh
Confidence 01111122233333343343344444444432 3344444444 334466 66777888888888888888887
Q ss_pred HHHHHH
Q 016882 365 FMSNVY 370 (381)
Q Consensus 365 ~~~~~~ 370 (381)
-+.+..
T Consensus 304 giisd~ 309 (493)
T KOG1330|consen 304 GIISDK 309 (493)
T ss_pred HHHHHH
Confidence 766444
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=3.9e-23 Score=200.04 Aligned_cols=180 Identities=17% Similarity=0.169 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q 016882 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (381)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~ 130 (381)
+..++.++++.++..+|.+..+.++|++.++ +|.+.++.+|+.+.+.++..++.+++|+++||+|||++++++
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~-------l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~ 77 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMT-------LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLG 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 4456778888899999999999999999988 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhC-CcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
.++..++.+++++++|++.++++|++.|+|.+...+.....+.+.+ |+++|++++++......+|..+||.+++.+.++
T Consensus 78 ~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 78 GTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999998888877777765 789999999999999999999999999999998
Q ss_pred cchhHHHHHhhHHHHHHHHH-HHhhcccch
Q 016882 210 VAGWRYMYGASTPLAVIMGM-GMWWLPASP 238 (381)
Q Consensus 210 ~~~w~~~f~i~~~~~~~~~~-~~~~~~~~~ 238 (381)
. +|||.|++...+.++.++ ..+++|+++
T Consensus 158 ~-gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 158 F-YWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred C-ChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 7 999999998887776544 444567654
No 24
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=3.1e-24 Score=206.43 Aligned_cols=281 Identities=17% Similarity=0.097 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q 016882 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (381)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~ 129 (381)
.+..+....++++..+.++...+...|.+.++ +|++..+.|++.+++.+++.+++++.|+++||+|||+++.+
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~ 99 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMIST-------YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPF 99 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHH
Confidence 45566777778888888999999999999888 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-----hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHH
Q 016882 130 AALLYLVGALVTAL-----APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (381)
Q Consensus 130 ~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 204 (381)
+.++++++.++.++ +++++.++++|++.|++.+...+....+++|++|+++|++++++++.+..+|.++++.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 100 LLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence 88888877776665 5899999999999999999999999999999999999999999999999999999999987
Q ss_pred Hhhccc--chhHHHHHhhHHHHHHHHHHH-hhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHH
Q 016882 205 LLVDLV--AGWRYMYGASTPLAVIMGMGM-WWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDE 281 (381)
Q Consensus 205 ~l~~~~--~~w~~~f~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (381)
++.+.. ++||..|.+.+++.++..+.. ++.+++|+..... ..+| . .... .. .++
T Consensus 180 ~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~----------~~~~---~---~~~~-~~------~~~ 236 (467)
T PRK09556 180 WGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG----------KAEE---I---FGEP-IS------EED 236 (467)
T ss_pred HHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC----------Chhh---c---ccCc-cc------hhh
Confidence 766532 369999998888877654444 4456666421000 0000 0 0000 00 000
Q ss_pred HHHhhhhcccccccc-chhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHHHHHH
Q 016882 282 ILTELSYVGEDKEVS-LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKVG 359 (381)
Q Consensus 282 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i 359 (381)
++.++++...... .+..++++..+.. .+..+.....+.....|.|.++++ .|+ +..++........+..++
T Consensus 237 --~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~p~yl~~~~g~-s~~~a~~~~~~~~~~~~i 309 (467)
T PRK09556 237 --KETESTDMTKWQIFVEYVLKNPVIWLL----CFANIFLYIVRIGIDNWSPVYAFQELGF-SKEDAINTFTLFEIGALV 309 (467)
T ss_pred --hccccccCcHHHHHHHHHHcChHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHHHHHHHHH
Confidence 0000000000000 1124555433322 222233333345677888887755 688 667777777778888888
Q ss_pred HhHHHHHH
Q 016882 360 SCTLFFMS 367 (381)
Q Consensus 360 ~~~~~~~~ 367 (381)
+.+++...
T Consensus 310 g~~~~G~l 317 (467)
T PRK09556 310 GSLLWGWL 317 (467)
T ss_pred HHHHHHHH
Confidence 88876544
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=6.4e-24 Score=197.20 Aligned_cols=233 Identities=17% Similarity=0.058 Sum_probs=169.7
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHH
Q 016882 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (381)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 149 (381)
..++..|.+.+| +|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+......+.......++++.
T Consensus 9 ~~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 9 TFSPVLSLVAED-------IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred HHHhhHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 445667888777 8999999999999999999999999999999999998876655554444333333379999
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHH-
Q 016882 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG- 228 (381)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~- 228 (381)
++++|++.|++.+. .......++|++|+++|++++++.+.+..+|.++++.+++++.+.. |||+.|++.++++++..
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHH
Confidence 99999999999986 4555666799999999999999999999999999999999999876 99999999888877654
Q ss_pred HHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchHH
Q 016882 229 MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKA 308 (381)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (381)
+..+++||+|++. + ++ .+ . ++. ..+++++++++..+.
T Consensus 160 ~~~~~lp~~p~~~---~----~~---------------------~~-~---~~~-----------~~~~~~ll~~~~~~~ 196 (368)
T TIGR00903 160 LVLAALPALPFQA---A----EG---------------------FG-F---KDA-----------VKEFGALAGRKDLWI 196 (368)
T ss_pred HHHHHcCCCCCCC---C----CC---------------------cc-h---HHH-----------HHHHHHHHcChhHHH
Confidence 4555688887531 0 00 00 0 000 012567777754443
Q ss_pred HHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHH
Q 016882 309 LIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGS 360 (381)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~ 360 (381)
..+ ..+.....++.+..|.|.++++.|+ +.+ +.....+..+.+.++
T Consensus 197 ~~~----~~~~~~~~~~~~~~wlp~~L~~~g~-s~~-~~~~~~l~~~~g~~g 242 (368)
T TIGR00903 197 IGA----ILGFGVALFDNLAIWLEAALRPAGL-EDI-AGDAVALAILAGLIG 242 (368)
T ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHHCCC-ChH-HHHHHHHHHHHHHHH
Confidence 333 2333444456778899999998887 433 334444444444444
No 26
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4.6e-23 Score=194.62 Aligned_cols=251 Identities=23% Similarity=0.230 Sum_probs=204.2
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHhhHh
Q 016882 88 WYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAM 165 (381)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~ 165 (381)
++++++.+.+++.+.+++|+.+++++.|++.||+|.|+++..+.++.++++++...+. +++.+++.|+++|++.|..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 3799999999999999999999999999999999999999999999999999998865 45688999999999999999
Q ss_pred HHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh-cccchhHHHHh
Q 016882 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPASPRWLLLC 244 (381)
Q Consensus 166 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~-~~~~~~~~~~~ 244 (381)
|....+...|.|+++|++..++...+..+|.+++.++++.+.+...||++.|++.++++++..+++++ ..|+|......
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~i 226 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNI 226 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 99999999999999999999999999999999999999999998449999999999999997766655 56666531110
Q ss_pred hccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccc--cccccchhhccccchHHHHHHHHHHHHHHhh
Q 016882 245 AMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGE--DKEVSLREVFHGKCLKALIIGAGLVLFQQIT 322 (381)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (381)
.++|.+ ...++..++.. .++.+|+++++++..+ .+.+..+....
T Consensus 227 ----------s~~El~--------------------~I~~~k~~~~~~~~~~vP~~~i~ts~~vw----ai~~~~f~~~~ 272 (466)
T KOG2532|consen 227 ----------SEKELK--------------------YIEKGKSEAHVKKKPPVPYKAILTSPPVW----AIWISAFGGNW 272 (466)
T ss_pred ----------CHHHHH--------------------HHHhcccccccCCCCCCCHHHHHcCHHHH----HHHHHHHHHHH
Confidence 011111 11111111111 1467899999985433 34445566666
Q ss_pred chhHHHhcHHHHHHHc-CCCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 016882 323 GQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKVGSCTLFFMSNVYFFC 373 (381)
Q Consensus 323 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 373 (381)
++..+..|.|.|+++. |+ +..+.+..+.+..+...+..+++...+.++.+
T Consensus 273 ~~~~l~~y~PtY~~~VL~f-~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 273 GFYLLLTYLPTYLKEVLGF-DVRETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred HHHHHHHHhhHHHHHHhCC-ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7889999999999986 88 88899999999999999998888877766644
No 27
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.92 E-value=3.1e-23 Score=196.13 Aligned_cols=176 Identities=16% Similarity=0.228 Sum_probs=156.3
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
....+..+...+......+.+|.+.++ +|.+..+.++..+++.+++.++++++|+++||+|||++++.+.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~p~l~~i~~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 91 (413)
T PRK15403 19 MALILYDFAAYLTTDLIQPGIINVVRD-------FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIF 91 (413)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHH
Confidence 444555566677788888889988877 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 016882 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 214 (381)
+++.+++.++++++.++++|++.|++.+...+....++.|++|+++|++.+++......+|..++|.+++.+.+.. +||
T Consensus 92 ~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~ 170 (413)
T PRK15403 92 TLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWK 170 (413)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHH
Confidence 9999999999999999999999999988777777888999999999999999999999999999999999988776 999
Q ss_pred HHHHhhHHHHHHHHHH-Hhhcccch
Q 016882 215 YMYGASTPLAVIMGMG-MWWLPASP 238 (381)
Q Consensus 215 ~~f~i~~~~~~~~~~~-~~~~~~~~ 238 (381)
+.|++.+++.++..+. .+++||++
T Consensus 171 ~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999887776554 34577764
No 28
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.92 E-value=3e-29 Score=240.34 Aligned_cols=293 Identities=34% Similarity=0.561 Sum_probs=226.2
Q ss_pred HHHHHhhhcccccccccccccccCC---CCCCCcc-ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 016882 57 PALGGLLYGYDIGSTSCATISIESP---TLSGISW-YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (381)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~ 132 (381)
+.++.+..+++....+...+..... .....++ .+.+..+.++..+...+|..+|++++|.++||+|||+.+.++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 3445577777777766655444411 1111111 11244678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc---hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 133 LYLVGALVTALAP---DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 133 ~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
+..++.++.++++ +++.+.++|++.|++.|+..+....++.|..|+++|+...++.+.++.+|.+++..++..+...
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999998887766443
Q ss_pred c--chhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhh
Q 016882 210 V--AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELS 287 (381)
Q Consensus 210 ~--~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (381)
. .+||+.+++.++++++.++..+++||||+|+..++ +++|+++.++++++.+..+++. +++.++.+
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~---------~~~~A~~~l~~~~~~~~~~~~~---~~~~~~~~ 232 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKG---------RDEEAEKVLRKLRGKEIEDEEI---EEIKAEKK 232 (451)
T ss_pred cccccccccccccccccccccccccccccccceecccc---------cccccccccccccccccccccc---cccccccc
Confidence 3 25999999999999888888888999999998877 6788888888877664433222 22222211
Q ss_pred hccccccccchhhccccc-hHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 288 YVGEDKEVSLREVFHGKC-LKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+ .++++.+++++++++. ++++.+.+.+..+.++.+++...+|.+.+++..|.++ . ...+.+.++..+++++++.
T Consensus 233 ~-~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~ 307 (451)
T PF00083_consen 233 E-SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISN-S--FLATLILGLVNFLGTLLAI 307 (451)
T ss_pred c-ccccceeeeecccccccccccccccccccccccccccccccccccccccccccc-c--ccccccccccccccccccc
Confidence 1 1122267888888764 5677777778888888888889999999999888733 2 5555666677777777664
No 29
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=1.4e-22 Score=190.64 Aligned_cols=237 Identities=17% Similarity=0.143 Sum_probs=183.3
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHH
Q 016882 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148 (381)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~ 148 (381)
...++..|.+.++ +|+|..+.+++.+.+.+++.+++++.|++.||+|||+++..+..+.+++.++++++++++
T Consensus 26 ~~~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~ 98 (393)
T PRK09705 26 TSVGPLLPQLRQA-------SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSA 98 (393)
T ss_pred hccchhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchH
Confidence 5677889999888 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHH
Q 016882 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (381)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~ 228 (381)
.++++|++.|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++.+.++..+||+.+.+.++..++.+
T Consensus 99 ~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 99 LLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997 78999999999999999999999999988875589998877666654433
Q ss_pred HHHhhcc-cchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchH
Q 016882 229 MGMWWLP-ASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK 307 (381)
Q Consensus 229 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (381)
+..++.. +.|+ + + +++ +...++.++++..+
T Consensus 178 ~~~~~~~~~~~~-----------------~--------------~-----------------~~~-~~~~~~~l~~~~~~ 208 (393)
T PRK09705 178 FAWWWQSAREVA-----------------S--------------S-----------------HKT-TTTPVRVVFTPRAW 208 (393)
T ss_pred HHHHHHhcCCCc-----------------c--------------c-----------------cCC-CcCCcccccCHhHH
Confidence 3332221 1110 0 0 000 01112333333222
Q ss_pred HHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHHHH
Q 016882 308 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFFMS 367 (381)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 367 (381)
... . ..+....++.....|.|.++++.|+ +..++.....+.++..+++.++....
T Consensus 209 ~l~---~-~~~~~~~~~~~~~~~lp~~l~~~g~-s~~~ag~~~~~~~i~~i~g~~~~g~l 263 (393)
T PRK09705 209 TLG---V-YFGLINGGYASLIAWLPAFYIEIGA-SAQYSGSLLALMTLGQAAGALLMPAM 263 (393)
T ss_pred HHH---H-HHHHHHHHHHHHHHHHHHHHHHcCC-ChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 222 2 2222233456677788888888898 77778888888889888888876533
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.92 E-value=1.4e-22 Score=195.11 Aligned_cols=256 Identities=13% Similarity=0.079 Sum_probs=177.6
Q ss_pred hhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 016882 63 LYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA 142 (381)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~ 142 (381)
...+......+..|.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++
T Consensus 47 ~~~~~~~~~~~~~~~l~~~-------~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~ 119 (476)
T PLN00028 47 TCFVSTFAAAPLLPIIRDN-------LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMS 119 (476)
T ss_pred HHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 3333444556677788777 899999999999999999999999999999999999999999999999999999
Q ss_pred HhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc----c----cchhH
Q 016882 143 LAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD----L----VAGWR 214 (381)
Q Consensus 143 ~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----~----~~~w~ 214 (381)
++++++.++++|++.|++.+... ....+++|++|+++|++++++.+....+|..+++.+.+.+.. . ..|||
T Consensus 120 ~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr 198 (476)
T PLN00028 120 LVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWR 198 (476)
T ss_pred HhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhH
Confidence 99999999999999999887654 456688999999999999999987777777777666554432 1 13899
Q ss_pred HHHHhhHHHHHHHHHHHhhccc-chhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccc
Q 016882 215 YMYGASTPLAVIMGMGMWWLPA-SPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDK 293 (381)
Q Consensus 215 ~~f~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (381)
+.|++.+++.++..+..+++++ .|+. ..++.++ +.. .++.+.
T Consensus 199 ~~f~i~g~l~l~~~l~~~~~~~~~p~~--------------~~~~~~~-------~~~----------------~~~~~~ 241 (476)
T PLN00028 199 IAFFVPGLLHIIMGILVLTLGQDLPDG--------------NYRELKK-------SGT----------------MPKDSF 241 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcCCCC--------------chhhHHh-------cCc----------------cccccH
Confidence 9999999988876655555443 3320 0000000 000 000000
Q ss_pred cccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHHHHHHHhHHHHHHH
Q 016882 294 EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKVGSCTLFFMSN 368 (381)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 368 (381)
...+++.++++..+...+. . +........+..+.|.++.+ .|+ +...+.....+.++..+++.+++...+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~p~~l~~~~g~-s~~~a~~~~~~~~~~~~ig~~~~G~ls 312 (476)
T PLN00028 242 SKVLRYGVTNYRTWILALT---Y-GYSFGVELTMDNIIAEYFYDRFGL-SLETAGAIAASFGLMNLFARPAGGYLS 312 (476)
T ss_pred HHHHHHHHcCchhHHHHHH---H-HHHHHHHHHHHhHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 1223445555433332222 1 22222223445566666554 588 777788888888888888888765443
No 31
>PRK15075 citrate-proton symporter; Provisional
Probab=99.91 E-value=1.5e-22 Score=192.98 Aligned_cols=256 Identities=17% Similarity=0.214 Sum_probs=178.5
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHH-HHHH-----HHHHHHHHHHHHHHHHhhchHHHH
Q 016882 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLI-TSGS-----LYGALIGSILAFNIADILGRRREL 127 (381)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~g~l~d~~Grk~~l 127 (381)
....+++.++.++|...++...|.+.++ ++.++.+.+.+ .+.. .++..+++++.|+++||+|||+.+
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 89 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-------FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL 89 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH
Confidence 4667778899999999999999999887 78777665443 3322 233357899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHH
Q 016882 128 ILAALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGG 199 (381)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 199 (381)
+.+.+++.++.++++++++++ .++++|++.|++.+...+....++.|++|+++|++++++...+..+|..++
T Consensus 90 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g 169 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFA 169 (434)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999877 468899999999999999889999999999999999999998888888888
Q ss_pred HHHHHHhh--------cccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCC
Q 016882 200 YGIGSLLV--------DLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSI 271 (381)
Q Consensus 200 ~~~~~~l~--------~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (381)
+.+++.+. +.. |||+.|++.++...+........||++++.. +.
T Consensus 170 ~~~g~~l~~~~~~~~~~~~-gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~---------------~~------------ 221 (434)
T PRK15075 170 ALLGYLLNQWLSPAQMAEW-GWRIPFLIGCLIVPFIFLIRRSLEETEEFLA---------------RK------------ 221 (434)
T ss_pred HHHHHHHHHhCCHHHHhcc-chHHHHHHHHHHHHHHHHHHHhcCCCHHHHH---------------hh------------
Confidence 88777663 344 9999999765443222221112223211100 00
Q ss_pred CCCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHH
Q 016882 272 GDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVS 350 (381)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 350 (381)
++.+.+..+++..++ ++.++......+.+..+++.+..|.|.++++ .|+ +..++....
T Consensus 222 -----------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~-~~~~~~~~~ 280 (434)
T PRK15075 222 -----------------HRPSMREIFRSLAAN---WRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHL-SAADSLLVT 280 (434)
T ss_pred -----------------hccccccHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHH
Confidence 000000111111111 2222222222233344567788889999887 588 666677777
Q ss_pred HHHHHHHHHHhHHHH
Q 016882 351 ILLGLFKVGSCTLFF 365 (381)
Q Consensus 351 ~~~~~~~~i~~~~~~ 365 (381)
.+.++..+++.+++.
T Consensus 281 ~~~~~~~~~~~~~~g 295 (434)
T PRK15075 281 LCVGVSNFIWLPIGG 295 (434)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777777777644
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=3.5e-23 Score=194.14 Aligned_cols=268 Identities=17% Similarity=0.183 Sum_probs=194.9
Q ss_pred hhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 016882 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~ 141 (381)
+...++....+...|.+.++ +|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQED-------LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ 76 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHh-------hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH
Confidence 34455666777778888777 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhH
Q 016882 142 ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAST 221 (381)
Q Consensus 142 ~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~ 221 (381)
+++++++.++++|++.|++.+...+....++.|++|+++|++.+++.+....+|.++++.+++.+.+.. +||+.|++.+
T Consensus 77 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~ 155 (399)
T TIGR00893 77 AFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEG 155 (399)
T ss_pred HHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999988887 8999999998
Q ss_pred HHHHHHHHHHh-hcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhh
Q 016882 222 PLAVIMGMGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300 (381)
Q Consensus 222 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (381)
++.++..+..+ +.||+|+... . . .+++.+...++...+. +.+++++.++...++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~------~-~---~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 211 (399)
T TIGR00893 156 VLGIIWGVLWLKFIPDPPQKAK------W-L---TEEEKYIVVGGLLAEQ--------------QGKGPSTPKKYQIKEL 211 (399)
T ss_pred HHHHHHHHHhhheecCCCCccc------c-C---CHHHHhhcchhhcccc--------------ccccccCCCccchHHH
Confidence 88777554444 4566543100 0 0 0011000000000000 0001112223445566
Q ss_pred ccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHHHHHHHhHHHHH
Q 016882 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKVGSCTLFFM 366 (381)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~~ 366 (381)
++++..+...+ ..+........+..+.|.++++ .|. +..+......+..+..+++.+++..
T Consensus 212 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (399)
T TIGR00893 212 LKDRRVWGLAL----GQFLVNIGLGFFLTWFPTYLVQERGL-SILEAGFMASLPGIVGFIGMILGGR 273 (399)
T ss_pred hcCHHHHHHHH----HHHHHHhHHHHHHHHHHHHHHHHhcc-cHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 66543332222 2222333345666777777765 577 6666777777777777777776543
No 33
>PRK09952 shikimate transporter; Provisional
Probab=99.91 E-value=3.8e-22 Score=190.28 Aligned_cols=181 Identities=20% Similarity=0.252 Sum_probs=145.2
Q ss_pred HHHHHHHHHhhhccccccccccccc-ccCCCCCCCccc-cCChhHHHHHH-----HHHHHHHHHHHHHHHHHHHhhchHH
Q 016882 53 PFLFPALGGLLYGYDIGSTSCATIS-IESPTLSGISWY-DLSSVEIGLIT-----SGSLYGALIGSILAFNIADILGRRR 125 (381)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~d~~Grk~ 125 (381)
......++++.+++|....+...+. +.++. + +.++. .+++. ++.+++..+++++.|+++||+|||+
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 23 AALGSFAGAVVDWYDFLLYGITAALVFNREF------FPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 4466667888899999888876654 33321 1 44444 34443 3455678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhchHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHH
Q 016882 126 ELILAALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV 197 (381)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 197 (381)
++.++.+++++++++++++++++ .++++|++.|++.|+..+....++.|++|+++|++..+..+.+..+|.+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999976 5889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcc-------cchhHHHHHhhHHHHHHHHHHHhhcccchhH
Q 016882 198 GGYGIGSLLVDL-------VAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240 (381)
Q Consensus 198 ~~~~~~~~l~~~-------~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~ 240 (381)
++..+...+... ..+||+.|++.+++.++........||+|++
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~ 225 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEF 225 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 998877766531 2399999999888766554444457887765
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=1.7e-22 Score=195.37 Aligned_cols=291 Identities=18% Similarity=0.248 Sum_probs=205.6
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 016882 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (381)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~ 133 (381)
+..++++.+...++....+...|.+.++ +|.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGD-------LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 3455667788888888899999999888 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchh
Q 016882 134 YLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213 (381)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 213 (381)
..++.++++++++++.++++|++.|++.+...+...+++.|++|+++|+++.+++..+..+|..+++.+++.+.++. +|
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w 155 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HW 155 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887 99
Q ss_pred HHHHHhhHHHHHHHHHHH-hhcccchhHHHHhhccccCcchhhHHH--HHHHHHHH--hCCCCCCCChhhHHH-------
Q 016882 214 RYMYGASTPLAVIMGMGM-WWLPASPRWLLLCAMKRKGDMQDLRES--AISCLCRL--RGQSIGDSAPTEVDE------- 281 (381)
Q Consensus 214 ~~~f~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~------- 281 (381)
|+.|++.+++.++..++. ++.|++++. ++++.+.....-. ....+... .+++.+.........
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 156 RWIFLINVPIGIIVVVVAFFILPRDKPA-----ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred eehhhhhhHHHHHHHHHHHHHcCCcccc-----ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 999999888877655444 345654320 0000000000000 00001110 111111111111100
Q ss_pred -----HHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHH
Q 016882 282 -----ILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGL 355 (381)
Q Consensus 282 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 355 (381)
...+. .++++....++++++..+...+..++.. ..+....++.|.++++ .|+ +..++.......++
T Consensus 231 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~g~-s~~~~g~~~~~~~~ 302 (485)
T TIGR00711 231 AIIAFVVWEL---TDDNPLVDLRLFKYRNFTIGCVYMSLLG----LGLYGSFYLLPLYLQQVLGY-TALQAGLHILPVGL 302 (485)
T ss_pred HHHHHHHHHH---cCCCCccCHHHHcCCChHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHH
Confidence 00111 1111222235666665544433333222 2234556778888776 488 77777778777888
Q ss_pred HHHHHhHHHH
Q 016882 356 FKVGSCTLFF 365 (381)
Q Consensus 356 ~~~i~~~~~~ 365 (381)
..+++.++..
T Consensus 303 ~~~~~~~~~g 312 (485)
T TIGR00711 303 APMLSSPIAG 312 (485)
T ss_pred HHHHHHHHHH
Confidence 7877777644
No 35
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=1.5e-22 Score=193.89 Aligned_cols=177 Identities=15% Similarity=0.056 Sum_probs=143.0
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
....+.....+.+....+...|.+.+ .|++..+.+++.+.+.++++++++++|+++||+|||++++++.++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~p~l~~--------~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 32 LGIFFGYAAYYLVRKNFALAMPYLVE--------QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 44444555555565556667777665 3889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc----hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHH-HHHHHHHhhcc
Q 016882 135 LVGALVTALAP----DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG-GYGIGSLLVDL 209 (381)
Q Consensus 135 ~~~~~~~~~~~----~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~ 209 (381)
+++.+++++.+ +++.++++|++.|++.+...+.....+.|++|+++|++++++++.+..+|..+ ++.++..+...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 99988887753 78889999999999999888888888999999999999999999999998754 55444333333
Q ss_pred cchhHHHHHhhHHHHHHH-HHHHhhcccchhH
Q 016882 210 VAGWRYMYGASTPLAVIM-GMGMWWLPASPRW 240 (381)
Q Consensus 210 ~~~w~~~f~i~~~~~~~~-~~~~~~~~~~~~~ 240 (381)
. +||+.|++.+++.++. ++..+++||+|+.
T Consensus 184 ~-gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 184 N-DWHAALYMPAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHHccCCHhh
Confidence 3 9999999988887764 4555667887753
No 36
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=4.8e-22 Score=186.37 Aligned_cols=174 Identities=15% Similarity=0.238 Sum_probs=154.6
Q ss_pred HHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 016882 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (381)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~ 135 (381)
...+..+..++......+.+|.+.++ +|.+..+.+++.+.+.++..+++++.|+++||+|||+++.++.++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~~-------~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 79 (382)
T PRK10091 7 SLALGTFGLGMAEFGIMGVLTELAHD-------VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCV 79 (382)
T ss_pred HHHHHHHHHHhhHHHHHhChHHHHHH-------cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHH
Confidence 34445566667777777788888887 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 016882 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 215 (381)
++.++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++++++.+.+.. +||+
T Consensus 80 ~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~ 158 (382)
T PRK10091 80 IGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRY 158 (382)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHH
Confidence 999999999999999999999999999888888999999999999999999999999999999999999998876 9999
Q ss_pred HHHhhHHHHHHHHH-HHhhcccc
Q 016882 216 MYGASTPLAVIMGM-GMWWLPAS 237 (381)
Q Consensus 216 ~f~i~~~~~~~~~~-~~~~~~~~ 237 (381)
.|++.+++.++..+ ..++.||.
T Consensus 159 ~f~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 159 TFLLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999888776544 33446664
No 37
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.90 E-value=2.6e-23 Score=194.13 Aligned_cols=268 Identities=18% Similarity=0.124 Sum_probs=192.8
Q ss_pred HHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 016882 60 GGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL 139 (381)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~ 139 (381)
+++...++....+...|.+.++ +|.+..+.+++.+++.++..+++++.|+++||+|||+.+.++.++.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 75 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEE-------IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNL 75 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHH-------hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHH
Confidence 3456667777888888888877 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHH-HHHHHhhcccchhHHHHH
Q 016882 140 VTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY-GIGSLLVDLVAGWRYMYG 218 (381)
Q Consensus 140 ~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~w~~~f~ 218 (381)
+++++++++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .++..+.+.. +||+.|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 154 (379)
T TIGR00881 76 FFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-SWHWVFI 154 (379)
T ss_pred HHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-CchhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 4666666665 9999999
Q ss_pred hhHHHHHHHH-HHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccc
Q 016882 219 ASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSL 297 (381)
Q Consensus 219 i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (381)
+.+++.++.. +..++.||+|+....+. +++. ..+ +.++ . + ++.+++.+.++...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~------------~~~~--~----~--~~~~~~~~~~~~~~ 209 (379)
T TIGR00881 155 VPGIIAIIVSLICFLLLRDSPQSCGLPP---AEEM--PNE------------EPDG--D----A--EKKEEELTKKQIFL 209 (379)
T ss_pred HHHHHHHHHHHHHheeeCCCccccccCc---cccC--ccc------------cccc--c----c--ccccccccchHHHH
Confidence 8888776644 44445666654210000 0000 000 0000 0 0 00000011112234
Q ss_pred hhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 298 REVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+++++++..+...+...+. ......+..|.|.++++ .|+ +..++.....+..+..+++.++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g 273 (379)
T TIGR00881 210 QYVLLNKVLWYISLGYVFV----YVVRTGILDWSPLYLTQEKGF-SKEKASWAFTLYELGGLVGTLLAG 273 (379)
T ss_pred HHHHhcchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHcchhHHHHH
Confidence 5556665444333332222 22234556677777654 588 667777777788888887777654
No 38
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=1.7e-22 Score=197.02 Aligned_cols=218 Identities=22% Similarity=0.302 Sum_probs=175.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
++.+.....+..+++.+|..+|++++|.++||+|||++++++.++..++.++.++++|++.+++.|++.|++.++.....
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHh
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccc
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKR 248 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (381)
..++.|++++++|+.+..+ ......++.+++.+++++.+ +||+.+++..+++++.++..++.||+|+|+..++
T Consensus 193 ~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g--- 265 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKG--- 265 (521)
T ss_pred HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcC---
Confidence 9999999999999999999 77777777777777777765 8999999999999988777677779999999887
Q ss_pred cCcchhhHHHHHHHHHHHhCCCCCCCChhh-HHH--HHHhhhhccccccccchhhccccchHHHHHHHHHHHHH
Q 016882 249 KGDMQDLRESAISCLCRLRGQSIGDSAPTE-VDE--ILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQ 319 (381)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (381)
+.+|+++.++++.+.+..+....+ .+. ..+.......+++..+.++++.+.+++..+...+.++.
T Consensus 266 ------~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 333 (521)
T KOG0255|consen 266 ------RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFV 333 (521)
T ss_pred ------chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHH
Confidence 668888888887654422211111 111 11111122223446688899887555555545554443
No 39
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=4.2e-22 Score=186.74 Aligned_cols=247 Identities=15% Similarity=0.131 Sum_probs=187.8
Q ss_pred hhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 016882 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~ 141 (381)
+..........+..|.+.++ +|.+..+.+++.+++.++..+++++.|++.||+|||+.+..+.++.+++.+++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAAD-------LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHhcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 33445556666778888777 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhH
Q 016882 142 ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAST 221 (381)
Q Consensus 142 ~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~ 221 (381)
.++++++.++++|++.|++.+...+...+++.|++|+++|++..++.+....+|..+++.+++.+.+.. +||+.|++.+
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~~~ 166 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAFLS 166 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998876 9999999988
Q ss_pred HHHHHHHHHH-hhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhh
Q 016882 222 PLAVIMGMGM-WWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREV 300 (381)
Q Consensus 222 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (381)
++.++..+.. ++.||+++.. ++ . +. ++....+++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~---------~~-------------------~-----~~-----------~~~~~~~~~~ 202 (385)
T TIGR00710 167 LAGILLSALIFFILPETLPYE---------AR-------------------I-----QI-----------STYFETFLLL 202 (385)
T ss_pred HHHHHHHHHHHHhCCCCCCCc---------cc-------------------C-----CH-----------HHHHHHHHHH
Confidence 8877655444 3456543210 00 0 00 0001123455
Q ss_pred ccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHH-HcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 301 FHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
++++..+...+...+.. ..+.....+.|.+++ +.|+ +..+.........+..+++.++..
T Consensus 203 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~-~~~~~g~~~~~~~~~~~~~~~~~g 263 (385)
T TIGR00710 203 LKSKMFWGYALIYGASF----GGFFAFFSGAPFVYIDIMGV-SPSVFGLLFALNIIAMIFGGFLNG 263 (385)
T ss_pred HcCchhHHHHHHHHHHH----HHHHHHHHcChHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55554444333222221 223445556676665 5688 666677777777777777776644
No 40
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=2.3e-21 Score=182.56 Aligned_cols=170 Identities=17% Similarity=0.196 Sum_probs=150.6
Q ss_pred HHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 016882 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (381)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~ 135 (381)
...++.+..+.+....+..+|.+.++ +|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~g~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 11 ISFLSYALTGALVIVTGMVMGPIAEY-------FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34455667777777888888998887 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 016882 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 215 (381)
++.++++++++++.++++|++.|++.+...+....++.|++|+++|+..+++.+....+|..++|.+.+.+.....+||+
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~ 163 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYW 163 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 99999999999999999999999999988888899999999999999999999999999999999998887754349999
Q ss_pred HHHhhHHHHHHHHHHHh
Q 016882 216 MYGASTPLAVIMGMGMW 232 (381)
Q Consensus 216 ~f~i~~~~~~~~~~~~~ 232 (381)
.|++.+++.++..++.+
T Consensus 164 ~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 164 VYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988887766554443
No 41
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=4e-22 Score=185.93 Aligned_cols=242 Identities=15% Similarity=0.074 Sum_probs=179.0
Q ss_pred ccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchH
Q 016882 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF 147 (381)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~ 147 (381)
....++..|.+.++ +|++..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++++++++
T Consensus 19 ~~~~~~~~~~~~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~ 91 (377)
T TIGR00890 19 VYTWTLLAPPLGRY-------FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSL 91 (377)
T ss_pred HhhhhhHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHH
Confidence 33556678888887 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHH
Q 016882 148 IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (381)
Q Consensus 148 ~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~ 227 (381)
+.++++|++.|++.+...+.....+.+++| ++|+++.++...+..+|..+++++.+.+.+.. +||+.|++.+++.++.
T Consensus 92 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~ 169 (377)
T TIGR00890 92 AALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGIIFLLV 169 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHHHHHHH
Confidence 999999999999999888888888999997 67999999999999999988777777777765 9999999999888776
Q ss_pred HHHHh-hcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccch
Q 016882 228 GMGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCL 306 (381)
Q Consensus 228 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (381)
.+..+ +.+++|+.. . + ++.+ .+.++.+.++.++++..
T Consensus 170 ~~~~~~~~~~~~~~~---~---~-------------------~~~~-----------------~~~~~~~~~~~~~~~~~ 207 (377)
T TIGR00890 170 IVLGAFLIGYPPGQL---I---K-------------------TNIE-----------------VSVKDYTVWEMLRTPQF 207 (377)
T ss_pred HHHHHHheecCchhc---c---c-------------------cCcc-----------------cchhhhhHHHHHcCccH
Confidence 55444 454433210 0 0 0000 00001123455665544
Q ss_pred HHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 307 KALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+...+...+..+ . ......+.+.+.++.|. +..+......+.++..+++.++..
T Consensus 208 ~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g 261 (377)
T TIGR00890 208 WVLYLSFFLNAV---S-GLLLIGLYKPYGQSLGL-SDGFLVLAVSISSIFNGGGRPFLG 261 (377)
T ss_pred HHHHHHHHHHhH---H-HHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443332222221 1 22333444556677787 556667777777777777777644
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.90 E-value=4.3e-22 Score=190.03 Aligned_cols=277 Identities=17% Similarity=0.081 Sum_probs=190.5
Q ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q 016882 52 LPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA 131 (381)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~ 131 (381)
..+....+.+...+..........|.+.+ +|++..+.+++.+++.++..+++++.|+++||+|||+.+.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~ 98 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE--------QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH--------cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHH
Confidence 33344455556666666666666776664 5899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh----chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhh
Q 016882 132 LLYLVGALVTALA----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (381)
Q Consensus 132 ~~~~~~~~~~~~~----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 207 (381)
++.+++.++++.. ++++.+.+.|++.|++.|...+.....+.|++|+++|++++++.+.+..+|..+++.+.+...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~ 178 (438)
T TIGR00712 99 ILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGM 178 (438)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHH
Confidence 9999888877664 467788899999999999888888999999999999999999999999999999998877655
Q ss_pred cccchhHHHHHhhHHHHHHHH-HHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhh
Q 016882 208 DLVAGWRYMYGASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTEL 286 (381)
Q Consensus 208 ~~~~~w~~~f~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (381)
....+||+.|++.++++++.. +..+++||+|+....+. . ++. +.+...+. . ++ .
T Consensus 179 ~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~-------~~~-------~~~~~~~~-~---~~----~ 233 (438)
T TIGR00712 179 AWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP---I-------EEY-------RNDYPDDY-N---EK----A 233 (438)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC---c-------hhc-------cccccccc-c---cc----c
Confidence 433499999999988877754 45556788765310000 0 000 00000000 0 00 0
Q ss_pred hhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHc-CCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 287 SYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+.+.+.++.-.+.+++++..+...+...+. ....+.+..|.|.++++. |+ +...+.....+..+.++++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~l~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g 308 (438)
T TIGR00712 234 EQELTAKEIFMQYVLPNKLLWYIAIANVFV----YLLRYGVLDWSPTYLKEVKHF-ALDKSSWAYFLYEYAGIPGTLLCG 308 (438)
T ss_pred ccccchHHHHHHHHccCchHHHHHHHHHHH----HHHHHHHHHhHHHHHHHccCC-ChhhHHHHHHHHHHHHHHHHHHHH
Confidence 000000000112345555444433322222 223355667888888764 87 666777777788888888777755
Q ss_pred H
Q 016882 366 M 366 (381)
Q Consensus 366 ~ 366 (381)
.
T Consensus 309 ~ 309 (438)
T TIGR00712 309 W 309 (438)
T ss_pred H
Confidence 3
No 43
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.89 E-value=4.1e-21 Score=186.36 Aligned_cols=181 Identities=23% Similarity=0.391 Sum_probs=159.8
Q ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q 016882 52 LPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA 131 (381)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~ 131 (381)
..+..+.++.+..+++.....+..|.+.++ +|++..+.+++.+.+.++..+++++.|+++||+|||+.++++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 92 (496)
T PRK03893 20 KAFSAAWLGYLLDGFDFVLITLVLTEVQGE-------FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISI 92 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 344556667777888888888888888877 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccc
Q 016882 132 LLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA 211 (381)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 211 (381)
++.+++.+++++.++++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+.+.+.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~- 171 (496)
T PRK03893 93 VLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW- 171 (496)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred hhHHHHHhhHHHHHHHHHHHhhcccchhH
Q 016882 212 GWRYMYGASTPLAVIMGMGMWWLPASPRW 240 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~~~~~~~~~~~~~~~ 240 (381)
+||+.|++.++..++.++.....||++++
T Consensus 172 ~w~~~f~~~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 172 GWRALFFIGILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 99999988655544444444456776554
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.89 E-value=1.2e-21 Score=181.98 Aligned_cols=254 Identities=17% Similarity=0.119 Sum_probs=183.3
Q ss_pred hhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 016882 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~ 141 (381)
+...+........+|.+..+ ++.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++..++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 9 LISLIGTAITQVALPLYVLA-------GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 33344444555556666665 68899999999999999999999999999999999999999999988888888
Q ss_pred HHhc-----hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 016882 142 ALAP-----DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (381)
Q Consensus 142 ~~~~-----~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 216 (381)
.+.. +++.++++|++.|++.+...+...+++.|++|+++|++.+++.+.+..+|..+++.+++.+.+.. +||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~~ 160 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GIKWA 160 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHH
Confidence 8877 99999999999999999999999999999999999999999999999999999999999998876 99999
Q ss_pred HHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhcccccccc
Q 016882 217 YGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVS 296 (381)
Q Consensus 217 f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (381)
|++.++..++..+..++.+.++. ++.+. ++ .++ +.. ++....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~----~~----------------~~~---~~~-------~~~~~~ 202 (365)
T TIGR00900 161 IWVDAVGFAISALLIVSVRIPEL--------AASEI----QA----------------LSN---AVL-------RDTREG 202 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccccC--------CCccc----cc----------------cch---hHH-------HHHHhH
Confidence 99888776665544444322110 00000 00 000 000 000123
Q ss_pred chhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 297 LREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
++++++++..+...+...+..+. .......+.|++.++ .|. +..+........++..+++.++..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 268 (365)
T TIGR00900 203 IKFVLKNPLLRTLLLLALLFNLV---FAPAIVALFPYVQSKYLGR-GSTHYGWVLAAFGLGALLGALLLG 268 (365)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHH---HHHHHHHHhHHHHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666554443333322221 112223677888776 577 666677777777777777777644
No 45
>PRK11043 putative transporter; Provisional
Probab=99.89 E-value=2.9e-21 Score=182.36 Aligned_cols=164 Identities=18% Similarity=0.219 Sum_probs=145.9
Q ss_pred ccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc
Q 016882 66 YDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (381)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~ 145 (381)
+......+..|.+.++ +|.+..+.+++.+++.++..++++++|+++||+|||+.+..+.++..++.+++.+++
T Consensus 20 ~~~~~~~p~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 20 LATDMYLPAFKAIQAD-------LQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHhhHHHHHHH-------HCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 3445556667777776 899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHH
Q 016882 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (381)
Q Consensus 146 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~ 225 (381)
+++.+++.|++.|++.+...+....++.|++|+++++...+.......+|..++|.+++.+.+.. +||+.|++.+++.+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~~~~~~~~~~ 171 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GWQAIFATLFAITL 171 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHH
Confidence 99999999999999988888888889999999999999999999899999999999999999887 99999999988887
Q ss_pred HHHHHHhhcccc
Q 016882 226 IMGMGMWWLPAS 237 (381)
Q Consensus 226 ~~~~~~~~~~~~ 237 (381)
+..+..++++++
T Consensus 172 ~~~~~~~~~~~~ 183 (401)
T PRK11043 172 LLILPTLRLKPS 183 (401)
T ss_pred HHHHHHHHcCCC
Confidence 766655555554
No 46
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.89 E-value=4.9e-22 Score=183.79 Aligned_cols=171 Identities=31% Similarity=0.515 Sum_probs=147.4
Q ss_pred HHhhhcccccccccccc-cccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 016882 60 GGLLYGYDIGSTSCATI-SIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA 138 (381)
Q Consensus 60 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~ 138 (381)
+.+...+......+..| .+.++ +|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~ 76 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEE-------LGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGS 76 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCC-------STTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHH
Confidence 33455555566667777 66666 89999999999999999999999999999999999999999999999996
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Q 016882 139 LVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYG 218 (381)
Q Consensus 139 ~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~ 218 (381)
++..++++.+.++++|++.|++.+...+....++.|++|+++|++.+++.+....+|..+++.+++.+.+.. +||+.|+
T Consensus 77 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~~~~ 155 (352)
T PF07690_consen 77 LLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRWAFL 155 (352)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCCHHH
T ss_pred HHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-ccccccc
Confidence 666666888899999999999999999999999999999999999999999999999999999999999776 9999999
Q ss_pred hhHHHHHHHHHH-Hhhcccch
Q 016882 219 ASTPLAVIMGMG-MWWLPASP 238 (381)
Q Consensus 219 i~~~~~~~~~~~-~~~~~~~~ 238 (381)
+.+++.++..++ .+++++++
T Consensus 156 ~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 156 ISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHHHCCC---S
T ss_pred cccchhhhhhhhHhhhhhhcc
Confidence 999998887664 34455443
No 47
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.89 E-value=3.1e-21 Score=182.39 Aligned_cols=183 Identities=18% Similarity=0.212 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHH
Q 016882 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (381)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l 127 (381)
++.++..+.+.+..+...+....+.+..+.+.++ +|.+..+.++..+.+.++..+++++.|+++||+|||+++
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l 81 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVED-------FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM 81 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 4455556777777777777888888888888777 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhh
Q 016882 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (381)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 207 (381)
.++..+..++.+++.++++++.+++.|++.|++.+...+....++.|++|+++|++..++......+|..++|.+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 161 (406)
T PRK15402 82 LAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI 161 (406)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888999999999999999999998888899999999999998
Q ss_pred cccchhHHHHHhhHHHHHHHHHHH-hhcccch
Q 016882 208 DLVAGWRYMYGASTPLAVIMGMGM-WWLPASP 238 (381)
Q Consensus 208 ~~~~~w~~~f~i~~~~~~~~~~~~-~~~~~~~ 238 (381)
+.. +||+.|++.+++.++..+.. +..||++
T Consensus 162 ~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 162 HVL-PWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred Hcc-CccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 876 99999999888877755543 3456653
No 48
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.89 E-value=1.1e-20 Score=177.57 Aligned_cols=161 Identities=16% Similarity=0.180 Sum_probs=132.8
Q ss_pred ccccccccccccccC-CCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh
Q 016882 66 YDIGSTSCATISIES-PTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA 144 (381)
Q Consensus 66 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~ 144 (381)
..-...++..+.+.+ + +|+|.+|.+++.+++.+++.++.++.|++.||+|+|+++.++.++..+.++..+++
T Consensus 48 ~~w~~~~~l~~~~~~~~-------~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a 120 (462)
T PRK15034 48 CVWMLFSAVTVNLNKIG-------FNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIA 120 (462)
T ss_pred HHHHHHHHHHHHhhhhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666654 4 89999999999999999999999999999999999999999999999999999887
Q ss_pred -----chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhh-----cc-----
Q 016882 145 -----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV-----DL----- 209 (381)
Q Consensus 145 -----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----~~----- 209 (381)
++++.+++.|++.|++ |..++.....+++++|+++||+++|+.....++|..+++++...+. ..
T Consensus 121 ~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~ 199 (462)
T PRK15034 121 VQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNG 199 (462)
T ss_pred HcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999998 6688999999999999999999999997777777766666554433 11
Q ss_pred -------cchhHHHHHhhHHHHHHHHHHHhhc
Q 016882 210 -------VAGWRYMYGASTPLAVIMGMGMWWL 234 (381)
Q Consensus 210 -------~~~w~~~f~i~~~~~~~~~~~~~~~ 234 (381)
..+||.++++..++.++..++.++.
T Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 200 VPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1258888888888877766555543
No 49
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=3.4e-21 Score=168.99 Aligned_cols=194 Identities=22% Similarity=0.323 Sum_probs=169.5
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
.....+.....+.....+...|..... .|++..+..++....+.+..+++..+|.++|++|||+.+.+.....
T Consensus 81 ~~ag~gwmad~m~~m~~s~i~~~l~~~-------w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 81 FVAGMGWMADAMEMMLLSLILPALDEV-------WGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhh-------hchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 444455555555555555555655554 5899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 016882 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 214 (381)
++...+...++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.++...+...+.... |||
T Consensus 154 ~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~-gwr 230 (528)
T KOG0253|consen 154 GVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF-GWR 230 (528)
T ss_pred HHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh-hHH
Confidence 99999999999999999999999999998 788888889999999999888777 999999999999999999888 999
Q ss_pred HHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHh
Q 016882 215 YMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLR 267 (381)
Q Consensus 215 ~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (381)
|......++..+.+..++++||+||++..++ ++++|.+.++++.
T Consensus 231 ~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G---------~~~kAletL~kiA 274 (528)
T KOG0253|consen 231 YLLFTSSTPLMFAARFLVWVYESPRFYLAKG---------DDYKALETLHKIA 274 (528)
T ss_pred HHHHHHHhHHHHHHHHHhhcccCcchhhhcC---------ChHHHHHHHHHHH
Confidence 9999888888888899999999999999988 7788888888874
No 50
>PRK10133 L-fucose transporter; Provisional
Probab=99.88 E-value=1.3e-20 Score=179.29 Aligned_cols=146 Identities=21% Similarity=0.291 Sum_probs=131.6
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
....+..+..++.........|.+.++ +|++..+.+++.+.+.+++.+++++.|++.||+|||+++..+.+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i~~~-------~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQFQQA-------FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 444555677788888888899999777 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH---HHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhh
Q 016882 135 LVGALVT---ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (381)
Q Consensus 135 ~~~~~~~---~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 207 (381)
.++.+++ ..+++++.++++|++.|+|.|...+..+.++.|+.|+++|...+++.+..+.+|..+++.+++.+.
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875 457899999999999999999999999999999988888777899999999999999999987654
No 51
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.88 E-value=7.2e-21 Score=175.69 Aligned_cols=166 Identities=19% Similarity=0.191 Sum_probs=146.3
Q ss_pred cccccccccccccCCCCCCCccccCChhH-HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc
Q 016882 67 DIGSTSCATISIESPTLSGISWYDLSSVE-IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (381)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~ 145 (381)
.+...+.+.|.+.++ +|+|.++ .|.+.++++.+++++.+++|+++||+|.|+++.++.+.+++..++.++++
T Consensus 41 ~R~n~s~a~p~L~~e-------lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~ 113 (511)
T TIGR00806 41 FRPGESFITPYLLTV-------LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT 113 (511)
T ss_pred hhchHHHHHHHHHHH-------cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 456677778888777 8999999 99999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH---hhHH
Q 016882 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYG---ASTP 222 (381)
Q Consensus 146 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~---i~~~ 222 (381)
++..+.+.|++.|++.|... ....++..|+|+++|+++.++...+..+|.++++++++++. .. |||+.+- +...
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~-gWr~y~~Ln~Isl~ 190 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TL-GWISYSTLNIISLV 190 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-CchhHHHHHHHHHH
Confidence 99999999999999999999 99999999999999999999999999999999999999944 44 8987654 4444
Q ss_pred HHHHHHHHHhhcccchhHHH
Q 016882 223 LAVIMGMGMWWLPASPRWLL 242 (381)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~ 242 (381)
..++.++..+++|..++.+.
T Consensus 191 s~~~a~~~a~~LP~~~~sl~ 210 (511)
T TIGR00806 191 FMTFSVFLALFLKRPKRSLF 210 (511)
T ss_pred HHHHHHHHHHhCCCCchhhh
Confidence 44456677778886655443
No 52
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.88 E-value=9.4e-21 Score=181.43 Aligned_cols=159 Identities=14% Similarity=0.131 Sum_probs=139.1
Q ss_pred cccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhch
Q 016882 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146 (381)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~ 146 (381)
.....+...+.+.++ +|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++
T Consensus 34 ~~~~~~~~~~~i~~~-------~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 106 (455)
T TIGR00892 34 FPKAVTVFFKELQQI-------FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSN 106 (455)
T ss_pred hhcchhhhHHHHHHH-------hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhh
Confidence 345566677888777 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHH
Q 016882 147 FIIMVV-GRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (381)
Q Consensus 147 ~~~~~~-~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~ 225 (381)
++.+++ .|++.|++.+...+....++.++++ ++|+++.++.+.+..+|..+++++++.+.+.. |||+.|++.+++.+
T Consensus 107 ~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~ 184 (455)
T TIGR00892 107 VIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLL 184 (455)
T ss_pred HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 988875 5689999998776777788899996 78999999999999999999999999998877 99999999999887
Q ss_pred HHHHHHhhc
Q 016882 226 IMGMGMWWL 234 (381)
Q Consensus 226 ~~~~~~~~~ 234 (381)
+..+..++.
T Consensus 185 ~~~v~~~~~ 193 (455)
T TIGR00892 185 HCCVCGALM 193 (455)
T ss_pred HHHHHHHHh
Confidence 665544443
No 53
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.88 E-value=3.3e-22 Score=197.37 Aligned_cols=278 Identities=16% Similarity=0.186 Sum_probs=193.4
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
+..++..+...+..+..+..+++++++ |+++..+.|++.+.+.+++.++.++.+++.||+|||+++.++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~-------F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~ 108 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERR-------FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIM 108 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhh-------hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHH
Confidence 334445566666778888889999888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc---------------------------------------------------hHHHHHHHHHHHHHHHhh
Q 016882 135 LVGALVTALAP---------------------------------------------------DFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 135 ~~~~~~~~~~~---------------------------------------------------~~~~~~~~r~l~G~~~g~ 163 (381)
+++++++++.+ .+..++++|++.|+|.+.
T Consensus 109 ~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~ 188 (633)
T TIGR00805 109 GLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATP 188 (633)
T ss_pred HHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCc
Confidence 99999987753 245678999999999999
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc---------------------chhHHHHHhhHH
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV---------------------AGWRYMYGASTP 222 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------------~~w~~~f~i~~~ 222 (381)
.++...+++.|++|+++|+..+++++....+|.++|+++++.+.+.+ +.|+..|++.++
T Consensus 189 ~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~ 268 (633)
T TIGR00805 189 IFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGG 268 (633)
T ss_pred chhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987532 237888999888
Q ss_pred HHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhcc
Q 016882 223 LAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFH 302 (381)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (381)
+.++..+.++++|++.+.... +.+. +.++.++ . + ...++ ...+. ....++....++.+++
T Consensus 269 l~~l~~v~l~~~p~~lp~~~~-----~~~~--~~~~~~~-~---~-~~~~~----~~~~~----~~~~~~~~~~~~~Ll~ 328 (633)
T TIGR00805 269 VALLTSIPFFFFPKALPKEGK-----RVNV--DVHETEK-L---E-KSEDK----SRKKN----SDITKDFPKIIKRLLC 328 (633)
T ss_pred HHHHHHHHHHhCccccCCccc-----ccch--hhhhhhc-c---c-ccccc----cchhh----hhhHHHHHHHHHHHHc
Confidence 888766666666654221000 0000 0000000 0 0 00000 00000 0000111234566777
Q ss_pred ccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHH-HHHHHhHHH
Q 016882 303 GKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGL-FKVGSCTLF 364 (381)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~i~~~~~ 364 (381)
++.+....+ ..+.....+..+..|.|.++++ .|+ +...+.....+..+ ..+++.+++
T Consensus 329 n~~f~~~~l----~~~~~~~~~~~~~~~lP~yl~~~~g~-s~~~ag~l~~~~~i~~~~vG~~l~ 387 (633)
T TIGR00805 329 NPIYMLVIL----AQVIDSLAFNGYITFLPKYLENQYGI-SSAEANFLIGVVNLPAAGLGYLIG 387 (633)
T ss_pred CcHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHcCC-cHHHHHHHhhhhhhhHHHHHHhhh
Confidence 764433333 3333344456777889988886 588 55666555555444 345555554
No 54
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=1.6e-20 Score=176.77 Aligned_cols=165 Identities=18% Similarity=0.246 Sum_probs=145.3
Q ss_pred ccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc
Q 016882 66 YDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP 145 (381)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~ 145 (381)
+......+..|.+.++ +|.++.+.+++.+++.++..++++++|+++||+|||+.+.++.++..++.+++.+.+
T Consensus 22 ~~~~~~~p~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 94 (394)
T PRK11652 22 MAQTIYVPAIADMARD-------LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH 94 (394)
T ss_pred HHHHHHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 3444555667777776 899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHH
Q 016882 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (381)
Q Consensus 146 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~ 225 (381)
+++.+++.|++.|++.+...+....+..|.+++++|+.+.++.+.+..++..++|.+++.+.+.. +||+.|++.+++.+
T Consensus 95 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~f~~~~~~~~ 173 (394)
T PRK11652 95 SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRACYLFLLLLGA 173 (394)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHH
Confidence 99999999999999998888888889999999999999999999999999999999999998876 99999999888776
Q ss_pred HHH-HHHhhcccch
Q 016882 226 IMG-MGMWWLPASP 238 (381)
Q Consensus 226 ~~~-~~~~~~~~~~ 238 (381)
+.. +..++.||++
T Consensus 174 ~~~~~~~~~~~~~~ 187 (394)
T PRK11652 174 GVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHhCCccC
Confidence 544 3445567653
No 55
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.87 E-value=1.1e-20 Score=175.97 Aligned_cols=258 Identities=15% Similarity=0.112 Sum_probs=175.3
Q ss_pred Hhhhccccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 016882 61 GLLYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL 139 (381)
Q Consensus 61 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~ 139 (381)
.+..........+..|. +.++ +|++..+.+++.+++.+++.+++++.|+++||+|||+.+.++.++..++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 10 FFLSFSVWFAFSPLAVQMIKDD-------LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHhHHhhhHHHHHH-------hCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 34444455566777785 6666 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhc-hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc---------
Q 016882 140 VTALAP-DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL--------- 209 (381)
Q Consensus 140 ~~~~~~-~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------- 209 (381)
++++++ +++.+++.|++.|++.+. .+....++.|++|+++|+++.++......+|..+++.+++.+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999 999999999999998664 566788999999999999999999987788887777777665531
Q ss_pred cchhHHHH-HhhHHHHHHH-HHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhh
Q 016882 210 VAGWRYMY-GASTPLAVIM-GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELS 287 (381)
Q Consensus 210 ~~~w~~~f-~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (381)
..+||+.| ++.+++..+. ++...+.+|+|+.. . ++.+. +..+... ..
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~-----~~~~~~~--~~---------- 210 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK---P-----------ATGKL-----SFKGARW--SV---------- 210 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCCccc---c-----------cchhc-----ccccccc--cc----------
Confidence 23899999 4445554443 33444456655310 0 00000 0000000 00
Q ss_pred hccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHHHHHHHhHHH
Q 016882 288 YVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKVGSCTLF 364 (381)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~ 364 (381)
++......++.++++..+...+...+. ......+..+.|.++++ .|+ +..++.....+..+..+++.+++
T Consensus 211 --~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~ 281 (366)
T TIGR00886 211 --GTGALGDQLKVFRDRHTWILALLYSVT----FGSFLGVSSIFAMFFKDQFGL-SKVTAGAYASLGGLLGSLARPLG 281 (366)
T ss_pred --cchhHHHHHHHHhccchhhHHHHHHHH----HHHHHHHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHhhcc
Confidence 000001234455555444333322222 22234556677777765 588 66677777777777777777654
No 56
>PRK10504 putative transporter; Provisional
Probab=99.87 E-value=1.3e-19 Score=174.67 Aligned_cols=172 Identities=17% Similarity=0.297 Sum_probs=153.2
Q ss_pred HHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 016882 57 PALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLV 136 (381)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~ 136 (381)
++++.++..++.....+..|.+.++ +|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTALPSMAQS-------LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 3445566777777778889998887 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 016882 137 GALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (381)
Q Consensus 137 ~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 216 (381)
+.+++.++++++.++++|++.|++.+...+...+++.|++|+++|+++.++......+|..++|.+++.+.+.. +||+.
T Consensus 88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~~ 166 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHWI 166 (471)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHHH
Confidence 99998999999999999999999999999999999999999999999999999999999999999999999887 99999
Q ss_pred HHhhHHHHHHHHHHHhh-ccc
Q 016882 217 YGASTPLAVIMGMGMWW-LPA 236 (381)
Q Consensus 217 f~i~~~~~~~~~~~~~~-~~~ 236 (381)
|++...+.++..+.... .|+
T Consensus 167 f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 167 FLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 99988777665544433 444
No 57
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.87 E-value=7.9e-20 Score=172.48 Aligned_cols=172 Identities=19% Similarity=0.268 Sum_probs=150.8
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
..++...+..++.....++..|.++++ +|++..+.+++.+.+.+++.+++++.|++.||+|||+++.++.++.
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~-------~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~ 78 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQA-------FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 455666678888888888999999887 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH---hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc--
Q 016882 135 LVGALVTAL---APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL-- 209 (381)
Q Consensus 135 ~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-- 209 (381)
+++.+++.. .++++.+++.|++.|+|.|...+..+.++.+..|+++|++.+++.+...++|..+++.+++.+...
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~ 158 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNL 158 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999888644 358999999999999999999999999999999999999999999999999999999999887532
Q ss_pred -----------------------cchhHHHHHhhHHHHHHHHHHHhh
Q 016882 210 -----------------------VAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 210 -----------------------~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
..+||++|++.+++.++..+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~ 205 (410)
T TIGR00885 159 PHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIML 205 (410)
T ss_pred ccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 126999999888877765444433
No 58
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.87 E-value=7.2e-20 Score=171.59 Aligned_cols=148 Identities=24% Similarity=0.286 Sum_probs=135.8
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
..+..+.+..........+..|.+.++ +|.|..+.|++.+.+.++..+++++.|+++||+|||+.+..+.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~lp~~~~~-------~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~ 81 (381)
T PRK03633 9 LLLLCGLLLLTLAIAVLNTLVPLWLAQ-------EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 334455567778888888999999887 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
+++.++++++++++.++++|++.|++.+...+.....+.+..++++|++++++++.+..+|..+|+.+++.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 82 AAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999988888888888999999999999999999999999999999998765
No 59
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.86 E-value=1.2e-19 Score=168.54 Aligned_cols=236 Identities=19% Similarity=0.195 Sum_probs=177.5
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHH
Q 016882 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148 (381)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~ 148 (381)
...++.+|.+.++ +|++..+.+++.+++.++..+++++.|+++||+|||+++.++.++..++.+.+ ..++++
T Consensus 17 ~~~~~~lp~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSA-------LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTA 88 (355)
T ss_pred ccCcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHH
Confidence 4567788888887 89999999999999999999999999999999999999999998888887777 778899
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccc-hhHHHHHhhHHHHHHH
Q 016882 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-GWRYMYGASTPLAVIM 227 (381)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~w~~~f~i~~~~~~~~ 227 (381)
.+++.|++.|++.+...+....++.|++| ++|++++++.+.+..+|..+++.+.+.+.+..+ +||+.|.+.+++.++.
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999888888889999997 689999999999999999999999998887643 4999988777654433
Q ss_pred HHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchH
Q 016882 228 GMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK 307 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (381)
.+ .++|+.++. . +.+ ++.++...+++++++..+
T Consensus 168 ~~--~~~~~~~~~----~------------------------~~~-----------------~~~~~~~~~~~~~~~~~~ 200 (355)
T TIGR00896 168 LL--AWIPQVRRR----V------------------------AAN-----------------QTTTRLTPVRIWRSPLAW 200 (355)
T ss_pred HH--HHhhhhccc----c------------------------CCC-----------------CCCCCCCCchhhcCHhHH
Confidence 22 233432110 0 000 000112344566665443
Q ss_pred HHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 308 ALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
...+.. +.....+.....|.|.++++.|+ +.........+..+..+++.++.-
T Consensus 201 ~~~~~~----~~~~~~~~~~~~~lp~~~~~~g~-~~~~~g~~~~~~~~~~i~~~~~~g 253 (355)
T TIGR00896 201 QVTVFF----GLQSGLYYSLIGWLPAILISHGA-SAATAGSLLALMQLAQAASALLIP 253 (355)
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHHHHhHH
Confidence 332222 22222345566788989888888 667777888888888888887744
No 60
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.86 E-value=6.9e-20 Score=172.40 Aligned_cols=160 Identities=21% Similarity=0.287 Sum_probs=143.8
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHH
Q 016882 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (381)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~ 149 (381)
...+.+|.+.++ +|.+..+.++..+.+.++..+++++.|+++||+|||+.+.++.++..++.+++..+++++.
T Consensus 21 ~~~~~lp~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~ 93 (392)
T PRK10473 21 MYLVGLPRIAAD-------LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSL 93 (392)
T ss_pred HHhhhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 344668888777 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH
Q 016882 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
++++|++.|++.+...+....++.|++|+++|+++.++.+....+|..++|.+++.+.+.. +||+.|++.+++.++..+
T Consensus 94 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~~~~~i~~~ 172 (392)
T PRK10473 94 FLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMAAMGILVLL 172 (392)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHHHHHHHHHH
Confidence 9999999999999989999999999999999999999999999999999999999888776 999999999888776544
Q ss_pred H-Hhhcccc
Q 016882 230 G-MWWLPAS 237 (381)
Q Consensus 230 ~-~~~~~~~ 237 (381)
. .++.||+
T Consensus 173 ~~~~~~~~~ 181 (392)
T PRK10473 173 LSLFILKET 181 (392)
T ss_pred HHHHHcCCC
Confidence 4 4456665
No 61
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.86 E-value=4.8e-20 Score=172.51 Aligned_cols=162 Identities=17% Similarity=0.282 Sum_probs=145.9
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHH
Q 016882 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148 (381)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~ 148 (381)
....+..|.+.++ +|++..+.+++.+++.++..++.+++|+++||+|||+.+..+.++.+++.+++.+.++++
T Consensus 8 ~~~~p~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 80 (377)
T PRK11102 8 DMYLPALPVIAAD-------FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTID 80 (377)
T ss_pred HHHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence 3445667777776 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHH
Q 016882 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (381)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~ 228 (381)
.++++|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+.. +||+.|++.+++.++..
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~ 159 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALAAILAA 159 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998876 99999999888877654
Q ss_pred H-HHhhcccch
Q 016882 229 M-GMWWLPASP 238 (381)
Q Consensus 229 ~-~~~~~~~~~ 238 (381)
+ ..++.||++
T Consensus 160 ~~~~~~~~~~~ 170 (377)
T PRK11102 160 ALVFFFIPETL 170 (377)
T ss_pred HHHHHhCCccC
Confidence 4 444566653
No 62
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.86 E-value=1.3e-19 Score=170.45 Aligned_cols=145 Identities=14% Similarity=0.089 Sum_probs=128.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|.+..+.+++.+.+.+++.+.++++|+++||+|||++++++.++.+++.+++.+..+. ++.|+++|++.+...|..
T Consensus 33 ~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~ 109 (393)
T PRK11195 33 LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAK 109 (393)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999888887776664 778999999999999999
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccch
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 238 (381)
.+++.|++|+++|++++++.+....+|..+||.+++.+.+. .|+..+.+.+...++..+..+.+||+|
T Consensus 110 ~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 110 YGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999999999999999999875 488777777666555555556677764
No 63
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.86 E-value=5.8e-20 Score=173.34 Aligned_cols=160 Identities=20% Similarity=0.224 Sum_probs=135.4
Q ss_pred Hhhhccccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 016882 61 GLLYGYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL 139 (381)
Q Consensus 61 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~ 139 (381)
.+...+......+.+|. +.++ +|.+..+.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+
T Consensus 24 ~~~~~~~~~~~~~~l~~~i~~~-------~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (399)
T PRK05122 24 TFISYLTIGLPLAVLPGYVHDQ-------LGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGL 96 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-------cCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHH
Confidence 34444455556666765 3454 799999999999999999999999999999999999999999998887766
Q ss_pred HHHHh--------chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccc
Q 016882 140 VTALA--------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA 211 (381)
Q Consensus 140 ~~~~~--------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 211 (381)
.+.++ .+++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+++.+.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~- 175 (399)
T PRK05122 97 LYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG- 175 (399)
T ss_pred HHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc-
Confidence 65543 256788999999999999999999999999999999999999999999999999999999998887
Q ss_pred hhHHHHHhhHHHHHHHH
Q 016882 212 GWRYMYGASTPLAVIMG 228 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~~~ 228 (381)
+|++.+++.+++.++..
T Consensus 176 g~~~~~~~~~~~~~~~~ 192 (399)
T PRK05122 176 GLAGLGLLIMLLALLGL 192 (399)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 99999887766654433
No 64
>PRK12382 putative transporter; Provisional
Probab=99.85 E-value=3.3e-19 Score=167.79 Aligned_cols=151 Identities=17% Similarity=0.250 Sum_probs=127.8
Q ss_pred ccccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH--
Q 016882 67 DIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-- 143 (381)
Q Consensus 67 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~-- 143 (381)
......+.+|. +.++ +|.|..+.+++.+++.++..++++++|+++||+|||+.+..+.++..++.+.+..
T Consensus 30 ~~~~~~p~l~~~l~~~-------lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~ 102 (392)
T PRK12382 30 TVGLPLPVIPLFVHHD-------LGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAA 102 (392)
T ss_pred HHHHHhhhhhHHHHHh-------cCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhh
Confidence 44455556665 3455 8999999999999999999999999999999999999999988877765543321
Q ss_pred ------hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 016882 144 ------APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (381)
Q Consensus 144 ------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 217 (381)
.++++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..++|++++.+.+.. |||+.+
T Consensus 103 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~ 181 (392)
T PRK12382 103 ILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF-GFAALA 181 (392)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHH
Confidence 3578999999999999999888888899999999999999999999999999999999999998876 999877
Q ss_pred HhhHHHHH
Q 016882 218 GASTPLAV 225 (381)
Q Consensus 218 ~i~~~~~~ 225 (381)
++..+..+
T Consensus 182 ~~~~~~~~ 189 (392)
T PRK12382 182 LTTMVLPL 189 (392)
T ss_pred HHHHHHHH
Confidence 76555433
No 65
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.85 E-value=3e-20 Score=167.86 Aligned_cols=283 Identities=16% Similarity=0.208 Sum_probs=196.3
Q ss_pred hHHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCcc-ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH
Q 016882 47 VSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISW-YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR 125 (381)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~ 125 (381)
.|+....+.++..+.+.++|+...++...+.+........+. =+.++.-.+.+..+.++|.++|++++|+++||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 334445558888899999999999998887766542221110 1366778899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc-------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHH
Q 016882 126 ELILAALLYLVGALVTALAP-------DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG 198 (381)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 198 (381)
++...+++++++++++++.. -.+++...|+++|+|.|+.+|...+..+|....++||...+.+....++|...
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 99999999999999777642 25788899999999999999999999999999999999999987777777777
Q ss_pred HHHHHHHhhc----c----------cchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHH
Q 016882 199 GYGIGSLLVD----L----------VAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLC 264 (381)
Q Consensus 199 ~~~~~~~l~~----~----------~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (381)
|..++..+.. . ..-||..|.+.+++.+.++...+.+||++++-.... ++.++..+
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~-----------~~~~~a~~ 264 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVS-----------KKLKQAAG 264 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhh-----------cCHhhhhh
Confidence 7766655541 1 125999999999999999888889999998853322 11111111
Q ss_pred HHhCCCCCCCChhhHHHHHHhhhhccccccccch---hhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCC
Q 016882 265 RLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLR---EVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFS 341 (381)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 341 (381)
+..+.. ..+.+++.+. +...+.++.+++ ..+..++. +.++.....+|..=..++..+.+...+++..|+
T Consensus 265 d~~k~~-----~~~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg-~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~- 336 (538)
T KOG0252|consen 265 DMKKVL-----SVDIEAESTA-ESDVPPPSNSFGLFSRLFLRWHG-KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGV- 336 (538)
T ss_pred cccccc-----ccccchhhcc-ccCCCCcccccchHHHHHHHHHH-HHHHHHHHHHHhhhhhhhccccHHHHHHHhhcc-
Confidence 111100 0011111111 111111222222 22222222 445556666666656678888999999998887
Q ss_pred CCchhHH
Q 016882 342 AASDATR 348 (381)
Q Consensus 342 ~~~~~~~ 348 (381)
...+...
T Consensus 337 ~~~~~~~ 343 (538)
T KOG0252|consen 337 IPSANTY 343 (538)
T ss_pred CCCcchH
Confidence 4343333
No 66
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.84 E-value=2.9e-19 Score=168.72 Aligned_cols=230 Identities=12% Similarity=0.065 Sum_probs=162.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH---H-hchHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---L-APDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~r~l~G~~~g~~ 164 (381)
+|.+..+.+++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+++. . .++++.+++.|++.|++.+..
T Consensus 43 ~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~ 122 (402)
T TIGR00897 43 LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLF 122 (402)
T ss_pred hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHH
Confidence 799999999999999999999999999999999999999999999988876553 3 257888899999999998888
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHHHHHHHH-HHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHH-hhcccchhHHH
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGM-VGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM-WWLPASPRWLL 242 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~-~~~~~~~~~~~ 242 (381)
.+.....+.+++|+++|++++|+.+.+.++|. .+++.+++.+.+.. ||+..++......++..+.. ++.++.++.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (402)
T TIGR00897 123 AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF-GEMNTLWSALAFVLTGGVIALFSNKDIFTP-- 199 (402)
T ss_pred HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-chHHHHHHHHHHHHHHHHHHHhccCCCCCc--
Confidence 77778888999999999999999999999997 68999998888776 76666554444333332222 333432110
Q ss_pred HhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhh
Q 016882 243 LCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQIT 322 (381)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (381)
+ + ++ ++ ++. ++.+..++++++++..+...+ . .+.+..
T Consensus 200 ------~-~-----~~-------------~~---~~~-----------~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~ 236 (402)
T TIGR00897 200 ------Q-H-----MQ-------------TR---EKF-----------SELGKAATILFTNPNVLLGGM---V-RIINTI 236 (402)
T ss_pred ------c-c-----cc-------------CC---cch-----------hhHHHHHHHHHcChhHHHHHH---H-HHHHHH
Confidence 0 0 00 00 000 000112345666654433222 2 222333
Q ss_pred chhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 323 GQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 323 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+......|.|.++++.|+ +..+.........+..+++.++..
T Consensus 237 ~~~~~~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g 278 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGF-STSEWLQIWGTFFFTNIVFNVIFG 278 (402)
T ss_pred HHHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHH
Confidence 456677888999998898 656666666667777777777644
No 67
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.84 E-value=5.2e-19 Score=165.25 Aligned_cols=171 Identities=22% Similarity=0.201 Sum_probs=139.4
Q ss_pred Hhhhcccccccccccccc-cCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHH
Q 016882 61 GLLYGYDIGSTSCATISI-ESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL-AALLYLVGA 138 (381)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~-~~~~~~~~~ 138 (381)
++..++......+.+|.+ .++ +|.+..+.+++.+++.++..+.+++.|+++||+|||+.+++ +..+..++.
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~ 78 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEE-------VRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALAC 78 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 345555556666666654 455 89999999999999999999999999999999999887654 566666777
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhH--HhHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 016882 139 LVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQL--ISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (381)
Q Consensus 139 ~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 216 (381)
++++++++++.+++.|++.|.+.+...+....+..|+.|++.|+.. .+....+.++|.++++.+++.+.+.. +||+.
T Consensus 79 ~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~ 157 (375)
T TIGR00899 79 LLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTVM 157 (375)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHHH
Confidence 8888899999999999999888787888888889999888777754 57788888999999999999998877 99999
Q ss_pred HHhhHHHHHHHHHHH-hhcccchh
Q 016882 217 YGASTPLAVIMGMGM-WWLPASPR 239 (381)
Q Consensus 217 f~i~~~~~~~~~~~~-~~~~~~~~ 239 (381)
|++.+++.++..+.. +++||.|+
T Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 158 FLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc
Confidence 999998877665544 44787653
No 68
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.84 E-value=4.3e-19 Score=166.53 Aligned_cols=229 Identities=24% Similarity=0.310 Sum_probs=159.6
Q ss_pred CChhHHHHHHHH-----HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHH--------HHHHHHHHH
Q 016882 91 LSSVEIGLITSG-----SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI--------IMVVGRFVF 157 (381)
Q Consensus 91 ~~~~~~~~~~~~-----~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~ 157 (381)
.++.+.+.+.+. ..++..+++++.|+++||+|||+++.++.++..++.++++++++++ .++++|++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 344555554443 3334457899999999999999999999999999999999988865 478899999
Q ss_pred HHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc-------ccchhHHHHHhhHHHHHHHHHH
Q 016882 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD-------LVAGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 158 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~w~~~f~i~~~~~~~~~~~ 230 (381)
|++.+...+....++.|++|+++|++..++.+.+..+|.++++.++..+.. ...+||+.|++.+++.++..+.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988776542 1238999999888777666555
Q ss_pred HhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchHHHH
Q 016882 231 MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALI 310 (381)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (381)
....||+|++...++ ++++.+.+.++.++++. ++..
T Consensus 187 ~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~-~~~~ 222 (394)
T TIGR00883 187 RRNLEETPVFEKAQE-------------------------------------------KHKKKRGPIRETLTKHR-KPFL 222 (394)
T ss_pred HHhcCCChhHHHHHh-------------------------------------------ccccccCCHHHHHHhch-HHHH
Confidence 555676654211000 00111223444555432 1223
Q ss_pred HHHHHHHHHHhhchhHHHhcHHHHH-HHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 311 IGAGLVLFQQITGQPSVLYYAASIL-QSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
...... +...........+.|.++ ++.|. +.........+..+..+++.+++.
T Consensus 223 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g 276 (394)
T TIGR00883 223 LGLGLV-IATTTTFYLITTYLPTYLTQTLGL-SANSALLVLMLSLILFFITIPLSG 276 (394)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHH
Confidence 322222 223333455667778887 45687 656666666677777777666543
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.83 E-value=8.6e-19 Score=161.69 Aligned_cols=168 Identities=35% Similarity=0.523 Sum_probs=152.1
Q ss_pred HHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 016882 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (381)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~ 137 (381)
....+...+......+..+.+.++ +|.+..+.+++.+...++..+++++.|+++||+|||+.+.++.++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~ 77 (352)
T cd06174 5 FLGFFLSGLDRGLLSPALPLLAED-------LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALG 77 (352)
T ss_pred HHHHHHHHHhhhhhHhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHH
Confidence 344456666777777778888776 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 016882 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (381)
Q Consensus 138 ~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 217 (381)
.++..+.++++.++++|++.|++.+...+...+++.|++|+++|++.+++.+....+|..+++.+++.+.+.. +||+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~ 156 (352)
T cd06174 78 SLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-GWRWLF 156 (352)
T ss_pred HHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999886 899999
Q ss_pred HhhHHHHHHHHHHHhh
Q 016882 218 GASTPLAVIMGMGMWW 233 (381)
Q Consensus 218 ~i~~~~~~~~~~~~~~ 233 (381)
++.+++.++..+...+
T Consensus 157 ~~~~~~~~~~~~~~~~ 172 (352)
T cd06174 157 LILAILGLLLALLLLF 172 (352)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998887776655544
No 70
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.9e-19 Score=172.11 Aligned_cols=281 Identities=16% Similarity=0.087 Sum_probs=197.0
Q ss_pred cccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHH
Q 016882 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIM 150 (381)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~ 150 (381)
.+...+.+.++ ++.+.++.+|+.++......+.+++.+.+.||+|.|++.++|.++..++.++.++++++|.+
T Consensus 65 ~Gv~~~~~~~~-------f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l 137 (509)
T KOG2504|consen 65 FGLLFEELMDY-------FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQL 137 (509)
T ss_pred ehhhHHHHHHH-------hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 33566777776 88899999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHH-HHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH
Q 016882 151 VVGR-FVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 151 ~~~r-~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
++.. ++.|+|.|..+....+.+..+|+ |+|+.+.|+...+.++|.++-|.+...+.+.+ |||+.+++.+.+.+-+++
T Consensus 138 ~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~-G~r~~~l~~~~~~l~~~~ 215 (509)
T KOG2504|consen 138 YLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKY-GWRGALLIFGGISLNVLV 215 (509)
T ss_pred HHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHH
Confidence 8866 77899999999999999998886 88999999999999999999999999999998 999999999888876655
Q ss_pred HHhhc-ccchhHHHHhhccccCcchhhHHHHHHHHHHHhCC-C-CCCC-ChhhHHHHHHhhhhccc--cccccc----hh
Q 016882 230 GMWWL-PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQ-S-IGDS-APTEVDEILTELSYVGE--DKEVSL----RE 299 (381)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~--~~~~~~----~~ 299 (381)
..... |.++..... +.++.++.....+......++.... + ...+ ...+.++.++. +++.. ..+... .+
T Consensus 216 ~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~ 293 (509)
T KOG2504|consen 216 AGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRG-PDKWRNSPLQAFLSMLDLS 293 (509)
T ss_pred HHHHcCCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhC-CccccccchhhhhhhhhHH
Confidence 55543 322221000 0000000000000000000000000 0 0000 00011111111 01011 111111 35
Q ss_pred hccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHHHH
Q 016882 300 VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFFMS 367 (381)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 367 (381)
++++ +.++.+.+.......++.....++|.+.++.|+ +..++.....+.++..+++.++..+.
T Consensus 294 ll~~----~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~-~~~~aa~l~Siigi~~i~gRi~~G~l 356 (509)
T KOG2504|consen 294 LLKD----PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGL-SSNDAAFLLSIIGVSDIIGRIILGLL 356 (509)
T ss_pred HHcC----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-ChhhhHHHHHHHHHhhhhhhhhhhhh
Confidence 6665 445555555555666788889999999999999 88999999999999999999986654
No 71
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.83 E-value=1.6e-19 Score=171.39 Aligned_cols=241 Identities=17% Similarity=0.115 Sum_probs=174.8
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH-----
Q 016882 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL----- 143 (381)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~----- 143 (381)
.......|.+.++ ++.+..+.|++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.+..+.
T Consensus 34 ~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 106 (417)
T PRK10489 34 GLLGVAVPVQIQM-------MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLP 106 (417)
T ss_pred HHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcC
Confidence 3444456666555 6778999999999999999999999999999999999999888877776655442
Q ss_pred hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHH
Q 016882 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (381)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~ 223 (381)
.++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+|+.+++.+.+.. +|++.|++.++.
T Consensus 107 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~~~~~~~~~ 185 (417)
T PRK10489 107 EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAWNYGLAAAG 185 (417)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHHHHHHHHHH
Confidence 4678899999999999999888888999999999999999999999999999999999999998876 899999988888
Q ss_pred HHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccc
Q 016882 224 AVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHG 303 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (381)
.++.++..+.+|++++.. +++ + ...+ +....++..+++
T Consensus 186 ~~~~~~~~~~l~~~~~~~-------~~~---------------------~---~~~~-----------~~~~~~~~~~~~ 223 (417)
T PRK10489 186 TFITLLPLLRLPALPPPP-------QPR---------------------E---HPLR-----------SLLAGFRFLLAS 223 (417)
T ss_pred HHHHHHHHHhCCCCCCCC-------ccc---------------------c---cchH-----------HHHHHHHHHHcC
Confidence 777666666677653210 000 0 0000 001123344555
Q ss_pred cchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 304 KCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+..+...+...+..+ ......+.|.+.++ .|+ +...........++..+++.++.-
T Consensus 224 ~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~g~-~~~~~g~~~~~~~~g~~ig~~~~~ 280 (417)
T PRK10489 224 PVVGGIALLGGLLTM-----ASAVRVLYPALADEVWQM-GAAQIGLLYAAVPLGAALGALTSG 280 (417)
T ss_pred hHHHHHHHHHHHHHH-----HHhHHHhhHHHHHhccCC-ChhHhHHHHHHHHHHHHHHHHHHH
Confidence 544333332222111 23345567777777 688 666667777777777777777644
No 72
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.83 E-value=3.6e-18 Score=152.84 Aligned_cols=254 Identities=20% Similarity=0.203 Sum_probs=205.9
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~ 134 (381)
+......++.++......+.+|++.+. ++++..+++++..+++.++.+.+++.|++.+|+|+|+.+++|+.+.
T Consensus 16 v~~t~lFfl~G~~~~l~diLip~l~~~-------f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~ 88 (422)
T COG0738 16 VLLTSLFFLWGFITCLNDILIPHLKEV-------FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLY 88 (422)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHH-------hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHH
Confidence 444555678888888999999999987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH---HhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc--
Q 016882 135 LVGALVTA---LAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL-- 209 (381)
Q Consensus 135 ~~~~~~~~---~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-- 209 (381)
++++.+.. ...++..++++-++.|.|.+...+..+.++..+.+++.....+++.+..+++|+.++|.+++.+..+
T Consensus 89 avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~ 168 (422)
T COG0738 89 AVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGV 168 (422)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 99999885 4568999999999999999999999999999999999999999999999999999999999998863
Q ss_pred ----------------cchhHHHHHhhHHHHHHHHHHHhhcc--cchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCC
Q 016882 210 ----------------VAGWRYMYGASTPLAVIMGMGMWWLP--ASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSI 271 (381)
Q Consensus 210 ----------------~~~w~~~f~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (381)
...|+++|.+.+...+++.+.....+ +.+. ++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~-----------------~~------------- 218 (422)
T COG0738 169 ALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV-----------------AA------------- 218 (422)
T ss_pred hhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc-----------------cc-------------
Confidence 12578888887777776665555432 2210 00
Q ss_pred CCCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHH
Q 016882 272 GDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVS 350 (381)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 350 (381)
+++.+.+.....+++++++.+.-.+..+++...+ ..+..|.+.++.+ .|. +..++....
T Consensus 219 ---------------~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~E----va~gsfl~~y~~~~~g~-~~~~aa~~~ 278 (422)
T COG0738 219 ---------------PSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAE----VAIGSFLVSYLEELLGL-NEQQAAYYL 278 (422)
T ss_pred ---------------ccccccccchHHHHHhChHHHHHHHHHHHHHhHH----HHHHHHHHHHHHhcCCc-cHHHHHHHH
Confidence 0001111125678888887777666666665554 5666777888777 577 888899999
Q ss_pred HHHHHHHHHHhHHHH
Q 016882 351 ILLGLFKVGSCTLFF 365 (381)
Q Consensus 351 ~~~~~~~~i~~~~~~ 365 (381)
+.+.+..++|.+++.
T Consensus 279 s~~~~~~~vGRFig~ 293 (422)
T COG0738 279 SFFWVGFMVGRFIGS 293 (422)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
No 73
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.83 E-value=3.7e-18 Score=160.92 Aligned_cols=146 Identities=21% Similarity=0.245 Sum_probs=133.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|++..+.|++.+...+...+.+++.|+++||+|||+++..+.++.+++.+++.+.++++.++++|++.|++.+...+..
T Consensus 41 ~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~ 120 (400)
T PRK11646 41 LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPR 120 (400)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHH-Hhhccc
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG-MWWLPA 236 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~-~~~~~~ 236 (381)
.+++.|++|+++|++++++......+|..+||.+++.+. .. +||+.|++.++..++..++ .++.||
T Consensus 121 ~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 121 TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-DFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999998 44 9999999988877665433 333443
No 74
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.82 E-value=6.1e-18 Score=162.33 Aligned_cols=184 Identities=18% Similarity=0.253 Sum_probs=145.8
Q ss_pred hHHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH
Q 016882 47 VSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE 126 (381)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~ 126 (381)
.++.+..+...++.....++.....+..++.+..+ +|-+ ....|+.+...++..++.++.|+++|.||||..
T Consensus 39 s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-------iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~ 110 (599)
T PF06609_consen 39 SPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-------IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF 110 (599)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-------cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH
Confidence 34444444445554444445555555666777776 6754 678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHh
Q 016882 127 LILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (381)
Q Consensus 127 l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 206 (381)
++.+.++..++.++++.++|...++.+..+.|+|.|.... ....++|..|.|.|....++...........++.++..+
T Consensus 111 ~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~ 189 (599)
T PF06609_consen 111 FIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLF 189 (599)
T ss_pred HHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHh
Confidence 9999999999999999999999999999999999886664 466689999999999988887777767777888888777
Q ss_pred hcccchhHHHHHhhHHHHHHHHHHHhhcccchhH
Q 016882 207 VDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240 (381)
Q Consensus 207 ~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~ 240 (381)
.... +|||.|++.+++..+.+++.+++..+|++
T Consensus 190 ~~~~-~WRw~~~~~~i~~~i~~vl~~~fY~PP~~ 222 (599)
T PF06609_consen 190 AAHS-GWRWIFYIFIIWSGIALVLIFFFYFPPPR 222 (599)
T ss_pred ccCC-CcchHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 6654 99999999999887766555544444443
No 75
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.82 E-value=4.6e-18 Score=160.80 Aligned_cols=168 Identities=20% Similarity=0.141 Sum_probs=141.5
Q ss_pred HhhhcccccccccccccccCCCCCCCccccCChhH-----HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 016882 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVE-----IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (381)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~ 135 (381)
.++.++......+.+|.+.++ +|.+..+ .+++.+++.++..+++++.|+++||+|||+.+..+.++.+
T Consensus 23 ~~~~~~~~~~~~~~l~~~~~~-------~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 23 CFLTGAAFSLVMPFLPLYVEQ-------LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHhhhhHHHHHHH-------hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 344455555666677777766 6777544 4889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 016882 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 215 (381)
++.+++.+.++++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|..+++.+++.+.+.. +||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~ 173 (408)
T PRK09874 96 IVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY-GLRP 173 (408)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHH
Confidence 999988889999999999999999865 55777888999999999999999999999999999999999998876 9999
Q ss_pred HHHhhHHHHHHHHHHH-hhcccc
Q 016882 216 MYGASTPLAVIMGMGM-WWLPAS 237 (381)
Q Consensus 216 ~f~i~~~~~~~~~~~~-~~~~~~ 237 (381)
.|++.+++.++..+.. ++.||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC
Confidence 9999988877655444 445554
No 76
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.81 E-value=7.4e-19 Score=158.23 Aligned_cols=238 Identities=20% Similarity=0.190 Sum_probs=183.8
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhch---
Q 016882 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD--- 146 (381)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~--- 146 (381)
..++..+.+.++ +|+|+.|.+++.++..+...+..++.|.+.||+|.|++..+++++..+.++..+++.+
T Consensus 32 l~s~l~~~i~~~-------~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~ 104 (417)
T COG2223 32 LFSPLGVFIKSD-------FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPS 104 (417)
T ss_pred HHHHHHhhhccc-------cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 445555666666 8999999999999999999999999999999999999999999999999999988754
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccch---hHHHHHhhHHH
Q 016882 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG---WRYMYGASTPL 223 (381)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~---w~~~f~i~~~~ 223 (381)
+|.+++++++.|++.+ .++....++++++|++++|.++|+.. ..++|..+...++.++.... + |+....+..+.
T Consensus 105 ~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~-g~~~w~~~~~i~~~~ 181 (417)
T COG2223 105 TWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF-GFLAWRNVAGIYVVA 181 (417)
T ss_pred hHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHH
Confidence 5599999999999755 77888899999999999999999999 88999999999998888877 6 99999999888
Q ss_pred HHHHHHHHh-hcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhcc
Q 016882 224 AVIMGMGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFH 302 (381)
Q Consensus 224 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (381)
.++..+..+ .+.|.|...... ++..+..++.+++
T Consensus 182 l~v~~v~~~~~~~d~p~~r~~~---------------------------------------------~~~~~~~~~~v~~ 216 (417)
T COG2223 182 LAIAAVLAWLGMNDVPEHRASV---------------------------------------------KPQLPAQLKAVFS 216 (417)
T ss_pred HHHHHHHHHHHhCCChhhhccc---------------------------------------------cccchhHHHHHhc
Confidence 888655554 466655420000 0000133455565
Q ss_pred ccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHc-CCCCCchhHHHHHHHHHHHHHHhHHHHHH
Q 016882 303 GKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKVGSCTLFFMS 367 (381)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 367 (381)
+++.|.+ .+..+.++.++..++.+.|.++++. |. +..++........+.+.+...++-..
T Consensus 217 ~~~~W~l----sllY~~tFG~Fvgfs~~l~~~~~~~fg~-~~~~Ag~~a~~f~~~g~l~Rp~GG~L 277 (417)
T COG2223 217 NKDTWLL----SLLYFATFGGFVGFSAYLPMYLVTQFGL-SPVTAGLIAFLFPLIGALARPLGGWL 277 (417)
T ss_pred CcchHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcCC-ChhhHHHHHHHHHHHHHHHHhccchh
Confidence 5544443 3334556677888999999998765 88 66777777777777666666665543
No 77
>PTZ00207 hypothetical protein; Provisional
Probab=99.81 E-value=7.3e-18 Score=162.76 Aligned_cols=153 Identities=18% Similarity=0.179 Sum_probs=126.5
Q ss_pred cccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh------ch
Q 016882 73 CATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA------PD 146 (381)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~------~~ 146 (381)
...+.+.++ +|++..+.+++.++. ....+++++.|++.||+|||+++.++.+++.++.++++++ ++
T Consensus 48 v~s~~L~~~-------lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 48 LISGAMQAR-------YNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHHHH-------hCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc
Confidence 345566666 899999999998874 4556778889999999999999999999999999999987 68
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
++.+++.|++.|+|.+...+.....+.+++| ++||++.|+...+.++|..+.+.+...+... +|+..|++.+++.++
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~v 196 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALV 196 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHH
Confidence 9999999999999999888888999999997 7899999999999999998655555544442 788888888888777
Q ss_pred HHHHH-hhccc
Q 016882 227 MGMGM-WWLPA 236 (381)
Q Consensus 227 ~~~~~-~~~~~ 236 (381)
..++. +++++
T Consensus 197 v~ll~~~~vr~ 207 (591)
T PTZ00207 197 VGILAIVFMRL 207 (591)
T ss_pred HHHHHHhheeC
Confidence 54443 44433
No 78
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.81 E-value=3.9e-17 Score=144.13 Aligned_cols=245 Identities=23% Similarity=0.199 Sum_probs=201.1
Q ss_pred HHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 016882 60 GGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL 139 (381)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~ 139 (381)
..+.---..+..++.++++.++ +|+|.+..|+++++..+...+.+++..+++.|+|.++.+..++++..++.+
T Consensus 20 ia~NLR~~itsvgPLL~~Ir~~-------~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~ 92 (395)
T COG2807 20 IAFNLRPAITSVGPLLDEIRQD-------LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGIL 92 (395)
T ss_pred HHhccchhhhhhhhhHHHHHHH-------hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3344455577888999999988 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHh
Q 016882 140 VTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGA 219 (381)
Q Consensus 140 ~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i 219 (381)
+-... +...++.+-.+.|.|.+...+..+..+.+.|| |+-+..++++....++|..+++.+..++.++.++||....+
T Consensus 93 iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~ 170 (395)
T COG2807 93 IRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGF 170 (395)
T ss_pred HHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHH
Confidence 98887 77888999999999999999999999999999 55699999999999999999999999999887789999999
Q ss_pred hHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchh
Q 016882 220 STPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLRE 299 (381)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (381)
.+.++++.++.++. ...|.. . .+.+.+..+...
T Consensus 171 WAl~allAl~~WlP--q~~r~~---~------------------------------------------~~~~~~~~~~~~ 203 (395)
T COG2807 171 WALLALLALLIWLP--QALREQ---A------------------------------------------ASIATKLVSVRK 203 (395)
T ss_pred HHHHHHHHHHHHhh--hccccc---c------------------------------------------cccccccccccc
Confidence 99998887776653 321100 0 001222333456
Q ss_pred hccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 300 VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+++++.-|.+.+.+. .+...++....|+|.++.+.|+ +.+++....++..+.++..+++.-
T Consensus 204 vw~~~~aW~vtLfmG----lqS~~~Y~~~~WLP~ili~~G~-sa~~aG~llsl~~l~~~~~~ll~P 264 (395)
T COG2807 204 VWRSPLAWQVTLFMG----LQSLLYYIVIGWLPAILIDRGL-SAAEAGSLLSLMQLAQLPTALLIP 264 (395)
T ss_pred cccCchhHHHHHHHH----hhHHHHHHHHHHHHHHHHHcCC-CHHHhhhHHHHHHHHHHHHHHHHH
Confidence 788865555544444 4444578889999999999999 888888888888888888887744
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.81 E-value=9.2e-18 Score=162.06 Aligned_cols=168 Identities=19% Similarity=0.183 Sum_probs=138.2
Q ss_pred hhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHH-HHHHHHHHH
Q 016882 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRRE-LILAALLYL 135 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grk~~-l~~~~~~~~ 135 (381)
+..++.....+..+|...++ .|.+.++.+.+ +.....+ ++++++|+++||+ |||+. +.++.++.+
T Consensus 22 ~~~gl~~~~~~~~l~~~l~~-------~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~ 92 (491)
T PRK11010 22 FASGLPLALTSGTLQAWMTV-------ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHh-------CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHH
Confidence 45566666777777877776 68999999997 3333333 6899999999999 99885 667777777
Q ss_pred HHHHHHHHh---chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccch
Q 016882 136 VGALVTALA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG 212 (381)
Q Consensus 136 ~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 212 (381)
++...+++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...++.+|.++++.++..+.+...|
T Consensus 93 ~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G 172 (491)
T PRK11010 93 VAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG 172 (491)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 777777664 47888999999999999999999999999999999999999999999999999999999999884349
Q ss_pred hHHHHHhhHHHHHHHHHHHhhcccch
Q 016882 213 WRYMYGASTPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 213 w~~~f~i~~~~~~~~~~~~~~~~~~~ 238 (381)
||..|++.+++.++..+..++.||++
T Consensus 173 Wr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 173 WQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999988777766666677754
No 80
>PRK10054 putative transporter; Provisional
Probab=99.80 E-value=4.9e-18 Score=159.84 Aligned_cols=147 Identities=18% Similarity=0.207 Sum_probs=131.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|++..+.|++.+++.++..+++++.|+++||+|||++++++.++.+++.++.++.++++.++++|.+.|.+.+...+..
T Consensus 38 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 117 (395)
T PRK10054 38 YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVL 117 (395)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999998888788888
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHH-hhcccc
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM-WWLPAS 237 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~-~~~~~~ 237 (381)
..+..|..|+++|++++++.....++|..++|.+++.+.+ . +|+..|++.+++.++.++.. +++|++
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~-g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 118 KAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q-SINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999875 4 89999998888877754433 335543
No 81
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.79 E-value=1.8e-17 Score=153.94 Aligned_cols=159 Identities=16% Similarity=0.108 Sum_probs=129.0
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHH-HHHHHHHHHHHHHHHH
Q 016882 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRRE-LILAALLYLVGALVTA 142 (381)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grk~~-l~~~~~~~~~~~~~~~ 142 (381)
...++..|.+.++ +|+|.++.+++.++ .+...+ .+++|++.||+ ||||. ++.+.++.++.....+
T Consensus 5 ~~~~~~~~~~~~~-------~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~ 75 (356)
T TIGR00901 5 GLVGNTLPYWLRS-------KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS 75 (356)
T ss_pred hhHHhHHHHHHHH-------cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 3445566777776 79999999999766 455554 99999999998 89887 4567777777766666
Q ss_pred Hh---chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccch-------
Q 016882 143 LA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG------- 212 (381)
Q Consensus 143 ~~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~------- 212 (381)
+. .+++.+.+..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+.. +
T Consensus 76 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~-g~~~~~~~ 154 (356)
T TIGR00901 76 FLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE-FANTGLIT 154 (356)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc-cccccccc
Confidence 66 466777788888888888889999999999999999999999999999999999999999988776 5
Q ss_pred -hHHHHHhhHHHHHHHHHHHhh-cccc
Q 016882 213 -WRYMYGASTPLAVIMGMGMWW-LPAS 237 (381)
Q Consensus 213 -w~~~f~i~~~~~~~~~~~~~~-~~~~ 237 (381)
||..|++.+++.++.++..++ .||+
T Consensus 155 ~wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 155 LWGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999999887776555444 4553
No 82
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.79 E-value=2.7e-17 Score=155.26 Aligned_cols=171 Identities=20% Similarity=0.176 Sum_probs=143.8
Q ss_pred HHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chHH-HHHHHHH
Q 016882 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRR-ELILAAL 132 (381)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grk~-~l~~~~~ 132 (381)
..++.+++..+.....+|.+.++ .|++.+++|++..+... .+.++++|+++||+ |||| .+.++.+
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~-------~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~ 76 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTV-------EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQV 76 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHH
Confidence 34567777778888888888877 69999999999777765 59999999999999 8765 6888888
Q ss_pred HHHHHHHHHHHh---chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 133 LYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 133 ~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
+.+++..+.++. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|..+++.++..+.+.
T Consensus 77 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 77 GLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 887777777776 35788888888888888888999999999999999999999999999999999999999998885
Q ss_pred cchhHHHHHhhHHHHHHHHHHHhhcccch
Q 016882 210 VAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 210 ~~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 238 (381)
..|||..|++.+++.++..+..++.||++
T Consensus 157 ~~gw~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 157 VLGWGNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 44999999999888776655556667654
No 83
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=3.7e-18 Score=150.98 Aligned_cols=147 Identities=24% Similarity=0.264 Sum_probs=121.9
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (381)
+.+....|.+.+.+.++..+.++.+|.++||+|||++++++.+..++...+.+.+.|+..++++|++.|+..| .....-
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHH
Confidence 4566788999999999999999999999999999999999999999999999999999777778999999988 556678
Q ss_pred HHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc---ccchhHHHH--HhhHHHHHH-HHHHHhhcccc
Q 016882 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD---LVAGWRYMY--GASTPLAVI-MGMGMWWLPAS 237 (381)
Q Consensus 170 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~w~~~f--~i~~~~~~~-~~~~~~~~~~~ 237 (381)
++++|.+++++|+.+++.....+++|..+||++++.+.+ ..+.+..++ ++..++... .....+++||+
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999987 222222222 222222222 34456678998
No 84
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.79 E-value=2e-17 Score=155.11 Aligned_cols=245 Identities=12% Similarity=0.041 Sum_probs=166.2
Q ss_pred HHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHH----HHHHHHH
Q 016882 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL----ILAALLY 134 (381)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l----~~~~~~~ 134 (381)
+.++.+.+..+...+.+|.+.++ +|.|..++|++.+++.+...++++++|+++||+||+... .++..+.
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~-------~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKG-------IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 34455555667777888888877 899999999999999999999999999999999985433 2222222
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 016882 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (381)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 214 (381)
.+ ..+..+++++.+++.|.+.|.+.+...+...++..++ .++|++..+....+.++|.+++|++++.+.+.. |||
T Consensus 84 ~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~~ 158 (382)
T TIGR00902 84 AA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DEQ 158 (382)
T ss_pred HH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-Chh
Confidence 21 2344678899999999999998888888888887665 478899999999999999999999999999987 999
Q ss_pred HHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhcccccc
Q 016882 215 YMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 294 (381)
Q Consensus 215 ~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (381)
..|++.++..++.++ .+..+++++. +++ ++ + ++..+.
T Consensus 159 ~~f~~~~~~~~~~~~-~~~~~~~~~~--------~~~-----~~-------------~----------------~~~~~~ 195 (382)
T TIGR00902 159 NILAILTAGLAFMLI-GFLIKPTIPP--------KDA-----IP-------------E----------------DESQGD 195 (382)
T ss_pred HHHHHHHHHHHHHHH-HHHcCCCCCC--------Ccc-----cc-------------c----------------cccccc
Confidence 999887665333333 3333332110 000 00 0 000112
Q ss_pred ccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHH
Q 016882 295 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTL 363 (381)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~ 363 (381)
.+.++++++|..+...+...+.. .....+..|.|.++++.|. +.........+..+..+++.++
T Consensus 196 ~~~~~~l~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~l~~~g~-s~~~~g~l~~~~~~~~i~~~~~ 259 (382)
T TIGR00902 196 SAFIALLKNPMNLRFLAAVCLIQ----GAHAAYYGFSAIYWQAAGI-SASATGLLWGIGVLAEIIIFAF 259 (382)
T ss_pred hhHHHHHcChHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC-CHhHHHHHHHHHHHHHHHHHHH
Confidence 23567777765444433333322 2244555677777788898 6566665555555555555444
No 85
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.78 E-value=2.9e-17 Score=153.99 Aligned_cols=163 Identities=17% Similarity=0.103 Sum_probs=125.9
Q ss_pred hhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchH----HHHHHHHHHHHHH
Q 016882 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR----RELILAALLYLVG 137 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk----~~l~~~~~~~~~~ 137 (381)
+.+....+...+.+|.+.++ +|.|..+.|++.+++.++..++++++|++.||+||| +.+.++..+. .
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~-------~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~ 84 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKG-------QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--A 84 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHh-------cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--H
Confidence 33344456667777777776 799999999999999999999999999999999984 3332222221 2
Q ss_pred HHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 016882 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (381)
Q Consensus 138 ~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 217 (381)
.......+++|.+++.|++.|++.+...+...+++.++ .++|++..+.......+|.++||++++.+.++. |||..|
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~~f 161 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQAIL 161 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhHHH
Confidence 22233457899999999999999988888888888877 356888888898889999999999999999987 999999
Q ss_pred HhhHHHHHHHHHHHhhccc
Q 016882 218 GASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 218 ~i~~~~~~~~~~~~~~~~~ 236 (381)
++.++..++.++..++.||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~ 180 (382)
T PRK11128 162 WILTAGVASMLLGQLLRPT 180 (382)
T ss_pred HHHHHHHHHHHHHHHccCC
Confidence 8887655544443333444
No 86
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.77 E-value=2.7e-17 Score=159.14 Aligned_cols=176 Identities=16% Similarity=0.026 Sum_probs=138.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH---HHHhchHHHHHHHHHHHHHHHhhHh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV---TALAPDFIIMVVGRFVFGIGIGLAM 165 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~r~l~G~~~g~~~ 165 (381)
+|.+..+.++..+...++..++.++.|+++||+|||+.+.++.++..++.+. ...+++...+++++++.|++.+...
T Consensus 281 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 360 (490)
T PRK10642 281 LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFT 360 (490)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 6888888888888899999999999999999999999988877654433322 2224467778889999998888777
Q ss_pred HHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhh
Q 016882 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCA 245 (381)
Q Consensus 166 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (381)
.....++.|++|++.|++++++.+....+++.++|.+.+.+.+..++|+..+++..+++++.++..+++||+|+|+.++.
T Consensus 361 g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~ 440 (490)
T PRK10642 361 GVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGA 440 (490)
T ss_pred HHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCc
Confidence 77888899999999999999985554566678889999888876546888887777777777777778899999866432
Q ss_pred ccccCcchhhHHHHHHHHHHHhC
Q 016882 246 MKRKGDMQDLRESAISCLCRLRG 268 (381)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~ 268 (381)
+ +.+++++|+++.++++++
T Consensus 441 ~----~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 441 T----PAASDIQEAKEILVEHYD 459 (490)
T ss_pred c----ccccchhhHHHHhhcccc
Confidence 1 223467999999999873
No 87
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.76 E-value=6.2e-17 Score=172.41 Aligned_cols=148 Identities=18% Similarity=0.134 Sum_probs=120.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH---HhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---LAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+....+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. ..++++.++++|++.|++.+...+..
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 345679999999999999999999999999999999988876665554433 45789999999999999999999999
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc--------cchhHHHHHhhHHHHH-HHHHHHhhcccchh
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL--------VAGWRYMYGASTPLAV-IMGMGMWWLPASPR 239 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~~~w~~~f~i~~~~~~-~~~~~~~~~~~~~~ 239 (381)
.+++.|++|+++|++++++...+..+|.++|+.+++++.+. .++|++.+.+.++... +.+++.+++|++|.
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 99999999999999999999999999999999999999865 3245555544443333 34444555677653
No 88
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.76 E-value=4e-17 Score=173.52 Aligned_cols=228 Identities=14% Similarity=0.030 Sum_probs=161.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHH---HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHH
Q 016882 93 SVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL---AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (381)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (381)
....++..+++.+.+.++++++|+++||+|||+++.. ..++..+..+.....++++.++++|+++|++.+...+...
T Consensus 51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 51 NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHH
Confidence 3567888999999999999999999999999997533 2222233333333458999999999999999999999999
Q ss_pred HHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhcccc
Q 016882 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRK 249 (381)
Q Consensus 170 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (381)
+++.+++|+++|++++++.+.+..+|.++||.+++++.... +|++.|++.+++.++.+++.+++|+++.. . +
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~ 202 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG-NFVILVALLMGIAVLGWLASLFIPKTGNA---A----P 202 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhCCCCCCC---C----C
Confidence 99999999999999999999999999999999999999886 99999966666666666666667665320 0 0
Q ss_pred CcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHh
Q 016882 250 GDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLY 329 (381)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (381)
+.. . ..... ++....++.+.+++.++...+..++..+. ...+..
T Consensus 203 ~~~------------------~----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 246 (1140)
T PRK06814 203 DLK------------------I----DRNII----------RSTITLLKYAKADKRIWLAILGISWFWLV----GAVVLS 246 (1140)
T ss_pred CCe------------------e----ccchH----------HHHHHHHHHHhcCchHHHHHHHHHHHHHH----HHHHHH
Confidence 000 0 00000 00012355666666555544443333322 234445
Q ss_pred cHHHHHHH-cCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 330 YAASILQS-AGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 330 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
+.|.++++ .|. +...........+++.++|.++..
T Consensus 247 ~~p~~~~~~~g~-~~~~~g~~~~~~~~g~~ig~~~~g 282 (1140)
T PRK06814 247 QLPLLAKETLGG-DENVATLFLAVFSVGVAVGSFLAS 282 (1140)
T ss_pred HhHHHHHHHcCC-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777665 587 667777777888888888777654
No 89
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.75 E-value=7.1e-16 Score=145.17 Aligned_cols=148 Identities=19% Similarity=0.214 Sum_probs=114.2
Q ss_pred ccCChhHHHHHHHHHHH-HHHHHHHHHHHHHHhhchHHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLY-GALIGSILAFNIADILGRRREL-ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Grk~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+|.+.++.|++.+...+ +..++.+++++ .||+|||+.+ ..+.++..++..+.+++++++.+++.+.+.|...+...+
T Consensus 46 ~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 124 (393)
T PRK15011 46 VHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANP 124 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHH
Confidence 89999999999876555 55666655566 9999999875 455666667777788889998887666665555556788
Q ss_pred HHHHHHHhhCCcccch--hHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHH-Hhhcccch
Q 016882 167 AAPMYIAETAPTPMRG--QLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG-MWWLPASP 238 (381)
Q Consensus 167 ~~~~~~~~~~~~~~r~--~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~-~~~~~~~~ 238 (381)
....++.++.+++.|. ...++.+.+.++|.+++|++++.+.+.. |||..|++.++..++..+. .++.||.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 125 QMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF-SFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 8888888888766553 4457888899999999999999999877 9999999998887765544 44567654
No 90
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.72 E-value=1.1e-15 Score=144.15 Aligned_cols=142 Identities=17% Similarity=0.147 Sum_probs=110.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH---Hh-----chHHHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---LA-----PDFIIMVVGRFVFGIG 160 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~---~~-----~~~~~~~~~r~l~G~~ 160 (381)
+|.+..+.+++.+++.++..++++++|+++||+|||+.++.+.....++..... +. +.+..+++.+++.|++
T Consensus 33 ~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 112 (396)
T TIGR00882 33 NGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFV 112 (396)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999887666654433221 11 1234456678888888
Q ss_pred HhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhc
Q 016882 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (381)
Q Consensus 161 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 234 (381)
.+...+....+..+..+ +++...+......++|.++++.+++.+.+. +||+.|++.+++.++..+..++.
T Consensus 113 ~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~--~~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 113 FSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSI--DPQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred hccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhcc--CchHHHHHHHHHHHHHHHHHHHh
Confidence 88888888877777543 345566777788899999999999887653 89999999988888765555443
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.71 E-value=3.5e-15 Score=143.51 Aligned_cols=146 Identities=12% Similarity=0.119 Sum_probs=132.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.++++|++.|+|.|...+.
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 122 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKAN 122 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCC
Confidence 68999999999999999999999999999999 89999999999999999999999888889999999999999999999
Q ss_pred HHHHHHhhCCccc---chhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcc
Q 016882 168 APMYIAETAPTPM---RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 168 ~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 235 (381)
..++++|++|+++ |+.+.++++.+.++|.++|+.+++.+.+.. +|++.|++.++..++.++..++.+
T Consensus 123 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 123 PSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999998764 888999999999999999999999999887 899999998876655544444433
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.71 E-value=3.3e-16 Score=150.71 Aligned_cols=146 Identities=14% Similarity=0.133 Sum_probs=127.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPDFII-MVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grk~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~r~l~G~~~g~~~~ 166 (381)
+|++..+..++.+.+.....+..+++|+++|| +|||++++++.++++++.++++++.+... ++++|.++|+|.|...+
T Consensus 45 lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~ 124 (489)
T PRK10207 45 LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKA 124 (489)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccC
Confidence 89999999999999998999999999999999 99999999999999999999998876444 55899999999999999
Q ss_pred HHHHHHHhhCCcc--cchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcc
Q 016882 167 AAPMYIAETAPTP--MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 167 ~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 235 (381)
...+++.|.+|++ +|+.+.++++.+.++|..++|.+++++.++. |||+.|++.++..++.++.+++.+
T Consensus 125 ~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 125 NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-GYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999877 4578999999999999999999999999988 999999997664444444444443
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=5.1e-17 Score=144.67 Aligned_cols=147 Identities=18% Similarity=0.304 Sum_probs=138.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
++-+..++|++.+...+...+.+++.|.+.||+|+|..+++|++++...++++++.+++++++++|.++|+|.++.....
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCccc-chhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhccc
Q 016882 169 PMYIAETAPTPM-RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 169 ~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 236 (381)
.+++++.+|.++ |++++|+...+.++|..+||++++.+.+.. |.+..|++.++++++...+.+++-|
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHheeC
Confidence 999999999866 699999999999999999999999999998 9999999999999997766666433
No 94
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.68 E-value=7.6e-15 Score=139.45 Aligned_cols=143 Identities=22% Similarity=0.182 Sum_probs=100.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH---hc-----hHHHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL---AP-----DFIIMVVGRFVFGIG 160 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~---~~-----~~~~~~~~r~l~G~~ 160 (381)
+|++..+.|++.+++.++..++++++|+++||+|||++++++..+.+++...... .+ .+....+++++.|.+
T Consensus 41 ~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (420)
T PRK09528 41 NGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFG 120 (420)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 7999999999999999999999999999999999999998876665544332211 11 111122333334433
Q ss_pred HhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcc
Q 016882 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 161 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 235 (381)
.....+....+..+. .++++..++.......+|..+++++++.+.+. +|++.|++.+++.++.++..++.+
T Consensus 121 ~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 121 FLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFNI--NPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred hccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHhc--CchHhHHHHHHHHHHHHHHHhccc
Confidence 333333333333322 24567788888888999999999999988764 899999998888777666555543
No 95
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.65 E-value=3.1e-15 Score=118.92 Aligned_cols=136 Identities=27% Similarity=0.455 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcc
Q 016882 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP 179 (381)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~ 179 (381)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.++....++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788899999999999999999999999999999888888899999999999999999999999999999999999
Q ss_pred cchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh-ccc
Q 016882 180 MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPA 236 (381)
Q Consensus 180 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~-~~~ 236 (381)
+|++..++.+....+|..+++.+.+.+.+.. +|++.+++.+++.++..+..++ .||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999998876 9999999988887776554444 444
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.63 E-value=1.4e-14 Score=140.25 Aligned_cols=143 Identities=16% Similarity=0.128 Sum_probs=122.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grk~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+|++..+.+++.+.+........+++|+++|| +|||+.+.++.++.+++..++++++ +.+.++++|++.|++.|...+
T Consensus 52 lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~ 131 (500)
T PRK09584 52 LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKA 131 (500)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccC
Confidence 79999999998888776767777899999999 5999999999999999988888864 566777889999999998888
Q ss_pred HHHHHHHhhCCccc--chhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHh
Q 016882 167 AAPMYIAETAPTPM--RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 167 ~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~ 232 (381)
...+++.|++|+++ |..+.++++.+.++|..++|.+++++.+.. |||+.|++.++..++.++.++
T Consensus 132 ~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~-g~~~~F~i~~i~~~i~~i~~~ 198 (500)
T PRK09584 132 NPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY-GWSVAFALSVVGMLITVVNFA 198 (500)
T ss_pred CHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHH
Confidence 88999999998643 456788889999999999999999999887 999999998876555544433
No 97
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.63 E-value=5.4e-14 Score=131.13 Aligned_cols=274 Identities=17% Similarity=0.150 Sum_probs=180.9
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhhccccccccccc-ccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016882 41 SPENYSVSAAILPFLFPALGGLLYGYDIGSTSCAT-ISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIAD 119 (381)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 119 (381)
+++..+|+..++..+.. ++.+...+...+.. |...+ -|.+.+.+..|++.++..++.+++++.+|+.+.
T Consensus 27 ~~~~t~wrsi~l~~~~s----fl~~v~~sI~~~s~wpYl~~------lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~ 96 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNS----FLVAVQFSIYLTSMWPYLQK------LDPTATATFFGLVIAASSLGHAIFSLIFGIWSN 96 (488)
T ss_pred cccCCchHhHHHHHHHH----HHHhhhheEEEeecchhhhh------cCCCCCcchhhHHHHHHHHHHHhcchhhccccc
Confidence 34455666666654444 33333433333322 22222 014778899999999999999999999999999
Q ss_pred hhch-HHHHHHHHHHHHHHHHHH-HHh---c-hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHH
Q 016882 120 ILGR-RRELILAALLYLVGALVT-ALA---P-DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIV 193 (381)
Q Consensus 120 ~~Gr-k~~l~~~~~~~~~~~~~~-~~~---~-~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 193 (381)
|.+. |+.++.+.++..+++++. ++. + ..+.++++|++.|+|.| .....-+|+++-...+.|.++.+....+..
T Consensus 97 k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~v 175 (488)
T KOG2325|consen 97 KTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFV 175 (488)
T ss_pred ccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHH
Confidence 9986 888899999999999998 442 3 57889999999999987 556779999998888999999999999999
Q ss_pred HHHHHHHHHHHHhhccc------------chhHHHHHhhHHHHHHHHH-HHhhcccchhHHHHhhccccCcchhhHHHHH
Q 016882 194 LGMVGGYGIGSLLVDLV------------AGWRYMYGASTPLAVIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAI 260 (381)
Q Consensus 194 ~g~~~~~~~~~~l~~~~------------~~w~~~f~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (381)
+|..+||.++..+..-. +-+..+-|+.+++.++.++ +.++++|.++....++
T Consensus 176 lg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~--------------- 240 (488)
T KOG2325|consen 176 LGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKK--------------- 240 (488)
T ss_pred HHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccc---------------
Confidence 99999998887766310 1234566777777777544 4445677654110000
Q ss_pred HHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCC
Q 016882 261 SCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGF 340 (381)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 340 (381)
.+++ ++++++ ++ +....+..+...++++.+.+..++.....-+.+.+.....+|+
T Consensus 241 --------------~~~~-~~~~~~----~~------~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w 295 (488)
T KOG2325|consen 241 --------------KRSV-EEEKSD----IE------KVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGW 295 (488)
T ss_pred --------------cccc-hhhccc----hh------hhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhcc
Confidence 0000 000000 00 0011122334445555555555555555566677777777788
Q ss_pred CCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 341 SAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
++.+...+....+.+.+++..++.+
T Consensus 296 ~~~~av~~~gi~~~~~g~ls~~~~l 320 (488)
T KOG2325|consen 296 TGSEAVLYNGITLSISGILSVILLL 320 (488)
T ss_pred ccchHHHhhhhHHHHHHHHHHHHHH
Confidence 7777777778888887777777644
No 98
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.62 E-value=1.1e-13 Score=133.41 Aligned_cols=261 Identities=19% Similarity=0.168 Sum_probs=180.7
Q ss_pred CchhHHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 016882 44 NYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR 123 (381)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr 123 (381)
.+..+.+|..-++..++..++.....+. ..+ +.-|+...+++.++..+...+.++++|.++||++|
T Consensus 9 ~~~Fr~lw~a~~iS~lG~~~~~va~~wl---v~~-----------lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~dr 74 (524)
T PF05977_consen 9 NRNFRRLWIAQLISNLGDWMQTVALAWL---VTQ-----------LTGSPLMVALVQAASTLPILLLSLFAGALADRFDR 74 (524)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHH---HHH-----------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 4456666666666666666555443332 211 34578899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-----chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHH
Q 016882 124 RRELILAALLYLVGALVTALA-----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG 198 (381)
Q Consensus 124 k~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 198 (381)
|++++.+.++..+..+..++. .+.+.+++.-++.|++.+...|...+++.|+.|+++...++++.+...++...+
T Consensus 75 rrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i 154 (524)
T PF05977_consen 75 RRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII 154 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc
Confidence 999999888776555444332 368899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhh
Q 016882 199 GYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTE 278 (381)
Q Consensus 199 ~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (381)
||.++|.+.... |-.+.|++.++..++.++.....+..++. + +.. +|
T Consensus 155 GPalgG~Lva~~-G~~~~f~inalsfl~~i~~l~~~~~~~~~----~---~~~-----~e-------------------- 201 (524)
T PF05977_consen 155 GPALGGILVAFF-GAAAAFLINALSFLISILALLRWKPPPPP----S---SLP-----RE-------------------- 201 (524)
T ss_pred cchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHccccccc----c---ccc-----hh--------------------
Confidence 999999998876 88889998888766655444444322110 0 000 00
Q ss_pred HHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH-cCCCCCchhHHHHHHHHHHH
Q 016882 279 VDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS-AGFSAASDATRVSILLGLFK 357 (381)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 357 (381)
.. .++-+.+++-+.+++..+..++...++.+. ...+...+|.+.++ .|. +...-++.....+++.
T Consensus 202 --~~-------~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~----~~a~~aLlPl~a~~~l~~-~a~~yGll~a~~gvGa 267 (524)
T PF05977_consen 202 --RF-------FSALREGLRYVRSSPPLRSVLLRSFLFNLF----ASAVWALLPLFARDVLGG-GASGYGLLLAAFGVGA 267 (524)
T ss_pred --hh-------hhhHHHHHHHHhcchHHHHHHHHHHHHHHh----hhHHHHhhhHHHHHHhCC-cHHHHHHHHHHHHHHH
Confidence 00 011123344455555544443333222221 12233346777654 466 5566677778888888
Q ss_pred HHHhHHHH
Q 016882 358 VGSCTLFF 365 (381)
Q Consensus 358 ~i~~~~~~ 365 (381)
++|+++.-
T Consensus 268 i~Gal~~~ 275 (524)
T PF05977_consen 268 ILGALLLP 275 (524)
T ss_pred HHHHHHHH
Confidence 88887743
No 99
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.61 E-value=2.9e-14 Score=135.74 Aligned_cols=144 Identities=16% Similarity=0.088 Sum_probs=119.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grk~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++.++++... +...+.++..+.++|.|...+
T Consensus 40 lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~ 119 (493)
T PRK15462 40 LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKS 119 (493)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccc
Confidence 799999999999999999999999999999999 999999999999999887776543 223344455556667777777
Q ss_pred HHHHHHHhhCCcc--cchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 167 AAPMYIAETAPTP--MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 167 ~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
...++++|.+|++ +|.++.++.+.+.++|..++|.+++++.+.. ||++.|.+.++..++.++..++
T Consensus 120 ~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 120 NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999875 7999999999999999999999999999887 9999999877655544444433
No 100
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.60 E-value=1.2e-13 Score=130.04 Aligned_cols=146 Identities=13% Similarity=0.108 Sum_probs=125.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........++.+.+++.+++.+++.|...+..
T Consensus 247 ~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~ 326 (393)
T PRK15011 247 LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIG 326 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999888888888999999999999999998887766666555555556788888889999888888877778
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhccc
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 236 (381)
..+..|.+|+ +|+++.++.+....+|..+++.+++.+.+.. +|+..|++.+++.++.++..++.||
T Consensus 327 ~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 327 MLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8888999985 5999999999999999999999999999887 9999999988888887777777765
No 101
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.59 E-value=5.3e-14 Score=140.16 Aligned_cols=141 Identities=18% Similarity=0.096 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhh
Q 016882 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (381)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~ 175 (381)
..+...+..++.+++.++.|+++||+|||+++++++++.++++++.++.++...+++++++.|++.++.++...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556778899999999999999999999999999999999999999988888888889999998888899999999999
Q ss_pred CCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccch
Q 016882 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 238 (381)
+|++.|++++|+.+....+|.+++|.+++.+... +...+|++.+++.++.+++.+++||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999999988764 456788888888777777777789874
No 102
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.59 E-value=4.2e-13 Score=126.27 Aligned_cols=174 Identities=15% Similarity=0.007 Sum_probs=131.4
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHH--HHHHHHHHHHHHHHHH-HHHHhhchHHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLI--TSGSLYGALIGSILAF-NIADILGRRRELILAA 131 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g-~l~d~~Grk~~l~~~~ 131 (381)
......++..++..+...+.+|.+.++ .|.+.+++|++ .+++.+...+.+++.+ +..||+||||.+++..
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~-------~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLRE-------DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 445556688888888888999999887 79999999997 4667888888888884 4789999999876655
Q ss_pred HHH-HHHHHHHH-H--hch-HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHh
Q 016882 132 LLY-LVGALVTA-L--APD-FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (381)
Q Consensus 132 ~~~-~~~~~~~~-~--~~~-~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 206 (381)
.+. .++....+ + ..+ ...++....+.++......+....+..|..++++++...+....+..+|.++++...+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 22222222 1 222 333444555566677777777888888999988889999999889999999999999898
Q ss_pred hcccchhHHHHHhhHHHHHHHHHHHhhccc
Q 016882 207 VDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 207 ~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 236 (381)
.+.. |||..|++.+++.++..+..+++++
T Consensus 157 ~~~~-gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 157 FGKF-GQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HHHh-CHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8887 9999999999988776665555544
No 103
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.59 E-value=1.4e-14 Score=137.68 Aligned_cols=148 Identities=14% Similarity=0.160 Sum_probs=128.6
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (381)
+.+..+.+++.++..++..++.+++|++.||+|||+.+.++.++.+++.++.+++++.+.+++++++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677889999999999999999999999999999999999999999888888899999999999999999888888888
Q ss_pred HHHHhhCCcccchhHHhH-HHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHh-hcccch
Q 016882 170 MYIAETAPTPMRGQLISL-KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW-WLPASP 238 (381)
Q Consensus 170 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~-~~~~~~ 238 (381)
.++.|.+|++.|++..+. ++....+|..+++.+.+++.+.. ||+..|.+.+++.++..+..+ +.++++
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-CchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999988766 67788999999999999999987 899999998888776544443 444443
No 104
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.58 E-value=8.6e-14 Score=132.88 Aligned_cols=149 Identities=17% Similarity=0.126 Sum_probs=118.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hch-HHHHHHHHHHHHHHHHHHHHhch------HHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGR-RRELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Gr-k~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~ 157 (381)
+|+++.+.|++.++..+..++..++.|+++|| +|| |+.++++....+++.+++...++ ...+++.+++.
T Consensus 30 ~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (437)
T TIGR00792 30 LGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILL 109 (437)
T ss_pred cCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 79999999999999999999999999999997 677 45677788888887777766543 45667788888
Q ss_pred HHHHhhHhHHHHHHHHhhC-CcccchhHHhHHHHHHHHHHHHHHHHHHHhhc------ccchhHHHHHhhHHHHHHHHHH
Q 016882 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------LVAGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 158 G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~~~w~~~f~i~~~~~~~~~~~ 230 (381)
+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ...+||+.+++.+++.++..+.
T Consensus 110 ~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 189 (437)
T TIGR00792 110 GLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLII 189 (437)
T ss_pred HHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 8888887777788888887 57899999999988888888877776665552 1238999999999888776544
Q ss_pred H-hhcccc
Q 016882 231 M-WWLPAS 237 (381)
Q Consensus 231 ~-~~~~~~ 237 (381)
. ++.||+
T Consensus 190 ~~~~~~e~ 197 (437)
T TIGR00792 190 CFFGTKER 197 (437)
T ss_pred HHcCCEec
Confidence 4 445654
No 105
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.58 E-value=2e-13 Score=129.39 Aligned_cols=142 Identities=15% Similarity=0.045 Sum_probs=104.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+|++..+.|++.+++.++..++++++|+++||+|| |+++.++.++..++..+..+.++++.+++.|++.|++.+...+.
T Consensus 33 ~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 112 (418)
T TIGR00889 33 LHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIAL 112 (418)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHH
Confidence 79999999999999999999999999999999965 77888888888888888888899999999999999987766665
Q ss_pred HHHHHH--------hhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccch
Q 016882 168 APMYIA--------ETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 168 ~~~~~~--------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 238 (381)
..+... |......|.+..| .+|.++++.+++.+... ..|+ .|++.++..++.++..+++||+|
T Consensus 113 ~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~-~~~~-~f~~~~~~~~~~~~~~~~~~e~~ 183 (418)
T TIGR00889 113 TNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIE-LSNI-QLYITAGSSALLGVFALTLPDIP 183 (418)
T ss_pred HHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhccc-chhH-HHHHHHHHHHHHHHHHhcCCCCC
Confidence 554432 2222223444444 36778888888877332 2455 35556665555555556678765
No 106
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.56 E-value=9.4e-14 Score=131.32 Aligned_cols=148 Identities=24% Similarity=0.232 Sum_probs=127.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
.|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+..++.|++.++..+..
T Consensus 250 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 329 (406)
T PRK11551 250 QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVL 329 (406)
T ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHH
Confidence 68889999999999999999999999999999999999988777777777777777788878888888999888888888
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhccc
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 236 (381)
.+++.|.+|+++|++..++.+....+|..++|.+++.+.+..++|...+++...+.++..++.++..+
T Consensus 330 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 330 YALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred HHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999987657777777777776666555554433
No 107
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.55 E-value=8.8e-14 Score=129.64 Aligned_cols=139 Identities=14% Similarity=0.084 Sum_probs=122.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchH--HHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF--IIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~g~~~~ 166 (381)
+|.+..+.+++.+...++..+++++.|++.||+|||+.+.++.++..++.++..+.++. ..+++..++.|++.+...+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 314 (377)
T TIGR00890 235 LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTIS 314 (377)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchh
Confidence 68888899999999999999999999999999999999999988888888777766542 3345667788888888888
Q ss_pred HHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHH
Q 016882 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (381)
Q Consensus 167 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~ 228 (381)
..+.++.|.+|+++|++..++.+....+|..++|.+.+.+.+.. ||++.|++.+++.++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 315 LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-GFEYTFIVTGAFALTSL 375 (377)
T ss_pred ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHHhc
Confidence 88889999999999999999999999999999999999999887 89999998888776643
No 108
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.54 E-value=4.3e-13 Score=126.57 Aligned_cols=142 Identities=20% Similarity=0.237 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHh
Q 016882 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (381)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 174 (381)
+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45666778888999999999999999999999999988888888888888888888889999999999888888888889
Q ss_pred hCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccc
Q 016882 175 TAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (381)
Q Consensus 175 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 237 (381)
.+|+++|+++.++++....+|..+++.+.+.+.+.. ||++.|++.+++.++.++..++++++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-GYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999998887 89999999988888776666655543
No 109
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.54 E-value=5.9e-13 Score=124.32 Aligned_cols=146 Identities=16% Similarity=0.162 Sum_probs=125.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|.++.+.+++.+.......++.++.|++.||+|||+.+.++.++..+..+.....++.+.+++.+++.|++.+...+..
T Consensus 230 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 309 (375)
T TIGR00899 230 LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIG 309 (375)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68889999998888888888899999999999999999988877766666666667788888889999999999888888
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhccc
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 236 (381)
..++.|..|+ +++++.++++....+|..+++.+.+.+.+.. ||+..|++.+++.++..+...+++|
T Consensus 310 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 310 MLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHheecC
Confidence 8999999985 5679999999999999999999999999887 8999999999888887776666543
No 110
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.53 E-value=3e-13 Score=124.69 Aligned_cols=160 Identities=29% Similarity=0.382 Sum_probs=141.9
Q ss_pred ccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHhch
Q 016882 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR-ELILAALLYLVGALVTALAPD 146 (381)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~-~l~~~~~~~~~~~~~~~~~~~ 146 (381)
........+.+.++. +|.+..+.+++.+...++..++.++.+++.||+|||+ .+..+..+..++.+.....++
T Consensus 191 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 191 YYGLLTYLPLYLQEV------LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHHHHHHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 333444455554431 4889999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
.+.+.+..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+.. +|++.+++.+++.++
T Consensus 265 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-~~~~~~~~~~~~~~i 343 (352)
T cd06174 265 LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGGVFLILAALALL 343 (352)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999876 999999999999888
Q ss_pred HHHHHhhc
Q 016882 227 MGMGMWWL 234 (381)
Q Consensus 227 ~~~~~~~~ 234 (381)
..+..+++
T Consensus 344 ~~i~~~~~ 351 (352)
T cd06174 344 AALLLLLL 351 (352)
T ss_pred HHHHheec
Confidence 76665543
No 111
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.53 E-value=7.2e-16 Score=148.84 Aligned_cols=283 Identities=20% Similarity=0.245 Sum_probs=3.0
Q ss_pred HHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 016882 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (381)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~ 135 (381)
..++..+......+.....+.++++. |+++.++.|++.+.+-++..+..++..++.+|..|.+.+-+|.++.+
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErR-------F~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~ 79 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERR-------FGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMG 79 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHH
Confidence 34444455577777788888899888 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-------------------------c-------------------------hHHHHHHHHHHHHHHHhhHh
Q 016882 136 VGALVTALA-------------------------P-------------------------DFIIMVVGRFVFGIGIGLAM 165 (381)
Q Consensus 136 ~~~~~~~~~-------------------------~-------------------------~~~~~~~~r~l~G~~~g~~~ 165 (381)
++++++++= . -+..+++++++.|+|....+
T Consensus 80 ~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~ 159 (539)
T PF03137_consen 80 LGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLY 159 (539)
T ss_dssp ------------------------------------------------------------------------SSS-----
T ss_pred HHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCc
Confidence 999887651 0 03567889999999999999
Q ss_pred HHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc---------------------cchhHHHHHhhHHHH
Q 016882 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL---------------------VAGWRYMYGASTPLA 224 (381)
Q Consensus 166 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------------------~~~w~~~f~i~~~~~ 224 (381)
+...+|+-|..++++-+...|+.+....+|.++|-.+++.+.+. .+.|...|++.+++.
T Consensus 160 tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 160 TLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877741 234777788888888
Q ss_pred HHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhcccc
Q 016882 225 VIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK 304 (381)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (381)
++..+.++++|+.-+...+.. ++.+...+ +.++..++..++. +..+......++-....+++++|
T Consensus 240 ~l~aipl~~FPk~lp~~~~~~-----------~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~df~~~l~~Ll~N- 304 (539)
T PF03137_consen 240 FLSAIPLFFFPKKLPGTSERQ-----------EEKESSER--KEEDSDKDSFKDP-KSKKSFGKSIKDFPKALKRLLTN- 304 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHcCCccCCCccccc-----------chhhhhhc--chhhhhhhccccc-ccccchhhhhhhHHHHHHHHhcC-
Confidence 877777777776432110000 00000000 0000000000000 00000001112223444555555
Q ss_pred chHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHc-CCCCCchhHHHHHHHHHHHHHHhHHHHHH
Q 016882 305 CLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKVGSCTLFFMS 367 (381)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 367 (381)
+.+++..+...........+..|.|.|+|.. +. ++. ..+.+.++..+.+..++.+.
T Consensus 305 ---p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~-sas---~A~~l~G~v~ip~~~~G~ll 361 (539)
T PF03137_consen 305 ---PVFMCLILAGVFESFIVSGFATFLPKYLESQFGL-SAS---QASLLTGIVSIPGAALGILL 361 (539)
T ss_dssp ----------------------------------------------------------------
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHH---HHHHHHhhhhcchhheehhe
Confidence 5566666666666677788999999999875 76 333 33334444444444444433
No 112
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.53 E-value=3.7e-12 Score=120.94 Aligned_cols=150 Identities=20% Similarity=0.287 Sum_probs=117.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHH----hhchHHHHHHH-HHHHHHHHHHHHHhchHH---------------
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGRRRELILA-ALLYLVGALVTALAPDFI--------------- 148 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~Grk~~l~~~-~~~~~~~~~~~~~~~~~~--------------- 148 (381)
+|.+....+++..+..+...+.+++.|+++| |+|||+.++++ .....++.++.+++++++
T Consensus 34 lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~ 113 (477)
T TIGR01301 34 LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRA 113 (477)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHH
Confidence 7999999999999999999999999999999 59999998875 666666666776765542
Q ss_pred --HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccc--hhHHhHHHHHHHHHHHHHHHHHHHhh--ccc------------
Q 016882 149 --IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR--GQLISLKEFFIVLGMVGGYGIGSLLV--DLV------------ 210 (381)
Q Consensus 149 --~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~--~~~------------ 210 (381)
..+++-.+..++.....+...++++|.+|+++| +.+.++.+...++|..+|+.+++... +..
T Consensus 114 i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (477)
T TIGR01301 114 IIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSC 193 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccccc
Confidence 223333445567787888889999999998865 57899999999999999999998651 110
Q ss_pred chhHHHHHhhHHHHHHHHH-HHhhcccch
Q 016882 211 AGWRYMYGASTPLAVIMGM-GMWWLPASP 238 (381)
Q Consensus 211 ~~w~~~f~i~~~~~~~~~~-~~~~~~~~~ 238 (381)
.+.|+.|++.+++.+++.+ ..++.+|.|
T Consensus 194 ~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 194 ANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred chHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 1678999998888777554 445578865
No 113
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.53 E-value=4.3e-14 Score=136.98 Aligned_cols=275 Identities=17% Similarity=0.242 Sum_probs=199.1
Q ss_pred HHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 016882 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (381)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~ 132 (381)
.+++.++..+..++..+.+...+.++.+. |+++.++.|++.+.+-++..+...+..++..|.-|.+.+-+|.+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErR-------F~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~ 170 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERR-------FKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLV 170 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhh-------cCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechh
Confidence 34566666777788888888888888887 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh--------------------c---------------------------h----HH-HHHHHHHHHHHH
Q 016882 133 LYLVGALVTALA--------------------P---------------------------D----FI-IMVVGRFVFGIG 160 (381)
Q Consensus 133 ~~~~~~~~~~~~--------------------~---------------------------~----~~-~~~~~r~l~G~~ 160 (381)
+++++.+++++- + + ++ .+++++++.|+|
T Consensus 171 ~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG 250 (735)
T KOG3626|consen 171 LMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIG 250 (735)
T ss_pred HHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcC
Confidence 999999988761 0 0 22 567899999999
Q ss_pred HhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc------------------ccchhHHHHHhhHH
Q 016882 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------------------LVAGWRYMYGASTP 222 (381)
Q Consensus 161 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------------------~~~~w~~~f~i~~~ 222 (381)
....++...+|+-|...+++-...+|+......+|.++|-++++.+.+ +.+-|...|++.+.
T Consensus 251 ~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~ 330 (735)
T KOG3626|consen 251 ATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGA 330 (735)
T ss_pred CCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998874 22468888999999
Q ss_pred HHHHHHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCC---CCChhhHHHHHHhhhhccccccccchh
Q 016882 223 LAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIG---DSAPTEVDEILTELSYVGEDKEVSLRE 299 (381)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (381)
+.++..+.++++|+..+...+. ...++.+....+ .+++....+. -++-+...+.
T Consensus 331 ~~~~~a~p~f~fPk~lp~~~~~----------------~~~~~~~~~k~~~~~~~~~~~~~~~-------ikdfp~s~~~ 387 (735)
T KOG3626|consen 331 LLLFSAVPLFFFPKELPKSQKR----------------KRARDLHVLKTESGGAKSDKTFGKK-------IKDFPKSIKR 387 (735)
T ss_pred HHHHHHHHHHhCcccCcccccc----------------chhhhhcccccccccccCCcchhhh-------HHHHHHHHHH
Confidence 9998888888888764311100 000000000000 0000000000 0111344556
Q ss_pred hccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHc-CCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 300 VFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
++++ +++++..+........+..+..|+|.|++.. |. + +..++.+.+...+.+.-+|+
T Consensus 388 ll~N----~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~-s---as~An~l~G~i~vp~~~~Gi 446 (735)
T KOG3626|consen 388 LLSN----PIFMLVVLASVIESLAITGYITFLPKYLETQFGI-S---ASLANILTGSIGVPAAAVGI 446 (735)
T ss_pred HhcC----chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCC-C---HHHHHHHhhhhhhhhhhhhh
Confidence 6666 5566666666667777888999999999875 77 3 33444444444444444444
No 114
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.52 E-value=3.1e-13 Score=128.17 Aligned_cols=148 Identities=13% Similarity=0.223 Sum_probs=125.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc----hHHHHHHHHHHHHHHHhhHhH
Q 016882 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP----DFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~r~l~G~~~g~~~~ 166 (381)
.+.+..+.+.++..++..++.++.|+++||+|||+++.++.++.+++..+..... +++.+++.+++.|++.+...+
T Consensus 248 ~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~ 327 (418)
T TIGR00889 248 FVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNI 327 (418)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3457789999999999999999999999999999999999999888877666632 246677889999999998888
Q ss_pred HHHHHHHhhCCcccchhHHhHHH-HHHHHHHHHHHHHHHHhhcccc-----hhHHHHHhhHHHHHHHHH-HHhhcccch
Q 016882 167 AAPMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVA-----GWRYMYGASTPLAVIMGM-GMWWLPASP 238 (381)
Q Consensus 167 ~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~-----~w~~~f~i~~~~~~~~~~-~~~~~~~~~ 238 (381)
....++.|++|+++|+++.++.+ ..+++|..+||.+++.+.+..+ ||+..|.+.+++.+++.+ ..+++||+.
T Consensus 328 ~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 328 SGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 98999999999999999999997 6789999999999999998642 699999998888777544 445577663
No 115
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.51 E-value=4.7e-12 Score=115.30 Aligned_cols=269 Identities=16% Similarity=0.113 Sum_probs=181.1
Q ss_pred chhHHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchH
Q 016882 45 YSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (381)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk 124 (381)
+-.+++|..++..++.++.+++.-...++.......- +| +.+..-|+..+|.+.+....+++.|+.||+|-|
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~-------Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR 109 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSF-------YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR 109 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHH-------hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchH
Confidence 3445566777888888888877766666555555443 67 788899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc------hHH--HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHH
Q 016882 125 RELILAALLYLVGALVTALAP------DFI--IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGM 196 (381)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~~~~------~~~--~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 196 (381)
..++++..+.+++..+-..+. .++ ....++.+.+..+-.....-.-...-|||+++|..+..+-.++..+|.
T Consensus 110 ~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGv 189 (480)
T KOG2563|consen 110 TALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGV 189 (480)
T ss_pred HHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHH
Confidence 999999999999998877652 344 777888888888776666656666779999999999999999999999
Q ss_pred HHHHHHHHHhhccc-----chhHH--HHHhhHHHHHHHHHHH-hhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhC
Q 016882 197 VGGYGIGSLLVDLV-----AGWRY--MYGASTPLAVIMGMGM-WWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRG 268 (381)
Q Consensus 197 ~~~~~~~~~l~~~~-----~~w~~--~f~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (381)
+++.++...+.++. ..|.. .|+....+..+.+++. +..++.|+..- ..+.+
T Consensus 190 avg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPp--------------s~s~~------- 248 (480)
T KOG2563|consen 190 AVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPP--------------SASQA------- 248 (480)
T ss_pred HHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--------------chhHh-------
Confidence 99999988888543 24554 3443444433333322 22344332100 00000
Q ss_pred CCCCCCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHH
Q 016882 269 QSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATR 348 (381)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 348 (381)
. ..+.+-..+.+++++++.+-.+.+++.. .+..++...+.+...+.-.|+ +...++.
T Consensus 249 ------------~------~~~~~f~~si~~~~~n~~F~il~~~ygi----~~g~F~~l~~~l~~~l~~sgY-~~~~aG~ 305 (480)
T KOG2563|consen 249 ------------A------LQDASFPKSIKSCFKNRQFIILAICYGI----GLGLFNSLSTLLNLALCPSGY-EGVFAGY 305 (480)
T ss_pred ------------h------hhcCcHHHHHHHHHcCccHHHHHHHHhh----hHHHHHHHHHHhhhccccccC-Cccccch
Confidence 0 0011234556777777543333332222 233344454444444455678 5578888
Q ss_pred HHHHHHHHHHHHhHHHH
Q 016882 349 VSILLGLFKVGSCTLFF 365 (381)
Q Consensus 349 ~~~~~~~~~~i~~~~~~ 365 (381)
+..+..+.++++.++..
T Consensus 306 ig~l~iv~Gmlga~~~g 322 (480)
T KOG2563|consen 306 IGALMIVAGMLGALASG 322 (480)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 88888888888887754
No 116
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.50 E-value=1.6e-12 Score=121.87 Aligned_cols=142 Identities=13% Similarity=0.043 Sum_probs=128.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|.+..+.|++.++..++.+++.++.+++.||+|+|+.+.++.++.++..++.+++++.+.+++.+.+.|++.+...+..
T Consensus 235 ~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~ 314 (382)
T TIGR00902 235 AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAA 314 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCcccchhHHhHHH-HHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 169 PMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
..++.+. |+++|++..++++ ...++|.++++.++|.+.+.. |+ ..|++.+++.++.+++.+.
T Consensus 315 ~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-g~-~~~~~~~~~~~~~~~~~~~ 377 (382)
T TIGR00902 315 MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-GA-GTFVFMAIIAAAAFFLIPK 377 (382)
T ss_pred HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHHHHHHHHh
Confidence 9999998 9999999999986 578899999999999999988 76 6677777777665544443
No 117
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.50 E-value=5.3e-13 Score=127.99 Aligned_cols=142 Identities=18% Similarity=0.192 Sum_probs=120.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh--hchHHHHHH--HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI--LGRRRELIL--AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~Grk~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 164 (381)
+|.+..+.+++.++..++..+++++.|+++|| +++|+...+ +.++.+++.+++...++++.+++.+++.|++.+..
T Consensus 271 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~ 350 (455)
T TIGR00892 271 KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSV 350 (455)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchH
Confidence 68899999999999999999999999999997 334433333 34444455556667788998999999999999999
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHH
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~ 230 (381)
.+...+++.|.+|++++++.+++++....+|..++|.+++.+.+..++|++.|++.+++.++..+.
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 351 GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987757999999998887665443
No 118
>PRK12382 putative transporter; Provisional
Probab=99.49 E-value=1.4e-12 Score=122.74 Aligned_cols=137 Identities=19% Similarity=0.191 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhh
Q 016882 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (381)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~ 175 (381)
.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.++.|++.+...+.....+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45666778888899999999999999999999999988888888888888888888899999999998888888889999
Q ss_pred CCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
+|+++|++..++.+....+|..++|.+.+.+.+.. ||++.|++.+++.++..+..++
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999987 9999999999888776555443
No 119
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.48 E-value=1.3e-12 Score=125.98 Aligned_cols=144 Identities=21% Similarity=0.111 Sum_probs=112.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH--HHHHhchHHHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL--VTALAPDFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+|++..+.++..++..++..++.+++|+++||+|||+.+.....+..++.. +....++.+.+.+++++.|++......
T Consensus 289 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 368 (467)
T PRK09556 289 LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQL 368 (467)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHH
Confidence 799999999999999999999999999999999999887665444443322 222345666677788888865444444
Q ss_pred HHHHHHHhhCCcccchhHHhHHHHHHHH-HHHHHHHHHHHhhc------------ccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 167 AAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVD------------LVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 167 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~------------~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
.......|.+|++.||++.|+.+....+ |..++|.+.|.+.+ .. +|+..|++.+++.++.++..++
T Consensus 369 ~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 369 LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT-GWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccccc-ChHHHHHHHHHHHHHHHHHHHH
Confidence 4446677999999999999999988886 77999999999998 44 7999999887777776555554
No 120
>PRK09952 shikimate transporter; Provisional
Probab=99.46 E-value=3.5e-12 Score=121.84 Aligned_cols=149 Identities=17% Similarity=0.038 Sum_probs=115.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH---h-chHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL---A-PDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~---~-~~~~~~~~~r~l~G~~~g~~ 164 (381)
+|.+......+..+..+...++.++.|+++||+|||+.+..+.++..++.+.... . ++.+.++++.++.|++.+..
T Consensus 281 ~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (438)
T PRK09952 281 LGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMV 360 (438)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 6777776666666677777889999999999999999988887766554433322 1 23445555667778888888
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHH-HHHHHHHHHHHHHHHHhhccc-chhHHHHHhhHHHHHHHHHHHhhcccc
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLV-AGWRYMYGASTPLAVIMGMGMWWLPAS 237 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~-~~w~~~f~i~~~~~~~~~~~~~~~~~~ 237 (381)
.+...+++.|.+|.+.|+++.++.+ .+..+|+.++|.+.+++.+.. ++|+..+.+.+++.++..+..+.++|+
T Consensus 361 ~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 361 VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 8888999999999999999999954 455689999999999998743 368998888888888777776667664
No 121
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.45 E-value=1.9e-12 Score=121.20 Aligned_cols=143 Identities=21% Similarity=0.147 Sum_probs=106.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH--HHH------HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR--ELI------LAALLYLVGALVTALAPDFIIMVVGRFVFGIG 160 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~--~l~------~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 160 (381)
+|.+..+.+++.+...++..++.++.|++.||+|||+ ... ++.++..+........++.+.......+.+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (399)
T TIGR00893 246 RGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFG 325 (399)
T ss_pred hcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhc
Confidence 6888999999999999999999999999999999996 111 11111111111111122444444444444444
Q ss_pred HhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHh
Q 016882 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 161 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~ 232 (381)
.+ ..+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..++|+..|++.+++.++..+..+
T Consensus 326 ~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 326 LG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 44 788889999999999999999999999999999999999999999873399999988888777655443
No 122
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.45 E-value=1.3e-12 Score=123.50 Aligned_cols=138 Identities=18% Similarity=0.272 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHh
Q 016882 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (381)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 174 (381)
..+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+...+++.+
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVY 338 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHH
Confidence 35666777888889999999999999999999999988888877777777888888899999999999999999999999
Q ss_pred hCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 175 TAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 175 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
..|+++|++.+++.+....+|..+||.+++.+.+.. ||++.|++.+++.++..+..++
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-GFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887 8999999999888876655543
No 123
>PRK03699 putative transporter; Provisional
Probab=99.44 E-value=3.5e-12 Score=120.18 Aligned_cols=146 Identities=14% Similarity=0.056 Sum_probs=124.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|++..+.+++.+.+.++..++.++.|+++||++||+.+.....+..+...+....++.+.+.+..++.|++.+...+..
T Consensus 236 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 315 (394)
T PRK03699 236 FGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTI 315 (394)
T ss_pred cCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999988877777766666667777777777888999888888888
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhccc
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 236 (381)
.++..+..| ++++...+.......+|..++|.+.+.+.+.. ||+..+++.+++.+++.+..+..++
T Consensus 316 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 316 ITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-GLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-CchhhhhhhHHHHHHHHHHHHHHHH
Confidence 888888776 45678888888889999999999999999987 8999999888888777665555544
No 124
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.43 E-value=3.3e-13 Score=115.17 Aligned_cols=154 Identities=19% Similarity=0.222 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHH
Q 016882 49 AAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRREL 127 (381)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grk~~l 127 (381)
++...++..|+..+-.++.....+....+...+ .+++..+..++.+++..-..+.++++|++.|| +|-|..-
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d-------~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gt 113 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLD-------SNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGT 113 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcc-------cccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHH
Confidence 344555677777777788877777777777776 68888899999999999999999999999996 6877776
Q ss_pred HHHHHHHHHHHHHHHH---hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHH
Q 016882 128 ILAALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (381)
Q Consensus 128 ~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 204 (381)
++-..+..++.++++. .+.+|.+..+|++.|+|.-..-++.+.|..-|+..|+.+.++|+......+|+.+--.+.+
T Consensus 114 ii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~ 193 (459)
T KOG4686|consen 114 IILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMP 193 (459)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecH
Confidence 6666666777777654 5789999999999999988888888999999999999999999999999999988777777
Q ss_pred Hhhcc
Q 016882 205 LLVDL 209 (381)
Q Consensus 205 ~l~~~ 209 (381)
++.+.
T Consensus 194 ~ly~~ 198 (459)
T KOG4686|consen 194 FLYDT 198 (459)
T ss_pred HHHHH
Confidence 77654
No 125
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.43 E-value=4e-12 Score=121.94 Aligned_cols=144 Identities=17% Similarity=0.149 Sum_probs=102.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHH-HHHHHHHHHHHHHHHH--hchHHHHHHHHHHHHHHHhh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRRREL-ILAALLYLVGALVTAL--APDFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Grk~~l-~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~g~ 163 (381)
.|++..+.+++.+++.++..++.++.|+++||+ |||+.. .....+..++.+.... ..+.+...++.++.|.+...
T Consensus 284 ~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 363 (452)
T PRK11273 284 KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYG 363 (452)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHh
Confidence 578888999999999999999999999999999 555432 2222333333322222 23444455555555554433
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHH-HHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV-GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
.......+..|.+|++.||++.|+.+....+|.. .+|.+.+.+.+.. ||+..|++.++.+++.++....
T Consensus 364 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 364 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-cchHHHHHHHHHHHHHHHHHHH
Confidence 3334455678999999999999999888888765 4799999999987 8999999888887776555544
No 126
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.43 E-value=7.5e-12 Score=117.35 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=118.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
.|.+..+.+++.+...++..+++++.|++.||+|+|+.+..+.++..++.+... . ......+.++.|++.+...|..
T Consensus 230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~ 306 (381)
T PRK03633 230 QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVA 306 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHH
Confidence 588888999999999999999999999999999999999888887777655443 2 2334456777888777788888
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
.+.+.|..|+++++...+..+..+.+|..++|.+++++.++. +|++.|++.+.+.++..+..++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 307 MAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-SDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHHHHHHHh
Confidence 999999999888888888888899999999999999999987 8999999988887766555444
No 127
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=2.8e-12 Score=120.19 Aligned_cols=137 Identities=23% Similarity=0.162 Sum_probs=111.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH--HHHHH--hchHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA--LVTAL--APDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~--~~~~~--~~~~~~~~~~r~l~G~~~g~~ 164 (381)
+|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. +.... .++.+.+.+..++.|++.+..
T Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (394)
T TIGR00883 250 LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMY 329 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Confidence 68888999999999999999999999999999999998776554444333 22222 246677777888899998889
Q ss_pred hHHHHHHHHhhCCcccchhHHhHH-HHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHH
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLK-EFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~ 225 (381)
.+...+++.|.+|+++|+++.++. +....+|..++|.+++.+.+..+.|++.++..++..+
T Consensus 330 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 330 TGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred hhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 999999999999999999999984 5667789999999999999987448887776665544
No 128
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.42 E-value=3.4e-12 Score=120.34 Aligned_cols=132 Identities=21% Similarity=0.199 Sum_probs=110.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH-HHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL-VTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..+..+ +....++.+.+.++.++.|++.+...+.
T Consensus 269 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (405)
T TIGR00891 269 LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGI 348 (405)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhh
Confidence 688999999999999999999999999999999999999888776543333 3333456667777777788777777788
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhh
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAS 220 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~ 220 (381)
.+.++.|.+|+++|++++|+.+....+|..++|++.+.+.+..+.|+..+...
T Consensus 349 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 349 LPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 88999999999999999999999999999999999999999873487766543
No 129
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.40 E-value=1.2e-11 Score=116.58 Aligned_cols=149 Identities=18% Similarity=0.184 Sum_probs=119.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+|.+..+.+...+++.++..++.++.|++.||+|||+.+..+..+..++..+....+ +...+ .-++.|++.+...+.
T Consensus 235 ~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~ 312 (393)
T PRK09705 235 IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPL 312 (393)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHH
Confidence 688999999999999999999999999999999999999888877777666554333 22222 234668888877787
Q ss_pred HHHHHHhhCC-cccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHH-Hhhcccchh
Q 016882 168 APMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG-MWWLPASPR 239 (381)
Q Consensus 168 ~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~-~~~~~~~~~ 239 (381)
......+..+ +++|++..++.+....++..++|.+.+++.+..++|+..|++.++.+++..+. ..+.||++.
T Consensus 313 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 313 CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 7777777774 67899999999999999999999999999998767899898888877765444 455677654
No 130
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.40 E-value=7.2e-12 Score=120.35 Aligned_cols=172 Identities=13% Similarity=-0.019 Sum_probs=126.6
Q ss_pred HHHHHHhhhccccccccc-ccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----hHHHHHH
Q 016882 56 FPALGGLLYGYDIGSTSC-ATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELIL 129 (381)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-----rk~~l~~ 129 (381)
+....++..|+. ..... ..+.+.++ +|++..+.+.+.++..+.+.+-.+ +|+++||++ ||+.+++
T Consensus 30 ~~~~~y~~qGl~-~l~~~~~~~~l~~~-------lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~ 100 (468)
T TIGR00788 30 IGLQVLFVKGIA-GLMRLPLSPMLTDD-------LGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVL 100 (468)
T ss_pred HHHHHHHHhhHH-HHhhhhhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHH
Confidence 334445666776 44443 44444444 799999999999999999999665 999999998 7777777
Q ss_pred HHHHHH-HHHHHHHHhchHH-HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhH---HHHHHHHHHHHHHHHHH
Q 016882 130 AALLYL-VGALVTALAPDFI-IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISL---KEFFIVLGMVGGYGIGS 204 (381)
Q Consensus 130 ~~~~~~-~~~~~~~~~~~~~-~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~g~~~~~~~~~ 204 (381)
+.++.. ++....+..++.. ...+..++.+++.+...+..-.+..|..+ +++....+. ......+|..+++.+++
T Consensus 101 ~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G 179 (468)
T TIGR00788 101 SGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGG 179 (468)
T ss_pred HHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHH
Confidence 776663 3333333334433 34447889999999999999999999998 555544333 33444589999999999
Q ss_pred HhhcccchhHHHHHhhHHHHHHHHHHHhhcccch
Q 016882 205 LLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 205 ~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 238 (381)
.+.+.. +|+..|++.+++.++..+..++++|++
T Consensus 180 ~l~~~~-~~~~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 180 PLLDKT-LTRILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred HHHHhc-CcchHHHHHHHHHHHHHHHHHhccccc
Confidence 999887 999999999888887766667778753
No 131
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.40 E-value=1.8e-11 Score=116.88 Aligned_cols=149 Identities=16% Similarity=0.148 Sum_probs=136.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHHHHHHHHHHH--------hchHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTAL--------APDFIIMVVGRFVFG 158 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk--~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~r~l~G 158 (381)
+|++..+...+..+..+..++|++++|++.||+|.| +++.++++++.+..+...+ .++.+.+++..++.|
T Consensus 312 lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G 391 (477)
T PF11700_consen 312 LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIG 391 (477)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999 8999988888666665555 678899999999999
Q ss_pred HHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccc
Q 016882 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (381)
Q Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 237 (381)
++.|..++..-++.+|+.|+++.+..+|++.......+.+||++.+.+.+..++-|+.++...++.++.++++++++..
T Consensus 392 ~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 392 LFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 9999999999999999999999999999999999999999999999999988779999999998888888877776653
No 132
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.39 E-value=5.1e-12 Score=122.71 Aligned_cols=137 Identities=13% Similarity=0.049 Sum_probs=109.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--PDFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+|.+..+.+++.+...++..++.++.|+++||+|||+.+.++.++..+..++.... .+.+.+.+..++.+....+..+
T Consensus 306 ~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (496)
T PRK03893 306 LGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISG 385 (496)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccch
Confidence 78999999999999999999999999999999999999888877666655444332 3444444555554444334456
Q ss_pred HHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 167 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
..+.++.|.+|+++|++.+++.+....+|..++|.+++.+.+.. ||+..+.+.+....+
T Consensus 386 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 386 LLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL-DLGTALASLSFSLTF 444 (496)
T ss_pred hhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-ChHHHHHHHHHHHHH
Confidence 77788999999999999999999999999999999999999987 898887665554443
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.39 E-value=3.2e-11 Score=113.51 Aligned_cols=142 Identities=20% Similarity=0.089 Sum_probs=118.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH-HHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA-LVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+|.+..+.+++.+...++..+++++.|+++||+|||+.+. +..+..++. .+....++.+.++++.++.|++.+...+.
T Consensus 236 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 314 (390)
T PRK03545 236 AGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLA 314 (390)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHH
Confidence 5888899999999999999999999999999999887544 444444433 33445677888888999999988777777
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
....+.+..| ++|+++++++.....+|..+|+.+++.+.++. |++..|++.+++.++.++...+
T Consensus 315 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 315 MQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL-GLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHH
Confidence 7888888877 68899999999999999999999999999997 9999999999888876655544
No 134
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.38 E-value=7.5e-12 Score=120.45 Aligned_cols=148 Identities=15% Similarity=0.029 Sum_probs=115.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-----c------hHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----P------DFIIMVVGRFVF 157 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-----~------~~~~~~~~r~l~ 157 (381)
+|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.++..+. + +...+....++.
T Consensus 314 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (481)
T TIGR00879 314 AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFI 393 (481)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHH
Confidence 68888888999999999999999999999999999999999888877777666521 1 222223333333
Q ss_pred HHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHh-hccc
Q 016882 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW-WLPA 236 (381)
Q Consensus 158 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~-~~~~ 236 (381)
+.......+....++.|.+|+++|++++++.+....+|.++++.+.+.+.+.. +|++.|++.++++++.++..+ +.||
T Consensus 394 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 394 AFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGGVFIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred HHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccceehhHHHHHHHHHHHHheeccc
Confidence 32222334666777899999999999999999999999999999999998876 899999999888877665554 4565
Q ss_pred c
Q 016882 237 S 237 (381)
Q Consensus 237 ~ 237 (381)
+
T Consensus 473 ~ 473 (481)
T TIGR00879 473 T 473 (481)
T ss_pred C
Confidence 4
No 135
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.38 E-value=2.4e-11 Score=115.37 Aligned_cols=149 Identities=18% Similarity=0.131 Sum_probs=128.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|.+..+.+++.+...++..++.++.+++.||.++++.+..+.++..++.++..+.++.+.+.++.++.|++.+...+..
T Consensus 254 ~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (417)
T PRK10489 254 WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQ 333 (417)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 58888999999999999999999999999999888888888888888888777788888888888999999988888888
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH-HHHHHhhcccch
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASP 238 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~-~~~~~~~~~~~~ 238 (381)
.+++.|..|++.||++++++.....+|..+|+.+.+.+.+.. |++..+++.+++.++ .++.....|+.+
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM-TPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 889999999999999999999999999999999999999987 888888777766555 444545556543
No 136
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.37 E-value=2.7e-11 Score=114.49 Aligned_cols=151 Identities=13% Similarity=0.084 Sum_probs=117.7
Q ss_pred ccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHH-----hchH
Q 016882 74 ATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI-LAALLYLVGALVTAL-----APDF 147 (381)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~-~~~~~~~~~~~~~~~-----~~~~ 147 (381)
..|.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.... .++.
T Consensus 244 ~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~ 316 (402)
T TIGR00897 244 FLPMFVAE-------LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSF 316 (402)
T ss_pred HHHHHHHH-------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcH
Confidence 45555554 6889999999999999999999999999999999988764 333333333333222 2456
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHH
Q 016882 148 IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (381)
Q Consensus 148 ~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~ 227 (381)
+..+++.++.|++.+...+. ...+.|..| ++|+++.|+.+....+|..++|.+++.+.+.. ||+..|++.+++.++.
T Consensus 317 ~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~-g~~~~~~~~a~~~~i~ 393 (402)
T TIGR00897 317 AVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF-GAIGVVWIFAALYVVS 393 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH
Confidence 77778888899888766554 456677655 68999999999999999999999999999987 8999999999888776
Q ss_pred HHHHhhc
Q 016882 228 GMGMWWL 234 (381)
Q Consensus 228 ~~~~~~~ 234 (381)
.+..+|+
T Consensus 394 ~~~~~~~ 400 (402)
T TIGR00897 394 AFLTAFI 400 (402)
T ss_pred HHHHHHh
Confidence 6666654
No 137
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.37 E-value=2.5e-11 Score=117.31 Aligned_cols=149 Identities=15% Similarity=0.103 Sum_probs=111.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc--h-HH-HHHHHHHHHHHHHhh-
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--D-FI-IMVVGRFVFGIGIGL- 163 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~--~-~~-~~~~~r~l~G~~~g~- 163 (381)
+|.+.....+......++..++.++.+++.||+|||+.++.+.++.+++.++++... + .+ ....+.++.+++.+.
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (479)
T PRK10077 301 LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMS 380 (479)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhcc
Confidence 677777777777788889999999999999999999999999998888877765431 1 11 223344444544443
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhh------cccchhHHHHHhhHHHHHHHHHHHh-hccc
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV------DLVAGWRYMYGASTPLAVIMGMGMW-WLPA 236 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------~~~~~w~~~f~i~~~~~~~~~~~~~-~~~~ 236 (381)
..+....++.|.+|+++|+.+.++.+....+|..+++.+.+.+. +.. +|++.|++.++++++.++..+ +.||
T Consensus 381 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 381 WGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF-HNGFSYWIYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred ccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc-cCccHHHHHHHHHHHHHHHHHhcccc
Confidence 23667899999999999999999999999999988876665443 344 788889888877776555444 4566
Q ss_pred ch
Q 016882 237 SP 238 (381)
Q Consensus 237 ~~ 238 (381)
++
T Consensus 460 ~~ 461 (479)
T PRK10077 460 TK 461 (479)
T ss_pred CC
Confidence 53
No 138
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.36 E-value=1.4e-11 Score=116.26 Aligned_cols=141 Identities=13% Similarity=0.155 Sum_probs=122.9
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (381)
+.+....+.+.++..+...++.+..|++.||+|||+.+.++.++.++...+....++.+.+++++++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999999999999999999999999999999999998888888777888999889999999999887777777
Q ss_pred HHHHhhCCcccchhHHhH-HHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHH
Q 016882 170 MYIAETAPTPMRGQLISL-KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 170 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~ 231 (381)
.+..+..+++.+++..+. .+....+|..+++.+++++.+.. ||+..|.+.+++.++..+..
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-ccHHHHHHHHHHHHHHHHHH
Confidence 888888998988887776 67899999999999999999987 99999999888877654443
No 139
>PRK09669 putative symporter YagG; Provisional
Probab=99.35 E-value=2.3e-11 Score=116.48 Aligned_cols=148 Identities=19% Similarity=0.125 Sum_probs=110.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hch-HHHHHHHHHHHHHHHHHHHHhch------HHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGR-RRELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Gr-k~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~ 157 (381)
+|++..+.|.+.++..+..++..|+.|+++|| +|| |+.++.+.+..+++..+....++ ++.+++...+.
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~ 119 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILL 119 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 79999999999999999999999999999998 777 56666677777776655544432 45566667777
Q ss_pred HHHHhhHhHHHHHHHHhhC-CcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc------cchhHHHHHhhHHHHHHHHHH
Q 016882 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL------VAGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 158 G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~~~w~~~f~i~~~~~~~~~~~ 230 (381)
+.+.........++.+|+. ++++|++..++...+..+|..+++.+...+... ..+|+..+.+.+++.++..+.
T Consensus 120 ~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 120 SLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 7777777777788999988 568899988888888888877776655444321 137888888888877665544
Q ss_pred Hh-hccc
Q 016882 231 MW-WLPA 236 (381)
Q Consensus 231 ~~-~~~~ 236 (381)
.+ ..+|
T Consensus 200 ~~~~~~e 206 (444)
T PRK09669 200 CFFMTKE 206 (444)
T ss_pred HhCCeEE
Confidence 33 3444
No 140
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.35 E-value=7e-11 Score=110.84 Aligned_cols=138 Identities=15% Similarity=0.057 Sum_probs=118.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
.|.+..+.+.+.++..++..+..++.|++.||+|+|+.+.++.++.+++.++.+..++.+.+++..++.|++.+...+..
T Consensus 235 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 314 (382)
T PRK11128 235 AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAA 314 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999988888888888999999999999999999988998
Q ss_pred HHHHHhhCCcccchhHHhHHH-HHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH
Q 016882 169 PMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
..++.+. +++++++..++.+ ....+|..+|+.++|.+.+.. |+ ..|++.+++.++.++
T Consensus 315 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~-g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 315 MRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL-GA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHHHHH
Confidence 9988887 5666788888875 566788899999999999987 66 456666665554433
No 141
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.35 E-value=7.6e-11 Score=114.10 Aligned_cols=147 Identities=16% Similarity=0.166 Sum_probs=118.4
Q ss_pred ccCChhHHHHHHH-HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH---HHh-chHHHHHHHHHHHHHHHhh
Q 016882 89 YDLSSVEIGLITS-GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT---ALA-PDFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 89 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~r~l~G~~~g~ 163 (381)
+|.+..+.+++.. ...++.+++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.-++..++.|.
T Consensus 253 ~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~ 332 (491)
T PRK11010 253 VGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGM 332 (491)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 6999999999974 6678999999999999999999998877666555544332 232 3555555566666666666
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhccc
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 236 (381)
..+...++..++.+++.+++..++.+....+|..+++++.+.+.+.. ||+..|.+.++++++.++...++++
T Consensus 333 ~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 333 GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66777888999999999999999999999999999999999999987 9999999999998887776666554
No 142
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.34 E-value=2.3e-10 Score=107.18 Aligned_cols=167 Identities=19% Similarity=0.234 Sum_probs=114.8
Q ss_pred hhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHH
Q 016882 63 LYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG-RRRELILAALLYLVGALVT 141 (381)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-rk~~l~~~~~~~~~~~~~~ 141 (381)
.+....+...+..+.+.++ .|+|..|+|.+.++..+..+++++++|.++||.+ +|+.+.+..++.++.....
T Consensus 13 ~~f~~~G~~~p~~~~~L~~-------~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 13 LYFFAYGAFLPYLPLYLES-------RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3333444444555666555 6999999999999999999999999999999986 5777777777777777777
Q ss_pred HHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHH-HHHhhccc--chhHHHHH
Q 016882 142 ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGI-GSLLVDLV--AGWRYMYG 218 (381)
Q Consensus 142 ~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~-~~~l~~~~--~~w~~~f~ 218 (381)
...++++.+++..++..+......|...++..+.... ++.-.|-.-...++|-.++... ...+.... .+..+.++
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 7788899898888888888888888888888887752 3333444444445555444332 12222111 13334566
Q ss_pred hhHHHHHHHHHHHhhcccch
Q 016882 219 ASTPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 219 i~~~~~~~~~~~~~~~~~~~ 238 (381)
+.++..++.....+.+|+.|
T Consensus 164 i~~~~~~ll~~~~l~lp~~~ 183 (400)
T PF03825_consen 164 IAAILSLLLAGFALFLPKTP 183 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCc
Confidence 66666655555566678776
No 143
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.33 E-value=2.4e-10 Score=109.11 Aligned_cols=119 Identities=19% Similarity=0.266 Sum_probs=102.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHhhHhHHHHH
Q 016882 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHAAPM 170 (381)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~~~~~~ 170 (381)
+..+.+++.++..++..++.++++++.||+|+|+.+.++.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888899999999999999999999999999988888877776665 46677778888999999999999999
Q ss_pred HHHhhCC-------cccchhHHhHHHHHHHHHHHHHHHHHHHhhccc
Q 016882 171 YIAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (381)
Q Consensus 171 ~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 210 (381)
+++|..+ ++++|...++.+....+|..+++.+.+.+.+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9998865 567899999999999999999999999988654
No 144
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.32 E-value=4.9e-11 Score=115.09 Aligned_cols=149 Identities=13% Similarity=0.098 Sum_probs=109.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHH----hhch-HHHHHHHHHHHHHHHHHHHHhc------hHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGR-RRELILAALLYLVGALVTALAP------DFIIMVVGRFVF 157 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~Gr-k~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~r~l~ 157 (381)
+|++...+|.+..+.-+..++..|+.|.++| |+|| |+.++++.+..+++..++...+ .+..+++...+.
T Consensus 37 ~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~ 116 (473)
T PRK10429 37 VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILW 116 (473)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999 6698 6677778777777766554432 134455666777
Q ss_pred HHHHhhHhHHHHHHHHhhC-CcccchhHHhHHHHHHHHHHHHHHHHHHHhhc------ccchhHHHHHhhHHHHHHHHHH
Q 016882 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------LVAGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 158 G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~~~w~~~f~i~~~~~~~~~~~ 230 (381)
+++.........++..|+. ++++|.+..++-..+..+|..+.+.+...+.+ ...+|+...++.+++.+++.+.
T Consensus 117 ~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 117 GMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred HHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 8888888888899999999 68999999998777777776666555444321 1125777777777776654443
Q ss_pred Hh-hcccc
Q 016882 231 MW-WLPAS 237 (381)
Q Consensus 231 ~~-~~~~~ 237 (381)
.+ ..+|.
T Consensus 197 ~~~~~~e~ 204 (473)
T PRK10429 197 TLRNVHEV 204 (473)
T ss_pred HHcCceec
Confidence 33 35553
No 145
>TIGR00895 2A0115 benzoate transport.
Probab=99.32 E-value=1.8e-11 Score=114.92 Aligned_cols=118 Identities=20% Similarity=0.112 Sum_probs=100.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|.+..+.+++.++..++..++.++.|++.||+|||+.+....+....+.++....++.+.+++..++.|++.+...+..
T Consensus 280 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 359 (398)
T TIGR00895 280 LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGL 359 (398)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999999999999955544444333333333335677778888899999999999999
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHh
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 206 (381)
.+++.|.+|+++|+++.++......+|..++|.+++.+
T Consensus 360 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 360 YALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999875
No 146
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.31 E-value=2.3e-11 Score=118.36 Aligned_cols=139 Identities=13% Similarity=-0.002 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhch----HHHHHHHHHHHHHHHhhHhHHHHHHHHhhC
Q 016882 101 SGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD----FIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (381)
Q Consensus 101 ~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 176 (381)
.+..++..++.++.+++.||+|||+.++++..+.+++.++..+..+ ...+...-+...++..+..+....+.+|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 3455566778899999999999999998888777776665554321 111111111112222234456677889999
Q ss_pred CcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc---------chhHHHHHhhHHHHHHHHHHHhhcccchh
Q 016882 177 PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV---------AGWRYMYGASTPLAVIMGMGMWWLPASPR 239 (381)
Q Consensus 177 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------~~w~~~f~i~~~~~~~~~~~~~~~~~~~~ 239 (381)
|.+.|+++.++.+....+|.++++.+.+.+.+.. .++...|++.+++.++..+..+++||+++
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 9999999999999999999999999999888732 14566778777777776666667898754
No 147
>PRK11462 putative transporter; Provisional
Probab=99.31 E-value=3.4e-10 Score=108.63 Aligned_cols=144 Identities=14% Similarity=0.052 Sum_probs=112.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hchH-HHHHHHHHHHHHHHHHHHHhch------HHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRR-RELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grk-~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~ 157 (381)
+|+++..+|.+..+.-+.-++.-|+.|.++|| +||| +.++++.+..+++..++...++ ...+.+...+.
T Consensus 40 ~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~ 119 (460)
T PRK11462 40 FGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLL 119 (460)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 79999999999999999999999999999996 6875 5555677777777766654442 34466677778
Q ss_pred HHHHhhHhHHHHHHHHhhCC-cccchhHHhHHHHHHHHHHHHHHHHHHHhhccc------chhHHHHHhhHHHHHHHHHH
Q 016882 158 GIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV------AGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 158 G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------~~w~~~f~i~~~~~~~~~~~ 230 (381)
.++.........++.+|+.+ +++|++..++...+..+|..+++.+...+.+.. .+|+....+.+++.+++.++
T Consensus 120 ~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i 199 (460)
T PRK11462 120 TLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAF 199 (460)
T ss_pred HHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999987 799999999999999998888877766655332 26888777777776665544
Q ss_pred Hh
Q 016882 231 MW 232 (381)
Q Consensus 231 ~~ 232 (381)
.+
T Consensus 200 ~~ 201 (460)
T PRK11462 200 CF 201 (460)
T ss_pred HH
Confidence 43
No 148
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.30 E-value=1.1e-10 Score=108.11 Aligned_cols=146 Identities=21% Similarity=0.185 Sum_probs=132.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHhhHh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAM 165 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grk~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~ 165 (381)
+|++++++.-+.+.|..-.-+..+++||++||+ |+|++++.|.++..++.++.+... ....++++..+.++|.|..=
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 679999999999999988899999999999996 999999999999999999999884 78889999999999999999
Q ss_pred HHHHHHHHhhCCcc--cchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcc
Q 016882 166 HAAPMYIAETAPTP--MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 166 ~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 235 (381)
+...++++|.+|++ +|-...++++.+.++|+.++|.+.+++.+.+ ||...|...++-..+.++.+++.+
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-GWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999753 3667788889999999999999999999998 999999999998888777776654
No 149
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.30 E-value=6e-11 Score=114.53 Aligned_cols=153 Identities=21% Similarity=0.282 Sum_probs=135.9
Q ss_pred cccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Q 016882 73 CATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVV 152 (381)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (381)
..+|.+.++. +|.++...|++.+.+.+|..+|+++.+++.+|+++++.+..+.++.+++.+..+++++.+..++
T Consensus 239 aLlPl~a~~~------l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~ 312 (524)
T PF05977_consen 239 ALLPLFARDV------LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALI 312 (524)
T ss_pred HhhhHHHHHH------hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 3456655432 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHh
Q 016882 153 GRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 153 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~ 232 (381)
+.++.|++.........+.+.+..|++.||+.++++++....+..+|..+.|.+.+.. |.+..+.+.++..++..++.+
T Consensus 313 ~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~-g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 313 ALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF-GVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987 888888887776655444433
No 150
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.29 E-value=9.5e-11 Score=111.87 Aligned_cols=143 Identities=16% Similarity=0.109 Sum_probs=102.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh--ch-HHHHHH---HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GR-RRELIL---AALLYLVGALVTALAPDFIIMVVGRFVFGIGIG 162 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Gr-k~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 162 (381)
+|++..+.++..+.+.++..++.++.|+++||+ ++ |..... +..+..++..... ..+.....+..+..|++..
T Consensus 274 ~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 352 (434)
T PRK11663 274 LGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVF 352 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999 33 332222 1111111111111 2233333344444554433
Q ss_pred hHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 163 LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
.........+.|.+|+++|+++.|+.+....+|..++|.+.+++.+.. ||+..|++.+++.++..+..+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 353 GPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW-HWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred hHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHH
Confidence 333344567789999999999999999999999999999999999987 8999999998888776554443
No 151
>TIGR00898 2A0119 cation transport protein.
Probab=99.28 E-value=1.4e-10 Score=112.94 Aligned_cols=136 Identities=21% Similarity=0.139 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchH--HHHHHHHHHHHHHHhhHhHHHHHHHHhhCC
Q 016882 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF--IIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (381)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~ 177 (381)
..+..+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+..++.+++.+...+....+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344556777888999999999999999999999988888877776543 555556667777778788888999999999
Q ss_pred cccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccch
Q 016882 178 TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 178 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 238 (381)
++.|+.++|+.+....+|.+++|.+.+ +.+ . ++...+++.++..++..+..+++||+.
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE-K-WLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-H-HHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 999999999999999999999999998 433 3 677788888888888777777888864
No 152
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.28 E-value=6.5e-11 Score=109.82 Aligned_cols=122 Identities=20% Similarity=0.254 Sum_probs=111.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhch-HHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD-FIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+|.+..+.+++.+...++..++.++.+++.||+|||+.+..+.++.+++..+..+.++ .+.++++.++.|++.+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 321 (365)
T TIGR00900 242 LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVP 321 (365)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 5888999999999999999999999999999999999999888888888777777774 888889999999999999999
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 210 (381)
..+++.|..|+++|++..++.+....+|..+++.+++.+.+..
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 322 QGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999987653
No 153
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=5.1e-11 Score=108.04 Aligned_cols=149 Identities=17% Similarity=0.161 Sum_probs=138.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|++..+..++.....+..++|++++|+|.||+|.|+++.++++++.+.++...+...-..+.++-.+.|...|+.++.+
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~S 362 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASS 362 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHH
Confidence 89999999999999999999999999999999999999999999999988888887777778888899999999999999
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccc
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 237 (381)
-+|..+..|+++-++.+|+++.....+..+||.+.+.+.+..++-|..+....++..+.+++++..|++
T Consensus 363 RSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 363 RSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999999999999988888998888888888877777777764
No 154
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.27 E-value=8.7e-11 Score=113.35 Aligned_cols=144 Identities=15% Similarity=-0.012 Sum_probs=105.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchH-------HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR-------RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGI 161 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 161 (381)
+|++..+.+.+.+++.++..++.+++|+++||+||| ..+.+..++.+++.++....++.+...+..++.+++.
T Consensus 283 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 362 (476)
T PLN00028 283 FGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFV 362 (476)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999875 2333333333343444445556666666666777766
Q ss_pred hhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcc
Q 016882 162 GLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 235 (381)
+...+...+++.+..| ++||...|+.+.+..+|..+++.+.+ .+..++|+..|++.+++.++..++.++++
T Consensus 363 ~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 363 QAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 6666666666777655 78999999988877778877776644 22233799999999988888777776665
No 155
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.27 E-value=2.9e-10 Score=108.48 Aligned_cols=147 Identities=14% Similarity=0.007 Sum_probs=98.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH--H--hchHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA--L--APDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~--~--~~~~~~~~~~r~l~G~~~g~~ 164 (381)
+|.+..+.++..++..++..+++++.|+++||+|||+.+.++.++..+..+... . .++....+..-.+.+++.+..
T Consensus 274 ~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (432)
T PRK10406 274 AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFY 353 (432)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 688888999999998888899999999999999999988776655433332221 1 123332222222333344444
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHHHHH-HHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhccc
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEFFIV-LGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 236 (381)
.+....+++|++|++.|+++.|+.+.... +.....|.+.+.+ +..+.|...+++.++..++.++..+++++
T Consensus 354 ~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 354 TSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 45667889999999999999999876544 3344577777755 44435666777766666666655555443
No 156
>PRK10504 putative transporter; Provisional
Probab=99.26 E-value=3.9e-10 Score=108.82 Aligned_cols=122 Identities=19% Similarity=0.237 Sum_probs=105.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHhhHh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAM 165 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~~ 165 (381)
+|.++.+.+++.....++..++.++.|++.||+|||+.+..+..+..+...+..+. ++.+.+.+..++.|++.+...
T Consensus 292 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (471)
T PRK10504 292 LGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRF 371 (471)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHH
Confidence 58889999999999999999999999999999999999999888888776666553 334445566778888888888
Q ss_pred HHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc
Q 016882 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (381)
Q Consensus 166 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 210 (381)
+....++.+..|++.|+.+.++.+....+|..+|+.+++.+.+..
T Consensus 372 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 372 SSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888999999999999999999999999999999999999887654
No 157
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.26 E-value=5.3e-11 Score=113.38 Aligned_cols=228 Identities=17% Similarity=0.196 Sum_probs=156.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHH----hhchHHH-HHHHHHHHHHHHHHHHHh-c-------hHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGRRRE-LILAALLYLVGALVTALA-P-------DFIIMVVGRF 155 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~Grk~~-l~~~~~~~~~~~~~~~~~-~-------~~~~~~~~r~ 155 (381)
+|+++...|++..+.-+..++..|+.|.++| |+|||+. +++|..+.+++.+++... + ....+.+..+
T Consensus 32 ~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~ 111 (428)
T PF13347_consen 32 LGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYI 111 (428)
T ss_pred cCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHH
Confidence 6999999999999999999999999999999 8996555 556778888877777765 3 2334567777
Q ss_pred HHHHHHhhHhHHHHHHHHhhCC-cccchhHHhHHHHHHHHHHHHHHHHHHHhhcccc------hhHHHHHhhHHHHHHHH
Q 016882 156 VFGIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA------GWRYMYGASTPLAVIMG 228 (381)
Q Consensus 156 l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~w~~~f~i~~~~~~~~~ 228 (381)
+..++.........++..|+.+ +++|.+..+.-..+..+|.++...+.+.+.+..+ +|++..++.+++.++..
T Consensus 112 l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~ 191 (428)
T PF13347_consen 112 LFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF 191 (428)
T ss_pred HHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh
Confidence 7788888888888999999997 5799999999998888888777777776664322 79999998888887765
Q ss_pred HHHh-hcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchH
Q 016882 229 MGMW-WLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK 307 (381)
Q Consensus 229 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (381)
+..+ ..+|.++.. + .++++.+-...+++++++|.++
T Consensus 192 ~i~~~~~ke~~~~~---------------~----------------------------~~~~~~~~~~~~~~~~~nr~~~ 228 (428)
T PF13347_consen 192 LITFFFVKERSVEV---------------T----------------------------EQEKKISLRDSLRSLFRNRPFR 228 (428)
T ss_pred hhhhheeeeccccc---------------c----------------------------ccccccccccchhhhcccchHH
Confidence 5444 456611100 0 0001122244567778777666
Q ss_pred HHHHHHHHHHHHHhhchhHHHhcHHHHHHHc-CCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 308 ALIIGAGLVLFQQITGQPSVLYYAASILQSA-GFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
.+.....+..+. ......+.+++.+.. |. + ........+..+..+++.+++-
T Consensus 229 ~l~~~~~~~~~~----~~~~~~~~~y~~~~vl~~-~-~~~~~~~~~~~~~~~v~~~~~~ 281 (428)
T PF13347_consen 229 ILLLAFFLQWLA----FALMNTFLPYYFTYVLGN-E-GLISIFMLIFFVASIVGSPLWG 281 (428)
T ss_pred HHHHHHHHHHhh----hhhhhhHHHHHHHHHhcC-c-hhhHHHHHHHHHHHHHHHHHHH
Confidence 555544444333 344445556666654 44 2 3445555566666666666544
No 158
>PRK15075 citrate-proton symporter; Provisional
Probab=99.26 E-value=3.1e-10 Score=108.39 Aligned_cols=124 Identities=22% Similarity=0.141 Sum_probs=94.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH-H-H--HhchHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV-T-A--LAPDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~-~-~--~~~~~~~~~~~r~l~G~~~g~~ 164 (381)
+|++..+.+++...+.++..++.+++|+++||+|||+.+..+..+..+...+ . . ..+++..+.+...+.|++.+..
T Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 348 (434)
T PRK15075 269 LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSY 348 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 5888888999999999999999999999999999999988765544332211 1 1 1234444445556667777777
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHH-HHHHHHHHHHHHHHHhhcccchh
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSLLVDLVAGW 213 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~~w 213 (381)
.+....++.|.+|++.|+++.++.+. +..+++.++|.+.+++.+.. |+
T Consensus 349 ~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~-g~ 397 (434)
T PRK15075 349 NGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT-GD 397 (434)
T ss_pred HhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc-CC
Confidence 77777889999999999999999644 44456788999999998876 54
No 159
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.26 E-value=4.8e-10 Score=101.83 Aligned_cols=131 Identities=15% Similarity=0.169 Sum_probs=107.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|+++++.++..+.+..+..+|.++.+++.||+|+|+.+.++..+..++.++....++...+ .+-++.|++.+..+|..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTI 251 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999988888887777666665544333 35568899999999999
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHH
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~ 223 (381)
.+...+..|++ .+++.++. ....+|..++|++.|.+.+.. |.+..|++..++
T Consensus 252 ~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~-g~~~a~~v~~~~ 303 (310)
T TIGR01272 252 FSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCL-GIQLAFALPVPC 303 (310)
T ss_pred HHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhc-cchHHHHHHHHH
Confidence 99888888753 46677775 456689999999999999987 788888754444
No 160
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.26 E-value=1.1e-10 Score=112.25 Aligned_cols=171 Identities=19% Similarity=0.191 Sum_probs=149.1
Q ss_pred HHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHH
Q 016882 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG--RRRELILAALLYL 135 (381)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G--rk~~l~~~~~~~~ 135 (381)
.+...+..+...+....+|.+.+. .+.+..+.+.+.++..+...++.++.|+++|+.. ++....+++++.+
T Consensus 304 ~~~~~~~~~g~~~p~~~l~~~~~~-------~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~g 376 (509)
T KOG2504|consen 304 ALSNLFAYLGFNVPFVYLPSYAKS-------LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAG 376 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-------cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHH
Confidence 333334444444555567777665 7999999999999999999999999999999988 5666777888888
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 016882 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 215 (381)
++.+.++++++++.++..-.+.|++.|.........+.|+.+.++-..+.|+...+.+++..+||++++.+.+..++|..
T Consensus 377 l~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 377 LARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 88889999999999999999999999999999889999999999999999999999999999999999999998877999
Q ss_pred HHHhhHHHHHHHHHHHhhcc
Q 016882 216 MYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 216 ~f~i~~~~~~~~~~~~~~~~ 235 (381)
.|+..+++.++..+.+++.+
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999999998887777765
No 161
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.25 E-value=2.9e-10 Score=108.21 Aligned_cols=129 Identities=14% Similarity=0.134 Sum_probs=98.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH--HHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGI--GIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~--~~g~~~~ 166 (381)
.|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.++.++..++....++.....+.-.+.|+ +..+..+
T Consensus 261 ~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (426)
T PRK12307 261 EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGG 340 (426)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhH
Confidence 58888899999999999999999999999999999999988887776655544433321112222233333 2233345
Q ss_pred HHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Q 016882 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYG 218 (381)
Q Consensus 167 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~ 218 (381)
..+.++.|.+|+++|++++|+......+|..++|.+.+++.+.. ++....+
T Consensus 341 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~-g~~~~~~ 391 (426)
T PRK12307 341 LVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM-GLGAALT 391 (426)
T ss_pred HHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc-cHHHHHH
Confidence 56778899999999999999999999999999999999999876 6554433
No 162
>PRK10054 putative transporter; Provisional
Probab=99.25 E-value=1.1e-10 Score=109.92 Aligned_cols=141 Identities=12% Similarity=0.082 Sum_probs=117.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
.+.+....+++.+.+.+.....+++.|++.||+++|+.+..+..+..++.+...+. ++.+.+.++.++.|+|.+...+.
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 318 (395)
T PRK10054 239 SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPG 318 (395)
T ss_pred cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 46777788888888888888888999999999999999999988888877777664 57777778889999999888888
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHH
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~ 231 (381)
...++.+..|++.|++..+..+ ...+|..+||.+++.+.++. |....|++.++...+..++.
T Consensus 319 ~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 319 EYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL-PPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc-ChhhHHHHHHHHHHHHHHHH
Confidence 8999999999999999988755 45589999999999999988 88888877666655544333
No 163
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=4.1e-10 Score=103.02 Aligned_cols=142 Identities=21% Similarity=0.256 Sum_probs=120.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
.|++.+..+++..++.++..+|++++|++.|| +.|+.+.....+..+..+...+. ++.+..++.-++.|+..+.....
T Consensus 242 ~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~ 320 (394)
T COG2814 242 AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQG 320 (394)
T ss_pred cCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhH
Confidence 68899999999999999999999999999999 99999888877777777666654 45566666777788877766666
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
....+++ .-++.+..+.+++...+++|..+|..+++.+.++. |+....++.+++.++.+++.++
T Consensus 321 ~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 321 LQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHH
Confidence 6666667 44588999999999999999999999999999996 9999999999998887776655
No 164
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.24 E-value=5.9e-10 Score=105.06 Aligned_cols=149 Identities=19% Similarity=0.150 Sum_probs=117.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc---h-H--H---HHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP---D-F--I---IMVVGRFVFGI 159 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~---~-~--~---~~~~~r~l~G~ 159 (381)
-|++..++.+......+...++.+++.++.||+|||+.++++..+..+..+++.... + . | ..+++.++..+
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~ 379 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFII 379 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999888887776532 1 1 1 12233344443
Q ss_pred HHhh-HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHH-HHHHhhcccc
Q 016882 160 GIGL-AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM-GMGMWWLPAS 237 (381)
Q Consensus 160 ~~g~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~-~~~~~~~~~~ 237 (381)
+.+. ..|+.+-+.+|++|++.|..+.++......++.++-......+.+..++ +.|++..+++++. +.++..+||+
T Consensus 380 ~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 380 SFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred hhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHhCccc
Confidence 3332 3677788999999999999999999999999998888888888777644 6777777777765 4555669998
Q ss_pred hh
Q 016882 238 PR 239 (381)
Q Consensus 238 ~~ 239 (381)
+.
T Consensus 458 kg 459 (485)
T KOG0569|consen 458 KG 459 (485)
T ss_pred CC
Confidence 54
No 165
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.22 E-value=1.2e-10 Score=111.44 Aligned_cols=148 Identities=15% Similarity=0.130 Sum_probs=101.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH---HHHHHHHH--hchHHHHHHHHHHHHHHHhh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL---VGALVTAL--APDFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~---~~~~~~~~--~~~~~~~~~~r~l~G~~~g~ 163 (381)
.|.+..+.++..+++.++..++.++.|+++||+++++....+..+.. ++.+.... ..+.+...+..++.|++..+
T Consensus 282 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 361 (438)
T TIGR00712 282 KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYG 361 (438)
T ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHcc
Confidence 58888999999999999999999999999999965432222322221 12122222 12344444444555554333
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH-HHhhcccc
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLG-MVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM-GMWWLPAS 237 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~-~~~~~~~~ 237 (381)
..........|.+|+++|+++.|+.+....+| ..++|.+.+.+.+.. ||...|++.+++.++.++ ..+++||.
T Consensus 362 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 362 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33333456789999999999999998877776 578999999999987 899999888777666444 44446654
No 166
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.21 E-value=9.9e-11 Score=109.14 Aligned_cols=128 Identities=23% Similarity=0.231 Sum_probs=97.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhch-HHHHH-HHH-HHHHHHHHHHHH--hchHHHHHHHHHHHHHHHhh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELI-LAA-LLYLVGALVTAL--APDFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-k~~l~-~~~-~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~g~ 163 (381)
+|.+..+.+++.+...++..++.++.|++.||+++ |+... ... ....++...... ..+.+.+.++.++.|+....
T Consensus 247 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 326 (379)
T TIGR00881 247 KGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYG 326 (379)
T ss_pred hCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhh
Confidence 68899999999999999999999999999998643 33222 221 112222222222 23455566677777876666
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 217 (381)
..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.. ||++.|
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f 379 (379)
T TIGR00881 327 PQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF-GWAGAF 379 (379)
T ss_pred hhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh-cccccC
Confidence 66667788999999999999999999999999999999999999987 888754
No 167
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.20 E-value=9.9e-10 Score=103.35 Aligned_cols=140 Identities=19% Similarity=0.052 Sum_probs=110.2
Q ss_pred ccCChhHHHHHHHHHHH-HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH------hchHHHHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTAL------APDFIIMVVGRFVFGIGI 161 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~r~l~G~~~ 161 (381)
.|+++++.+++..+..+ ...++.++.|++.||+|+|+.+..+..+.++..+.... .++...+.....+.+++.
T Consensus 238 ~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (390)
T TIGR02718 238 AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLIT 317 (390)
T ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHH
Confidence 69999999999888764 66778899999999999999998877665333332221 123344455556667777
Q ss_pred hhHhHHHHHHHHhhCCc-ccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH
Q 016882 162 GLAMHAAPMYIAETAPT-PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 162 g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
|...+...+.+.+..++ +++++.+++.+....+|..++|.+++.+.+.. ||+..|++.+++.++.++
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 318 GITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHH
Confidence 87878888888788776 88999999999999999999999999999887 899999988877666544
No 168
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.19 E-value=9.9e-09 Score=94.50 Aligned_cols=151 Identities=19% Similarity=0.199 Sum_probs=128.1
Q ss_pred ccCChhHHH-HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIG-LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
.|++.+|.. -+.-+..-.+.+..++...++|..|-|++++++.+...+..++..+.++.+.+-+..++.|++.+. ..+
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-eva 113 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVA 113 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHH
Confidence 688887765 455666777888889999999999999999999999999999999999999999999999998884 677
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc-cchhHHHHHhhHHHHHHHHHHHhhcccchhH
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL-VAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~ 240 (381)
..+|+--..|+++..++.+..-...-+|..++..++..+... ..+++...++......+.++..+++|..++.
T Consensus 114 y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S 187 (412)
T PF01770_consen 114 YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRS 187 (412)
T ss_pred HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 788998999999999999999999999999999999888752 2267777777777777777778888886654
No 169
>PRK09848 glucuronide transporter; Provisional
Probab=99.19 E-value=5e-09 Score=100.51 Aligned_cols=121 Identities=21% Similarity=0.252 Sum_probs=99.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+|.+....++......++..++.++.+++.||+|+|+.+.++.++.+++.++..+.+ +++.+++..++.|+|.+...+
T Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~ 338 (448)
T PRK09848 259 LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMT 338 (448)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 566665555555555677888999999999999999999999988888877776643 577777788899999999999
Q ss_pred HHHHHHHhhCCcc-------cchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 167 AAPMYIAETAPTP-------MRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 167 ~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
...++.+|..|.+ ++|...++.+....+|..+++.+.+.+.+.
T Consensus 339 ~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 339 VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888754 469999999999999999999999887643
No 170
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.18 E-value=3.3e-10 Score=102.73 Aligned_cols=172 Identities=20% Similarity=0.132 Sum_probs=137.8
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHH-HH
Q 016882 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRRRELI-LA 130 (381)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Grk~~l~-~~ 130 (381)
+..++++++..+..+..+.-..|.+..|. .|.+..++++..+.+-++...|.++.|+++||+ |||.... +.
T Consensus 254 iW~la~a~vfvYivR~gi~dW~p~YL~e~------k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~ 327 (448)
T COG2271 254 IWLLALANVFVYVVRYGINDWGPLYLSEV------KGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIF 327 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHh------cCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHH
Confidence 34556677777778877777777766542 699999999999999999999999999999996 6665444 44
Q ss_pred HHHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHH-HHHHHHHHHHHhh
Q 016882 131 ALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLV 207 (381)
Q Consensus 131 ~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~ 207 (381)
+++..++.+..-.++ |+++..++.++.|+..-+.+-+......|..|++--|++.|+...+..+ |.+.+....+++.
T Consensus 328 ~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~ 407 (448)
T COG2271 328 MLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIA 407 (448)
T ss_pred HHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeE
Confidence 555555555555555 4688888999999987777777788889999999999999999888877 9999999999998
Q ss_pred cccchhHHHHHhhHHHHHHHHHHHh
Q 016882 208 DLVAGWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 208 ~~~~~w~~~f~i~~~~~~~~~~~~~ 232 (381)
+.+ ||...|++..+.++++.++++
T Consensus 408 d~~-gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 408 DTW-GWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred ecC-CCcchHHHHHHHHHHHHHHHH
Confidence 886 999999988888777555443
No 171
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.18 E-value=5.4e-10 Score=103.30 Aligned_cols=147 Identities=14% Similarity=0.188 Sum_probs=127.3
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (381)
+.+....|.+.++..+.-++.-.+.+++.+|+|.|+.++++.++..+=.++++++++.+.+.+.+.+.|+-.+.......
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCcccchhHHhHH-HHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh-cccc
Q 016882 170 MYIAETAPTPMRGQLISLK-EFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPAS 237 (381)
Q Consensus 170 ~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~-~~~~ 237 (381)
-|+.+.+|+|..++...+. +....+|..+.+.++|.+.++. |.+..|++.+.+.++..+...+ ++++
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~-G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI-GFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-CcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 9999999999988888884 7899999999999999999998 9999998888887765544444 5443
No 172
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.17 E-value=5.6e-09 Score=100.78 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=95.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH-----hchHHHHHHHHHHHHHHHhhHhH
Q 016882 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-----APDFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+....+++.++..++.+++.+++++++||+|+|+.+.++.++.+++.+.... ..+.+.+++..++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556777778777899999999999999999999999888776666555432 34567777788889999999999
Q ss_pred HHHHHHHhhCC-------cccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 167 AAPMYIAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 167 ~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
...++++|..+ ++..|...++.....-+|..+++.+.+.+.+
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 4555668888999999999999999998875
No 173
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.16 E-value=1e-09 Score=103.03 Aligned_cols=142 Identities=12% Similarity=0.131 Sum_probs=107.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-APDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+|.+..+.+++.+...++..++.++.|++.||+|+|+.+.++..+.+++.++... .++.+...++.++.+++.+...+.
T Consensus 230 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 309 (382)
T PRK10091 230 SGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAP 309 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHH
Confidence 6889999999999999999999999999999999999999888887777655543 455566666666777765544443
Q ss_pred HH-HHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHh
Q 016882 168 AP-MYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 168 ~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~ 232 (381)
.. ....+..+++.++.. ..+....+|..+||.+++.+.+..++|++.+.+.++++++.+....
T Consensus 310 ~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 310 LQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 33 344444455555544 3467788999999999999998656899999998888776544333
No 174
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.15 E-value=1.8e-08 Score=90.36 Aligned_cols=227 Identities=15% Similarity=0.190 Sum_probs=144.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|++..|++.+....+....+...+.|.++||+|||+.-++..++.+++++ +-..++++.++++|++.|++....+...
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~F 142 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAF 142 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999988885 4455789999999999999998887766
Q ss_pred HHH-HHhh----CCcccchhHHhHHH-HHHHHHHHHHHHHHHHhhcccc-hhHHHHHhhHHHHHHHHHHHhh-cccchhH
Q 016882 169 PMY-IAET----APTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVA-GWRYMYGASTPLAVIMGMGMWW-LPASPRW 240 (381)
Q Consensus 169 ~~~-~~~~----~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~-~w~~~f~i~~~~~~~~~~~~~~-~~~~~~~ 240 (381)
-++ +.|. +|++..+...+... ...++-.+.+..++.++.+..+ |-..+|....++.+++.++... -+|.+..
T Consensus 143 EsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 143 ESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 444 3443 23333333333222 2334444555556666655441 3477888888877775554432 3443210
Q ss_pred HHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchHHHHHHHHHHHHHH
Q 016882 241 LLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQ 320 (381)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (381)
... ..+. .+.-+..++.+.++ ++.+.+...+....
T Consensus 223 -----------------------------~~~---~~~~----------~~~~~~a~~~i~~d---~ril~LG~~qslFE 257 (354)
T PF05631_consen 223 -----------------------------TSS---SSSL----------SGSFREAWRAILSD---PRILLLGLIQSLFE 257 (354)
T ss_pred -----------------------------ccc---ccch----------HHHHHHHHHHHHcC---chhHHHHHHHHHHH
Confidence 000 0000 00011223344444 35555566666667
Q ss_pred hhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHH
Q 016882 321 ITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLF 364 (381)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 364 (381)
...+.....|.|.+-. -+..---+.+..-+.+..++|+.++
T Consensus 258 ~smy~FVflWtPaL~~---~~~~~P~GlIFssFM~a~MlGS~lf 298 (354)
T PF05631_consen 258 GSMYLFVFLWTPALDP---DDEELPLGLIFSSFMVAMMLGSSLF 298 (354)
T ss_pred HHHHHheeeeeceecC---CCCCCCchHHHHHHHHHHHHHHHHH
Confidence 6766777778887651 1112234555556666667777665
No 175
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.15 E-value=1.6e-09 Score=102.47 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=102.2
Q ss_pred ccCChhHHHHHHHHHH-HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH---HHh-chHHHHHHHHHH----HHH
Q 016882 89 YDLSSVEIGLITSGSL-YGALIGSILAFNIADILGRRRELILAALLYLVGALVT---ALA-PDFIIMVVGRFV----FGI 159 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~r~l----~G~ 159 (381)
+|++.++.+++.+... ++..++.+++|++.||+|+|+.+.++.++..+..+.. +.. ++.+.++++.++ .|+
T Consensus 240 ~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 319 (402)
T PRK11902 240 AGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGM 319 (402)
T ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 6899999999986654 5689999999999999999998887776666554433 343 455666655544 445
Q ss_pred HHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhc
Q 016882 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (381)
Q Consensus 160 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 234 (381)
+.+...+....++.+.+|.+ ..++.+....+|..+++.+++.+.+.. ||+..|.+.++++++.++..+..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~-G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 320 GTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEAY-GWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666666666666644 455666666778877778899999987 99999999998888766655443
No 176
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.14 E-value=3.1e-09 Score=96.53 Aligned_cols=175 Identities=15% Similarity=0.140 Sum_probs=120.6
Q ss_pred HHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc-----------
Q 016882 142 ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV----------- 210 (381)
Q Consensus 142 ~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------- 210 (381)
+...+++.++++-++.|.|.+..++..+.++++..|++++++.+++.+.++++|..++|.+++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 345789999999999999999999999999999999999999999999999999999999999888321
Q ss_pred ----chhHHHHHhhHHHHHHHHHHHhhc--ccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHH
Q 016882 211 ----AGWRYMYGASTPLAVIMGMGMWWL--PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILT 284 (381)
Q Consensus 211 ----~~w~~~f~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (381)
.+|+++|++.+.+.++..+.+.+. ||.++ ++.+ +
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----------------~~~~--------------------~--- 124 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----------------ADVA--------------------R--- 124 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----------------cccc--------------------c---
Confidence 379999997777665554444443 33210 0000 0
Q ss_pred hhhhccccccccchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHHH---cCCCCCchhHHHHHHHHHHHHHHh
Q 016882 285 ELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQS---AGFSAASDATRVSILLGLFKVGSC 361 (381)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~i~~ 361 (381)
. ..++....++.++++ ..++ ..+..+........+..|.+.++++ .|+ +.+++...........++|.
T Consensus 125 ~----~~~~~~~~~~~~~~~---~~~l-~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~-s~~~a~~~~s~~~~~~~iGr 195 (310)
T TIGR01272 125 V----SSGDTTQKTSAFQFT---HLVL-GALGIFVYVGAEVSAGSFLVNFLSDPHALGL-PEDQAAHFTAYTWGGAMVGR 195 (310)
T ss_pred c----ccccccchhhHHhhH---HHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 0 000000111233322 2233 3344444444456777888888864 377 67777888888888888888
Q ss_pred HHHH
Q 016882 362 TLFF 365 (381)
Q Consensus 362 ~~~~ 365 (381)
+++-
T Consensus 196 ~~~~ 199 (310)
T TIGR01272 196 FIGS 199 (310)
T ss_pred HHHH
Confidence 8755
No 177
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.14 E-value=3.2e-10 Score=107.44 Aligned_cols=135 Identities=18% Similarity=0.125 Sum_probs=97.0
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE-LILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+.+..+.+++.+...++..++.++.|+++||++||+. +....++..++..+.....+....+++-.+.+++.....+..
T Consensus 275 ~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (412)
T TIGR02332 275 GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIF 354 (412)
T ss_pred CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHH
Confidence 6677889999999999999999999999999997764 334443444333222222232222222223333333333444
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHH
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLA 224 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~ 224 (381)
.....|.+|+++|+.++|+.+....+|..++|.+.+.+.+..++|++.|++.++..
T Consensus 355 ~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 355 WTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 55557889999999999999999999999999999999998767999988777654
No 178
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.14 E-value=3.1e-09 Score=100.06 Aligned_cols=137 Identities=15% Similarity=0.119 Sum_probs=110.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|++..+.+++...+.++..++.++.+++.||.+++..+....+......++....++.+.+.+..++.|++.+...+..
T Consensus 247 ~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 326 (394)
T PRK10213 247 AGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGW 326 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 68899999999999999999999999999999654443443333334444444556678888888999999999999999
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHH
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~ 227 (381)
.+++.+..| +++++..++......+|..+|+.+++.+.+.. |++..++..+++.++.
T Consensus 327 ~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~-g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 327 STWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNI-GLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhhHHHHHHHHHHHH
Confidence 989999887 55678888888889999999999999999987 8888888877765544
No 179
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.14 E-value=1.3e-09 Score=116.57 Aligned_cols=138 Identities=21% Similarity=0.247 Sum_probs=119.1
Q ss_pred ccCChh-HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSV-EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+|.+.. +.+++.++..++.++++++.|++.||+++++.+.++.++.+++.++..+..+.+.++++.++.|++.+...+.
T Consensus 263 ~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (1146)
T PRK08633 263 LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVP 342 (1146)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 688888 9999999999999999999999999999999999888888888888888888888889999999999998889
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
..+++.+..|++.||+++++.+....+|.++++.+++.+.....++...|++.+.+.++
T Consensus 343 ~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 343 LNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888777654322566666666555444
No 180
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.13 E-value=1.2e-09 Score=101.41 Aligned_cols=126 Identities=20% Similarity=0.171 Sum_probs=101.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
.|.+..+.+.+.++..++.++++++.|++.||+ +||+.+.++..+.+++.++..+.++.+... ...+.|++.|...+.
T Consensus 227 ~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 227 HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPL 305 (355)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHH
Confidence 688899999999999999999999999999999 567777777777777777666655433222 456789999988888
Q ss_pred HHHHHHhhCC-cccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 016882 168 APMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (381)
Q Consensus 168 ~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 215 (381)
..+.+.+..+ +++++...++.+....+|..++|.+.+.+.++.++|.+
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 7777765554 56778999999988899999999999999988755643
No 181
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.13 E-value=2.9e-09 Score=92.24 Aligned_cols=161 Identities=19% Similarity=0.144 Sum_probs=124.0
Q ss_pred ccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh---
Q 016882 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--- 144 (381)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~--- 144 (381)
....+...|++++. +|+|.+|...+.+...+|..+ +++.|.+.|++|++.++.+|.+...++..+...+
T Consensus 18 ~Y~Fs~yS~~Lk~~-------l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 18 TYTFSAYSPQLKSR-------LGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred ccchhhhhHHHHHH-------hCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34455566777776 899999999999999999987 4889999999999999999999999988877663
Q ss_pred ----chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhh
Q 016882 145 ----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAS 220 (381)
Q Consensus 145 ----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~ 220 (381)
.++|.+.+..++.|.+.+...........+.|| ++||++.|+.-...++++.+-..+...+.+.. .-...+...
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~-~~~fll~la 167 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD-PSSFLLFLA 167 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCC-hHHHHHHHH
Confidence 357888888888888777666666666778998 58999999999999999988888877776653 334444444
Q ss_pred HHHHHHHHHHHhhcccch
Q 016882 221 TPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~ 238 (381)
..+.+++++..++++..|
T Consensus 168 ~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 168 VLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHHHHHhhheeccC
Confidence 444455555656655433
No 182
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.11 E-value=2.2e-09 Score=101.36 Aligned_cols=141 Identities=16% Similarity=0.093 Sum_probs=111.3
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHH-hhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIAD-ILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+.++.+.+++.++..++...+..+.+++.| |++.++.+..+..+.+++.++.+..++++.+.+...+.|++.+...+..
T Consensus 239 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~ 318 (400)
T PRK11646 239 AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPAR 318 (400)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccH
Confidence 346678888888887777666666666665 5676777778888888888778888888888888888999988888898
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccc--h-hHHHHHhhHHHHHHHHHH
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA--G-WRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~-w~~~f~i~~~~~~~~~~~ 230 (381)
.+++.+..|+++||+.+++.+....+|..+||.+++.+.+..+ + ....+++.++++++..+.
T Consensus 319 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 319 ETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987642 2 345555555555554443
No 183
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.11 E-value=3.8e-08 Score=94.21 Aligned_cols=234 Identities=17% Similarity=0.113 Sum_probs=153.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHH-HHHHHHHHHHHHh--chHHHHHHHHHHHHHHHhhHhHHHH
Q 016882 93 SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA-LLYLVGALVTALA--PDFIIMVVGRFVFGIGIGLAMHAAP 169 (381)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~-~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (381)
.+..++..++..+..++..|+.|.++|+-|+||.++... .+..+++.++.+. .+++...+..++.-++.+......+
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677889999999999999999999998777666544 4444555555553 3466666677777788999999999
Q ss_pred HHHHhhCCcccc--------------------------hhHHhHHHHHHHHHHHHHHHHHHHhhccc-------chhHHH
Q 016882 170 MYIAETAPTPMR--------------------------GQLISLKEFFIVLGMVGGYGIGSLLVDLV-------AGWRYM 216 (381)
Q Consensus 170 ~~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------~~w~~~ 216 (381)
+++.|+.+++.+ ++..+.-.....+|+++.-.+.-.+.... .+-|..
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~ 228 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA 228 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence 999999999998 89999988888888888777766654322 235888
Q ss_pred HHhhHHHHHH-HHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccc
Q 016882 217 YGASTPLAVI-MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEV 295 (381)
Q Consensus 217 f~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (381)
+.+.++..++ .+...+++|+.|+.. + .++.. .-.+...++ -..
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~~~---~-~~~~~-----~~~~~g~~~---------------------------l~~ 272 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPGPR---P-LPSGS-----SYLRFGFKR---------------------------LWR 272 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCC---C-CCcch-----hHHHHHHHH---------------------------HHH
Confidence 8888887665 445556677765410 0 00000 000000000 012
Q ss_pred cchhhccccchHHHHHHHHHHHHHHhhchhHHHhcHHHHHH-HcCCCCCchhHHHHHHHHHHHHHHhHHHHHH
Q 016882 296 SLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKVGSCTLFFMS 367 (381)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 367 (381)
+++++.+.| .+.. ..+.++...-+++.+......+.+ +.|+ +..+......+..+.+++|++++...
T Consensus 273 t~k~~~~~~---~~~~-fLia~~l~~dg~~ti~~~~~i~a~~~lg~-s~~~l~~~~l~~~i~a~~Ga~~~g~l 340 (477)
T PF11700_consen 273 TFKEIRKLR---QLFL-FLIAYFLYSDGVNTIISFAGIYATEVLGM-STTQLIVFGLVVQIVAIIGALLFGWL 340 (477)
T ss_pred HHHHHHhCh---HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCc-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223332222 2222 333333344556666666666665 6799 77888888888999999999987655
No 184
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.10 E-value=7.1e-09 Score=96.98 Aligned_cols=149 Identities=22% Similarity=0.210 Sum_probs=120.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hch-HHHHHHHHHHHHHHHHHHHHhch------HHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGR-RRELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Gr-k~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~ 157 (381)
+|+++..+|.+..+.=+.-++.-|+.|.+.|| +|| |+.++.+.+..++.+.++..+++ ....++...+.
T Consensus 43 ~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~ 122 (467)
T COG2211 43 FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLL 122 (467)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHH
Confidence 79999999999999999999999999999995 775 56677788888888888877663 45566778889
Q ss_pred HHHHhhHhHHHHHHHHhhCC-cccchhHHhHHHHHHHHHHHHHHHHHHHhhcc------cchhHHHHHhhHHHHHHHHHH
Q 016882 158 GIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL------VAGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 158 G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~~~w~~~f~i~~~~~~~~~~~ 230 (381)
+++.........++.+|+.+ +++|.+..+.-+.+..+|.++...+..++... ..||+...++.++++++..+.
T Consensus 123 ~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~ 202 (467)
T COG2211 123 GLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLF 202 (467)
T ss_pred HHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 99999888888889999884 69999999999999999987777776666631 337888888888887776655
Q ss_pred Hhh-cccc
Q 016882 231 MWW-LPAS 237 (381)
Q Consensus 231 ~~~-~~~~ 237 (381)
.++ .+|.
T Consensus 203 ~~~~v~ER 210 (467)
T COG2211 203 CFFNVKER 210 (467)
T ss_pred HHHHhhcc
Confidence 554 5554
No 185
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.10 E-value=8e-10 Score=106.50 Aligned_cols=146 Identities=13% Similarity=0.076 Sum_probs=102.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH--------HHHHHHHH--HHHHHHHHH-hchHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE--------LILAALLY--LVGALVTAL-APDFIIMVVGRFVF 157 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~--------l~~~~~~~--~~~~~~~~~-~~~~~~~~~~r~l~ 157 (381)
+|.+..+.+++.++..++..++.++.|+++||+++|+. +..+.... .+..+.... ..+....+++-.+.
T Consensus 292 ~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (465)
T TIGR00894 292 LRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLA 371 (465)
T ss_pred hCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 68899999999999999999999999999999875421 11111111 111111122 23444444555555
Q ss_pred HHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc--chhHHHHHhhHHHHHHHHHHHhhcc
Q 016882 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV--AGWRYMYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 158 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--~~w~~~f~i~~~~~~~~~~~~~~~~ 235 (381)
+.+.+...+.......|..|+ .+|.+.++.+....+|..++|.+.+.+.+.. ++|+..|.+.++..++..+...+.+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 372 NAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 655555555555556677764 8999999999999999999999999887643 3699999999888887666555543
No 186
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.10 E-value=5.5e-09 Score=96.68 Aligned_cols=141 Identities=17% Similarity=0.232 Sum_probs=89.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH---HHHHHHHHh----chHH-HHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL---VGALVTALA----PDFI-IMVVGRFVFGIG 160 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~---~~~~~~~~~----~~~~-~~~~~r~l~G~~ 160 (381)
.|++.+++|.+.++..+...+.+++.|.++||+|.||-++....... ...+...+. .|.+ ..+++-...|++
T Consensus 38 ~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~ 117 (412)
T PF01306_consen 38 AGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLV 117 (412)
T ss_dssp H---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999997666554332222 122222221 2332 223333444555
Q ss_pred HhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 161 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
.....++.-+++.++. ++.+.=.|=.-.+.++|-+++..++|.+.+. +-+..||+..+..++..++.++
T Consensus 118 f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i--~p~~~fwi~s~~~~il~lll~~ 186 (412)
T PF01306_consen 118 FNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI--NPNIIFWIASAAAIILLLLLLL 186 (412)
T ss_dssp TTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHS
T ss_pred HcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee--CccHHHHHHHHHHHHHHHHHHH
Confidence 5555666666655543 3345555566778899999999999998864 5678888877766655444444
No 187
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.09 E-value=5.9e-09 Score=97.65 Aligned_cols=128 Identities=19% Similarity=0.331 Sum_probs=97.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-----chHHHHHHHHHHHHHHHhh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----PDFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~g~ 163 (381)
+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++.... ++...+.+..++.|++.+.
T Consensus 237 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (385)
T TIGR00710 237 MGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSM 316 (385)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999988887777766665543 2344556667788999998
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHH-HHHHHHHHHHHhhcccchhHHHHHh
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVDLVAGWRYMYGA 219 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~w~~~f~i 219 (381)
..+.......|..| ++|+++.++.+..... |...++.++ .+.+.. +|...+..
T Consensus 317 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~-~~~~~~~~ 370 (385)
T TIGR00710 317 ISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNT-AWPMSLSC 370 (385)
T ss_pred HHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccC-hHHHHHHH
Confidence 88888888889887 6789999998766654 555555544 443332 45444433
No 188
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.09 E-value=9.8e-09 Score=97.14 Aligned_cols=137 Identities=17% Similarity=0.161 Sum_probs=109.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-----chHHHHHHHHHHHHHHHhh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----PDFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~g~ 163 (381)
+|.++.+.++......++..++.++.|++.||+|+|+.+.++.++..++.++.... ++.+.++++.++.|++.+.
T Consensus 246 ~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 325 (406)
T PRK15402 246 EQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGL 325 (406)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHH
Confidence 68889999998888888999999999999999999999998888777766666543 3566677888899999888
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHH
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~ 227 (381)
..+......... ++++||+..++.+....+|..+|+.+++.+.+.. ++....+..++..++.
T Consensus 326 ~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 326 ANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG-GNGLFNLFNLANGLLW 387 (406)
T ss_pred HhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC-chHHHHHHHHHHHHHH
Confidence 777666655443 4589999999999999999999999999998876 5555444444444443
No 189
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.09 E-value=9.5e-09 Score=96.36 Aligned_cols=148 Identities=22% Similarity=0.274 Sum_probs=118.6
Q ss_pred cc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-chHHHHH----HHHHHHHHHHh
Q 016882 89 YD-LSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMV----VGRFVFGIGIG 162 (381)
Q Consensus 89 ~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-~~~~~~~----~~r~l~G~~~g 162 (381)
.| .+....+.+.++..+.-++.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+... +...+.|+..+
T Consensus 237 ~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~ 316 (400)
T PF03825_consen 237 LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFG 316 (400)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHH
Confidence 45 667778888888888889999999999999999999999999999988888887 4544333 34567999999
Q ss_pred hHhHHHHHHHHhhCCcccchhHHhHHHH-HHHHHHHHHHHHHHHhhcccc-----hhHHHHHhhHHHHHHHHHHHh-hcc
Q 016882 163 LAMHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSLLVDLVA-----GWRYMYGASTPLAVIMGMGMW-WLP 235 (381)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~-----~w~~~f~i~~~~~~~~~~~~~-~~~ 235 (381)
........|+.+..|++.|+++.++++. ..++|..+|..++|++.+..+ .|...+.+.+++.++..++.+ +++
T Consensus 317 ~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 317 LFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999865 678999999999999998651 344555666666555444333 344
Q ss_pred c
Q 016882 236 A 236 (381)
Q Consensus 236 ~ 236 (381)
|
T Consensus 397 ~ 397 (400)
T PF03825_consen 397 P 397 (400)
T ss_pred C
Confidence 4
No 190
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.07 E-value=2.3e-09 Score=114.52 Aligned_cols=138 Identities=19% Similarity=0.063 Sum_probs=115.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh--------------------chHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--------------------PDFI 148 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~--------------------~~~~ 148 (381)
+|.+..+.+++.+++.++.++++++.|+++++.++++.+..+.++.+++.+..++. .+.+
T Consensus 256 ~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1140)
T PRK06814 256 LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW 335 (1140)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH
Confidence 68899999999999999999999999999998887777666666665555544442 6778
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
.++++.++.|++.+...+...+++.+.+|++.||+++|+.+....+|..+++.+.+.+.....++...+++.+++.++
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 336 RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999999999999999999999999998875433777777666655444
No 191
>PRK09848 glucuronide transporter; Provisional
Probab=99.07 E-value=7e-09 Score=99.46 Aligned_cols=117 Identities=10% Similarity=0.102 Sum_probs=79.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHH-HHHHHHHHHHHHHHH-Hh----c--hHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL----GRRREL-ILAALLYLVGALVTA-LA----P--DFIIMVVGRFV 156 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----Grk~~l-~~~~~~~~~~~~~~~-~~----~--~~~~~~~~r~l 156 (381)
+|++..++|.+.++..+..++..++.|+++||. |||+.+ .++.+...+..++.. .. + ..+..++...+
T Consensus 39 ~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (448)
T PRK09848 39 AGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMG 118 (448)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHH
Confidence 699999999999999999999999999999996 766644 555554444444332 11 1 22334455567
Q ss_pred HHHHHhhHhHHHHHHHHhhCC-cccchhHHhHHHHHHH-----HHHHHHHHHHHH
Q 016882 157 FGIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIV-----LGMVGGYGIGSL 205 (381)
Q Consensus 157 ~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~-----~g~~~~~~~~~~ 205 (381)
.+++.+...+...++..+..+ +++|....++-..+.. ++..++|.++..
T Consensus 119 ~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 119 LGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788888888777777777664 4678887766554433 444555555543
No 192
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.04 E-value=6e-10 Score=99.00 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchh
Q 016882 104 LYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQ 183 (381)
Q Consensus 104 ~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~ 183 (381)
.+.-..|.++.+++.||+|||+++....++.+++.++...+.+.....+.-+..-++..+.+...++|..|.+|.+.|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 34566788999999999999999999999999999988887654444444444444455556667889999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccc
Q 016882 184 LISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (381)
Q Consensus 184 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 237 (381)
+.|.-.....+|+.+.|.++ ...+. +-..+..+.+.++++..+...++|-.
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e~--s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAEL--STSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhcc--ceeehHHHHHHHHHHHHHHheeeeec
Confidence 99999999999999999999 33332 23355566677777777777777643
No 193
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.03 E-value=1.2e-08 Score=96.18 Aligned_cols=135 Identities=17% Similarity=0.113 Sum_probs=107.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|.++.+.|++.+...++..+++++.+++.||.++|+.+..+.. .++......+.++++...+..++.|++.+...+..
T Consensus 236 lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~ 314 (393)
T PRK11195 236 LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPM 314 (393)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhH
Confidence 68899999999999999999999999999999999988887753 34444455566777777788889999998888888
Q ss_pred HHHHHhhCCccc-chhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 169 PMYIAETAPTPM-RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 169 ~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
.+.+.+..|++. +|++.++.+....+|..++..+.+.+... |-+..+++.+...++
T Consensus 315 ~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 371 (393)
T PRK11195 315 NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKL--GVPVVAVIVGFGLLV 371 (393)
T ss_pred HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHH
Confidence 888888766654 79999999999999999999999876443 445544444433333
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=99.03 E-value=3.7e-08 Score=94.34 Aligned_cols=116 Identities=13% Similarity=0.194 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH--hchHHHHHHHHHHHHHHHhhHhHHHHHH
Q 016882 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL--APDFIIMVVGRFVFGIGIGLAMHAAPMY 171 (381)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (381)
+..+.+.....+...++.+++++++||+|+|+.+.++.++.+++.....+ .++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666677888899999999999999999999887766654443333 3567778888899999999999999999
Q ss_pred HHhhCC-------cccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 172 IAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 172 ~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
++|..+ ++..|...++......+|..+++.+++.+.+.
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 34456778888999999999999999988764
No 195
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.03 E-value=5.9e-09 Score=100.93 Aligned_cols=121 Identities=19% Similarity=0.265 Sum_probs=107.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH----hchHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL----APDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~r~l~G~~~g~~ 164 (381)
+|.++.+.+++.....++..++.++.|++.||+|||+.+.++..+.+++..+..+ ..+++.+....++.|++.+..
T Consensus 286 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~ 365 (485)
T TIGR00711 286 LGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCF 365 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999998888888777663 235667777788999999988
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
.+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.++
T Consensus 366 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 366 FMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877788888889999999999999999999999999999988764
No 196
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.02 E-value=1.1e-09 Score=99.32 Aligned_cols=145 Identities=18% Similarity=0.113 Sum_probs=119.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-------chHHHHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-------PDFIIMVVGRFVFGIGI 161 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~r~l~G~~~ 161 (381)
|+.++.+.+.+...+.+...+..+.+|+++||+|.++++.+.....+++..+.++. .+....++..+..+++.
T Consensus 249 fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~ 328 (417)
T COG2223 249 FGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFA 328 (417)
T ss_pred cCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999988888888877775 34444444455555555
Q ss_pred hhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhc
Q 016882 162 GLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (381)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 234 (381)
|.....+..++..++|+ +-|.+.|+.....++|+..-|..-+...+..+.++..|++...+.+++.+..+..
T Consensus 329 G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 329 GLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred ccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666677778874 7799999999999999999999999999888679999999999988877766543
No 197
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.01 E-value=1.3e-08 Score=94.82 Aligned_cols=151 Identities=19% Similarity=0.077 Sum_probs=102.2
Q ss_pred ccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhch---HHHHHH-HHHHHHHHHHHHHHhchH
Q 016882 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR---RRELIL-AALLYLVGALVTALAPDF 147 (381)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr---k~~l~~-~~~~~~~~~~~~~~~~~~ 147 (381)
...+|++.++ .|.+.. .+...++..+...++ .++++||..| |+.... ..++.++.....+...+.
T Consensus 212 ~~wlp~~L~~-------~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~ 280 (368)
T TIGR00903 212 AIWLEAALRP-------AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNR 280 (368)
T ss_pred HHHHHHHHHH-------CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 3456666654 466654 566655555555554 4677777654 333332 333334444444444444
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHH
Q 016882 148 IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (381)
Q Consensus 148 ~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~ 227 (381)
...+++-.+.|++.....+...++.+|.+|++.|+++.|+.+....+|+.++|.+.+.+.. +-+..|.+.+++.++.
T Consensus 281 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~i~ 357 (368)
T TIGR00903 281 LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---SAEAYFTFLAILITIA 357 (368)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 4555566677777777778788999999999999999999999999999999999988773 5667777777777776
Q ss_pred HHHHhhccc
Q 016882 228 GMGMWWLPA 236 (381)
Q Consensus 228 ~~~~~~~~~ 236 (381)
.+..+++++
T Consensus 358 ~~~~~~~~~ 366 (368)
T TIGR00903 358 FAIALLLPN 366 (368)
T ss_pred HHHHHhCCC
Confidence 555544454
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.98 E-value=6.4e-09 Score=96.56 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=90.0
Q ss_pred ccCChhHHHHHHHHHH-HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-----------chHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSL-YGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----------PDFIIMVVGRFV 156 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~~r~l 156 (381)
+|.+..+.+.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++..+..+. ++.+.+..+.++
T Consensus 239 ~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (356)
T TIGR00901 239 MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITL 318 (356)
T ss_pred cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHH
Confidence 6889999998887765 6788999999999999999999998888877766655443 456778888899
Q ss_pred HHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHH
Q 016882 157 FGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIV 193 (381)
Q Consensus 157 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 193 (381)
.+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 319 EAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 9999999999999999999999999999999877654
No 199
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.98 E-value=8.8e-09 Score=97.45 Aligned_cols=136 Identities=10% Similarity=-0.003 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH-Hh-----chHHHHHHHHHHHHHHHhhHhHHHHHHH
Q 016882 99 ITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA-LA-----PDFIIMVVGRFVFGIGIGLAMHAAPMYI 172 (381)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~-~~-----~~~~~~~~~r~l~G~~~g~~~~~~~~~~ 172 (381)
...+..+...+..+++|+++||+|+|+++.++.++..++..... .. .+++.+.+..+...++.|........++
T Consensus 291 ~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~i 370 (462)
T PRK15034 291 LAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMI 370 (462)
T ss_pred HHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhh
Confidence 34455678889999999999999999999988887776654322 22 2466666655555555565666666677
Q ss_pred HhhCCc---------------------ccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHH
Q 016882 173 AETAPT---------------------PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 173 ~~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~ 231 (381)
.+++|+ ++-|.+.|+......+|+.+.|.+-+...+..+++...|++..+..++++++.
T Consensus 371 p~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 450 (462)
T PRK15034 371 AVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLT 450 (462)
T ss_pred HHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 777774 25678889999999999999998888888877789999999999988877766
Q ss_pred hhc
Q 016882 232 WWL 234 (381)
Q Consensus 232 ~~~ 234 (381)
++.
T Consensus 451 w~~ 453 (462)
T PRK15034 451 WLV 453 (462)
T ss_pred HHH
Confidence 653
No 200
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.97 E-value=6e-09 Score=96.16 Aligned_cols=112 Identities=31% Similarity=0.440 Sum_probs=98.6
Q ss_pred ccCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLS-SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~ 164 (381)
+|.+ ..+.+++.++..++..++.++.|++.||+|+|+.+.+......+..+..... ++....++..++.|++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 316 (352)
T PF07690_consen 237 LGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIV 316 (352)
T ss_dssp HHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 7888 7899999999999999999999999999999888877777776666655543 35577777888999999999
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHH
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY 200 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 200 (381)
.+....++.|..|+++||++.++.+....+|..++|
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 317 FPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999999999987
No 201
>PRK10133 L-fucose transporter; Provisional
Probab=98.97 E-value=2.9e-08 Score=94.83 Aligned_cols=139 Identities=9% Similarity=-0.033 Sum_probs=111.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|+++.+.++..+.+.++..++.++.+++.||+|+|+++..+.++..++.++..+.++.+ .+..-.+.|++.+..+|..
T Consensus 290 ~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P~~ 368 (438)
T PRK10133 290 PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYPTI 368 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999999999988877777666666655543 3456678999999999999
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHH
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~ 230 (381)
.+...+..|+ +.+.+.++... ..+|..++|++.+.+.+..++-|..|++..+..+..+..
T Consensus 369 ~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 369 FSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 9999998875 46777887764 446888888999998887622788887666655544433
No 202
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.96 E-value=1e-08 Score=99.66 Aligned_cols=121 Identities=18% Similarity=0.085 Sum_probs=107.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHhhHh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAM 165 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~~ 165 (381)
+|.++.+.++......++..++.++.|++.||+|+|+.+..+.++..++.++.... ++.+...+..++.|+|.|...
T Consensus 290 ~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~ 369 (495)
T PRK14995 290 HGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASAL 369 (495)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHH
Confidence 58899999999999999999999999999999999999998888887776655442 356666778899999999998
Q ss_pred HHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 166 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+.
T Consensus 370 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 370 LASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999988643
No 203
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.96 E-value=2.4e-08 Score=94.05 Aligned_cols=129 Identities=16% Similarity=0.170 Sum_probs=89.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
+|.+..+.+.+.+...++..++.++.+++.||+|||+.+.++..+..++.+...+.++.+..+++-.+.+.|.+...+.
T Consensus 234 ~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~- 312 (392)
T PRK10473 234 MGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV- 312 (392)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-
Confidence 6889999999999999999999999999999999999999999888888887777666555555555555554444333
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHH
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~ 223 (381)
....+..|.++|+ +.......++..+++.+++++.+.. |+.....+.+.+
T Consensus 313 -~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~-g~~~~~~~~~~~ 362 (392)
T PRK10473 313 -AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL-GISAWNMLIGIL 362 (392)
T ss_pred -HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHH
Confidence 3334555655543 3333445566666666666666554 555444444443
No 204
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.94 E-value=1.6e-08 Score=96.42 Aligned_cols=115 Identities=21% Similarity=0.255 Sum_probs=104.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHhhHhHHHHHH
Q 016882 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMHAAPMY 171 (381)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (381)
...+.+..+..++..++.+++++++||+|+|+.+..+..+.+++.++..+.+ +.+.+++..++.|++.+...+...++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5678888899999999999999999999999999999999999999888876 89999999999999999999999999
Q ss_pred HHhhCC-------cccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 172 IAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 172 ~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
++|..+ +++.|...++......+|..+++.+.+.+.+
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 999887 3556899999999999999999999888875
No 205
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.93 E-value=5.2e-08 Score=86.95 Aligned_cols=178 Identities=24% Similarity=0.173 Sum_probs=137.2
Q ss_pred CchhHHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-c
Q 016882 44 NYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-G 122 (381)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-G 122 (381)
-|+.+..|.+.+...+-++.++.... .+|.+..| -|+|..+.|++.+...+....+++....+.+|. .
T Consensus 204 vw~~~~aW~vtLfmGlqS~~~Y~~~~----WLP~ili~-------~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n 272 (395)
T COG2807 204 VWRSPLAWQVTLFMGLQSLLYYIVIG----WLPAILID-------RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKN 272 (395)
T ss_pred cccCchhHHHHHHHHhhHHHHHHHHH----HHHHHHHH-------cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45555566665555555555444444 46776666 699999999999999999999999999999965 5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCC-cccchhHHhHHHHHHHHHHHHHHH
Q 016882 123 RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYG 201 (381)
Q Consensus 123 rk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~ 201 (381)
+|+.......+..++.+.+.+.+.-..+.- -++.|+|.|..++....++.+..+ +++-++..++.|....+=..+||.
T Consensus 273 ~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 273 QRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhh
Confidence 777777778877777777777654322222 489999999999999999988775 456667778888888888899999
Q ss_pred HHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 202 IGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 202 ~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
+.|++.|..++|+...+..+...+.+.+.-+.
T Consensus 352 l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 352 LFGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999988888887776554443
No 206
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.92 E-value=3e-07 Score=86.20 Aligned_cols=120 Identities=25% Similarity=0.328 Sum_probs=103.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+|-++....+.......+..++.+++.++++|+|+|+++.++.++..++.++..+.+ +.+.+++..++.++|.+...+
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 455677777888888888888899999999999999999999999999999888865 788888999999999999999
Q ss_pred HHHHHHHhhCC-------cccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 167 AAPMYIAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 167 ~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
..+++++|..+ .|.-|...+......-+|..++..+.++...
T Consensus 347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988764 4556778888888889999999988888774
No 207
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.88 E-value=4.1e-08 Score=93.07 Aligned_cols=133 Identities=21% Similarity=0.255 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccc
Q 016882 102 GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR 181 (381)
Q Consensus 102 ~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r 181 (381)
...+...+.++..|.++||+|||..+.+.++...+..+...+.. +|.++ .--+.| +.+.......++++|....++|
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~-~~~l~g-~~~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL-LLGLSG-GFSAIFSVGFAYVADISSEEER 146 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh-hccccc-chhhhhhhhhhheeeccchhHH
Confidence 34677788999999999999999999999888887776666654 44433 222222 2344677788999999999999
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH-HHhhcccch
Q 016882 182 GQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM-GMWWLPASP 238 (381)
Q Consensus 182 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~-~~~~~~~~~ 238 (381)
....|+....+..+..++|.+++.+.... |.-..|.+..+..++..+ ..+++||+-
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 99999999999999999999999999886 888889988888887654 445578874
No 208
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.86 E-value=8.7e-08 Score=85.95 Aligned_cols=155 Identities=33% Similarity=0.493 Sum_probs=120.0
Q ss_pred ccccccccccccccCCCCCCCccccCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 016882 66 YDIGSTSCATISIESPTLSGISWYDLSS--VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (381)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~ 143 (381)
+.........+....+ ++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++..+
T Consensus 16 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 88 (338)
T COG0477 16 LDLGLLSPALPLLLST-------LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL 88 (338)
T ss_pred HhcchHHHHHHHHHHH-------cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh
Confidence 3444444444444443 34344 47899999999999999999999999999998888888765666666767
Q ss_pred hch--HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCc-ccchhHHhHHHH-HHHHHHHHHHHHHHHhhcc-cchhHHHHH
Q 016882 144 APD--FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPT-PMRGQLISLKEF-FIVLGMVGGYGIGSLLVDL-VAGWRYMYG 218 (381)
Q Consensus 144 ~~~--~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~-~~~w~~~f~ 218 (381)
..+ .+.+++.|++.|++.+...+....++.|+.|+ ++|+...+.... ...+|..+++.+++.+... ..+||+.|.
T Consensus 89 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (338)
T COG0477 89 APNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFL 168 (338)
T ss_pred CccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 665 89999999999999999999999999999998 678999998887 5888888888777766644 237998666
Q ss_pred hhHHHHHHH
Q 016882 219 ASTPLAVIM 227 (381)
Q Consensus 219 i~~~~~~~~ 227 (381)
+........
T Consensus 169 ~~~~~~~~~ 177 (338)
T COG0477 169 LAALLGLLL 177 (338)
T ss_pred HHHHHHHHH
Confidence 666665443
No 209
>PRK11043 putative transporter; Provisional
Probab=98.85 E-value=1.5e-07 Score=88.94 Aligned_cols=120 Identities=16% Similarity=0.133 Sum_probs=95.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH---H--hchHHHHHHHHHHHHHHHhh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---L--APDFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~---~--~~~~~~~~~~r~l~G~~~g~ 163 (381)
+|.+..+.++......++..++.++.+++.||+|+|+.+....+..+++.+... . .++.+.+++...+.|++.+.
T Consensus 233 ~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (401)
T PRK11043 233 MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGA 312 (401)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHH
Confidence 688999999988888899999999999999999999877665555444433222 2 24555566677788888888
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
..+.......+..| ++|+++.++.+.....+...++.+.+.+.+.
T Consensus 313 ~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 313 IYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 88888888777776 6799999999998888888999998888764
No 210
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.85 E-value=3.8e-08 Score=84.69 Aligned_cols=123 Identities=19% Similarity=0.116 Sum_probs=100.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH-HHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL-YLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+|+|+...+.+.+......++.++++|.++||+|++...+.+..+ ...+.....+ +.+.=+++..+.|+.....-..
T Consensus 295 fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcs 372 (459)
T KOG4686|consen 295 FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACS 372 (459)
T ss_pred hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHH
Confidence 899999999999999999999999999999999999887765443 3444444444 3333455667788877766666
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchh
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 213 (381)
.+..++-+.|+++.|++.|..+...++|-.+.|.+++.+.++.+++
T Consensus 373 lWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y 418 (459)
T KOG4686|consen 373 LWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSY 418 (459)
T ss_pred HhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCch
Confidence 7778888999999999999999999999999999999999876443
No 211
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.84 E-value=2.3e-07 Score=86.74 Aligned_cols=116 Identities=17% Similarity=0.153 Sum_probs=85.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH---Hh-chHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---LA-PDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~---~~-~~~~~~~~~r~l~G~~~g~~ 164 (381)
+|.++.+.+++.++..++..++.++.|++.||+|||+.+.++.++..+..+... .. .+++.+.++-.+.+.+.+..
T Consensus 225 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T PRK11102 225 NGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMI 304 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 588999999999999999999999999999999999999888776544333222 22 24555555555555555555
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHH-HHHHHHHHHHHHHHH
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSL 205 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~ 205 (381)
......++.|..| ++++++.++.+. ...+|..+++.++..
T Consensus 305 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 305 SSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred hHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6666667778776 788999998754 456777777776543
No 212
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.84 E-value=1.8e-07 Score=90.79 Aligned_cols=137 Identities=12% Similarity=0.060 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHhhchHHHHHHHHHHHHHHHHHHHHhch---------HHHHHHHHHHHHHHHh
Q 016882 96 IGLITSGSLYGALIGSILA----FNIADILGRRRELILAALLYLVGALVTALAPD---------FIIMVVGRFVFGIGIG 162 (381)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~----g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~l~G~~~g 162 (381)
.+++.++..+...+..++. +++.+|++.++.+.+|+++.+++.+..+...+ .+++.+.+++.|+|.+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4555666666666666665 55666666678888999999999888777654 4678899999999999
Q ss_pred hHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc---------ccchhHHHHHhhHHHHHHHHHHHh
Q 016882 163 LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD---------LVAGWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------~~~~w~~~f~i~~~~~~~~~~~~~ 232 (381)
...|...+++.+..|++.||+++|++.....+|..++..+...... ..++..+.|...++.+++..++.+
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988888888888777653221 112467888877777665444333
No 213
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.83 E-value=6.8e-08 Score=92.97 Aligned_cols=147 Identities=15% Similarity=0.134 Sum_probs=118.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh----------chHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA----------PDFIIMVVGRFVFG 158 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l~G 158 (381)
+|.++.+.|.+.....++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+.+....++.+
T Consensus 283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~ 362 (468)
T TIGR00788 283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAE 362 (468)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHH
Confidence 79999999999999999999999999999999999999999999988877554311 33344556678889
Q ss_pred HHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccch-----hHHHH---HhhHHHHHHHHHH
Q 016882 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG-----WRYMY---GASTPLAVIMGMG 230 (381)
Q Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-----w~~~f---~i~~~~~~~~~~~ 230 (381)
++.+........++.+..|++.+|+..++.+...++|..+++.+++.+.+.. | ++..+ .+..+..++.+..
T Consensus 363 ~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~-g~~~~~~~~~~~~i~i~~~~~l~~l~~ 441 (468)
T TIGR00788 363 VLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI-GITCDNSNNLWLLILGHSLAPLLPLPL 441 (468)
T ss_pred HHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988755 3 33333 2333334444444
Q ss_pred Hhhccc
Q 016882 231 MWWLPA 236 (381)
Q Consensus 231 ~~~~~~ 236 (381)
.+++|+
T Consensus 442 ~~llP~ 447 (468)
T TIGR00788 442 LHLLPR 447 (468)
T ss_pred HHhCCC
Confidence 456786
No 214
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.83 E-value=1.1e-06 Score=80.33 Aligned_cols=232 Identities=13% Similarity=0.095 Sum_probs=148.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----hHHHHH-HHHHHHHHHHHHHHHh-----c-------h--HH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELI-LAALLYLVGALVTALA-----P-------D--FI 148 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-----rk~~l~-~~~~~~~~~~~~~~~~-----~-------~--~~ 148 (381)
++++..-.+.+.++..+... ..+.+|..+|+.+ ||..++ .|.++...+..+.+++ . + .+
T Consensus 10 L~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g 88 (403)
T PF03209_consen 10 LGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLG 88 (403)
T ss_pred hccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHH
Confidence 78888888888888777665 5889999999998 776555 4566655555554442 2 1 22
Q ss_pred --HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 149 --IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 149 --~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
...++..+.|+|.+.......+++.|..|+++|+++.++.+....+|.+++..+.+.+.+.+..-|..-.+..+..+.
T Consensus 89 ~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~ 168 (403)
T PF03209_consen 89 LALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIA 168 (403)
T ss_pred HHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHH
Confidence 344566788999999999999999999999999999999999999999999999999998764445444433333222
Q ss_pred --HHHHHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhcccc
Q 016882 227 --MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGK 304 (381)
Q Consensus 227 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (381)
..++..+-.|+++. ... +..++++..-...+++++.++
T Consensus 169 ~~l~~ia~wg~E~r~~-~~~---------------------------------------~~~~~~~~~f~~a~~~~~~~~ 208 (403)
T PF03209_consen 169 LLLNLIALWGQEPRRS-RRA---------------------------------------AAAERPRPPFREAWRQVWASP 208 (403)
T ss_pred HHHHHHHHHhcccCCc-ccc---------------------------------------cCCCCCCccHHHHHHHHHhCC
Confidence 22233333332210 000 000001122234456666677
Q ss_pred chHHHHHHHHHHHHHHhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 016882 305 CLKALIIGAGLVLFQQITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFF 365 (381)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 365 (381)
.-++++..+++..+..+. --...=||=-+.+|+ +..+.+..+...+...++|..+.-
T Consensus 209 ~a~~f~~fl~l~t~a~~~---QD~iLEPygg~Vfgm-sv~eTT~Lta~~~~G~L~G~~~~g 265 (403)
T PF03209_consen 209 QARRFFVFLFLGTLAFFM---QDVILEPYGGEVFGM-SVGETTRLTAFWGGGTLLGMLLAG 265 (403)
T ss_pred ChhHHHHHHHHHHHHHHh---hHHHcCCchhHHcCC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655544443332111 111122443445688 788888888888888888876643
No 215
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.81 E-value=2e-07 Score=89.99 Aligned_cols=136 Identities=18% Similarity=0.157 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhch-----HHHH--HHHHHHHHHHHHHHHH---------hchHHHHHHHHHHHHH
Q 016882 96 IGLITSGSLYGALIGSILAFNIADILGR-----RREL--ILAALLYLVGALVTAL---------APDFIIMVVGRFVFGI 159 (381)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-----k~~l--~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~ 159 (381)
.+++.++..+...+.+++..++-.|.+| +... .+|+++.+++....++ ..+++++++..++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6788888888888888886654444443 3333 6788888888777764 3589999999999999
Q ss_pred HHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHh
Q 016882 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 160 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~ 232 (381)
|.....|...+++.+..|++.||+.+|++.....+|..+++.+........ +|.+.|...++..++..++.+
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ-GVTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988876665 788888887777766554443
No 216
>PRK11462 putative transporter; Provisional
Probab=98.78 E-value=9.6e-07 Score=84.91 Aligned_cols=115 Identities=22% Similarity=0.194 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHhhHhHHHHHH
Q 016882 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMHAAPMY 171 (381)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (381)
...+.+.+.+.++.+++.+++++++||+|+|+.+..+..+.++..++..+.+ +.+.+++.-++.|++.+...+...++
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677788889999999999999999999988765554444333333322 23344555567788877777777778
Q ss_pred HHhhCC-------cccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 172 IAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 172 ~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
++|..+ ++..|...+.......+|..+++.+++.++.
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887766 4444555677778888899999988888774
No 217
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.77 E-value=4.6e-06 Score=82.78 Aligned_cols=145 Identities=16% Similarity=0.227 Sum_probs=118.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHhch--------HHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPD--------FIIMVVGRFVFGI 159 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grk~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~r~l~G~ 159 (381)
+|++......+...+....-+..+++|+++|+ +||++.+.++.++..++.++.++... ....+++-.+..+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 68888888889999988999999999999996 69999999999999999888776421 2335567778888
Q ss_pred HHhhHhHHHHHHHHhhCCcc---cchhHHhHHHHHHHHHHHHHHHHHHHhhccc------chhHHHHHhhHHHHHHHHHH
Q 016882 160 GIGLAMHAAPMYIAETAPTP---MRGQLISLKEFFIVLGMVGGYGIGSLLVDLV------AGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 160 ~~g~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------~~w~~~f~i~~~~~~~~~~~ 230 (381)
|.|+.-+...+...|.++++ +|.....++..+.++|+.+++++...+.+.. .+|...|.+.++..++.++.
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999754 3667788888999999999999999887432 26999999999998887665
Q ss_pred Hhh
Q 016882 231 MWW 233 (381)
Q Consensus 231 ~~~ 233 (381)
...
T Consensus 178 f~~ 180 (654)
T TIGR00926 178 FMA 180 (654)
T ss_pred HHH
Confidence 544
No 218
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.76 E-value=3.2e-07 Score=86.88 Aligned_cols=134 Identities=8% Similarity=-0.014 Sum_probs=103.3
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (381)
+.+....+...+.+..+..+|.++++++.||+++|+++.+...+.++..++....++... ..+-++.|++.+..+|...
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~ 343 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIY 343 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 445555566677777888999999999999999999999988888888888888776544 5666788888888999999
Q ss_pred HHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc-----chhHHHHHhhHHHHHH
Q 016882 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV-----AGWRYMYGASTPLAVI 226 (381)
Q Consensus 170 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----~~w~~~f~i~~~~~~~ 226 (381)
+...+..+++.+....++... .+|+.+.|++.+.+.+.. ++.+..|++..++-+.
T Consensus 344 sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 344 GIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 999999986664434444333 399999999999999843 3577788775555443
No 219
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.76 E-value=1.2e-08 Score=95.26 Aligned_cols=144 Identities=17% Similarity=0.155 Sum_probs=130.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
++..+.-.|........+-++.-++.+++.+|+|+-+++.+++....+=.+..+...|.|..+...+++|+..+..+...
T Consensus 401 ~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 401 LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHH
Confidence 46566667777888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCcccchhHHhHHH-HHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 016882 169 PMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
.+|++...|++.|.++.++.+ ...++|-.+|.++++.+.+.+ +-|..|.+.++.+++.+++...
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-g~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-GARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee-hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999975 578899999999999999988 8899999999988886665554
No 220
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.73 E-value=7.4e-09 Score=94.82 Aligned_cols=180 Identities=15% Similarity=-0.002 Sum_probs=125.0
Q ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHH--------HHHH-HHHHHHHHHHHHHHHHHhhc
Q 016882 52 LPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGL--------ITSG-SLYGALIGSILAFNIADILG 122 (381)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~g~l~d~~G 122 (381)
..++..+..+|+.-......+.....+.+. .|+.+.+... ...+ ...++..|..+...+.|++|
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~-------ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG 376 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-------IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG 376 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHh-------hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh
Confidence 344556666666555555555555555443 2332222111 1111 12223335556667899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhch----HHHHHHHHHHHHH-HHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHH
Q 016882 123 RRRELILAALLYLVGALVTALAPD----FIIMVVGRFVFGI-GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV 197 (381)
Q Consensus 123 rk~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~r~l~G~-~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 197 (381)
||+..+.|.+++++..+..+...| -..++++..+..+ +.-+.......+.+|.+|.+.|++..|+.....-+|++
T Consensus 377 Rk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAi 456 (538)
T KOG0252|consen 377 RKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAI 456 (538)
T ss_pred hHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHH
Confidence 999999999999999888887665 2223333333332 22333445566779999999999999999999999999
Q ss_pred HHHHHHHHhhc-----ccchhHHHHHhhHHHHHHHHHHHhhcccchh
Q 016882 198 GGYGIGSLLVD-----LVAGWRYMYGASTPLAVIMGMGMWWLPASPR 239 (381)
Q Consensus 198 ~~~~~~~~l~~-----~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~ 239 (381)
++...-.++.+ .. +.|+.|++.+.++++..+..+++||+.+
T Consensus 457 vg~~~F~~~t~~~yp~~~-g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 457 VGAFGFLYLTDHNYPPNI-GVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred HHHHHhhHhhhccCCccc-cchHHHHHHHHHHHHhHheeEEeecccc
Confidence 99999999987 54 8999999999999999999999999864
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.72 E-value=8.8e-08 Score=91.18 Aligned_cols=173 Identities=13% Similarity=0.090 Sum_probs=120.7
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhch---------H
Q 016882 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR---------R 124 (381)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr---------k 124 (381)
+..+.++.+...+....+....|.+.++. +|++-.+.|++.++..+...+..+++|.++||.-+ |
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~V------L~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rk 333 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEV------LGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRK 333 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHH------hCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHH
Confidence 45555566666667777777788887764 79999999999999999999999999999998754 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhch--HHHHHHHHHHHHHHH-hhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHH
Q 016882 125 RELILAALLYLVGALVTALAPD--FIIMVVGRFVFGIGI-GLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYG 201 (381)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~r~l~G~~~-g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 201 (381)
..-.++....+++.+..++.++ .+..+++. ..+++. |...+....-..+. .+++-+..+|+.+....+...++|.
T Consensus 334 ifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l-~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~ 411 (466)
T KOG2532|consen 334 IFNTIAFGGPAVFLLVLAFTSDEHRLLAVILL-TIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPL 411 (466)
T ss_pred HHHhHHHHHHHHHHHeeeecCCCcchHHHHHH-HHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334555555666666666552 21222222 222222 22222222222222 4588899999999999999999999
Q ss_pred HHHHhhc--ccchhHHHHHhhHHHHHHHHHHHhhc
Q 016882 202 IGSLLVD--LVAGWRYMYGASTPLAVIMGMGMWWL 234 (381)
Q Consensus 202 ~~~~l~~--~~~~w~~~f~i~~~~~~~~~~~~~~~ 234 (381)
+.+.+.+ ....||+.|++.+++.++..+.+.++
T Consensus 412 ~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 412 LVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred heeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 9999994 23489999999999988876555443
No 222
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.66 E-value=4.2e-06 Score=78.80 Aligned_cols=120 Identities=15% Similarity=0.089 Sum_probs=92.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH-HHHHHHHH--hchHHHHHHHHHHHHHHHhhHh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL-VGALVTAL--APDFIIMVVGRFVFGIGIGLAM 165 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~-~~~~~~~~--~~~~~~~~~~r~l~G~~~g~~~ 165 (381)
+|.+..+.+++.....++..+++++.+++.||++++........+.. +....... ..+.+.+.++.++.|++.+...
T Consensus 238 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 317 (394)
T PRK11652 238 LGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLF 317 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 58888999999999999999999999999999984443322222222 22222222 2356777788899999999999
Q ss_pred HHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 166 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
+...++..|..| ++++...++.+....+|..+++.+++.+...
T Consensus 318 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 318 PLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 999999999987 5789999999999999999999999887654
No 223
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.64 E-value=5.1e-06 Score=76.07 Aligned_cols=143 Identities=20% Similarity=0.206 Sum_probs=120.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHH-hhchHHHHHHHHHHHHHHHHHHHH---hchHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD-ILGRRRELILAALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~Grk~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~ 164 (381)
||++..+...+......|..++-...|++.. |.++|+...+|..+..++..+..+ ..+.+.+...-++.|++.|..
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLF 318 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHH
Confidence 8999999999999999999999999998877 678888887888877776665444 457888999999999999999
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc---------cchhHHHHHhhHHHHHHHHHHH
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL---------VAGWRYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------~~~w~~~f~i~~~~~~~~~~~~ 231 (381)
.....+.+.++..+++.|..+|.+...+.++..++..+++.+.+. ..+|-..|.+.++..++++++.
T Consensus 319 ~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 319 TVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988752 1256667777777766655443
No 224
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.61 E-value=1.6e-06 Score=83.84 Aligned_cols=138 Identities=14% Similarity=0.128 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchHHH-------HHHHHHHHHHHHHHHH-----Hh-----chHHHHHHHHHHHH
Q 016882 96 IGLITSGSLYGALIGSILAFNIADILGRRRE-------LILAALLYLVGALVTA-----LA-----PDFIIMVVGRFVFG 158 (381)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~-------l~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~r~l~G 158 (381)
.+++.+++.+...+.+++.+++.||+++|+. +.+|+++.+++.+..+ .. .+++.+....++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4556666777788889999999999999863 6677777776654321 21 25777888999999
Q ss_pred HHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc---------cchhHHHHHhhHHHHHHHHH
Q 016882 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL---------VAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------~~~w~~~f~i~~~~~~~~~~ 229 (381)
+|.+...+...+++.+..|++.++.++|++.....+|..++..++...... .....+.|...++..+++.+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998888655310 11345677766666665444
Q ss_pred HHhh
Q 016882 230 GMWW 233 (381)
Q Consensus 230 ~~~~ 233 (381)
+.++
T Consensus 471 ~~~~ 474 (489)
T PRK10207 471 VMAL 474 (489)
T ss_pred HHHH
Confidence 4433
No 225
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.60 E-value=1e-07 Score=85.99 Aligned_cols=140 Identities=20% Similarity=0.174 Sum_probs=113.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG--RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G--rk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+..+..+.|+..--..+.+.++..++|.++||++ |-.....+++..+++.....+++++..+++-++..|++.+...+
T Consensus 301 m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~da 380 (464)
T KOG3764|consen 301 MFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADA 380 (464)
T ss_pred ccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHH
Confidence 3433447777777788999999999999999999 54445567777777777888899999999999888888887776
Q ss_pred HHHHHHHhhCCcc------cchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH
Q 016882 167 AAPMYIAETAPTP------MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 167 ~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
........+.+.+ ..|...++...++++|..+||.+++.+.+.. |++|...+.++..++-..
T Consensus 381 sl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i-GF~wl~~iig~~n~iyap 448 (464)
T KOG3764|consen 381 SLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI-GFEWLMTIIGILNLIYAP 448 (464)
T ss_pred HHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh-hHHHHHHHHHHHHHHHHH
Confidence 6666666666543 4468899999999999999999999999998 999999988888877443
No 226
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.59 E-value=7.2e-07 Score=84.88 Aligned_cols=146 Identities=27% Similarity=0.233 Sum_probs=113.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHHHhc----hHHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRRELILAALLYLVGALVTALAP----DFIIMVVGRFVFGI 159 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grk~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~r~l~G~ 159 (381)
+|+++.+...+.++..+.+.+ .++.|.++|.+ .||+-++++.++..++.+.++..+ +.....++-++..+
T Consensus 20 l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~ 98 (433)
T PF03092_consen 20 LGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASF 98 (433)
T ss_pred cCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHH
Confidence 899999999988888777765 56899999976 356666667777766566555533 45666677788888
Q ss_pred HHhhHhHHHHHHHHhhCC--cccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhccc
Q 016882 160 GIGLAMHAAPMYIAETAP--TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 160 ~~g~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 236 (381)
|........-+++.|... ++.||...+.......+|.+++..++|.+.+.. +++..|.+.+++..+.++..++++|
T Consensus 99 g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 99 GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHHHHHhhh
Confidence 999999999999999873 333778888888999999999999999999887 8999999888887776555544433
No 227
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.54 E-value=1.6e-05 Score=72.93 Aligned_cols=233 Identities=13% Similarity=0.084 Sum_probs=149.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHhhHhHH
Q 016882 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRE-LILAALLYLVGALVTALAPD---FIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~-l~~~~~~~~~~~~~~~~~~~---~~~~~~~r~l~G~~~g~~~~~ 167 (381)
+.+..+...++..+..++.+|+.|.++|+.|+||. +-+...+..++.++..+.++ ++..++...+..++..+..+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 34667888899999999999999999999996554 44556666666666666654 555666778889999999999
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhh--c---------------ccchhHHHHHhhHHHHHHHHH-
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV--D---------------LVAGWRYMYGASTPLAVIMGM- 229 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--~---------------~~~~w~~~f~i~~~~~~~~~~- 229 (381)
..+++.+..++++-++..++-.....+|+++.-.+..... . ....-|..+.+.++..++..+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 9999999999988888887766655666655444431111 1 112457777777777665443
Q ss_pred HHhhcccchhHHHHhhccccCcchhhHHHHHHHHHHHhCCCCCCCChhhHHHHHHhhhhccccccccchhhccccchHHH
Q 016882 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (381)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (381)
.+++.++.++-. .+ + .....+- -++-+.+++++.++++....
T Consensus 216 m~~~v~~~~~~~--~~------------~-----------------~~~l~~g-------~k~L~~t~k~i~~~~~i~~F 257 (438)
T COG2270 216 MILNVHDAEKIS--SP------------P-----------------PTALRNG-------FKELKSTFKEIRGRKNLVLF 257 (438)
T ss_pred HHhccccccccc--cc------------c-----------------hHHHHHH-------HHHHHHHHHHHhcccchHHH
Confidence 444455543200 00 0 0000000 11113445566555433333
Q ss_pred HHHHHHHHHHHhhchhHHHhcHHHHHH-HcCCCCCchhHHHHHHHHHHHHHHhHHHHHH
Q 016882 310 IIGAGLVLFQQITGQPSVLYYAASILQ-SAGFSAASDATRVSILLGLFKVGSCTLFFMS 367 (381)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 367 (381)
++ ..+...-|.+.+......+-. ++|+ ++.+-.......++.+++|++++-+.
T Consensus 258 Li----A~~~~~DGv~til~~~~~fg~~~~gl-s~~~lll~g~~~~vvA~lg~ii~g~L 311 (438)
T COG2270 258 LI----ARFFYIDGVNTILAMGGVFGAADLGL-SSTELLLIGIALSVVAALGAIIAGFL 311 (438)
T ss_pred HH----HHHHHHhhHHHHHHHHHHHHHHHcCc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 233334566777777777766 6799 77888888889999999999886644
No 228
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.53 E-value=2e-07 Score=86.71 Aligned_cols=106 Identities=21% Similarity=0.187 Sum_probs=82.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh--c--hHHHHHHHHHHHHHHHhhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--P--DFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~--~--~~~~~~~~r~l~G~~~g~~ 164 (381)
+|.+..+.+++.++..++..++.++.|++.||+|||+.+..+..+...+..+..+. . +.+.+.+...+.+++.|..
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (366)
T TIGR00886 256 FGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAG 335 (366)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccc
Confidence 68899999999999999999999999999999999988887776666655555432 2 5555555556666666666
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHHHHHHH
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLG 195 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 195 (381)
.+....++.+..| +++|..+|+.+....+|
T Consensus 336 ~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 336 NGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred cchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 6667778888887 68999999988776654
No 229
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.50 E-value=2.7e-06 Score=68.27 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhC
Q 016882 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (381)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 176 (381)
-.-.++.+....+++++.+.+.+++|.|+.+++|.+...+-.... +-++.+.++.+-.+.|++.+..++....++.+..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 334556667778888899999999999999999999888654433 4567888999999999999999999999999999
Q ss_pred CcccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 177 PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 177 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
+++.|++..+++......+.++|..+...+.+
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998888887766543
No 230
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.49 E-value=4.7e-10 Score=107.63 Aligned_cols=148 Identities=22% Similarity=0.184 Sum_probs=97.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH--H--hchH-----HHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA--L--APDF-----IIMVVGRFVFGI 159 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~--~--~~~~-----~~~~~~r~l~G~ 159 (381)
.+.+.. -.......+...++.++...+.||+|||+.++.+..+..++.+..+ . .++- ...+++-.+..+
T Consensus 283 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~ 360 (451)
T PF00083_consen 283 AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFA 360 (451)
T ss_pred cccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccc
Confidence 455544 2233344455566777777999999999999999888887777664 1 1111 111112222222
Q ss_pred HHh-hHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHH-HHHHHHhhcccc
Q 016882 160 GIG-LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV-IMGMGMWWLPAS 237 (381)
Q Consensus 160 ~~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~-~~~~~~~~~~~~ 237 (381)
+.+ +..+....+..|.+|.+.|+++.++......++..+++.+...+.+..+++ ..+++.+++++ ..++..+++||+
T Consensus 361 ~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~-~~~~i~~~~~~i~~i~~~~~lpET 439 (451)
T PF00083_consen 361 FFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGW-GVFLIFAGVCLIAIIFVYFFLPET 439 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccchhhHHHHHHHHhheeEEEeeC
Confidence 222 344566688899999999999999999988999999998888877765224 34444444444 455666779998
Q ss_pred hh
Q 016882 238 PR 239 (381)
Q Consensus 238 ~~ 239 (381)
.+
T Consensus 440 ~g 441 (451)
T PF00083_consen 440 KG 441 (451)
T ss_pred CC
Confidence 54
No 231
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.48 E-value=0.00018 Score=68.48 Aligned_cols=116 Identities=6% Similarity=-0.034 Sum_probs=89.5
Q ss_pred ChhHHHHHHHHHHHHHHHH-HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh--c-----------------------
Q 016882 92 SSVEIGLITSGSLYGALIG-SILAFNIADILGRRRELILAALLYLVGALVTALA--P----------------------- 145 (381)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~--~----------------------- 145 (381)
..+...++-+...+...+. .++.+++++|++|++.+.+....+.....++++. +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3467888888877766666 8999999999999999888766666655555543 1
Q ss_pred ------hHHHHHHHHHHHHHHHhhHhH-HHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhh
Q 016882 146 ------DFIIMVVGRFVFGIGIGLAMH-AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (381)
Q Consensus 146 ------~~~~~~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 207 (381)
+.|...+......+-.....+ ..+.+++|.++.++-.+..++...+.++|..+++.+...+.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123334444555555555555 78999999999999999999999999999999999998887
No 232
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.48 E-value=1.2e-06 Score=85.08 Aligned_cols=146 Identities=20% Similarity=0.253 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHhhHhHHHHHH
Q 016882 95 EIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALA--PDFIIMVVGRFVFGIGIGLAMHAAPMY 171 (381)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-k~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (381)
..++......++..+++++.|.+..+++| |..++++.+++.++.-+++.. +|....+..-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 57888888999999999999999998887 445556766666544444432 455566677889999999888888888
Q ss_pred HHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc-------------------------------------------
Q 016882 172 IAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------------------------------------------- 208 (381)
Q Consensus 172 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------------------------------------------- 208 (381)
..-..|.++-+.+.++....-.+|+.+|..+...+..
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~i 509 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAI 509 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhC
Confidence 8888899999999999999999988888777654442
Q ss_pred ------------------ccchhHHHHHhhHHHHHHHHHHHhhcccchhH
Q 016882 209 ------------------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240 (381)
Q Consensus 209 ------------------~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~ 240 (381)
...++|+.|+....++++.++..+++++..++
T Consensus 510 PGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~~ 559 (599)
T PF06609_consen 510 PGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDKY 559 (599)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHh
Confidence 01268999999999999999999999876544
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.47 E-value=6.5e-06 Score=78.64 Aligned_cols=142 Identities=13% Similarity=0.024 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHhch---------------------HHHHHHHH
Q 016882 97 GLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALAPD---------------------FIIMVVGR 154 (381)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~d~~Gr-k~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~r 154 (381)
.+....+.+...+.+++..++.+|+|+ |+...++.++.+++.....+.++ .+..++..
T Consensus 308 ~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (477)
T TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVF 387 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHH
Confidence 344555666667888888999999994 77778888888888877765443 36677888
Q ss_pred HHHHHHHhhHhHHHHHHHHhhCCc--ccchhHHhHHHHHHHHHHHHHHHHHHHhhcccc-hhHHHHHhhHHHHHHHHHHH
Q 016882 155 FVFGIGIGLAMHAAPMYIAETAPT--PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-GWRYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 155 ~l~G~~~g~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~w~~~f~i~~~~~~~~~~~~ 231 (381)
.+.|+..+.....-.+++++..++ ++.|..+|+.+.+..+.+++..+..+.+.+..+ +-.+++.+.++..++..++.
T Consensus 388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHH
Confidence 899999999999999999999995 556999999999999999999988887554432 45678888888888865555
Q ss_pred h-hcccch
Q 016882 232 W-WLPASP 238 (381)
Q Consensus 232 ~-~~~~~~ 238 (381)
+ .+|+++
T Consensus 468 ~~~~~~~~ 475 (477)
T TIGR01301 468 LILLPRPR 475 (477)
T ss_pred HHhCCCCC
Confidence 4 477654
No 234
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.44 E-value=1e-05 Score=79.07 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=96.2
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchH-------------HHHH-HHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF-------------IIMV-VGRF 155 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~-------------~~~~-~~r~ 155 (381)
|.+... .+...+..+...++..++..+.||+|||+.++.+...+.++.++.+..... ..+. ++-+
T Consensus 326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (513)
T KOG0254|consen 326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLF 404 (513)
T ss_pred CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHH
Confidence 444333 555666777777888888999999999999999999999999887764211 1111 2222
Q ss_pred HHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH-HH-HHHhh
Q 016882 156 VFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MG-MGMWW 233 (381)
Q Consensus 156 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~-~~-~~~~~ 233 (381)
+..+. .+..+....+.+|.+|.+.|+.+.++......+...+-......+.+.. ++...|.+.+..+.+ .. ...++
T Consensus 405 v~~f~-~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~-~~~~~f~~f~~~~~~~~~~fv~~~ 482 (513)
T KOG0254|consen 405 IFSFA-IGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL-GIGGTFGYFGGICLLSLIIFVFFF 482 (513)
T ss_pred HHHHh-cccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHHHheEE
Confidence 23332 3344555678899999999999999987766666655544444444443 334555555555444 33 45566
Q ss_pred cccchh
Q 016882 234 LPASPR 239 (381)
Q Consensus 234 ~~~~~~ 239 (381)
.||+..
T Consensus 483 ~pETkg 488 (513)
T KOG0254|consen 483 VPETKG 488 (513)
T ss_pred cccCCC
Confidence 899854
No 235
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.43 E-value=7.9e-06 Score=74.34 Aligned_cols=157 Identities=13% Similarity=0.088 Sum_probs=121.4
Q ss_pred hhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 016882 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~ 141 (381)
|++.-.....+..++.+..+. .|++..+.....+.+..+.++|.+++.++..|+...|.+.+..+...+.++..
T Consensus 246 FlYVG~Eva~gsfl~~y~~~~------~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~ 319 (422)
T COG0738 246 FLYVGAEVAIGSFLVSYLEEL------LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAV 319 (422)
T ss_pred HHHHhHHHHHHHHHHHHHHhc------CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 444444455555566655431 58899999999999999999999999999999999999999988888888888
Q ss_pred HHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhH
Q 016882 142 ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAST 221 (381)
Q Consensus 142 ~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~ 221 (381)
+++++...++ +-++.|+..+..+|...+...+..| ++ ....+..-....+|+.+.|.+.|++.+.. +-...+.+..
T Consensus 320 ~l~~g~v~~~-~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~-g~~~~~~~~p 395 (422)
T COG0738 320 ALIGGVVALY-ALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMF-GIQLTFLIVP 395 (422)
T ss_pred HHhcChHHHH-HHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhh-hhHHHHHHHH
Confidence 8888865544 4467888899999999999999998 33 44445555556789999999999999987 6666666444
Q ss_pred HHHHHHH
Q 016882 222 PLAVIMG 228 (381)
Q Consensus 222 ~~~~~~~ 228 (381)
.+|.+.+
T Consensus 396 llc~lyV 402 (422)
T COG0738 396 LLCYLYV 402 (422)
T ss_pred HHHHHHH
Confidence 4444433
No 236
>PTZ00207 hypothetical protein; Provisional
Probab=98.41 E-value=1.6e-05 Score=77.72 Aligned_cols=142 Identities=10% Similarity=-0.042 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh---------hchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHH
Q 016882 99 ITSGSLYGALIGSILAFNIADI---------LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (381)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~l~d~---------~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (381)
+.++..++..+|.+..|.+... +.|--.+.+..+ +.++.+++++.-....+++..++.|++.|..+++..
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~ 474 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIA 474 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHH
Confidence 6778888888888888877722 222223334444 556666666654436899999999999999999999
Q ss_pred HHHHhhCCcccchhHHhHHHHHHHHHHHHH-HHHHHHhhcccc------------hhHHHHHhhHHHHHHHHHHHhh-cc
Q 016882 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGG-YGIGSLLVDLVA------------GWRYMYGASTPLAVIMGMGMWW-LP 235 (381)
Q Consensus 170 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~~~~~l~~~~~------------~w~~~f~i~~~~~~~~~~~~~~-~~ 235 (381)
..++|+|. |+-|+...+......+|..+- ..+.|.+.+... =.|..|++.+.++++.+++... .-
T Consensus 475 ~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~ 553 (591)
T PTZ00207 475 LVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHL 553 (591)
T ss_pred HHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheee
Confidence 99999999 888999999999999998776 566776664321 2678899998888886655443 33
Q ss_pred cchhHHH
Q 016882 236 ASPRWLL 242 (381)
Q Consensus 236 ~~~~~~~ 242 (381)
++.+++.
T Consensus 554 R~r~~y~ 560 (591)
T PTZ00207 554 QYRRLCL 560 (591)
T ss_pred ehHHHHH
Confidence 4444443
No 237
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.29 E-value=2.7e-06 Score=60.05 Aligned_cols=80 Identities=23% Similarity=0.241 Sum_probs=71.8
Q ss_pred hcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 016882 64 YGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (381)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~ 143 (381)
.|+.+..+.+.+|.+.++ .++|.++.+++.+.+++||.+|++...++.++..+++.+..+.+...+....+++
T Consensus 4 mGigRFayTplLP~M~~~-------~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQAD-------GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred hhhHHHHHHhHhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 355667778889999988 7999999999999999999999999999999988899999999999999999999
Q ss_pred hchHHHH
Q 016882 144 APDFIIM 150 (381)
Q Consensus 144 ~~~~~~~ 150 (381)
.++.+..
T Consensus 77 ~~~~~~w 83 (85)
T PF06779_consen 77 THSFWLW 83 (85)
T ss_pred HhchHHH
Confidence 8887654
No 238
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.22 E-value=0.00025 Score=67.36 Aligned_cols=135 Identities=15% Similarity=0.161 Sum_probs=89.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH-----HhchHHHHHHHHHHHHHHHhh
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA-----LAPDFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~r~l~G~~~g~ 163 (381)
+|.+..+.++.......+..+++.+.+.+.++.++++.+.....+..++.++.. ..++++..+++.++.++|.+.
T Consensus 249 ~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 328 (413)
T PRK15403 249 GGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGL 328 (413)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHH
Confidence 589999999998888888888888888876554444443332222222222222 123444456788888999888
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
..+......- .-....+|++.++.+.....+..+++..++++... +-++.|...+++..+
T Consensus 329 ~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 329 IFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN--GGRLPFHLLAVVAGV 388 (413)
T ss_pred HhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHH
Confidence 8777765332 11233579999999988888889999998888665 345566555554443
No 239
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.14 E-value=0.00026 Score=67.47 Aligned_cols=119 Identities=17% Similarity=0.201 Sum_probs=107.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHH-HHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAF-NIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
++++..+.+.+.+.......+++.+.. .+...+|-|+.+.+|++.-.+.....+++++.|+++....+.++. +...+.
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~~~pa 350 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GIVFPA 350 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cchhHH
Confidence 799999999999998888888888777 778889999999999999999999999999999999988777764 557888
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
..++++.+.+++++|+..++.....++..+++|.+-+.+..
T Consensus 351 ~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 351 IRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 89999999999999999999999999999999999888764
No 240
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.06 E-value=2.9e-05 Score=70.13 Aligned_cols=137 Identities=17% Similarity=0.173 Sum_probs=114.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG--RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G--rk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 166 (381)
+|.++.|.|-+.+...++..+.+....+..||.. -+-.+..++.+..-..++.+.++....+.++-.+..+..+..-+
T Consensus 292 fg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt 371 (451)
T KOG2615|consen 292 FGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVT 371 (451)
T ss_pred cCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhH
Confidence 8999999999999999999999999888898887 67777777777777777778888888899999999998888888
Q ss_pred HHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHH
Q 016882 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (381)
Q Consensus 167 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~ 225 (381)
....++....|.++||..+|+.....+++-.+||.++|.+..+..+=+..+...+.+.+
T Consensus 372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~ 430 (451)
T KOG2615|consen 372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLL 430 (451)
T ss_pred HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHH
Confidence 88999999999999999999999999999999999998887554333444444443333
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.04 E-value=0.00014 Score=69.91 Aligned_cols=162 Identities=14% Similarity=-0.040 Sum_probs=103.6
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hchHHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRRELILA 130 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grk~~l~~~ 130 (381)
...+++.++.....+.....+|.+.++. .|.+..+.+.+.+.+.++.+++.++.|+++|| ..+|..+...
T Consensus 276 w~~~l~~~~~~lv~~~~~~~lpl~l~~~------~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~ 349 (495)
T KOG2533|consen 276 WPFSLCYFFLKLVNYGFSYWLPLYLKSN------GGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVF 349 (495)
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHcC------CCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4445555666666676777777776641 47899999999999999999999999999999 6777777766
Q ss_pred HHHHHHHH-HHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCccc-chhHHhHHHHHHHHHHHHHHHHHHHhh-
Q 016882 131 ALLYLVGA-LVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPM-RGQLISLKEFFIVLGMVGGYGIGSLLV- 207 (381)
Q Consensus 131 ~~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~- 207 (381)
+.+..+.. +......+.+.....-.....+.+...+......++....+. |-...+....+.+.+..+++.+-....
T Consensus 350 ~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~a 429 (495)
T KOG2533|consen 350 LCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDA 429 (495)
T ss_pred HHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccC
Confidence 66665544 444344334444444444445556566666777777665443 334444455566666555555544433
Q ss_pred cccchhHHHHHhhHHH
Q 016882 208 DLVAGWRYMYGASTPL 223 (381)
Q Consensus 208 ~~~~~w~~~f~i~~~~ 223 (381)
+.+ +|.+.|......
T Consensus 430 p~y-~~~~~f~~~~~~ 444 (495)
T KOG2533|consen 430 PRY-GWGAVFYMLVAA 444 (495)
T ss_pred cch-hhhhHHHHHHHH
Confidence 334 777777444333
No 242
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.03 E-value=0.00024 Score=69.68 Aligned_cols=133 Identities=21% Similarity=0.141 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHH---HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccc
Q 016882 105 YGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI---IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR 181 (381)
Q Consensus 105 ~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r 181 (381)
..........+.+.|++|||.....+.++..++.++.+...... ...+...+..++.+..+.....+.+|++|...|
T Consensus 361 ~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r 440 (521)
T KOG0255|consen 361 LVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVR 440 (521)
T ss_pred HHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 35555555668899999999999999999999999998876433 355566666666777777779999999999999
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH-HHHHHhhcccchh
Q 016882 182 GQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPR 239 (381)
Q Consensus 182 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~-~~~~~~~~~~~~~ 239 (381)
..+.+.......+|.+++|.+..........+.. .+.+....+ .++..+++||+..
T Consensus 441 ~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 441 NTAVGAISAAARLGSILAPLFPLLLRQMFPLLGL--ILFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchH--HHHHHHHHHHHHHHHhcCcccCC
Confidence 9999999999999999999998766543222322 223444444 4455578999854
No 243
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.01 E-value=2.4e-05 Score=54.79 Aligned_cols=65 Identities=20% Similarity=0.240 Sum_probs=53.4
Q ss_pred hhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 016882 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~ 133 (381)
+.+.-..+...+..+.+.++ .|++..++|.+.++..+...++++++|.++||+++++.++.+..+
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~-------~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQ-------LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 44444555666667777676 799999999999999999999999999999999998888776544
No 244
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.99 E-value=0.00034 Score=67.34 Aligned_cols=133 Identities=14% Similarity=0.092 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhch--H----H-HHHHHHHHHHHHHHHHHHh---------chHHHHHHHHHHHH
Q 016882 95 EIGLITSGSLYGALIGSILAFNIADILGR--R----R-ELILAALLYLVGALVTALA---------PDFIIMVVGRFVFG 158 (381)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr--k----~-~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~r~l~G 158 (381)
..+|+.+++.+..++.+|+.+++-.|.+| | + =+.+|+++.+++.+.+.++ .+.+++++..++.+
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 35777888888888889888888777633 2 1 1567888888777666431 25677889999999
Q ss_pred HHHhhHhHHHHHHHHhhCCcccchhHHhHHHHH-HHHHHHHHHHHHHHhhcc-----------cchhHHHHHhhHHHHHH
Q 016882 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFF-IVLGMVGGYGIGSLLVDL-----------VAGWRYMYGASTPLAVI 226 (381)
Q Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~-----------~~~w~~~f~i~~~~~~~ 226 (381)
+|+-+..|...++++++.|++.||+.+|.+... ..+|..++..+++..... ...+...|...++..++
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 468 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALA 468 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999764 467777777776665311 11355677777766654
Q ss_pred H
Q 016882 227 M 227 (381)
Q Consensus 227 ~ 227 (381)
+
T Consensus 469 ~ 469 (493)
T PRK15462 469 C 469 (493)
T ss_pred H
Confidence 4
No 245
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.96 E-value=0.00058 Score=64.44 Aligned_cols=107 Identities=15% Similarity=0.102 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcc
Q 016882 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP 179 (381)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~ 179 (381)
.++.+....+++++.+.+.|+.|+|..+.++............+. |-+-++.+..+.|+|.+..+...-.|+.|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 777888889999999999999999999999999988776666554 5667888999999999999999999999999999
Q ss_pred cchhHHhHHHHHHHHHHHHHHHHHHHhh
Q 016882 180 MRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (381)
Q Consensus 180 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 207 (381)
.+.+..++.......+.++|..+...+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 9999999999999999888877655544
No 246
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.94 E-value=0.019 Score=54.16 Aligned_cols=118 Identities=13% Similarity=0.055 Sum_probs=87.4
Q ss_pred ChhHHHHHHHHHHH-HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh----------------------c-h-
Q 016882 92 SSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTALA----------------------P-D- 146 (381)
Q Consensus 92 ~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~----------------------~-~- 146 (381)
.++...++-+..-+ +..+..++.+++.+++.|.+++......+....+++++. + +
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45667777777777 778889999999999999999887777766666666552 1 1
Q ss_pred --------HHHHHHHHHHHHHHHhhHhH-HHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 147 --------FIIMVVGRFVFGIGIGLAMH-AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 147 --------~~~~~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
.|...+...+.-+-...... ..+....|.+..++-.+..++++.+.+++..++..+..++..+
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 13333333333333333333 5677889999999999999999999999999999999998764
No 247
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.92 E-value=0.0047 Score=58.32 Aligned_cols=133 Identities=6% Similarity=-0.098 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH------h--c----hHHHHH---HHHHHHHHH
Q 016882 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL------A--P----DFIIMV---VGRFVFGIG 160 (381)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~------~--~----~~~~~~---~~r~l~G~~ 160 (381)
.+...-.-.+..++.++..|.+.||..|.+++-...+..-++..+.+. . . +-+... +.-.+.|..
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 334444455677788888999999999988876665554433322221 1 1 112222 111222211
Q ss_pred HhhH-hHHHHHHHHhhC------CcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH
Q 016882 161 IGLA-MHAAPMYIAETA------PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 161 ~g~~-~~~~~~~~~~~~------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
.-.. .....+.=-||. +++.+.+.++..--.=-+..+++|.+.|.+.... +.+...++.++..++.+.
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA-SPVIAAIFIAGWNLASVF 194 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHH
Confidence 1111 111111112332 3445556666666666678899999999999876 888887777777776443
No 248
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.84 E-value=6.7e-05 Score=69.36 Aligned_cols=118 Identities=24% Similarity=0.352 Sum_probs=90.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hchHHHHHH-HHHHHHHHHHHHHHhchH----------------
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRRELIL-AALLYLVGALVTALAPDF---------------- 147 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grk~~l~~-~~~~~~~~~~~~~~~~~~---------------- 147 (381)
+|++....+.+.-..-+...+.+++.|..+|| |||||.++. +.++..++.++..++.++
T Consensus 62 lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~ra 141 (498)
T KOG0637|consen 62 LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRA 141 (498)
T ss_pred cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHH
Confidence 68888888888878888888999999999995 898766655 555566666666665432
Q ss_pred -HHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchh-HHhHHHHHHHHHHHHHHHHHHHh
Q 016882 148 -IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQ-LISLKEFFIVLGMVGGYGIGSLL 206 (381)
Q Consensus 148 -~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~~~~~~~~l 206 (381)
..++++.-+.-++....+..+-+++.|+...+++-+ +++++....++|.++|..+++.+
T Consensus 142 i~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 142 IVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 234444555556677788889999999998777777 99999999999999998888744
No 249
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.78 E-value=0.00038 Score=64.59 Aligned_cols=115 Identities=18% Similarity=0.048 Sum_probs=85.4
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH-----HHHHHHHHhchHHHHHHHHHHHHHHHhhH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL-----VGALVTALAPDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 164 (381)
.-..++..+....+.+|-.++.--...+ |+ |+..+...+-.. +.....-+.++.|.+++.-+..|+..|..
T Consensus 277 ~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~ 352 (402)
T PF02487_consen 277 FSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGAS 352 (402)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHH
Confidence 3346788888888888877776543322 33 333333322222 22223344678899989999999999999
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
+......+.|-.|+++|..++|....+-++|.+++..++-++-+
T Consensus 353 YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 353 YVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998877643
No 250
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.76 E-value=0.00027 Score=66.10 Aligned_cols=109 Identities=14% Similarity=0.225 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhc---------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcc---cchhHHhHHHHHH
Q 016882 125 RELILAALLYLVGALVTALAP---------DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP---MRGQLISLKEFFI 192 (381)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~ 192 (381)
++++++.++..+|.++..++. +.+.++++..+.++|.|+.=+...++.+|-++++ +|.+...+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888854432 2367889999999999999999999999999865 4566777789999
Q ss_pred HHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhc
Q 016882 193 VLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (381)
Q Consensus 193 ~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 234 (381)
++|..++..+.+++.+.. +|.+.|.+.++..++.++..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999999887 99999999999988877666553
No 251
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.68 E-value=0.058 Score=51.98 Aligned_cols=117 Identities=11% Similarity=0.055 Sum_probs=81.7
Q ss_pred ChhHHHHHHHHHHH-HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh--c-----------------------
Q 016882 92 SSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--P----------------------- 145 (381)
Q Consensus 92 ~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~--~----------------------- 145 (381)
.++.+..+-....+ +..+...+..+++++++|.+++.+....+.....++++. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 34556666554444 556667789999999999998877666655555544442 0
Q ss_pred ------hHHHHHHHHHHHHHHHhhHhH-HHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 146 ------DFIIMVVGRFVFGIGIGLAMH-AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 146 ------~~~~~~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
+.|...+...+.-+-.....+ ..+.+.+|.++.++-.+..+++..+.++|..++..+...+.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333333344433333333 568899999999999999999999999999999999988887
No 252
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.66 E-value=0.0026 Score=60.65 Aligned_cols=149 Identities=17% Similarity=0.206 Sum_probs=111.0
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh----------chHHHHHHHHHHHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA----------PDFIIMVVGRFVFGI 159 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l~G~ 159 (381)
|+++...+.+..+..++..++..+...+..++.-|+++....++.++..+.-... ++.+-.+.--++..+
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 5899999999999999999999999988888888988888777766555432211 122222334456666
Q ss_pred HHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccc-------hhHHHHHhhHHHHHHHHHHHh
Q 016882 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-------GWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 160 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-------~w~~~f~i~~~~~~~~~~~~~ 232 (381)
..+..+-....+++|+.|+...|+..++.....++|..++..++..+.+..+ +-.+..++..++.++.+.+..
T Consensus 331 ~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~ 410 (433)
T PF03092_consen 331 IGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLF 410 (433)
T ss_pred HHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 6777777778899999999999999999999999999999999988875431 234556666666666666666
Q ss_pred hcccch
Q 016882 233 WLPASP 238 (381)
Q Consensus 233 ~~~~~~ 238 (381)
++|+..
T Consensus 411 lLp~~~ 416 (433)
T PF03092_consen 411 LLPPQK 416 (433)
T ss_pred HcCCCc
Confidence 677643
No 253
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.62 E-value=0.003 Score=58.70 Aligned_cols=133 Identities=14% Similarity=0.057 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhC
Q 016882 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (381)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 176 (381)
+.+.-+-.+-..+..+.+.++.+|+.-+.=+.+..++..++.++.+++++.+.-+++-.+.+++.|........+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 33444455566677777888888887555556667788888888899999999889999999999999888888754 55
Q ss_pred CcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhc
Q 016882 177 PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (381)
Q Consensus 177 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~ 234 (381)
++ ...+-+..+.+.++++|+..-..+...-.+-|..+++..++.++.++.++++
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 53 3467777888888888887766665521245777887777766655555543
No 254
>PRK03612 spermidine synthase; Provisional
Probab=97.57 E-value=0.011 Score=57.70 Aligned_cols=130 Identities=13% Similarity=0.030 Sum_probs=76.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHH-HHHHHH-HHH-HHHH---HhchH-HHHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL-AALLYL-VGA-LVTA---LAPDF-IIMVVGRFVFGIGI 161 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~-~~~~~~-~~~-~~~~---~~~~~-~~~~~~r~l~G~~~ 161 (381)
+|-+..+.+.+.+++..|.++|+.+++++.++.-++....- +..+.+ ++. ++.. ..... ..++..-++.++..
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788899999999999999999999988744333322111 111111 111 1111 11111 12233445677888
Q ss_pred hhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhc-ccchhHHHHHh
Q 016882 162 GLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD-LVAGWRYMYGA 219 (381)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~w~~~f~i 219 (381)
|+..|....+..+... ++-+...|-.+....+|+++|.++.+++.- ..+..+..+++
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~ 182 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALT 182 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 8888887766654332 234566777778888888888888777663 44333443333
No 255
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.53 E-value=0.0027 Score=60.36 Aligned_cols=89 Identities=16% Similarity=-0.003 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHH---hh-cc---cchhHHHHH
Q 016882 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL---LV-DL---VAGWRYMYG 218 (381)
Q Consensus 146 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~---l~-~~---~~~w~~~f~ 218 (381)
.++..++.-++.|++.+..+.....+.+ .+|++. +..+..+.+++++++..+--. .. +. ..+=...|.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~ 179 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFG 179 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHH
Confidence 4666667777889998888888777665 566443 444444455555444433221 11 21 112224455
Q ss_pred hhHHHHHHHHHHHhhcccchh
Q 016882 219 ASTPLAVIMGMGMWWLPASPR 239 (381)
Q Consensus 219 i~~~~~~~~~~~~~~~~~~~~ 239 (381)
+..++.+++++.+..+++.|-
T Consensus 180 ~a~~v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 180 TPCVVQLICIVCYLLLPKLPF 200 (437)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 555556666666666776653
No 256
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.52 E-value=0.0015 Score=58.58 Aligned_cols=153 Identities=21% Similarity=0.214 Sum_probs=113.8
Q ss_pred ccCChhHHH-HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 89 YDLSSVEIG-LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
.+++..+.. -+.-+..-.+.+.-++.=.+.|-.--|+++++-.+......++..+.++.+.+-+.-++.|...+ ...+
T Consensus 36 ~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIA 114 (433)
T KOG3810|consen 36 KNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIA 114 (433)
T ss_pred CCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHh
Confidence 566665543 12223344555666666678999999999998888888888888999999999999999998776 5566
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc-chhHHHHHhhHHHHHHHHHHHhhcccchhHHH
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV-AGWRYMYGASTPLAVIMGMGMWWLPASPRWLL 242 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~ 242 (381)
-++|+-+..+++++.++.+..-...-.|...|..++..++... .++...=.+......+..+..+++|..+|.+.
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~ 190 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLY 190 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhh
Confidence 7889999999999999999998888889999988888888643 13444444555555566677777887665433
No 257
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.48 E-value=0.0041 Score=58.64 Aligned_cols=137 Identities=16% Similarity=0.175 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhchH-------HHHHHHHHHHHHHHHHHHHh----------chHHHHHHHHHH
Q 016882 94 VEIGLITSGSLYGALIGSILAFNIADILGRR-------RELILAALLYLVGALVTALA----------PDFIIMVVGRFV 156 (381)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk-------~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l 156 (381)
-..+|..+...+..++.+++..++-.+.+++ .-+-+|+++.+.+.++.... .+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 3457788888888999998888888885543 22345566666555554443 247889999999
Q ss_pred HHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHh------hcccchhHHHHHhhHHHHHHHHHH
Q 016882 157 FGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL------VDLVAGWRYMYGASTPLAVIMGMG 230 (381)
Q Consensus 157 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l------~~~~~~w~~~f~i~~~~~~~~~~~ 230 (381)
+++|.=+..|...+++....|++-.+..++.+......|..++..+++.- .+.. .....|+..+...++..+.
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~~ 482 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGIL 482 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988888888888777732 1222 4556777777776664443
Q ss_pred H
Q 016882 231 M 231 (381)
Q Consensus 231 ~ 231 (381)
.
T Consensus 483 ~ 483 (498)
T COG3104 483 L 483 (498)
T ss_pred H
Confidence 3
No 258
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.41 E-value=0.0078 Score=54.76 Aligned_cols=143 Identities=15% Similarity=0.082 Sum_probs=91.5
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH-----hhchHHHHHH
Q 016882 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIAD-----ILGRRRELIL 129 (381)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~Grk~~l~~ 129 (381)
....+.+...|.-.+... .+|.+.+. -|.|-++.+....++. -..--+++.++.| |+||||..++
T Consensus 34 llLl~LYllQGiP~GL~~-~iP~lL~a-------k~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 34 LLLLFLYLLQGIPLGLIG-AIPLLLQA-------KGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred HHHHHHHHHcCCchhHhh-hhHHHhcC-------CCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceee
Confidence 334455678888888877 78887774 4777777665544431 1234567888888 9999887554
Q ss_pred -HHHHHHHHHHHHHHh-----------chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHH
Q 016882 130 -AALLYLVGALVTALA-----------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV 197 (381)
Q Consensus 130 -~~~~~~~~~~~~~~~-----------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 197 (381)
...+.+..+...+.. ++...+....++.-+..+.--.++-.+.-.+..+++.|.+......+...|.+
T Consensus 104 p~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~Gyf 183 (510)
T KOG3574|consen 104 PCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYF 183 (510)
T ss_pred ehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHH
Confidence 333333333333331 23333333445555666666666667777788889999998888888888888
Q ss_pred HHHHHHHHhh
Q 016882 198 GGYGIGSLLV 207 (381)
Q Consensus 198 ~~~~~~~~l~ 207 (381)
++..+.-.+.
T Consensus 184 L~~~ifLaL~ 193 (510)
T KOG3574|consen 184 LGNVVFLALE 193 (510)
T ss_pred hhcceeeEec
Confidence 8776654444
No 259
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.15 E-value=0.0072 Score=59.31 Aligned_cols=144 Identities=15% Similarity=0.127 Sum_probs=111.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHhch---------------------
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAPD--------------------- 146 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grk~~l~~~~~~~~~~~~~~~~~~~--------------------- 146 (381)
+|.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..++.++..++..
T Consensus 68 ~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~ 147 (571)
T KOG1237|consen 68 LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESP 147 (571)
T ss_pred hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCc
Confidence 677777777778888888888889999999975 8889998888888877655443211
Q ss_pred ----HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCC---c-c--cchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 016882 147 ----FIIMVVGRFVFGIGIGLAMHAAPMYIAETAP---T-P--MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (381)
Q Consensus 147 ----~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~---~-~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 216 (381)
...++.+.-+..+|.|+.-+...++-+|-++ + + .+...+.++....++|..++..+..+.-+.. +|.+.
T Consensus 148 s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~-~w~lg 226 (571)
T KOG1237|consen 148 SKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV-GWKLG 226 (571)
T ss_pred chHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc-cceee
Confidence 2355666677778899989999999999888 2 2 2236677788889999999988888887776 99999
Q ss_pred HHhhHHHHHHHHHHHhh
Q 016882 217 YGASTPLAVIMGMGMWW 233 (381)
Q Consensus 217 f~i~~~~~~~~~~~~~~ 233 (381)
|.+..+..++.+++++.
T Consensus 227 f~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 227 FGIPTVLNALAILIFLP 243 (571)
T ss_pred ccHHHHHHHHHHHHHHc
Confidence 99999888776665554
No 260
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.03 E-value=0.062 Score=51.04 Aligned_cols=107 Identities=20% Similarity=0.322 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---hhchHHHHHHHHHHHHHHHHHHHHh------------------chHHHHHHHHH
Q 016882 97 GLITSGSLYGALIGSILAFNIAD---ILGRRRELILAALLYLVGALVTALA------------------PDFIIMVVGRF 155 (381)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~d---~~Grk~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~r~ 155 (381)
+.......++..+++.+.+.+++ ++||++.+.++..+..++.++.... +++....++.+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 33334455556666666777764 5789999999988888877776552 24567778889
Q ss_pred HHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHH
Q 016882 156 VFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (381)
Q Consensus 156 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 204 (381)
+.|++-++.......++.... +++|..+.++.-.-..++..++.....
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999 578888888877777777766555444
No 261
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.02 E-value=0.017 Score=54.67 Aligned_cols=118 Identities=15% Similarity=0.143 Sum_probs=90.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh------c----hHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA------P----DFIIMVVGRFVFG 158 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~------~----~~~~~~~~r~l~G 158 (381)
-|+++...|.+-++..+....+.+.+.++.+|+|..+.=+++......+..++..+ + +...++.+-.+.-
T Consensus 288 ~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR 367 (432)
T PF06963_consen 288 QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSR 367 (432)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHH
Confidence 49999999999999999999999999999999998888777776665554444321 1 2334444445555
Q ss_pred HHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHh
Q 016882 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (381)
Q Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 206 (381)
+|.=+.--...-++.|..|+++||...|.-....++--++...++-.+
T Consensus 368 ~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 368 IGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 666666667788899999999999999998888887777776665544
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.85 E-value=0.064 Score=50.89 Aligned_cols=146 Identities=14% Similarity=0.055 Sum_probs=79.1
Q ss_pred HHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHH-----HhhchHHHHHH-
Q 016882 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIA-----DILGRRRELIL- 129 (381)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~-----d~~Grk~~l~~- 129 (381)
+..+.+++.|.-.+.....+|.+.++.. .+.+-+|.+.+.-+.. -+ -.-+++.++. .|+||||..++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~-----~~~sy~q~~~fSla~~-Pf-SlKlLWaPiVDs~y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMA-----KKVSYSQQAIFSLASY-PF-SLKLLWAPIVDSVYSKRIGRRKSWIIP 76 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhcccc-----CCCChhHheeeeeeec-hh-HHHHhhhhhhhhhcccccCCcchhhhH
Confidence 3445567888888777666777666311 2666667666543311 00 1233444444 58999987654
Q ss_pred -----HHHHHHHHHHH----------HHHh-------ch--HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHH
Q 016882 130 -----AALLYLVGALV----------TALA-------PD--FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLI 185 (381)
Q Consensus 130 -----~~~~~~~~~~~----------~~~~-------~~--~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~ 185 (381)
|..+..++.-+ -... ++ ...+....++.-+-.+.--.++-.+.-.+..+++++.+.
T Consensus 77 ~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~AS 156 (544)
T PF13000_consen 77 IQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYAS 156 (544)
T ss_pred HHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHH
Confidence 33222222222 0000 00 112222222222223333333344445567789999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhc
Q 016882 186 SLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 186 ~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
.....+.+.|..++..+.-.+.+
T Consensus 157 TcqtvG~~~Gyfls~tvFlalns 179 (544)
T PF13000_consen 157 TCQTVGQTAGYFLSFTVFLALNS 179 (544)
T ss_pred HHHHhHhhhhHHHHHHHHHhhCC
Confidence 99888888888888777666653
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.56 E-value=0.0063 Score=56.64 Aligned_cols=147 Identities=17% Similarity=0.065 Sum_probs=95.0
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHhc----hHHHHHHHHHHHHHHHhhH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALAP----DFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-k~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~r~l~G~~~g~~ 164 (381)
|.+....|++..+..++.++++.+.|.+.||... |.++++......++.+.....+ ..+.++..-.+.|++..+.
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC
Confidence 5566788999999999999999999999999875 5555555555555532222221 2344555566778877778
Q ss_pred hHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccc--hhHHHHH-hhHHHHHHHHHHHhhccc
Q 016882 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA--GWRYMYG-ASTPLAVIMGMGMWWLPA 236 (381)
Q Consensus 165 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~w~~~f~-i~~~~~~~~~~~~~~~~~ 236 (381)
.|+..-+-.|..-+..-+...|+.+....+-+.+-..+.+...+..+ +|..... ......++.+++..++++
T Consensus 377 ~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 377 LPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred CCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 88888888887766666777788776666655666666666665442 3444333 333333444444555544
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.41 E-value=0.12 Score=49.35 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchH--HHHH--HHHHHHHHHHHHHHH---------hchHHHHHHHHHHHHHHH
Q 016882 95 EIGLITSGSLYGALIGSILAFNIADILGRR--RELI--LAALLYLVGALVTAL---------APDFIIMVVGRFVFGIGI 161 (381)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk--~~l~--~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~~~ 161 (381)
..-....+++++-.+|..+..+.. .-++| ..++ +.=+++.-..++|.. .++-+..++..++.|+.+
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 334556678888888887554331 11222 2222 222233333334432 235566777899999999
Q ss_pred hhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHh
Q 016882 162 GLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (381)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 206 (381)
|-....+..+..+..++++|..+..+...+..+|..+|..++-.+
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888775543
No 265
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.41 E-value=0.0076 Score=52.24 Aligned_cols=87 Identities=24% Similarity=0.431 Sum_probs=65.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
++....+++.+.....-..++...+.|-+.||-|||+.-+.-.+-++++++ .-.++.+-.++++|.+.|+.....+...
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSaF 145 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSAF 145 (454)
T ss_pred cCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHHH
Confidence 678888888888887778888889999999999999975544444433322 2235688999999999999988877766
Q ss_pred HH-HHHhhC
Q 016882 169 PM-YIAETA 176 (381)
Q Consensus 169 ~~-~~~~~~ 176 (381)
-+ ++.|.-
T Consensus 146 EsWliaEHn 154 (454)
T KOG4332|consen 146 ESWLIAEHN 154 (454)
T ss_pred HHHHHHHhh
Confidence 44 455544
No 266
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.91 E-value=0.55 Score=43.74 Aligned_cols=93 Identities=11% Similarity=0.013 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHH
Q 016882 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (381)
Q Consensus 146 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~ 225 (381)
.++..++.-.+.+++.|..+.......++ +|++.-...++=.+.++.+.+++.-.......+...+=...|.+..++.+
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~l 194 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVILL 194 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHH
Confidence 35666667777888888777766665544 55454333333233333333333222222222332244456677777777
Q ss_pred HHHHHHhhcccchh
Q 016882 226 IMGMGMWWLPASPR 239 (381)
Q Consensus 226 ~~~~~~~~~~~~~~ 239 (381)
++++++..+|+.|-
T Consensus 195 lC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 195 LCFVLYLVLPKLPF 208 (406)
T ss_pred HHHHHHHHhhcchH
Confidence 78887777777653
No 267
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=95.77 E-value=0.015 Score=54.37 Aligned_cols=125 Identities=18% Similarity=0.175 Sum_probs=75.7
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchH-------HHHHH----HHHHHHHHHHHHHH-hchHHHHHHHHHHH
Q 016882 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRR-------RELIL----AALLYLVGALVTAL-APDFIIMVVGRFVF 157 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk-------~~l~~----~~~~~~~~~~~~~~-~~~~~~~~~~r~l~ 157 (381)
|.+..+..++..+...+..+|.+++|.++||+.|+ +.=.+ +..+.+...++... ..+...+.+..++.
T Consensus 279 ~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~ 358 (493)
T KOG1330|consen 279 GFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLV 358 (493)
T ss_pred CCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 44555667788888899999999999999995431 11111 11111111111111 12222233344445
Q ss_pred HHHH-hhHhHHHHHHHHhhCCcccchhHHhHHHH-HHHHHHHHHHHHHHHhhcccchhH
Q 016882 158 GIGI-GLAMHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSLLVDLVAGWR 214 (381)
Q Consensus 158 G~~~-g~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~~w~ 214 (381)
|... -..++...-+..|..|+++|..+.++-.. ...+|-.-+|.+.|.+.+...+|+
T Consensus 359 g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 359 GETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 5432 33455556667889999999999999654 455566667768888887655666
No 268
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.72 E-value=0.0027 Score=62.09 Aligned_cols=151 Identities=16% Similarity=0.246 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHH-HHHHHHHHHHHHHHhhc--hHHHHHHH
Q 016882 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLY-GALIGSILAFNIADILG--RRRELILA 130 (381)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~G--rk~~l~~~ 130 (381)
++...++.....+.........|.+.+.+ |++++++++++..+..+ +.++|.+++|++..|+. .|..+.+.
T Consensus 307 f~~~~la~~~~~~~~~G~~tF~pKylE~Q------F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~ 380 (539)
T PF03137_consen 307 FMCLILAGVFESFIVSGFATFLPKYLESQ------FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFC 380 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHH
Confidence 34555566666777777778888887764 89999999998877555 67899999999999874 45444444
Q ss_pred HHHHHHHHHHHH---H--hc-------------------------------------------------hHHHHHHHHHH
Q 016882 131 ALLYLVGALVTA---L--AP-------------------------------------------------DFIIMVVGRFV 156 (381)
Q Consensus 131 ~~~~~~~~~~~~---~--~~-------------------------------------------------~~~~~~~~r~l 156 (381)
.+...++.+... + ++ .+..+++..++
T Consensus 381 ~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~ 460 (539)
T PF03137_consen 381 IVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFI 460 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHH
Confidence 433333332210 0 00 11233344444
Q ss_pred HHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHH-HHHHHHHHHHHHHHHhhccc
Q 016882 157 FGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSLLVDLV 210 (381)
Q Consensus 157 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~ 210 (381)
.-+..+.........+-+..|+++|+.++|+... .-.+|.+-||.+.|.+.+..
T Consensus 461 ~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 461 LSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 4444444555555666788889999999999764 44557788888888888753
No 269
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.68 E-value=0.012 Score=55.99 Aligned_cols=77 Identities=21% Similarity=0.227 Sum_probs=60.8
Q ss_pred HhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHH-HHHHHHHHHH
Q 016882 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL-AALLYLVGAL 139 (381)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~-~~~~~~~~~~ 139 (381)
++..+...+.+-+.++.+.++ +|+++.+.|.+...--+..+++.|++|.++||+-+||.+++ +.+......+
T Consensus 20 ~~~~~~~~g~l~pll~vy~kQ-------LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 20 YLFFGARFGSLFPLLAVYFKQ-------LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred eeeeeecccccchHHHHHHHH-------cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 355556667777777777777 89999999999999999999999999999999987666555 4555556666
Q ss_pred HHHHh
Q 016882 140 VTALA 144 (381)
Q Consensus 140 ~~~~~ 144 (381)
+..+.
T Consensus 93 ll~fv 97 (618)
T KOG3762|consen 93 LLVFV 97 (618)
T ss_pred heeec
Confidence 65553
No 270
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.29 E-value=0.05 Score=54.61 Aligned_cols=65 Identities=15% Similarity=0.096 Sum_probs=47.3
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHH-HHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHH
Q 016882 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLY-GALIGSILAFNIADILG--RRRELILAALLYLVGALV 140 (381)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~G--rk~~l~~~~~~~~~~~~~ 140 (381)
.....+|.+.+++ +|+++.+.+++.+...+ +.+++.+++|++.||++ .|+.+.+++++..++.++
T Consensus 348 ~~~~~lP~yl~~~------~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 348 GYITFLPKYLENQ------YGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHH------cCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 3334556555432 79999999999988776 67899999999999998 466666666666555433
No 271
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.00 E-value=0.2 Score=46.84 Aligned_cols=98 Identities=19% Similarity=0.187 Sum_probs=75.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH--HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHH
Q 016882 93 SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA--ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPM 170 (381)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~ 170 (381)
...-|.+-++..+..+++++..|++..++.+..-+.++ .++.+...++++..+|.|..+++.++.+.......+....
T Consensus 284 ~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~ 363 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASF 363 (412)
T ss_pred cccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34457788888888999999999997777775444443 4444556667778899999999999999888888888888
Q ss_pred HHHhhCCcccchhHHhHHHH
Q 016882 171 YIAETAPTPMRGQLISLKEF 190 (381)
Q Consensus 171 ~~~~~~~~~~r~~~~~~~~~ 190 (381)
-++.....+.-+...|+...
T Consensus 364 qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 364 QIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHhccccceeeeeeeHHH
Confidence 78887777777777776544
No 272
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.87 E-value=0.046 Score=52.14 Aligned_cols=79 Identities=15% Similarity=0.152 Sum_probs=60.7
Q ss_pred HHHHHH-HHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHH
Q 016882 149 IMVVGR-FVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (381)
Q Consensus 149 ~~~~~r-~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~ 227 (381)
.+++++ ++.|++.-.......++-+|...+++++.+.++++....++.+++|.+........ |.|+...+.+...++.
T Consensus 389 ~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~-g~~~v~~~~~~~~l~~ 467 (488)
T KOG2325|consen 389 LYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS-GPRPVWIILLCLLLVV 467 (488)
T ss_pred hheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc-CccHHHHHHHHHHHHH
Confidence 344443 34566666666677888899999999999999999999999999999998888776 7777766666555543
Q ss_pred H
Q 016882 228 G 228 (381)
Q Consensus 228 ~ 228 (381)
.
T Consensus 468 ~ 468 (488)
T KOG2325|consen 468 A 468 (488)
T ss_pred H
Confidence 3
No 273
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=94.13 E-value=0.13 Score=49.15 Aligned_cols=95 Identities=14% Similarity=0.098 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHh
Q 016882 97 GLITSGSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (381)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~d~~Grk--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 174 (381)
|..-++..+..+++++..|++-.++.+- ..+.+..++.+...++++..+|+|..+++.++.+.......++...-++.
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~ 380 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIAS 380 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667777788899999997777553 33344455555566677788999999999999999999999999999999
Q ss_pred hCCcccchhHHhHHHHH
Q 016882 175 TAPTPMRGQLISLKEFF 191 (381)
Q Consensus 175 ~~~~~~r~~~~~~~~~~ 191 (381)
....+..|...|+..+.
T Consensus 381 ~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 381 SLSKELCALVFGINTFV 397 (511)
T ss_pred HhcccceEEEEecHHHH
Confidence 98888888888886653
No 274
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.02 E-value=0.019 Score=52.21 Aligned_cols=107 Identities=22% Similarity=0.200 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hchHHHHHH--HHHHHHHHHHHHH----------HhchHHHHHHHHHHHHHHHhhHh
Q 016882 99 ITSGSLYGALIGSILAFNIADI-LGRRRELIL--AALLYLVGALVTA----------LAPDFIIMVVGRFVFGIGIGLAM 165 (381)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~l~d~-~Grk~~l~~--~~~~~~~~~~~~~----------~~~~~~~~~~~r~l~G~~~g~~~ 165 (381)
....++++-.+|..+.++..=+ ..+|..... .=+++.-..++|- ..++-+..++..++.|+.+|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567888889998877764211 124443332 1222222222221 22344667778889999999999
Q ss_pred HHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHH
Q 016882 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205 (381)
Q Consensus 166 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 205 (381)
.....+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888888888776543
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.91 E-value=1.1 Score=41.91 Aligned_cols=113 Identities=18% Similarity=0.080 Sum_probs=75.9
Q ss_pred ChhHHHHHHHH-HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH-------HhchHHHHHHHHHHHHHHHhh
Q 016882 92 SSVEIGLITSG-SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA-------LAPDFIIMVVGRFVFGIGIGL 163 (381)
Q Consensus 92 ~~~~~~~~~~~-~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~r~l~G~~~g~ 163 (381)
+......+..+ +++...+|.+...++.++=.|+..+....=+..+-.+... ...+-+.+++...+.|+..|=
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 34445555666 8889999977777766554343333333323333333221 134557788889999999998
Q ss_pred HhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHH
Q 016882 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (381)
Q Consensus 164 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 204 (381)
..+....+..+-.|++++-.+-.+.......|...|..++.
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 88888888888888888888877778887888777776643
No 276
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.51 E-value=0.21 Score=46.88 Aligned_cols=130 Identities=16% Similarity=-0.027 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhC
Q 016882 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (381)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 176 (381)
.|=..++.+...+.+...-++++|+|-|+.+..+...+.++..+....++.+.....+...|+-.+.....-...++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 34456777888889999999999999777777777767777777777888777777787777544444333333333322
Q ss_pred C-----------------------cccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 177 P-----------------------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 177 ~-----------------------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
- ..-+|...|+.+....+..++.....+.+.+..++-+.+-...+++++.
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 1 1223555666777777788887777788887776667666666655554
No 277
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=90.33 E-value=1.1 Score=40.51 Aligned_cols=72 Identities=18% Similarity=0.335 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhC
Q 016882 104 LYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (381)
Q Consensus 104 ~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 176 (381)
....+.++++.+.+..++|.|.++.+++......- ..-+-+.+..++-.-.+.|++.+..++.--+|+++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 34445566666688999999999998877665421 1222345677788888999999888777666666554
No 278
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=90.28 E-value=11 Score=34.65 Aligned_cols=86 Identities=21% Similarity=0.259 Sum_probs=57.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH----HH-HH----hchHHHHHHHHHHHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL----VT-AL----APDFIIMVVGRFVFGI 159 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~----~~-~~----~~~~~~~~~~r~l~G~ 159 (381)
+|-.--|.+.+.+.+.....+|+...-++.|.--.-+.+..=.++..++.+ ++ .| .++.+.++++-++.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 355667889999999999999998888777653333222222222222211 11 22 2456788889999999
Q ss_pred HHhhHhHHHHHHHHh
Q 016882 160 GIGLAMHAAPMYIAE 174 (381)
Q Consensus 160 ~~g~~~~~~~~~~~~ 174 (381)
-.|...|....++..
T Consensus 118 LVG~EiPL~mrml~~ 132 (508)
T COG4262 118 LVGAEIPLLMRMLQR 132 (508)
T ss_pred HHhcchHHHHHHHHH
Confidence 999999998888766
No 279
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=90.10 E-value=4.7 Score=35.21 Aligned_cols=15 Identities=7% Similarity=-0.024 Sum_probs=8.8
Q ss_pred hHHHhcHHHHHHHcC
Q 016882 325 PSVLYYAASILQSAG 339 (381)
Q Consensus 325 ~~~~~~~~~~~~~~g 339 (381)
+..++....+.++.+
T Consensus 195 yGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 195 YGSNFVPVIYIQDHP 209 (254)
T ss_pred HhcccchHHHHHhCc
Confidence 455566666666653
No 280
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.93 E-value=0.62 Score=41.58 Aligned_cols=113 Identities=13% Similarity=-0.012 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHH
Q 016882 94 VEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYI 172 (381)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~ 172 (381)
.|.-|....+.+|-.++.-......-+ .-.-..+-.-.+++.+.-.+..+.+++|..++.-+.-|+-.|..++...--+
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i 367 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNI 367 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHH
Confidence 457788888777655443221111101 0001112223344445555667788999888888899998888888887778
Q ss_pred HhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHh
Q 016882 173 AETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (381)
Q Consensus 173 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 206 (381)
.+-.++++|-.+++....+-.+|..++..++-.+
T Consensus 368 ~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 368 HKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred hhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 8878889999999999999999998888877655
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.06 E-value=18 Score=32.00 Aligned_cols=133 Identities=14% Similarity=0.157 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHHHHHHHHHHHh----c---hHHHHHHHHHHHHHHHhhHhH
Q 016882 96 IGLITSGSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTALA----P---DFIIMVVGRFVFGIGIGLAMH 166 (381)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grk--~~l~~~~~~~~~~~~~~~~~----~---~~~~~~~~r~l~G~~~g~~~~ 166 (381)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..++.+....+.... + +...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 47788889999999999888887765443 33444444444333333222 1 233335666677788899999
Q ss_pred HHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHH
Q 016882 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 167 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
...-+=.++.|.+.|+..+.++-.-..+-..++-..-..-.... +-|..|-++.+...+..+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~-~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPT-TTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCcc-ccchhhhhhHHHHHHHHH
Confidence 99999999999999999988865433332222211100000112 567888888777666543
No 282
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=87.79 E-value=15 Score=32.13 Aligned_cols=92 Identities=13% Similarity=0.096 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHH----HHHHHHHHHHHHHHH-h----chHHHHHHHHHHHHHHHhhHh
Q 016882 96 IGLITSGSLYGALIGSILAFNIADI-LGRRRELI----LAALLYLVGALVTAL-A----PDFIIMVVGRFVFGIGIGLAM 165 (381)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~d~-~Grk~~l~----~~~~~~~~~~~~~~~-~----~~~~~~~~~r~l~G~~~g~~~ 165 (381)
.....-++..|..+|.+..|.+... +.||+.+. .+++++.+..+.... . .+...+++.-++.|++.=+.+
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 3455556667777777888887753 45665544 334444444444212 1 136678888888888876666
Q ss_pred HHHHHHHHhhC--CcccchhHHhH
Q 016882 166 HAAPMYIAETA--PTPMRGQLISL 187 (381)
Q Consensus 166 ~~~~~~~~~~~--~~~~r~~~~~~ 187 (381)
+.....--|.- .+++-|...|+
T Consensus 223 ~ViL~lPhEyK~~~pk~ig~~Fg~ 246 (267)
T PF07672_consen 223 GVILNLPHEYKGYNPKKIGIQFGL 246 (267)
T ss_pred HHHhcChhhhcCCCcceehhHHHH
Confidence 66554444432 33444444444
No 283
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=82.82 E-value=48 Score=32.11 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=54.4
Q ss_pred HHHHHHHhhHhHHHHHHHHhhCC-cccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 155 FVFGIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 155 ~l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
++.|+.........-..+.+.+| +++|+..+|-++...++.+++..++++.+.+.. ||.....+.-++.++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~-Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKY-GWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 44666667777777778888876 457788888888888888877777778888887 999888777666555
No 284
>PF12832 MFS_1_like: MFS_1 like family
Probab=82.71 E-value=8.4 Score=26.71 Aligned_cols=48 Identities=13% Similarity=0.113 Sum_probs=40.0
Q ss_pred HhhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHHHHH
Q 016882 320 QITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFFMSN 368 (381)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 368 (381)
.+.+...+.-|.|.++++.|+ +..+...+..+..+..+++.+++....
T Consensus 12 ~f~~~g~~~Pfl~~~~~~~Gl-~~~~iGil~~i~~~~~~~~~pl~g~la 59 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQLGL-SPSQIGILSAIRPLIRFLAPPLWGFLA 59 (77)
T ss_pred HHHHHHHHHhhhhHhhhhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556777888999999999 889999999999999999999877663
No 285
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=81.79 E-value=0.44 Score=43.23 Aligned_cols=79 Identities=11% Similarity=-0.064 Sum_probs=0.0
Q ss_pred HHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHH---Hhhccc-chhHHHHHhhHHHHHHHHHHH
Q 016882 156 VFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS---LLVDLV-AGWRYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 156 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~---~l~~~~-~~w~~~f~i~~~~~~~~~~~~ 231 (381)
+.|++.+..+.....+.+. +|++. +.....+.++++++...+.- ...+.. .+-...|.+..++.+++++.+
T Consensus 6 ~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s~l~ii~~~~~~~~~~~a~~yF~~a~~i~i~~~~~~ 80 (309)
T PF01733_consen 6 LIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVSLLRIITKASGSDVKTSAFIYFIIAVLIVILCIILY 80 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHHHHHHHHHHhhhccchhhhhHHHHHHHHHHHHHHHH
Confidence 4566666666666666554 55444 23333344444444333222 111111 122234444555555566666
Q ss_pred hhcccchh
Q 016882 232 WWLPASPR 239 (381)
Q Consensus 232 ~~~~~~~~ 239 (381)
+.++..|.
T Consensus 81 ~~l~~~~~ 88 (309)
T PF01733_consen 81 FILPRSPF 88 (309)
T ss_dssp --------
T ss_pred HHhccChH
Confidence 66666553
No 286
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=81.28 E-value=56 Score=31.84 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=51.8
Q ss_pred HHHHHHHhhHhHHHHHHHHhhCCc-ccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 155 FVFGIGIGLAMHAAPMYIAETAPT-PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 155 ~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
...|+.........-..+.+.+|. +.+...+|-++...++-+.+...+++.+.+.. ||+..-.+.-++.++
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~-GW~~~AlitPiv~li 361 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF-GWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhHHHHHH
Confidence 445666677777777778888864 45567777777777777777778888888887 999887776555544
No 287
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=80.78 E-value=33 Score=28.93 Aligned_cols=40 Identities=25% Similarity=0.150 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHH---HhhchHHHHHHHHHHHHHHHH
Q 016882 100 TSGSLYGALIGSILAFNIA---DILGRRRELILAALLYLVGAL 139 (381)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~---d~~Grk~~l~~~~~~~~~~~~ 139 (381)
.....+++.+|..+++.+. ++..+|+.....+.+..+..+
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~ 94 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLL 94 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 3445556666777777662 233344444444444443333
No 288
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=80.59 E-value=9.1 Score=34.50 Aligned_cols=137 Identities=14% Similarity=0.058 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhC
Q 016882 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (381)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 176 (381)
|.+.-+-.+-..+..+.+..+.||+.--.=+.+..++.+.+.++.+++++.++-+.+-.+..++.|........+.+. +
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-Y 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-C
Confidence 334444445555666666777777643333344556667777778888999998888889999888887776665443 3
Q ss_pred CcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc-cchhHHHHHhhHHHHHHHHHHHhhcccch
Q 016882 177 PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL-VAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (381)
Q Consensus 177 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 238 (381)
++. ..+-+..+.+.++++|..--..+.+. .-+-|...++...+.++.+..++++-++|
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 322 23334444444445554444444331 12567777777777766666666643333
No 289
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=79.17 E-value=7.4 Score=35.68 Aligned_cols=94 Identities=16% Similarity=0.164 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchHH--HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHh
Q 016882 97 GLITSGSLYGALIGSILAFNIADILGRRR--ELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (381)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~d~~Grk~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 174 (381)
|..-++..+..+++.+..|.+.-++.|.. .+.++.+..+...++++-++++|..+++..+.+.-.....++...-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 45556677788889999999987777653 3444555555556666777899999999999988888888888888888
Q ss_pred hCCcccchhHHhHHHH
Q 016882 175 TAPTPMRGQLISLKEF 190 (381)
Q Consensus 175 ~~~~~~r~~~~~~~~~ 190 (381)
....+.-|...|+...
T Consensus 354 nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTF 369 (433)
T ss_pred hhhhhhheeeeehHHH
Confidence 8888887888777654
No 290
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=78.74 E-value=12 Score=28.24 Aligned_cols=40 Identities=35% Similarity=0.627 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 016882 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (381)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~ 133 (381)
...+...+...++..++..+.+.+.|..|.+..+.+...+
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAIL 126 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHH
Confidence 3455556666677777777777777777766555444333
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.73 E-value=12 Score=27.64 Aligned_cols=33 Identities=9% Similarity=0.003 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHH
Q 016882 98 LITSGSLYGALIGSILAFNIADIL-GRRRELILA 130 (381)
Q Consensus 98 ~~~~~~~~~~~~~~~~~g~l~d~~-Grk~~l~~~ 130 (381)
+-.+.-+++..+.....||+.||| |.+++-++.
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv 79 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIV 79 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 334555667777777889999996 455544443
No 292
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=75.32 E-value=4.5 Score=35.35 Aligned_cols=56 Identities=13% Similarity=0.064 Sum_probs=37.2
Q ss_pred ccchhHHhHHHHHHHHHHHHHHHHHHHh---h-cccchhHHHHHhhHHHHHHHHHHHhhc
Q 016882 179 PMRGQLISLKEFFIVLGMVGGYGIGSLL---V-DLVAGWRYMYGASTPLAVIMGMGMWWL 234 (381)
Q Consensus 179 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l---~-~~~~~w~~~f~i~~~~~~~~~~~~~~~ 234 (381)
|+|+....+...++++|+.+....--.- . ....+|++.+.+.+++.++.++++.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5667777777778888887665443221 1 112379999999998887766666554
No 293
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=74.99 E-value=86 Score=30.56 Aligned_cols=61 Identities=15% Similarity=0.132 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
.+++...+..+..-..+....++-+.+.+|..=|+.|.+.+...++|+---..+.-++++.
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 3444556666777777888899999999999999999999998888865555555555444
No 294
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=74.57 E-value=35 Score=27.25 Aligned_cols=81 Identities=19% Similarity=0.308 Sum_probs=46.3
Q ss_pred HHHHhhchHHHHHHHHHHHH-HHHHHHHH---------hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHH
Q 016882 116 NIADILGRRRELILAALLYL-VGALVTAL---------APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLI 185 (381)
Q Consensus 116 ~l~d~~Grk~~l~~~~~~~~-~~~~~~~~---------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~ 185 (381)
.++||+-||-.+..|.-... ++.+.... .+++..+++...++|+|. ..+.+.+++-..++++.|..+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcc
Confidence 35777777766655432222 11111111 234455555555555543 234455566677778889999
Q ss_pred hHHHHHHHHHHHHH
Q 016882 186 SLKEFFIVLGMVGG 199 (381)
Q Consensus 186 ~~~~~~~~~g~~~~ 199 (381)
|+-.+-.+++-+.-
T Consensus 133 G~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 133 GWEEFKRNWGRMWE 146 (153)
T ss_pred cHHHHHHhHHHHHH
Confidence 99888877766543
No 295
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.74 E-value=2 Score=43.38 Aligned_cols=149 Identities=13% Similarity=0.131 Sum_probs=99.1
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCCccccCChhHHHHHHHHHHH-HHHHHHHHHHHHHHhh--chHHHHHHH
Q 016882 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLY-GALIGSILAFNIADIL--GRRRELILA 130 (381)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~--Grk~~l~~~ 130 (381)
+.+..++..+..+........+|.+.+.+ ||.+.+.+..+.+...+ +.++|.+++|++..|+ +.|.+..+.
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Q------fg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~ 467 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQ------FGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFV 467 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHH------cCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHH
Confidence 45556666677777777778888887764 89999999998855444 5578888999999876 445555554
Q ss_pred HHHHHHHHHH---HHHh-----------------------ch--------------------------------------
Q 016882 131 ALLYLVGALV---TALA-----------------------PD-------------------------------------- 146 (381)
Q Consensus 131 ~~~~~~~~~~---~~~~-----------------------~~-------------------------------------- 146 (381)
++...+..+. ..+. .+
T Consensus 468 ~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~ 547 (735)
T KOG3626|consen 468 IVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTES 547 (735)
T ss_pred HHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCccc
Confidence 4444443333 2110 00
Q ss_pred --------------------------------------HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHH
Q 016882 147 --------------------------------------FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLK 188 (381)
Q Consensus 147 --------------------------------------~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~ 188 (381)
+..+++..++.-+..+...+....++-+..++++|..++|+.
T Consensus 548 ~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~ 627 (735)
T KOG3626|consen 548 SGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQ 627 (735)
T ss_pred ccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHH
Confidence 002333333444444444455556667888999999999997
Q ss_pred HH-HHHHHHHHHHHHHHHhhc
Q 016882 189 EF-FIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 189 ~~-~~~~g~~~~~~~~~~l~~ 208 (381)
.+ ...+|.+-+|.+-|++++
T Consensus 628 ~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 628 WMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred HHHHHHHhcCCchHhhhhhHh
Confidence 55 555688899999999987
No 296
>PRK10263 DNA translocase FtsK; Provisional
Probab=69.31 E-value=68 Score=35.02 Aligned_cols=25 Identities=24% Similarity=-0.067 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHhhcccchhHHHHHh
Q 016882 194 LGMVGGYGIGSLLVDLVAGWRYMYGA 219 (381)
Q Consensus 194 ~g~~~~~~~~~~l~~~~~~w~~~f~i 219 (381)
.|+++|..++..+.... |.-...++
T Consensus 142 gGGIIG~lLs~lL~~Lf-G~vGa~LI 166 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLL-HSSGGTIA 166 (1355)
T ss_pred ccchHHHHHHHHHHHHH-hHHHHHHH
Confidence 35556655555555444 44333333
No 297
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=65.95 E-value=53 Score=24.49 Aligned_cols=26 Identities=8% Similarity=-0.040 Sum_probs=17.7
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhhCCc
Q 016882 153 GRFVFGIGIGLAMHAAPMYIAETAPT 178 (381)
Q Consensus 153 ~r~l~G~~~g~~~~~~~~~~~~~~~~ 178 (381)
.|.+.+.|..+..+...++..|...-
T Consensus 55 ~~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 55 VYAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHHhhHccccccHHHHHHHHHHH
Confidence 34455666666777888888887754
No 298
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=64.49 E-value=70 Score=29.79 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=14.2
Q ss_pred hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhC
Q 016882 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (381)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 176 (381)
++|+.....--.+..+..=...+..+.++.|.+
T Consensus 231 gNsF~v~~~~~v~~ai~~F~vl~ii~~i~~E~~ 263 (374)
T PF01528_consen 231 GNSFYVSVSDMVFGAINVFAVLSIIYLIVIEVV 263 (374)
T ss_pred hcceeeeHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455433332223333333334455555555544
No 299
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=64.40 E-value=61 Score=32.91 Aligned_cols=85 Identities=14% Similarity=0.055 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
.++.+.-.++.+++.........-+-.+-.|+..|+.+.+++....++|.++...+...-.... -|--.+.+.+++.++
T Consensus 565 ~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 643 (654)
T TIGR00926 565 ILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFSV-QAAEFFLFASLMLVV 643 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChH-HHHHHHHHHHHHHHH
Confidence 4555566677888888777777777788889999999999999999999998888776543322 343444455555444
Q ss_pred HHHHHh
Q 016882 227 MGMGMW 232 (381)
Q Consensus 227 ~~~~~~ 232 (381)
+++..+
T Consensus 644 ~~~f~~ 649 (654)
T TIGR00926 644 MAIFSI 649 (654)
T ss_pred HHHHHH
Confidence 444443
No 300
>PHA03237 envelope glycoprotein M; Provisional
Probab=62.44 E-value=1.2e+02 Score=28.76 Aligned_cols=14 Identities=29% Similarity=0.534 Sum_probs=8.6
Q ss_pred hHHHHHHHHHHHhC
Q 016882 255 LRESAISCLCRLRG 268 (381)
Q Consensus 255 ~~~~~~~~~~~~~~ 268 (381)
..+++++.++|.++
T Consensus 368 ~~~~~~~~~~r~r~ 381 (424)
T PHA03237 368 VQQKVKRYLNRVRG 381 (424)
T ss_pred HHHHHHHHHHHhhc
Confidence 34566667777664
No 301
>PHA03242 envelope glycoprotein M; Provisional
Probab=59.91 E-value=1.6e+02 Score=27.97 Aligned_cols=38 Identities=8% Similarity=0.013 Sum_probs=17.4
Q ss_pred HhHHHHHHHHhhCC----cccchhHHhHHHHHHHHHHHHHHH
Q 016882 164 AMHAAPMYIAETAP----TPMRGQLISLKEFFIVLGMVGGYG 201 (381)
Q Consensus 164 ~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~ 201 (381)
..+..+.++.|.+= +..-|...|.+.....+|...--.
T Consensus 265 vL~ii~liv~E~vL~~Yv~vl~G~~lG~lia~~~l~~p~~rY 306 (428)
T PHA03242 265 LLVVLLLVVVEGVLSHYVRVLPGPHLGALVAAGIVGVAAHRY 306 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHH
Confidence 34444445555432 234455555555444444443333
No 302
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=59.29 E-value=1.9e+02 Score=30.09 Aligned_cols=37 Identities=8% Similarity=-0.152 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHH
Q 016882 188 KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (381)
Q Consensus 188 ~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~ 225 (381)
...+..++.++...++.++.... +|...+++.++++.
T Consensus 106 l~~~M~lT~livAL~a~~Li~GL-~~~~ALLLGAILAP 142 (810)
T TIGR00844 106 LVPVMTSGWLVIALFVWILVPGL-NFPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcC
Confidence 34444555556655555554444 78877777777654
No 303
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=56.92 E-value=1.6e+02 Score=27.66 Aligned_cols=123 Identities=13% Similarity=-0.006 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH------h------chHHHHHHHHHHHHHHHhhH--hHHH
Q 016882 103 SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL------A------PDFIIMVVGRFVFGIGIGLA--MHAA 168 (381)
Q Consensus 103 ~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~------~------~~~~~~~~~r~l~G~~~g~~--~~~~ 168 (381)
-.....+..++.|...|+..|+|++...+.+.-++.++++. . .+.+.+..+..+.-...+.. ....
T Consensus 72 esgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A 151 (503)
T KOG2601|consen 72 ESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLA 151 (503)
T ss_pred HHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhh
Confidence 33445566677778889999999887766655444333322 1 24555555554433211111 1111
Q ss_pred HHH--HHhhC----CcccchhH---HhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHH
Q 016882 169 PMY--IAETA----PTPMRGQL---ISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (381)
Q Consensus 169 ~~~--~~~~~----~~~~r~~~---~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~ 226 (381)
..+ --||. ..+.+..+ .+..-..-.....+.|.+.+.+.+.. +-|..-.+.++...+
T Consensus 152 ~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfv-sl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 152 GTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFV-SLRASAGTFAAWALV 217 (503)
T ss_pred heEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceee-chhhhhhhhHHHHHH
Confidence 111 11221 12223333 34444445556788999999988876 777766555555544
No 304
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=53.36 E-value=1.1e+02 Score=24.42 Aligned_cols=25 Identities=28% Similarity=0.397 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchHH
Q 016882 101 SGSLYGALIGSILAFNIADILGRRR 125 (381)
Q Consensus 101 ~~~~~~~~~~~~~~g~l~d~~Grk~ 125 (381)
.-|.+++.+.+.+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 3577888899999999999988764
No 305
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=53.06 E-value=80 Score=22.40 Aligned_cols=70 Identities=21% Similarity=0.078 Sum_probs=42.0
Q ss_pred HHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHH
Q 016882 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 158 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~ 231 (381)
|+|-=...|..+.++.|..= -....+.......+|..+|.+....+.... ..+..+....+.+.+.....
T Consensus 5 GigRFayTplLP~M~~~~~l---s~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGL---SLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHH
Confidence 44444456677777777432 234456666777778888888877776654 55555555555555544433
No 306
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=52.82 E-value=1.9e+02 Score=26.75 Aligned_cols=104 Identities=17% Similarity=0.157 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHHHHHh--chH-------------H---HHHH--HH-HHHHHHH
Q 016882 105 YGALIGSILAFNIADILG--RRRELILAALLYLVGALVTALA--PDF-------------I---IMVV--GR-FVFGIGI 161 (381)
Q Consensus 105 ~~~~~~~~~~g~l~d~~G--rk~~l~~~~~~~~~~~~~~~~~--~~~-------------~---~~~~--~r-~l~G~~~ 161 (381)
+..++.++++..+.|+.| ++..+..+..+..++.++.... .|+ . ..+. -| .+.|+..
T Consensus 174 ~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~q 253 (354)
T PF05631_consen 174 VVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQ 253 (354)
T ss_pred HHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHH
Confidence 344555556666667664 5767777777777666655431 111 0 0111 11 3578888
Q ss_pred hhHhHHHHHHHHhhCCcc---cchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 162 GLAMHAAPMYIAETAPTP---MRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 162 g~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
.......+.++-.|.|.- .+..-.|+.........++|..+...+..
T Consensus 254 slFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s 303 (354)
T PF05631_consen 254 SLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLS 303 (354)
T ss_pred HHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 888999999999999843 34566888888888888888888866554
No 307
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=50.31 E-value=1.6e+02 Score=26.15 Aligned_cols=34 Identities=15% Similarity=0.237 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHh
Q 016882 129 LAALLYLVGALVTAL-APDFIIMVVGRFVFGIGIG 162 (381)
Q Consensus 129 ~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~g 162 (381)
.+.+.+.+..++..+ .++.|.+.+.-++.+++.+
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 333444333333333 3444555555555555444
No 308
>PTZ00101 rhomboid-1 protease; Provisional
Probab=49.16 E-value=2e+02 Score=25.73 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHH-HHhhchHHHHHHHHHHHHHHHHHHHH
Q 016882 105 YGALIGSILAFNI-ADILGRRRELILAALLYLVGALVTAL 143 (381)
Q Consensus 105 ~~~~~~~~~~g~l-~d~~Grk~~l~~~~~~~~~~~~~~~~ 143 (381)
+..++.....|.. -..+|+++.+++-.+....++++...
T Consensus 119 l~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~s~~ 158 (278)
T PTZ00101 119 FFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNILSSS 158 (278)
T ss_pred HHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555554 45689999886666665556555443
No 309
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=47.95 E-value=2.7e+02 Score=27.10 Aligned_cols=80 Identities=20% Similarity=0.156 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhhCCc-ccchhHHhHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHhhHHHHHHH
Q 016882 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPT-PMRGQLISLKEFFIVLG-MVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (381)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~ 227 (381)
+.+.-...|++........-+-+.+.+|. ..+...+|-++...++- .++...+++-+.... ||-..-++.-++.++.
T Consensus 287 ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~-GW~~~AlitPiv~lit 365 (509)
T COG3202 287 IALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRV-GWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 33444556777777777777888888874 44666677777666666 667777788888876 9998888777777665
Q ss_pred HHH
Q 016882 228 GMG 230 (381)
Q Consensus 228 ~~~ 230 (381)
.++
T Consensus 366 g~l 368 (509)
T COG3202 366 GVL 368 (509)
T ss_pred HHH
Confidence 433
No 310
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=47.24 E-value=3.4e+02 Score=27.96 Aligned_cols=50 Identities=18% Similarity=0.320 Sum_probs=31.1
Q ss_pred HHHHHh----hchHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHhhH
Q 016882 115 FNIADI----LGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 115 g~l~d~----~Grk~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~ 164 (381)
+-++|. -||.+-++++.+++.++.+...+. +..|.+..+-++.+++.++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 445553 467777778888887777766654 44556656665665555533
No 311
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=46.19 E-value=3.3e+02 Score=28.03 Aligned_cols=44 Identities=16% Similarity=0.204 Sum_probs=29.2
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHhhH
Q 016882 121 LGRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLA 164 (381)
Q Consensus 121 ~Grk~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~g~~ 164 (381)
-||.+-++++.+++.++.+...+.. ..|.+..+-++.+++.++.
T Consensus 54 ~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 54 TGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 4677888888888888777776654 4555555655666655543
No 312
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=45.68 E-value=1.2e+02 Score=22.29 Aligned_cols=27 Identities=7% Similarity=-0.176 Sum_probs=13.6
Q ss_pred HHHHHHHHHH-HhhchHHHHHHHHHHHH
Q 016882 109 IGSILAFNIA-DILGRRRELILAALLYL 135 (381)
Q Consensus 109 ~~~~~~g~l~-d~~Grk~~l~~~~~~~~ 135 (381)
+.+.+.|... .++|-++.+.+.+++.+
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 3444444444 46776665554444433
No 313
>COG3619 Predicted membrane protein [Function unknown]
Probab=45.23 E-value=2e+02 Score=24.74 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 016882 93 SVEIGLITSGSLYGALIGSILAFNIADILGR 123 (381)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr 123 (381)
............+..++|......+..|..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445556666777777776555555555554
No 314
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=45.23 E-value=47 Score=29.05 Aligned_cols=45 Identities=9% Similarity=-0.000 Sum_probs=34.6
Q ss_pred hhchhHHHhcHHHHHHHcCCCCCchhHHHHHHHHHHHHHHhHHHHH
Q 016882 321 ITGQPSVLYYAASILQSAGFSAASDATRVSILLGLFKVGSCTLFFM 366 (381)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~ 366 (381)
....+.+..|.|.+-++.|+ ++++...++....++..+|.+.|++
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~-sq~~l~~l~~~~~~G~~~G~~~G~l 59 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGY-SQSQLNTLSTAGDIGSYFGILAGLL 59 (250)
T ss_pred cCcccchhhhhHHHHHHhCC-CHHHHHHHHHHHHHHhhccHHHHHH
Confidence 34467889999999999999 8888888887777777766555553
No 315
>PRK11715 inner membrane protein; Provisional
Probab=45.18 E-value=2.9e+02 Score=26.53 Aligned_cols=19 Identities=26% Similarity=0.329 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 016882 127 LILAALLYLVGALVTALAP 145 (381)
Q Consensus 127 l~~~~~~~~~~~~~~~~~~ 145 (381)
+++|+.+...-.++.+++.
T Consensus 335 lLVGlAl~lFYLLLLSlSE 353 (436)
T PRK11715 335 LLVGLALVLFYLLLLSLSE 353 (436)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3344444444444444443
No 316
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=43.49 E-value=1.2e+02 Score=25.22 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhch
Q 016882 101 SGSLYGALIGSILAFNIADILGR 123 (381)
Q Consensus 101 ~~~~~~~~~~~~~~g~l~d~~Gr 123 (381)
.-|.+++.+.+.+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 34678889999999999999875
No 317
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=43.01 E-value=2.5e+02 Score=25.15 Aligned_cols=59 Identities=19% Similarity=0.030 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcc
Q 016882 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
.-..|.+.|+-.-.. ...++++.-+||++++-...-=.....+++.++.++++-.+.-.
T Consensus 22 ~~~lr~~~g~~~vlf-~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~~~ 80 (287)
T PF07760_consen 22 IPPLRVILGFPFVLF-LPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLNYT 80 (287)
T ss_pred hhHHHHHHHHHHHHH-hccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456788888776544 45688888999966554443334445555556666666555433
No 318
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=42.67 E-value=3.1e+02 Score=26.23 Aligned_cols=54 Identities=15% Similarity=0.254 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhH
Q 016882 127 LILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQL 184 (381)
Q Consensus 127 l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~ 184 (381)
+++|+.+...-.++.+++.... +..+..+... ........|+.-....++|+..
T Consensus 329 ~LVGlAl~lFYlLLLSlSEhi~-F~~AYliAa~---a~i~Li~~Y~~~vl~~~k~~~~ 382 (430)
T PF06123_consen 329 LLVGLALVLFYLLLLSLSEHIG-FNLAYLIAAL---ACIGLISLYLSSVLKSWKRGLI 382 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHH---HHHHHHHHHHHHHHhcchHHHH
Confidence 4555555555555555554322 2222222222 2222334455555555555543
No 319
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=42.57 E-value=5.6e+02 Score=29.15 Aligned_cols=21 Identities=14% Similarity=0.101 Sum_probs=12.3
Q ss_pred hhHHHHHhhHHHHHHHHHHHh
Q 016882 212 GWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~~~~~~~ 232 (381)
+|+.++++.+++.++.++..+
T Consensus 196 sw~Lalv~l~~~pl~~~~~~~ 216 (1466)
T PTZ00265 196 NARLTLCITCVFPLIYICGVI 216 (1466)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 888877666555444444333
No 320
>PHA03231 glycoprotein BALF4; Provisional
Probab=41.86 E-value=1e+02 Score=31.94 Aligned_cols=13 Identities=23% Similarity=0.107 Sum_probs=8.0
Q ss_pred hHHHHHHHHHHHh
Q 016882 255 LRESAISCLCRLR 267 (381)
Q Consensus 255 ~~~~~~~~~~~~~ 267 (381)
..+|++++++.++
T Consensus 769 ~~eea~~mL~~m~ 781 (829)
T PHA03231 769 KLEEAREMLLAMH 781 (829)
T ss_pred CHHHHHHHHHHHH
Confidence 5566666666554
No 321
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=40.50 E-value=2.2e+02 Score=23.93 Aligned_cols=23 Identities=13% Similarity=-0.162 Sum_probs=11.6
Q ss_pred hhHHHHHhhHHHHHHHHHHHhhc
Q 016882 212 GWRYMYGASTPLAVIMGMGMWWL 234 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~~~~~~~~~ 234 (381)
+.+..-++..+++++++.+.+++
T Consensus 175 np~l~~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 175 NPVLPPWVYIIIGVIAFALRFYL 197 (206)
T ss_pred CcCCCHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555555443
No 322
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=39.46 E-value=2.7e+02 Score=24.51 Aligned_cols=67 Identities=10% Similarity=-0.061 Sum_probs=39.4
Q ss_pred HHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHH
Q 016882 154 RFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (381)
Q Consensus 154 r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~ 223 (381)
-.+.=...|.-.....+.+.+.+|+++|-++.-+--.+..+--.+.-..+.++.+ -|.+.+.+.+..
T Consensus 23 l~~lE~vL~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~---l~~~l~~~fg~~ 89 (254)
T COG0861 23 LILLEIVLGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLT---LTQPLLYIFGLY 89 (254)
T ss_pred HHHHHHHHHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHH
Confidence 3344444566778888889999999888877655333333333444444555554 345555554433
No 323
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=38.75 E-value=66 Score=25.67 Aligned_cols=23 Identities=17% Similarity=0.400 Sum_probs=13.3
Q ss_pred cccchhhccccchHHHHHHHHHH
Q 016882 294 EVSLREVFHGKCLKALIIGAGLV 316 (381)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~ 316 (381)
....-+...++..+++.+.+.+=
T Consensus 50 ~~~IP~~Vs~RM~rRm~~~~GiP 72 (153)
T PF11947_consen 50 DSAIPEVVSNRMLRRMAVFVGIP 72 (153)
T ss_pred ccccCHHHHHHHHHHHHHHhchH
Confidence 34455666667667766655443
No 324
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=38.47 E-value=2.2e+02 Score=23.19 Aligned_cols=61 Identities=5% Similarity=-0.224 Sum_probs=40.4
Q ss_pred hCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhcccc-----hhHHHHHhhHHHHHHHHHHHhhcc
Q 016882 175 TAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-----GWRYMYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 175 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-----~w~~~f~i~~~~~~~~~~~~~~~~ 235 (381)
.+|..++.+..+.+..+.-++...--.+-+.+..... .+...++++++++.+..+..-.++
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~ 79 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVS 79 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcccc
Confidence 4555566667777666666666666666666654332 477888999999888766655443
No 325
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=37.79 E-value=41 Score=28.80 Aligned_cols=97 Identities=24% Similarity=0.288 Sum_probs=61.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHH
Q 016882 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (381)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (381)
||+++.+.-=..+.|.+|..+|.++++.++.-+ ..+ +.-.-.....-.|+|.|...+.+
T Consensus 134 YGldSpEgrGVl~~Yi~GTvfGtiffsllas~~-------------------a~~--~~fhP~ALAMasGvGSgSMMaAa 192 (241)
T PF11299_consen 134 YGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLL-------------------ASL--GIFHPYALAMASGVGSGSMMAAA 192 (241)
T ss_pred cCCCCccccceEEEeeehhhHHHHHHHHHHHHH-------------------Hhc--cCCCHHHHHHHcCCcHHHHHHHH
Confidence 677666666667777777777777766555321 111 10011222334578888888888
Q ss_pred HHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhh
Q 016882 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (381)
Q Consensus 169 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 207 (381)
..-+.+.+| +......++-...+.+..+.|..+.-++.
T Consensus 193 ~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifia 230 (241)
T PF11299_consen 193 SGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFIA 230 (241)
T ss_pred HHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887 66677888877777777777766655543
No 326
>COG4769 Predicted membrane protein [Function unknown]
Probab=37.67 E-value=1.1e+02 Score=24.81 Aligned_cols=51 Identities=16% Similarity=0.158 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Q 016882 103 SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGI 159 (381)
Q Consensus 103 ~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 159 (381)
+.....+.+...-++..++|+|..=++|... +-++.+|..++.+.+++.+-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 3444455556666778888988775444433 33567899999999888763
No 327
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=37.05 E-value=1.3e+02 Score=30.13 Aligned_cols=83 Identities=13% Similarity=0.139 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHh-----------------chHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHH
Q 016882 127 LILAALLYLVGALVTALA-----------------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKE 189 (381)
Q Consensus 127 l~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~ 189 (381)
+-+|+++..+.....+.. -+.++++--.++.|++.........-+.-+-+|+..|+.+.+++.
T Consensus 421 ig~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l 500 (571)
T KOG1237|consen 421 IGIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWL 500 (571)
T ss_pred eeccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHH
Confidence 345666666665555442 135666677789999999999998989899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 016882 190 FFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 190 ~~~~~g~~~~~~~~~~l~~~ 209 (381)
...++|..+...+.......
T Consensus 501 ~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 501 LTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999988766543
No 328
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=36.48 E-value=1.4e+02 Score=22.15 Aligned_cols=27 Identities=15% Similarity=0.328 Sum_probs=19.0
Q ss_pred hhHHHHHhhHHHHHH-HHHHHhhcccch
Q 016882 212 GWRYMYGASTPLAVI-MGMGMWWLPASP 238 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~-~~~~~~~~~~~~ 238 (381)
+|+.+|++...++++ ..+.+.+.||+.
T Consensus 58 ~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 58 GWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 899998887777665 445555677764
No 329
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=36.47 E-value=1.2e+02 Score=19.62 Aligned_cols=44 Identities=20% Similarity=0.135 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHHhhcccc
Q 016882 193 VLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (381)
Q Consensus 193 ~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 237 (381)
-+|.+++-..+......+ ++....++..+.+++..++...+|++
T Consensus 12 il~~vvgyI~ssL~~~~~-n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTY-NFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHhCCCC-ChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 345555544443333344 77788777777777766666566654
No 330
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=35.96 E-value=77 Score=17.26 Aligned_cols=13 Identities=15% Similarity=0.243 Sum_probs=4.9
Q ss_pred HHHHHhhcccchh
Q 016882 227 MGMGMWWLPASPR 239 (381)
Q Consensus 227 ~~~~~~~~~~~~~ 239 (381)
.+....+++|+|+
T Consensus 16 ilffAI~FRePPr 28 (29)
T PF01405_consen 16 ILFFAIFFREPPR 28 (29)
T ss_dssp HHHHHHHSS----
T ss_pred HHHhhhhccCCCC
Confidence 3444456778775
No 331
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=34.27 E-value=1.4e+02 Score=19.77 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=21.8
Q ss_pred hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccch
Q 016882 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRG 182 (381)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~ 182 (381)
+-++..+.......++..+.... ...+++|..+++++|
T Consensus 25 ~i~it~F~~n~~~g~i~i~I~l~-l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 25 FINITAFLINQIAGLISIGITLF-LAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCC
Confidence 33555555555555555554443 356778888765543
No 332
>PRK10692 hypothetical protein; Provisional
Probab=33.91 E-value=1.6e+02 Score=20.91 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=10.0
Q ss_pred hHHHHHHHHHHHHHHHH
Q 016882 123 RRRELILAALLYLVGAL 139 (381)
Q Consensus 123 rk~~l~~~~~~~~~~~~ 139 (381)
||...++|.++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 56666666666655543
No 333
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=33.40 E-value=2.8e+02 Score=22.98 Aligned_cols=21 Identities=19% Similarity=0.124 Sum_probs=11.0
Q ss_pred HHHHHHhhHhHHHHHHHHhhC
Q 016882 156 VFGIGIGLAMHAAPMYIAETA 176 (381)
Q Consensus 156 l~G~~~g~~~~~~~~~~~~~~ 176 (381)
+.|++.|...-+.+-|+.+..
T Consensus 132 l~a~vgGfamy~my~y~yr~~ 152 (226)
T COG4858 132 LTAVVGGFAMYIMYYYAYRMR 152 (226)
T ss_pred HHHHhhhHHHHHHHHHHHHhh
Confidence 444445555555555555544
No 334
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=33.40 E-value=4e+02 Score=24.74 Aligned_cols=16 Identities=13% Similarity=-0.101 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHhh
Q 016882 106 GALIGSILAFNIADIL 121 (381)
Q Consensus 106 ~~~~~~~~~g~l~d~~ 121 (381)
.-.+.....|++..|+
T Consensus 7 ~~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 7 LPIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 3344445555665554
No 335
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=32.92 E-value=2.2e+02 Score=26.99 Aligned_cols=58 Identities=12% Similarity=0.057 Sum_probs=47.3
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHHHHhhccc
Q 016882 153 GRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (381)
Q Consensus 153 ~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 210 (381)
...+.+...-..+....++.+++.|+..-|+.|.+.+.-.++|+---..+..++.+..
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 4556666666667778889999999999999999999999999877777777777765
No 336
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=32.59 E-value=3.9e+02 Score=24.36 Aligned_cols=57 Identities=19% Similarity=0.122 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhH----HHHHHHHHHHHHHHHHHHhhcc
Q 016882 148 IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISL----KEFFIVLGMVGGYGIGSLLVDL 209 (381)
Q Consensus 148 ~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~~g~~~~~~~~~~l~~~ 209 (381)
..+.++-++.|+..+..-.... ...++.-....++ .....+.|+..||.++..+...
T Consensus 209 ~aF~isa~~AGiAGaL~a~~~~-----~v~p~~f~~~~S~~~l~~vvlGG~Gt~~G~v~Ga~l~~~ 269 (314)
T COG4177 209 LAFVISAAIAGIAGALYALYLG-----FVSPESFSFTLSIEVLAMVVLGGAGTLFGALLGAVLVVL 269 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-----eeChhhccHHHHHHHHHHHHHcCccccHHHHHHHHHHHH
Confidence 4455566666665443322222 2222322333333 3445556778888888777643
No 337
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=32.33 E-value=2.3e+02 Score=21.58 Aligned_cols=24 Identities=13% Similarity=0.148 Sum_probs=16.5
Q ss_pred HHHHHHHHhhHhHHHHHHHHhhCC
Q 016882 154 RFVFGIGIGLAMHAAPMYIAETAP 177 (381)
Q Consensus 154 r~l~G~~~g~~~~~~~~~~~~~~~ 177 (381)
|.+.+.|.-+.+....++..|...
T Consensus 60 ~~~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 60 KLLLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHHHhchHhhHHHHHHHHHH
Confidence 555566666677777888877664
No 338
>COG1288 Predicted membrane protein [Function unknown]
Probab=32.05 E-value=1.7e+02 Score=27.98 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHH-hhcccchhHHHHHhhHHHHHHHHH
Q 016882 193 VLGMVGGYGIGSL-LVDLVAGWRYMYGASTPLAVIMGM 229 (381)
Q Consensus 193 ~~g~~~~~~~~~~-l~~~~~~w~~~f~i~~~~~~~~~~ 229 (381)
.++..++.-+++. +.+.. +||...|+......+..+
T Consensus 198 PF~~~IAq~iAGip~~sG~-~~Riv~~v~~~~~~i~y~ 234 (481)
T COG1288 198 PFATVIAQNIAGIPFLSGM-GLRIVVWVVFTLISIIYV 234 (481)
T ss_pred chHHHHHhhhcCCcccccc-hHHHHHHHHHHHHHHHHH
Confidence 3344444444443 22344 899988887766555433
No 339
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=31.58 E-value=1.9e+02 Score=20.52 Aligned_cols=41 Identities=17% Similarity=0.082 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHhhch-------HHHHHHHHHHHHHHHHHHHHhch
Q 016882 106 GALIGSILAFNIADILGR-------RRELILAALLYLVGALVTALAPD 146 (381)
Q Consensus 106 ~~~~~~~~~g~l~d~~Gr-------k~~l~~~~~~~~~~~~~~~~~~~ 146 (381)
+.....+.++++.+|..+ ++.+.++.++...+.++++..++
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 334555666677766554 67778888887778877777554
No 340
>PF15050 SCIMP: SCIMP protein
Probab=30.75 E-value=88 Score=23.58 Aligned_cols=36 Identities=25% Similarity=0.240 Sum_probs=17.6
Q ss_pred hhHHHHHhhHHHHHHH--HHHHhhcccchhHHHHhhcc
Q 016882 212 GWRYMYGASTPLAVIM--GMGMWWLPASPRWLLLCAMK 247 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 247 (381)
-||--||+..+++++. +.+-+.+.=-.+|+.++|++
T Consensus 3 WWr~nFWiiLAVaII~vS~~lglIlyCvcR~~lRqGkk 40 (133)
T PF15050_consen 3 WWRDNFWIILAVAIILVSVVLGLILYCVCRWQLRQGKK 40 (133)
T ss_pred hHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 3777777665554432 11112222225677776643
No 341
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=30.52 E-value=21 Score=27.60 Aligned_cols=18 Identities=17% Similarity=0.200 Sum_probs=8.4
Q ss_pred HHHHHhhHHHHHHHHHHH
Q 016882 214 RYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 214 ~~~f~i~~~~~~~~~~~~ 231 (381)
||++++..++.+++++++
T Consensus 1 RW~l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFL 18 (130)
T ss_pred CeeeHHHHHHHHHHHHHH
Confidence 455555544444433333
No 342
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=30.03 E-value=1.6e+02 Score=23.04 Aligned_cols=28 Identities=11% Similarity=-0.104 Sum_probs=20.4
Q ss_pred HHhhCCcccchhHHhHHHHHHHHHHHHH
Q 016882 172 IAETAPTPMRGQLISLKEFFIVLGMVGG 199 (381)
Q Consensus 172 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 199 (381)
+.|++|+..|....+.+........-+.
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~~~ 87 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKSLF 87 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999988888776555444333
No 343
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=29.94 E-value=3.4e+02 Score=23.95 Aligned_cols=15 Identities=33% Similarity=0.302 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHh
Q 016882 106 GALIGSILAFNIADI 120 (381)
Q Consensus 106 ~~~~~~~~~g~l~d~ 120 (381)
...++.++..-+.||
T Consensus 70 ~~SiSmI~vsEiGDK 84 (294)
T KOG2881|consen 70 TASISMIFVSEIGDK 84 (294)
T ss_pred HHhhheeeeeeccch
Confidence 333444444444444
No 344
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=29.32 E-value=95 Score=17.14 Aligned_cols=12 Identities=8% Similarity=-0.069 Sum_probs=7.2
Q ss_pred HHHHhhcccchh
Q 016882 228 GMGMWWLPASPR 239 (381)
Q Consensus 228 ~~~~~~~~~~~~ 239 (381)
+....+++|+|+
T Consensus 17 iFFAIfFRepPr 28 (31)
T PRK11875 17 LFFAIAFRDPPK 28 (31)
T ss_pred HHHhhhccCCCC
Confidence 334455778775
No 345
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=29.27 E-value=2.3e+02 Score=20.79 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHhhcccc---hhHHHHHhhHHH
Q 016882 191 FIVLGMVGGYGIGSLLVDLVA---GWRYMYGASTPL 223 (381)
Q Consensus 191 ~~~~g~~~~~~~~~~l~~~~~---~w~~~f~i~~~~ 223 (381)
...+..++|..++-++=..++ .|..+|++.++.
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 334444555566666554442 244444444444
No 346
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=28.92 E-value=94 Score=23.02 Aligned_cols=47 Identities=19% Similarity=0.107 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 016882 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (381)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~ 141 (381)
..|=..+++.-.+++.++++++..|+.-+-+.=.+|..+..++..+.
T Consensus 55 ~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 55 AFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred cchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 45666788888899999999999999888777677766665555443
No 347
>PRK11469 hypothetical protein; Provisional
Probab=28.83 E-value=3.4e+02 Score=22.54 Aligned_cols=50 Identities=16% Similarity=0.275 Sum_probs=28.1
Q ss_pred cCChhHHHHHHHHHHHHHH-HHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 016882 90 DLSSVEIGLITSGSLYGAL-IGSILAFNIADILGRRRELILAALLYLVGAL 139 (381)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~ 139 (381)
|.+.-.......+..+... .|..++.++.+++|+|.-++-|.++..++.-
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344344444444444333 3333555566778888877777777766643
No 348
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=28.77 E-value=4e+02 Score=23.31 Aligned_cols=57 Identities=9% Similarity=0.025 Sum_probs=30.9
Q ss_pred HhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHH
Q 016882 143 LAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (381)
Q Consensus 143 ~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 203 (381)
++.|..-.+.+-...|+.... ....-......| +|.....+...++.+|..+-..+.
T Consensus 30 LS~s~~FyY~sg~~lGv~~s~--li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~~~~ 86 (249)
T PF10225_consen 30 LSRSVLFYYSSGISLGVLASL--LILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQQLW 86 (249)
T ss_pred hccChhHHHhhhHHHHHHHHH--HHHHHHHHHHcc--CcchhHHHHhhhhHHHHHHHHHHH
Confidence 455655566666666664332 223344577888 455555555555555554444443
No 349
>PF14851 FAM176: FAM176 family
Probab=27.29 E-value=1.9e+02 Score=23.17 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=24.0
Q ss_pred hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhC
Q 016882 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (381)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 176 (381)
...-+.-+.+.|+.|+|.|....++...+.=.+
T Consensus 15 I~~~PE~~aLYFv~gVC~GLlLtLcllV~risc 47 (153)
T PF14851_consen 15 IRDNPERFALYFVSGVCAGLLLTLCLLVIRISC 47 (153)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 345566777889999999988888776544444
No 350
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.27 E-value=2e+02 Score=21.47 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=21.5
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhhHhHH
Q 016882 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (381)
++.++=-++++-++.++...+.|+|.|.....
T Consensus 62 iG~llD~~agTsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 62 IGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 44555556666666677778999998865543
No 351
>PRK02237 hypothetical protein; Provisional
Probab=27.25 E-value=1.6e+02 Score=21.92 Aligned_cols=47 Identities=23% Similarity=0.166 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 016882 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (381)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~ 141 (381)
..|=..+++.-.+++.++++++..|+.-+-+.=.+|..+..++..+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 36777888888999999999999999887766666666655555443
No 352
>PF06706 CTV_P6: Citrus tristeza virus 6-kDa protein; InterPro: IPR009584 This family consists of several Citrus tristeza virus (CTV) 6 kDa, 51 residue long hydrophobic (P6) proteins. The function of this family is unknown.
Probab=26.48 E-value=1.1e+02 Score=18.30 Aligned_cols=23 Identities=22% Similarity=0.251 Sum_probs=14.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHhcC
Q 016882 359 GSCTLFFMSNVYFFCICISYLII 381 (381)
Q Consensus 359 i~~~~~~~~~~~~~~~~~~~~~~ 381 (381)
+-+++.++.+.++|+.+..++++
T Consensus 5 IQGfLT~LvG~~VF~AF~~~iiI 27 (51)
T PF06706_consen 5 IQGFLTFLVGIAVFKAFAALIII 27 (51)
T ss_pred HHHHHHHHHHHHHHHHHHHHhEE
Confidence 34455666677777777776653
No 353
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=26.20 E-value=2.5e+02 Score=26.25 Aligned_cols=16 Identities=6% Similarity=0.050 Sum_probs=11.8
Q ss_pred HHhhchHHHHHHHHHH
Q 016882 118 ADILGRRRELILAALL 133 (381)
Q Consensus 118 ~d~~Grk~~l~~~~~~ 133 (381)
.||+...|++...+-+
T Consensus 208 ~e~ft~sKllav~~si 223 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSI 223 (416)
T ss_pred cchhhHHHHHHHHHhh
Confidence 8999998887654443
No 354
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=26.11 E-value=1.9e+02 Score=20.31 Aligned_cols=17 Identities=24% Similarity=0.538 Sum_probs=9.8
Q ss_pred hHHHHHHHHHHHHHHHH
Q 016882 123 RRRELILAALLYLVGAL 139 (381)
Q Consensus 123 rk~~l~~~~~~~~~~~~ 139 (381)
||...++|.++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMV 19 (89)
T ss_pred chhhHHHhhHHHHHhHH
Confidence 55666666666555543
No 355
>PTZ00370 STEVOR; Provisional
Probab=25.96 E-value=1.4e+02 Score=26.47 Aligned_cols=24 Identities=21% Similarity=0.141 Sum_probs=16.1
Q ss_pred hhHHHHHhhHHHHHHHHHHHhhcc
Q 016882 212 GWRYMYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~~~~~~~~~~ 235 (381)
.|-.+-++..++.++.+++++|+.
T Consensus 256 Pygiaalvllil~vvliilYiwly 279 (296)
T PTZ00370 256 PYGIAALVLLILAVVLIILYIWLY 279 (296)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666777777777777766653
No 356
>PRK14231 camphor resistance protein CrcB; Provisional
Probab=25.60 E-value=3.2e+02 Score=21.11 Aligned_cols=24 Identities=17% Similarity=0.091 Sum_probs=14.6
Q ss_pred HHHHHHHHhhHhHHHHHHHHhhCC
Q 016882 154 RFVFGIGIGLAMHAAPMYIAETAP 177 (381)
Q Consensus 154 r~l~G~~~g~~~~~~~~~~~~~~~ 177 (381)
|.+.+.|.-+.+....++..|...
T Consensus 62 ~~~l~tGflGgfTTFSTf~~e~~~ 85 (129)
T PRK14231 62 LNGIGTGFIGAFTTFSAFSVDTIQ 85 (129)
T ss_pred HHHHHhHHhcccccHHHHHHHHHH
Confidence 444555555566667777777654
No 357
>PRK14233 camphor resistance protein CrcB; Provisional
Probab=25.46 E-value=3.3e+02 Score=21.20 Aligned_cols=24 Identities=4% Similarity=0.043 Sum_probs=16.8
Q ss_pred HHHHHHHHhhHhHHHHHHHHhhCC
Q 016882 154 RFVFGIGIGLAMHAAPMYIAETAP 177 (381)
Q Consensus 154 r~l~G~~~g~~~~~~~~~~~~~~~ 177 (381)
|.+.+.|..+.+....++..|...
T Consensus 70 ~~~l~tGf~GgfTTFSTf~~E~~~ 93 (133)
T PRK14233 70 HEFIMVGLLGGYTTVSSFCLQSVN 93 (133)
T ss_pred HHHHHHHHccccccHHHHHHHHHH
Confidence 455566666677778888888764
No 358
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=25.38 E-value=1.6e+02 Score=25.20 Aligned_cols=22 Identities=9% Similarity=-0.003 Sum_probs=11.7
Q ss_pred hhHHHHHhhHHHHHHHHHHHhh
Q 016882 212 GWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
++.|.+++.+++..+.+..+.|
T Consensus 50 ~~~~~~~i~gi~~g~l~am~vl 71 (224)
T PF13829_consen 50 GSWWYWLIIGILLGLLAAMIVL 71 (224)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH
Confidence 4446666666665554444443
No 359
>CHL00031 psbT photosystem II protein T
Probab=25.36 E-value=1e+02 Score=17.27 Aligned_cols=13 Identities=8% Similarity=0.059 Sum_probs=7.7
Q ss_pred HHHHhhcccchhH
Q 016882 228 GMGMWWLPASPRW 240 (381)
Q Consensus 228 ~~~~~~~~~~~~~ 240 (381)
+....+++|+|+.
T Consensus 17 lFFAI~FRePPri 29 (33)
T CHL00031 17 IFFAIFFREPPKV 29 (33)
T ss_pred HHHhheecCCCCC
Confidence 3344557888763
No 360
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=24.77 E-value=95 Score=20.15 Aligned_cols=22 Identities=23% Similarity=0.244 Sum_probs=17.8
Q ss_pred hhHHHHHhhHHHHHHHHHHHhh
Q 016882 212 GWRYMYGASTPLAVIMGMGMWW 233 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~~~~~~~~ 233 (381)
|||...++.++++++.+.++-.
T Consensus 4 g~r~~~~~ggfVg~iG~a~Ypi 25 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALYPI 25 (58)
T ss_pred cccchhhHHHHHHHHHHHHhhh
Confidence 8999999999998887665543
No 361
>PRK03818 putative transporter; Validated
Probab=24.73 E-value=7e+02 Score=24.83 Aligned_cols=82 Identities=12% Similarity=0.013 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHhhHhHHHHHH
Q 016882 93 SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHAAPMY 171 (381)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (381)
-.+.|+..-++.+|...|.-+..-+.+..|.+..+ ++.++..+..++.... .-..-+-..+.+-.++.+...+....+
T Consensus 434 l~~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~ 512 (552)
T PRK03818 434 LRELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAF 512 (552)
T ss_pred HHHHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHH
Confidence 34566666667777777776666555555655544 4444443333322222 111111112223334445555666677
Q ss_pred HHhh
Q 016882 172 IAET 175 (381)
Q Consensus 172 ~~~~ 175 (381)
..|.
T Consensus 513 a~~~ 516 (552)
T PRK03818 513 ANNL 516 (552)
T ss_pred Hhcc
Confidence 7774
No 362
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.37 E-value=1e+03 Score=26.45 Aligned_cols=38 Identities=16% Similarity=0.161 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhHHHHHhhHHHHHHHHHHH
Q 016882 190 FFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 190 ~~~~~g~~~~~~~~~~l~~~~~~w~~~f~i~~~~~~~~~~~~ 231 (381)
....+..+++.++.+++ .+|+...+..+...++++...
T Consensus 152 ~i~~~~~fi~g~ii~F~----~~W~Ltlv~l~~~Pli~~~g~ 189 (1228)
T KOG0055|consen 152 FIQLLATFIAGFVIGFY----YGWKLTLVMLSFIPLIAIAGG 189 (1228)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 33444445554444444 499998887776666544433
No 363
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=24.06 E-value=5.4e+02 Score=23.29 Aligned_cols=98 Identities=10% Similarity=-0.079 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH-HHHHHH-hchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchh
Q 016882 106 GALIGSILAFNIADILGRRRELILAALLYLVG-ALVTAL-APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQ 183 (381)
Q Consensus 106 ~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~-~~~~~~-~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~ 183 (381)
.-.+..-+++.+++|-|.-+.=+=|+.+.+.. .....+ ..++|.=++.-.+. |........+.......++--.
T Consensus 19 tPLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~gl~~a~l~----g~l~~ll~a~~ti~l~~nqiis 94 (304)
T COG1079 19 TPLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLGLLAAALV----GALFGLLHAFLTIKLRANQIIS 94 (304)
T ss_pred HHHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHHHHHHHHH----HHHHHHHHHHHHHhhccccchh
Confidence 33455557788899988654433333222221 112222 34555544444444 4455556667777777788888
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhh
Q 016882 184 LISLKEFFIVLGMVGGYGIGSLLV 207 (381)
Q Consensus 184 ~~~~~~~~~~~g~~~~~~~~~~l~ 207 (381)
..++.-.+.++...++..+.+.-.
T Consensus 95 G~alnl~a~Glt~fl~~~~~~~~~ 118 (304)
T COG1079 95 GLALNLLASGLTAFLGQSIFGQPG 118 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC
Confidence 888888888888887777766553
No 364
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=23.95 E-value=2.1e+02 Score=22.51 Aligned_cols=24 Identities=13% Similarity=0.138 Sum_probs=18.1
Q ss_pred HHhhCCcccchhHHhHHHHHHHHH
Q 016882 172 IAETAPTPMRGQLISLKEFFIVLG 195 (381)
Q Consensus 172 ~~~~~~~~~r~~~~~~~~~~~~~g 195 (381)
+.|++|+..|....+.+.......
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 579999999998887766554443
No 365
>PRK15049 L-asparagine permease; Provisional
Probab=23.85 E-value=6.9e+02 Score=24.39 Aligned_cols=20 Identities=15% Similarity=0.298 Sum_probs=9.9
Q ss_pred hhHHHHHhhHHHHHHHHHHH
Q 016882 212 GWRYMYGASTPLAVIMGMGM 231 (381)
Q Consensus 212 ~w~~~f~i~~~~~~~~~~~~ 231 (381)
+.|+...+..+..++..+.+
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~ 465 (499)
T PRK15049 446 NGTYTIAALPIIGILLVIGW 465 (499)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 45666555554444444433
No 366
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=23.44 E-value=5.1e+02 Score=22.77 Aligned_cols=11 Identities=9% Similarity=0.006 Sum_probs=6.0
Q ss_pred hhHHHHHhhHH
Q 016882 212 GWRYMYGASTP 222 (381)
Q Consensus 212 ~w~~~f~i~~~ 222 (381)
.||+.+.+..+
T Consensus 192 ~Rr~~~v~~~i 202 (258)
T PRK10921 192 KRPYVLVGAFV 202 (258)
T ss_pred cCcHHhHHHHH
Confidence 56766554433
No 367
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=22.81 E-value=4.4e+02 Score=21.78 Aligned_cols=55 Identities=15% Similarity=0.144 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Q 016882 102 GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGI 159 (381)
Q Consensus 102 ~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 159 (381)
...+...+.+++.-.+..|.++|-.+.+..++.++..++.+ ..|...+.-.+.|+
T Consensus 36 ~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G---~~~~~~~~~iv~gl 90 (186)
T PF09605_consen 36 MPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG---HGWPMLIVCIVGGL 90 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHH
Confidence 44556667778888889999999998877766665544333 22444444444443
No 368
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=22.39 E-value=7.2e+02 Score=24.09 Aligned_cols=28 Identities=18% Similarity=0.309 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhchHHHH
Q 016882 123 RRRELILAALLYLVGALVTALAPDFIIM 150 (381)
Q Consensus 123 rk~~l~~~~~~~~~~~~~~~~~~~~~~~ 150 (381)
.|+...-.++.+.++.+..++.+++...
T Consensus 340 ~~~~~~~~~~t~~~sa~WHG~~~gYyl~ 367 (465)
T PLN02332 340 KKPGFFQLLATQTVSAVWHGLYPGYILF 367 (465)
T ss_pred cchhHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 3444444445555667777777665443
No 369
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=22.36 E-value=1.9e+02 Score=26.66 Aligned_cols=42 Identities=24% Similarity=0.260 Sum_probs=36.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 016882 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (381)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~ 133 (381)
.-.+++..+..+.++.++.+.+.|.|..++||-+.+..+.+.
T Consensus 308 Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv 349 (390)
T KOG3097|consen 308 GVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVV 349 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHH
Confidence 356789999999999999999999999999999888776554
No 370
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.72 E-value=1.1e+03 Score=26.09 Aligned_cols=22 Identities=18% Similarity=0.415 Sum_probs=15.9
Q ss_pred chhHHHHHhhHHHHHHHHHHHh
Q 016882 211 AGWRYMYGASTPLAVIMGMGMW 232 (381)
Q Consensus 211 ~~w~~~f~i~~~~~~~~~~~~~ 232 (381)
.+||.+.+..+...++++..+.
T Consensus 806 ~~W~lalv~la~~Pll~~~~~~ 827 (1228)
T KOG0055|consen 806 YGWRLALVVLATFPLLILSGYL 827 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3999998888877776555444
No 371
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=21.60 E-value=2.9e+02 Score=19.72 Aligned_cols=31 Identities=19% Similarity=0.465 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhhCC
Q 016882 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (381)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~ 177 (381)
-+=++++|.+.|-+.+..-........|.-|
T Consensus 31 t~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~p 61 (89)
T PF04550_consen 31 TLRLFIGRVILGSAVSVVAGAALIQFPDLPP 61 (89)
T ss_pred chhHHhHHHHHhhHHHHHHHHHHhcCCCCCH
Confidence 4567788888887666555554444444444
No 372
>PLN02878 homogentisate phytyltransferase
Probab=21.58 E-value=5.9e+02 Score=22.77 Aligned_cols=73 Identities=15% Similarity=0.157 Sum_probs=36.7
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHH
Q 016882 120 ILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIV 193 (381)
Q Consensus 120 ~~Grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 193 (381)
|+|+|++..++..+..++.....+..-.........+...|....... .-+=+...+.+.+.....+++..+.
T Consensus 195 ~lG~~~~~~i~~~ll~~aY~~~i~~g~~~~~~~~~~~~~~~h~~l~~~-L~~rs~~vD~~sk~~i~~fY~fiwk 267 (280)
T PLN02878 195 RLGQKRVFWLCVNLLEMAYAAAILVGASSSFLWSKIITVLGHGILASI-LWQRAQSVDLSSKAAITSFYMFIWK 267 (280)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH-HHHHhHhcCcccHHHHHHHHHHHHH
Confidence 488888888877776666553333221112223334444444433222 2222344455566666666665543
No 373
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=21.44 E-value=4.6e+02 Score=27.35 Aligned_cols=46 Identities=22% Similarity=0.124 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhhCCcccchhHHhHHHHHHHHHH
Q 016882 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGM 196 (381)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 196 (381)
++++-...|.+.|....+...++.-+.... -...++++.++.-+++
T Consensus 186 vl~~a~~gG~~~Gaa~Gv~~Gli~~l~~~~-~~~~~~~~af~GLlaG 231 (764)
T TIGR02865 186 VLLISYIGGSGAGAAGGVVIGVILGLANNA-NLYQIGVFGFAGLLGG 231 (764)
T ss_pred HHHHHHhcCchHhHHHHHHHHHHHHhcCcc-HHHHHHHHHHHHHHHH
Confidence 334444556666665555555555554322 2344555554444433
No 374
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=21.26 E-value=8.3e+02 Score=24.39 Aligned_cols=84 Identities=15% Similarity=0.128 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhch-HHHHHHHHHHHHHHHhhHhHHHHHHH
Q 016882 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD-FIIMVVGRFVFGIGIGLAMHAAPMYI 172 (381)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grk~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~r~l~G~~~g~~~~~~~~~~ 172 (381)
.+.|+..-++.+|...|.-+..-+.. .|-+..+ ++.++..+..++..+..- +.-+-....+-.++.+...+....+.
T Consensus 450 ~~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a 527 (562)
T TIGR03802 450 KDLGLALFIAVVGLSAGPQAVTAIKE-MGLTLFL-LGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAV 527 (562)
T ss_pred HHHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHH
Confidence 35777788888888888877777643 5555544 444444443332222111 10011111222233445566666777
Q ss_pred HhhCCcc
Q 016882 173 AETAPTP 179 (381)
Q Consensus 173 ~~~~~~~ 179 (381)
.|..+.+
T Consensus 528 ~~~~~~~ 534 (562)
T TIGR03802 528 LERAGSS 534 (562)
T ss_pred HHhcCCC
Confidence 7776543
No 375
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=20.89 E-value=4e+02 Score=26.30 Aligned_cols=32 Identities=16% Similarity=0.114 Sum_probs=21.2
Q ss_pred CcccchhHHhHHHHHHHHHHHHHHHHHHHhhc
Q 016882 177 PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (381)
Q Consensus 177 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 208 (381)
.+++||..+...-..+.+++.++...++.+..
T Consensus 291 ~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 291 SPNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34666777766666667777777777666664
No 376
>PRK14220 camphor resistance protein CrcB; Provisional
Probab=20.73 E-value=3.9e+02 Score=20.34 Aligned_cols=25 Identities=12% Similarity=0.013 Sum_probs=16.7
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhhCC
Q 016882 153 GRFVFGIGIGLAMHAAPMYIAETAP 177 (381)
Q Consensus 153 ~r~l~G~~~g~~~~~~~~~~~~~~~ 177 (381)
.|.+.+.|.-+.+....++..|...
T Consensus 61 ~~~~l~tGf~GgfTTFSTf~~e~~~ 85 (120)
T PRK14220 61 IYALLGTGVLGGYTTFSTLNTELVS 85 (120)
T ss_pred HHHHHHHHHccccccHHHHHHHHHH
Confidence 3555566666677777777777664
No 377
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=20.37 E-value=9.7e+02 Score=24.81 Aligned_cols=139 Identities=14% Similarity=0.076 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc---hH---HHHHHHHHHHHHHHHHHHHhchHHHHHHH-HHHHHHHHhhHhHH
Q 016882 95 EIGLITSGSLYGALIGSILAFNIADILG---RR---RELILAALLYLVGALVTALAPDFIIMVVG-RFVFGIGIGLAMHA 167 (381)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~d~~G---rk---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-r~l~G~~~g~~~~~ 167 (381)
++-+..-+..+...+++++.-.+.|+.= .+ .++.+++++.++.-.++.+..++...... |.=.++..... --
T Consensus 158 ~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~-~h 236 (709)
T COG2274 158 EVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFF-RH 236 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HH
Confidence 3334444455566677778888889862 22 22334444444444444444444333322 22233333322 22
Q ss_pred HHHHHHhhCCcccchhHHhHHHHHHHHHHHHHHHHH------------HHhhcccchhHHHHHhhHHHHHHHHHHHhhcc
Q 016882 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG------------SLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (381)
Q Consensus 168 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~------------~~l~~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 235 (381)
..-.-..+++.+.-|-..+=..-...+=.++...+- ..+.-.+ +|..+++..+.+.+..++.+++.|
T Consensus 237 ll~Lpl~~f~~r~~Ge~~sR~~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~y-s~~L~li~l~~~~l~~l~~~~~~~ 315 (709)
T COG2274 237 LLRLPLSYFEKRSVGEIISRVRELEQIREFLTGSILTLIIDLLFALIFLAVMFLY-SWKLTLIVLAAIPLNVLITLIFQP 315 (709)
T ss_pred HHcCcHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233334566655555544443333322222222222 2222233 676666655555555544444433
No 378
>PLN02776 prenyltransferase
Probab=20.25 E-value=6.9e+02 Score=23.08 Aligned_cols=25 Identities=12% Similarity=0.131 Sum_probs=14.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhch
Q 016882 122 GRRRELILAALLYLVGALVTALAPD 146 (381)
Q Consensus 122 Grk~~l~~~~~~~~~~~~~~~~~~~ 146 (381)
.++..+.++.++..++..+..+..|
T Consensus 74 s~~~A~~~~~~l~~~g~~~l~~~~n 98 (341)
T PLN02776 74 SVPHAVAWAVVVGAAGVALLAYKTN 98 (341)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4456666776666666544444334
Done!